Query 046751
Match_columns 155
No_of_seqs 141 out of 1171
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 06:44:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 4.1E-33 1.4E-37 233.4 11.9 125 1-128 117-267 (301)
2 2yb1_A Amidohydrolase; HET: AM 99.9 9E-28 3.1E-32 198.5 12.1 130 2-133 107-263 (292)
3 3e38_A Two-domain protein cont 99.2 2.8E-11 9.7E-16 102.6 9.0 80 59-138 117-218 (343)
4 1m65_A Hypothetical protein YC 99.1 1.9E-10 6.5E-15 90.6 6.8 69 60-130 113-200 (245)
5 2wje_A CPS4B, tyrosine-protein 99.0 1.5E-10 5E-15 92.6 4.6 74 60-134 121-215 (247)
6 2anu_A Hypothetical protein TM 98.9 1.9E-09 6.3E-14 86.5 5.5 80 59-139 132-222 (255)
7 2yxo_A Histidinol phosphatase; 98.9 1.6E-09 5.3E-14 86.2 4.4 73 61-135 137-237 (267)
8 3qy7_A Tyrosine-protein phosph 98.8 1.6E-09 5.5E-14 88.3 3.2 74 59-133 116-205 (262)
9 2w9m_A Polymerase X; SAXS, DNA 97.9 1.5E-05 5E-10 71.3 6.6 74 62-142 440-532 (578)
10 3b0x_A DNA polymerase beta fam 97.1 0.00065 2.2E-08 60.5 6.4 76 62-143 452-546 (575)
11 3dcp_A Histidinol-phosphatase; 95.3 0.038 1.3E-06 44.9 6.6 72 63-135 162-271 (283)
12 1v77_A PH1877P, hypothetical p 91.6 0.16 5.6E-06 39.3 3.9 69 60-131 85-177 (212)
13 4gbu_A NADPH dehydrogenase 1; 74.8 5.2 0.00018 33.7 5.8 24 59-82 96-121 (400)
14 1z41_A YQJM, probable NADH-dep 64.2 15 0.00052 29.9 6.3 23 60-82 84-108 (338)
15 4ab4_A Xenobiotic reductase B; 63.5 15 0.00051 30.6 6.2 24 59-82 79-104 (362)
16 3gka_A N-ethylmaleimide reduct 62.7 16 0.00054 30.5 6.2 24 59-82 87-112 (361)
17 3gr7_A NADPH dehydrogenase; fl 62.0 14 0.00047 30.4 5.7 24 59-82 83-108 (340)
18 3l5a_A NADH/flavin oxidoreduct 61.3 13 0.00046 31.6 5.6 24 59-82 104-129 (419)
19 3k30_A Histamine dehydrogenase 60.9 16 0.00053 32.5 6.2 23 60-82 90-114 (690)
20 1icp_A OPR1, 12-oxophytodienoa 60.5 18 0.00061 30.2 6.2 22 60-81 92-115 (376)
21 3kru_A NADH:flavin oxidoreduct 60.1 19 0.00065 29.7 6.2 24 59-82 81-106 (343)
22 3tjl_A NADPH dehydrogenase; OL 56.2 26 0.00089 29.8 6.5 23 60-82 93-117 (407)
23 3fij_A LIN1909 protein; 11172J 55.5 20 0.00067 27.9 5.3 35 62-101 31-65 (254)
24 4a3u_A NCR, NADH\:flavin oxido 55.3 18 0.00062 29.8 5.3 24 59-82 79-104 (358)
25 3ngf_A AP endonuclease, family 54.7 17 0.00058 27.7 4.8 34 86-119 25-66 (269)
26 3l5l_A Xenobiotic reductase A; 53.9 21 0.0007 29.5 5.4 23 59-81 80-104 (363)
27 1ps9_A 2,4-dienoyl-COA reducta 52.8 21 0.00071 31.5 5.6 23 60-82 82-106 (671)
28 3kts_A Glycerol uptake operon 52.3 29 0.00099 26.6 5.7 42 59-101 41-86 (192)
29 1o94_A Tmadh, trimethylamine d 52.1 22 0.00074 31.9 5.7 22 60-81 85-108 (729)
30 3hgj_A Chromate reductase; TIM 51.4 25 0.00086 28.8 5.6 23 59-81 81-105 (349)
31 1vkf_A Glycerol uptake operon 47.3 29 0.001 26.6 4.9 42 59-101 43-87 (188)
32 1u83_A Phosphosulfolactate syn 44.7 42 0.0014 27.3 5.7 51 59-109 80-135 (276)
33 3f4w_A Putative hexulose 6 pho 44.5 21 0.00072 26.4 3.7 12 90-101 70-81 (211)
34 3kws_A Putative sugar isomeras 44.0 43 0.0015 25.5 5.6 34 86-119 40-82 (287)
35 3ks6_A Glycerophosphoryl diest 42.6 23 0.00079 27.3 3.8 41 62-106 194-234 (250)
36 3l12_A Putative glycerophospho 40.7 27 0.00093 27.8 4.1 41 62-106 258-298 (313)
37 3eyy_A Putative iron uptake re 40.5 34 0.0012 24.3 4.2 39 13-52 5-43 (145)
38 1xx1_A Smase I, sphingomyelina 38.6 22 0.00074 27.8 3.1 27 75-104 8-34 (285)
39 1k77_A EC1530, hypothetical pr 37.5 22 0.00075 26.6 2.9 34 86-119 17-58 (260)
40 2hsa_B 12-oxophytodienoate red 36.9 93 0.0032 26.0 6.9 22 60-81 94-117 (402)
41 1qwg_A PSL synthase;, (2R)-pho 36.5 47 0.0016 26.6 4.8 49 61-109 57-110 (251)
42 3ch0_A Glycerophosphodiester p 34.3 61 0.0021 24.9 5.1 41 62-106 226-266 (272)
43 1vyr_A Pentaerythritol tetrani 34.3 84 0.0029 25.8 6.2 22 60-81 82-105 (364)
44 2r14_A Morphinone reductase; H 33.3 84 0.0029 26.0 6.1 22 60-81 86-109 (377)
45 3vni_A Xylose isomerase domain 32.6 36 0.0012 25.9 3.4 34 86-119 19-65 (294)
46 3qvq_A Phosphodiesterase OLEI0 32.1 43 0.0015 25.7 3.8 41 62-106 200-240 (252)
47 2gou_A Oxidoreductase, FMN-bin 31.8 71 0.0024 26.3 5.3 22 60-81 82-105 (365)
48 2pz0_A Glycerophosphoryl diest 30.7 66 0.0023 24.6 4.7 41 62-106 201-241 (252)
49 2eja_A URO-D, UPD, uroporphyri 30.3 24 0.00082 28.3 2.1 61 59-123 217-281 (338)
50 2zvr_A Uncharacterized protein 29.8 42 0.0014 25.7 3.4 31 87-117 44-84 (290)
51 2otd_A Glycerophosphodiester p 29.6 68 0.0023 24.3 4.6 42 62-107 197-238 (247)
52 3lmz_A Putative sugar isomeras 29.3 57 0.0019 24.4 4.0 21 86-106 32-52 (257)
53 3p6l_A Sugar phosphate isomera 29.1 64 0.0022 24.1 4.3 21 85-105 23-43 (262)
54 2oog_A Glycerophosphoryl diest 28.8 72 0.0025 24.9 4.7 41 62-106 231-271 (287)
55 3tha_A Tryptophan synthase alp 28.3 34 0.0012 27.2 2.7 55 45-101 61-120 (252)
56 3iwp_A Copper homeostasis prot 27.5 73 0.0025 25.9 4.5 45 59-103 139-185 (287)
57 3dx5_A Uncharacterized protein 27.4 76 0.0026 23.9 4.5 20 86-105 17-36 (286)
58 3no3_A Glycerophosphodiester p 27.3 43 0.0015 25.6 3.0 40 63-106 187-226 (238)
