Query 046746
Match_columns 561
No_of_seqs 218 out of 1847
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 06:37:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046746.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046746hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-100 4E-105 836.4 57.6 504 26-550 1-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.1E-96 4E-101 798.2 53.5 476 26-550 65-565 (580)
3 1v10_A Laccase; multicopper bl 100.0 1.4E-96 5E-101 797.4 49.5 483 24-553 19-515 (521)
4 1zpu_A Iron transport multicop 100.0 6.1E-96 2E-100 793.3 54.4 470 27-546 1-500 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 3.1E-95 1.1E-99 778.6 53.4 474 29-549 5-491 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 1.4E-94 4.7E-99 773.5 53.2 475 29-553 4-495 (499)
7 1hfu_A Laccase 1; oxidoreducta 100.0 9E-93 3.1E-97 765.2 50.6 471 30-552 6-493 (503)
8 2q9o_A Laccase-1; multicopper 100.0 4.2E-92 1.4E-96 768.0 50.5 485 24-552 29-546 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 1.3E-86 4.4E-91 706.5 41.8 402 25-527 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.3E-85 1.1E-89 696.4 34.4 403 27-530 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 4.6E-83 1.6E-87 691.2 39.2 418 27-530 35-477 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 4E-82 1.4E-86 672.7 42.5 407 24-527 46-480 (481)
13 2wsd_A Spore coat protein A; o 100.0 1.8E-81 6.1E-86 678.7 41.3 425 27-529 24-511 (513)
14 3aw5_A Multicopper oxidase; be 100.0 2E-81 6.8E-86 666.3 31.2 390 28-527 20-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 7.2E-80 2.4E-84 684.5 43.6 443 25-531 29-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 2.3E-79 7.7E-84 651.1 37.7 414 25-526 14-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.2E-77 4E-82 653.5 45.1 439 26-530 30-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 7.6E-54 2.6E-58 497.0 40.8 392 22-463 15-488 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 4.3E-53 1.5E-57 429.2 30.7 267 27-311 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 4.7E-56 1.6E-60 495.9 3.6 244 27-293 45-314 (742)
21 2zwn_A Two-domain type laccase 100.0 9.9E-52 3.4E-56 423.7 32.6 267 27-311 2-279 (339)
22 2dv6_A Nitrite reductase; elec 100.0 3.5E-50 1.2E-54 429.1 26.4 398 23-531 23-436 (447)
23 3kw8_A Laccase, putative coppe 100.0 1.5E-49 5E-54 396.0 26.3 123 23-149 2-142 (276)
24 3t9w_A Small laccase, multi-co 100.0 1.8E-49 6.3E-54 399.1 26.3 140 21-170 22-179 (299)
25 3tas_A Small laccase, multi-co 100.0 5.1E-49 1.8E-53 398.9 28.4 138 22-170 7-163 (313)
26 1kbv_A ANIA, major outer membr 100.0 1.3E-48 4.5E-53 398.5 29.4 267 24-311 34-309 (327)
27 3gdc_A Multicopper oxidase; be 100.0 6.9E-47 2.4E-51 379.0 28.7 237 25-293 31-273 (288)
28 2j5w_A Ceruloplasmin, ferroxid 100.0 6E-47 2E-51 439.3 20.1 396 45-531 616-1061(1065)
29 3cg8_A Laccase; oxidoreductase 100.0 7E-46 2.4E-50 379.8 25.1 134 25-169 45-197 (343)
30 2zoo_A Probable nitrite reduct 100.0 3.5E-45 1.2E-49 389.6 28.9 269 23-312 23-300 (442)
31 1mzy_A Copper-containing nitri 100.0 1.1E-44 3.7E-49 371.3 25.4 270 23-311 27-320 (333)
32 1oe1_A Dissimilatory copper-co 100.0 6.3E-44 2.2E-48 366.3 26.4 269 25-312 29-321 (336)
33 2bw4_A Copper-containing nitri 100.0 7.4E-44 2.5E-48 366.4 24.9 271 23-312 33-327 (340)
34 1sdd_B Coagulation factor V; c 100.0 2.6E-40 8.9E-45 367.5 25.6 263 25-309 3-327 (647)
35 1sdd_A Coagulation factor V; c 100.0 2.2E-41 7.4E-46 342.1 8.8 214 48-293 50-285 (306)
36 2dv6_A Nitrite reductase; elec 100.0 7.4E-39 2.5E-43 341.6 27.1 264 26-311 161-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 2.7E-40 9.4E-45 369.4 13.9 250 24-293 129-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 2.4E-36 8.3E-41 337.1 8.0 214 55-293 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 2.6E-29 9E-34 251.4 17.4 228 191-528 54-288 (288)
40 2zwn_A Two-domain type laccase 100.0 6.8E-28 2.3E-32 246.7 18.9 244 192-529 24-278 (339)
41 3g5w_A Multicopper oxidase typ 100.0 4.1E-28 1.4E-32 245.7 17.0 247 192-530 23-278 (318)
42 1sdd_A Coagulation factor V; c 99.9 1.2E-24 4E-29 219.5 2.6 232 194-529 52-301 (306)
43 1sdd_B Coagulation factor V; c 99.9 8.3E-22 2.8E-26 218.8 18.5 243 214-530 68-329 (647)
44 1kbv_A ANIA, major outer membr 99.9 2E-21 6.9E-26 197.7 18.0 243 192-530 59-309 (327)
45 2bw4_A Copper-containing nitri 99.9 9.8E-21 3.3E-25 194.1 19.1 257 192-530 60-326 (340)
46 2r7e_B Coagulation factor VIII 99.8 9.6E-22 3.3E-26 219.8 5.3 244 214-530 198-458 (770)
47 1mzy_A Copper-containing nitri 99.8 2.4E-19 8.3E-24 183.1 19.7 258 192-531 53-321 (333)
48 2zoo_A Probable nitrite reduct 99.8 1.9E-18 6.5E-23 183.4 18.8 247 192-531 49-300 (442)
49 1oe1_A Dissimilatory copper-co 99.8 3.2E-17 1.1E-21 167.6 21.9 257 192-531 54-321 (336)
50 2uxt_A Protein SUFI, SUFI; oxi 99.6 7.3E-15 2.5E-19 155.7 22.0 236 28-293 152-426 (451)
51 2xu9_A Laccase; oxidoreductase 99.6 6.1E-15 2.1E-19 156.0 17.5 241 28-293 146-425 (439)
52 3cvb_A Plastocyanin; cupredoxi 99.6 1.9E-16 6.7E-21 133.3 4.0 90 54-147 14-105 (105)
53 1hfu_A Laccase 1; oxidoreducta 99.6 6.5E-14 2.2E-18 150.5 17.9 259 30-293 143-455 (503)
54 1v10_A Laccase; multicopper bl 99.6 1.3E-13 4.6E-18 148.6 20.3 238 47-293 191-476 (521)
55 3kw8_A Laccase, putative coppe 99.5 4.1E-14 1.4E-18 140.2 12.9 99 50-150 157-268 (276)
56 3t6v_A Laccase; beta barrel, o 99.5 1.5E-12 5.1E-17 139.1 19.0 242 47-293 168-456 (495)
57 3zx1_A Oxidoreductase, putativ 99.5 1.9E-12 6.4E-17 137.5 19.3 242 29-293 181-466 (481)
58 2cal_A Rusticyanin; iron respi 99.4 5.5E-13 1.9E-17 119.7 11.3 98 44-146 47-154 (154)
59 1iby_A Nitrosocyanin; RED copp 99.4 8.9E-13 3.1E-17 112.1 11.0 105 29-147 2-112 (112)
60 3pxl_A Laccase; 4-copper prote 99.4 4.6E-12 1.6E-16 135.3 18.7 241 47-293 166-456 (499)
61 1zpu_A Iron transport multicop 99.4 6.2E-12 2.1E-16 135.8 19.2 242 47-293 167-466 (534)
62 1aoz_A Ascorbate oxidase; oxid 99.4 1.2E-11 4E-16 134.5 21.0 229 60-293 205-510 (552)
63 3cg8_A Laccase; oxidoreductase 99.4 2.2E-12 7.7E-17 131.5 12.2 104 50-155 198-314 (343)
64 2q9o_A Laccase-1; multicopper 99.4 2.3E-11 7.8E-16 132.2 20.3 245 47-293 195-506 (559)
65 3aw5_A Multicopper oxidase; be 99.3 2.8E-11 9.5E-16 128.0 19.4 229 29-293 138-434 (448)
66 3od3_A Blue copper oxidase CUE 99.3 1.9E-11 6.7E-16 129.7 18.2 250 29-293 151-475 (488)
67 2g23_A PHS, phenoxazinone synt 99.3 1.6E-10 5.5E-15 125.8 21.4 233 47-293 254-576 (612)
68 1fwx_A Nitrous oxide reductase 99.3 1E-11 3.6E-16 133.2 11.2 96 43-148 497-593 (595)
69 2wsd_A Spore coat protein A; o 99.2 5.9E-11 2E-15 127.8 14.3 227 47-293 230-495 (513)
70 2ov0_A Amicyanin; beta-sandwic 99.2 4.6E-11 1.6E-15 100.2 10.5 78 53-146 27-105 (105)
71 3abg_A Bilirubin oxidase; clea 99.2 1.8E-10 6.2E-15 124.2 17.1 230 47-293 201-460 (534)
72 2aan_A Auracyanin A; cupredoxi 99.2 4.4E-11 1.5E-15 105.7 7.2 94 427-527 36-139 (139)
73 3cvb_A Plastocyanin; cupredoxi 99.1 1.3E-10 4.3E-15 97.4 8.6 84 427-527 20-104 (105)
74 3sqr_A Laccase; multicopper ox 99.1 3.5E-09 1.2E-13 114.6 21.3 241 47-293 225-529 (580)
75 2gim_A Plastocyanin; beta shee 99.1 4.3E-10 1.5E-14 94.3 8.7 83 58-147 19-106 (106)
76 3tas_A Small laccase, multi-co 99.0 2.8E-09 9.4E-14 107.3 12.5 100 50-150 163-274 (313)
77 3gyr_A PHS, phenoxazinone synt 98.9 4E-08 1.4E-12 108.3 20.7 91 192-293 459-576 (612)
78 2aan_A Auracyanin A; cupredoxi 98.9 5.3E-09 1.8E-13 92.2 10.7 90 55-146 31-139 (139)
79 3t9w_A Small laccase, multi-co 98.9 4.1E-09 1.4E-13 105.3 11.1 100 50-150 179-290 (299)
80 1qhq_A Protein (auracyanin); e 98.9 2E-08 7E-13 88.5 12.6 92 55-147 29-140 (140)
81 3c75_A Amicyanin; copper prote 98.8 7.1E-09 2.4E-13 90.4 8.8 78 53-146 54-132 (132)
82 2gim_A Plastocyanin; beta shee 98.8 6.4E-09 2.2E-13 87.0 7.6 84 427-527 21-105 (106)
83 4hci_A Cupredoxin 1; structura 98.8 1.3E-08 4.6E-13 84.2 8.9 79 53-146 22-100 (100)
84 2plt_A Plastocyanin; electron 98.8 9.9E-09 3.4E-13 84.6 6.4 80 58-146 17-98 (98)
85 1pcs_A Plastocyanin; electron 98.7 1.2E-08 4E-13 84.2 4.8 81 58-146 18-98 (98)
86 1qhq_A Protein (auracyanin); e 98.7 4E-08 1.4E-12 86.6 8.0 96 427-527 34-139 (140)
87 1bxv_A Plastocyanin; copper pr 98.6 8.8E-08 3E-12 77.6 8.5 76 56-146 16-91 (91)
88 1pcs_A Plastocyanin; electron 98.6 1E-07 3.4E-12 78.5 8.5 79 427-527 20-98 (98)
89 2plt_A Plastocyanin; electron 98.6 1.1E-07 3.8E-12 78.1 8.3 80 427-527 19-98 (98)
90 1b3i_A PETE protein, protein ( 98.6 1.4E-07 4.8E-12 77.4 8.2 77 58-146 18-97 (97)
91 3erx_A Pseudoazurin; copper pr 98.6 1.5E-07 5E-12 80.6 8.5 76 58-148 20-95 (123)
92 1kdj_A Plastocyanin; electron 98.6 1.4E-07 4.6E-12 78.3 8.1 79 58-146 16-102 (102)
93 1bxv_A Plastocyanin; copper pr 98.5 2.2E-07 7.4E-12 75.2 8.0 72 427-527 20-91 (91)
94 3tu6_A Pseudoazurin (blue copp 98.5 1.5E-07 5.2E-12 81.0 7.2 77 58-149 22-98 (127)
95 1byp_A Protein (plastocyanin); 98.5 4.6E-07 1.6E-11 74.6 9.4 77 58-146 16-99 (99)
96 1plc_A Plastocyanin; electron 98.5 3.9E-07 1.3E-11 75.0 8.8 77 58-146 16-99 (99)
97 3ef4_A Pseudoazurin, blue copp 98.4 8.1E-07 2.8E-11 75.9 9.7 76 58-148 21-96 (124)
98 1b3i_A PETE protein, protein ( 98.4 2.6E-07 8.8E-12 75.8 6.0 78 427-527 20-97 (97)
99 1iby_A Nitrosocyanin; RED copp 98.4 7.6E-07 2.6E-11 75.1 8.8 74 427-528 39-112 (112)
100 1byp_A Protein (plastocyanin); 98.3 1.2E-06 4.1E-11 72.0 8.1 83 426-527 17-99 (99)
101 3ay2_A Lipid modified azurin p 98.3 7.2E-07 2.4E-11 80.2 6.5 92 55-147 54-167 (167)
102 1iuz_A Plastocyanin; electron 98.3 1.1E-06 3.8E-11 72.1 7.0 79 56-146 15-98 (98)
103 1paz_A Pseudoazurin precursor; 98.3 2.8E-06 9.6E-11 72.7 8.6 76 58-148 20-95 (123)
104 1cuo_A Protein (azurin ISO-2); 98.2 2.2E-06 7.4E-11 74.0 7.9 92 55-147 14-129 (129)
105 4hci_A Cupredoxin 1; structura 98.2 4E-06 1.4E-10 69.1 8.4 72 427-527 29-100 (100)
106 1pmy_A Pseudoazurin; electron 98.2 3.1E-06 1.1E-10 72.4 7.8 76 58-148 20-95 (123)
107 1id2_A Amicyanin; beta barrel, 98.2 9.4E-06 3.2E-10 67.6 10.5 76 55-146 30-106 (106)
108 1kdj_A Plastocyanin; electron 98.2 2E-06 6.7E-11 71.2 5.9 84 427-527 18-102 (102)
109 3sbq_A Nitrous-oxide reductase 98.1 8.1E-06 2.8E-10 86.0 8.9 96 42-147 539-637 (638)
110 2ux6_A Pseudoazurin; type-1 co 98.0 1E-05 3.6E-10 69.0 7.5 74 58-148 20-93 (122)
111 1plc_A Plastocyanin; electron 98.0 1.6E-05 5.5E-10 65.2 7.7 82 426-526 17-98 (99)
112 2ccw_A Azurin II, AZN-2; elect 98.0 1.1E-05 3.6E-10 69.6 6.4 92 55-147 14-129 (129)
113 2ov0_A Amicyanin; beta-sandwic 97.9 2.1E-05 7.2E-10 65.3 7.3 71 427-526 34-104 (105)
114 1nwp_A Azurin; electron transp 97.8 9.3E-05 3.2E-09 63.5 10.3 91 55-146 14-128 (128)
115 2iaa_C Azurin; quinoprotein, t 97.8 4.6E-05 1.6E-09 65.4 8.1 92 55-147 13-128 (128)
116 1fwx_A Nitrous oxide reductase 97.8 5.4E-05 1.8E-09 81.4 9.7 75 427-530 514-594 (595)
117 2cal_A Rusticyanin; iron respi 97.8 9.9E-05 3.4E-09 65.7 9.5 83 426-526 61-153 (154)
118 3ef4_A Pseudoazurin, blue copp 97.2 0.00079 2.7E-08 57.3 7.4 75 427-530 23-97 (124)
119 1id2_A Amicyanin; beta barrel, 97.2 0.00093 3.2E-08 55.3 7.3 71 427-526 35-105 (106)
120 1iuz_A Plastocyanin; electron 97.1 0.0016 5.3E-08 53.0 8.3 80 426-526 18-97 (98)
121 3tu6_A Pseudoazurin (blue copp 97.1 0.00065 2.2E-08 58.1 5.8 75 427-530 24-98 (127)
122 3fsa_A Azurin; copper, cupredo 97.1 0.0035 1.2E-07 52.9 9.9 86 55-146 14-125 (125)
123 3erx_A Pseudoazurin; copper pr 97.0 0.0016 5.4E-08 55.4 7.4 74 427-529 22-95 (123)
124 3c75_A Amicyanin; copper prote 97.0 0.0016 5.4E-08 56.2 7.5 72 427-527 61-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.7 0.0081 2.8E-07 51.9 9.7 75 59-147 60-135 (135)
126 3s8f_B Cytochrome C oxidase su 96.3 0.019 6.4E-07 51.3 9.7 81 53-147 87-168 (168)
127 1paz_A Pseudoazurin precursor; 96.1 0.012 4.2E-07 49.8 7.0 37 489-529 59-95 (123)
128 3sbq_A Nitrous-oxide reductase 96.0 0.024 8.4E-07 59.9 9.8 76 426-528 558-637 (638)
129 1pmy_A Pseudoazurin; electron 95.9 0.012 4.1E-07 49.9 6.2 37 489-529 59-95 (123)
130 2cua_A Protein (CUA); CUA cent 95.2 0.067 2.3E-06 46.0 8.4 72 428-527 62-134 (135)
131 3ay2_A Lipid modified azurin p 95.2 0.044 1.5E-06 48.9 7.3 91 427-527 59-166 (167)
132 2ux6_A Pseudoazurin; type-1 co 95.1 0.037 1.3E-06 46.8 6.3 71 427-528 22-92 (122)
133 1cuo_A Protein (azurin ISO-2); 94.5 0.14 4.7E-06 43.6 8.3 91 427-527 19-128 (129)
134 3s8f_B Cytochrome C oxidase su 93.8 0.25 8.5E-06 44.0 8.9 72 428-527 95-167 (168)
135 2iaa_C Azurin; quinoprotein, t 93.3 0.22 7.6E-06 42.3 7.4 91 427-527 18-127 (128)
136 2ccw_A Azurin II, AZN-2; elect 92.3 0.42 1.4E-05 40.6 7.7 91 427-527 19-128 (129)
137 1nwp_A Azurin; electron transp 92.2 0.45 1.5E-05 40.3 7.8 92 427-526 19-127 (128)
138 3fsa_A Azurin; copper, cupredo 87.0 0.77 2.6E-05 38.6 5.0 93 426-526 18-124 (125)
139 3isy_A Bsupi, intracellular pr 85.1 6.4 0.00022 32.7 9.6 71 221-292 16-101 (120)
140 1cyx_A CYOA; electron transpor 73.3 5 0.00017 36.6 5.7 76 427-530 42-119 (205)
141 3isy_A Bsupi, intracellular pr 70.3 45 0.0015 27.5 11.1 72 47-129 22-99 (120)
142 3hb3_B Cytochrome C oxidase su 65.1 12 0.00042 36.3 6.8 78 426-531 189-267 (298)
143 2gsm_B Cytochrome C oxidase su 61.5 14 0.00049 35.1 6.5 77 426-530 171-248 (262)
144 1cyx_A CYOA; electron transpor 56.6 42 0.0014 30.5 8.4 61 215-294 41-101 (205)
145 1yew_A Particulate methane mon 52.6 46 0.0016 32.8 8.4 18 103-120 319-336 (382)
146 2r39_A FIXG-related protein; s 52.3 36 0.0012 27.7 6.8 46 224-279 34-81 (118)
147 1v54_B Cytochrome C oxidase po 52.2 21 0.00071 33.2 5.8 78 425-530 139-217 (227)
148 1jer_A Cucumber stellacyanin; 49.1 19 0.00065 30.6 4.6 34 498-531 77-111 (138)
149 2f1e_A Protein APAG; APAG prot 46.4 19 0.00065 30.1 4.1 47 70-116 34-86 (127)
150 2gsm_B Cytochrome C oxidase su 44.1 62 0.0021 30.6 7.8 76 59-148 171-247 (262)
151 1xvs_A Protein APAG; MCSG APC2 43.6 19 0.00064 30.1 3.6 48 70-117 33-86 (126)
152 1xwv_A DER F II; beta sheets, 42.8 39 0.0013 28.1 5.6 62 58-119 24-93 (129)
153 1xq4_A Protein APAG; all beta 40.8 25 0.00086 29.8 4.0 48 70-117 38-91 (139)
154 1nep_A EPV20, BNPC2, epididyma 40.6 42 0.0014 28.0 5.4 61 59-119 26-95 (130)
155 1tza_A APAG protein, SOR45; st 37.4 22 0.00075 30.0 3.1 48 70-117 33-86 (134)
156 1fft_B Ubiquinol oxidase; elec 33.6 33 0.0011 33.5 4.1 76 427-530 152-229 (315)
157 3hb3_B Cytochrome C oxidase su 33.6 82 0.0028 30.4 6.9 76 59-148 189-265 (298)
158 3rfr_A PMOB; membrane, oxidore 31.5 1.1E+02 0.0039 30.4 7.5 16 105-120 353-368 (419)
159 1v54_B Cytochrome C oxidase po 28.0 1.4E+02 0.0048 27.5 7.2 76 58-147 139-215 (227)
160 2xzz_A Protein-glutamine gamma 27.9 55 0.0019 26.1 3.8 54 67-125 22-79 (102)
161 1x9u_A Umecyanin; cupredoxin, 25.9 67 0.0023 26.2 4.1 35 114-149 72-107 (116)
162 2h7w_A Chagasin; beta-strands, 24.4 2.9E+02 0.01 22.9 7.9 65 58-125 32-104 (131)
163 2hj1_A Hypothetical protein; s 24.1 34 0.0011 27.1 1.9 24 48-71 59-82 (97)
164 2r5o_A Putative ATP binding co 23.9 2.2E+02 0.0075 25.0 7.6 75 215-292 62-145 (188)
165 2x3c_A Toxic extracellular end 23.8 1.9E+02 0.0064 28.4 7.7 112 1-128 1-124 (343)
166 2p9r_A Alpha-2-M, alpha-2-macr 22.6 63 0.0021 25.3 3.3 68 219-292 13-84 (102)
167 1x9u_A Umecyanin; cupredoxin, 22.1 77 0.0026 25.9 3.8 33 497-529 73-106 (116)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.1e-100 Score=836.40 Aligned_cols=504 Identities=27% Similarity=0.494 Sum_probs=396.9
Q ss_pred CCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+.+|+|+|+|++..+++||.++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++|+||++++ |
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 999999999999999999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhc
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 183 (561)
|+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....+++. |+|++|+|+||+++....+...+.
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~--d~e~~l~l~Dw~~~~~~~~~~~~~ 157 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHY--DGEINLLLSDWWHQSIHKQEVGLS 157 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCC--SEEEEEEEEEECSSCHHHHHHHTT
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCC--CccceEEeecccCCCHHHHHhhhh
Confidence 999999999999997 78999999999999999999999999998655556655 789999999999987655432222
Q ss_pred CC--CCCCCCCeEEEcCccCCCCCC----------CC---CCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccE
Q 046746 184 SG--KLLGKPDGVLINGKSGRLDYD----------SD---GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK 248 (561)
Q Consensus 184 ~~--~~~~~~~~~liNG~~~~~~~~----------~~---~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 248 (561)
.. ...+.++.+||||+....|-. |. ...+..+.++|++|++|||||||+|..+.+.|+|+||+|+
T Consensus 158 ~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~ 237 (552)
T 1aoz_A 158 SKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLL 237 (552)
T ss_dssp SSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEE
T ss_pred cccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEE
Confidence 21 112357899999999622200 11 1122345899999999999999999999999999999999
Q ss_pred EEeecCcccceeeeeeEEEcccceEEEEEEe-CCCCCceEEEEEeecc-CCcceeEEEEEecCCCCC--CCCCCCCCC--
Q 046746 249 LVEMEGSHVVQNEYESLDVHVGQCFTVLVTA-NQDPKDYYLIASTRFT-RTVITTTAIVRYSDSKGL--ASPDLPKAP-- 322 (561)
Q Consensus 249 via~DG~~~~p~~~~~v~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p-- 322 (561)
|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|||++....+ .......|+|+|.+.... ...+.|..|
T Consensus 238 vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~ 317 (552)
T 1aoz_A 238 VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAW 317 (552)
T ss_dssp EEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCT
T ss_pred EEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcc
Confidence 9999999999999999999999999999999 4568999999987643 234567899999876531 111222222
Q ss_pred CCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCC
Q 046746 323 VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPE 402 (561)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~ 402 (561)
.+..... ...+. .+....+.+.+ ...++++.+.......++...|+|||++|..+..|+|.+.++++ .
T Consensus 318 ~~~~~~~--~~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~-~ 385 (552)
T 1aoz_A 318 DDFDRSK--NFTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL-L 385 (552)
T ss_dssp TCHHHHH--HHHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTC-T
T ss_pred ccccccc--ccccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcC-c
Confidence 1100000 00000 11100011111 23567777765443345667899999999988999987766554 4
Q ss_pred cccccCCCCCCC---------CcccccccccceEEecCCCcEEEEEEEcCCC------CCCceeecCCceEEEeecCCCC
Q 046746 403 EVFKYNVISDKP---------ADEIENVTLQPNVMDATYKAFMEIVLENRQN------TMQSWILDGYAFFAVGMEPGTW 467 (561)
Q Consensus 403 ~~~~~~~~~~~p---------~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~------~~HP~HlHG~~F~Vl~~~~g~~ 467 (561)
++|+.+.....+ .. +...+.++.++.++.|++|||+|+|.+. ..||||||||+||||+++.|.|
T Consensus 386 g~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~ 464 (552)
T 1aoz_A 386 HAFDQNPPPEVFPEDYDIDTPPT-NEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKF 464 (552)
T ss_dssp TSSCCSCCCSCCCTTCCTTSCCC-CTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSC
T ss_pred cccccCCCccccccccccccccc-cccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCcc
Confidence 555433221111 11 1234567788999999999999999873 4699999999999999998988
Q ss_pred CcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCcccccc
Q 046746 468 NPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCG 547 (561)
Q Consensus 468 ~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~ 547 (561)
++.....+|+.+|.|||||.|++++|++|||+|||||.|+|||||++|++.|||++|.|... +++++|++++.||
T Consensus 465 ~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~ 539 (552)
T 1aoz_A 465 SAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACG 539 (552)
T ss_dssp CGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSH
T ss_pred CcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhh
Confidence 87445578999999999999999999999999999999999999999999999999987542 4667899999998
Q ss_pred Ccc
Q 046746 548 IVA 550 (561)
Q Consensus 548 ~~~ 550 (561)
.++
T Consensus 540 ~~~ 542 (552)
T 1aoz_A 540 GTA 542 (552)
T ss_dssp HHH
T ss_pred ccC
Confidence 776
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.1e-96 Score=798.22 Aligned_cols=476 Identities=24% Similarity=0.374 Sum_probs=375.4
Q ss_pred CCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+.+|+|+|+|+++.+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.++++|||++++ |
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 46899999999999999999999999999999999999999999999999998 899999999999999999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCce-EEEecceeecchHHhhhhh
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDF-TLLIGDWYTRSHVELGKQL 182 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 182 (561)
|||+||++|+|+|++ .++||||||||.+.|+.+||+|+|||+++.. .+| |.|. +|+|+||+++...++....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y----D~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY----DEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC----SEEEEEEEEEEECSSCHHHHHHHH
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC----CccceEEEEEEEecCCHHHHHHHH
Confidence 999999999999997 5899999999999999999999999998653 234 7777 9999999998876654433
Q ss_pred cCCCCCCCCCeEEEcCccCCCCCCCCCC-------CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCc
Q 046746 183 DSGKLLGKPDGVLINGKSGRLDYDSDGK-------GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS 255 (561)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~~~~~~~~~~-------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 255 (561)
..+ ..+.++++||||+.. ++|+.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.
T Consensus 218 ~~~-~~~~~d~~liNG~~~---~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG-APPALENTLMNGTNT---FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS-CCCCBSEEEETTBCC---CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc-CCCCCceEEECCccc---CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 222 246789999999986 444221 224589999999999999999999999999999999999999999
Q ss_pred ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC----CcceeEEEEEecCCCCCCCCCCCCCCCCccccc-c
Q 046746 256 HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR----TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSL-N 330 (561)
Q Consensus 256 ~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-~ 330 (561)
+++|..+++|.|+|||||||+|++++.+|+|||++...... .....+|||+|.++... .|..+. +.. .
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~---~~~~~ 366 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVG---TTPRG 366 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCC---CCCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCC---CCccc
Confidence 99999999999999999999999998889999999865322 13467999999875421 121110 000 0
Q ss_pred cccccc-ccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeecc-CCCCchhhhhhcCCCCcccccC
Q 046746 331 QFRSFR-WNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYV-NSETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 331 ~~~~~~-~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~-~~~~P~l~~~~~~~~~~~~~~~ 408 (561)
.+.+.. ..|.+..+.+.+. ..+.++.+... .++...|+|||.+|. ++..|+|+..+.+.
T Consensus 367 ~~~~~~~~~L~P~~~~~~~~--------~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-------- 427 (580)
T 3sqr_A 367 TCEDEPVASLVPHLALDVGG--------YSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-------- 427 (580)
T ss_dssp CSCCSCGGGCCBSSCCBCCS--------EEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC--------
T ss_pred hhhcccccccccCCCCCCCC--------ccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC--------
Confidence 111110 1232222111111 12233333321 245678999999997 46788876543210
Q ss_pred CCCCCCCcccccccccceEEecC----CCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCC-CCCCCCCCCC
Q 046746 409 VISDKPADEIENVTLQPNVMDAT----YKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDK-RKSYNLIDAV 481 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~----~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~n~~~P~ 481 (561)
...| ...+++.++ .|++|||+|+|.+ ...||||||||+||||++|.|.|++.. +..+|+.||+
T Consensus 428 --~~~~--------~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~ 497 (580)
T 3sqr_A 428 --TIFP--------TEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPP 497 (580)
T ss_dssp --CCCC--------GGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCC
T ss_pred --ccCC--------CCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCc
Confidence 0111 234455554 6999999999988 789999999999999999999998754 3579999999
Q ss_pred ceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCc-cccccCcc
Q 046746 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIVA 550 (561)
Q Consensus 482 ~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 550 (561)
+|||+.|+++||++|||++||||.|+|||||++|++.||+++|.+.. ++ +++..++|++ ...|..+.
T Consensus 498 ~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~-i~~~~~~~~~~~~~C~~~~ 565 (580)
T 3sqr_A 498 RRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ-SS-IAVKMTDTAIFEDTCANWN 565 (580)
T ss_dssp EESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG-GG-CCCCHHHHHHHHHHHHHHH
T ss_pred eeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH-HH-HhhccCCcHHHHHhhHHHh
Confidence 99999999999999999999999999999999999999999998743 33 3333334555 46786553
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.4e-96 Score=797.44 Aligned_cols=483 Identities=21% Similarity=0.318 Sum_probs=372.5
Q ss_pred cCCCeEEEEEEEEEEEecCCCe-eeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQD 97 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~D 97 (561)
+.+.+.+|+|++++..+++||+ ++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++++|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 3456678999999999999999 999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCcc-CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecch
Q 046746 98 GVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSH 175 (561)
Q Consensus 98 Gv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~ 175 (561)
|++++ ||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. +.+|+. +++|++|+++||+++..
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~D~~~~~~ 177 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDV-DDASTVITIADWYHSLS 177 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCC-CCceeEEEEcccccCCH
Confidence 99997 9999999999999998789999999999999999999999999987532 234543 34799999999999876
Q ss_pred HHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCc
Q 046746 176 VELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS 255 (561)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 255 (561)
.++.. ..+...+.++.++|||+.+ |.|+......+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.
T Consensus 178 ~~~~~--~~~~~~~~~d~~liNG~~~---~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 252 (521)
T 1v10_A 178 TVLFP--NPNKAPPAPDTTLINGLGR---NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGV 252 (521)
T ss_dssp C---------CCCSCCSEEEETTBCC---CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred HHHhh--ccCCCCCCCCEEEECCccc---CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCc
Confidence 65532 1222345689999999986 444322234589999999999999999999999999999999999999999
Q ss_pred ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCcccccccc
Q 046746 256 HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQF 332 (561)
Q Consensus 256 ~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 332 (561)
+++|..++++.|+|||||||+|++++.+|+|||++....... .....++|+|.+.....+...+....+ +.
T Consensus 253 ~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~----~~-- 326 (521)
T 1v10_A 253 SHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTA----LN-- 326 (521)
T ss_dssp EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCB----CC--
T ss_pred cccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccc----cc--
Confidence 999999999999999999999999977899999998653211 122369999987653211110000000 00
Q ss_pred ccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCe-EEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCC
Q 046746 333 RSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGK-VRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVIS 411 (561)
Q Consensus 333 ~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~ 411 (561)
+..+.+....+.|.... ....++++.+.... ++. ..|+|||++|..+..|+|++.+. +.++.
T Consensus 327 ---~~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~~~~~~iNg~~~~~~~~P~l~~~~~----g~~~~---- 389 (521)
T 1v10_A 327 ---EANLIPLINPGAPGNPV---PGGADINLNLRIGR---NATTADFTINGAPFIPPTVPVLLQILS----GVTNP---- 389 (521)
T ss_dssp ---GGGCCBSSCCCCSSCSS---TTCSSEEEECCEEC---CSSSSCCEESSCCCCCCSSCHHHHHHH----TCCCG----
T ss_pred ---hhhcccCCcccCCCccc---CCcceEEEEEEEec---CCceeEEEECCCcccCCCCchhhhhhc----CCccc----
Confidence 01222211111111100 01234555544311 222 36999999999888887765432 11110
Q ss_pred CCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEe-CC
Q 046746 412 DKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV-FP 490 (561)
Q Consensus 412 ~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~v-p~ 490 (561)
.....++.++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|.|||||.| ++
T Consensus 390 -------~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 390 -------NDLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp -------GGSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBS
T ss_pred -------ccCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCC
Confidence 012345778999999999999999 7899999999999999997652 367889999999999 89
Q ss_pred CcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCC-CccccccCccCCC
Q 046746 491 NCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP-DNALLCGIVANMS 553 (561)
Q Consensus 491 ~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~ 553 (561)
++|++|||+|||||.|+|||||++|++.|||+.|.|...+ .++..++| ++.+.|..+....
