AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>046747
LHQKLFASLKNWLALLVIWQYTVPFLLNLSASATFFAILSHTPISLAVPVTNATTFAATA
FFGLLLGERTRVGFSLLGMASIVLGVWLCINT
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT5G19570 AT5G19570 AT5G19570	protein from Arabidopsis thaliana	3.8e-23
BLAST match view associations BLAST with DDB_G0277575 DDB_G0277575 DDB_G0277575 unknown	gene from Dictyostelium discoideum	1.1e-07
BLAST match view associations BLAST with TMEM234 TMEM234 TMEM234 Transmembrane protein 234	protein from Homo sapiens	1.1e-05
BLAST match view associations BLAST with Tmem234 Tmem234 Tmem234 transmembrane protein 234	protein from Mus musculus	6.3e-05
BLAST match view associations BLAST with TMEM234 TMEM234 TMEM234 Transmembrane protein 234	protein from Bos taurus	8.1e-05
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046747
        (92 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2180796 - symbol:AT5G19570 "AT5G19570" species...   267  3.8e-23   1
DICTYBASE|DDB_G0277575 - symbol:DDB_G0277575 "unknown" sp...   121  1.1e-07   1
UNIPROTKB|Q8WY98 - symbol:TMEM234 "Transmembrane protein ...   102  1.1e-05   1
MGI|MGI:1924049 - symbol:Tmem234 "transmembrane protein 2...    95  6.3e-05   1
UNIPROTKB|A7YW81 - symbol:TMEM234 "Transmembrane protein ...    94  8.1e-05   1
ASPGD|ASPL0000072949 - symbol:AN4565 species:162425 "Emer...    93  0.00024   1


>TAIR|locus:2180796 [details] [associations]
            symbol:AT5G19570 "AT5G19570" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR018908 Pfam:PF10639 OMA:WGATNAL EMBL:AY045790
            EMBL:AY079360 IPI:IPI00524189 RefSeq:NP_197458.1 UniGene:At.26173
            IntAct:Q94AU5 EnsemblPlants:AT5G19570.1 GeneID:832077
            KEGG:ath:AT5G19570 TAIR:At5g19570 eggNOG:KOG4831
            HOGENOM:HOG000230612 InParanoid:Q94AU5 PhylomeDB:Q94AU5
            ProtClustDB:CLSN2686796 ArrayExpress:Q94AU5 Genevestigator:Q94AU5
            Uniprot:Q94AU5
        Length = 137

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 46/90 (51%), Positives = 64/90 (71%)

Query:     1 LHQKLFASLKNWLALLVIWQYTVPFLLNLSASATFFAILSHTPISLAVPVTNXXXXXXXX 60
             + +K+  +L++W+ LL+ WQY++PFL+NLSASATFFA+LSH PISLAVPVTN        
Sbjct:    47 IRRKIMIALRDWINLLLFWQYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATA 106

Query:    61 XXXXXXXERTRVGFSLLGMASIVLGVWLCI 90
                    E T++G +LLG + IV G+WLC+
Sbjct:   107 AFGILLGEETQIGLALLGTSFIVFGIWLCV 136


>DICTYBASE|DDB_G0277575 [details] [associations]
            symbol:DDB_G0277575 "unknown" species:44689
            "Dictyostelium discoideum" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] dictyBase:DDB_G0277575 GO:GO:0016021
            EMBL:AAFI02000020 eggNOG:NOG320738 OMA:KCKREAS InterPro:IPR018908
            Pfam:PF10639 RefSeq:XP_642584.1 EnsemblProtists:DDB0232155
            GeneID:8621092 KEGG:ddi:DDB_G0277575 ProtClustDB:CLSZ2439341
            Uniprot:Q54ZG7
        Length = 128

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 26/72 (36%), Positives = 37/72 (51%)

Query:    21 YTVPFLLNLSASATFFAILSHTPISLAVPVTNXXXXXXXXXXXXXXXERTRVGFSLLGMA 80
             YT+P L+NLS S  FF  LS   ISL VP++N               E+     S LGM 
Sbjct:    55 YTIPMLINLSGSVVFFYTLSKVDISLVVPISNSLTFLFTSLMGMLLGEKVLHFKSYLGMI 114

Query:    81 SIVLGVWLCINT 92
              ++ GV +C+++
Sbjct:   115 FVLAGVTICVSS 126


>UNIPROTKB|Q8WY98 [details] [associations]
            symbol:TMEM234 "Transmembrane protein 234" species:9606
            "Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
            GO:GO:0016021 EMBL:CH471059 EMBL:AL049795 CTD:56063
            eggNOG:NOG320738 HOVERGEN:HBG057419 OMA:KCKREAS InterPro:IPR018908
            Pfam:PF10639 EMBL:AY358586 EMBL:AK075260 EMBL:AK312046
            EMBL:AF258548 EMBL:BC001256 EMBL:BC004885 EMBL:BC038842
            IPI:IPI00292222 IPI:IPI00385734 IPI:IPI00644491 IPI:IPI00853211
            RefSeq:NP_061991.3 UniGene:Hs.272299 ProteinModelPortal:Q8WY98
            DMDM:74760615 PRIDE:Q8WY98 DNASU:56063 Ensembl:ENST00000309777
            Ensembl:ENST00000344461 Ensembl:ENST00000373593
            Ensembl:ENST00000461402 Ensembl:ENST00000483001
            Ensembl:ENST00000489170 Ensembl:ENST00000491434 GeneID:56063
            KEGG:hsa:56063 UCSC:uc001buq.4 UCSC:uc009vub.1
            GeneCards:GC01M032681 HGNC:HGNC:28837 HPA:HPA015049
            neXtProt:NX_Q8WY98 PharmGKB:PA142672475 PhylomeDB:Q8WY98
            GenomeRNAi:56063 NextBio:61489 ArrayExpress:Q8WY98 Bgee:Q8WY98
            CleanEx:HS_C1orf91 Genevestigator:Q8WY98 Uniprot:Q8WY98
        Length = 164