59 4e38_A Keto-hydroxyglutarate-a 26.8 1.1E+02 0.0039 23.8 5.4 48 61-109 24-71 (232)
60 3tva_A Xylose isomerase domain 26.2 51 0.0018 25.0 3.3 34 87-120 24-70 (290)
61 2qhq_A Unknown function protei 25.8 22 0.00075 25.7 1.0 44 57-102 73-116 (125)
62 1vd6_A Glycerophosphoryl diest 25.5 69 0.0023 24.0 3.9 41 62-106 176-216 (224)
63 2o55_A Putative glycerophospho 24.1 1.5E+02 0.0051 22.5 5.6 44 62-106 202-246 (258)
64 2ekc_A AQ_1548, tryptophan syn 23.8 1.5E+02 0.0053 22.9 5.8 48 62-109 5-56 (262)
65 3mz2_A Glycerophosphoryl diest 23.2 1.1E+02 0.0038 24.2 4.9 46 62-107 218-269 (292)
66 3ktc_A Xylose isomerase; putat 23.0 51 0.0018 26.0 2.8 23 86-108 35-58 (333)
67 3rlg_A Sphingomyelin phosphodi 22.2 57 0.002 26.8 2.9 45 61-106 227-271 (302)
68 3a24_A Alpha-galactosidase; gl 22.1 1.5E+02 0.0051 26.7 5.9 67 59-129 347-429 (641)
69 2q02_A Putative cytoplasmic pr 21.7 1.2E+02 0.0041 22.4 4.6 18 87-104 22-39 (272)
70 2xvc_A ESCRT-III, SSO0910; cel 21.7 70 0.0024 20.1 2.6 44 59-102 10-58 (59)
71 1wdc_C Scallop myosin; calcium 21.5 1.4E+02 0.0047 19.8 4.5 69 4-72 36-114 (156)
72 2zuv_A Lacto-N-biose phosphory 21.4 12 0.0004 34.6 -1.5 40 59-101 291-333 (759)
73 1o1z_A GDPD, glycerophosphodie 21.1 97 0.0033 23.5 4.0 36 69-104 8-47 (234)
74 2kxe_A DNA polymerase II small 21.0 1.2E+02 0.0042 19.5 3.8 43 32-76 7-52 (75)
75 1ydy_A Glycerophosphoryl diest 20.8 70 0.0024 25.9 3.2 42 62-106 297-348 (356)
76 4ets_A Ferric uptake regulatio 20.6 1.3E+02 0.0043 21.7 4.3 33 59-98 49-84 (162)
77 3qc0_A Sugar isomerase; TIM ba 20.6 59 0.002 24.2 2.6 21 86-106 20-40 (275)
78 3t7v_A Methylornithine synthas 20.6 62 0.0021 25.8 2.8 38 62-101 129-166 (350)
79 1wzu_A Quinolinate synthetase 20.2 71 0.0024 26.1 3.1 24 59-82 176-199 (300)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=4.1e-33 Score=233.39 Aligned_cols=125 Identities=26% Similarity=0.410 Sum_probs=111.7
Q ss_pred ChHHHHhCCCCCCHHHHHHHhCCC--CCCCHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC---------CCHHHHHHHHH
Q 046751 1 MILKLNKLKLPLKWENVAKIAGKG--VAPGRLHVARAMVEAGHVENLKHAFADISMMGDM---------HTPQVVVELIH 69 (155)
Q Consensus 1 ii~~L~~~G~~I~~e~v~~~a~~~--~~i~r~Hia~~Lv~~g~~~~~~~af~~~~~l~~g---------~~~~e~I~~I~ 69 (155)
|+++|++. ++|+||++.+.++++ .++||||||++|+++||+++++++|++| |++| ++++|+|++|+
T Consensus 117 i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~~~~~~aF~~~--l~~g~~~yV~~~~~~~~eaI~~I~ 193 (301)
T 3o0f_A 117 MVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVYETRSDAFADA--VSAKSKYYIPTPSPSTHEVIAAVK 193 (301)
T ss_dssp HHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSCSSHHHHHTTT--TSTTSTTCCCCCCCBHHHHHHHHH
T ss_pred HHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHH--HcCCCccccCccCCCHHHHHHHHH
Confidence 57899999 999999998876432 3699999999999999999999999999 9988 79999999999
Q ss_pred hcCCeEEecCCCCcC-----ChHHHHHHHHHcCCCEEEEecCCCCc----------ccccceeeecCCCCCCCc
Q 046751 70 RTSGLAVLAHPWALK-----NPAAIIRKLKDVGLHRLEVYRSDGKL----------VGVIFTLQDGSHYESKKE 128 (155)
Q Consensus 70 ~aGGv~VlAHP~~~~-----~~~~~l~~l~~~GldGIEv~~~~~~~----------~~~~L~~tgGSD~H~~~~ 128 (155)
++||++|||||+++. ...+++.+|++.|+|||||+|++|++ .++||++|||||||++..
T Consensus 194 ~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~gL~~tgGSD~Hg~~~ 267 (301)
T 3o0f_A 194 GAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHDLLVTGGSDWHGKGK 267 (301)
T ss_dssp HTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHTCEEEECCCBCGGGS
T ss_pred HCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEEcCCCCCCC
Confidence 999999999997642 24678999999999999999999986 379999999999999753
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=99.95 E-value=9e-28 Score=198.46 Aligned_cols=130 Identities=18% Similarity=0.245 Sum_probs=113.9
Q ss_pred hHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC---------CCHHHHHHHHHhcC
Q 046751 2 ILKLNKLKLPLKWENVAKIAGKGVAPGRLHVARAMVEAGHVENLKHAFADISMMGDM---------HTPQVVVELIHRTS 72 (155)
Q Consensus 2 i~~L~~~G~~I~~e~v~~~a~~~~~i~r~Hia~~Lv~~g~~~~~~~af~~~~~l~~g---------~~~~e~I~~I~~aG 72 (155)
+++|++.|++++++++.+.+.++..+||||||++|+++|++++..++|++| |++| ++++++|++|+++|
T Consensus 107 ~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~~~f~~y--l~~~~~~~v~~~~~~~~~~i~~i~~~G 184 (292)
T 2yb1_A 107 GASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMRTVFRKY--LTPGKPGYVSHQWASLEDAVGWIVGAG 184 (292)
T ss_dssp HHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHHHHHHHS--SSTTSTTCCCCCCBCHHHHHHHHHHTT
T ss_pred HHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHHHHHHHH--HccCCceeccCCCCCHHHHHHHHHHcC
Confidence 567888999999999987765444789999999999999999999999999 9866 68999999999999
Q ss_pred CeEEecCCCCcCC----hHHHHHHHHHcCCCEEEEecCCCCc----------ccccceeeecCCCCCCC----ccccee
Q 046751 73 GLAVLAHPWALKN----PAAIIRKLKDVGLHRLEVYRSDGKL----------VGVIFTLQDGSHYESKK----EIESIV 133 (155)
Q Consensus 73 Gv~VlAHP~~~~~----~~~~l~~l~~~GldGIEv~~~~~~~----------~~~~L~~tgGSD~H~~~----~~~~~~ 133 (155)
|++|+|||+++.. ..++++++++.|++||||+++.++. .++|+++|+|||||++. .+|+..