T Consensus 454 gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 454 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHTHHHHHTTCC
T ss_pred CcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhhhchhhhccC
Confidence 9999999999999999999999999999999999886543 33445555 4588998887764
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-96 Score=793.32 Aligned_cols=470 Identities=23% Similarity=0.366 Sum_probs=370.0
Q ss_pred CeEEEEEEEEEEEecCCC-eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 27 PTFFFTWNVTYGTISPLG-IPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~dG-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
++|+|+|+|++..+++|| .++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++++||+|++ |
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 479999999999999999 7999999999999999999999999999999998 999999999999999999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhh-hh
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGK-QL 182 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~-~~ 182 (561)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.. +++ .|+|++|+|+||+++...++.. .+
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~--~d~e~~l~l~Dw~~~~~~~~~~~~~ 155 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYD--YDEELSLSLSEWYHDLVTDLTKSFM 155 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSC--CSEEEEEEEEEECSSCHHHHHHHHS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCC--CcceEEEEeeccccCCHHHHHHHHh
Confidence 99999999999999866899999999999999999999999999753 333 3889999999999998776543 22
Q ss_pred c---CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccce
Q 046746 183 D---SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ 259 (561)
Q Consensus 183 ~---~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 259 (561)
+ ..+..+.++.+||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 156 ~~~~~~g~~~~~d~~liNG~~~-------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 156 SVYNPTGAEPIPQNLIVNNTMN-------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp STTCTTCCCCCCSEEEETTBSS-------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred ccccCCCCCCCCceEEECCCCc-------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 2 122345789999999987 999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEcccceEEEEEEeCCC-CCceEEEEEeecc-------CCcceeEEEEEecCCCCCCCCCCCCCCCCccccccc
Q 046746 260 NEYESLDVHVGQCFTVLVTANQD-PKDYYLIASTRFT-------RTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ 331 (561)
Q Consensus 260 ~~~~~v~l~pgeR~dv~v~~~~~-~g~y~i~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 331 (561)
..+++|.|+|||||||+|++++. .++|||++..... .......++|+|.++... |..+. .. .+..
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~-~~-~~~~ 295 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNY-VD-SIDN 295 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCC-CS-CSSC
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCc-cc-cccc
Confidence 99999999999999999999864 4799999875422 113456899999875421 11000 00 0010
Q ss_pred -cccccccccccCCCCCCCCCCCcCCcCcceEEEEccceec-cCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCC
Q 046746 332 -FRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHL-VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNV 409 (561)
Q Consensus 332 -~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~ 409 (561)
..+. .+.+....+.+ ...++++.+...... .++...|+|||++|..++.|+|+..+. .+.+..
T Consensus 296 ~~~~~--~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~---~~~~~~-- 360 (534)
T 1zpu_A 296 FLDDF--YLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS---SGDQAN-- 360 (534)
T ss_dssp SCCGG--GCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT---SGGGTT--
T ss_pred ccccc--cceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc---cCcccC--
Confidence 0000 11111111111 124577766554321 345567999999999998998765432 111110
Q ss_pred CCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCC----------CCCcCCCCCCCCCC
Q 046746 410 ISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPG----------TWNPDKRKSYNLID 479 (561)
Q Consensus 410 ~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g----------~~~~~~~~~~n~~~ 479 (561)
.+. ....+++++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+
T Consensus 361 ---~~~----~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~ 432 (534)
T 1zpu_A 361 ---NSE----IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEY 432 (534)
T ss_dssp ---CGG----GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSS
T ss_pred ---CCc----ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCC
Confidence 111 1123467889999999999999999999999999999999999864 3443322222 468
Q ss_pred CCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccc--cCCCCcc-ccc
Q 046746 480 AVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDE--YNMPDNA-LLC 546 (561)
Q Consensus 480 P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~--~~~p~~~-~~c 546 (561)
|.|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|... + +++. .++|++. +.|
T Consensus 433 p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~-~~~~~~~~~p~~~~~~C 500 (534)
T 1zpu_A 433 PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF-G-IQDAHSQQLSENHLEVC 500 (534)
T ss_dssp CEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-H-HHHCGGGSCCHHHHHHH
T ss_pred CCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc-c-cccccccCCChhHhhhh
Confidence 99999999999999999999999999999999999999999999987543 2 3332 4556654 455
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=3.1e-95 Score=778.56 Aligned_cols=474 Identities=20% Similarity=0.309 Sum_probs=365.8
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC-----CeeeeeCCccCCCCCCCCCCCcc-
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE-----PFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
.+|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|.+++++||++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999975 79999999999999999999987
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+. +++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~-d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDV-DDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCGGGS---
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCC-CCceeEEEEecccCCchhhh---
Confidence 9999999999999998788999999999999999999999999986542 223544 35678999999999766432
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNE 261 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 261 (561)
.+.....++++||||++. +.|....+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..
T Consensus 161 --~~~~p~~~d~~liNG~g~---~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR---THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC---BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc---CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 112234789999999985 333222335589999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 046746 262 YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWN 338 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 338 (561)
+++|.|+|||||||+|++++.+|+|||++....... .....|+|+|.++....+.. ..+. .. .... .+..
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~--~~~~-~~--~~~~--~~~~ 308 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVT--VAST-VH--TKCL--IETD 308 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCC--CCCS-SC--SSBC--CGGG
T ss_pred eeeEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCC--CCCC-CC--cccc--cccc
Confidence 999999999999999999987899999998643221 12357999998764311110 0000 00 0000 0112
Q ss_pred ccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccc
Q 046746 339 LTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEI 418 (561)
Q Consensus 339 l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~ 418 (561)
|.+....+.|... .....++++.+.... ++. .|+|||++|..++.|+|++.+. +.+...
T Consensus 309 L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~~-~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------- 367 (495)
T 3t6v_A 309 LHPLSRNGVPGNP---HQGGADCNLNLSLGF---ACG-NFVINGVSFTPPTVPVLLQICS----GANTAA---------- 367 (495)
T ss_dssp CCBSSCCCCSSCS---STTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT----TCCSST----------
T ss_pred ccccccccCCCcc---CCCCCcEEEEEEEEe---cCc-EEEEcCEecCCCCCcchhhhhc----CCcCcc----------
Confidence 2222111111100 001245566554432 222 6999999999888998765432 211110
Q ss_pred ccccccceEEecCCCcEEEEEEE-cCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCC-CcEEEE
Q 046746 419 ENVTLQPNVMDATYKAFMEIVLE-NRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP-NCWAAI 496 (561)
Q Consensus 419 ~~~~~~~~~~~~~~g~~ve~vl~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~-~g~~~i 496 (561)
.......++.++.|++|||+|+ |.+.+.||||||||+|+||+++.. ..+|+.+|.||||+.|++ |+|++|
T Consensus 368 -~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~i 439 (495)
T 3t6v_A 368 -DLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTI 439 (495)
T ss_dssp -TSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEE
T ss_pred -cccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEE
Confidence 1123456889999999999998 677889999999999999987421 247889999999999997 899999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCc-cccccCc
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIV 549 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 549 (561)
||++||||.|+|||||++|++.||+++|.+ .+++ +++..++|++ ...|..+
T Consensus 440 rf~adnPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~-~~~~~~~p~~~~~~C~~~ 491 (495)
T 3t6v_A 440 RFCTDNPGPWFLHCHIDWHLDAGFAIVFAE-DIPN-TASANPVPEAWSNLCPSY 491 (495)
T ss_dssp EEECCSCEEEEEEESCHHHHHTTCEEEEEE-THHH-HHHHCCCCHHHHHHHHHH
T ss_pred EEEcCCCeeEEEEecchhHhhcCCeEEEEE-ChhH-hccccCCCHHHHHHhhHh
Confidence 999999999999999999999999999954 4443 3333445555 5688654
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.4e-94 Score=773.46 Aligned_cols=475 Identities=22% Similarity=0.391 Sum_probs=367.2
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC-----CeeeeeCCccCCCCCCCCCCCcc-
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE-----PFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
.+|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|.+++++||++++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999984 79999999999999999999987
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+. +++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~-d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDV-DNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCTTT----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCC-CCceEEEEEEcccCCcccc----
Confidence 9999999999999998788999999999999999999999999986532 223544 3567899999999875432
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNE 261 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 261 (561)
.+.....++++||||++. +.|. ..+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..
T Consensus 159 --~~~~p~~~d~~liNG~~~---~~~~-~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 --GPRFPGGADATLINGKGR---APSD-SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp --SCSSCSSCSEEEETTBCC---CTTC-TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred --ccCCCCCCcEEEECCCCc---CCCC-CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 122233689999999985 2221 1234589999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 046746 262 YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWN 338 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 338 (561)
+++|.|+|||||||+|++++.+|+|||++....... .....|+|+|.++.... |..+.... .... .+..
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~----p~~~~~~~--~~~~--~~~~ 304 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE----PTTNQTTS--VKPL--NEVD 304 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC----CCCCCCCC--SSBC--CGGG
T ss_pred eeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCC----CCCCCCCC--Cccc--cccc
Confidence 999999999999999999987899999998643221 12357999998764311 11110000 0000 0112
Q ss_pred ccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccc
Q 046746 339 LTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEI 418 (561)
Q Consensus 339 l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~ 418 (561)
|.+....+.|... .....++++.+.... ++. .|+|||++|..++.|+|++.+. +.+...
T Consensus 305 L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~~-~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------- 363 (499)
T 3pxl_A 305 LHPLVSTPVPGAP---SSGGVDKAINMAFNF---NGS-NFFINGASFVPPTVPVLLQILS----GAQTAQ---------- 363 (499)
T ss_dssp CCBSSCCCCSSCS---STTCSSEEEECCEEE---CSS-CEEETTBCCCCCSSCHHHHHHT----TCCSTT----------
T ss_pred ccccccccCCCcc---cCCCCcEEEEEEEEe---cCc-EEEEcCEecCCCCCchhhhhhc----CCcccc----------
Confidence 2222111111100 011245666655432 222 6999999999989998765432 211110
Q ss_pred ccccccceEEecCCCcEEEEEEE---cCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCC---Cc
Q 046746 419 ENVTLQPNVMDATYKAFMEIVLE---NRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP---NC 492 (561)
Q Consensus 419 ~~~~~~~~~~~~~~g~~ve~vl~---N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~---~g 492 (561)
.......++.++.|++|||+|+ |.+.+.||||||||+||||+++. ...+|+.+|.+|||+.|++ ++
T Consensus 364 -~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~pg~ 435 (499)
T 3pxl_A 364 -DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAAGD 435 (499)
T ss_dssp -TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGGTC
T ss_pred -ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCCCc
Confidence 1123456889999999999999 56678999999999999998742 1248889999999999997 99
Q ss_pred EEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCc-cccccCccCCC
Q 046746 493 WAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIVANMS 553 (561)
Q Consensus 493 ~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~~~~ 553 (561)
|++|||++||||.|+|||||++|++.||+++|. +.+++ +++...+|++ ...|..+...+
T Consensus 436 ~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~~~-~~~~~~~p~~~~~~C~~~~~~~ 495 (499)
T 3pxl_A 436 NVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTPD-VKAVNPVPQAWSDLCPTYDALD 495 (499)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE-ESGGG-HHHHSCCCHHHHTHHHHHHTSC
T ss_pred EEEEEEEcCCCceEEEEeCChhHhhCCCcEEEE-EChhH-hccccCCCHHHHHhhhHhhccC
Confidence 999999999999999999999999999999984 45544 3333444555 67897776543
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=9e-93 Score=765.18 Aligned_cols=471 Identities=25% Similarity=0.439 Sum_probs=367.6
Q ss_pred EEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 30 FFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 30 ~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+|+|++++..+++||+.+.+|+|||++ ||+|++++||+|+|+|+|+|+ ++++|||||+++.+++++||++++ |
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999998 999999999999989999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecchHHhhhhh
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSHVELGKQL 182 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (561)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. +.+|+. +++|++|+++||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~Dw~~~~~~~~~~-- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDE-DDENTIITLADWYHIPAPSIQG-- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSTTSEEEEEEECSSCGGGCC---
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCC-CCceEEEEEcccccCChHHhcC--
Confidence 999999999999998788999999999999999999999999987532 234543 2469999999999987665421
Q ss_pred cCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeee
Q 046746 183 DSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY 262 (561)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 262 (561)
.+.++.+||||+.. |.|+. .+..+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|..+
T Consensus 162 -----~~~~d~~liNG~~~---~~~~~-~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 -----AAQPDATLINGKGR---YVGGP-AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp -------CCSEEEETTBCC---BTTCC-CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred -----CCCCCEEEECcccc---cCCCC-CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 14578999999986 55532 2345899999999999999999999999999999999999999999999999
Q ss_pred eeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-------cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccc
Q 046746 263 ESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-------VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSF 335 (561)
Q Consensus 263 ~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 335 (561)
+++.|+|||||||+|++++.+|+|||++....... .....++|+|.+.....+.. +..|... .+..
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~--~l~~---- 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPA--QLNE---- 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCC--BCCG----
T ss_pred CeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccC--CCcc----
Confidence 99999999999999999977899999998652211 12347999998764321100 0001000 0110
Q ss_pred cccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCC
Q 046746 336 RWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPA 415 (561)
Q Consensus 336 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~ 415 (561)
..+.+....+.|.... ....++++.+.... ++. .|+|||++|..+..|+|++.+. +.++.
T Consensus 306 -~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~----g~~~~-------- 365 (503)
T 1hfu_A 306 -ADLHALIDPAAPGIPT---PGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMS----GAQSA-------- 365 (503)
T ss_dssp -GGCBBSSSCSCSSCSS---TTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT----TCCSG--------
T ss_pred -ccccccCccCCCCccc---CCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhc----CCccc--------
Confidence 1122211111111100 01234455443221 222 6999999999888888765432 11110
Q ss_pred cccccccccceEEecCCCcEEEEEEEc-CCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEe-CCCcE
Q 046746 416 DEIENVTLQPNVMDATYKAFMEIVLEN-RQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV-FPNCW 493 (561)
Q Consensus 416 ~~~~~~~~~~~~~~~~~g~~ve~vl~N-~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~v-p~~g~ 493 (561)
.....++.++.++.|++|||+++| .+.+.||||||||+||||+++.+. .+|+.+|.|||||.| ++++|
T Consensus 366 ---~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~ 435 (503)
T 1hfu_A 366 ---NDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDE 435 (503)
T ss_dssp ---GGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCE
T ss_pred ---ccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCce
Confidence 012345778999999999999995 557899999999999999997652 367889999999999 99999
Q ss_pred EEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCC-CccccccCccCC
Q 046746 494 AAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP-DNALLCGIVANM 552 (561)
Q Consensus 494 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~ 552 (561)
++|||++||||.|+|||||++|++.|||+.|.|...+ ..+..++| ++.+.|+.+...
T Consensus 436 v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 436 VTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHHHHHHTC
T ss_pred EEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhccchhhc
Confidence 9999999999999999999999999999999886543 23344556 457899887765
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=4.2e-92 Score=768.01 Aligned_cols=485 Identities=24% Similarity=0.344 Sum_probs=371.1
Q ss_pred cCCCeEEEEEEEEEEE--ecCCCee-eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGT--ISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGV 99 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~--~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv 99 (561)
+.+.+++|+|++++.. +.+||+. +.+|+|||++|||+|++++||+|+|+|+|+| +++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3567899999999999 8999999 9999999999999999999999999999999 6899999999999989999999
Q ss_pred Ccc-CCccCC-CCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCce-EEEecceeecchH
Q 046746 100 LGT-NCPIPP-GKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDF-TLLIGDWYTRSHV 176 (561)
Q Consensus 100 ~~~-q~~i~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~ 176 (561)
+++ ||+|+| |++|+|+|++ .++||||||||.+.|+.+||+|+|||+++.. .+| |.|. +|+|+||+++...
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~----d~d~~~l~l~Dw~~~~~~ 181 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY----DIDLGVFPITDYYYRAAD 181 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC----SEEEEEEEEEEECSSCHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC----cccceEEEEeccccCCHH
Confidence 997 999999 9999999996 6799999999999999999999999998653 234 6776 9999999999876
Q ss_pred HhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc
Q 046746 177 ELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256 (561)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 256 (561)
++..... .+..+.++.++|||+... .|.. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 182 ~~~~~~~-~~~~~~~d~~liNG~~~~---~~~~-~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 256 (559)
T 2q9o_A 182 DLVHFTQ-NNAPPFSDNVLINGTAVN---PNTG-EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVP 256 (559)
T ss_dssp HHHHHHT-TSCCCCBSEEEETTBCBC---TTTC-CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEE
T ss_pred HHhhhhh-cCCCCccceeEECCcccc---CcCC-CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcc
Confidence 6543222 223456789999999862 2211 1235799999999999999999999999999999999999999999
Q ss_pred cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEe--ec---cCCcceeEEEEEecCCCCCCCCCCCCCC--CCccccc
Q 046746 257 VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIAST--RF---TRTVITTTAIVRYSDSKGLASPDLPKAP--VGWDWSL 329 (561)
Q Consensus 257 ~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p--~~~~~~~ 329 (561)
++|..++++.|+|||||||+|++++.+|+|||++.. .. ........++|+|.+.... +|..+ ...+
T Consensus 257 ~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~--- 329 (559)
T 2q9o_A 257 VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG----LPTDEGTPPVD--- 329 (559)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS----CCCCCCCCCCC---
T ss_pred cCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC----CCCCCCCcCCC---
Confidence 999999999999999999999999778999999986 21 1123356899999876421 12111 0000
Q ss_pred cccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccC-CCCchhhhhhcCCCCcccccC
Q 046746 330 NQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVN-SETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 330 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~-~~~P~l~~~~~~~~~~~~~~~ 408 (561)
..+.+. ..+.+..+.+.|...+ ....++++.+.... ..++...|+|||++|.. +..|+|.....+. .
T Consensus 330 ~~~~~~-~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~--~----- 397 (559)
T 2q9o_A 330 HQCLDT-LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN--T----- 397 (559)
T ss_dssp CTTCCC-SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC--C-----
T ss_pred cccccc-cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC--c-----
Confidence 000000 1122211111111111 01123444443321 12345679999999975 4678765433211 0
Q ss_pred CCCCCCCcccccccccceEEecCC-CcEEEEEEEcCC----CCCCceeecCCceEEEeecC---------CCCCcCC-CC
Q 046746 409 VISDKPADEIENVTLQPNVMDATY-KAFMEIVLENRQ----NTMQSWILDGYAFFAVGMEP---------GTWNPDK-RK 473 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~~-g~~ve~vl~N~~----~~~HP~HlHG~~F~Vl~~~~---------g~~~~~~-~~ 473 (561)
....+.+++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++.. ..
T Consensus 398 -----------~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~ 466 (559)
T 2q9o_A 398 -----------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLA 466 (559)
T ss_dssp -----------CCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGG
T ss_pred -----------cCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCcccccc
Confidence 0113456677765 578888899976 78999999999999999987 6666431 24
Q ss_pred CCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCC--CC-ccccccCcc
Q 046746 474 SYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNM--PD-NALLCGIVA 550 (561)
Q Consensus 474 ~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 550 (561)
.+|+.+|.|||||.|++++|++|||+|||||.|||||||++|++.|||++|.|...+ +.+..++ |+ ..+.|+.+.
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD--LRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH--HGGGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch--hhhccccCCchhhhhhccccc
Confidence 588999999999999999999999999999999999999999999999999886433 3334433 54 568998776
Q ss_pred CC
Q 046746 551 NM 552 (561)
Q Consensus 551 ~~ 552 (561)
.-
T Consensus 545 ~~ 546 (559)
T 2q9o_A 545 AY 546 (559)
T ss_dssp HH
T ss_pred cc
Confidence 53
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.3e-86 Score=706.46 Aligned_cols=402 Identities=20% Similarity=0.262 Sum_probs=324.7
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCC
Q 046746 25 GSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNC 104 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~ 104 (561)
.+++++|+|+++++.++++|.++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++ +
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~---~ 87 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF---L 87 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---C
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---c
Confidence 4578999999999999999999999999999999999999999999999999999999999999885 4899987 5
Q ss_pred ccCCCCeEEEEEEec-CceeeeeEecCch----hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhh
Q 046746 105 PIPPGKNYTYYLQVK-DQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
.|+||++|+|+|+++ +++||||||||.+ .|+.+||+|+|||+++.+...... .++|++|+++||+++... +.
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~--~~~e~~l~l~D~~~~~~~-~~ 164 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELR--EAEEHLLVLKDLALQGGR-PA 164 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHH--TSEEEEEEEEEECEETTE-EC
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCC--CCCcEEEEEEeeeeCCCC-cC
Confidence 799999999999985 4799999999974 799999999999998653211111 378999999999997531 10
Q ss_pred hhhcCC-CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc-
Q 046746 180 KQLDSG-KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV- 257 (561)
Q Consensus 180 ~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~- 257 (561)
.....+ .....++.++|||+.. |.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||+++
T Consensus 165 ~~~~~~~~~g~~~~~~~iNG~~~-------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~ 230 (439)
T 2xu9_A 165 PHTPMDWMNGKEGDLVLVNGALR-------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLE 230 (439)
T ss_dssp CCCHHHHHHCCCCSEEEETTEES-------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred CCCccccccCCCCCEEEECCccC-------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCC
Confidence 000000 0113468999999997 99999999 9999999999999999999999999999999997
Q ss_pred ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC------------------CcceeEEEEEecCCCCCCCCCCC
Q 046746 258 VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR------------------TVITTTAIVRYSDSKGLASPDLP 319 (561)
Q Consensus 258 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p 319 (561)
+|..++++.|+|||||||+|++++ +|+|+|++...... ......++++|.+.... .++|
T Consensus 231 ~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p 307 (439)
T 2xu9_A 231 EPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLP 307 (439)
T ss_dssp EEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCC
T ss_pred CceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCc
Confidence 899999999999999999999995 89999999743221 11246788899765421 1222
Q ss_pred CCCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcC
Q 046746 320 KAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYG 399 (561)
Q Consensus 320 ~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~ 399 (561)
. . +.+....+.+ ..++++.|.... .+ ..|+|||++|..+..+
T Consensus 308 ~---~--------------l~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~-------- 349 (439)
T 2xu9_A 308 K---A--------------LSPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD-------- 349 (439)
T ss_dssp S---C--------------CCCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC--------
T ss_pred c---c--------------CCCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc--------
Confidence 1 0 0000000101 123666665432 11 2599999998643211
Q ss_pred CCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCC
Q 046746 400 IPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLID 479 (561)
Q Consensus 400 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~ 479 (561)
+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+ .+
T Consensus 350 ----------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~ 391 (439)
T 2xu9_A 350 ----------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PY 391 (439)
T ss_dssp ----------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SS
T ss_pred ----------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CC
Confidence 3468899999999999999999999999999999975432 36
Q ss_pred CCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 480 AVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 480 P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||||.|++++|++|||++||||.|+|||||++|++.|||..++|+
T Consensus 392 p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 392 RAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp CCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 899999999999999999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.3e-85 Score=696.42 Aligned_cols=403 Identities=17% Similarity=0.179 Sum_probs=321.6
Q ss_pred CeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCc
Q 046746 27 PTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCP 105 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~ 105 (561)
.+++|+|++++..+++ +|.++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.++ +||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 4689999999999998 799999999999999999999999999999999999999999999998764 99999 899
Q ss_pred cCCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCCCCCC--CCCCCCCCceEEEecceeecchHHhh
Q 046746 106 IPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPV--PYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 106 i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~--~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
|+||++|+|+|++.+++||||||||. ..|+.+||+|+|||+++..... |..+ .++|++|+++||+++.+.++.
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y-~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHY-GVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCB-TTTEEEEEEEEEEECTTSCEE
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccC-CCceEEEEEEeeecCCCCcee
Confidence 99999999999986569999999998 5899999999999998754322 2221 478999999999998765543
Q ss_pred hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE-eCcccEEEeecCccc-
Q 046746 180 KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSHV- 257 (561)
Q Consensus 180 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~- 257 (561)
.. ..+.....++.++|||+.. |.++|++| +|||||||+|+.+.+.|+| +||+|+||+.||+++
T Consensus 172 ~~-~~~~~~~~~d~~liNG~~~-------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 172 YN-EPGSGGFVGDTLLVNGVQS-------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp CC-CCSSSCCCCSEEEETTEES-------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred cc-cccCCCCcCCEEEECCccc-------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 21 1222345679999999998 99999999 9999999999999999999 899999999999997
Q ss_pred ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC-----------CcceeEEEEEecCCCCCCCCCCCCCCCCcc
Q 046746 258 VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR-----------TVITTTAIVRYSDSKGLASPDLPKAPVGWD 326 (561)
Q Consensus 258 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~ 326 (561)
+|..++++.|+|||||||+|+++ ++++|+|++...... ......++++|........ .....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~--- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM--- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS---
T ss_pred CceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc---
Confidence 79999999999999999999999 578999997653211 1122357788865432110 0000010
Q ss_pred ccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccc
Q 046746 327 WSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFK 406 (561)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~ 406 (561)
.|.+....+. ....++++.|.. .|+|||++|..+..
T Consensus 312 -----------~L~~~~~~~~--------~~~~~~~~~l~~---------~~~iNg~~f~~~~~---------------- 347 (451)
T 2uxt_A 312 -----------RLLPTEIMAG--------SPIRSRDISLGD---------DPGINGQLWDVNRI---------------- 347 (451)
T ss_dssp -----------CSSSSCCCCC--------CCSEEEEEEECS---------SSSBTTBCCCTTCC----------------
T ss_pred -----------ccCCCCCCCC--------CCcceEEEEEee---------EEEECCEeCCCCCC----------------
Confidence 1111110010 112456666541 48999999864311
Q ss_pred cCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEE
Q 046746 407 YNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTI 486 (561)
Q Consensus 407 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv 486 (561)
.+.++.|++++|+|+|. +.||||||||+||||++++. .+++.+|.|||||
T Consensus 348 --------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDTv 397 (451)
T 2uxt_A 348 --------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDTV 397 (451)
T ss_dssp --------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSEE
T ss_pred --------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccEE
Confidence 13568899999999997 78999999999999999632 1456689999999
Q ss_pred EeCCCcEEEEEEEeCCcce----eeeecccchhhhccceEEEEEecCC
Q 046746 487 QVFPNCWAAILVSMDNAGM----WNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 487 ~vp~~g~~~irf~adnpG~----w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.| +++++|+|++||||. |||||||++|++.|||+.|.|.+.+
T Consensus 398 ~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 398 WV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99 899999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.6e-83 Score=691.19 Aligned_cols=418 Identities=14% Similarity=0.146 Sum_probs=325.1
Q ss_pred CeEEEEEEEEEEE--ecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCC
Q 046746 27 PTFFFTWNVTYGT--ISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNC 104 (561)
Q Consensus 27 ~~~~~~l~~~~~~--~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~ 104 (561)
.+++|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. ++||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CC
Confidence 3578999999755 56789899999999999999999999999999999999999999999998864 699987 89
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCCCCCCCC-CCCceEEEecceeecchHHhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVPVPYNRF-VEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~-~~~e~~l~~~d~~~~~~~~~~ 179 (561)
+|.||++|+|+|++.+++||||||||.+ .|+++||+|+|||+++.+...+++.. .+.|++|+|+||+++.+.++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999766689999999986 57899999999999986554433210 256889999999987665442
Q ss_pred hhhcCC-CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeC-------cccEEEe
Q 046746 180 KQLDSG-KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG-------HTMKLVE 251 (561)
Q Consensus 180 ~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via 251 (561)
.. .+ .....++.++|||+.+ |.++|++ ++|||||||+|+.+.+.|+|++ |+|+||+
T Consensus 191 ~~--~~~~~~~~gd~~lvNG~~~-------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 191 TT--NGELNSFWGDVIHVNGQPW-------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp CC--TTCSSCCCCSEEEETTEES-------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred cc--CCCCccccCceeccCCccC-------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 21 11 1223578999999998 8899998 5999999999999999999987 9999999
Q ss_pred ecCcc-cceeeeeeEEEcccceEEEEEEeCCCCC-ceEEEEEeecc------CCcceeEEEEEecCCCCCCCCCCCCCCC
Q 046746 252 MEGSH-VVQNEYESLDVHVGQCFTVLVTANQDPK-DYYLIASTRFT------RTVITTTAIVRYSDSKGLASPDLPKAPV 323 (561)
Q Consensus 252 ~DG~~-~~p~~~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~p~~p~ 323 (561)
+||++ .+|..+++|.|+|||||||+|++++.+| +|+|++..... .......++++|..............|
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P- 333 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP- 333 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc-
Confidence 99985 5899999999999999999999997677 69999753110 111234578888654321000000001
Q ss_pred CccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCc
Q 046746 324 GWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEE 403 (561)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~ 403 (561)
..+.+. +.|.+. ...++++.|... + ..|+|||++|..+..|++
T Consensus 334 -------------~~L~~~-~~p~~~-------~~~~~~~~~~~~----~--~~w~iNG~~f~~~~~p~l---------- 376 (534)
T 3abg_A 334 -------------ANLRDV-PFPSPT-------TNTPRQFRFGRT----G--PTWTINGVAFADVQNRLL---------- 376 (534)
T ss_dssp -------------CCCCCC-SCCCCC-------CCCCEEEECSCC----C--STTCCCCBTTBCTTSCCC----------
T ss_pred -------------cccccC-CCCCCc-------cccceEEEEecc----C--ceeEECCcccCCCCCcce----------
Confidence 011110 011111 124567766431 1 248999999976544421
Q ss_pred ccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCc
Q 046746 404 VFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVS 482 (561)
Q Consensus 404 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~ 482 (561)
..++.|++++|+|+|.+ .+.||||||||+||||+++.|.+.. ..+++.+ .|
T Consensus 377 ------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~ 428 (534)
T 3abg_A 377 ------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GL 428 (534)
T ss_dssp ------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SC
T ss_pred ------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CC
Confidence 23578999999999987 4699999999999999996553321 1245556 89
Q ss_pred eeEEEeCCCcEEEEEEE-eCCcceeeeecccchhhhccceEEEEEecCC
Q 046746 483 RYTIQVFPNCWAAILVS-MDNAGMWNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 483 rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
||||.|+|+++++|||+ +||||.|||||||++|++.|||+.|.|...+
T Consensus 429 rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 429 KDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp BSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 99999999999999998 8999999999999999999999999998765
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4e-82 Score=672.69 Aligned_cols=407 Identities=22% Similarity=0.255 Sum_probs=315.1
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 24 AGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
+.+++++|+|++++...++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++ ++++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc--
Confidence 5668899999999999996 699999999999999999999999999999999999999999999987 46899998
Q ss_pred CCccCCCCeEEEEEEecCc-eeeeeEecCc----hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH
Q 046746 103 NCPIPPGKNYTYYLQVKDQ-IGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE 177 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (561)
||+|.||++|+|+|+++++ +||||||||. ..|+.+||+|+|||+++......+ +.++ |+++||+++.+++
T Consensus 122 q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~----~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL----KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS----EEEE-EEEEEECCBTTSC
T ss_pred cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC----Ccee-EEEEEEeccCCCc
Confidence 8999999999999998644 8999999997 489999999999999976543333 4454 9999999986654
Q ss_pred hhhh-hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc
Q 046746 178 LGKQ-LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256 (561)
Q Consensus 178 ~~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 256 (561)
+... .........++.++|||+.. |.++|++|+ ||||||+|+.+.+.|+|+||+|+||+.||++
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~-------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK-------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES-------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccCCcCCEEEECCccC-------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 3200 00000123568999999998 999999998 9999999999999999999999999999877
Q ss_pred c-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC-----CcceeEEEEEecCCCCCCCCCCCCCCCCcccccc
Q 046746 257 V-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR-----TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLN 330 (561)
Q Consensus 257 ~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 330 (561)
+ +|..++++.|+|||||||+|+++ +++.|.+.+...... .......++++..... ...+|.
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~---------- 328 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK---------- 328 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS----------
T ss_pred cCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc----------
Confidence 5 79999999999999999999998 578888877432210 0111223333321111 112222
Q ss_pred ccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccC-----Ce--------EEEEEcCeeccCCCCchhhhhh
Q 046746 331 QFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVN-----GK--------VRFAVNGVSYVNSETPLKFAEY 397 (561)
Q Consensus 331 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~-----g~--------~~~~iNg~~f~~~~~P~l~~~~ 397 (561)
.+.+....+. ...+|++.|........ +. ..|+|||+.|... .|
T Consensus 329 -------~l~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~~------ 385 (481)
T 3zx1_A 329 -------NLKIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-RI------ 385 (481)
T ss_dssp -------CSCCCCCCCC---------CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-CC------
T ss_pred -------cccCCCCCCC---------CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC-Cc------
Confidence 0111000111 11456666643211000 01 1389999887522 11
Q ss_pred cCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEee--cCCCCCcCCCCCC
Q 046746 398 YGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGM--EPGTWNPDKRKSY 475 (561)
Q Consensus 398 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~--~~g~~~~~~~~~~ 475 (561)
.+.++.|++|+|+|.|.+.+.|||||||+.|||+++ +....
T Consensus 386 -----------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~-------- 428 (481)
T 3zx1_A 386 -----------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ-------- 428 (481)
T ss_dssp -----------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE--------
T ss_pred -----------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC--------
Confidence 145788999999999999999999999999999998 32211
Q ss_pred CCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 476 NLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 476 n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
...++.|||||.|+|+++++|+|+|||||.|||||||++|+|.|||..|+|.
T Consensus 429 ~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 429 KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1234789999999999999999999999999999999999999999999996
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.8e-81 Score=678.71 Aligned_cols=425 Identities=17% Similarity=0.168 Sum_probs=320.1
Q ss_pred CeEEEEEEEEEEEecC--CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC----------------------Cee
Q 046746 27 PTFFFTWNVTYGTISP--LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE----------------------PFL 82 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~--dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~----------------------~~~ 82 (561)
+..+|+|++++....+ ++..+.+|+|||++|||+|++++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 4566999999988764 4578999999999999999999999999999999975 899
Q ss_pred eeeCCccCCCCCCCCCCCc--c-CCccCCCCeE---EEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCC
Q 046746 83 LTWPGIQHKKNSWQDGVLG--T-NCPIPPGKNY---TYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVP 152 (561)
Q Consensus 83 iH~HG~~~~~~~~~DGv~~--~-q~~i~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 152 (561)
|||||+++. +++||+|+ + ||+|+||++| +|+|++.+++||||||||.+ .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999885 57999986 2 8999999555 99999766799999999986 48999999999999976544
Q ss_pred CCCCCCCCCceEEEecceeecchHHhhhhhc-----------CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEc
Q 046746 153 VPYNRFVEDDFTLLIGDWYTRSHVELGKQLD-----------SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKA 221 (561)
Q Consensus 153 ~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~ 221 (561)
.+++. .++|++|+|+||+++.+.++..... .......++++||||+.+ |.+++++
T Consensus 182 ~~lp~-~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPS-DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW-------------PYLEVEP 247 (513)
T ss_dssp GCCCC-GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES-------------CEEECCS
T ss_pred ccCCC-CCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc-------------ceEEecC
Confidence 33333 4789999999999987654422110 001224679999999998 8999998
Q ss_pred CCEEEEEEEEcCCCceEEEEEeCc-ccEEEeecCccc-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc-C--
Q 046746 222 GKVYKYRICNVGVKTSLNFRIQGH-TMKLVEMEGSHV-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT-R-- 296 (561)
Q Consensus 222 G~~~rlRliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-~-- 296 (561)
++|||||||+|+.+.+.|+|+|| +|+||++||+++ +|..++++.|+|||||||+|++++.+|++......... .