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 26/94 (27%), Positives = 44/94 (46%)

Query:     1 LHQKLFAS--LKNWLALLVIWQYTVPFLLNLSASATFFAILSHTPISLAVPVTNXXXXXX 58
             +H+  +A   L+    L +  +Y +PFLLN   S  ++  L+ T ++LAVP+ N      
Sbjct:    35 VHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIF 94

Query:    59 XXXXXXXXXERTRVGFSLLGMASIVLGVWLCINT 92
                      E      ++ GM   V+G+ LCI +
Sbjct:    95 TLIVGKALGEDIGGKRAVAGMVLTVIGISLCITS 128


>MGI|MGI:1924049 [details] [associations]
            symbol:Tmem234 "transmembrane protein 234" species:10090
            "Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            MGI:MGI:1924049 GO:GO:0016021 EMBL:AL671759 CTD:56063
            eggNOG:NOG320738 GeneTree:ENSGT00390000013398 HOVERGEN:HBG057419
            OMA:KCKREAS OrthoDB:EOG44F6BR InterPro:IPR018908 Pfam:PF10639
            EMBL:AK050648 EMBL:BC024696 IPI:IPI00162849 RefSeq:NP_084024.1
            UniGene:Mm.293096 PRIDE:Q8R1E7 Ensembl:ENSMUST00000102591
            GeneID:76799 KEGG:mmu:76799 InParanoid:Q8R1E7 NextBio:345839
            Bgee:Q8R1E7 Genevestigator:Q8R1E7 Uniprot:Q8R1E7
        Length = 140

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 21/73 (28%), Positives = 35/73 (47%)

Query:    20 QYTVPFLLNLSASATFFAILSHTPISLAVPVTNXXXXXXXXXXXXXXXERTRVGFSLLGM 79
             +Y +PFLLN S S  ++  L+ T ++LAVP+ N               E      ++ GM
Sbjct:    56 EYLMPFLLNQSGSLLYYLTLASTDLTLAVPICNSLAIVFTLIVGKVLGEDIGGKEAVAGM 115

Query:    80 ASIVLGVWLCINT 92
                + G+ +CI +
Sbjct:   116 VLTITGITVCITS 128


>UNIPROTKB|A7YW81 [details] [associations]
            symbol:TMEM234 "Transmembrane protein 234" species:9913
            "Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
            GO:GO:0016021 EMBL:BC134457 IPI:IPI00708205 RefSeq:NP_001099124.1
            UniGene:Bt.11076 Ensembl:ENSBTAT00000012078 GeneID:100126052
            KEGG:bta:100126052 CTD:56063 eggNOG:NOG320738
            GeneTree:ENSGT00390000013398 HOVERGEN:HBG057419 InParanoid:A7YW81
            OMA:KCKREAS OrthoDB:EOG44F6BR NextBio:20788936 InterPro:IPR018908
            Pfam:PF10639 Uniprot:A7YW81
        Length = 140

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 25/94 (26%), Positives = 43/94 (45%)

Query:     1 LHQKLFAS--LKNWLALLVIWQYTVPFLLNLSASATFFAILSHTPISLAVPVTNXXXXXX 58
             +H++ +A   L+    L +  +Y +PF LN   S  ++  L+ T ++LAVP++N      
Sbjct:    35 VHERTWARQLLQEMKTLFLNPEYLMPFSLNQCGSLLYYLTLASTDLTLAVPISNSLAIIF 94

Query:    59 XXXXXXXXXERTRVGFSLLGMASIVLGVWLCINT 92
                      E      +  GM   V G+ LCI +
Sbjct:    95 TLIVGKVLGEDIGGKRAFAGMVLTVAGITLCITS 128


>ASPGD|ASPL0000072949 [details] [associations]
            symbol:AN4565 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] EMBL:BN001303 EMBL:AACD01000078 InterPro:IPR018908
            Pfam:PF10639 RefSeq:XP_662169.1 EnsemblFungi:CADANIAT00005873
            GeneID:2872364 KEGG:ani:AN4565.2 eggNOG:NOG272354
            HOGENOM:HOG000184973 OMA:WGFTTPF OrthoDB:EOG4P8JTF Uniprot:Q5B4G5
        Length = 205

 Score = 93 (37.8 bits), Expect = 0.00024, P = 0.00024
 Identities = 19/72 (26%), Positives = 35/72 (48%)

Query:    21 YTVPFLLNLSASATFFAILSHTPISLAVPVTNXXXXXXXXXXXXXXXERTRVGFSLLGMA 80
             Y+VP ++NL+ S  FF ++    +SL VP+ N                +     + LGMA
Sbjct:   132 YSVPLIINLTGSVWFFLLVGKHELSLTVPLANSSAFLFTVLGEWYVERKVIARETWLGMA 191

Query:    81 SIVLGVWLCINT 92
              ++ G+ +C+ +
Sbjct:   192 LVLGGIAICVQS 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.137   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        77   0.00091  102 3  11 22  0.43    28
                                                     29  0.50    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  544 (58 KB)
  Total size of DFA:  103 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.25u 0.09s 7.34t   Elapsed:  00:00:01
  Total cpu time:  7.25u 0.09s 7.34t   Elapsed:  00:00:01
  Start:  Thu May  9 22:15:15 2013   End:  Thu May  9 22:15:16 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