T Consensus 185 g~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~~~~~a~~~gl~~t~GSDaH~~~~~~~~lG~~~ 263 (292)
T 2yb1_A 185 GMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHKFALHADRHGLYASSGSDFHAPGEGGRDVGHTE 263 (292)
T ss_dssp CEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHHHHHHTCEEEEECCBCSTTC---CTTCCC
T ss_pred CEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEeeCCCCcCCCCCcCCCCC
Confidence 9999999997652 2467888889999999999999984 37999999999999999 777653
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.22 E-value=2.8e-11 Score=102.56 Aligned_cols=80 Identities=13% Similarity=0.052 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCcCC-h-----HHHHHHHH-HcCCCEEEEecCCC-Cc------ccccceeeecCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWALKN-P-----AAIIRKLK-DVGLHRLEVYRSDG-KL------VGVIFTLQDGSHYE 124 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~~~-~-----~~~l~~l~-~~GldGIEv~~~~~-~~------~~~~L~~tgGSD~H 124 (155)
.+++++++.+++.||++|+|||++... . ...++++. ..++|||||||+.. +. +.++|.++||||+|
T Consensus 117 ~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~~~e~l~~~~iDaIEv~N~~~~n~~A~~la~~~~l~~~~GSDaH 196 (343)
T 3e38_A 117 KDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPEHTALYQEGCMHGIEVANGHLYMPEAIQWCLDKNLTMIGTSDIH 196 (343)
T ss_dssp SSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHHHHHHHHTTCCSEEEEEETTEECTHHHHHHHHHTCEEEEECCBC
T ss_pred cCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccchHHHhcccCccEEEEcCCCCccHHHHHHHhhCCCceEeECCCC
Confidence 678999999999999999999997431 0 01134444 36899999999974 22 47899999999999
Q ss_pred CC--------CcccceeeEeee
Q 046751 125 SK--------KEIESIVLEILC 138 (155)
Q Consensus 125 ~~--------~~~~~~~~~~~~ 138 (155)
.+ ..+|+.+|.|.+
T Consensus 197 ~~~~~~y~~~~~iGr~~T~v~~ 218 (343)
T 3e38_A 197 QPIQTDYDFEKGEHRTMTFVFA 218 (343)
T ss_dssp SCHHHHCCGGGTCCCCEEEEEE
T ss_pred CCcccccccccccccceEEEec
Confidence 99 578999999965
No 4
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.07 E-value=1.9e-10 Score=90.60 Aligned_cols=69 Identities=16% Similarity=0.100 Sum_probs=56.4
Q ss_pred CHHHHHHHHHhcCCeEEecCCCCcC---ChHHHHHHHHHcCCCEEEEecCCCC--------c--------ccccceeeec
Q 046751 60 TPQVVVELIHRTSGLAVLAHPWALK---NPAAIIRKLKDVGLHRLEVYRSDGK--------L--------VGVIFTLQDG 120 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~VlAHP~~~~---~~~~~l~~l~~~GldGIEv~~~~~~--------~--------~~~~L~~tgG 120 (155)
.++++++.++ +||++|+|||.++. ...++++.+++.| ++||+++++.. + .++|+.+|+|
T Consensus 113 ~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~g 190 (245)
T 1m65_A 113 NTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNSSFLHSRKGSEDNCREVAAAVRDAGGWVALG 190 (245)
T ss_dssp HHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETTC----------CHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECCCCcccCCCCCCchHHHHHHHHHcCCEEEEE
Confidence 4577888888 99999999998743 2356788899999 79999999873 1 3789999999
Q ss_pred CCCCCCCccc
Q 046751 121 SHYESKKEIE 130 (155)
Q Consensus 121 SD~H~~~~~~ 130 (155)
||+|++.+++
T Consensus 191 SDaH~~~~~g 200 (245)
T 1m65_A 191 SDSHTAFTMG 200 (245)
T ss_dssp CCBSSGGGTT
T ss_pred CCCCChHHHh
Confidence 9999998887
No 5
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.03 E-value=1.5e-10 Score=92.56 Aligned_cols=74 Identities=15% Similarity=0.012 Sum_probs=60.9
Q ss_pred CHHHHHHHHHhcCCeEEecCCCCcCC---hHHHHHHHHHcCCCEEEEecCCC--C-------c---------ccccceee
Q 046751 60 TPQVVVELIHRTSGLAVLAHPWALKN---PAAIIRKLKDVGLHRLEVYRSDG--K-------L---------VGVIFTLQ 118 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~VlAHP~~~~~---~~~~l~~l~~~GldGIEv~~~~~--~-------~---------~~~~L~~t 118 (155)
.+.+++..++++|+++|+|||.++.. ..+.+..+++.|+. +|+.+++. + + .++|+++|
T Consensus 121 ~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~-lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~ 199 (247)
T 2wje_A 121 DIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY-TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHV 199 (247)
T ss_dssp HHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE-EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE-EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEE
Confidence 36789999999999999999987541 35788999999997 99988765 3 2 27899999
Q ss_pred ecCCCCCCCcccceee
Q 046751 119 DGSHYESKKEIESIVL 134 (155)
Q Consensus 119 gGSD~H~~~~~~~~~~ 134 (155)
.|||+|++..++..+.
T Consensus 200 ~GSDaH~~~~~~~~~~ 215 (247)
T 2wje_A 200 IASDMHNLDGRPPHMA 215 (247)
T ss_dssp EECCBCCSSSSCCCHH
T ss_pred EEeCCCCCcccChhHH
Confidence 9999999988876543
No 6
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=98.87 E-value=1.9e-09 Score=86.51 Aligned_cols=80 Identities=15% Similarity=0.165 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCcCChHH-----H---HHHHHHcCCCEEEEecCCCCc---ccccceeeecCCCCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWALKNPAA-----I---IRKLKDVGLHRLEVYRSDGKL---VGVIFTLQDGSHYESKK 127 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~~~~~~-----~---l~~l~~~GldGIEv~~~~~~~---~~~~L~~tgGSD~H~~~ 127 (155)
..++++++.+++.|+++|+|||.++..... . .+.+. ..+++||++++.... +++++.+|+|||+|.+.