T Consensus 248 -~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~ 326 (513)
T 2wsd_A 248 -RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDV 326 (513)
T ss_dssp -SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSC
T ss_pred -CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccC
Confidence 58999999999999999999999 999999999998 79999999999999999999999767874332221111 0
Q ss_pred CcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeE
Q 046746 297 TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKV 376 (561)
Q Consensus 297 ~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 376 (561)
......++++|..............|.. +......+ . .....++++.|..... ..+..
T Consensus 327 ~~~~~~~il~~~~~~~~~~~~~~~~p~~--------------l~~~~~~~--~-----~~~~~~~~~~l~~~~~-~~g~~ 384 (513)
T 2wsd_A 327 NPETDANIMQFRVTKPLAQKDESRKPKY--------------LASYPSVQ--H-----ERIQNIRTLKLAGTQD-EYGRP 384 (513)
T ss_dssp CTTTTTEEEEEECCSCCSSCCCCCCCSB--------------CSCCGGGC--C-----CCEEEEEEEEEEEEEC-TTSCE
T ss_pred CCCCCcceEEEEeccCcccCccCCCCcc--------------ccCCCCcc--c-----CCCcceEEEEEEeecC-CCCCc
Confidence 1123357888865431110000001110 00000000 0 0112456666654321 23456
Q ss_pred EEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCc
Q 046746 377 RFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYA 456 (561)
Q Consensus 377 ~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~ 456 (561)
.|+|||++|..+. .+.++.|++++|+|+|.+.+.||||||||+
T Consensus 385 ~~~iNg~~~~~~~-------------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~ 427 (513)
T 2wsd_A 385 VLLLNNKRWHDPV-------------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVS 427 (513)
T ss_dssp EEEETTBCTTSCC-------------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCC
T ss_pred eEeECCccCCCcc-------------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCce
Confidence 7899999885330 023577999999999999999999999999
Q ss_pred eEEEeecCC---CCCcCCCCCCCC---------CCCCceeEEEeCCCcEEEEEEEe-CCcceeeeecccchhhhccceEE
Q 046746 457 FFAVGMEPG---TWNPDKRKSYNL---------IDAVSRYTIQVFPNCWAAILVSM-DNAGMWNLRSNIWERNYLGQQLY 523 (561)
Q Consensus 457 F~Vl~~~~g---~~~~~~~~~~n~---------~~P~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~ 523 (561)
||||+++.+ .|++.. .+++ .++.|||||.|+|+++++|+|++ ||||.|||||||++|++.|||..
T Consensus 428 F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~ 505 (513)
T 2wsd_A 428 FRVLDRRPFDIARYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRP 505 (513)
T ss_dssp EEEEEEEEBCHHHHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEE
T ss_pred EEEEEecCcccccccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCcee
Confidence 999999752 121110 1222 23569999999999999999998 89999999999999999999999
Q ss_pred EEEecC
Q 046746 524 LSVRLH 529 (561)
Q Consensus 524 ~~V~~~ 529 (561)
|+|.++
T Consensus 506 ~~V~~~ 511 (513)
T 2wsd_A 506 MDITDP 511 (513)
T ss_dssp EEEBCC
T ss_pred EEEeCC
Confidence 999754
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2e-81 Score=666.30 Aligned_cols=390 Identities=17% Similarity=0.228 Sum_probs=305.6
Q ss_pred eEEEEEEEEEEEecCCCeeeeEEEECCc-CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCcc
Q 046746 28 TFFFTWNVTYGTISPLGIPQQGILINGQ-FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPI 106 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~dG~~~~~~~~Ng~-~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i 106 (561)
.++|+|++ |+|||+ +|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i 81 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAI 81 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCB
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccC
Confidence 55677776 999999 999999999999999999999999999999999885 57999996 999
Q ss_pred CCCCeEEEEEEecCceeeeeEecC----chhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhh
Q 046746 107 PPGKNYTYYLQVKDQIGSYIYHPS----TGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQL 182 (561)
Q Consensus 107 ~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (561)
.||++|+|+|++++++|||||||| ...|+.+||+|+|||+++... .++++ +.+|++|+++||+++. .++....
T Consensus 82 ~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~-d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 82 TPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKY-GVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp CTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCB-TTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCC-CCceEEEEEEeeccCC-Ccccccc
Confidence 999999999998668999999999 669999999999999997654 22222 2389999999999987 5432210
Q ss_pred --cCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE--eC---cccEEEeecCc
Q 046746 183 --DSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI--QG---HTMKLVEMEGS 255 (561)
Q Consensus 183 --~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~ 255 (561)
........++.++|||+.. |.++|++| +|||||||+|+.+.+.|+| +| |+|+||+.||+
T Consensus 159 ~~~~~~~~~~~~~~liNG~~~-------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~ 224 (448)
T 3aw5_A 159 TPMEMIAGFLGNAVLVNGVKD-------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQG 224 (448)
T ss_dssp CHHHHHHCCCCSEEEETTEET-------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTE
T ss_pred cccccccCccccEEEECCccc-------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCC
Confidence 0011124678999999998 99999999 9999999999999999999 99 99999999999
Q ss_pred ccc-eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc--------------CCcceeEEEEEecCCCCCCCCCCCC
Q 046746 256 HVV-QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT--------------RTVITTTAIVRYSDSKGLASPDLPK 320 (561)
Q Consensus 256 ~~~-p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~ 320 (561)
+++ |..++++.|+|||||||+|+++ .+.|||++..... .......++++|.+...... |
T Consensus 225 ~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p- 298 (448)
T 3aw5_A 225 FLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---V- 298 (448)
T ss_dssp EEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---C-
T ss_pred ccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---c-
Confidence 998 9999999999999999999997 3789999875421 01124567778865432110 1
Q ss_pred CCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCC
Q 046746 321 APVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI 400 (561)
Q Consensus 321 ~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~ 400 (561)
..+ . .+. .+ +. ....++++.+... ...|+|||++|... .|+
T Consensus 299 --~~L----~-------~lp----~~-~~------~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~-------- 339 (448)
T 3aw5_A 299 --EAL----S-------DPP----PE-PP------KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL-------- 339 (448)
T ss_dssp --CCC----S-------CCC----CC-CC------CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT--------
T ss_pred --ccc----C-------CCC----CC-CC------CCCceEEEEEeCC------CceeeECCCcCCCC-CCc--------
Confidence 110 0 000 00 00 1124567776532 12599999998642 221
Q ss_pred CCcccccCCCCCCCCcccccccccceEEe-cCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCc-CCCCCC--
Q 046746 401 PEEVFKYNVISDKPADEIENVTLQPNVMD-ATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNP-DKRKSY-- 475 (561)
Q Consensus 401 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~-~~~~~~-- 475 (561)
+. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .....+
T Consensus 340 ---------------------------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~ 391 (448)
T 3aw5_A 340 ---------------------------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNR 391 (448)
T ss_dssp ---------------------------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTT
T ss_pred ---------------------------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCccccccccccc
Confidence 12 467999999999998 8999999999999999995 44421 111122
Q ss_pred --CCCCCCceeEEEeCCCcEEEEE--EE---eCCcceeeeecccchhhhccceEEEEEe
Q 046746 476 --NLIDAVSRYTIQVFPNCWAAIL--VS---MDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 476 --n~~~P~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+..+|.|||||.|+|+++++|+ |+ +||| |||||||++|++.|||..|.|.
T Consensus 392 ~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 392 GRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp CCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 2345579999999999999665 99 9999 9999999999999999999883
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=7.2e-80 Score=684.54 Aligned_cols=443 Identities=13% Similarity=0.079 Sum_probs=309.0
Q ss_pred CCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCC----------------------
Q 046746 25 GSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEP---------------------- 80 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~---------------------- 80 (561)
...++.|+|++++...+ +++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 34567899999888765 456778999999999999999999999999999999654
Q ss_pred -------------------eeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCc----hhhhcc
Q 046746 81 -------------------FLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAA 137 (561)
Q Consensus 81 -------------------~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~ 137 (561)
++|||||+++. +++||++ ||+|.||++|+|+|++.+++||||||||. ..|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 67899999874 6799988 99999999999999986678999999997 479999
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh--h-------cC-----C---CCCCCCCeEEEcCcc
Q 046746 138 GGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ--L-------DS-----G---KLLGKPDGVLINGKS 200 (561)
Q Consensus 138 Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~--~-------~~-----~---~~~~~~~~~liNG~~ 200 (561)
||+|+|||+++.+...+.+. +++|++|+|+||+++.+...... + .. + .....++.++|||+.
T Consensus 185 Gl~G~liI~d~~~~~~~~p~-~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~ 263 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPS-GDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCC-GGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred cceeEEEEcCccccccCCCC-CCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc
Confidence 99999999987655444444 68999999999998765432210 0 00 0 112346899999999
Q ss_pred CCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcc-------cEEEeecCcccc-eeee------eeEE
Q 046746 201 GRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT-------MKLVEMEGSHVV-QNEY------ESLD 266 (561)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~-------~~via~DG~~~~-p~~~------~~v~ 266 (561)
+ |.+.++. ++|||||||+|+.+.+.|+|++|. |+|||+||++++ |+.+ ++|.
T Consensus 264 ~-------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~ 329 (612)
T 3gyr_A 264 W-------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp S-------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEE
T ss_pred c-------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEE
Confidence 8 8999986 589999999999999999999984 999999999984 5544 5899
Q ss_pred EcccceEEEEEEeCCCCCceEEEEEeeccC--------CcceeEEEEEecCCCC--CCCCCCCCCCCCcccccccccccc
Q 046746 267 VHVGQCFTVLVTANQDPKDYYLIASTRFTR--------TVITTTAIVRYSDSKG--LASPDLPKAPVGWDWSLNQFRSFR 336 (561)
Q Consensus 267 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~--------~~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~~~~~~~~~~ 336 (561)
|+|||||||+|++++.+|.++......... ......++++|..... .....+|.......... .....
T Consensus 330 i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~ 407 (612)
T 3gyr_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRM--SHDIP 407 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCC--CTTSC
T ss_pred eccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccccc--ccccc
Confidence 999999999999997777665544322111 0122345555543221 11111221100000000 00000
Q ss_pred c--cccccCCCCCCCCCCCcCCcCcceEEEEcccee----------------ccCCeEEEEEcCeeccCCCCchhhhhhc
Q 046746 337 W--NLTASAARPNPQGSFHYGGIPINRTIRLANTAH----------------LVNGKVRFAVNGVSYVNSETPLKFAEYY 398 (561)
Q Consensus 337 ~--~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~g~~~~~iNg~~f~~~~~P~l~~~~~ 398 (561)
. ...... .+.... .......+.+..... .......|.+|+..
T Consensus 408 ~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-------------- 467 (612)
T 3gyr_A 408 HGHRLIVLT-PPGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTART-------------- 467 (612)
T ss_dssp CEEEEEEEE-CTTCTT-----TTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECS--------------
T ss_pred ccccccccc-cccccc-----ccccccccccccccccccccccccceeeeccCCCccccccccCcc--------------
Confidence 0 000000 000000 000000000000000 00001112222222
Q ss_pred CCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCC-------
Q 046746 399 GIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDK------- 471 (561)
Q Consensus 399 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~------- 471 (561)
+.....+.++.|++|+|+|+|.+.+.||||||||+||||+++.+......
T Consensus 468 -----------------------~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~ 524 (612)
T 3gyr_A 468 -----------------------FNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTR 524 (612)
T ss_dssp -----------------------TTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEES
T ss_pred -----------------------CCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccc
Confidence 22233466889999999999999999999999999999998653322110
Q ss_pred ---------CCCCCCCCCCceeEEEeCCCcEEEEEEE-eCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 472 ---------RKSYNLIDAVSRYTIQVFPNCWAAILVS-MDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 472 ---------~~~~n~~~P~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
....+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|.+++.
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 525 TPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp SCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 1234567789999999999999999998 79999999999999999999999999998764
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.3e-79 Score=651.09 Aligned_cols=414 Identities=20% Similarity=0.257 Sum_probs=310.0
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCC
Q 046746 25 GSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNC 104 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~ 104 (561)
....++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+| ||
T Consensus 14 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~ 89 (488)
T 3od3_A 14 TDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QG 89 (488)
T ss_dssp CCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TC
T ss_pred CCCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cC
Confidence 3456889999999999999999999999999999999999999999999999999999999999886 4699998 89
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCCCCCCCCCC-CCCCceEEEecceeecchHHhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPVPYNR-FVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~-~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
+|.||++|+|+|++.+++||||||||. ..|+++||+|+|||+++.....+++. ++.+|++|+|+||+++.+.++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 999999999999986668999999997 47999999999999987543322221 1356999999999997665432
Q ss_pred hhhc--CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE-eCcccEEEeecCcc
Q 046746 180 KQLD--SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSH 256 (561)
Q Consensus 180 ~~~~--~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~ 256 (561)
...+ .......++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||++
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~-------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY-------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS-------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred ccccccccccCCCCCEEEEcCCcC-------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 2111 001123568999999998 88877 4689999999999999999999 69999999999998
Q ss_pred c-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-----cceeEEEEEecCCCCCCCCCCCCCCCCcccccc
Q 046746 257 V-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-----VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLN 330 (561)
Q Consensus 257 ~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 330 (561)
+ +|..+++|.|+|||||||+|+++ +.+.|++++....... ......+++...........+|.
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~---------- 304 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD---------- 304 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS----------
T ss_pred ccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc----------
Confidence 6 79999999999999999999998 5788998875432110 00111222222110000111121
Q ss_pred ccccccccccccCCCCCCCCCCCcCCcCcceEEEEccce-------------------e----------ccCCe------
Q 046746 331 QFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTA-------------------H----------LVNGK------ 375 (561)
Q Consensus 331 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~-------------------~----------~~~g~------ 375 (561)
.|.+....+.. ....+|++.|.... . ...|.
T Consensus 305 -------~L~~~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 370 (488)
T 3od3_A 305 -------TLSSLPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNH 370 (488)
T ss_dssp -------CCCCCCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCC
T ss_pred -------ccccCCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccc
Confidence 01000000000 01134555442100 0 00110
Q ss_pred -------EEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC-CCC
Q 046746 376 -------VRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ-NTM 447 (561)
Q Consensus 376 -------~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~-~~~ 447 (561)
..|+|||++|... .| .+.++.|++++|.|.|.+ .+.
T Consensus 371 g~~~~~~~~~~ING~~~~~~-~~-----------------------------------~~~~~~G~~e~w~l~N~~~~~~ 414 (488)
T 3od3_A 371 GGKFDFHHANKINGQAFDMN-KP-----------------------------------MFAAAKGQYERWVISGVGDMML 414 (488)
T ss_dssp CGGGCGGGCEEETTBCCCTT-CC-----------------------------------SEECCBSSCEEEEEECTTCCCC
T ss_pred cccccccceeeECCeeCCCC-CC-----------------------------------ceEcCCCCEEEEEEEeCCCCCC
Confidence 1379999988532 12 145788999999999988 679
Q ss_pred CceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeC----CcceeeeecccchhhhccceEE
Q 046746 448 QSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMD----NAGMWNLRSNIWERNYLGQQLY 523 (561)
Q Consensus 448 HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil~H~d~GMm~~ 523 (561)
|||||||++|+|++++..... ..++.|||||.|+ |+++.|+|++| |||.||||||+++|||.|||..
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~ 485 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLG 485 (488)
T ss_dssp EEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEE
T ss_pred ccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEE
Confidence 999999999999999643222 1245799999999 99999999974 5789999999999999999999
Q ss_pred EEE
Q 046746 524 LSV 526 (561)
Q Consensus 524 ~~V 526 (561)
|+|
T Consensus 486 f~V 488 (488)
T 3od3_A 486 FTV 488 (488)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.2e-77 Score=653.47 Aligned_cols=439 Identities=14% Similarity=0.126 Sum_probs=316.0
Q ss_pred CCeEEEEEEEEEEEecC--CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCC-----------------------
Q 046746 26 SPTFFFTWNVTYGTISP--LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEP----------------------- 80 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~--dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~----------------------- 80 (561)
...++|+|++++....+ ++..+++|+|||++|||+|++++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 45789999999998764 45689999999999999999999999999999999753
Q ss_pred ------------------eeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch----hhhccC
Q 046746 81 ------------------FLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAG 138 (561)
Q Consensus 81 ------------------~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~G 138 (561)
+++||||+++.+ .+||++ ||+|.||++|+|+|++.+++||||||||.+ .|+++|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 899999998864 599998 899999999999999766799999999997 499999
Q ss_pred ceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH--hhhh-------hcC---C-C----CCCCCCeEEEcCccC
Q 046746 139 GFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE--LGKQ-------LDS---G-K----LLGKPDGVLINGKSG 201 (561)
Q Consensus 139 l~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~--~~~~-------~~~---~-~----~~~~~~~~liNG~~~ 201 (561)
|+|+|||+++.+.+.+++. +++|++|+|+||+++.+.. +... ++. + + ....++.+||||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~-~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPS-GDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCC-GGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred ceeEEEEcCcccccccCCC-CcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 9999999997654443333 5899999999999975432 1100 010 1 1 113579999999998
Q ss_pred CCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCc-------ccEEEeecCccc-ceeeee------eEEE
Q 046746 202 RLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGH-------TMKLVEMEGSHV-VQNEYE------SLDV 267 (561)
Q Consensus 202 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~~------~v~l 267 (561)
|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|..++ +|.|
T Consensus 265 -------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 265 -------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEE
Confidence 99999999 9999999999999999999999 899999999999 589999 9999
Q ss_pred cccceEEEEEEeCCCCC-ceEEEEEeeccCC-------cceeEEEEEec--CCCCCCCCCCCCCCCC-ccccccc--ccc
Q 046746 268 HVGQCFTVLVTANQDPK-DYYLIASTRFTRT-------VITTTAIVRYS--DSKGLASPDLPKAPVG-WDWSLNQ--FRS 334 (561)
Q Consensus 268 ~pgeR~dv~v~~~~~~g-~y~i~~~~~~~~~-------~~~~~ail~y~--~~~~~~~~~~p~~p~~-~~~~~~~--~~~ 334 (561)
+|||||||+|++++.+| +|+|+........ ......++++. .........+|..-.. .. .+.. ...
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~-~l~~~~~~~ 409 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFR-RMSHDIPHG 409 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCC-CCCTTSCCE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccc-cCCcccccc
Confidence 99999999999998666 6888765321100 01111344443 2221111122321000 00 0000 000
Q ss_pred ccc-cccccCCCCCCCCCCCcCCcCcceEEEEccc---------------eeccCC-eEEEEEcCeeccCCCCchhhhhh
Q 046746 335 FRW-NLTASAARPNPQGSFHYGGIPINRTIRLANT---------------AHLVNG-KVRFAVNGVSYVNSETPLKFAEY 397 (561)
Q Consensus 335 ~~~-~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~---------------~~~~~g-~~~~~iNg~~f~~~~~P~l~~~~ 397 (561)
.+. .+.+ |...+ .....+.+.+... ....+| ...|+|||+.|.+.
T Consensus 410 ~r~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~--------- 471 (612)
T 2g23_A 410 HRLIVLTP----PGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG--------- 471 (612)
T ss_dssp EEEEEECC----TTCTT-----STTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC---------
T ss_pred eeEEeecc----ccccc-----cccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC---------
Confidence 000 0000 00000 0000011111100 000122 24577888776421
Q ss_pred cCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCC------
Q 046746 398 YGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDK------ 471 (561)
Q Consensus 398 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~------ 471 (561)
..+.++.|++|+|+|+|.+.+.|||||||+.|+|++++.+.++..+
T Consensus 472 ----------------------------~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~ 523 (612)
T 2g23_A 472 ----------------------------LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGT 523 (612)
T ss_dssp ----------------------------CCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEE
T ss_pred ----------------------------CceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCc
Confidence 1245788999999999999999999999999999998643211100
Q ss_pred ----------CCCCCCCCCCceeEEEeCCCcEEEEEEEeC-CcceeeeecccchhhhccceEEEEEecCC
Q 046746 472 ----------RKSYNLIDAVSRYTIQVFPNCWAAILVSMD-NAGMWNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 472 ----------~~~~n~~~P~~rDTv~vp~~g~~~irf~ad-npG~w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
....+..++.|||||.|+|+++++|+|+|| |||.|||||||++|+|.|||..|.|.+.+
T Consensus 524 ~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 524 RTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp SSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 012445567799999999999999999999 99999999999999999999999997643
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=7.6e-54 Score=497.00 Aligned_cols=392 Identities=16% Similarity=0.221 Sum_probs=268.9
Q ss_pred cccCCCeEEEEEEEEEEEec--CCCe--------------------------eeeEE-------EECCc--------CCC
Q 046746 22 VEAGSPTFFFTWNVTYGTIS--PLGI--------------------------PQQGI-------LINGQ--------FPG 58 (561)
Q Consensus 22 ~~a~~~~~~~~l~~~~~~~~--~dG~--------------------------~~~~~-------~~Ng~--------~pg 58 (561)
..+.+.+|+|.+.|.+..+. +.|. .+.++ .||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 34557899999999998754 3332 22233 47777 999
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCC----CCCCCCCCCc--c-CCccCCCCeEEEEEEecCc---------e
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHK----KNSWQDGVLG--T-NCPIPPGKNYTYYLQVKDQ---------I 122 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~-q~~i~PG~~~~Y~f~~~~~---------~ 122 (561)
|+||+++||+|+|+|+|+|+++++|||||+++. +.+|+||+++ + ||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999986 4577888887 3 9999999999999998654 5
Q ss_pred eeeeEecCchh--hhccCceeEEEEecCCCCCCCCCCCCCCceEEEec------ceeecchHHhhhhh-cCCCC----C-
Q 046746 123 GSYIYHPSTGF--HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIG------DWYTRSHVELGKQL-DSGKL----L- 188 (561)
Q Consensus 123 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~------d~~~~~~~~~~~~~-~~~~~----~- 188 (561)
||||||||.+. |+.+||+|+|||+++.....+.+...|+|++|+++ ||++... +...+ +.+.. .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999984 56899999999999865433322213789999999 5554321 11111 11100 0
Q ss_pred --CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeE
Q 046746 189 --GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESL 265 (561)
Q Consensus 189 --~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v 265 (561)
..++.++|||+.+ +..+.+++++|++|||||+|+|.. ..+.|+|+||+|++ +|..+|++
T Consensus 253 ~~~~~~~~~iNG~~~----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv 314 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTF----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTI 314 (1065)
T ss_dssp HHHHTEEEEETTEET----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEE
T ss_pred ccccCcEEEECCccC----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEE
Confidence 0235799999985 234789999999999999999986 68899999999993 57799999
Q ss_pred EEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCC-
Q 046746 266 DVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAA- 344 (561)
Q Consensus 266 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~- 344 (561)
.|.|||||||+|+++ .+|.|+|++...... .....+.++|.+...+.+.+.|..+....+ +..++.+.|++.+...
T Consensus 315 ~I~pGer~dVlv~~~-~pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~~~~~~-~i~A~e~~wdy~~~~~~ 391 (1065)
T 2j5w_A 315 NLFPATLFDAYMVAQ-NPGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGKHVRHY-YIAAEEIIWNYAPSGID 391 (1065)
T ss_dssp EECBTCEEEEEEECC-SCEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTSEEEEE-EEEEEEEEEESCTTSBC
T ss_pred EECCCcEEEEEEEeC-CCeeEEEEecCcchh-hCCCEEEEEEecCCCccccccccccceeEE-EEeceecccccCCCCcc
Confidence 999999999999999 489999999865321 124577888876554333333332111112 3456667777765532
Q ss_pred -----CCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccc
Q 046746 345 -----RPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIE 419 (561)
Q Consensus 345 -----~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 419 (561)
.+++++++ ...+ |.......++..+..++ ++|.+. +|+.+ ....|.. .
T Consensus 392 ~~~~~~~~~~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d~---------------~f~~~-~~~~~~~--~ 444 (1065)
T 2j5w_A 392 IFTKENLTAPGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTDA---------------SFTNR-KERGPEE--E 444 (1065)
T ss_dssp TTTCCBTTCTTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESST---------------TCCSB-CCCCGGG--G
T ss_pred cccccccCCCccc-------chhh-hccCCcccCceEeeeee-ecccCC---------------ceEEc-CcCCccc--c
Confidence 12222211 1111 22222233555555555 555421 12111 0111110 0
Q ss_pred cccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeec
Q 046746 420 NVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGME 463 (561)
Q Consensus 420 ~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~ 463 (561)
..-.-..++.++.|++++|+|.|.....|+||+||+.|++++.|
T Consensus 445 ~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 445 HLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp GGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred cccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 01122567899999999999999999999999999999987653
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=4.3e-53 Score=429.16 Aligned_cols=267 Identities=20% Similarity=0.324 Sum_probs=225.1
Q ss_pred CeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CC
Q 046746 27 PTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NC 104 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (561)
.||+|+|++++...++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+++++||+|++ ||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 488899999999999999999999999999999999999999999999888899999987 99
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchhhh---ccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR---AAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
+|.||++++|+|++ +++||||||||.+.+. .+||+|+|||+++...+.+.+ .++|++|+++||+++.....
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~--~d~e~~l~l~dw~~~~~~~~--- 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKT--VTKDYILMLSDWVSSWANKP--- 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHT--CCEEEEEEEEEECGGGTTCT---
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccccccc--ccceeEEEEEeecccccccc---
Confidence 99999999999996 6899999999998543 589999999998654322222 38899999999987543211
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc-cee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV-VQN 260 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~ 260 (561)
...+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|.
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~----------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP----------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT----------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred ccCCCCCCcCcEEEEcCcCCC----------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 111222235789999999872 12459999999999999999975 679999999999999999998 688
Q ss_pred eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-----cceeEEEEEecCCC
Q 046746 261 EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-----VITTTAIVRYSDSK 311 (561)
Q Consensus 261 ~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~ 311 (561)
.+|++.|.||||+||+++++ .||.|.++++...-.. .....++|+|.+..
T Consensus 224 ~~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESEEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cccEEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999999998 7999999998653322 13457899998754
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.7e-56 Score=495.94 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=183.2
Q ss_pred CeEEEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCC----CCCCCCCCCc
Q 046746 27 PTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHK----KNSWQDGVLG 101 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~ 101 (561)
.+....+.++....... |+.+..|+ ++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+++||+++
T Consensus 45 ~~y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~ 121 (742)
T 2r7e_A 45 VVYKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQ 121 (742)
T ss_dssp CCEECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCS
T ss_pred CEEEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcc
Confidence 34455666666666654 66666664 8999999999999999999999999999999999874 3334444432
Q ss_pred --c-CCccCCCCeEEEEEEecC---------ceeeeeEecCchh--hhccCceeEEEEecCCCCCCCCCCCCCCceEEEe
Q 046746 102 --T-NCPIPPGKNYTYYLQVKD---------QIGSYIYHPSTGF--HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLI 167 (561)
Q Consensus 102 --~-q~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~ 167 (561)
+ ||+|+||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++......... ..+|+++++
T Consensus 122 ~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~-~~~e~~l~~ 200 (742)
T 2r7e_A 122 REKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ-TLHKFILLF 200 (742)
T ss_dssp SSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTT-CCCEECCCE
T ss_pred cccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCc-eeeEEEEEe
Confidence 3 999999999999999854 4699999999985 899999999999997543211111 237888777
Q ss_pred cc------eeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEE
Q 046746 168 GD------WYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNF 240 (561)
Q Consensus 168 ~d------~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~ 240 (561)
++ |+++........++........+.++|||+.+ ++.+.+++++|++|||||+|++... .+.|
T Consensus 201 ~~~de~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~ 270 (742)
T 2r7e_A 201 AVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSI 270 (742)
T ss_dssp ECCCCSSSSCCCCCC-------CCSCCCCCCCCEETTBCT----------BCCCCCEECSSSCEEEECCCCCSSSCCCCC
T ss_pred ecccCCccccccccccccccCCCccccccCceEEECCccC----------CCCcceEEcCCCEEEEEEEeCCCCCcceEE
Confidence 54 44432211000011111112356789999985 2347899999999999999999875 7899
Q ss_pred EEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 241 RIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 241 ~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
||+||.|+|++ ..+|++.|.|||+++|+++++ .+|.|.++++..
T Consensus 271 hlhGh~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 271 FLEGHTFLVRN--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp CCTTCCCEETT--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred EECCCEEEEEe--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 99999999984 247889999999999999998 799999888743
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=9.9e-52 Score=423.72 Aligned_cols=267 Identities=24% Similarity=0.405 Sum_probs=224.6
Q ss_pred CeEEEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CC
Q 046746 27 PTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NC 104 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (561)
.+++|+|++++...+++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++.+++++||+|++ ||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999875 99999999999999999999999999999999999999999999999988899999987 99
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchh--hhc-cCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGF--HRA-AGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
+|.||++|+|+|++ +++||||||||... |+. +||+|++||+++.....+.. .++|++++++||++......
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~--- 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKR--VTKDVIMMMSTWESAVADKY--- 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGG--CSEEEEEEEEEECGGGTTCT---
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccccc--CCceEEEEeeheeccccccc---
Confidence 99999999999996 58999999999874 777 99999999998654332222 37899999999986321110
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc-ee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV-QN 260 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~-p~ 260 (561)
...+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.+++ |.
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~----------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP----------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT----------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCCccccceEEEccccCC----------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 011112225789999999862 12459999999999999999964 8899999999999999999986 78
Q ss_pred eeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc-----CCcceeEEEEEecCCC
Q 046746 261 EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT-----RTVITTTAIVRYSDSK 311 (561)
Q Consensus 261 ~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~ 311 (561)
.+|++.|.||||+||+|+++ .+|.|++++....- .......++++|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 89999999999999999998 68999999975532 1223457899998754
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.5e-50 Score=429.12 Aligned_cols=398 Identities=16% Similarity=0.135 Sum_probs=265.6
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 23 EAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+.+.+++++++++++....+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||.... .
T Consensus 23 ~~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~ 88 (447)
T 2dv6_A 23 AHAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------S 88 (447)
T ss_dssp -CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------C
T ss_pred cCCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------c
Confidence 3455667777777665544433 456899999 9999999999999999999987799999996321 2
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCC----CCCCceEEEecceeecch--H
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNR----FVEDDFTLLIGDWYTRSH--V 176 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~----~~~~e~~l~~~d~~~~~~--~ 176 (561)
+|+|.||++++|.|++ .++||||||||.+.|+.+||.|.|+|+++.......+. ....+++..+ |+..... .
T Consensus 89 ~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 89 AIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred ceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 7999999999999996 46999999999999999999999999986542210000 0011111111 1110000 0
Q ss_pred Hhh-----hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCC-CceEEEEEeCcccEEE
Q 046746 177 ELG-----KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGV-KTSLNFRIQGHTMKLV 250 (561)
Q Consensus 177 ~~~-----~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~vi 250 (561)
.+. ..+..| ...+.++|||+.. .|.+++++|+++||||+|.+. ...+.++++|. +
T Consensus 167 ~l~~~~~~~~~~~g---~~~~~~~~NG~~p------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~ 227 (447)
T 2dv6_A 167 DLETVEVKGQLDDN---TTYTYWTFNGKVP------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----T 227 (447)
T ss_dssp EEEEEEEEEEEETT---EEEEEEEETTBBS------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----C
T ss_pred EEEEEEEEEeccCC---ceeEEEEECCccC------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----c
Confidence 000 000011 1246799999863 289999999999999999986 34567777764 3
Q ss_pred eecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc-CC-cceeEEEEEecCCCCCCCCCCCCCCCCcccc
Q 046746 251 EMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT-RT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWS 328 (561)
Q Consensus 251 a~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 328 (561)
+.||.+ +++.|.||||++++++++ .+|+||+++..... .+ .....+.+.|.+.. .+|. .+....
T Consensus 228 ~~DG~~------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~--~d~~~~ 293 (447)
T 2dv6_A 228 GPGGAA------AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ--VDREFY 293 (447)
T ss_dssp SGGGGG------GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC--CSEEEE
T ss_pred CCCCCC------ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC--CCeeEE
Confidence 679874 234699999999999998 57999999974211 11 12345666665432 1221 110000
Q ss_pred ccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccC
Q 046746 329 LNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 329 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~ 408 (561)
+.. . .+.... ..+. .....+............|.|||+.+...
T Consensus 294 ~~~-~--~~~~~~------~~~~--------~g~~~~~~~~~~~~~~~~~~iNG~~~~~~-------------------- 336 (447)
T 2dv6_A 294 VMQ-G--EIYTVK------SFGT--------SGEQEMDYEKLINEKPEYFLFNGSVGSLT-------------------- 336 (447)
T ss_dssp EEE-E--EECBSS------CTTC--------CEECCBBHHHHHTTCCSEEEETTSTTCCC--------------------
T ss_pred EEe-c--ccccCC------cccc--------cccccCChHHhhccCCCEEEECCcccCCC--------------------
Confidence 000 0 000000 0000 00000000000001123588999875311
Q ss_pred CCCCCCCcccccccccceEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEE
Q 046746 409 VISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTI 486 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv 486 (561)
....+.++.|++++|+|+|.+ ...||||||||+|+||+++.+. +..|. +|||+
T Consensus 337 ---------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~----------~~~p~~~~dtv 391 (447)
T 2dv6_A 337 ---------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV----------VSPPLIGVQTV 391 (447)
T ss_dssp ---------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS----------SSCCEEEESEE
T ss_pred ---------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc----------cCCCcccccEE
Confidence 012466788999999999987 6789999999999999996432 12344 79999
Q ss_pred EeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 487 QVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 487 ~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
.|++|+++.|+|++||||.|+||||+++|++.||++.+.|.....
T Consensus 392 ~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 392 SVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999999999999999999999976654
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.5e-49 Score=395.98 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=107.4
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 23 EAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+...+|+|+|+|++.. .+.....++.|||++|||+||+++||+|+|+|+|+|+++++|||||+++.. ++||++..
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t 77 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMN 77 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTT
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCC
Confidence 35678999999999753 344555678899999999999999999999999999999999999998864 69999955
Q ss_pred CCccCCCCeEEEEEEecC------------ceeeeeEecCch------hhhccCceeEEEEecCC
Q 046746 103 NCPIPPGKNYTYYLQVKD------------QIGSYIYHPSTG------FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~ 149 (561)
||+|.||++|+|+|++.+ ++||||||||.+ .|+.+||+|+|||+++.
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence 999999999999999853 379999999984 68999999999999964
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.8e-49 Score=399.06 Aligned_cols=140 Identities=21% Similarity=0.229 Sum_probs=111.1
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 21 LVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 21 ~~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
...+.+.+|+|+|.+++..... ..+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +++||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 3556788999999998765221 23445666999999999999999999999999999999999999874 6799999
Q ss_pred ccCCccCCCCeEEEEEEec------------CceeeeeEecCch------hhhccCceeEEEEecCCCCCCCCCCCCCCc
Q 046746 101 GTNCPIPPGKNYTYYLQVK------------DQIGSYIYHPSTG------FHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e 162 (561)
..||+|.||++|+|+|+++ .++||||||||.+ .|+.+||+|+|||+++.. .. .|+|
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~~----~d~e 171 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--LL----PKRQ 171 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--CC----CSEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc--cC----cccc
Confidence 7799999999999999974 2589999999974 478899999999998642 11 2666
Q ss_pred eEEEecce
Q 046746 163 FTLLIGDW 170 (561)
Q Consensus 163 ~~l~~~d~ 170 (561)
+++++++|
T Consensus 172 ~~l~~~~~ 179 (299)
T 3t9w_A 172 FTVVFNDM 179 (299)
T ss_dssp EEEEEETT
T ss_pred ceeeeeee
Confidence 66665443
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=5.1e-49 Score=398.91 Aligned_cols=138 Identities=21% Similarity=0.242 Sum_probs=114.8
Q ss_pred cccCCCeEEEEEEEEEEEecCCCee-eeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 22 VEAGSPTFFFTWNVTYGTISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 22 ~~a~~~~~~~~l~~~~~~~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
+.+.+.+|+++|.+++ .++|.. +.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 4556678999998753 356644 556778999999999999999999999999999999999999875 5699999
Q ss_pred ccCCccCCCCeEEEEEEec------------CceeeeeEecCch------hhhccCceeEEEEecCCCCCCCCCCCCCCc
Q 046746 101 GTNCPIPPGKNYTYYLQVK------------DQIGSYIYHPSTG------FHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e 162 (561)
..||+|.||++|+|+|++. .++||||||||.. .|+.+||+|+|||+++.. .. .|+|
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~~----~d~e 155 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--VL----PDRT 155 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--BC----CSEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--cc----cccc
Confidence 8899999999999999853 3579999999975 357899999999999653 12 3778
Q ss_pred eEEEecce
Q 046746 163 FTLLIGDW 170 (561)
Q Consensus 163 ~~l~~~d~ 170 (561)
++|+++||
T Consensus 156 ~~l~~~d~ 163 (313)
T 3tas_A 156 HTIVFNDM 163 (313)
T ss_dssp EEEEEETT
T ss_pred ceeeccch
Confidence 88877665
No 26
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.3e-48 Score=398.53 Aligned_cols=267 Identities=21% Similarity=0.348 Sum_probs=220.6
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
..+++++|+|++++...++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 3558899999999999987 799999999999999999999999999999999996 58999999984 378876
Q ss_pred ccCCccCCCCeEEEEEEecCceeeeeEecCc---hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH
Q 046746 101 GTNCPIPPGKNYTYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE 177 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (561)
.. ..|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++. .+ . .|+|++++++||+++....
T Consensus 109 ~~-~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p--~-~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AA-TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP--K-VDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC--C-CSEEEEEEEEEECBSSCTT
T ss_pred cc-eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC--C-CceEEEEEeeeeeccCccc
Confidence 43 459999999999996 679999999997 4799999999999998642 22 1 3889999999999864211
Q ss_pred hhhh--hc-CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecC
Q 046746 178 LGKQ--LD-SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEG 254 (561)
Q Consensus 178 ~~~~--~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 254 (561)
.... .+ .......++.++|||+.++++ ..+.+++++|++|||||+|+|+...+.|+|+||.|+||+.||
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~--------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG 253 (327)
T 1kbv_A 182 AQGLQPFDMDKAVAEQPEYVVFNGHVGALT--------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEG 253 (327)
T ss_dssp CCEEECBCHHHHHHTCCSEEEETTSTTTTS--------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGG
T ss_pred cccccccChhHhccCCCceEEEcCcccCCC--------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCC
Confidence 0000 00 000012468999999987210 126799999999999999999989999999999999999999
Q ss_pred cccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 255 SHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 255 ~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
.+++|..++++.|+||||+||+|+++ .+|+|+|++............|+++|.+..
T Consensus 254 ~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 254 GKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp SSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999999999999999999 689999999865432233568999998765
No 27
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=6.9e-47 Score=379.02 Aligned_cols=237 Identities=20% Similarity=0.325 Sum_probs=205.1
Q ss_pred CCCeEEEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-
Q 046746 25 GSPTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
...+++|+|++++...++. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++ ..++||+|+.
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCcc
Confidence 3457899999999988764 9999999999999999999999999999999999999999999996 3689999987
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
||+|+||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++...+ + .++|++|+++||+.++
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~-~----~d~e~~l~~~d~~~~~----- 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-P----ADDEMVMVMNGYNTDG----- 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC-C----CSEEEEEEEEEECCSS-----
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC-C----CcceEEEEEeeEecCC-----
Confidence 9999999999999996 7899999999997 68999999999999975432 2 3789999999998651
Q ss_pred hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEEEEeCcccEEEeecCcccc
Q 046746 180 KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVV 258 (561)
Q Consensus 180 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~ 258 (561)
+ ..++.++|||+.+. + ..+.++++.|+++||||+|++... .+.|||+||.|+|++.++....
T Consensus 177 -----g---~~~~~~~iNG~~~~--~-------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~ 239 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFH--F-------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTP 239 (288)
T ss_dssp -----T---TCCSEEEETTSTTH--H-------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSC
T ss_pred -----C---CCcceEEECccccc--c-------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCC
Confidence 1 13578999999861 0 014699999999999999999754 7899999999999984443335
Q ss_pred eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 259 QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 259 p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+...|++.|.||||++|+++++ .||.|.++++..
T Consensus 240 ~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 240 SEYTDTISQVQGQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp SEEESEEEEETTCEEEEEECCC-SCEEEEEECSSH
T ss_pred CceeeEEEeCCCceEEEEEECC-CCEEEEEEecCh
Confidence 6889999999999999999998 899999998743
No 28
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=6e-47 Score=439.30 Aligned_cols=396 Identities=13% Similarity=0.125 Sum_probs=261.7
Q ss_pred eeeeEEEECCcCCC--CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCC-CCCCCCCCccCCccCCCCeEEEEEEecCc
Q 046746 45 IPQQGILINGQFPG--PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKK-NSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121 (561)
Q Consensus 45 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~ 121 (561)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++.+.|+|.||.+++|.|++ ++
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~~ 691 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-DT 691 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-CC
Confidence 56789999999999 889999999999999976 4569999999998 99999998777999999999999995 68
Q ss_pred eeeeeEecCchhhhccCceeEEEEecCCCCCCC-CCCCCCCceEEEe----cceeecchHHhhhhh--cCCCCCCCCCeE
Q 046746 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVP-YNRFVEDDFTLLI----GDWYTRSHVELGKQL--DSGKLLGKPDGV 194 (561)
Q Consensus 122 ~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~-~~~~~~~e~~l~~----~d~~~~~~~~~~~~~--~~~~~~~~~~~~ 194 (561)
+||||||||...|+.+||.|.++|+++.....+ ++. +.|.++.+ .||++.....+...+ ..+.. +...
T Consensus 692 ~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~y--d~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~ 766 (1065)
T 2j5w_A 692 EGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFY--LGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNA 766 (1065)
T ss_dssp CEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCC--SEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCT
T ss_pred CeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCC--CcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccce
Confidence 999999999999999999999999987543333 433 78889999 899997654322111 01110 2223
Q ss_pred EEcCccC------C---C-CCCCCC-------------CCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEe
Q 046746 195 LINGKSG------R---L-DYDSDG-------------KGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVE 251 (561)
Q Consensus 195 liNG~~~------~---~-~~~~~~-------------~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 251 (561)
++|+... + | .|.++. .+.+.|.|++++|+++++|+.|... ..+.++.+| +.+..
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HG--l~~~~ 843 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHG--VQTES 843 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESS--CBCSC
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecc--ccccC
Confidence 3333211 0 0 011110 1234589999999999999999966 455666666 44333
Q ss_pred ecCcccceeeeeeEEEcccceEEEEEEeCCC---------CCceEEEEEeeccCCc-ceeEEEEEecCCCCCCCCCCCCC
Q 046746 252 MEGSHVVQNEYESLDVHVGQCFTVLVTANQD---------PKDYYLIASTRFTRTV-ITTTAIVRYSDSKGLASPDLPKA 321 (561)
Q Consensus 252 ~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~---------~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~ 321 (561)
. | ...+.||+++...+...+. +|.||.+.+.....+. ....+.|.+....... ....
T Consensus 844 ~-~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~---~~~~ 910 (1065)
T 2j5w_A 844 S-T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK---VFNP 910 (1065)
T ss_dssp S-C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC--------CC
T ss_pred C-C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc---ccCC
Confidence 2 2 1256899998888876542 2589988764321111 1223333333221100 0001
Q ss_pred CCCcccccccc-c--ccccccccc--CCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhh
Q 046746 322 PVGWDWSLNQF-R--SFRWNLTAS--AARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAE 396 (561)
Q Consensus 322 p~~~~~~~~~~-~--~~~~~l~~~--~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~ 396 (561)
+.+.+..+... . ...+-+... ...+.|.. + +.... .+. .....|.|||..|..
T Consensus 911 ~~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~-v-----~~~~~-~~~------~~~~~~~iNG~~~~~--------- 968 (1065)
T 2j5w_A 911 RRKLEFALLFLVFDENESWYLDDNIKTYSDHPEK-V-----NKDDE-EFI------ESNKMHAINGRMFGN--------- 968 (1065)
T ss_dssp CCEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGG-C-----CTTCH-HHH------HHTEEEEETTBCTTC---------
T ss_pred CcceEEEEEEEeecCCcceeeccCcccccCCccc-c-----Ccchh-hhh------ccCceEEECCccCCC---------
Confidence 11111110000 0 000000000 00000000 0 00000 000 011247888876531
Q ss_pred hcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCC
Q 046746 397 YYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKS 474 (561)
Q Consensus 397 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~ 474 (561)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++
T Consensus 969 ----------------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------- 1009 (1065)
T 2j5w_A 969 ----------------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------- 1009 (1065)
T ss_dssp ----------------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT-----------
T ss_pred ----------------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC-----------
Confidence 11245788999999999975 5789999999999998763
Q ss_pred CCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 475 YNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 475 ~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
|.+||||.|+|+++++|+|++||||.|+||||+++|++.|||..|.|.+.+.
T Consensus 1010 -----p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 -----VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp -----CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred -----CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 5799999999999999999999999999999999999999999999987643
No 29
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=7e-46 Score=379.83 Aligned_cols=134 Identities=20% Similarity=0.235 Sum_probs=108.2
Q ss_pred CCCeEEEEEEEEEEEecCCCeee-eEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 25 GSPTFFFTWNVTYGTISPLGIPQ-QGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~dG~~~-~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
...+++|+|++++. ++|... .++.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++..|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 44779999999975 244321 12234899999999999999999999999999999999999876 6799999669
Q ss_pred CccCCCCeEEEEEEecC------------ceeeeeEecCc------hhhhccCceeEEEEecCCCCCCCCCCCCCCceEE
Q 046746 104 CPIPPGKNYTYYLQVKD------------QIGSYIYHPST------GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTL 165 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l 165 (561)
|+|.||++++|+|++.+ ++|+||||||. ..|+.+||+|++||+++... . .|+|+++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~----pd~e~~l 193 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L----PDATHTI 193 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C----CSEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C----CCceEEE
Confidence 99999999999999732 35999999996 36899999999999986431 1 2566666
Q ss_pred Eecc
Q 046746 166 LIGD 169 (561)
Q Consensus 166 ~~~d 169 (561)
+++|
T Consensus 194 ~~~d 197 (343)
T 3cg8_A 194 VFND 197 (343)
T ss_dssp EEET
T ss_pred Eccc
Confidence 6554
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=3.5e-45 Score=389.61 Aligned_cols=269 Identities=21% Similarity=0.323 Sum_probs=222.0
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCC
Q 046746 23 EAGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGV 99 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv 99 (561)
.+.+++++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 35678899999999999984 899999999999999999999999999999999995 599999999864 6887
Q ss_pred CccCCccCCCCeEEEEEEecCceeeeeEecCc---hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchH
Q 046746 100 LGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHV 176 (561)
Q Consensus 100 ~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~ 176 (561)
+.+ .+|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ . .|+|++|+++||+++...
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~-~----~d~e~~l~l~d~~~~~~~ 170 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA-P----VDREYYLVQGDFYTKGEF 170 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC-C----CSEEEEEEEEEECBSSCT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCC-C----CCceEEEEeeeeeccCcc
Confidence 753 469999999999996 679999999974 489999999999999864322 2 389999999999987531
Q ss_pred H-hh-hhhc-CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeec
Q 046746 177 E-LG-KQLD-SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEME 253 (561)
Q Consensus 177 ~-~~-~~~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 253 (561)
. .. ...+ .......+++++|||+.+. +. ..+.+++++|++|||||+|+|....+.|+|+||.|+||+.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~liNG~~~~--~~------~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 171 GEAGLQPFDMAKAIDEDADYVVFNGSVGS--TT------DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp TCCEEECBCHHHHHTTCCSEEEETTSTTT--TS------GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cccccccCChhHhccCCCCEEEECCCcCC--CC------CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 1 00 0000 0001246789999999861 10 12689999999999999999998999999999999999999
Q ss_pred CcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCC
Q 046746 254 GSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 254 G~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 312 (561)
|.+++|..++++.|.||||+||+|+++ .+|+|++++............++++|.+...
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 999999999999999999999999999 6899999997553322345689999987653
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.1e-44 Score=371.30 Aligned_cols=270 Identities=18% Similarity=0.204 Sum_probs=209.9
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc
Q 046746 23 EAGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG 101 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 101 (561)
.+.+.+++|+|++++...++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+.
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 44568999999999999887 5999999999999999999999999999999999 5799999999876544555444
Q ss_pred cCCccCCCCeEEEEEEecCceeeeeEecCch-----hhhccCceeEEEEecCCCCC----CCCCCCCCCceEEEecceee
Q 046746 102 TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-----FHRAAGGFGGLCIHSRSVVP----VPYNRFVEDDFTLLIGDWYT 172 (561)
Q Consensus 102 ~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~~e~~l~~~d~~~ 172 (561)
+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++...+ .+++. |+|++|+++||++
T Consensus 104 ~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~--d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 104 L-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRY--DTVYYIGESDHYI 179 (333)
T ss_dssp G-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCC--SEEEEEEEEEECC
T ss_pred e-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCcc--chheeeeeeeecc
Confidence 4 259999999999996 6799999999997 69999999999999764321 23333 8899999999998
Q ss_pred cc--hHHhhhh----------hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEE
Q 046746 173 RS--HVELGKQ----------LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240 (561)
Q Consensus 173 ~~--~~~~~~~----------~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~ 240 (561)
.. +..+..+ ++. .....++.++|||+..++ . ..+.+++++|++||||++|++....+ .
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~--~------~~~~l~v~~Ger~Rl~n~~~~~~~~~-h 249 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGAL--T------GEGALKAKVGDNVLFVHSQPNRDSRP-H 249 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTT--S------GGGCEEEETTCEEEEEEEESSSCBCE-E
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCccccc--C------CCcceEecCCCEEEEEECCCCCcccc-E
Confidence 32 2211100 000 012457899999998521 0 12679999999988877766544333 2
Q ss_pred EEeCcccEEEeecCcccce-e-eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 241 RIQGHTMKLVEMEGSHVVQ-N-EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 241 ~i~gh~~~via~DG~~~~p-~-~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
.+++|.|+|++ ||.++++ . .++++.|.||||+||+|+++ .+|+|+++++...........++++|.+..
T Consensus 250 ~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 250 LIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 37899999999 9999874 3 58999999999999999999 589999999865322124567899998754
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=6.3e-44 Score=366.26 Aligned_cols=269 Identities=18% Similarity=0.245 Sum_probs=206.5
Q ss_pred CCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 25 GSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+++++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 55789999999999875 5699999999999999999999999999999999973 456777666655566666544
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCC----CCCCCCCCCceEEEecceeecc
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVP----VPYNRFVEDDFTLLIGDWYTRS 174 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~~e~~l~~~d~~~~~ 174 (561)
..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++...+ .+.. .|+|++|+++||++..
T Consensus 106 -~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~--~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 106 -TNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLH--YDRAYTIGEFDLYIPK 181 (336)
T ss_dssp -CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCC--CSEEEEEEEEEECCCB
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCccc--CCceeEeeeeeeeecc
Confidence 249999999999996 6799999999985 69999999999999865321 2332 3889999999999852
Q ss_pred h--HHhhhhhcCC---------CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEE-E
Q 046746 175 H--VELGKQLDSG---------KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR-I 242 (561)
Q Consensus 175 ~--~~~~~~~~~~---------~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~-i 242 (561)
+ ..+..+...+ .....++.++|||+.+.+ +..+.+++++|++||| +|++..+.+.|+ |
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~--------~~~~~l~v~~GervRl--in~~~~~~~~~~~i 251 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGAL--------TGANALTAKVGETVLL--IHSQANRDTRPHLI 251 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTT--------SGGGCEEEETTCEEEE--EEEESSSCBCEEET
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccC--------CCCcceEcCCCCEEEE--EecCCCCccceEEE
Confidence 2 2221110000 012357899999998621 1128899999997765 666666655544 5
Q ss_pred eCcccEEEeecCccccee--eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCC
Q 046746 243 QGHTMKLVEMEGSHVVQN--EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 243 ~gh~~~via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 312 (561)
+||.|+|++ ||.+++|. .++++.|.||||+||+|+++ .+|+|+++++...........|+++|.+...
T Consensus 252 ~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 252 GGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 999999998 99998764 47899999999999999999 5899999998653221245678999987653
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=7.4e-44 Score=366.36 Aligned_cols=271 Identities=17% Similarity=0.214 Sum_probs=206.4
Q ss_pred ccCCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 23 EAGSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
.+.+++++|+|++++...+ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 3456889999999999887 459999999999999999999999999999999998 67999999887644344433
Q ss_pred ccCCccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCC----CCCCCCCCCCceEEEecceee
Q 046746 101 GTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVV----PVPYNRFVEDDFTLLIGDWYT 172 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~----~~~~~~~~~~e~~l~~~d~~~ 172 (561)
.. ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++.. +.+.. .|+|++|+++||++
T Consensus 110 ~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~--~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 AL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLT--YDKIYYVGEQDFYV 185 (340)
T ss_dssp GG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEEC--CSEEEEEEEEEECC
T ss_pred cc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcC--cceeEEEeeeeeee
Confidence 22 359999999999997 5799999999986 6999999999999986431 12332 38899999999998
Q ss_pred c--chHHhhhh----------hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEE
Q 046746 173 R--SHVELGKQ----------LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240 (561)
Q Consensus 173 ~--~~~~~~~~----------~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~ 240 (561)
. .+..+..+ ++. .....++.++|||+.+.. ...+.+++++|+++||++.|++.... ..
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~--------~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~ 255 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL--------TGDHALTAAVGERVLVVHSQANRDTR-PH 255 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT--------SGGGCEEEETTCEEEEEEEESSSCBC-EE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc--------cCCCceEcCCCCEEEEEECCCCCccc-eE
Confidence 3 22222100 000 012356899999998610 01388999999988776666544333 33
Q ss_pred EEeCcccEEEeecCcccce--eeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCC
Q 046746 241 RIQGHTMKLVEMEGSHVVQ--NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 241 ~i~gh~~~via~DG~~~~p--~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 312 (561)
++++|.|+|++ ||.++.+ ..++++.|.||||+||+|+++ .+|+|+++++...........++++|.+...
T Consensus 256 ~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 256 LIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 48899999997 9998764 358999999999999999999 5899999998653221234568899987553
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.6e-40 Score=367.51 Aligned_cols=263 Identities=16% Similarity=0.177 Sum_probs=191.0
Q ss_pred CCCeEEEEEEEEEEEec--CC-----------C-eeeeE--EEE----------------CCcCCCCeEEecCCCEEEEE
Q 046746 25 GSPTFFFTWNVTYGTIS--PL-----------G-IPQQG--ILI----------------NGQFPGPNINSTTNDNLVIN 72 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~d-----------G-~~~~~--~~~----------------Ng~~pgP~i~v~~Gd~v~v~ 72 (561)
...+|+|-+-|.+..+. +. | +.+.+ ..| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 46789999999998753 22 2 22222 334 34789999999999999999
Q ss_pred EEeCCCCCeeeeeCCccCCCCCCCCCCCcc---------CCccCCCCeEEEEEEecCc-----ee----eeeEecCch--
Q 046746 73 VFNKLDEPFLLTWPGIQHKKNSWQDGVLGT---------NCPIPPGKNYTYYLQVKDQ-----IG----SYIYHPSTG-- 132 (561)
Q Consensus 73 v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~---------q~~i~PG~~~~Y~f~~~~~-----~G----t~wYH~H~~-- 132 (561)
|+|.|+++++|||||+++. +++||+|++ ||+|+||++|+|+|+++++ +| |||||||.+
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999885 579999863 8999999999999998654 57 999999996
Q ss_pred hhhccCceeEEEEecCCCCCC--CCCCCCCCceEEEec------ceeecchHHhhh-hhcCCCCCCCCCeEEEcCccCCC
Q 046746 133 FHRAAGGFGGLCIHSRSVVPV--PYNRFVEDDFTLLIG------DWYTRSHVELGK-QLDSGKLLGKPDGVLINGKSGRL 203 (561)
Q Consensus 133 ~q~~~Gl~G~liV~~~~~~~~--~~~~~~~~e~~l~~~------d~~~~~~~~~~~-~~~~~~~~~~~~~~liNG~~~~~ 203 (561)
.|+.+||+|+|||+++..... ..+. .++|++|+++ ||+++....... ..+. .....++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~-~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~-- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPV-DMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS-EVKNSHEFHAINGMIY-- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCS-SCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS--
T ss_pred ccccccCccCEEEeeCCCcccccCCCC-cceeEEEEEEeecCccccccccCcccccccCCc-chhhcCceeccCCEec--
Confidence 799999999999999754211 1122 3689999999 677654322100 0111 1123468999999985
Q ss_pred CCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCC
Q 046746 204 DYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQD 282 (561)
Q Consensus 204 ~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~ 282 (561)
+.|.+++++|++|||||+|++... .+.||+|||.|++++.|| ..++++.|.||||+||+|+++ .
T Consensus 237 ---------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~ 301 (647)
T 1sdd_B 237 ---------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-K 301 (647)
T ss_dssp ---------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-S
T ss_pred ---------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-c
Confidence 238899999999999999999865 889999999999999886 378999999999999999999 6
Q ss_pred CCceEEEEEeeccCCcceeEEEEEecC
Q 046746 283 PKDYYLIASTRFTRTVITTTAIVRYSD 309 (561)
Q Consensus 283 ~g~y~i~~~~~~~~~~~~~~ail~y~~ 309 (561)
+|.|.++++..... .....+++.+..
T Consensus 302 pG~w~~hch~~~h~-~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 302 PGWWLLDTEVGEIQ-RAGMQTPFLIVD 327 (647)
T ss_dssp SEEEEEECCCHHHH-TTTCEEEEEEEC
T ss_pred ceEeecccCccccc-ccccccceeeec
Confidence 89999998854221 122345555543
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.2e-41 Score=342.08 Aligned_cols=214 Identities=15% Similarity=0.218 Sum_probs=158.6
Q ss_pred eEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccC----CCCCCCCCCCcc---CCccCCCCeEEEEEEecC
Q 046746 48 QGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQH----KKNSWQDGVLGT---NCPIPPGKNYTYYLQVKD 120 (561)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~----~~~~~~DGv~~~---q~~i~PG~~~~Y~f~~~~ 120 (561)
+..++| ++|||+|+|++||+|+|+|+|.|+++++|||||++. .+.+++||++++ ||+|.||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 345678 689999999999999999999999999999999984 333334444332 799999999999999854
Q ss_pred c---------eeeeeEecCchh--hhccCceeEEEEecCCCC---CCCCCCCCCCceEEEecceeecchHHhhhhhcCCC
Q 046746 121 Q---------IGSYIYHPSTGF--HRAAGGFGGLCIHSRSVV---PVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGK 186 (561)
Q Consensus 121 ~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~ 186 (561)
+ +||||||||... |+.+||+|+|||+++... +.+.. .|+|++++++||... .. ..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~--~d~e~~l~~~d~d~~--~~------~~- 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKM--FEKQHVLMFAVFDES--KS------WN- 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSS--SCCCCCCBCCEEETT--SS------SS-
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCc--ccceEEEEEEecccc--cc------cc-
Confidence 4 479999999875 889999999999986421 22222 378999999998421 00 00
Q ss_pred CCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeE
Q 046746 187 LLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESL 265 (561)
Q Consensus 187 ~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v 265 (561)
...++.++|||+.+ +..|.+++++|+++||||+|++.. ..+.||++||.|.+ ||. .+|++
T Consensus 198 -~~~~~~~~ING~~~----------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv 258 (306)
T 1sdd_A 198 -QTSSLMYTVNGYVN----------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAI 258 (306)
T ss_dssp -CCCCEEECSSSCCS----------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCC
T ss_pred -cCCCcceeeCCEec----------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceE
Confidence 12357899999986 234789999999999999999987 57789999999986 773 58999
Q ss_pred EEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 266 DVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 266 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
.|.||||+||+|+++ .+|.|++++...
T Consensus 259 ~l~pger~~v~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 259 TLVSATSTTANMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp CEETTCCBC---------CCCCCBCCST
T ss_pred EECCCcEEEEEEEcC-CCeEEEEEeCCh
Confidence 999999999999998 789999988743
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=7.4e-39 Score=341.55 Aligned_cols=264 Identities=19% Similarity=0.243 Sum_probs=211.0
Q ss_pred CCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCCCcc
Q 046746 26 SPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
+.++.|+|++++....+ +|....+|+|||++|||+|++++||+++|+|.|.++ ..++|||||+. .+||++.+
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 45678899888777666 588899999999999999999999999999999985 57899999984 37998754
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
..|.||++++|.|++ +++|+||||||.+ .|+.+||+|+|+|+++.. .| . .++|++++++||++.......
T Consensus 236 -~~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P--~-~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 -TQTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP--Q-VDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp -CCBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC--C-CSEEEEEEEEEECBSSCTTCC
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC--C-CCeeEEEEecccccCCccccc
Confidence 249999999999996 5789999999974 788999999999998642 22 1 378899999999875321000
Q ss_pred h--hhc-CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc
Q 046746 180 K--QLD-SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256 (561)
Q Consensus 180 ~--~~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 256 (561)
. ..+ .......++.++|||+.+++ +..+.+++++|++|||||+|++....+.|||+||.|+||+.||++
T Consensus 309 g~~~~~~~~~~~~~~~~~~iNG~~~~~--------~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~ 380 (447)
T 2dv6_A 309 GEQEMDYEKLINEKPEYFLFNGSVGSL--------TRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV 380 (447)
T ss_dssp EECCBBHHHHHTTCCSEEEETTSTTCC--------CCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS
T ss_pred ccccCChHHhhccCCCEEEECCcccCC--------CCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc
Confidence 0 000 00001246789999998721 012579999999999999999988899999999999999999999
Q ss_pred ccee--eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 257 VVQN--EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 257 ~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
+++. .+|++.|.||||++|+|+++ ++|.|+++++.... ......++++|.+..
T Consensus 381 ~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h-~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 381 VSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSR-LEHGLVGFLNVDGPK 435 (447)
T ss_dssp SSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGG-GGGTCCEEEEECSCS
T ss_pred cCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCc-cccCCEEEEEEeCCC
Confidence 8754 58999999999999999999 69999999986543 223457899997654
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.7e-40 Score=369.37 Aligned_cols=250 Identities=14% Similarity=0.199 Sum_probs=196.9
Q ss_pred cCCCeEEEEEEEEEEEe--cCCCe---------------eeeE--EEE-CC---------------cCCCCeEEecCCCE
Q 046746 24 AGSPTFFFTWNVTYGTI--SPLGI---------------PQQG--ILI-NG---------------QFPGPNINSTTNDN 68 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~--~~dG~---------------~~~~--~~~-Ng---------------~~pgP~i~v~~Gd~ 68 (561)
-...+|+|.|.|++... +|+|. .+.+ +.| |+ ++|||+|||++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 35689999999999874 56553 1222 333 22 57999999999999
Q ss_pred EEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecC---------ceeeeeEecCchh--hhcc
Q 046746 69 LVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKD---------QIGSYIYHPSTGF--HRAA 137 (561)
Q Consensus 69 v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~ 137 (561)
|+|+|+|.|+++++|||||+++..... ||+++.||+|+||++|+|+|++++ ++||||||||.+. |+.+
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 999999999999999999999987653 699988999999999999999864 7999999999985 8999
Q ss_pred CceeEEEEecCCCCCC--CCCCCCCCceEEEecc------eeecchHHhhhhhc-CCC-------CCCCCCeEEEcCccC
Q 046746 138 GGFGGLCIHSRSVVPV--PYNRFVEDDFTLLIGD------WYTRSHVELGKQLD-SGK-------LLGKPDGVLINGKSG 201 (561)
Q Consensus 138 Gl~G~liV~~~~~~~~--~~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~-~~~-------~~~~~~~~liNG~~~ 201 (561)
||+|+|||+++..... .... .++|++|++++ |+++.. +..++. ... .....+.++|||+.+
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~-~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQV-TVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCC-SSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCc-cceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccC
Confidence 9999999999753221 1112 47899888754 544322 111111 000 011245789999986
Q ss_pred CCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeC
Q 046746 202 RLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTAN 280 (561)
Q Consensus 202 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 280 (561)
++.+.+++++|++|||||+|++... .+.|||+||.|+|++.||. .+|++.|.||||++|+|+++
T Consensus 365 ----------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 365 ----------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp ----------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS
T ss_pred ----------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC
Confidence 2347899999999999999999754 7899999999999999974 78999999999999999998
Q ss_pred CCCCceEEEEEee
Q 046746 281 QDPKDYYLIASTR 293 (561)
Q Consensus 281 ~~~g~y~i~~~~~ 293 (561)
.+|.|.++++..
T Consensus 430 -~pG~w~~hcH~~ 441 (770)
T 2r7e_B 430 -KAGIWRVECLIG 441 (770)
T ss_dssp -SCBCCCBCCCSH
T ss_pred -CCCceEEEeccc
Confidence 799999998754
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.4e-36 Score=337.12 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=167.6
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCC-----CCcc-CCccCCCCeEEEEEEecCcee-----
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG-----VLGT-NCPIPPGKNYTYYLQVKDQIG----- 123 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG-----v~~~-q~~i~PG~~~~Y~f~~~~~~G----- 123 (561)
.+|||+||+++||+|+|+|+|.|+++++|||||+++. .+++|| ++.+ ||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 466765 4444 999999999999999876554
Q ss_pred ----eeeEecCch--hhhccCceeEEEEecCCCC---CCCCCCCCCCceEEEecc------eeecchHHhhhhhc-CCCC
Q 046746 124 ----SYIYHPSTG--FHRAAGGFGGLCIHSRSVV---PVPYNRFVEDDFTLLIGD------WYTRSHVELGKQLD-SGKL 187 (561)
Q Consensus 124 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~---~~~~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~-~~~~ 187 (561)
|||||||.+ .|+.+||+|+|||+++... ..+.+ .|+|++|++++ |+++. .+..+.. ....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~--~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v 602 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIM--SDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGV 602 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSC--CSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCS
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCC--CCceEEEEeecccccccccccc--chhhcccCchhc
Confidence 999999998 4689999999999987421 11222 38899999965 54421 1111111 0000
Q ss_pred -C------CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccce
Q 046746 188 -L------GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQ 259 (561)
Q Consensus 188 -~------~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p 259 (561)
. .....++|||+.+ ++.+ +.+++|++|||||+|+|.. ..+.|||+||.|+|+ +
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~----------~~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~ 663 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVF----------DSLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------M 663 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCS----------SCCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------S
T ss_pred ccccccccccCceeeecCcCC----------CCCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------c
Confidence 0 0113578999986 1224 8999999999999998764 468999999999986 5
Q ss_pred eeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 260 NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 260 ~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
..+|+|.|.||||++|+|+++ .+|.|.++++..
T Consensus 664 ~~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 664 VYEDTLTLFPFSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp SSBCSSCCCCCSSEECCEECC-CCCCSCCEECCC
T ss_pred cceeEEEECCCcEEEEEEEcC-CCeEEEEEeCCc
Confidence 678999999999999999998 789999999865
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=2.6e-29 Score=251.42 Aligned_cols=228 Identities=15% Similarity=0.134 Sum_probs=163.7
Q ss_pred CCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 191 PDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 191 ~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
...+++||+.. .|.|+++.|+++++|+.|.... .+.+|++|.. ..+.||.+. .+...|.||
T Consensus 54 ~~~~~~ng~~p------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG 114 (288)
T 3gdc_A 54 FKGWSYNGRIP------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPG 114 (288)
T ss_dssp EEEEEETTBSS------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTT
T ss_pred EEEEEECCccC------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCC
Confidence 35899999974 3999999999999999999875 4589999975 457899864 234578999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-CC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-RT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNP 348 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p 348 (561)
+++++.++++ .+|.||.+++.... .+ .....+.+.+..... .+. .
T Consensus 115 ~~~~y~f~~~-~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~~~--~------------------------- 161 (288)
T 3gdc_A 115 QSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----RPP--A------------------------- 161 (288)
T ss_dssp CEEEEEEECC-SCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----CCC--C-------------------------
T ss_pred CEEEEEEEcC-CCccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----CCC--C-------------------------
Confidence 9999999996 89999999985421 11 112233333332210 010 0
Q ss_pred CCCCCcCCcCcceEEEEccce-e--ccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccc
Q 046746 349 QGSFHYGGIPINRTIRLANTA-H--LVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~-~--~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 425 (561)
++++.+.... . .......|+|||+.|... .
T Consensus 162 -----------d~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~~------------------------------------~ 194 (288)
T 3gdc_A 162 -----------DDEMVMVMNGYNTDGGDDNEFYSVNGLPFHFM------------------------------------D 194 (288)
T ss_dssp -----------SEEEEEEEEEECCSSTTCCSEEEETTSTTHHH------------------------------------H
T ss_pred -----------cceEEEEEeeEecCCCCCcceEEECccccccc------------------------------------C
Confidence 0111110000 0 001123489999876311 0
Q ss_pred eEEecCCCcEEEEEEEcCCCC--CCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 426 NVMDATYKAFMEIVLENRQNT--MQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
..+.++.|++|+|.|.|.+.. .|||||||+.|+|++.+.. +..|.++||+.|+||+++.|+|++++|
T Consensus 195 ~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~p 263 (288)
T 3gdc_A 195 FPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYP 263 (288)
T ss_dssp SCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSC
T ss_pred cccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCC
Confidence 114568899999999998853 5999999999999875421 233589999999999999999999999
Q ss_pred ceeeeecccchhhhccceEEEEEec
Q 046746 504 GMWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 504 G~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
|.|+||||+++|++.|||..|+|.+
T Consensus 264 G~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 264 GKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEEEEecChHHHhcCCCEEEEEeC
Confidence 9999999999999999999999863
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=6.8e-28 Score=246.75 Aligned_cols=244 Identities=13% Similarity=0.102 Sum_probs=162.6
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEee---cCcccceeeeeeEEEc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM---EGSHVVQNEYESLDVH 268 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~~~p~~~~~v~l~ 268 (561)
..+++||+.. .|+|++++|+++|+||+|..... ..+|. |-+.+.+. ||.+. ++...|.