T Consensus 132 ~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~~~~~~~~~~~~~-~~~~aiEin~~~~~~~~~~~~g~~~~~gSDAH~~~ 210 (255)
T 2anu_A 132 LPVEEIVEKLKEQNALVIAAHPDRKKQDEEHLSWYLWANMERFK-DTFDAWEIANRDDLFNSVGVKKYRYVANSDFHELW 210 (255)
T ss_dssp SCHHHHHHHHHHTTCEEEECCCCTTC-----CCCHHHHSTTTTT-TTCSEEEEEETTEECHHHHHTTCCEEEECCBCSGG
T ss_pred CCHHHHHHHHHHCCCeEEEeCCCccccccccccccccchhhhhh-ccCcEEEEcCCCchhhHHHHcCCceEeccCCCCCc
Confidence 478999999999999999999997542111 0 11222 358999999976322 46899999999999999
Q ss_pred cccceeeEeeeh
Q 046751 128 EIESIVLEILCS 139 (155)
Q Consensus 128 ~~~~~~~~~~~~ 139 (155)
++|+..+.+.++
T Consensus 211 ~ig~~~~~~~~~ 222 (255)
T 2anu_A 211 HVYSWKTLVKSE 222 (255)
T ss_dssp GGSSEEEEEEEC
T ss_pred ccCCceEEEecC
Confidence 999998888654
No 7
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=98.85 E-value=1.6e-09 Score=86.21 Aligned_cols=73 Identities=18% Similarity=0.098 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcCCeEEecCCCCcC---C----------hHHHHHHHHHcCCCEEEEecCCCCc---------------cc
Q 046751 61 PQVVVELIHRTSGLAVLAHPWALK---N----------PAAIIRKLKDVGLHRLEVYRSDGKL---------------VG 112 (155)
Q Consensus 61 ~~e~I~~I~~aGGv~VlAHP~~~~---~----------~~~~l~~l~~~GldGIEv~~~~~~~---------------~~ 112 (155)
.+++++++++ |+++|+|||.+.. . ..++++.+++.| .+||+.++..+. .+
T Consensus 137 ~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~ 214 (267)
T 2yxo_A 137 FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARE 214 (267)
T ss_dssp HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCHHHHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCEEeCccHHHHhCCCCChHHHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHH
Confidence 3667888886 9999999998632 1 235677888888 699998875421 37
Q ss_pred ccceeeecCCCCCCCcccceeeE
Q 046751 113 VIFTLQDGSHYESKKEIESIVLE 135 (155)
Q Consensus 113 ~~L~~tgGSD~H~~~~~~~~~~~ 135 (155)
+|+.+|+|||+|++..++..+.+
T Consensus 215 ~g~~~~~gSDaH~~~~~~~~~~~ 237 (267)
T 2yxo_A 215 LGIGLVLGSDAHRPEEVGFAFPE 237 (267)
T ss_dssp HTCCEEEECCBSSGGGTTTTHHH
T ss_pred cCCCEEEecCCCCHHHHHhhHHH
Confidence 89999999999999999976543
No 8
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=98.81 E-value=1.6e-09 Score=88.28 Aligned_cols=74 Identities=12% Similarity=0.047 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCcCC---hHHHHHHHHHcCCCEEEEecCCCCc-------------ccccceeeecCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWALKN---PAAIIRKLKDVGLHRLEVYRSDGKL-------------VGVIFTLQDGSH 122 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~~~---~~~~l~~l~~~GldGIEv~~~~~~~-------------~~~~L~~tgGSD 122 (155)
..+.++|..+.++|+++|+|||.++.. ..+.+.++++.|. ++|+..++.+. .++|++.|.|||
T Consensus 116 ~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~-~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSD 194 (262)
T 3qy7_A 116 RYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA-ASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASD 194 (262)
T ss_dssp TTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-EEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-EEEEECCccCcccchHHHHHHHHHHhCCCeEEEEcc
Confidence 467999999999999999999997641 1357889999995 89999765431 268999999999
Q ss_pred CCCCCccccee
Q 046751 123 YESKKEIESIV 133 (155)
Q Consensus 123 ~H~~~~~~~~~ 133 (155)
+|++...+..+
T Consensus 195 aH~~~~r~~~~ 205 (262)
T 3qy7_A 195 AHNVKTRNFHT 205 (262)
T ss_dssp BCSSSSSCCCH
T ss_pred CCCCCCCCchH
Confidence 99998766543
No 9
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=97.91 E-value=1.5e-05 Score=71.30 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=54.8
Q ss_pred HHHHHHHHhcCCeEEecCCCCc---------CChHHHHHHHHHcCCCEEEEecCCCCc----------ccccceeeecCC
Q 046751 62 QVVVELIHRTSGLAVLAHPWAL---------KNPAAIIRKLKDVGLHRLEVYRSDGKL----------VGVIFTLQDGSH 122 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~---------~~~~~~l~~l~~~GldGIEv~~~~~~~----------~~~~L~~tgGSD 122 (155)
+..+++++ .|+++|+|||... ...+++++.+++.| .+||+.++..+. .+ |+.+|.|||
T Consensus 440 ~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g-~~lEIN~~~~r~~~~~~~~~~a~e-Gl~i~igSD 516 (578)
T 2w9m_A 440 ERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANG-TVVEINANAARLDLDWREALRWRE-RLKFAINTD 516 (578)
T ss_dssp HHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECSTTTCBSCHHHHHHHTT-TCCEEEECC
T ss_pred HHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCC-CEEEEECCCCCcCcHHHHHHHHHc-CCEEEEECC
Confidence 44555555 5999999999741 12346788888887 599999887542 37 999999999
Q ss_pred CCCCCcccceeeEeeehhhh
Q 046751 123 YESKKEIESIVLEILCSIIY 142 (155)
Q Consensus 123 ~H~~~~~~~~~~~~~~~~~~ 142 (155)
+|.+..++. |+.++.+
T Consensus 517 AH~~~~~~~----~~~~~~~ 532 (578)
T 2w9m_A 517 AHVPGGLRD----ARYGVMQ 532 (578)
T ss_dssp CSSGGGGGG----HHHHHHH
T ss_pred CCChhhcch----HHHHHHH
Confidence 999999885 4444443
No 10
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=97.13 E-value=0.00065 Score=60.48 Aligned_cols=76 Identities=17% Similarity=0.223 Sum_probs=53.6
Q ss_pred HHHHHHHHhcCCeEEecCCCC-c-----C---ChHHHHHHHHHcCCCEEEEecCCCCc----------ccccceeeecCC
Q 046751 62 QVVVELIHRTSGLAVLAHPWA-L-----K---NPAAIIRKLKDVGLHRLEVYRSDGKL----------VGVIFTLQDGSH 122 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~-~-----~---~~~~~l~~l~~~GldGIEv~~~~~~~----------~~~~L~~tgGSD 122 (155)
++.+++++ .|+++|+|||.. + . ...++++.+++.| .++|+-.+.... .++|+.++.|||
T Consensus 452 ~~l~~~i~-~g~v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~g-~~lEIN~~~~~~~~~~~~~~~a~e~G~~~vigSD 529 (575)
T 3b0x_A 452 KRLLKALE-NPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEKG-VAVEIDGYYDRMDLPDDLARMAYGMGLWISLSTD 529 (575)
T ss_dssp HHHHHHTT-CTTCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECCTTTCBSCHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHh-cCCCeEEECCchhhcCCCcCchHHHHHHHHHHHHcC-CEEEEeCCCCcCCchHHHHHHHHHcCCeEEEECC
Confidence 44455554 799999999972 1 1 2345677777766 699996554331 378999999999
Q ss_pred CCCCCcccceeeEeeehhhhh
Q 046751 123 YESKKEIESIVLEILCSIIYL 143 (155)
Q Consensus 123 ~H~~~~~~~~~~~~~~~~~~~ 143 (155)
+|.+..++ + |..++.++
T Consensus 530 AH~~~~~~-~---~~~~~~~~ 546 (575)
T 3b0x_A 530 AHQTDHLR-F---MELAVGTA 546 (575)
T ss_dssp BSSGGGGG-G---HHHHHHHH
T ss_pred CCChHHhh-h---HHHHHHHH
Confidence 99999987 3 55555554
No 11
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=95.28 E-value=0.038 Score=44.86 Aligned_cols=72 Identities=13% Similarity=-0.015 Sum_probs=47.6
Q ss_pred HHHHHHHhc-C--CeEEecCCCCc---C---------C-------hHHHHHHHHHcCCCEEEEecCCCC----------c
Q 046751 63 VVVELIHRT-S--GLAVLAHPWAL---K---------N-------PAAIIRKLKDVGLHRLEVYRSDGK----------L 110 (155)
Q Consensus 63 e~I~~I~~a-G--Gv~VlAHP~~~---~---------~-------~~~~l~~l~~~GldGIEv~~~~~~----------~ 110 (155)
..+++|+.. | -+-|++||... . . .+++++.+++.| -++|+-.+..+ .