T Consensus 24 ~~~~~NG~~p------------GP~I~v~~Gd~v~v~v~N~l~~~-~siH~--HG~~~~~~~~~DGvp~----vtq~~I~ 84 (339)
T 2zwn_A 24 KVFGFNGQVP------------GPLIHVQEGDDVIVNVTNNTSLP-HTIHW--HGVHQKGTWRSDGVPG----VTQQPIE 84 (339)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEEESSSC-BCCEE--ETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEECCccC------------CCeEEEECCCEEEEEEEECCCCC-ccEEe--CCCCcCCCcccCCCCc----cccCccC
Confidence 5799999963 29999999999999999998754 34444 55666664 99863 2345799
Q ss_pred ccceEEEEEEeCCCCCceEEEEEeeccCC-c-ceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 046746 269 VGQCFTVLVTANQDPKDYYLIASTRFTRT-V-ITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARP 346 (561)
Q Consensus 269 pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p 346 (561)
||||+++.++++ .+|+||+++......+ . ....+.+.+..... ..++.. .+.+..+.. . .+.... ...+
T Consensus 85 PG~~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~-~d~e~~l~l-~--d~~~~~-~~~~ 155 (339)
T 2zwn_A 85 AGDSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKR-VTKDVIMMM-S--TWESAV-ADKY 155 (339)
T ss_dssp TTCEEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGG-CSEEEEEEE-E--EECGGG-TTCT
T ss_pred CCCeEEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---cccccc-CCceEEEEe-e--heeccc-cccc
Confidence 999999999998 7999999987542111 1 12223232222211 111100 010000000 0 000000 0000
Q ss_pred CCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccce
Q 046746 347 NPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPN 426 (561)
Q Consensus 347 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 426 (561)
... .. .......|.|||+.|.. ..
T Consensus 156 ~~~------g~-------------~~~~~~~~~ING~~~~~-------------------------------------~~ 179 (339)
T 2zwn_A 156 GEG------GT-------------PMNVADYFSVNAKSFPL-------------------------------------TQ 179 (339)
T ss_dssp TCC------CS-------------TTSCCCEEEETTBCTTS-------------------------------------SC
T ss_pred CCC------CC-------------CccccceEEEccccCCC-------------------------------------cc
Confidence 000 00 00012347899976521 11
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++++|+|+|.+...||||||||.|+|++.+.. .+.+|.++||+.|+||+++.|+|++||||.|
T Consensus 180 ~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w 249 (339)
T 2zwn_A 180 PLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRF 249 (339)
T ss_dssp CEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEE
T ss_pred cEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeE
Confidence 256788999999999998889999999999999999532 1234788999999999999999999999999
Q ss_pred eeecccchh------hhccceEEEEEecC
Q 046746 507 NLRSNIWER------NYLGQQLYLSVRLH 529 (561)
Q Consensus 507 ~~HCHil~H------~d~GMm~~~~V~~~ 529 (561)
+||||+++| ++.|||+.+.+...
T Consensus 250 ~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 250 IFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEEechhhcccccccCCCcEEEEEECCC
Confidence 999999999 78999999998653
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=4.1e-28 Score=245.71 Aligned_cols=247 Identities=14% Similarity=0.147 Sum_probs=167.1
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEE-EeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKL-VEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|+++.|+++++|+.|... ....+|++|....- .+.||.+- +....|.||
T Consensus 23 ~~~~~ng~~p------------GP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG 85 (318)
T 3g5w_A 23 HTFAFNGQVP------------APLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPG 85 (318)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEECCccC------------CceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCC
Confidence 5799999974 399999999999999999986 45589999886542 36799763 233578999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCc--ceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTV--ITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNP 348 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p 348 (561)
++++..++++ .+|+||.+++.....+. ....+.|.+..... .+++. ..+.+..+.. .+ +..... ....
T Consensus 86 ~~~~y~f~~~-~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~-~~d~e~~l~l-~d--w~~~~~--~~~~ 155 (318)
T 3g5w_A 86 DTFTYKFKAE-PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEK-TVTKDYILML-SD--WVSSWA--NKPG 155 (318)
T ss_dssp CEEEEEEECC-SCEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHH-TCCEEEEEEE-EE--ECGGGT--TCTT
T ss_pred CEEEEEEEcC-CCEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccc-cccceeEEEE-Ee--eccccc--cccc
Confidence 9999999997 79999999885321111 12233333332210 00100 0000000000 00 000000 0000
Q ss_pred CCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEE
Q 046746 349 QGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVM 428 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 428 (561)
.+ .. .......|.|||+.|.. ...+
T Consensus 156 ~~-----~~-------------~~~~~d~~~ING~~~~~-------------------------------------~~~l 180 (318)
T 3g5w_A 156 EG-----GI-------------PGDVFDYYTINAKSFPE-------------------------------------TQPI 180 (318)
T ss_dssp CC-----CC-------------TTCCCCEEEETTBCBTS-------------------------------------SCCE
T ss_pred cC-----CC-------------CCCcCcEEEEcCcCCCC-------------------------------------CccE
Confidence 00 00 00111248999987521 1125
Q ss_pred ecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeee
Q 046746 429 DATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNL 508 (561)
Q Consensus 429 ~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~ 508 (561)
.++.|++++|+|.|.+...||||||||.|+|++++.+. +..|.++||+.|+||+++.|+|++||||.|+|
T Consensus 181 ~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~ 250 (318)
T 3g5w_A 181 RVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMI 250 (318)
T ss_dssp EECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEE
T ss_pred EeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEE
Confidence 67889999999999998899999999999999986431 23467899999999999999999999999999
Q ss_pred ecccchhhh------ccceEEEEEecCC
Q 046746 509 RSNIWERNY------LGQQLYLSVRLHK 530 (561)
Q Consensus 509 HCHil~H~d------~GMm~~~~V~~~~ 530 (561)
|||+++|++ .|||..++|...+
T Consensus 251 hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 251 HDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999998 6899999986543
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=1.2e-24 Score=219.53 Aligned_cols=232 Identities=14% Similarity=0.136 Sum_probs=137.1
Q ss_pred EEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc----eeeeeeEEEcc
Q 046746 194 VLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV----QNEYESLDVHV 269 (561)
Q Consensus 194 ~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~~~v~l~p 269 (561)
.++||... |+|++++|+++++||.|... ..+.+|.||..+. .+.||.+.. +...+...|.|
T Consensus 52 ~~~n~~pG-------------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~P 116 (306)
T 1sdd_A 52 SRTSGLLG-------------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAP 116 (306)
T ss_dssp CSSCCSCC-------------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCT
T ss_pred cccCCccC-------------CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCC
Confidence 45787655 99999999999999999875 5568888887743 267998752 12233567999
Q ss_pred cceEEEEEEeCCCC---------CceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccc
Q 046746 270 GQCFTVLVTANQDP---------KDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRW 337 (561)
Q Consensus 270 geR~dv~v~~~~~~---------g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~ 337 (561)
|||++..+++++.+ |+||.+++.....+ .+. .++|.+....... .+.+. ..+ .++..
T Consensus 117 G~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~-G~liV~~~~~~~~-~~~~~---~~d------~e~~l 185 (306)
T 1sdd_A 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLI-GPLLICKKGTLTE-DGTQK---MFE------KQHVL 185 (306)
T ss_dssp TCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCC-EEEEEECTTCBCT-TSSBS---SSC------CCCCC
T ss_pred CCeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCce-EEEEEccCCCCCc-cCCcC---ccc------ceEEE
Confidence 99999999997543 69999997432111 222 2344443221100 01110 000 00000
Q ss_pred cccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcc
Q 046746 338 NLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADE 417 (561)
Q Consensus 338 ~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~ 417 (561)
.+.... . ..++ . ......|.|||+.|.. .|
T Consensus 186 ~~~d~d--~--~~~~-------------~-----~~~~~~~~ING~~~~~--~p-------------------------- 215 (306)
T 1sdd_A 186 MFAVFD--E--SKSW-------------N-----QTSSLMYTVNGYVNGT--MP-------------------------- 215 (306)
T ss_dssp BCCEEE--T--TSSS-------------S-----CCCCEEECSSSCCSSC--CC--------------------------
T ss_pred EEEecc--c--cccc-------------c-----cCCCcceeeCCEecCC--Cc--------------------------
Confidence 000000 0 0000 0 0112347888877521 11
Q ss_pred cccccccceEEecCCCcEEEEEEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEE
Q 046746 418 IENVTLQPNVMDATYKAFMEIVLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAA 495 (561)
Q Consensus 418 ~~~~~~~~~~~~~~~g~~ve~vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~ 495 (561)
.+.++.|++++|+|.|.+. ..||||||||.|++ .| .++||+.|.||+.+.
T Consensus 216 ---------~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~ 267 (306)
T 1sdd_A 216 ---------DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTT 267 (306)
T ss_dssp ---------CCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC
T ss_pred ---------ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEE
Confidence 1346789999999999885 47999999999986 12 358999999999999
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEEecC
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
|+|.+++||.|+||||+++|++.|||..+.|.+.
T Consensus 268 v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 268 ANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp --------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999999653
No 43
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=8.3e-22 Score=218.80 Aligned_cols=243 Identities=14% Similarity=0.185 Sum_probs=146.4
Q ss_pred CceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc---e-eeeeeEEEcccceEEEEEEeCCC-----CC
Q 046746 214 EPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV---Q-NEYESLDVHVGQCFTVLVTANQD-----PK 284 (561)
Q Consensus 214 ~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p-~~~~~v~l~pgeR~dv~v~~~~~-----~g 284 (561)
.|+|++++|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 4999999999999999999874 458888887664 478998742 1 22335679999999999999864 57
Q ss_pred ----ceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCCcCCc
Q 046746 285 ----DYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGI 357 (561)
Q Consensus 285 ----~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~ 357 (561)
+||.+++.....+ .+.+ ++|.............|. .+.+..+.. .++ ......... ...
T Consensus 146 ~~c~T~wYHsH~~~~~q~~~GL~G-~lIV~~~~~~~~~~~~~~--~~~e~~l~l-~~~--d~~~~w~~~-~~~------- 211 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDIHSGLIG-PLLICRKGTLDKETNMPV--DMREFVLLF-MVF--DEKKSWYYD-KKP------- 211 (647)
T ss_dssp CSEEEEEEECCSSHHHHHTTTCEE-EEEEECTTSSCTTSCCCS--SCCEEEEEE-EEE--EGGGSSCCC-----------
T ss_pred CCceEEEEccCCCCcccccccCcc-CEEEeeCCCcccccCCCC--cceeEEEEE-Eee--cCccccccc-cCc-------
Confidence 9999998632111 2222 333333221110001111 000100000 000 000000000 000
Q ss_pred CcceEEE-EccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEE
Q 046746 358 PINRTIR-LANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFM 436 (561)
Q Consensus 358 ~~~~~~~-~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~v 436 (561)
...+. +.... ......+.|||+.|. .| .+.++.|+++
T Consensus 212 --~~~~~~~~~~~--~~~~~~~~iNG~~~~---~p-----------------------------------~l~v~~G~~v 249 (647)
T 1sdd_B 212 --TRSWRRASSEV--KNSHEFHAINGMIYN---LP-----------------------------------GLRMYEQEWV 249 (647)
T ss_dssp ----------------CCCEEEEETTBSSC---CC-----------------------------------CCEEETTCEE
T ss_pred --ccccccCCcch--hhcCceeccCCEecC---CC-----------------------------------CeEEcCCCEE
Confidence 00000 00000 011235789998751 11 1346789999
Q ss_pred EEEEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccch
Q 046746 437 EIVLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWE 514 (561)
Q Consensus 437 e~vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 514 (561)
+|+|.|.+. ..||||+|||.|+|++.+ +.++||+.|.||+++.|+|++++||.|+||||+++
T Consensus 250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~ 313 (647)
T 1sdd_B 250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE 313 (647)
T ss_dssp EEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH
T ss_pred EEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCccc
Confidence 999999874 489999999999998652 35799999999999999999999999999999999
Q ss_pred hhhccceEEEEEecCC
Q 046746 515 RNYLGQQLYLSVRLHK 530 (561)
Q Consensus 515 H~d~GMm~~~~V~~~~ 530 (561)
|++.|||..|.|.+.+
T Consensus 314 h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 314 IQRAGMQTPFLIVDRE 329 (647)
T ss_dssp HHTTTCEEEEEEECTT
T ss_pred ccccccccceeeeccc
Confidence 9999999999997543
No 44
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=2e-21 Score=197.71 Aligned_cols=243 Identities=16% Similarity=0.097 Sum_probs=161.5
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.||
T Consensus 59 ~~~~~ng~~p------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG 116 (327)
T 1kbv_A 59 RYWTFDGDVP------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPG 116 (327)
T ss_dssp EEEEETTBSS------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTT
T ss_pred EEEEECCccC------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCC
Confidence 5799999864 3999999999999999999763 46688888863 5788652 1248999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-CC---cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-RT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARP 346 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p 346 (561)
|++++.++++ .+|+||++++.... .+ .+. .+++... .. ++|. .+....+-. . ++....
T Consensus 117 ~~~~y~f~~~-~~Gt~wyH~h~~~~~~~~~~Gl~-G~~iV~~-~~-----~~p~--~d~e~~l~~-~--d~~~~~----- 178 (327)
T 1kbv_A 117 RTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMY-GLILVEP-KE-----GLPK--VDKEFYIVQ-G--DFYTKG----- 178 (327)
T ss_dssp EEEEEEEECC-SCEEEEEECCCSSHHHHHHTTCE-EEEEEEC-TT-----CCCC--CSEEEEEEE-E--EECBSS-----
T ss_pred CEEEEEEECC-CCeEEEEEeCCCChhhhhhcceE-EEEEEec-CC-----CCCC--CceEEEEEe-e--eeeccC-----
Confidence 9999999998 58999999874211 11 122 2333332 21 1221 110000000 0 010000
Q ss_pred CCCCCCCcCCcCcceEEEEccc-eeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccc
Q 046746 347 NPQGSFHYGGIPINRTIRLANT-AHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425 (561)
Q Consensus 347 ~p~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 425 (561)
.. + ......+... .....+ ..+.|||+.+... ..
T Consensus 179 ~~-~--------~~g~~~~~~~~~~~~~~-~~~~iNG~~~~~~-----------------------------------~~ 213 (327)
T 1kbv_A 179 KK-G--------AQGLQPFDMDKAVAEQP-EYVVFNGHVGALT-----------------------------------GD 213 (327)
T ss_dssp CT-T--------CCEEECBCHHHHHHTCC-SEEEETTSTTTTS-----------------------------------GG
T ss_pred cc-c--------cccccccChhHhccCCC-ceEEEcCcccCCC-----------------------------------Cc
Confidence 00 0 0000000000 000111 2478888764210 01
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 426 NVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
..+.++.|++++|+|.|.+ ...|+||||||.|+||+.+++.. .|.++||+.|.||+.+.|.|++++||
T Consensus 214 ~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG 282 (327)
T 1kbv_A 214 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPG 282 (327)
T ss_dssp GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCE
T ss_pred eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCe
Confidence 2356788999999999987 57899999999999999975421 25789999999999999999999999
Q ss_pred eeeeecccchhh-hccceEEEEEecCC
Q 046746 505 MWNLRSNIWERN-YLGQQLYLSVRLHK 530 (561)
Q Consensus 505 ~w~~HCHil~H~-d~GMm~~~~V~~~~ 530 (561)
.|+||||+..|. ..||++.+.|....
T Consensus 283 ~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 283 NYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999995 88999999997554
No 45
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=9.8e-21 Score=194.10 Aligned_cols=257 Identities=14% Similarity=0.135 Sum_probs=154.9
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCC-CceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGV-KTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|++++|+++++|+.|... ...+.++++++.. +.||..+. .|.||
T Consensus 60 ~~~~~ng~~p------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~~-------~i~PG 117 (340)
T 2bw4_A 60 HAMTFNGSVP------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGALT-------QVNPG 117 (340)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTT
T ss_pred EEEEECCCCC------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccce-------EeCCC
Confidence 5799999963 399999999999999999973 2455677776542 23443321 39999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-----CCcceeEEEEEecCCCCCCCCCCCCCCCCccccccc-cccccccccccCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-----RTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ-FRSFRWNLTASAA 344 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~-~~~~~~~l~~~~~ 344 (561)
|++++.++++ .+|+||.+++.... .....+ +++.+....... ..+. |..++..... ..+ +.+.
T Consensus 118 ~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G-~~iV~~~~~~~~--~~~~-p~~~d~e~~l~l~D--~~~~---- 186 (340)
T 2bw4_A 118 EETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNG-AIMVLPRDGLKD--EKGQ-PLTYDKIYYVGEQD--FYVP---- 186 (340)
T ss_dssp EEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEE-EEEEECTBCEEC--TTSC-EECCSEEEEEEEEE--ECCC----
T ss_pred CEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEE-EEEEccCcCccc--ccCC-CcCcceeEEEeeee--eeec----
Confidence 9999999998 59999999985311 112222 233332211100 0110 1111100000 000 0000
Q ss_pred CCCCCCCCC-cCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccc
Q 046746 345 RPNPQGSFH-YGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTL 423 (561)
Q Consensus 345 ~p~p~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 423 (561)
..+.+.+. +... . ....-............|.|||+.|...
T Consensus 187 -~~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~iNG~~~~~~----------------------------------- 228 (340)
T 2bw4_A 187 -KDEAGNYKKYETP-G-EAYEDAVKAMRTLTPTHIVFNGAVGALT----------------------------------- 228 (340)
T ss_dssp -BCTTSCBCCCCSH-H-HHHHHHHHHHHTTCCSEEEETTSTTTTS-----------------------------------
T ss_pred -cccCCcccccccc-c-ccccchhhHhhcCCCCEEEECCccCCcc-----------------------------------
Confidence 00000000 0000 0 0000000000001112478998875311
Q ss_pred cceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEEEeCCCcEEEEEEEeCC
Q 046746 424 QPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 424 ~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv~vp~~g~~~irf~adn 502 (561)
....+.++.|++++|++.|.+...|++|+|||.|+|+.. |.+. ..|. ++||+.|.+|+.+.|.|.+++
T Consensus 229 ~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~ 297 (340)
T 2bw4_A 229 GDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWAT--GKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQ 297 (340)
T ss_dssp GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEETT--CCTT---------SCCEEEESCCCBCTTEEEEEEEECCS
T ss_pred CCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeCC--Cccc---------CCccccceEEEeCCCceEEEEEECCC
Confidence 012356788999998888877788999999999999863 3221 1122 479999999999999999999
Q ss_pred cceeeeecccc-hhhhccceEEEEEecCC
Q 046746 503 AGMWNLRSNIW-ERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 503 pG~w~~HCHil-~H~d~GMm~~~~V~~~~ 530 (561)
||.|+||||++ +|++.|||+.++|...+
T Consensus 298 pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 298 PGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 99999999999 59999999999997654
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=9.6e-22 Score=219.82 Aligned_cols=244 Identities=13% Similarity=0.114 Sum_probs=151.0
Q ss_pred CceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCC---------CCC
Q 046746 214 EPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQ---------DPK 284 (561)
Q Consensus 214 ~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~---------~~g 284 (561)
.|+|+++.|++++++|.|... ..+.+|.||..+.....||.+- + ...|.||++++..+++.+ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-~----~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-R----KNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-T----SSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-c----cCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 499999999999999999986 4568888887765544468752 1 246899999999998875 568
Q ss_pred ceEEEEEeeccCC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccc--cc-cccccccccC--CCCCCCCCCCcCCcC
Q 046746 285 DYYLIASTRFTRT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ--FR-SFRWNLTASA--ARPNPQGSFHYGGIP 358 (561)
Q Consensus 285 ~y~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~--~~-~~~~~l~~~~--~~p~p~~~~~~~~~~ 358 (561)
.||.+++.....+ .....+.|.+...........+. ..+.+..+.. .. ...+-+.... ..+.|.. +..
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~~~---- 345 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQ-VTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-IQM---- 345 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCC-CSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-CCS----
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCC-ccceEEEEEEeecCccccchhccchhhcccCccc-ccc----
Confidence 9999887543111 11222333333222110000000 0010000000 00 0000000000 0000000 000
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEE
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~ 438 (561)
.+.. |. .....|.|||..|.. ...+.++.|++++|
T Consensus 346 ~d~~--~~------~~~~~~~ING~~~~~-------------------------------------~~~l~v~~Ge~vr~ 380 (770)
T 2r7e_B 346 EDPT--FK------ENYRFHAINGYIMDT-------------------------------------LPGLVMAQDQRIRW 380 (770)
T ss_dssp SSSS--ST------TTSCEECTTSCTTTT-------------------------------------CCCCCCCSSSCEEE
T ss_pred CCcc--cc------ccCCccccCCccCCC-------------------------------------CCCeEEeCCCEEEE
Confidence 0000 00 111236677765421 11245688999999
Q ss_pred EEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhh
Q 046746 439 VLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERN 516 (561)
Q Consensus 439 vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~ 516 (561)
+|.|.+. ..||||||||.|+|++.+ | .++||+.|+|++++.|+|++|+||.|+||||+++|+
T Consensus 381 rliN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~ 444 (770)
T 2r7e_B 381 YLLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHL 444 (770)
T ss_dssp ECCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHH
T ss_pred EEEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecccccc
Confidence 9999874 489999999999998764 1 279999999999999999999999999999999999
Q ss_pred hccceEEEEEecCC
Q 046746 517 YLGQQLYLSVRLHK 530 (561)
Q Consensus 517 d~GMm~~~~V~~~~ 530 (561)
+.|||..|.|...+
T Consensus 445 ~~GM~~~~~V~s~~ 458 (770)
T 2r7e_B 445 HAGMSTLFLVYSNK 458 (770)
T ss_dssp TTBCCCCCCBCCSS
T ss_pred cccccccccccccc
Confidence 99999999985443
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.82 E-value=2.4e-19 Score=183.11 Aligned_cols=258 Identities=11% Similarity=0.059 Sum_probs=148.3
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|.|++++|+++++|+.|.+.. ..+.++++++. ..||.. +. . .|.||
T Consensus 53 ~~~~~ng~~p------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~PG 110 (333)
T 1mzy_A 53 QAMTFDGSIP------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINPG 110 (333)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCTT
T ss_pred EEEEECCccC------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCCC
Confidence 5789999974 3999999999999999999642 12344444321 123221 11 1 38999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeec------cCCcceeEEEEEecCCCCCCCCCCCCCCCCcccccc-ccccccccccccC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRF------TRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLN-QFRSFRWNLTASA 343 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~-~~~~~~~~l~~~~ 343 (561)
+++++.++++ .+|.||.+++... ......+.-+++ .....+ .+.+. |..++..+. ...+ +.+..
T Consensus 111 ~~~~y~f~~~-~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~-~~~~~~--~~~~~-p~~~d~e~~l~l~D--~~~~~-- 181 (333)
T 1mzy_A 111 EKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVL-PRDGLK--DHEGK-PVRYDTVYYIGESD--HYIPK-- 181 (333)
T ss_dssp EEEEEEEECC-SCEEEEEECCCSTTHHHHHHHTTCEEEEEEE-CTTCCB--CTTSC-BCCCSEEEEEEEEE--ECCCB--
T ss_pred CEEEEEEECC-CCEEEEEeecCCcccchhhhhCCCEEEEEEc-cCcCcc--ccccC-CCccchheeeeeee--eccCc--
Confidence 9999999997 6999999998531 111223332332 211110 01100 111110000 0000 00000
Q ss_pred CCCCCCCCCC-cCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccccccc
Q 046746 344 ARPNPQGSFH-YGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVT 422 (561)
Q Consensus 344 ~~p~p~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 422 (561)
...+.+. +... . ..+.-............|.|||+.+..+
T Consensus 182 ---~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ING~~~~~~---------------------------------- 222 (333)
T 1mzy_A 182 ---DEDGTYMRFSDP-S-EGYEDMVAVMDTLIPSHIVFNGAVGALT---------------------------------- 222 (333)
T ss_dssp ---CTTSCBCCCSSH-H-HHHHHHHHHHTTTCCSEEEETTSTTTTS----------------------------------
T ss_pred ---cccccccccccc-c-ccccchhHHhhccCCcEEEECCcccccC----------------------------------
Confidence 0000000 0000 0 0000000000001113478898764211
Q ss_pred ccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEEEeCCCcEEEEEEEeC
Q 046746 423 LQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 423 ~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv~vp~~g~~~irf~ad 501 (561)
+...+.++.|++++|++.|.+...|++++|+|.|+|++ + |.+.+ .|. ++||+.|.||+.+.+.|.++
T Consensus 223 -~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v~a~ 290 (333)
T 1mzy_A 223 -GEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALYKFL 290 (333)
T ss_dssp -GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEEECC
T ss_pred -CCcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEEEcC
Confidence 01225678899988877776555556667888899987 3 43211 122 58999999999999999999
Q ss_pred Ccceeeeecccchhh-hccceEEEEEecCCc
Q 046746 502 NAGMWNLRSNIWERN-YLGQQLYLSVRLHKR 531 (561)
Q Consensus 502 npG~w~~HCHil~H~-d~GMm~~~~V~~~~~ 531 (561)
+||.|+||||++.|+ +.|||..++|....+
T Consensus 291 ~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 291 QPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp SCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 999999999999997 999999999986543
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.79 E-value=1.9e-18 Score=183.44 Aligned_cols=247 Identities=15% Similarity=0.089 Sum_probs=162.2
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|.|+++.|++++||+.|.... ..+.+|+||+. ..||... +..|.||
T Consensus 49 ~~~~~ng~~p------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg 106 (442)
T 2zoo_A 49 VFWSFGETVP------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPG 106 (442)
T ss_dssp EEEEETTBSS------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTT
T ss_pred EEEEECCcCC------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCC
Confidence 5799999973 3999999999999999999653 56789999975 3687642 2358999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeec-cCC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRF-TRT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNP 348 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p 348 (561)
+++++.++++ .+|.||++++... ..+ .....+.+.+.... ++|. .+.+..+.. .+ +.+...
T Consensus 107 ~~~~y~f~~~-~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~--~d~e~~l~l-~d--~~~~~~------ 169 (442)
T 2zoo_A 107 HTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP--VDREYYLVQ-GD--FYTKGE------ 169 (442)
T ss_dssp CEEEEEEECC-SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC--CSEEEEEEE-EE--ECBSSC------
T ss_pred CEEEEEEEcC-CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC--CCceEEEEe-ee--eeccCc------
Confidence 9999999997 6999999995321 111 11223444443321 1221 111100000 00 100000
Q ss_pred CCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEE
Q 046746 349 QGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVM 428 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 428 (561)
.+. . ....+............+.|||+.+... ....+
T Consensus 170 ~~~-------~-~~~~~~~~~~~~~~~~~~liNG~~~~~~-----------------------------------~~~~l 206 (442)
T 2zoo_A 170 FGE-------A-GLQPFDMAKAIDEDADYVVFNGSVGSTT-----------------------------------DENSL 206 (442)
T ss_dssp TTC-------C-EEECBCHHHHHTTCCSEEEETTSTTTTS-----------------------------------GGGCE
T ss_pred ccc-------c-ccccCChhHhccCCCCEEEECCCcCCCC-----------------------------------CCCce
Confidence 000 0 0000000000001112467888764210 01135
Q ss_pred ecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 429 DATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 429 ~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
.++.|++++|+|.|.+ ...|+||+||+.|+|++.+++.. .|.+.|++.|.||+.+.+.|.+++||.|+
T Consensus 207 ~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~ 275 (442)
T 2zoo_A 207 TAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFI 275 (442)
T ss_dssp EEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEE
T ss_pred EeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEE
Confidence 6788999999999976 57899999999999999864321 25688999999999999999999999999
Q ss_pred eecccchh-hhccceEEEEEecCCc
Q 046746 508 LRSNIWER-NYLGQQLYLSVRLHKR 531 (561)
Q Consensus 508 ~HCHil~H-~d~GMm~~~~V~~~~~ 531 (561)
+|||.+.| .+.||+..+.|...+.
T Consensus 276 ~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 276 LVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEecccccccccCceEEEEecCCCC
Confidence 99999999 5999999999976654
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.76 E-value=3.2e-17 Score=167.62 Aligned_cols=257 Identities=13% Similarity=0.158 Sum_probs=152.4
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|++++|+++++|+.|.... ..+.++++++.. +.||..+. .|.||
T Consensus 54 ~~~~~ng~~p------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG 111 (336)
T 1oe1_A 54 QAMTFNGSMP------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPG 111 (336)
T ss_dssp EEEEETTBSS------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTT
T ss_pred EEEEECCccC------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCC
Confidence 5799999863 3999999999999999998752 456788888753 22333221 38999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-----CCcceeEEEEEecCCCCCCCCCCCCCCCCccccccc-cccccccccccCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-----RTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ-FRSFRWNLTASAA 344 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~-~~~~~~~l~~~~~ 344 (561)
++++..++++ .+|+||.+++.... ...+.+.-+++-. ...+ .+.+. |..++..+.. ..+ +.+..
T Consensus 112 ~~~~y~f~~~-~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~-~~~~--~~~~~-~~~~D~e~~l~~~D--~~~~~--- 181 (336)
T 1oe1_A 112 EQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR-DGLK--DPQGK-PLHYDRAYTIGEFD--LYIPK--- 181 (336)
T ss_dssp EEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECT-TCCB--CTTSC-BCCCSEEEEEEEEE--ECCCB---
T ss_pred CEEEEEEECC-CCeEEEEecCCCCchhHHHhCCCeEEEEEecC-cCCc--ccccC-cccCCceeEeeeee--eeecc---
Confidence 9999999998 59999999985311 1122232233321 1110 11111 1111100000 000 00000
Q ss_pred CCCCCCCCC-cCCcC-cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccccccc
Q 046746 345 RPNPQGSFH-YGGIP-INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVT 422 (561)
Q Consensus 345 ~p~p~~~~~-~~~~~-~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 422 (561)
...+.+. +.... .... .+.. .....+ ..+.|||+.+...
T Consensus 182 --~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~-~~~liNG~~~~~~---------------------------------- 222 (336)
T 1oe1_A 182 --GPDGKYKDYATLAESYGD-TVQV-MRTLTP-SHIVFNGKVGALT---------------------------------- 222 (336)
T ss_dssp --CTTSSBCCCSSTGGGHHH-HHHH-HHTTCC-SEEEETTSTTTTS----------------------------------
T ss_pred --ccCCceeecccccccccc-hhhH-hhcCCC-CEEEECCeeccCC----------------------------------
Confidence 0000000 00000 0000 0000 000011 2467888654211
Q ss_pred ccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCC-CceeEEEeCCCcEEEEEEEeC
Q 046746 423 LQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA-VSRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 423 ~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P-~~rDTv~vp~~g~~~irf~ad 501 (561)
+...+.++.|++++|+..+.+...+++++|||.|.|+. .|.+. ..| .+.||+.|++|+.+.+.+.++
T Consensus 223 -~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~---------~p~~~~~dtv~i~pGer~dvlv~~~ 290 (336)
T 1oe1_A 223 -GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA---------NPPQRDLETWFIRGGSAGAALYTFK 290 (336)
T ss_dssp -GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECC
T ss_pred -CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc---------CCccccceEEEECCCCcEEEEEEcC
Confidence 11235678899988866666556677777999999986 34321 112 246999999999999999999
Q ss_pred Ccceeeeecccchhh-hccceEEEEEecCCc
Q 046746 502 NAGMWNLRSNIWERN-YLGQQLYLSVRLHKR 531 (561)
Q Consensus 502 npG~w~~HCHil~H~-d~GMm~~~~V~~~~~ 531 (561)
+||.|+||||.+.|. +.||+..++|....+
T Consensus 291 ~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 291 QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 999999999999886 999999999976543
No 50
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.65 E-value=7.3e-15 Score=155.68 Aligned_cols=236 Identities=14% Similarity=0.141 Sum_probs=153.1
Q ss_pred eEEEEEEEEEEEecCCC-----------eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeee-CCccCCCCC
Q 046746 28 TFFFTWNVTYGTISPLG-----------IPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTW-PGIQHKKNS 94 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~dG-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~ 94 (561)
.+++.|.+++.....+| .....+++||+. .|+|+|++| ++++||.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 46777888776554433 345689999995 799999999 99999999984 5688999 8875543 4
Q ss_pred CCCCCCc----c--CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCce-----------eEEE-EecCCCCCCCCC
Q 046746 95 WQDGVLG----T--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGF-----------GGLC-IHSRSVVPVPYN 156 (561)
Q Consensus 95 ~~DGv~~----~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~li-V~~~~~~~~~~~ 156 (561)
+.||.+. . +..|.|||++++.++++ +.|+||++++........+. .+++ +.........
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 6899743 1 67799999999999974 68999999986533221111 1111 1111000000
Q ss_pred CCCCCceEEEecceeecch-HHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC
Q 046746 157 RFVEDDFTLLIGDWYTRSH-VELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK 235 (561)
Q Consensus 157 ~~~~~e~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~ 235 (561)
..+.+..|..+..... ......+... ..++|||+.+. .+.+.+.++.|++++|+|+|.
T Consensus 306 ---~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~---------~~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 ---TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWD---------VNRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp -----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCC---------TTCCCEEEETTCEEEEEEEEE---
T ss_pred ---cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCC---------CCCCcEEcCCCCEEEEEEECC---
Confidence 0000000000000000 0000000000 04679999862 123578999999999999997
Q ss_pred ceEEEEEeCcccEEEeecCccc---ceeeeeeEEEcccceEEEEEEeCCCCCc----eEEEEEee
Q 046746 236 TSLNFRIQGHTMKLVEMEGSHV---VQNEYESLDVHVGQCFTVLVTANQDPKD----YYLIASTR 293 (561)
Q Consensus 236 ~~~~~~i~gh~~~via~DG~~~---~p~~~~~v~l~pgeR~dv~v~~~~~~g~----y~i~~~~~ 293 (561)
..+.||||||.|+|++.||.+. +|...|++.+ |+++.|.++++ ++|. |.++|+..
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCch
Confidence 4789999999999999999875 4678999999 99999999998 5665 99999854
No 51
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.62 E-value=6.1e-15 Score=156.02 Aligned_cols=241 Identities=13% Similarity=0.130 Sum_probs=162.1
Q ss_pred eEEEEEEEEEEEecC------------CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCC
Q 046746 28 TFFFTWNVTYGTISP------------LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNS 94 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~------------dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 94 (561)
.+++.|.+++-.... .|.....+++||+. .|.|+|++| ++++||.|... ....+|++|..+.. .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 467777776643321 13445689999996 799999999 99999999984 46899999976543 4
Q ss_pred CCCCCCcc------CCccCCCCeEEEEEEecCceeeeeEecCchhh--hc-cCc--------------eeEEEEecCC-C
Q 046746 95 WQDGVLGT------NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH--RA-AGG--------------FGGLCIHSRS-V 150 (561)
Q Consensus 95 ~~DGv~~~------q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~~~~-~ 150 (561)
+.||.+.. ...|.|||+++..+++ +++|.||++|+.... .. .|| ....+++-.. .