T Consensus 162 ~~~~~i~~~l~~~~~dilgH~Dlir~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~g-~~lEiN~~~l~~~~~~~~yp~~ 240 (283)
T 3dcp_A 162 GVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRD-YELDFNTAGLFKPLCGETYPPK 240 (283)
T ss_dssp HHHHHHHCCCCTTCCSEECCTTGGGTTGGGGTCCGGGCCHHHHHHHHHHHHHHHHHT-CEEEEECGGGGSTTCCSCBSCH
T ss_pred HHHHHHHhCccccCCCEEECCcHHHHcCcccccccccccHHHHHHHHHHHHHHHHcC-CEEEEechHhcCCCCCCcCCHH
Confidence 345555542 1 33699999731 1 1 234566666665 47898875421 1
Q ss_pred ------ccccceeeecCCCCCCCcccceeeE
Q 046751 111 ------VGVIFTLQDGSHYESKKEIESIVLE 135 (155)
Q Consensus 111 ------~~~~L~~tgGSD~H~~~~~~~~~~~ 135 (155)
.++|..++-|||+|.+..+|.++-+
T Consensus 241 ~~~~~~~~~g~~i~igSDAH~~~~vg~~~~~ 271 (283)
T 3dcp_A 241 KIVTLASELQIPFVYGSDSHGVQDIGRGYST 271 (283)
T ss_dssp HHHHHHHHTTCCEEEECCBSSGGGTTTTHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCHHHHhChHHH
Confidence 3789999999999999999987643
No 12
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=91.57 E-value=0.16 Score=39.29 Aligned_cols=69 Identities=12% Similarity=0.083 Sum_probs=48.5
Q ss_pred CHHHHHHHHHhcCCeEEecCCCCcC----ChHHHHHHHHHcCCCEEEEecCCC---Cc-----------------ccccc
Q 046751 60 TPQVVVELIHRTSGLAVLAHPWALK----NPAAIIRKLKDVGLHRLEVYRSDG---KL-----------------VGVIF 115 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~VlAHP~~~~----~~~~~l~~l~~~GldGIEv~~~~~---~~-----------------~~~~L 115 (155)
+.+..-.++. . .+=+++||+..+ ....++...++.|+ .+|+-++.. +. +++|.
T Consensus 85 ~~~~n~~a~~-~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv-~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~ 161 (212)
T 1v77_A 85 DLRVIRYSIE-K-GVDAIISPWVNRKDPGIDHVLAKLMVKKNV-ALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKV 161 (212)
T ss_dssp CHHHHHHHHH-T-TCSEEECTTTTSSSCSCCHHHHHHHHHHTC-EEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHh-C-CCCEEecccccccCCCCCHHHHHHHHHCCe-EEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCC
Confidence 4443334444 4 799999998532 12466666777764 899988763 10 37899
Q ss_pred eeeecCCCCCCCcccc
Q 046751 116 TLQDGSHYESKKEIES 131 (155)
Q Consensus 116 ~~tgGSD~H~~~~~~~ 131 (155)
.++-|||+|.+.+++.
T Consensus 162 ~ivisSDAh~~~~v~~ 177 (212)
T 1v77_A 162 RRFLTSSAQEKWDVRY 177 (212)
T ss_dssp CEEEECCCSSGGGCCC
T ss_pred CEEEeCCCCChhhcCC
Confidence 9999999999999844
No 13
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=74.81 E-value=5.2 Score=33.69 Aligned_cols=24 Identities=17% Similarity=-0.010 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHhcCCeEE--ecCCCC
Q 046751 59 HTPQVVVELIHRTSGLAV--LAHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~V--lAHP~~ 82 (155)
..+..+++.||+.|+.++ |.|+++
T Consensus 96 ~~~k~l~davH~~G~~i~~QL~H~Gr 121 (400)
T 4gbu_A 96 VEWTKIFNAIHEKKSFVWVQLAVLGW 121 (400)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHHhcCCceEEeeeecCc
Confidence 445678999999999877 477764
No 14
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=64.22 E-value=15 Score=29.90 Aligned_cols=23 Identities=17% Similarity=0.057 Sum_probs=16.5
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPWA 82 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~~ 82 (155)
....+.+.+|+.|+.++ |.|+++
T Consensus 84 ~~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 84 GFAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCc
Confidence 35567889999998644 678653
No 15
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=63.54 E-value=15 Score=30.64 Aligned_cols=24 Identities=21% Similarity=0.135 Sum_probs=17.4
Q ss_pred CCHHHHHHHHHhcCCeEE--ecCCCC
Q 046751 59 HTPQVVVELIHRTSGLAV--LAHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~V--lAHP~~ 82 (155)
..+..+++.||+.|+.++ |.|+++
T Consensus 79 ~~~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 79 RGWNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHHhcCCEEEEEeccCcc
Confidence 345677899999999866 466553
No 16
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=62.74 E-value=16 Score=30.48 Aligned_cols=24 Identities=21% Similarity=0.220 Sum_probs=17.4
Q ss_pred CCHHHHHHHHHhcCCeEEe--cCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVL--AHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~Vl--AHP~~ 82 (155)
..+..+++.||+.|+.+++ .|+++
T Consensus 87 ~~~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 87 DGWRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHHhcCCeEEEeeccCCc
Confidence 3456778999999997664 66553
No 17
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=62.04 E-value=14 Score=30.38 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=17.9
Q ss_pred CCHHHHHHHHHhcCCeEEe--cCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVL--AHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~Vl--AHP~~ 82 (155)
..+..+++.||+.|+.+++ .|+++
T Consensus 83 ~~~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 83 AGLRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHHhCCCeEEEEeccCCC
Confidence 4456789999999998764 66553
No 18
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=61.31 E-value=13 Score=31.55 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHhcCCeEEe--cCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVL--AHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~Vl--AHP~~ 82 (155)
..+..+.+.||+.|+.+++ .|+++
T Consensus 104 ~~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 104 PGLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHHhcCCEEEEEeccCCC
Confidence 4567789999999998764 67764
No 19
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.89 E-value=16 Score=32.51 Aligned_cols=23 Identities=35% Similarity=0.417 Sum_probs=16.9
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPWA 82 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~~ 82 (155)
.+....+.+|+.|+.++ |.|+++
T Consensus 90 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 90 ALKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEccCCcc
Confidence 35678899999998765 477543
No 20
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=60.54 E-value=18 Score=30.16 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=15.8
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPW 81 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~ 81 (155)
.+..+++.+|+.|+.++ |.|++
T Consensus 92 ~~k~l~~avh~~G~~i~~QL~H~G 115 (376)
T 1icp_A 92 AWKPIVDAVHAKGGIFFCQIWHVG 115 (376)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCC
Confidence 34567789999999755 57744
No 21
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=60.09 E-value=19 Score=29.73 Aligned_cols=24 Identities=13% Similarity=0.210 Sum_probs=17.8
Q ss_pred CCHHHHHHHHHhcCCeEEe--cCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVL--AHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~Vl--AHP~~ 82 (155)
..+..+++.||+.|+.+++ .|+++
T Consensus 81 ~~~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 81 KELKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceEeeehhhccC
Confidence 3456789999999998764 66653
No 22
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=56.18 E-value=26 Score=29.80 Aligned_cols=23 Identities=9% Similarity=0.089 Sum_probs=17.0
Q ss_pred CHHHHHHHHHhcCCeEEe--cCCCC
Q 046751 60 TPQVVVELIHRTSGLAVL--AHPWA 82 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~Vl--AHP~~ 82 (155)
.+..+++.||+.|+.+++ .|+++
T Consensus 93 ~~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 93 AWKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 345678999999998664 66553
No 23
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=55.46 E-value=20 Score=27.87 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=24.0
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEE
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRL 101 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGI 101 (155)
.+-++.+.++||.+++-+|.. ..+ ++++++ .+|||
T Consensus 31 ~~~~~~l~~aG~~pv~lp~~~---~~~-~~~~l~-~~DGl 65 (254)
T 3fij_A 31 QRYVDAIQKVGGFPIALPIDD---PST-AVQAIS-LVDGL 65 (254)
T ss_dssp HHHHHHHHHHTCEEEEECCCC---GGG-HHHHHH-TCSEE
T ss_pred HHHHHHHHHCCCEEEEEeCCC---chH-HHHHHh-hCCEE
Confidence 456888999999999876542 123 455444 58888
No 24
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=55.32 E-value=18 Score=29.82 Aligned_cols=24 Identities=21% Similarity=0.214 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHhcCCeEE--ecCCCC
Q 046751 59 HTPQVVVELIHRTSGLAV--LAHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~V--lAHP~~ 82 (155)
..+..+++.||+.|+.++ |.|+++
T Consensus 79 ~~~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 79 EAWLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHHHhcCCceeeccccccc
Confidence 445678999999999876 467664
No 25
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=54.68 E-value=17 Score=27.72 Aligned_cols=34 Identities=12% Similarity=-0.132 Sum_probs=25.4
Q ss_pred hHHHHHHHHHcCCCEEEEecCCCCc--------ccccceeee
Q 046751 86 PAAIIRKLKDVGLHRLEVYRSDGKL--------VGVIFTLQD 119 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~~~~~~--------~~~~L~~tg 119 (155)
..+.++.+++.|+||||...+.... +++||.+++
T Consensus 25 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 25 FLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVL 66 (269)
T ss_dssp HHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEE
Confidence 4678888899999999998764332 367887765
No 26
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=53.87 E-value=21 Score=29.52 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHhcCCeEEe--cCCC
Q 046751 59 HTPQVVVELIHRTSGLAVL--AHPW 81 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~Vl--AHP~ 81 (155)
..+..+++.||+.|+.+++ .|++
T Consensus 80 ~~~~~~~~~vh~~G~~i~~QL~H~G 104 (363)
T 3l5l_A 80 QAFVPVVQAIKAAGSVPGIQIAHAG 104 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCG
T ss_pred HHHHHHHHHHHhcCCEEEEEeccCC
Confidence 3456788999999998664 5544
No 27
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=52.81 E-value=21 Score=31.53 Aligned_cols=23 Identities=17% Similarity=0.341 Sum_probs=16.6
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPWA 82 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~~ 82 (155)
.+....+.+|+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 45667889999998644 678543
No 28
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=52.30 E-value=29 Score=26.61 Aligned_cols=42 Identities=17% Similarity=0.113 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCc---CChHHHHHHHHH-cCCCEE
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWAL---KNPAAIIRKLKD-VGLHRL 101 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~---~~~~~~l~~l~~-~GldGI 101 (155)
.++++.++.+|++|=.+++ ||... ..+...++.|+. .+.|||
T Consensus 41 ~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGI 86 (192)
T 3kts_A 41 AQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGI 86 (192)
T ss_dssp TTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEE
Confidence 7899999999999988777 99742 344566777776 478887
No 29
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=52.12 E-value=22 Score=31.93 Aligned_cols=22 Identities=18% Similarity=0.120 Sum_probs=15.8
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPW 81 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~ 81 (155)
.+....+.+|+.|+.++ |.|++
T Consensus 85 ~~~~~~~~vh~~g~~i~~Ql~h~G 108 (729)
T 1o94_A 85 NLKAMTDEVHKYGALAGVELWYGG 108 (729)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECCG
T ss_pred HHHHHHHHHHhCCCeEEEEecCCC
Confidence 34567788999998654 67854
No 30
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=51.41 E-value=25 Score=28.76 Aligned_cols=23 Identities=13% Similarity=0.118 Sum_probs=17.0
Q ss_pred CCHHHHHHHHHhcCCeEEe--cCCC
Q 046751 59 HTPQVVVELIHRTSGLAVL--AHPW 81 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~Vl--AHP~ 81 (155)
..+..+++.||+.|+.+++ .|++
T Consensus 81 ~~~~~~~~~vh~~G~~i~~Ql~H~G 105 (349)
T 3hgj_A 81 PGLKELARRIREAGAVPGIQLAHAG 105 (349)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCG
T ss_pred HHHHHHHHHHHhCCCeEEEEeccCC
Confidence 4456789999999998764 5544
No 31
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=47.34 E-value=29 Score=26.59 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCc---CChHHHHHHHHHcCCCEE
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWAL---KNPAAIIRKLKDVGLHRL 101 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~---~~~~~~l~~l~~~GldGI 101 (155)
..++++++.+|++ |..|.-||... ..+...++.|...+.|||
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGI 87 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGI 87 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEE
Confidence 6799999999999 79999999743 234556666655789988
No 32
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=44.72 E-value=42 Score=27.31 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCC-----cCChHHHHHHHHHcCCCEEEEecCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWA-----LKNPAAIIRKLKDVGLHRLEVYRSDGK 109 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~-----~~~~~~~l~~l~~~GldGIEv~~~~~~ 109 (155)
+.+++-|++.|++|--+..-..+. ....+++++++++.|+|.||+-...-+
T Consensus 80 ~~l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~ 135 (276)
T 1u83_A 80 KDLEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLP 135 (276)
T ss_dssp TTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSC
T ss_pred HHHHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCccc
Confidence 569999999999995555332210 123578999999999999999998766
No 33
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=44.54 E-value=21 Score=26.35 Aligned_cols=12 Identities=25% Similarity=0.249 Sum_probs=5.6
Q ss_pred HHHHHHcCCCEE
Q 046751 90 IRKLKDVGLHRL 101 (155)
Q Consensus 90 l~~l~~~GldGI 101 (155)
++.+++.|.|+|
T Consensus 70 ~~~~~~~Gad~v 81 (211)
T 3f4w_A 70 SQLLFDAGADYV 81 (211)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHhcCCCEE
Confidence 444444444444
No 34
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=44.00 E-value=43 Score=25.48 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=24.2
Q ss_pred hHHHHHHHHHcCCCEEEEecCCCCc---------ccccceeee
Q 046751 86 PAAIIRKLKDVGLHRLEVYRSDGKL---------VGVIFTLQD 119 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~~~~~~---------~~~~L~~tg 119 (155)
..+.++.+++.|+||||........ +++||.+++
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSA 82 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECE
T ss_pred HHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEE
Confidence 4677888888899999988763322 367887754
No 35
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=42.62 E-value=23 Score=27.34 Aligned_cols=41 Identities=20% Similarity=0.329 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|.+ |..+. .+.+..+.+.|+|||=.-+|
T Consensus 194 ~~~v~~~~~~G-~~V~~--WTvn~-~~~~~~l~~~GVDgIiTD~P 234 (250)
T 3ks6_A 194 AGLMAQVQAAG-LDFGC--WAAHT-PSQITKALDLGVKVFTTDRP 234 (250)
T ss_dssp HHHHHHHHHTT-CEEEE--ECCCS-HHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEEE--EeCCC-HHHHHHHHHcCCCEEEcCCH
Confidence 56778888775 55543 44333 56778899999999965544
No 36
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=40.74 E-value=27 Score=27.84 Aligned_cols=41 Identities=22% Similarity=0.392 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|. +|..+. .+.+..+.+.|+|||=.-+|
T Consensus 258 ~~~v~~~~~~G-l~V~--~WTVn~-~~~~~~l~~~GVDgIiTD~P 298 (313)
T 3l12_A 258 PELVAEAHDLG-LIVL--TWTVNE-PEDIRRMATTGVDGIVTDYP 298 (313)
T ss_dssp HHHHHHHHHTT-CEEE--EBCCCS-HHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEE--EEcCCC-HHHHHHHHHcCCCEEEeCCH
Confidence 46778888774 5564 444433 56788899999999955443
No 37
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=40.55 E-value=34 Score=24.29 Aligned_cols=39 Identities=15% Similarity=0.282 Sum_probs=20.6
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHH
Q 046751 13 KWENVAKIAGKGVAPGRLHVARAMVEAGHVENLKHAFADI 52 (155)
Q Consensus 13 ~~e~v~~~a~~~~~i~r~Hia~~Lv~~g~~~~~~~af~~~ 52 (155)
++.+..+..+-..+..|.-|.++|.+.+ .-+..+.++..