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 68997641 4569999999999996 459999999974311 10 122 1222232211 1
Q ss_pred CCCCCCCCCCCceEEEecceeecc-hHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEE
Q 046746 151 VPVPYNRFVEDDFTLLIGDWYTRS-HVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRI 229 (561)
Q Consensus 151 ~~~~~~~~~~~e~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRl 229 (561)
.+.+.+. . . .-+.+..... ...+. +..+. ....+.|||+.+. ...+.+.++.|++++|+|
T Consensus 302 ~~~~~p~---~-l-~~~~~l~~~~~~r~~~--l~~~~---~g~~~~iNg~~~~---------~~~~~~~~~~g~~~~~~~ 362 (439)
T 2xu9_A 302 KPLPLPK---A-L-SPFPTLPAPVVTRRLV--LTEDM---MAARFFINGQVFD---------HRRVDLKGQAQTVEVWEV 362 (439)
T ss_dssp CCCCCCS---C-C-CCCCCCCCCSEEEEEE--EEEEG---GGTEEEETTBCCC---------TTCCCEEECTTCEEEEEE
T ss_pred ccccCcc---c-C-CCcccCCCCCcceEEE--EEeec---cCceEeECCEECC---------CCCCceecCCCCEEEEEE
Confidence 1111100 0 0 0000000000 00000 00000 1136899999871 122458999999999999
Q ss_pred EEcCCCceEEEEEeCcccEEEeecCccc-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 230 CNVGVKTSLNFRIQGHTMKLVEMEGSHV-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 230 iN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
.|.+. ..|.||||||.|+|++.+|... .|...|++.+.||+++.|.++++ .||.|.++++..
T Consensus 363 ~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 363 ENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp EECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred EcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 99876 5679999999999999999875 47889999999999999999977 899999999854
No 52
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.61 E-value=1.9e-16 Score=133.29 Aligned_cols=90 Identities=21% Similarity=0.290 Sum_probs=71.0
Q ss_pred CcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCC--CCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 54 GQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKN--SWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 54 g~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
-+|++|+|++++||+|+ ++|..+..+++||||..+... ..+||.+..++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 36789999999999975 679988999999999865321 0123222225789999999999985468999999999
Q ss_pred hhhhccCceeEEEEec
Q 046746 132 GFHRAAGGFGGLCIHS 147 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (561)
.+..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 456789999999974
No 53
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.55 E-value=6.5e-14 Score=150.54 Aligned_cols=259 Identities=13% Similarity=0.131 Sum_probs=163.6
Q ss_pred EEEEEEEEEEecCCCe-----eeeEEEECCcCC--------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCC
Q 046746 30 FFTWNVTYGTISPLGI-----PQQGILINGQFP--------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSW 95 (561)
Q Consensus 30 ~~~l~~~~~~~~~dG~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~ 95 (561)
++.|.+++-....++. ....+++||+.. .|+|+|++|+++++||.|... ....+|++|..+.. .+
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 5566666554433332 245789999853 289999999999999999984 56789998876543 46
Q ss_pred CCCCCcc-----CCccCCCCeEEEEEEecCceeeeeEecCchh--h-----hccCceeEEEEecCCCCCCCCCCCCCCce
Q 046746 96 QDGVLGT-----NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF--H-----RAAGGFGGLCIHSRSVVPVPYNRFVEDDF 163 (561)
Q Consensus 96 ~DGv~~~-----q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~~e~ 163 (561)
.||.+.. ...|.|||+++..+++++.+|.||.+++... + ...|+..+++.........+... ...+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~-~~~~~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS-ANPNP 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCC-CCSSC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCC-CCCcc
Confidence 8997531 4568999999999997555799999987531 1 22344344444332111111000 00000
Q ss_pred EEEecceeecch--HHh---------hhhhcCCCCCCCCCeEEEcCccCCCCCCC------CCC------CCCCceEEEE
Q 046746 164 TLLIGDWYTRSH--VEL---------GKQLDSGKLLGKPDGVLINGKSGRLDYDS------DGK------GDNEPLFTMK 220 (561)
Q Consensus 164 ~l~~~d~~~~~~--~~~---------~~~~~~~~~~~~~~~~liNG~~~~~~~~~------~~~------~~~~p~~~v~ 220 (561)
..+.+..+... ... ...+...... ....+.|||+.+...... ++. ......++++
T Consensus 301 -~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~ 378 (503)
T 1hfu_A 301 -AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGF-SGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELP 378 (503)
T ss_dssp -CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEE-ETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEEC
T ss_pred -CCCccccccccCccCCCCcccCCcceEEEEEEeec-cCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEcc
Confidence 00011100000 000 0000000000 012689999986210000 000 0113578999
Q ss_pred cCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc----cceeeeeeEEE-cccceEEEEEEeCCCCCceEEEEEee
Q 046746 221 AGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH----VVQNEYESLDV-HVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 221 ~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
.|++++++++|......|.||||||.|+|++.+|.. ..|...|++.+ .||+++.|.++++ +||.|.++++..
T Consensus 379 ~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 379 RNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 999999999965445678999999999999999875 25789999999 8999999999998 899999999854
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.55 E-value=1.3e-13 Score=148.64 Aligned_cols=238 Identities=15% Similarity=0.187 Sum_probs=154.3
Q ss_pred eeEEEECCcCC---------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCe
Q 046746 47 QQGILINGQFP---------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKN 111 (561)
Q Consensus 47 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~ 111 (561)
...+++||+.. -|+|+|++|+++++||.|... ....+|++|..+.. .+.||.+.. ...|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999853 189999999999999999984 56789999976543 468997531 456999999
Q ss_pred EEEEEEecCceeeeeEecCchh---hhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecch--H---------H
Q 046746 112 YTYYLQVKDQIGSYIYHPSTGF---HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSH--V---------E 177 (561)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~--~---------~ 177 (561)
++..+++++.+|.||.+++... ....|+..+++.........+... ..+ ...+.+..+... . .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~--~~~-~~~~~~~~l~p~~~~~~p~~~~~~~ 346 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTS--QNS-GTALNEANLIPLINPGAPGNPVPGG 346 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCC--CCC-SCBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCC--CCc-ccccchhhcccCCcccCCCcccCCc
Confidence 9999997555799999997541 122344344544432211111100 000 000000000000 0 0
Q ss_pred hhh--hhcCCCCCCCCCeEEEcCccCCCCCCC------CCC------CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEe
Q 046746 178 LGK--QLDSGKLLGKPDGVLINGKSGRLDYDS------DGK------GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQ 243 (561)
Q Consensus 178 ~~~--~~~~~~~~~~~~~~liNG~~~~~~~~~------~~~------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~ 243 (561)
... .+..+.. .....+.|||+.+...... ++. ....+.++++.|++++|+++| ...|.||||
T Consensus 347 ~~~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLH 422 (521)
T 1v10_A 347 ADINLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLH 422 (521)
T ss_dssp SSEEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEES
T ss_pred ceEEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEc
Confidence 000 0000000 0112688999986210000 000 012367899999999999999 356799999
Q ss_pred CcccEEEeecCcc----cceeeeeeEEE-cccceEEEEEEeCCCCCceEEEEEee
Q 046746 244 GHTMKLVEMEGSH----VVQNEYESLDV-HVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 244 gh~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
||.|+|++.+|.. ..|...|++.+ .||+++.|.++++ +||.|.++++..
T Consensus 423 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~ 476 (521)
T 1v10_A 423 GHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHID 476 (521)
T ss_dssp SCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChH
Confidence 9999999999875 35789999999 8999999999998 899999999854
No 55
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.53 E-value=4.1e-14 Score=140.21 Aligned_cols=99 Identities=19% Similarity=0.336 Sum_probs=84.1
Q ss_pred EEECCcC--CCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------c-c-CCccCCCCeEEEEEEe
Q 046746 50 ILINGQF--PGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------G-T-NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~-~-q~~i~PG~~~~Y~f~~ 118 (561)
|+|||+. ++|.|++++||+|+++|.|.....+++||||...... .||.. . . .+.|.||++++|.|+.
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6899998 8999999999999999999998899999999765432 34431 1 1 4669999999999996
Q ss_pred cC--ceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 119 KD--QIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 119 ~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
.. .+|+||||||...+...||.|.++|++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 32 699999999999999999999999999754
No 56
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.46 E-value=1.5e-12 Score=139.06 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=153.1
Q ss_pred eeEEEECCcC---------CCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCe
Q 046746 47 QQGILINGQF---------PGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKN 111 (561)
Q Consensus 47 ~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~ 111 (561)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|..+.. .+.||.+.. ...|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4679999962 347999999999999999986 456789998876543 568997532 456999999
Q ss_pred EEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH-----------
Q 046746 112 YTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE----------- 177 (561)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~----------- 177 (561)
++..+++.+..|.||.++... .....|...+++.........+......... ..+.+..+..-..
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCC
Confidence 999999755579999998643 1122233334444432211111100000000 0001110000000
Q ss_pred hhhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCC------CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeC
Q 046746 178 LGKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGK------GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG 244 (561)
Q Consensus 178 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~g 244 (561)
....+..... .....+.|||+.+.. ... ++. ......+.++.|++++|.|.|......|.||+||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~-~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTP-PTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCC-CSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCC-CCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 0000000000 012368899998621 000 010 0123578999999999999843444677999999
Q ss_pred cccEEEeecCccc----ceeeeeeEEEcc-cceEEEEEEeCCCCCceEEEEEee
Q 046746 245 HTMKLVEMEGSHV----VQNEYESLDVHV-GQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 245 h~~~via~DG~~~----~p~~~~~v~l~p-geR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
|.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +||.|.++++..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999999988653 588899999997 99999999998 899999999854
No 57
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.45 E-value=1.9e-12 Score=137.50 Aligned_cols=242 Identities=15% Similarity=0.106 Sum_probs=157.7
Q ss_pred EEEEEEEEEEEecCCCe-------------eeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCC
Q 046746 29 FFFTWNVTYGTISPLGI-------------PQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNS 94 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~ 94 (561)
.+| |.++......+|. ....+++||+. .|+|.|++|+ ++|+.|.. .....+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 455 7776665544443 34679999996 6899999999 99999997 567899999976543 5
Q ss_pred CCCCCCc----c--CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCce--------eEEEEecC-CCCCCCC----
Q 046746 95 WQDGVLG----T--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGF--------GGLCIHSR-SVVPVPY---- 155 (561)
Q Consensus 95 ~~DGv~~----~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~--------G~liV~~~-~~~~~~~---- 155 (561)
+.||... . ...|.|||+++..++. .+.|+|..-++.... .|+. -.+-++.. ...+.|.
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 7897432 1 5669999999999996 457777766653211 1111 11112111 1111111
Q ss_pred -CCC--CCCceEEEecceeecchHHhhhhhcCCCCC---CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEE
Q 046746 156 -NRF--VEDDFTLLIGDWYTRSHVELGKQLDSGKLL---GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRI 229 (561)
Q Consensus 156 -~~~--~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRl 229 (561)
+.. .+.+..+.++.... .+..+...+... .....++|||+.+. .+.+.++++.|++++|+|
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~iNG~~~~---------~~~~~~~~~~G~~v~w~l 399 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHM----QMHGMMGKSEGELKIALASMFLINRKSYD---------LKRIDLSSKLGVVEDWIV 399 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCS----TTTTGGGCCHHHHHHHHHTTEEETTBCCC---------TTCCCEEEETTCCEEEEE
T ss_pred CCCCCCCCcEEEEEEeccch----hcccccccccccccccccceeEECCEeCC---------CCCceEEeCCCCEEEEEE
Confidence 000 11222222221100 000000000000 00124999999871 134789999999999999
Q ss_pred EEcCCCceEEEEEeCcccEEEee--cCcccc---eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 230 CNVGVKTSLNFRIQGHTMKLVEM--EGSHVV---QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 230 iN~~~~~~~~~~i~gh~~~via~--DG~~~~---p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+|.+. ..|.||||||.|+|++. +|.... +...|++.+.||+++.|.++++ .+|.|.++++..
T Consensus 400 ~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 400 INKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred EcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 99765 56799999999999999 998763 5689999999999999999997 899999999754
No 58
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.43 E-value=5.5e-13 Score=119.68 Aligned_cols=98 Identities=18% Similarity=0.229 Sum_probs=72.7
Q ss_pred CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCC------CCcc--CCccCCCC--eEE
Q 046746 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG------VLGT--NCPIPPGK--NYT 113 (561)
Q Consensus 44 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG------v~~~--q~~i~PG~--~~~ 113 (561)
|...+-+.++|. ++|+|+|++||+|+|+++|... ...|.+.+.+.++++.+. .... ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444444555666 5799999999999999999732 346777666544443221 1110 12689999 999
Q ss_pred EEEEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 114 YYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 114 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99994 89999999999889999999999985
No 59
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.42 E-value=8.9e-13 Score=112.10 Aligned_cols=105 Identities=15% Similarity=0.061 Sum_probs=79.2
Q ss_pred EEEEEEEEEEEe-----cCCCeeeeE-EEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 29 FFFTWNVTYGTI-----SPLGIPQQG-ILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 29 ~~~~l~~~~~~~-----~~dG~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
++|.+.+.+... ..+|..... ..||++|++|.|++++||+|+++++|.... +||+.... .| +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~---~ 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FG---V 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GT---E
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CC---c
Confidence 456666665443 234666555 589999999999999999999999999765 55654321 12 2
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEec
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+..+.||++++|.|+ ++++|+||||||.+..... |.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~-~~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFT-ADKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEE-CCSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEE-CCCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 467999999999999 4789999999998754333 999999974
No 60
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.41 E-value=4.6e-12 Score=135.34 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=151.3
Q ss_pred eeEEEECCcC--------CCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeE
Q 046746 47 QQGILINGQF--------PGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~ 112 (561)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|..+.. .+.||.+.. ...|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4678999973 347999999999999999987 456789999976543 568997532 4569999999
Q ss_pred EEEEEecCceeeeeEecCch--hh-hccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH-----------h
Q 046746 113 TYYLQVKDQIGSYIYHPSTG--FH-RAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE-----------L 178 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-----------~ 178 (561)
+..+++++..|.||..+... .+ ...|..-+++..+......+... ..... ..+.+..+..-.. .
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~-~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTN-QTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCC-CCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCC-CCCCC-cccccccccccccccCCCcccCCCC
Confidence 99999755579999987643 11 11222223343332211111100 00000 0001110000000 0
Q ss_pred hhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCC------CCCCceEEEEcCCEEEEEEEEcC--CCceEEEEEe
Q 046746 179 GKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGK------GDNEPLFTMKAGKVYKYRICNVG--VKTSLNFRIQ 243 (561)
Q Consensus 179 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~------~~~~p~~~v~~G~~~rlRliN~~--~~~~~~~~i~ 243 (561)
...+..... .....+.|||+.+.. ... ++. ....+.+.++.|++++|.|.|.+ ....|.||+|
T Consensus 323 d~~~~l~~~-~~~~~w~iNg~s~~~-~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLH 400 (499)
T 3pxl_A 323 DKAINMAFN-FNGSNFFINGASFVP-PTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLH 400 (499)
T ss_dssp SEEEECCEE-ECSSCEEETTBCCCC-CSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEET
T ss_pred cEEEEEEEE-ecCcEEEEcCEecCC-CCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceec
Confidence 000000000 012368899988621 000 010 01235789999999999999422 3346799999
Q ss_pred CcccEEEeecCccc----ceeeeeeEEEcc---cceEEEEEEeCCCCCceEEEEEee
Q 046746 244 GHTMKLVEMEGSHV----VQNEYESLDVHV---GQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 244 gh~~~via~DG~~~----~p~~~~~v~l~p---geR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
||.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +||.|.++++..
T Consensus 401 Gh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 401 GHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 99999999887643 588899999976 99999999998 899999999854
No 61
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.40 E-value=6.2e-12 Score=135.85 Aligned_cols=242 Identities=11% Similarity=0.152 Sum_probs=150.4
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEEEEEEecC
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYTYYLQVKD 120 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~Y~f~~~~ 120 (561)
...+++||+. .|+|+|++|+++++||.|.. .....+|.+|..+.. .+.||.+.. ...|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4578999996 69999999999999999998 456788888875543 468997542 456999999999999754
Q ss_pred c-eeeeeEecCchhhhc------cCceeEEEEecCCCCCCCCCCCCCCceEEEecceeec----------chHHhhhhhc
Q 046746 121 Q-IGSYIYHPSTGFHRA------AGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTR----------SHVELGKQLD 183 (561)
Q Consensus 121 ~-~Gt~wYH~H~~~q~~------~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~----------~~~~~~~~~~ 183 (561)
+ .|.||..+....... ....+..+++-....+.+-.. ...++...+.|..+. .+..+.-.+.
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~-~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~ 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQN-YVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCC-CCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCC-cccccccccccccceeCCCCCCCCCCCeEEEEEEE
Confidence 3 578999876542210 012222333221111111000 000000000000000 0000000000
Q ss_pred CCCCCCCCCeEEEcCccCCCCC--------C-----CCCC--CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccE
Q 046746 184 SGKLLGKPDGVLINGKSGRLDY--------D-----SDGK--GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK 248 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~--------~-----~~~~--~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 248 (561)
..........++|||+.+...- . .... ......+.++.|++++|.|.|.+. ..|.||||||.|+
T Consensus 324 ~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~ 402 (534)
T 1zpu_A 324 MDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQ 402 (534)
T ss_dssp EEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCEE
T ss_pred eeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceE
Confidence 0000011236889999762100 0 0000 001356899999999999999875 5679999999999
Q ss_pred EEeecCc--------------------ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 249 LVEMEGS--------------------HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 249 via~DG~--------------------~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
|++.++. +..|...|++.+.||+.+.|.++++ +||.|.++++..
T Consensus 403 Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 403 TIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp EEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred EEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 9998753 1236789999999999999999998 899999999854
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.39 E-value=1.2e-11 Score=134.52 Aligned_cols=229 Identities=14% Similarity=0.153 Sum_probs=140.1
Q ss_pred eEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEEEEEEe-cCceeeeeEecCch
Q 046746 60 NINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYTYYLQV-KDQIGSYIYHPSTG 132 (561)
Q Consensus 60 ~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~Y~f~~-~~~~Gt~wYH~H~~ 132 (561)
+|+|++|+++++||.|... ....+|++|..+.. .+.||.+.. ...|.|||+++..+++ ++..|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 45789999876543 468997532 5569999999999997 34489999998864
Q ss_pred hhhccCceeEEEEe--cCCCCCCCCCCCCCCceEEEecceeecchHHhhhh-----------------hcCCC-CCCCCC
Q 046746 133 FHRAAGGFGGLCIH--SRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ-----------------LDSGK-LLGKPD 192 (561)
Q Consensus 133 ~q~~~Gl~G~liV~--~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~-----------------~~~~~-~~~~~~ 192 (561)
........+..|++ .......+... ....+ ...|........+... +.... ......
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~--~p~~p-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 360 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP--PPQTP-AWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYV 360 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC--CCCCC-CTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC--CCCCC-ccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCeE
Confidence 21111222322332 21110000000 00000 0000000000000000 00000 000112
Q ss_pred eEEEcCccCCC----------------------------CCCCCC-CCC-----CCceEEEEcCCEEEEEEEEcCCC---
Q 046746 193 GVLINGKSGRL----------------------------DYDSDG-KGD-----NEPLFTMKAGKVYKYRICNVGVK--- 235 (561)
Q Consensus 193 ~~liNG~~~~~----------------------------~~~~~~-~~~-----~~p~~~v~~G~~~rlRliN~~~~--- 235 (561)
.+.|||+.+.. +|+... ..| ....+.++.|++++|.|.|.+..
T Consensus 361 ~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~ 440 (552)
T 1aoz_A 361 KWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKEN 440 (552)
T ss_dssp EEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTT
T ss_pred EEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccc
Confidence 57888886421 010000 000 02458899999999999998753
Q ss_pred --ceEEEEEeCcccEEEee-cCcc----------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 236 --TSLNFRIQGHTMKLVEM-EGSH----------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 236 --~~~~~~i~gh~~~via~-DG~~----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
..|.||||||.|+|++. +|.+ ..|...|++.+.+|+.+.|.++++ +||.|.++++..
T Consensus 441 ~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~ 510 (552)
T 1aoz_A 441 LSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIE 510 (552)
T ss_dssp CCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSH
T ss_pred cCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeeh
Confidence 46899999999999998 4553 247789999999999999999998 899999999854
No 63
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.37 E-value=2.2e-12 Score=131.51 Aligned_cols=104 Identities=19% Similarity=0.310 Sum_probs=84.5
Q ss_pred EEECCcC--CCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------cc--CCccCCCCeEEEEEEe
Q 046746 50 ILINGQF--PGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------GT--NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~--q~~i~PG~~~~Y~f~~ 118 (561)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||...... .+|.. .. ...|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864322 23321 11 3569999999999996
Q ss_pred --cCceeeeeEecCchhhhccCceeEEEEecCCCCCCCC
Q 046746 119 --KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPY 155 (561)
Q Consensus 119 --~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 155 (561)
++++|+|+||||...+...||.|.++|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 3679999999999999999999999999876543333
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.36 E-value=2.3e-11 Score=132.22 Aligned_cols=245 Identities=11% Similarity=0.110 Sum_probs=148.6
Q ss_pred eeEEEECCcCC--------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeE
Q 046746 47 QQGILINGQFP--------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~ 112 (561)
...+++||+.. -|+|.|++|+++++||.|... ....+|++|..+.. .+.||.+.. ...|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999973 379999999999999999984 46789999976543 468998631 5569999999
Q ss_pred EEEEEecCceeeeeEecCc--hhhh--ccCce-eEEEEecCCCCCCCCCC-C--CC----CceEE-Eecceeecc-----
Q 046746 113 TYYLQVKDQIGSYIYHPST--GFHR--AAGGF-GGLCIHSRSVVPVPYNR-F--VE----DDFTL-LIGDWYTRS----- 174 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~--~~q~--~~Gl~-G~liV~~~~~~~~~~~~-~--~~----~e~~l-~~~d~~~~~----- 174 (561)
+..+++++..|.||..+.. .... ..... .+++.........|... . .+ .+..+ -+.......
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999975557999998765 2110 11111 22222221111111100 0 00 00000 000000000
Q ss_pred hHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCCC---CCCceEEEEcCCEEEEEEEEcCC----CceEEE
Q 046746 175 HVELGKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGKG---DNEPLFTMKAGKVYKYRICNVGV----KTSLNF 240 (561)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~~---~~~p~~~v~~G~~~rlRliN~~~----~~~~~~ 240 (561)
.....-.+...........+.|||+.+...... .+.. .....+.++.++.+++.++|... ...|.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000000000011234789999986211110 0000 01135778777777777777644 567899
Q ss_pred EEeCcccEEEeecC---------cc------------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 241 RIQGHTMKLVEMEG---------SH------------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 241 ~i~gh~~~via~DG---------~~------------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
|||||.|+|++.++ .. ..|...|++.+.+|+++.|.++++ .||.|.++++..
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 99999999999986 22 146789999999999999999988 899999999864
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.34 E-value=2.8e-11 Score=128.00 Aligned_cols=229 Identities=11% Similarity=0.103 Sum_probs=150.9
Q ss_pred EEEEEEEEEEEecC-------------CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeee--CC---cc
Q 046746 29 FFFTWNVTYGTISP-------------LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTW--PG---IQ 89 (561)
Q Consensus 29 ~~~~l~~~~~~~~~-------------dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~--HG---~~ 89 (561)
+++.|.+++..... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56677776654332 12334689999996 699999999 99999999984 5678999 77 44
Q ss_pred CCCCCCCCCCCcc------CCccCCCCeEEEEEEecCceeeeeEecCchhhhccC-------------ceeEEE--EecC
Q 046746 90 HKKNSWQDGVLGT------NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG-------------GFGGLC--IHSR 148 (561)
Q Consensus 90 ~~~~~~~DGv~~~------q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G-------------l~G~li--V~~~ 148 (561)
+.. .+.||.+.. ...|.|||+++..++.+ .|.||..++.......+ -...++ +...
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 332 468997431 45699999999999974 47899887643211000 111222 2121
Q ss_pred CCCCCCCCC--C------CCCceEEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEE-E
Q 046746 149 SVVPVPYNR--F------VEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFT-M 219 (561)
Q Consensus 149 ~~~~~~~~~--~------~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~-v 219 (561)
...+.+... . ...+..+.+ ..+ ...++|||+.+. .+.+.+. +
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l---------------~~~-----~~~~~iNg~~~~---------~~~p~~~~~ 343 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFAL---------------SLS-----GMQWTINGMFWN---------ASNPLFEHV 343 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEE---------------EEE-----TTEEEETTBCCC---------TTCTTCCCE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEE---------------eCC-----CceeeECCCcCC---------CCCCceecc
Confidence 111000000 0 000111111 000 125899999872 1235677 9
Q ss_pred EcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc------------ce---eeeeeEEEcccceEEEEEEeC---C
Q 046746 220 KAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV------------VQ---NEYESLDVHVGQCFTVLVTAN---Q 281 (561)
Q Consensus 220 ~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~------------~p---~~~~~v~l~pgeR~dv~v~~~---~ 281 (561)
+.|++++|+|.|.+....|.||||||.|+|++.+|... .| ...|++.+.||+++.|++++. .
T Consensus 344 ~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~a 423 (448)
T 3aw5_A 344 SVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKR 423 (448)
T ss_dssp EECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGT
T ss_pred CCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCC
Confidence 99999999999998446789999999999999999764 23 578999999999999997775 2
Q ss_pred -CCCceEEEEEee
Q 046746 282 -DPKDYYLIASTR 293 (561)
Q Consensus 282 -~~g~y~i~~~~~ 293 (561)
.| |.++++..
T Consensus 424 dnp--w~~HCHil 434 (448)
T 3aw5_A 424 GQL--FPFHCHNL 434 (448)
T ss_dssp TCE--EEEEESSH
T ss_pred CCc--EEEEcCCh
Confidence 45 88888754
No 66
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.34 E-value=1.9e-11 Score=129.65 Aligned_cols=250 Identities=16% Similarity=0.161 Sum_probs=155.8
Q ss_pred EEEEEEEEEEEecCCC--------------eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeee-CCccCCC
Q 046746 29 FFFTWNVTYGTISPLG--------------IPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTW-PGIQHKK 92 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~-HG~~~~~ 92 (561)
.++.|.+++.....+| .....+++||+. .|.+.+ +|+++++||.|.. .....+++ +|..+..
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4667777766554443 233579999996 588876 6789999999997 45678888 6764332
Q ss_pred CCCCCCCCc----c--CCccCCCCeEEEEEEecCceeeeeEecCchhhhc------cCceeEEEEecC---CCCCCCC--
Q 046746 93 NSWQDGVLG----T--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRA------AGGFGGLCIHSR---SVVPVPY-- 155 (561)
Q Consensus 93 ~~~~DGv~~----~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~~---~~~~~~~-- 155 (561)
.+.||.+. . ...|.|||+++..++++ +.+.|+.-+....... +.-.-.+-|.+. .....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 56899642 1 56699999999999974 5677776544221100 000002223221 1111110
Q ss_pred ---CCCC------CCceEEEecceeecc-----------hHHhhhh----hc----CCCC--------CCCCCeEEEcCc
Q 046746 156 ---NRFV------EDDFTLLIGDWYTRS-----------HVELGKQ----LD----SGKL--------LGKPDGVLINGK 199 (561)
Q Consensus 156 ---~~~~------~~e~~l~~~d~~~~~-----------~~~~~~~----~~----~~~~--------~~~~~~~liNG~ 199 (561)
+... .+++.+.+... .+. ...+... +. .|.. ......++|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 0000 12233332210 000 0000000 00 0100 000124799999
Q ss_pred cCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccce---eeeeeEEEcccceEEEE
Q 046746 200 SGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ---NEYESLDVHVGQCFTVL 276 (561)
Q Consensus 200 ~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p---~~~~~v~l~pgeR~dv~ 276 (561)
.+. .+.+.++++.|++++|+|+|.+....|.||||||.|+|++.||....+ ...|+|.|. |+++.|+
T Consensus 386 ~~~---------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 386 AFD---------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp CCC---------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEE
T ss_pred eCC---------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEE
Confidence 871 134779999999999999999976778999999999999999987643 478999999 9999999
Q ss_pred EEeCC---CCCceEEEEEee
Q 046746 277 VTANQ---DPKDYYLIASTR 293 (561)
Q Consensus 277 v~~~~---~~g~y~i~~~~~ 293 (561)
++++. .+|.|.++++..
T Consensus 456 ~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 456 VKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp ECBCSCCCGGGCEEEEESSH
T ss_pred EEeccCCCCCCCEEEeCCch
Confidence 99974 357899999754
No 67
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.28 E-value=1.6e-10 Score=125.81 Aligned_cols=233 Identities=10% Similarity=0.079 Sum_probs=145.3
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCc-------cCCCCCCCCCCCcc-----C-------Ccc
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGI-------QHKKNSWQDGVLGT-----N-------CPI 106 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~-------~~~~~~~~DGv~~~-----q-------~~i 106 (561)
...+++||+. .|.|.|++| ++++||.|.. .....+++.|. .+. -...||.+.. + ..|
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEE
Confidence 4578999995 799999999 9999999997 46678888664 111 2458997531 2 458
Q ss_pred CCCCeEEEEEEecCceee-eeEecCchhhh------ccCc-ee---EEEEecCC-CC--CCCCC------CCC----CCc
Q 046746 107 PPGKNYTYYLQVKDQIGS-YIYHPSTGFHR------AAGG-FG---GLCIHSRS-VV--PVPYN------RFV----EDD 162 (561)
Q Consensus 107 ~PG~~~~Y~f~~~~~~Gt-~wYH~H~~~q~------~~Gl-~G---~liV~~~~-~~--~~~~~------~~~----~~e 162 (561)
.|||+++.-++..+.+|+ ++...-..... .+|. .+ -+.|..+. .+ .+|.. ... ...
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 999999999997554664 66654421110 0011 11 13444332 11 11110 000 000
Q ss_pred eEEEec------------ceeecc---hHHhh----hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCC
Q 046746 163 FTLLIG------------DWYTRS---HVELG----KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGK 223 (561)
Q Consensus 163 ~~l~~~------------d~~~~~---~~~~~----~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~ 223 (561)
..+++. -|.... .+.+. ..............++|||+.+ .+.+.++++.|+
T Consensus 411 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~----------~~~~~~~v~~G~ 480 (612)
T 2g23_A 411 RLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF----------NDGLGFTIGEGT 480 (612)
T ss_dssp EEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST----------TSCCCEEEETTC
T ss_pred eEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC----------CCCCceEecCCC
Confidence 122221 011110 00000 0000000001123688999987 235889999999
Q ss_pred EEEEEEEEcCCCceEEEEEeCcccEEEeecCc------------------------cc---ceeeeeeEEEcccceEEEE
Q 046746 224 VYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS------------------------HV---VQNEYESLDVHVGQCFTVL 276 (561)
Q Consensus 224 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~~~v~l~pgeR~dv~ 276 (561)
+++|+|+|.+. ..|.||||||.|+|++.+|. .+ ++...|++.+.||+++.|.
T Consensus 481 ~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~ 559 (612)
T 2g23_A 481 HEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEE
Confidence 99999999985 56799999999999987532 11 2236899999999999999
Q ss_pred EEeCCCCCceEEEEEee
Q 046746 277 VTANQDPKDYYLIASTR 293 (561)
Q Consensus 277 v~~~~~~g~y~i~~~~~ 293 (561)
++++..+|.|.++|+..
T Consensus 560 ~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 560 GKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EECCSCCEEEEEEESSH
T ss_pred EEeCCCCccEEEEeCch
Confidence 99987899999999854
No 68
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=1e-11 Score=133.23 Aligned_cols=96 Identities=15% Similarity=0.056 Sum_probs=74.7
Q ss_pred CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCce
Q 046746 43 LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQI 122 (561)
Q Consensus 43 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~ 122 (561)
++....+|++|++|++|+|++++||+|+++++|.+...-. +||+.... .|+ ++.+.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4577889999999999999999999999999998653111 35654422 222 3679999999999995 789
Q ss_pred eeeeEecCch-hhhccCceeEEEEecC
Q 046746 123 GSYIYHPSTG-FHRAAGGFGGLCIHSR 148 (561)
Q Consensus 123 Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (561)
|+||||||.. .....||+|.|+|+++
T Consensus 567 GtY~yhC~e~Cg~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHMEMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEEECCCCCCCCccCCEEEEEEEcC
Confidence 9999999931 1112399999999985
No 69
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.23 E-value=5.9e-11 Score=127.80 Aligned_cols=227 Identities=14% Similarity=0.125 Sum_probs=139.8
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCc-cCCCCCCCCCCCc----c--CCccCCCCeEEEEEEe
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGI-QHKKNSWQDGVLG----T--NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~-~~~~~~~~DGv~~----~--q~~i~PG~~~~Y~f~~ 118 (561)
...+++||+. .|.|.|+.| ++++||.|... ....+|+.|. .+. -.+.||.+. . ...|.|||+++..++.
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4678999996 799999885 99999999984 4578999886 333 256899543 1 4569999999999997
Q ss_pred cCceeeeeE-ecCch--hhhccCceeE-EEEecCC--CC----CCCCCCCCCCceEEEecceeecchHHhhhhhcCCCCC
Q 046746 119 KDQIGSYIY-HPSTG--FHRAAGGFGG-LCIHSRS--VV----PVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLL 188 (561)
Q Consensus 119 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~-liV~~~~--~~----~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~ 188 (561)
++.+|.++. .+-.. .....+.... +-++... .. ..|... ...+. +-..+-.......+...++.
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l-~~~~~-~~~~~~~~~~~~~l~~~~~~---- 380 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYL-ASYPS-VQHERIQNIRTLKLAGTQDE---- 380 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBC-SCCGG-GCCCCEEEEEEEEEEEEECT----
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccc-cCCCC-cccCCCcceEEEEEEeecCC----
Confidence 554676332 21110 0000011122 2222111 00 011000 00000 00000000000000000000
Q ss_pred CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCc-------------
Q 046746 189 GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS------------- 255 (561)
Q Consensus 189 ~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------- 255 (561)
.....++|||+.+. +...+.++.|++++|+|.|.+. ..|.||||||.|+|++.+|.
T Consensus 381 ~g~~~~~iNg~~~~----------~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~ 449 (513)
T 2wsd_A 381 YGRPVLLLNNKRWH----------DPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSY 449 (513)
T ss_dssp TSCEEEEETTBCTT----------SCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCB
T ss_pred CCCceEeECCccCC----------CcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccccccccccc
Confidence 01125789999871 2245789999999999999886 46799999999999998752
Q ss_pred --c------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 256 --H------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 256 --~------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+ -++...|++.|.||+.+.|++++++.+|.|.++++..