T Consensus 5 ~~~~~L~~~g~r~T~qR~~Il~~l~~~~-h~ta~ei~~~l 43 (145)
T 3eyy_A 5 DWKSDLRQRGYRLTPQRQLVLEAVDTLE-HATPDDILGEV 43 (145)
T ss_dssp THHHHHHTTTCCCCHHHHHHHHHHHHHS-SBCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCHHHHHHHHHHHhcC-CCCHHHHHHHH
Confidence 3444444444333556677777777655 33444444444
No 38
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=38.56 E-value=22 Score=27.79 Aligned_cols=27 Identities=37% Similarity=0.337 Sum_probs=19.6
Q ss_pred EEecCCCCcCChHHHHHHHHHcCCCEEEEe
Q 046751 75 AVLAHPWALKNPAAIIRKLKDVGLHRLEVY 104 (155)
Q Consensus 75 ~VlAHP~~~~~~~~~l~~l~~~GldGIEv~ 104 (155)
.|+||+- +.-..++..++.|.|+||+=
T Consensus 8 ~iiaHrE---NTl~Af~~A~~~Gad~IE~D 34 (285)
T 1xx1_A 8 WNLAHMV---NAVAQIPDFLDLGANALEAD 34 (285)
T ss_dssp EEEESCC---CSTTHHHHHHHHTCSEEEEE
T ss_pred EEEEehh---ccHHHHHHHHHhCCCEEEEE
Confidence 4899984 22345667778899999963
No 39
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=37.45 E-value=22 Score=26.58 Aligned_cols=34 Identities=12% Similarity=-0.031 Sum_probs=24.6
Q ss_pred hHHHHHHHHHcCCCEEEEecCCCCc--------ccccceeee
Q 046751 86 PAAIIRKLKDVGLHRLEVYRSDGKL--------VGVIFTLQD 119 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~~~~~~--------~~~~L~~tg 119 (155)
..+.++.+++.|++|||...+.... +++||.+++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 17 FIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp GGGHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEE
Confidence 3567788888999999988754322 377887764
No 40
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=36.91 E-value=93 Score=26.04 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=15.3
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPW 81 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~ 81 (155)
.+..+++.||+.|+.++ |.|++
T Consensus 94 ~~k~l~~avh~~G~~i~~QL~H~G 117 (402)
T 2hsa_B 94 EWKKIVDVVHAKGAVIFCQLWHVG 117 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCT
T ss_pred HHHHHHHHHHhcCCeEEEEeccCC
Confidence 34567889999999754 46643
No 41
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=36.52 E-value=47 Score=26.59 Aligned_cols=49 Identities=4% Similarity=0.004 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCeEEecCCCC-----cCChHHHHHHHHHcCCCEEEEecCCCC
Q 046751 61 PQVVVELIHRTSGLAVLAHPWA-----LKNPAAIIRKLKDVGLHRLEVYRSDGK 109 (155)
Q Consensus 61 ~~e~I~~I~~aGGv~VlAHP~~-----~~~~~~~l~~l~~~GldGIEv~~~~~~ 109 (155)
+++-|++.|++|--+..-..+. ....+++++++++.|+|.||+-...-+
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~ 110 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSD 110 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSC
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCccc
Confidence 7888999999985544332110 124578999999999999999998766
No 42
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=34.31 E-value=61 Score=24.92 Aligned_cols=41 Identities=17% Similarity=0.421 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|. +|..+. .+.+..+.+.|+|||-.-+|
T Consensus 226 ~~~v~~~~~~G-l~v~--~wTvn~-~~~~~~l~~~GvdgIiTD~P 266 (272)
T 3ch0_A 226 KKDIDAAHKLG-MRVI--PWTVNT-KEEIETLISLGVDGIITDYP 266 (272)
T ss_dssp HHHHHHHHHTT-CEEC--CBCCCS-HHHHHHHHHHTCSEEEESCG
T ss_pred HHHHHHHHHcC-CEEE--EeccCC-HHHHHHHHHcCCCEEEeCCH
Confidence 45778888766 4453 554444 45678888999999976554
No 43
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=34.26 E-value=84 Score=25.81 Aligned_cols=22 Identities=18% Similarity=0.141 Sum_probs=15.3
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPW 81 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~ 81 (155)
....+.+.+|+.|+.++ |.|++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~G 105 (364)
T 1vyr_A 82 AWKKITAGVHAEDGRIAVQLWHTG 105 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCT
T ss_pred HHHHHHHHHHhcCCeEEEEeccCC
Confidence 35567888999998644 56644
No 44
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=33.31 E-value=84 Score=26.01 Aligned_cols=22 Identities=32% Similarity=0.223 Sum_probs=15.3
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPW 81 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~ 81 (155)
....+.+.+|+.|+.++ |.|++
T Consensus 86 ~~k~l~~avh~~G~~i~~QL~H~G 109 (377)
T 2r14_A 86 GWKGVVEAVHAKGGRIALQLWHVG 109 (377)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCT
T ss_pred HHHHHHHHHhhcCCeEEEEccCCc
Confidence 35567888999998644 56643
No 45
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=32.57 E-value=36 Score=25.92 Aligned_cols=34 Identities=26% Similarity=0.154 Sum_probs=25.5
Q ss_pred hHHHHHHHHHcCCCEEEEecCC---CCc----------ccccceeee
Q 046751 86 PAAIIRKLKDVGLHRLEVYRSD---GKL----------VGVIFTLQD 119 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~~~---~~~----------~~~~L~~tg 119 (155)
..+.++.+++.|+||||..... .+. +++||.+++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 4678888999999999998542 222 378888877
No 46
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=32.11 E-value=43 Score=25.73 Aligned_cols=41 Identities=22% Similarity=0.216 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|.+ |..+ ..+.+..+.+.|+|||-.-+|
T Consensus 200 ~~~v~~~~~~G-~~v~~--WTvn-~~~~~~~l~~~GVdgIiTD~P 240 (252)
T 3qvq_A 200 VQQVSDIKAAG-YKVLA--FTIN-DESLALKLYNQGLDAVFSDYP 240 (252)
T ss_dssp HHHHHHHHHTT-CEEEE--ECCC-CHHHHHHHHHTTCCEEEESSH
T ss_pred HHHHHHHHHCC-CEEEE--EcCC-CHHHHHHHHHcCCCEEEeCCH
Confidence 45677777765 45543 3333 356778899999999976554
No 47
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=31.82 E-value=71 Score=26.31 Aligned_cols=22 Identities=23% Similarity=0.154 Sum_probs=15.3
Q ss_pred CHHHHHHHHHhcCCeEE--ecCCC
Q 046751 60 TPQVVVELIHRTSGLAV--LAHPW 81 (155)
Q Consensus 60 ~~~e~I~~I~~aGGv~V--lAHP~ 81 (155)
....+.+.+|+.|+.++ |.|++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~G 105 (365)
T 2gou_A 82 GWRIVTEAVHAKGCAIFAQLWHVG 105 (365)
T ss_dssp HHHHHHHHHHHHSCEEEEEEECCT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCC
Confidence 35567888999998644 56743
No 48
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=30.71 E-value=66 Score=24.61 Aligned_cols=41 Identities=12% Similarity=0.355 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|. +|..+. .+.+..+.+.|+|||-.-+|
T Consensus 201 ~~~v~~~~~~G-~~v~--~wTvn~-~~~~~~l~~~GvdgIiTD~P 241 (252)