T Consensus 450 ~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 450 TGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp SSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 1 0234789999999999999999965899999999854
No 70
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.23 E-value=4.6e-11 Score=100.15 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=62.4
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
+..|..+.|++++||+|+ +.|..+..+++|+++. +||.... +..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445667999999999965 4699888899998862 2555433 45689999999988 379999999998
Q ss_pred hhhhccCceeEEEEe
Q 046746 132 GFHRAAGGFGGLCIH 146 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (561)
|. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 65 899999985
No 71
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.21 E-value=1.8e-10 Score=124.21 Aligned_cols=230 Identities=16% Similarity=0.088 Sum_probs=140.4
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCC-------ccCCCCCCCCCCCc----c--CCccCCCCeE
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPG-------IQHKKNSWQDGVLG----T--NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG-------~~~~~~~~~DGv~~----~--q~~i~PG~~~ 112 (561)
...+++||+. .|.|.|+.| ++++||.|.. .....++++| ..+. -.+.||.+. . ...|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 4579999995 799999985 9999999998 4567889876 2222 245898632 1 5669999999
Q ss_pred EEEEEecCcee-eeeEecCchhhhcc-------CceeEEEEecCCCCCCCCCCCCCCceEEEeccee-ecchHHhhhhhc
Q 046746 113 TYYLQVKDQIG-SYIYHPSTGFHRAA-------GGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWY-TRSHVELGKQLD 183 (561)
Q Consensus 113 ~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~-~~~~~~~~~~~~ 183 (561)
+..++.++.+| +||..+........ ...+.+-+........+. ....+..+.... ..........+.
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~----~~~~P~~L~~~~~p~~~~~~~~~~~ 353 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD----TSVVPANLRDVPFPSPTTNTPRQFR 353 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC----CCCCCCCCCCCSCCCCCCCCCEEEE
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC----CCCCccccccCCCCCCccccceEEE
Confidence 99999755467 68876532100000 011222222111100000 000000000000 000000000000
Q ss_pred CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEee-cCc---cc--
Q 046746 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM-EGS---HV-- 257 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~---~~-- 257 (561)
.+ .....++|||+.+.. . .....+.++.|++++|.|.|.+....|.||||||.|+|++. +|. ..
T Consensus 354 ~~---~~~~~w~iNG~~f~~-~------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~ 423 (534)
T 3abg_A 354 FG---RTGPTWTINGVAFAD-V------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMP 423 (534)
T ss_dssp CS---CCCSTTCCCCBTTBC-T------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCS
T ss_pred Ee---ccCceeEECCcccCC-C------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCc
Confidence 00 011257899998610 0 01134689999999999999986667899999999999998 663 11
Q ss_pred -ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 258 -VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 258 -~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+....|++.+.||+++.|.+.+.+.+|.|.++++..
T Consensus 424 ~~~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil 460 (534)
T 3abg_A 424 YESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNL 460 (534)
T ss_dssp GGGSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCH
T ss_pred cccCCcCeEEcCCCCEEEEEEEECCCCccEEEecChH
Confidence 125689999999999999998434899999999864
No 72
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.15 E-value=4.4e-11 Score=105.73 Aligned_cols=94 Identities=14% Similarity=0.086 Sum_probs=72.5
Q ss_pred EEecCCCcEEEEEEEcCCCC-CCceeecCCceEEEe------ecCC---CCCcCCCCCCCCCCCCceeEEEeCCCcEEEE
Q 046746 427 VMDATYKAFMEIVLENRQNT-MQSWILDGYAFFAVG------MEPG---TWNPDKRKSYNLIDAVSRYTIQVFPNCWAAI 496 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~-~HP~HlHG~~F~Vl~------~~~g---~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~i 496 (561)
.+.++.|++|+|+|.|.+.. .|.||+|+....+.. ...+ .+.+.. ....++||..|.||+...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 899999986532110 0000 111100 1235789999999999999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|.+++||.|.||||+..|.. ||+..+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999873
No 73
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.13 E-value=1.3e-10 Score=97.38 Aligned_cols=84 Identities=13% Similarity=0.032 Sum_probs=66.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-CCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-DNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-dnpG~ 505 (561)
.+.++.|++|+| .|.+...|+||+||..+... .|. + .+....++..+.||+...++|.+ +.||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~-~---------~~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKE-L---------ADKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHH-H---------HHHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccc-c---------cccccccccccCCCCeEEEEEecCCCCee
Confidence 467899999876 68888899999999877431 010 0 00112588999999999999998 79999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||| .|...||+..+.|.
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CchhcCCEEEEEEc
Confidence 999999 69999999999885
No 74
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.11 E-value=3.5e-09 Score=114.60 Aligned_cols=241 Identities=14% Similarity=0.110 Sum_probs=147.1
Q ss_pred eeEEEECCcCC----------------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CC
Q 046746 47 QQGILINGQFP----------------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NC 104 (561)
Q Consensus 47 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~ 104 (561)
...+++||+-. .++|.|++|+++++||.|... ....+|.+|..+.. .+.||.+.. ..
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999742 379999999999999999984 45689999976543 568998642 45
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchhh----hccCceeEEEEecCCCCCCCCCC-CCCCceEEEecc--eeecch--
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGFH----RAAGGFGGLCIHSRSVVPVPYNR-FVEDDFTLLIGD--WYTRSH-- 175 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q----~~~Gl~G~liV~~~~~~~~~~~~-~~~~e~~l~~~d--~~~~~~-- 175 (561)
.|.|||+++..+++++..|.||..+..... ...+..-+++..+......|... ....+. .+.+ ..+...
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 699999999999976668999999875321 11111223333332111111100 000000 0000 000000
Q ss_pred HHh------hhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCCCC---CCceEEE----EcCCEEEEEEEEcCC-
Q 046746 176 VEL------GKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGKGD---NEPLFTM----KAGKVYKYRICNVGV- 234 (561)
Q Consensus 176 ~~~------~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~~~---~~p~~~v----~~G~~~rlRliN~~~- 234 (561)
..+ ...+..+ ......+.|||..+...+.. +|... ....+.+ +.|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 000 0000000 01123578999876211111 11110 0123444 359999999999872
Q ss_pred CceEEEEEeCcccEEEeecCc------------ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 235 KTSLNFRIQGHTMKLVEMEGS------------HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 235 ~~~~~~~i~gh~~~via~DG~------------~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
...|.||+|||.|+|++.+.+ +..|...|++.+.||+.+.+.++++ +||.|.++++..
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 257899999999999998432 2347889999999999999999998 899999999854
No 75
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.05 E-value=4.3e-10 Score=94.32 Aligned_cols=83 Identities=14% Similarity=0.243 Sum_probs=62.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCC-----CccCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGV-----LGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv-----~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
.+.|++++||+|++ .|.....+++|.|+.... ..+|. ......+.||++++|.|+.++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47999999999755 588767788888875332 12332 0012458999999999974368999999999
Q ss_pred hhhccCceeEEEEec
Q 046746 133 FHRAAGGFGGLCIHS 147 (561)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (561)
.+...||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 567789999999963
No 76
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.97 E-value=2.8e-09 Score=107.35 Aligned_cols=100 Identities=16% Similarity=0.251 Sum_probs=80.2
Q ss_pred EEECCcC--CCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc--------CCccCCCCeEEEEEEe-
Q 046746 50 ILINGQF--PGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT--------NCPIPPGKNYTYYLQV- 118 (561)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~--------q~~i~PG~~~~Y~f~~- 118 (561)
|++||.. ..|.|.++.||+|++++.|.-.....+|+||..... ...||..+. ...|.||+++++.+..
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v-~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWAD-NRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES-STTSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEE-EEECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 5667753 368899999999999999998888999999976532 234443221 3458999999999974
Q ss_pred -cCceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 119 -KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 119 -~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
++.+|+|.||||...+...||.|.+.|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 23589999999999999999999999998764
No 77
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.93 E-value=4e-08 Score=108.32 Aligned_cols=91 Identities=9% Similarity=0.039 Sum_probs=74.2
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc--------------
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV-------------- 257 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-------------- 257 (561)
..+.+||+.+ .+...+.++.|++++|.|+|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~----------~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~ 527 (612)
T 3gyr_A 459 KTYRRTARTF----------NDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp EEEEEEECST----------TSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCE
T ss_pred ccccccCccC----------CCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCcccccccccccccc
Confidence 4577888876 134678999999999999999874 569999999999998766421
Q ss_pred -------------ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 258 -------------VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 258 -------------~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
++...|+|.+.+|+.+.|.+++.+.+|.|.++|+..
T Consensus 528 ~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122479999999999999999766899999999865
No 78
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.92 E-value=5.3e-09 Score=92.23 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=66.3
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCC-CeeeeeCCccCC------------C---CCCCCCCCc-c--CCccCCCCeEEEE
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDE-PFLLTWPGIQHK------------K---NSWQDGVLG-T--NCPIPPGKNYTYY 115 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~-~~~iH~HG~~~~------------~---~~~~DGv~~-~--q~~i~PG~~~~Y~ 115 (561)
.|--+.|+|++||+|+++++|.-.. .++++.|+.... + ...-++.+. . ...|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4545789999999999999998766 788888764210 0 000001010 0 2348999999999
Q ss_pred EEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 116 LQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
|++ +++|+|+||||...+.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 995 57999999999888888 999999984
No 79
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.91 E-value=4.1e-09 Score=105.26 Aligned_cols=100 Identities=13% Similarity=0.172 Sum_probs=77.9
Q ss_pred EEECCcCC--CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc-------c-CCccCCCCeEEEEEEe-
Q 046746 50 ILINGQFP--GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG-------T-NCPIPPGKNYTYYLQV- 118 (561)
Q Consensus 50 ~~~Ng~~p--gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-------~-q~~i~PG~~~~Y~f~~- 118 (561)
|.+||+.- -|.|.++.||+|+++|.|.......+|+||...... ..++... . ...|.||+++++.+..
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 45577643 588999999999999999998889999999765321 1222211 1 2348999999999874
Q ss_pred -cCceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 119 -KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 119 -~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
++.+|+|+||||...+...||.|.+.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 24589999999999999999999999998754
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.87 E-value=2e-08 Score=88.53 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=66.1
Q ss_pred cCCCCeEEecCCCEEEEEEEe--CCCCCeeeeeCCcc------------CC----CCCCCCCCCcc--CCccCCCCeEEE
Q 046746 55 QFPGPNINSTTNDNLVINVFN--KLDEPFLLTWPGIQ------------HK----KNSWQDGVLGT--NCPIPPGKNYTY 114 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N--~l~~~~~iH~HG~~------------~~----~~~~~DGv~~~--q~~i~PG~~~~Y 114 (561)
+|-.+.|+|++||+|+++++| .....++++.+... .. .-+..|..... ...|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344579999999999999999 66667777776310 00 00000111000 245899999999
Q ss_pred EEEecCceeeeeEecCchhhhccCceeEEEEec
Q 046746 115 YLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 115 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
.|++ +++|+|||||+...+...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9996 6799999999998888899999999974
No 81
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.85 E-value=7.1e-09 Score=90.38 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=56.8
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
+..|-.+.|++++||+|++ .|....++++++... .+|.... ...+.||++++|.|. ++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF~---~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITFN---EAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEcC---CCEEEEEEeCC
Confidence 4455557999999999765 588766677766432 1122112 345889999999983 69999999987
Q ss_pred hhhhccCceeEEEEe
Q 046746 132 GFHRAAGGFGGLCIH 146 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (561)
|. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 54 999999985
No 82
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.83 E-value=6.4e-09 Score=87.05 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=63.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-CCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-DNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-dnpG~ 505 (561)
.+.++.|++|.|+ |.+...|.||+|+..+.. ..|. + . ....+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~-~---~------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSAD-L---A------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHH-H---H------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---cccc-c---c------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4678999998884 877788999999865421 0010 0 0 0011467788899999999988 89999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||| .|.+.||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 79999999999885
No 83
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.81 E-value=1.3e-08 Score=84.15 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=63.0
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
|..|-...|++++||+|++.++|.....+++...+... ...+.||++.+|.|+ ++++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t-~~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVK-PKSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEC-CCSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEe-cccCceEEEECcc-
Confidence 34454568999999999999999976666666655422 135789999999999 5789999999975
Q ss_pred hhhccCceeEEEEe
Q 046746 133 FHRAAGGFGGLCIH 146 (561)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (561)
+...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 4557899999996
No 84
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.76 E-value=9.9e-09 Score=84.58 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=58.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCC--CCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG--VLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG--v~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
.+.|++++||+|+ ++|.....+++|+|+..... ..|. .+.....+.||++++++|+ ++|+|+|||+ .+.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 4789999999865 58887778999999853211 1110 0000235789999999885 6999999999 456
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 67999999984
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=1.2e-08 Score=84.17 Aligned_cols=81 Identities=15% Similarity=0.221 Sum_probs=57.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+|++ .|.-...+++|.++....+ ...++.......+.||+++++.| +++|+|+|||+ .+...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 46899999999765 5876677888888753210 00000000024589999999988 36999999999 45668
Q ss_pred CceeEEEEe
Q 046746 138 GGFGGLCIH 146 (561)
Q Consensus 138 Gl~G~liV~ 146 (561)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 86
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.67 E-value=4e-08 Score=86.63 Aligned_cols=96 Identities=10% Similarity=0.098 Sum_probs=70.8
Q ss_pred EEecCCCcEEEEEEEc--CCCCCCceeecCC--ceEEEee-c--CC---CCCcCCCCCCCCCCCCceeEEEeCCCcEEEE
Q 046746 427 VMDATYKAFMEIVLEN--RQNTMQSWILDGY--AFFAVGM-E--PG---TWNPDKRKSYNLIDAVSRYTIQVFPNCWAAI 496 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N--~~~~~HP~HlHG~--~F~Vl~~-~--~g---~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~i 496 (561)
.+.++.|++|.|++.| .+...|.||++.. .+.-+.. + .+ .+-+.. + ....+++|..|.+|....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP----D-TPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT----T-CTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc----c-cccccccceeeCCCceeEE
Confidence 3678999999999999 6678999999853 2211000 0 00 010000 0 0124689999999999999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.64 E-value=8.8e-08 Score=77.57 Aligned_cols=76 Identities=21% Similarity=0.381 Sum_probs=56.0
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
|-.+.|++++||+|++ .|.....++++.++.. +.. .....+.||+++++.| +++|+|||||+. +.
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~--H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCEP--HR 80 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECTT--TG
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeCC--Cc
Confidence 3357899999999765 5876677888888721 000 0124588999998887 469999999994 44
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 56999999984
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.62 E-value=1e-07 Score=78.46 Aligned_cols=79 Identities=9% Similarity=0.005 Sum_probs=60.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+ |.+...|.+|+|+..+- +.... ....|+..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~~~--------------~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADTAA--------------KLSHKGLLFAAGESFTSTF--TEPGTY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHHHH--------------HHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccccc--------------cccccccccCCCCEEEEEc--CCCeEE
Confidence 4678999998885 77778899999875431 00000 0115788999999988876 899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||| .|...||+..+.|.
T Consensus 80 ~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 80 TYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEECG--GGTTTTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 69999999999873
No 89
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.60 E-value=1.1e-07 Score=78.14 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=61.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|+| .|.+...|.+|+|+..+. .+ ++. ...++|+..+.||+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~-~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG-VNA---------DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT-CCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc-ccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 477899999887 788778999999874320 00 110 01246899999999988866 589999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||| .|.+.||+..+.|.
T Consensus 80 ~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECG--GGGGGTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 69999999999873
No 90
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.58 E-value=1.4e-07 Score=77.43 Aligned_cols=77 Identities=19% Similarity=0.339 Sum_probs=55.3
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc---cCCccCCCCeEEEEEEecCceeeeeEecCchhh
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG---TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH 134 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 134 (561)
.+.|++++||+| ++.|.-...++++.++... .+|... ....+.||+++++.| +++|+|+|||+ .+
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Ch
Confidence 468999999995 5568765667777776422 112100 124588999999988 47999999999 45
Q ss_pred hccCceeEEEEe
Q 046746 135 RAAGGFGGLCIH 146 (561)
Q Consensus 135 ~~~Gl~G~liV~ 146 (561)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 567999999984
No 91
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.58 E-value=1.5e-07 Score=80.60 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=53.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|+|++||+|++.+.|. ++++..+.- ..-+|.- ...+.||++++|+|+ ++|+|||+|. .+...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcC
Confidence 3689999999988777762 333333211 1123321 133579999999994 6999999998 45668
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.+.
T Consensus 85 GM~G~I~V~~~ 95 (123)
T 3erx_A 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 99999999873
No 92
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.57 E-value=1.4e-07 Score=78.28 Aligned_cols=79 Identities=9% Similarity=0.054 Sum_probs=55.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCC--------CCCCCccCCccCCCCeEEEEEEecCceeeeeEec
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSW--------QDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHP 129 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~--------~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 129 (561)
.+.|++++||+|+ +.|.-...++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 4789999999976 5587666677776631 0000 001000123589999999988 4699999999
Q ss_pred CchhhhccCceeEEEEe
Q 046746 130 STGFHRAAGGFGGLCIH 146 (561)
Q Consensus 130 H~~~q~~~Gl~G~liV~ 146 (561)
+ .+...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 56778999999985
No 93
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.53 E-value=2.2e-07 Score=75.21 Aligned_cols=72 Identities=10% Similarity=0.104 Sum_probs=58.0
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.| .|.+...|.+|+|+.. +...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQW--VNNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEEE
Confidence 467899999887 4777788999998721 0124788899999888876 899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||| .|...||...+.|.
T Consensus 73 ~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEEeC--CCccCCCEEEEEEC
Confidence 99999 69999999998873
No 94
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.52 E-value=1.5e-07 Score=80.96 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=52.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|+|++||+|++.+.|. ++++..+.- ..-||.- ..-+.||++++|.|+ ++|+|||||.. +...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~~--~f~s~pGet~s~TF~---~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGAE--TWKGKINEEITVTLS---KPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTCC--CCBCCTTCCCEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--CCcC
Confidence 4799999999977666553 333332211 1112221 134579999998884 69999999985 4568
Q ss_pred CceeEEEEecCC
Q 046746 138 GGFGGLCIHSRS 149 (561)
Q Consensus 138 Gl~G~liV~~~~ 149 (561)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999853
No 95
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.50 E-value=4.6e-07 Score=74.59 Aligned_cols=77 Identities=18% Similarity=0.293 Sum_probs=56.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------ccCCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------GTNCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
.+.|++++||+| +++|.-...+++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 468999999985 5578877778888886422 12221 00135789999999885 6999999999
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 45667999999984
No 96
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.49 E-value=3.9e-07 Score=75.02 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=56.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------ccCCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------GTNCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
.+.|++++||+|+ ++|.-...++++.++... -+|.- .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 4689999999865 578876677777776322 12210 00135789999999885 6999999999
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 45667999999984
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.44 E-value=8.1e-07 Score=75.89 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=52.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|+|++||+|++. |.- .++++..+... .-+|.. ...+.||++++|+|+ .+|+|||||- .+...
T Consensus 21 P~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~-----~p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD-KSHNAESVREV-----WPEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS-SSCCCEECTTT-----SCTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEE--ECC-CCccEEEeCCc-----CCCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcC
Confidence 368999999996554 543 45555544211 112321 134679999999994 6999999997 45667
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.43 E-value=2.6e-07 Score=75.80 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=58.9
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+ |.+...|.+++++..+. .+. . ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~~------~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ESA------P------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SCH------H------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----ccc------c------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998774 77778899999876551 000 0 0114667788888888876 899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||+ .|.+.||...+.|.
T Consensus 79 ~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEECS--STTTTTCEEEEEEC
T ss_pred EEEcc--ChhhcCCEEEEEEC
Confidence 99999 69999999998873
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.42 E-value=7.6e-07 Score=75.11 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=58.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+|.+.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999866555544321 125678999999999999999999
Q ss_pred eeecccchhhhccceEEEEEec
Q 046746 507 NLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~ 528 (561)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766544 888888753
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.34 E-value=1.2e-06 Score=72.02 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=60.3
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|.+|+++..|. .+ .+... . ...+|++.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~~---~----~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVTK---I----SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccccc---c----cccccceeeCCCCEEEEEe--CCCcE
Confidence 3567899999877 788878999999986541 01 11000 0 0124667788999888866 58999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||+ .|.+.||...+.|.
T Consensus 80 y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCEEEEEEC
Confidence 999999 69999999999873
No 101
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.32 E-value=7.2e-07 Score=80.16 Aligned_cols=92 Identities=14% Similarity=0.059 Sum_probs=60.5
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCC-------CeeeeeCCccC------CCCCCCC----CCCc-c--CCccCCCCeEE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDE-------PFLLTWPGIQH------KKNSWQD----GVLG-T--NCPIPPGKNYT 113 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~-------~~~iH~HG~~~------~~~~~~D----Gv~~-~--q~~i~PG~~~~ 113 (561)
+|--..|.| +.||+|+|+|+|.... +..|--+|... .....++ +-+. . ...|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 9999999999998643 22332233100 0000001 0011 1 23589999999
Q ss_pred EEEEec-CceeeeeEecCchhhhccCceeEEEEec
Q 046746 114 YYLQVK-DQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 114 Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+.|+++ -++|+|||+|-...+.. ||.|.|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999864 26999999998766666 8999999974
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.31 E-value=1.1e-06 Score=72.15 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=54.8
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc--c---CCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG--T---NCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~---q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
|-.+.|++++||+|++ .|.-...+++....-. .-+|.-. . ...+.||+++++.| +++|+|+|+|.
T Consensus 15 F~P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 3357899999999654 5876667777665421 1122210 0 12478999999988 36999999998
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
. +...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 6 4456999999984
No 103
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.25 E-value=2.8e-06 Score=72.70 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=50.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+|++ .|.-. ++++..+- ...-||... ....||++++|.|+ ++|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~~--~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAEK--FKSKINENYVLTVT---QPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCCC--CBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCccc--eecCCCCEEEEEeC---CCEEEEEEeCC--cccC
Confidence 47899999999765 45432 33333321 111122211 23468999888884 69999999974 5557
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999873
No 104
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.25 E-value=2.2e-06 Score=73.96 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=61.0
Q ss_pred cCCCCeEEecCC-CEEEEEEEeCCCC-------CeeeeeCCccC-------CCCCCCC----CCCcc---CCccCCCCeE
Q 046746 55 QFPGPNINSTTN-DNLVINVFNKLDE-------PFLLTWPGIQH-------KKNSWQD----GVLGT---NCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v~~G-d~v~v~v~N~l~~-------~~~iH~HG~~~-------~~~~~~D----Gv~~~---q~~i~PG~~~ 112 (561)
+|--..|.|++| |+|+|+|+|.-.. +..|--+|..+ .....++ +-+.+ ...|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 444458999999 9999999998643 33333333110 0000011 01111 2358999999
Q ss_pred EEEEEec--CceeeeeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
++.|+++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999964 37999999998776666 8999999964
No 105
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.21 E-value=4e-06 Score=69.08 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=59.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.|++.|.+...|.|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 4678999999999999988778776644322 2356788999999999999999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|+|. .|...||...+.|+
T Consensus 82 ~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEECc--cccCCCCEEEEEEC
Confidence 99997 49999999988874
No 106
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.20 E-value=3.1e-06 Score=72.40 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=50.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+|+ +.|.-. ++++..+. ...-||.. ...+.||++++|.|+ ++|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--cccc
Confidence 4689999999965 455532 33333321 11122221 123579999888884 69999999985 5557
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 107
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.20 E-value=9.4e-06 Score=67.59 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=52.7
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCchh
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF 133 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 133 (561)
.|--..|++++||+|++ .|.-...+++...... .|.... ...+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 44457999999999765 5876555555544321 111111 23578999999988 36999999998754
Q ss_pred hhccCceeEEEEe
Q 046746 134 HRAAGGFGGLCIH 146 (561)
Q Consensus 134 q~~~Gl~G~liV~ 146 (561)
||.|.|+|+
T Consensus 98 ----~M~G~I~V~ 106 (106)
T 1id2_A 98 ----FMRGKVIVE 106 (106)
T ss_dssp ----TCEEEEEEC
T ss_pred ----CCEEEEEEC
Confidence 999999984
No 108
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.18 E-value=2e-06 Score=71.15 Aligned_cols=84 Identities=14% Similarity=0.046 Sum_probs=58.0
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCc-eeEEEeCCCcEEEEEEEeCCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVS-RYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~-rDTv~vp~~g~~~irf~adnpG~ 505 (561)
.+.++.|++|+|+ |.+...|.++++.-... .+.+.... ..+.+ .+++.+.||+...+.| +.||.
T Consensus 18 ~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp EEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--CCCeE
Confidence 5778999998874 77778899998731110 00000000 00112 3667788998888876 89999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||+ .|...||...+.|.
T Consensus 83 y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CCcccCCeEEEEEC
Confidence 999999 79999999999873
No 109
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.06 E-value=8.1e-06 Score=85.95 Aligned_cols=96 Identities=14% Similarity=0.061 Sum_probs=65.1
Q ss_pred CCCeee--eEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEec
Q 046746 42 PLGIPQ--QGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVK 119 (561)
Q Consensus 42 ~dG~~~--~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~ 119 (561)
++|.+. .|...+-.|-.+.|+|++||+|++.++|.....-.+ ||..... -| +..-+.||++.++.|+ +
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lG---IK~DaiPGrtnsvtFt-a 608 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HG---VSMEISPQQTSSITFV-A 608 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TT---EEEEECTTCEEEEEEE-C
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CC---ceeeeCCCCeEEEEEE-c
Confidence 345443 344556667677999999999999999963211122 2222111 01 1245889999999999 4
Q ss_pred CceeeeeEecCch-hhhccCceeEEEEec
Q 046746 120 DQIGSYIYHPSTG-FHRAAGGFGGLCIHS 147 (561)
Q Consensus 120 ~~~Gt~wYH~H~~-~q~~~Gl~G~liV~~ 147 (561)
+++|+|||+|+.. .....+|.|.|+|++
T Consensus 609 dkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 609 DKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 7899999999853 223357999999987
No 110
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.03 E-value=1e-05 Score=69.05 Aligned_cols=74 Identities=11% Similarity=0.042 Sum_probs=49.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|+|++||+|++ .|.-. .++++... ...-+|.. ...+.||++++|.|+ ++|+|||+|..|..
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF--- 83 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE---
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc---
Confidence 46899999998655 56533 33333332 11112211 134578999999984 69999999987543
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999874
No 111
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.98 E-value=1.6e-05 Score=65.19 Aligned_cols=82 Identities=10% Similarity=0.071 Sum_probs=58.5
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|.++++...+. . + .+. ... ...++.+.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~--~-~~~-----~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---S--G-VDA-----SKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC---T--T-CCH-----HHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc---c--c-ccc-----ccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 3577899998877 788778999999875430 0 0 000 000 0113556778898887766 69999
Q ss_pred eeeecccchhhhccceEEEEE
Q 046746 506 WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V 526 (561)
|.|||+ .|...||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 6999999999887
No 112
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.96 E-value=1.1e-05 Score=69.57 Aligned_cols=92 Identities=18% Similarity=0.083 Sum_probs=58.7
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCC-------CeeeeeCCccC-------CCC------CCCCCCCc-cCCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDE-------PFLLTWPGIQH-------KKN------SWQDGVLG-TNCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~-------~~~iH~HG~~~-------~~~------~~~DGv~~-~q~~i~PG~~~ 112 (561)
+|--..|.| ++||+|+|+|+|.-.. +..|--+|..+ ... +..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443458999 9999999999998643 23332232100 000 00111000 02358999999
Q ss_pred EEEEEec-Cceee-eeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK-DQIGS-YIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+..|+++ -++|+ |||.|-...+.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999963 04655 999998766666 8999999963
No 113
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.92 E-value=2.1e-05 Score=65.29 Aligned_cols=71 Identities=10% Similarity=-0.038 Sum_probs=50.9
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+| .|.+...|.+|+|... .|. +. -++-.+.+|+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~-------------~~-~~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE-------------AA-LKGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS-------------SC-EECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc-------------cc-ccccccCCCCEEEEEe--CCCEEE
Confidence 467899999888 5887788999988522 111 00 1222367888776665 899999
Q ss_pred eeecccchhhhccceEEEEE
Q 046746 507 NLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V 526 (561)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 54 99888877
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.85 E-value=9.3e-05 Score=63.53 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=58.6
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCCC-----e--eeeeCCccC-------CCCCCCCCC----Cc-c--CCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDEP-----F--LLTWPGIQH-------KKNSWQDGV----LG-T--NCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~--~iH~HG~~~-------~~~~~~DGv----~~-~--q~~i~PG~~~ 112 (561)
+|--..|.| ++||+|+|+|+|.-..+ + .|--.|..+ .....+|=+ +. . ...|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454458999 99999999999986432 3 332222110 000011100 10 1 2348999999
Q ss_pred EEEEEecC-ceee-eeEecCchhhhccCceeEEEEe
Q 046746 113 TYYLQVKD-QIGS-YIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 113 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
++.|+++. ++|+ |||.|....+.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999631 4776 999998776777 899999984
No 115
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.83 E-value=4.6e-05 Score=65.44 Aligned_cols=92 Identities=18% Similarity=0.104 Sum_probs=59.0
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCCC-----eeee--eCC---------ccC----CCCCCCCCCCcc-CCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDEP-----FLLT--WPG---------IQH----KKNSWQDGVLGT-NCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~~iH--~HG---------~~~----~~~~~~DGv~~~-q~~i~PG~~~ 112 (561)
+|--..|.| +.||+|+|+++|.-..+ +++- -.+ +.. .--+..|.--.. ...|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454458999 99999999999986443 3322 111 000 000001110000 2347999999
Q ss_pred EEEEEec-Cceee-eeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK-DQIGS-YIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
++.|+++ -++|+ |+|.|....+.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 9999963 15885 999998776766 8999999963
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.79 E-value=5.4e-05 Score=81.38 Aligned_cols=75 Identities=8% Similarity=0.120 Sum_probs=60.3
Q ss_pred EEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 427 VMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
.+.++.|+.|+|.+.|.+ +..|.|+++++.+. ..+.||....++|.++.|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~p 566 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAANP 566 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSC
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCCC
Confidence 467899999999999964 34799988775321 457889999999999999
Q ss_pred ceeeeeccc---chhhhccceEEEEEecCC
Q 046746 504 GMWNLRSNI---WERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 504 G~w~~HCHi---l~H~d~GMm~~~~V~~~~ 530 (561)
|.|.||||. ..|. ||...+.|.+++
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcCC
Confidence 999999993 3564 999999997653
No 117
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.77 E-value=9.9e-05 Score=65.67 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=59.8
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeE-------EEeCCCc--EEE
Q 046746 426 NVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYT-------IQVFPNC--WAA 495 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDT-------v~vp~~g--~~~ 495 (561)
..+.++.|+.|.+++.|.+ ...|-|-++.. +. .+.. . |...+. ..|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhc-----c----ccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 55666655522 11 0100 0 000111 1567888 899
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEE
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V 526 (561)
++|.+ .||.+.||||+--|...||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999999999999999887
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.21 E-value=0.00079 Score=57.26 Aligned_cols=75 Identities=8% Similarity=0.027 Sum_probs=51.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|+|+ |.+ ..|-+..+.. .+.. . .+.+.+.+|....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~--n~~-~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFV--PTD-KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEE--CSS-SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEE--ECC-CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 5778999999985 444 5676665421 1110 0 0122244677766665 899999
Q ss_pred eeecccchhhhccceEEEEEecCC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.|||- .|...||...+.|.++.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99996 69999999999998753
No 119
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.16 E-value=0.00093 Score=55.30 Aligned_cols=71 Identities=11% Similarity=-0.066 Sum_probs=49.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.|+ |.+...|.+++....- |. ...++-.+.+|....+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-------~~--------------~~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE--------------DAFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS--------------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-------Cc--------------ccccccccCCCCEEEEEe--CCCEEE
Confidence 4678999999885 7777778776653210 00 001233466788777766 899999
Q ss_pred eeecccchhhhccceEEEEE
Q 046746 507 NLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V 526 (561)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999987 65 99988877
No 120
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.13 E-value=0.0016 Score=53.01 Aligned_cols=80 Identities=13% Similarity=0.105 Sum_probs=55.2
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|+.|+| .|.+...|-+.++...+ . . .++. .....+...+.+|....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~----------p-~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV----------P-A---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS----------C-T---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC----------c-c---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 3578899999888 47766778776654111 0 0 0000 00113456788999888776 89999
Q ss_pred eeeecccchhhhccceEEEEE
Q 046746 506 WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V 526 (561)
|.|+|-+ |...||-..+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999986 988899998877
No 121
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.00065 Score=58.13 Aligned_cols=75 Identities=13% Similarity=0.017 Sum_probs=49.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|++.|. .|-+..+.. .+ |... ..+.+.||+...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 57789999999966552 455444321 01 1100 111224677655555 899999
Q ss_pred eeecccchhhhccceEEEEEecCC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.|||- .|...||...+.|.++.
T Consensus 77 ~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEeC--CCCcCCcEEEEEECcCC
Confidence 99999 59999999999998754
No 122
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.06 E-value=0.0035 Score=52.94 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=55.1
Q ss_pred cCCCCeEEecC-CCEEEEEEEeCCCC-------Ceeeee---------CCccCCCCCCCCCC----Ccc---CCccCCCC
Q 046746 55 QFPGPNINSTT-NDNLVINVFNKLDE-------PFLLTW---------PGIQHKKNSWQDGV----LGT---NCPIPPGK 110 (561)
Q Consensus 55 ~~pgP~i~v~~-Gd~v~v~v~N~l~~-------~~~iH~---------HG~~~~~~~~~DGv----~~~---q~~i~PG~ 110 (561)
+|--..|.|+. |++|+|+|+|.... +..|-- -|+.. .+.+|=+ +-+ ...|.||+
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~--~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMAS--GLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHH--CGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhc--ChhhccCCCCCccceeccceeCCCc
Confidence 45557899976 99999999999743 332221 11110 0011111 111 33489999
Q ss_pred eEEEEEEec--CceeeeeEecCchhhhccCceeEEEEe
Q 046746 111 NYTYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 111 ~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
+++..|+.+ .++|+|.|.|. .+. ||.|.++|.
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999999975 26999999999 344 899999984
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.01 E-value=0.0016 Score=55.38 Aligned_cols=74 Identities=11% Similarity=0.059 Sum_probs=50.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|++.|. .|-+..+.. .+ +... +.+.+.||+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 57789999999977762 355544321 11 1100 111234677666666 899999
Q ss_pred eeecccchhhhccceEEEEEecC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
.|+|- .|...||-..+.|.++
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESSS
T ss_pred EEEeC--CCCcCCcEEEEEECCC
Confidence 99999 6999999999999863
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.00 E-value=0.0016 Score=56.24 Aligned_cols=72 Identities=11% Similarity=-0.063 Sum_probs=50.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+|+ |.+...|-+++....- |. ...++-.+.+|+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~~-------g~--------------~~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE--------------DAFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS--------------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCCC-------Cc--------------ccccccccCCCCEEEEEc--CCCEEE
Confidence 4678999999884 8777778877643210 00 001333467888877776 799999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||-+ |. ||...+.|+
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999987 66 999988773
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.73 E-value=0.0081 Score=51.85 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=52.2
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhcc
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRAA 137 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (561)
..|.+..|++|++.++|. +.. |+..... -| +..-+.||+.-++.|+. +++|+|+|+|..- .....
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~ 125 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TN---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 125 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SS---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTST
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CC---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcC
Confidence 489999999999999997 222 3332211 11 12346899988899984 7899999999541 11224
Q ss_pred CceeEEEEec
Q 046746 138 GGFGGLCIHS 147 (561)
Q Consensus 138 Gl~G~liV~~ 147 (561)
+|.|.++|.+
T Consensus 126 ~M~g~v~V~~ 135 (135)
T 2cua_A 126 NMFGTIVVKE 135 (135)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 8999998864
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.33 E-value=0.019 Score=51.32 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=56.9
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCc-
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST- 131 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~- 131 (561)
+-.|--..|.+..|++|++.++|. +.-++...-++ +++.-+.||+..++.|+ ++++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~l------------gik~da~PG~~n~~~~~-~~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGT------------NINVEVLPGEVSTVRYT-FKRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTS------------SCEEEECTTBCEEEEEE-CCSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCC------------CeEEEecCCceeEEEEE-eCCCEEEEEECCcC
Confidence 334434589999999999999997 33333322222 11234679999999998 4789999999984
Q ss_pred hhhhccCceeEEEEec
Q 046746 132 GFHRAAGGFGGLCIHS 147 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (561)
-.....+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 2444567999999874
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.10 E-value=0.012 Score=49.84 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=29.9
Q ss_pred CCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecC
Q 046746 489 FPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 489 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
.+|....+. ++.||.|.|+|- .|...||...+.|.++
T Consensus 59 ~pG~t~~~t--F~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENYVLT--VTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCEEEE--CCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEEEEE--eCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 467765544 488999999997 4999999999999763
No 128
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.95 E-value=0.024 Score=59.89 Aligned_cols=76 Identities=8% Similarity=0.111 Sum_probs=59.3
Q ss_pred eEEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC
Q 046746 426 NVMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn 502 (561)
..+.++.|+.|+|++.|.+ +..|.|-+.+... -+.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 3567999999999999974 5677776655322 125677899999999999
Q ss_pred cceeeeecccchhh-hccceEEEEEec
Q 046746 503 AGMWNLRSNIWERN-YLGQQLYLSVRL 528 (561)
Q Consensus 503 pG~w~~HCHil~H~-d~GMm~~~~V~~ 528 (561)
||.|.+||...-|. |.+|...+.|++
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999976554 568888888753
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.93 E-value=0.012 Score=49.92 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=30.1
Q ss_pred CCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecC
Q 046746 489 FPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 489 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
.+|....+.| +.||.|.|+|- .|...||...+.|.++
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 59 TVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 4677655554 88999999998 4999999999999764
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.24 E-value=0.067 Score=46.03 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=50.7
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 428 MDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
+.++.|+.|+|++.|.+ ..|. |+|-+ ++ --+.+.||....+.|.++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~-------------~~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEG-------------TN-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETT-------------SS-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecC-------------CC-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 56899999999999874 4443 43311 11 113456788888999999999999
Q ss_pred eecccch-hhhccceEEEEEe
Q 046746 508 LRSNIWE-RNYLGQQLYLSVR 527 (561)
Q Consensus 508 ~HCHil~-H~d~GMm~~~~V~ 527 (561)
++|...- .-|.+|-..+.|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9997621 1335888888875
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.19 E-value=0.044 Score=48.89 Aligned_cols=91 Identities=9% Similarity=-0.017 Sum_probs=60.0
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEeecCCCCCcC-------CCCCCC-CCC-CCceeEEEeCCC
Q 046746 427 VMDA-TYKAFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPGTWNPD-------KRKSYN-LID-AVSRYTIQVFPN 491 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~-------~~~~~n-~~~-P~~rDTv~vp~~ 491 (561)
-+.+ +.|+.|.|+|.|.+.. .|-|-| ...+. +... ....|- ..+ -....|..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 3678 8999999999998754 254433 22210 0000 000000 001 123456678999
Q ss_pred cEEEEEEEeC--CcceeeeecccchhhhccceEEEEEe
Q 046746 492 CWAAILVSMD--NAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 492 g~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999987 8999999999888888 898888885
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.13 E-value=0.037 Score=46.77 Aligned_cols=71 Identities=6% Similarity=-0.012 Sum_probs=45.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+ |.+. .|-++++. +.+.. ... .+.+.+|....+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~-~~~-----------~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPD-GAE-----------AFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCT-TCC-----------CCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCC-Ccc-----------eeecCCCCEEEEEe--CCCEEE
Confidence 5678999998885 4443 56666543 11111 000 11224677666665 899999
Q ss_pred eeecccchhhhccceEEEEEec
Q 046746 507 NLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~ 528 (561)
.|+|-+ |.. |...+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 655 988998876
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.46 E-value=0.14 Score=43.63 Aligned_cols=91 Identities=8% Similarity=0.027 Sum_probs=60.0
Q ss_pred EEecCCC-cEEEEEEEcCCCC-----CCceeecCCceEEEeecCCCCCc-------CCC-CCCCC-CCC-CceeEEEeCC
Q 046746 427 VMDATYK-AFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPGTWNP-------DKR-KSYNL-IDA-VSRYTIQVFP 490 (561)
Q Consensus 427 ~~~~~~g-~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~-------~~~-~~~n~-~~P-~~rDTv~vp~ 490 (561)
-+.++.| +.|.+++.|.+.. .|-|- +...+. ... ... ..+-. .++ ....|..|.|
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 4778999 9999999998754 35443 332210 000 000 00000 011 1235667889
Q ss_pred CcEEEEEEEeC---CcceeeeecccchhhhccceEEEEEe
Q 046746 491 NCWAAILVSMD---NAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 491 ~g~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|++..+.|.++ .||.|-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 8999999999888888 898888885
No 134
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.81 E-value=0.25 Score=44.00 Aligned_cols=72 Identities=10% Similarity=0.191 Sum_probs=54.1
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 428 MDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
+.++.|+.|++.+.|. +..|.|-+=... =-+.+.||..-.+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------------------------ik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS---------------------------CEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC---------------------------eEEEecCCceeEEEEEeCCCEEEE
Confidence 5689999999999997 555655442211 113355788888999999999999
Q ss_pred eeccc-chhhhccceEEEEEe
Q 046746 508 LRSNI-WERNYLGQQLYLSVR 527 (561)
Q Consensus 508 ~HCHi-l~H~d~GMm~~~~V~ 527 (561)
+.|.. --+.|.+|...+.|+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 346678999998885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=93.33 E-value=0.22 Score=42.27 Aligned_cols=91 Identities=8% Similarity=-0.073 Sum_probs=59.2
Q ss_pred EEec-CCCcEEEEEEEcCCCCC-----CceeecCCceEEEeecCCCCCcC-------CC-CCCC-CCCC-CceeEEEeCC
Q 046746 427 VMDA-TYKAFMEIVLENRQNTM-----QSWILDGYAFFAVGMEPGTWNPD-------KR-KSYN-LIDA-VSRYTIQVFP 490 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~~-----HP~HlHG~~F~Vl~~~~g~~~~~-------~~-~~~n-~~~P-~~rDTv~vp~ 490 (561)
-+.+ +.|+.|.+++.|.+... |-|-| ...+ ..... .. ..|- -.++ ....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4677 77999999999987553 65433 2211 00000 00 0010 0111 2335667899
Q ss_pred CcEEEEEEEeC--Ccce-eeeecccchhhhccceEEEEEe
Q 046746 491 NCWAAILVSMD--NAGM-WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 491 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|++..+.|.+. .||. |-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999888888 899988884
No 136
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=92.26 E-value=0.42 Score=40.62 Aligned_cols=91 Identities=10% Similarity=-0.065 Sum_probs=58.8
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEeecCCCCCcC-------CC-CCCCC-CCC-CceeEEEeCC
Q 046746 427 VMDA-TYKAFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPGTWNPD-------KR-KSYNL-IDA-VSRYTIQVFP 490 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~-------~~-~~~n~-~~P-~~rDTv~vp~ 490 (561)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+ ..... .+ ..|-. .++ ....|..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 4678 7799999999998755 354433 2221 00000 00 00100 011 1234567899
Q ss_pred CcEEEEEEEeC--Ccce-eeeecccchhhhccceEEEEEe
Q 046746 491 NCWAAILVSMD--NAGM-WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 491 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|++..+.|.++ .||. |-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7866 999999888888 899888884
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.22 E-value=0.45 Score=40.33 Aligned_cols=92 Identities=10% Similarity=-0.020 Sum_probs=58.5
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEeecCC------CCCcCCCCCC-CCCCC-CceeEEEeCCCc
Q 046746 427 VMDA-TYKAFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPG------TWNPDKRKSY-NLIDA-VSRYTIQVFPNC 492 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~-n~~~P-~~rDTv~vp~~g 492 (561)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+.- .........| .-.++ ....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4678 7999999999998755 365443 221100 0000000001 00111 223455689999
Q ss_pred EEEEEEEeC--Ccce-eeeecccchhhhccceEEEEE
Q 046746 493 WAAILVSMD--NAGM-WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 493 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 526 (561)
+..+.|.+. .||. |-|.|-+--|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7876 999999888888 88888877
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=87.04 E-value=0.77 Score=38.57 Aligned_cols=93 Identities=10% Similarity=0.023 Sum_probs=57.1
Q ss_pred eEEecCC-CcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCc-------CCC-CCC-CC-CCCCceeEEEeCCCcEE
Q 046746 426 NVMDATY-KAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNP-------DKR-KSY-NL-IDAVSRYTIQVFPNCWA 494 (561)
Q Consensus 426 ~~~~~~~-g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~-------~~~-~~~-n~-~~P~~rDTv~vp~~g~~ 494 (561)
.-+.++. |+.|.++|.|.+..+ --.=||.| ||+... .... ..+ ..| .. .......|..|.||+..
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceE-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 3467876 999999999987542 00002333 333311 0000 000 011 00 12245577789999999
Q ss_pred EEEEEeC---CcceeeeecccchhhhccceEEEEE
Q 046746 495 AILVSMD---NAGMWNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 495 ~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 526 (561)
.|.|.+. .+|.|-|-|- -|. ||-..+.|
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999987 8999999999 688 89888877
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=85.13 E-value=6.4 Score=32.67 Aligned_cols=71 Identities=14% Similarity=0.330 Sum_probs=49.9
Q ss_pred cCCE--EEEEEEEcCCCceEEEEEe-CcccEEEe--ecCcccc--------eeeeeeEEEcccceEEEEEEeCC--CCCc
Q 046746 221 AGKV--YKYRICNVGVKTSLNFRIQ-GHTMKLVE--MEGSHVV--------QNEYESLDVHVGQCFTVLVTANQ--DPKD 285 (561)
Q Consensus 221 ~G~~--~rlRliN~~~~~~~~~~i~-gh~~~via--~DG~~~~--------p~~~~~v~l~pgeR~dv~v~~~~--~~g~ 285 (561)
.|+. ..|.+.|.+.. ...+.+. |+.+.++- .+|..+- .+......|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 4444 45778898884 4477775 66544444 4576552 23567899999999999999884 5799
Q ss_pred eEEEEEe
Q 046746 286 YYLIAST 292 (561)
Q Consensus 286 y~i~~~~ 292 (561)
|.+.+.-
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998864
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=73.33 E-value=5 Score=36.61 Aligned_cols=76 Identities=8% Similarity=0.044 Sum_probs=53.0
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
-+.++.|+.|++.|.+.+ ..| .|+|-+-+ .. +.+-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~D-ViH-------SF~IP~lg-----------------vK---~daiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS-VMH-------SFFIPRLG-----------------SQ---IYAMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESS-SCE-------EEEEGGGT-----------------EE---EEECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCC-cee-------eEEecccC-----------------cE---EEecCCceEEEEEEeCCCeEE
Confidence 467899999999999874 334 44442211 11 234467888899999999999
Q ss_pred eeecccchhh-hccceEEEEEe-cCC
Q 046746 507 NLRSNIWERN-YLGQQLYLSVR-LHK 530 (561)
Q Consensus 507 ~~HCHil~H~-d~GMm~~~~V~-~~~ 530 (561)
...|--.-.. +..|-..+.|. .++
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIATPDRA 119 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEESSHH
T ss_pred EEEcccccccchhhceEEEEEECCHH
Confidence 9999866444 55677778787 443
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=70.28 E-value=45 Score=27.52 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=47.9
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc----CCccCCCCeEEEEEEecC--
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT----NCPIPPGKNYTYYLQVKD-- 120 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~----q~~i~PG~~~~Y~f~~~~-- 120 (561)
..+-..|-.-=.=+|+...|.+..+.|.+.-. ...| -|+||-... ...|.||++.+|+...++
T Consensus 22 ~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G---~~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~ 90 (120)
T 3isy_A 22 FNMSLKNQSERAIEFQFSTGQKFELVVYDSEH---KERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVP 90 (120)
T ss_dssp EEEEEEECSSSCEEEEESSSCCEEEEEECTTC---CEEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCC
T ss_pred EEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC---CEEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCC
Confidence 34444454443457788888888888887532 1222 257776555 345999999999999874
Q ss_pred ceeeeeEec
Q 046746 121 QIGSYIYHP 129 (561)
Q Consensus 121 ~~Gt~wYH~ 129 (561)
.+|+|..+.
T Consensus 91 ~pG~Ytl~a 99 (120)
T 3isy_A 91 EPGTYEVKV 99 (120)
T ss_dssp CSEEEEEEE
T ss_pred CCccEEEEE
Confidence 489998764
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=65.12 E-value=12 Score=36.27 Aligned_cols=78 Identities=10% Similarity=0.170 Sum_probs=55.9
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+-+.+|.|+.|++.+.+.+ ..|.|.+=.. +--+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP~l---------------------------g~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIPAF---------------------------AVKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEGGG---------------------------TEEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEccc---------------------------CceEEecCCceEEEEEEeCCCEE
Confidence 4467899999999999864 4455444211 11233446778889999999999
Q ss_pred eeeecccc-hhhhccceEEEEEecCCc
Q 046746 506 WNLRSNIW-ERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 506 w~~HCHil-~H~d~GMm~~~~V~~~~~ 531 (561)
+...|.-. -.-|..|-..++|..+++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHH
Confidence 99999965 345677888888887654
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=61.53 E-value=14 Score=35.09 Aligned_cols=77 Identities=9% Similarity=0.074 Sum_probs=53.8
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+-+.+|.|+.|++.+.+.+ ..|. |+|=+-+ ...| +-||..-.+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~D-ViHs-------f~ip~l~-----------------~k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VIHS-------WTVPAFG-----------------VKQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEE-------EEEGGGT-----------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECc-ccce-------eeecccC-----------------ceEE---ecCCceeEEEEecCCcEE
Confidence 4477899999999999874 3444 4442111 1234 345777889999999999
Q ss_pred eeeecccchhh-hccceEEEEEecCC
Q 046746 506 WNLRSNIWERN-YLGQQLYLSVRLHK 530 (561)
Q Consensus 506 w~~HCHil~H~-d~GMm~~~~V~~~~ 530 (561)
+...|--.--. |..|-..++|..++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEE 248 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHH
Confidence 99999865433 56777788887664
No 144
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=56.60 E-value=42 Score=30.50 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=45.4
Q ss_pred ceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeec
Q 046746 215 PLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRF 294 (561)
Q Consensus 215 p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 294 (561)
..+.+..|+.+||+|-+.. ..+.|.|.....++ ...||..-.+-+.++ .+|.|+.+++...
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeC-CCeEEEEEccccc
Confidence 5688999999999998754 46677776544333 455777777777777 7999999997653
No 145
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=52.61 E-value=46 Score=32.79 Aligned_cols=18 Identities=33% Similarity=0.630 Sum_probs=15.4
Q ss_pred CCccCCCCeEEEEEEecC
Q 046746 103 NCPIPPGKNYTYYLQVKD 120 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~ 120 (561)
..||+|||+.+.+.++.+
T Consensus 319 ~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 319 NSPLAPGETRTVDVTASD 336 (382)
T ss_dssp CSCBCTTCEEEEEEEEEC
T ss_pred CCCcCCCceeEEEEEeeh
Confidence 678999999999998743
No 146
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=52.28 E-value=36 Score=27.73 Aligned_cols=46 Identities=13% Similarity=0.366 Sum_probs=31.9
Q ss_pred EEEEEEEEcCCCc-eEEEEEeCc-ccEEEeecCcccceeeeeeEEEcccceEEEEEEe
Q 046746 224 VYKYRICNVGVKT-SLNFRIQGH-TMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTA 279 (561)
Q Consensus 224 ~~rlRliN~~~~~-~~~~~i~gh-~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~ 279 (561)
.|+|+|+|.+... .+.|++.|. .+++++ + ..+.+.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 6899999999765 667777764 244332 1 13899999987776654
No 147
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=52.16 E-value=21 Score=33.17 Aligned_cols=78 Identities=8% Similarity=0.070 Sum_probs=53.3
Q ss_pred ceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
.+.+.+|.|+.|++.+.+.+ ..|. |+|=+-+ .+.| .-||..-.+.|.++.||
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D-ViHs-------f~vP~lg-----------------~K~D---aiPGr~n~~~~~~~~~G 190 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED-VLHS-------WAVPSLG-----------------LKTD---AIPGRLNQTTLMSSRPG 190 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS-SCEE-------EEEGGGT-----------------EEEE---ECTTCCEEEEECCSSCE
T ss_pred CceEEEecCCEEEEEEEeCc-ccce-------eeecccC-----------------cEEE---ecCCceEEEEEecCCcE
Confidence 34567899999999998864 4454 4441111 1234 34577778899999999
Q ss_pred eeeeecccchhh-hccceEEEEEecCC
Q 046746 505 MWNLRSNIWERN-YLGQQLYLSVRLHK 530 (561)
Q Consensus 505 ~w~~HCHil~H~-d~GMm~~~~V~~~~ 530 (561)
.+...|.-.-.. |.-|-..++|..++
T Consensus 191 ~y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 191 LYYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEEehhhcccccccCeEEEEEEcHH
Confidence 999999865433 55677777777654
No 148
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=49.11 E-value=19 Score=30.59 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=28.0
Q ss_pred EEe-CCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 498 VSM-DNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 498 f~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
|.- +.+|.+.|=|=...|=..||-+.+.|.....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 344 6799999999999999999999999986543
No 149
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=46.44 E-value=19 Score=30.12 Aligned_cols=47 Identities=21% Similarity=0.307 Sum_probs=28.3
Q ss_pred EEEEEeCCCCCe---eeeeCCccCCC---CCCCCCCCccCCccCCCCeEEEEE
Q 046746 70 VINVFNKLDEPF---LLTWPGIQHKK---NSWQDGVLGTNCPIPPGKNYTYYL 116 (561)
Q Consensus 70 ~v~v~N~l~~~~---~iH~HG~~~~~---~~~~DGv~~~q~~i~PG~~~~Y~f 116 (561)
.|++.|.-..+. +=||.=.+-.+ .-..+||-|-|.-|.||++|+|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 477788776553 45775332111 112456655577799999888753
No 150
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=44.08 E-value=62 Score=30.62 Aligned_cols=76 Identities=17% Similarity=0.112 Sum_probs=50.4
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhcc
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRAA 137 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (561)
..|.+..|+.|++.+++. +.-++...-.+ +++.-+-||..-...|. ++++|+|+..|..- .....
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l------------~~k~da~PG~~n~~~~~-~~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAF------------GVKQDAVPGRLAQLWFR-AEREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGG------------TEEEEECBTCCEEEEEE-CCSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeeccc------------CceEEecCCceeEEEEe-cCCcEEEEEEChHhcccCcc
Confidence 469999999999999987 22222222222 11233568998888898 58899999999732 22333
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
.|.+.+.|.++
T Consensus 237 ~M~~~v~vv~~ 247 (262)
T 2gsm_B 237 YMPITVKVVSE 247 (262)
T ss_dssp GCCEEEEEECH
T ss_pred cCeEEEEEEcH
Confidence 47777777663
No 151
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=43.58 E-value=19 Score=30.11 Aligned_cols=48 Identities=23% Similarity=0.277 Sum_probs=28.4
Q ss_pred EEEEEeCCCCCe---eeeeCCccCCC---CCCCCCCCccCCccCCCCeEEEEEE
Q 046746 70 VINVFNKLDEPF---LLTWPGIQHKK---NSWQDGVLGTNCPIPPGKNYTYYLQ 117 (561)
Q Consensus 70 ~v~v~N~l~~~~---~iH~HG~~~~~---~~~~DGv~~~q~~i~PG~~~~Y~f~ 117 (561)
.|++.|.-..+. +=||.=.+..+ .-..+||-|-|.-|.||++|+|.=-
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg 86 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSG 86 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCC
Confidence 477778766553 45775322111 1123555555777999998887643
No 152
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=42.85 E-value=39 Score=28.13 Aligned_cols=62 Identities=8% Similarity=0.133 Sum_probs=34.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCC---C--eeeee--CCccCCC-CCCCCCCCccCCccCCCCeEEEEEEec
Q 046746 58 GPNINSTTNDNLVINVFNKLDE---P--FLLTW--PGIQHKK-NSWQDGVLGTNCPIPPGKNYTYYLQVK 119 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~---~--~~iH~--HG~~~~~-~~~~DGv~~~q~~i~PG~~~~Y~f~~~ 119 (561)
.+.=.+..|..+.|.+.=..+. . +.+|+ .|+...- ....|+=-++.|||.+|+.++|.+.++
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 3445667788777777622221 1 12222 3443321 112333233479999999999998763
No 153
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=40.85 E-value=25 Score=29.84 Aligned_cols=48 Identities=19% Similarity=0.332 Sum_probs=28.3
Q ss_pred EEEEEeCCCCCe---eeeeCCccCCC---CCCCCCCCccCCccCCCCeEEEEEE
Q 046746 70 VINVFNKLDEPF---LLTWPGIQHKK---NSWQDGVLGTNCPIPPGKNYTYYLQ 117 (561)
Q Consensus 70 ~v~v~N~l~~~~---~iH~HG~~~~~---~~~~DGv~~~q~~i~PG~~~~Y~f~ 117 (561)
.|++.|.-..+. +=||.=.+..+ .-..+||-|-|.-|.||++|+|.=-
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg 91 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSG 91 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCC
Confidence 477778766553 45775332111 1123555555777999998887643
No 154
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=40.64 E-value=42 Score=27.97 Aligned_cols=61 Identities=21% Similarity=0.275 Sum_probs=33.6
Q ss_pred CeEEecCCCEEEEEEEeCCC---CCeeeee----CCccCC-CCCCCCCC-CccCCccCCCCeEEEEEEec
Q 046746 59 PNINSTTNDNLVINVFNKLD---EPFLLTW----PGIQHK-KNSWQDGV-LGTNCPIPPGKNYTYYLQVK 119 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~---~~~~iH~----HG~~~~-~~~~~DGv-~~~q~~i~PG~~~~Y~f~~~ 119 (561)
+.=.+..|..+.|.+.=..+ ....... -|+... ..+..|+= .++.|||.+|+.++|.+.++
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 44556777777777662211 1112222 233321 11223433 23579999999999998875
No 155
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=37.40 E-value=22 Score=30.01 Aligned_cols=48 Identities=23% Similarity=0.366 Sum_probs=28.1
Q ss_pred EEEEEeCCCCCe---eeeeCCccCCC---CCCCCCCCccCCccCCCCeEEEEEE
Q 046746 70 VINVFNKLDEPF---LLTWPGIQHKK---NSWQDGVLGTNCPIPPGKNYTYYLQ 117 (561)
Q Consensus 70 ~v~v~N~l~~~~---~iH~HG~~~~~---~~~~DGv~~~q~~i~PG~~~~Y~f~ 117 (561)
.|++.|.-..+. +=||.=.+..+ .-..+||-|-|.-|.||++|+|.=-
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg 86 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSG 86 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCC
Confidence 467778766553 45775322111 1123555555777999998887643
No 156
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=33.59 E-value=33 Score=33.51 Aligned_cols=76 Identities=11% Similarity=0.145 Sum_probs=51.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
-+.+|.|+.|++.+.+.+ ..|. |+|=+-+ ...| +-||....+.|.++.||.|
T Consensus 152 ~l~lP~g~~V~~~lTS~D-ViHs-------f~IP~lg-----------------~k~D---aiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS-VMNS-------FFIPRLG-----------------SQIY---AMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBSS-SCEE-------EEEGGGT-----------------EEEE---ECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeCC-ccce-------eeecccC-----------------cEEe---ecCCcceeeEEecCCCeEE
Confidence 356899999999888764 3454 4441111 1223 3457778899999999999
Q ss_pred eeecccchhh-hccceEEEEEe-cCC
Q 046746 507 NLRSNIWERN-YLGQQLYLSVR-LHK 530 (561)
Q Consensus 507 ~~HCHil~H~-d~GMm~~~~V~-~~~ 530 (561)
...|--.--. |..|-..++|. .++
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv~~~~ 229 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIATPDRA 229 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBCSSTH
T ss_pred EEeccccchhhHHhccceEEEecCHH
Confidence 9999865433 55677777777 443
No 157
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=33.57 E-value=82 Score=30.41 Aligned_cols=76 Identities=13% Similarity=-0.001 Sum_probs=51.8
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhcc
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRAA 137 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (561)
..|.+..|+.|++.+++. -.|| +..... . +++.-.-||..-+..|. ++++|+|+..|..- .....
T Consensus 189 N~lvlP~g~~V~~~ltS~----DViH--sf~iP~---l----g~k~daiPG~~n~~~~~-~~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT----DVIH--AWTIPA---F----AVKQDAVPGRIAQLWFS-VDQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES----SSCE--EEEEGG---G----TEEEEECTTCCEEEEEE-CSSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC----Cccc--eeeEcc---c----CceEEecCCceEEEEEE-eCCCEEEEEEcccccCcCcc
Confidence 579999999999999996 2343 222110 0 11233568998888898 58899999999742 33444
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
.|.+.+.|.++
T Consensus 255 ~M~~~v~vvs~ 265 (298)
T 3hb3_B 255 YMPIVVKAVSQ 265 (298)
T ss_dssp SCCEEEEEECH
T ss_pred CCeeEEEEEcH
Confidence 57788777764
No 158
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=31.48 E-value=1.1e+02 Score=30.38 Aligned_cols=16 Identities=25% Similarity=0.571 Sum_probs=14.1
Q ss_pred ccCCCCeEEEEEEecC
Q 046746 105 PIPPGKNYTYYLQVKD 120 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~ 120 (561)
||.|||+.+.+.++.+
T Consensus 353 pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 353 VIAPGESKEIVVKIQD 368 (419)
T ss_dssp CBCTTCEEEEEEEEEC
T ss_pred CcCCCcceEEEEEeeh
Confidence 8999999999998743
No 159
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=27.97 E-value=1.4e+02 Score=27.47 Aligned_cols=76 Identities=12% Similarity=-0.074 Sum_probs=48.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRA 136 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~ 136 (561)
...|.+..|+.|++.++... .-++.....+. ++.-.-||..-+..|. ++++|+|+..|..- ....
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D-ViHsf~vP~lg------------~K~DaiPGr~n~~~~~-~~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED-VLHSWAVPSLG------------LKTDAIPGRLNQTTLM-SSRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS-SCEEEEEGGGT------------EEEEECTTCCEEEEEC-CSSCEEEEECCCSCCSTTG
T ss_pred CceEEEecCCEEEEEEEeCc-ccceeeecccC------------cEEEecCCceEEEEEe-cCCcEEEEEEehhhccccc
Confidence 36799999999999999862 22222222221 1223567888888888 58899999999732 2222
Q ss_pred cCceeEEEEec
Q 046746 137 AGGFGGLCIHS 147 (561)
Q Consensus 137 ~Gl~G~liV~~ 147 (561)
.-|.+.+.|.+
T Consensus 205 s~M~~~v~vv~ 215 (227)
T 1v54_B 205 SFMPIVLELVP 215 (227)
T ss_dssp GGCCEEEEEEC
T ss_pred ccCeEEEEEEc
Confidence 23666666655
No 160
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=27.93 E-value=55 Score=26.06 Aligned_cols=54 Identities=15% Similarity=0.006 Sum_probs=34.4
Q ss_pred CEEEEEEEeCCCCC---eeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEe-cCceeee
Q 046746 67 DNLVINVFNKLDEP---FLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQV-KDQIGSY 125 (561)
Q Consensus 67 d~v~v~v~N~l~~~---~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~-~~~~Gt~ 125 (561)
=.+.|.|+|-|+.+ ..++.-|.-. .++.-.-...|.||++..+++.. |..+|..
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRPKILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTT-----EEEEEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCC-----CcceEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 35678899999764 3566666311 12210002459999999999987 5557754
No 161
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=25.85 E-value=67 Score=26.22 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=27.6
Q ss_pred EEEEecCceeeeeEecCchhhhccCceeEE-EEecCC
Q 046746 114 YYLQVKDQIGSYIYHPSTGFHRAAGGFGGL-CIHSRS 149 (561)
Q Consensus 114 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 149 (561)
..+++ +.+|++||-|-...+=..||...+ .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 45666 469999999988877788999999 887643
No 162
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=24.42 E-value=2.9e+02 Score=22.85 Aligned_cols=65 Identities=14% Similarity=0.185 Sum_probs=36.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCC--------CccCCccCCCCeEEEEEEecCceeee
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGV--------LGTNCPIPPGKNYTYYLQVKDQIGSY 125 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~q~~i~PG~~~~Y~f~~~~~~Gt~ 125 (561)
|=+|.++.||++.|.|.-+-....+=..... .+..-.|++ |.....+..|+...+.|++ .++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEE-ccCceE
Confidence 5589999999999999977543333222221 111112222 1001234556778888885 457753
No 163
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=24.12 E-value=34 Score=27.09 Aligned_cols=24 Identities=17% Similarity=-0.068 Sum_probs=21.2
Q ss_pred eEEEECCcCCCCeEEecCCCEEEE
Q 046746 48 QGILINGQFPGPNINSTTNDNLVI 71 (561)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~v 71 (561)
..+++||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999998888888999999987
No 164
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=23.86 E-value=2.2e+02 Score=24.98 Aligned_cols=75 Identities=11% Similarity=-0.006 Sum_probs=43.2
Q ss_pred ceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeee----eeE--E-EcccceEEEEEEeCC--CCCc
Q 046746 215 PLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY----ESL--D-VHVGQCFTVLVTANQ--DPKD 285 (561)
Q Consensus 215 p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~----~~v--~-l~pgeR~dv~v~~~~--~~g~ 285 (561)
+.-.+..|+.++||+---.....-.+.+ -|.+...+|..+-.... ..+ . +.+|+.+.+.+.+.- .+|+
T Consensus 62 ~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~l~L~~G~ 138 (188)
T 2r5o_A 62 FPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFSLPVDLNSGD 138 (188)
T ss_dssp SCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEECCBCSEE
T ss_pred EeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEEEecccCCCe
Confidence 4445788998888876655443222222 24455566666522110 112 3 678997666555442 5899
Q ss_pred eEEEEEe
Q 046746 286 YYLIAST 292 (561)
Q Consensus 286 y~i~~~~ 292 (561)
|.+.+..
T Consensus 139 Y~lsv~i 145 (188)
T 2r5o_A 139 YLLSFGI 145 (188)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998764
No 165
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.79 E-value=1.9e+02 Score=28.45 Aligned_cols=112 Identities=14% Similarity=0.083 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHHHHHhhcccccCCCeEEEEEEEEEEEecCCCeeeeE-EEECCcCC------CCeEEecCCCEEEEEE
Q 046746 1 MVATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQG-ILINGQFP------GPNINSTTNDNLVINV 73 (561)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~dG~~~~~-~~~Ng~~p------gP~i~v~~Gd~v~v~v 73 (561)
|.+... ++++|++++++.+++. ..++.++......+.....+ ++=+|.-| + .+.-.+=+.+.|.
T Consensus 1 m~~~~~-~~~~a~~~la~~a~a~------~l~v~Ls~~~~~~~~~~vk~tvtN~g~~~~~lLk~~-~lD~~~~~~~~V~- 71 (343)
T 2x3c_A 1 MMKVTP-IALLLAGVLASPLCAA------GLDAQLTLVDGSTDDVRVNLTLTNTGDKPIRLLKWQ-LPGSDDAPLFLVE- 71 (343)
T ss_dssp -----------------------------CEEEEEEECCCSSSCCEEEEEEEECSSSCEEEEGGG-SCSSSCCCCEEEE-
T ss_pred CchHHH-HHHHHHHHHhhhcccC------ceEEEEEecccCCCCeEEEEEEEeCCCCceEeeccC-CCCcCccceEEEE-
Q ss_pred EeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecC-----ceeeeeEe
Q 046746 74 FNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKD-----QIGSYIYH 128 (561)
Q Consensus 74 ~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~-----~~Gt~wYH 128 (561)
.....+-+-|+.++.....+... ..|+||++.+.+|+++. ..|+|-++
T Consensus 72 ----~~G~~v~f~Gi~~~~~~~~~d~f---~~L~pG~Sve~~~dla~~ydLs~gG~y~v~ 124 (343)
T 2x3c_A 72 ----RDGQPVSYEGALIKRAAPTDKDF---QLLKAGQSLTVQAEVSGLYDMSAQGQYSIR 124 (343)
T ss_dssp ----ETTEECCBCSCCCCCCCCCGGGE---EEECTTCEEEEEEECTTTBTCCSCEEEEEE
T ss_pred ----eCCcccceeeEEEeccCCChhhc---EEeCCCCeEEEEEehhhccccCCCceEEEE
No 166
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=22.57 E-value=63 Score=25.27 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=35.8
Q ss_pred EEcCCEEEEEEEEcCCCceEEEEEeCc--ccEEEeecCcccceeeeeeEEEcccceEEEEEEeCC--CCCceEEEEEe
Q 046746 219 MKAGKVYKYRICNVGVKTSLNFRIQGH--TMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQ--DPKDYYLIAST 292 (561)
Q Consensus 219 v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~--~~g~y~i~~~~ 292 (561)
-++||++++|++--..... . ..+- .+++..-+|..+... .........++.-+.+.+ ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~-p--~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH-P--LNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC-B--CCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc-C--CCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 5799999999775433211 0 0111 244555555543221 112223345566666654 35899998874
No 167
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=22.13 E-value=77 Score=25.86 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=27.1
Q ss_pred EEEeCCcceeeeecccchhhhccceEEE-EEecC
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYL-SVRLH 529 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~ 529 (561)
+|..+.+|...|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 3455789999999999999999999999 77654
Done!