T 2pz0_A 201 PELVEGCKKNG-VKLF--PWTVDR-KEDMERMIKAGVDGIITDDP 241 (252)
T ss_dssp HHHHHHHHHTT-CEEC--CBCCCS-HHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEE--EECCCC-HHHHHHHHHcCCCEEEcCCH
Confidence 56778888776 5554 454433 56678888999999866554
No 49
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=30.26 E-value=24 Score=28.35 Aligned_cols=61 Identities=11% Similarity=-0.050 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecCCCCc----ccccceeeecCCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRSDGKL----VGVIFTLQDGSHY 123 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~~~~~----~~~~L~~tgGSD~ 123 (155)
+...+.++.+++.+|++++-|+.. ....++.+.+.|+|++-+-+ ..+. ++++..+.||=|-
T Consensus 217 p~~k~i~~~i~~~~g~~~i~~~~g---~~~~l~~l~~~g~d~~~~d~-~~dl~~~~~~~~~~l~Gn~dp 281 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRG---SSSFIDLAVDYRADALSVDW-SVDIPELFKIYDKGFQGNLEP 281 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESS---HHHHHHHHTTSCCSEEECCT-TSCHHHHHHHCCSEEECCBCG
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCC---cHHHHHHHHHcCCCEEEeCC-CCCHHHHHHhCCeEEEECCCH
Confidence 556778889988756889999753 25788999999999987643 2332 2236677777663
No 50
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=29.78 E-value=42 Score=25.69 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCc----------cccccee
Q 046751 87 AAIIRKLKDVGLHRLEVYRSDGKL----------VGVIFTL 117 (155)
Q Consensus 87 ~~~l~~l~~~GldGIEv~~~~~~~----------~~~~L~~ 117 (155)
.+.++.+++.|+||||........ +++||.+
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~ 84 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPI 84 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeE
Confidence 567788888999999998763221 3678876
No 51
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=29.59 E-value=68 Score=24.34 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecCC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRSD 107 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~~ 107 (155)
.+.|+.+|++| +.|.+ |..+. .+.+..+.+.|+|||-.-+|.
T Consensus 197 ~~~v~~~~~~G-~~v~~--wTvn~-~~~~~~l~~~GvdgI~TD~p~ 238 (247)
T 2otd_A 197 KARVMQLKDAG-LRILV--YTVNK-PQHAAELLRWGVDCICTDAID 238 (247)
T ss_dssp HHHHHHHHHTT-CEEEE--ECCCC-HHHHHHHHHHTCSEEEESCTT
T ss_pred HHHHHHHHHCC-CEEEE--EccCC-HHHHHHHHHcCCCEEEeCCHH
Confidence 56778888776 55553 33333 566788899999999877764
No 52
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.25 E-value=57 Score=24.45 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=15.9
Q ss_pred hHHHHHHHHHcCCCEEEEecC
Q 046751 86 PAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~~ 106 (155)
..+.++.+++.|++|||....
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~ 52 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDF 52 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHhCCCEEEEecc
Confidence 456777888888888888754
No 53
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=29.10 E-value=64 Score=24.13 Aligned_cols=21 Identities=24% Similarity=0.521 Sum_probs=17.9
Q ss_pred ChHHHHHHHHHcCCCEEEEec
Q 046751 85 NPAAIIRKLKDVGLHRLEVYR 105 (155)
Q Consensus 85 ~~~~~l~~l~~~GldGIEv~~ 105 (155)
...+.++.+++.|++|||.+.
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECT
T ss_pred CHHHHHHHHHHcCCCEEeecC
Confidence 356788999999999999975
No 54
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=28.77 E-value=72 Score=24.88 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|. +|..+. .+.+..+.+.|+|||=.-+|
T Consensus 231 ~~~v~~~~~~G-~~v~--~wTvn~-~~~~~~l~~~GVdgIiTD~P 271 (287)
T 2oog_A 231 EQNTHHLKDLG-FIVH--PYTVNE-KADMLRLNKYGVDGVFTNFA 271 (287)
T ss_dssp HHHHHHHHHTT-CEEC--CBCCCS-HHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CeEE--EEeCCC-HHHHHHHHHcCCCEEEeCCH
Confidence 45677888775 5553 455443 56778889999999965544
No 55
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=28.31 E-value=34 Score=27.17 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHhcCC-eEEec----CCCCcCChHHHHHHHHHcCCCEE
Q 046751 45 LKHAFADISMMGDMHTPQVVVELIHRTSG-LAVLA----HPWALKNPAAIIRKLKDVGLHRL 101 (155)
Q Consensus 45 ~~~af~~~~~l~~g~~~~e~I~~I~~aGG-v~VlA----HP~~~~~~~~~l~~l~~~GldGI 101 (155)
++.+-.+- |..|.+++++++++++... ++++- .|......++.++++++.|+||+
T Consensus 61 Iq~a~~rA--L~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~ 120 (252)
T 3tha_A 61 IADAAKIA--LDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKFVKKAKSLGICAL 120 (252)
T ss_dssp HHHHHHHH--HHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHH--HHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHHHHHHHHcCCCEE
Confidence 45555555 6667777777777776543 22211 11100023456667777777776
No 56
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=27.46 E-value=73 Score=25.94 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCc--CChHHHHHHHHHcCCCEEEE
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWAL--KNPAAIIRKLKDVGLHRLEV 103 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~--~~~~~~l~~l~~~GldGIEv 103 (155)
++.+.+-++|..++++.|--|+-.. ....+.++.++++|+|-|=.
T Consensus 139 iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILT 185 (287)
T 3iwp_A 139 IDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLT 185 (287)
T ss_dssp BCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEE
T ss_pred cCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEEC
Confidence 8888999999999999999998631 23567889999999998844
No 57
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=27.36 E-value=76 Score=23.93 Aligned_cols=20 Identities=15% Similarity=0.306 Sum_probs=15.0
Q ss_pred hHHHHHHHHHcCCCEEEEec
Q 046751 86 PAAIIRKLKDVGLHRLEVYR 105 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~ 105 (155)
..+.++.+++.|++|||.+.
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~ 36 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWG 36 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEH
T ss_pred HHHHHHHHHHhCCCEEEEcc
Confidence 45677777888888888764
No 58
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=27.35 E-value=43 Score=25.62 Aligned_cols=40 Identities=10% Similarity=0.211 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 63 VVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 63 e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
+.|+.+|++| +.|.+ |..+ ..+.+..+.+.|+|||-.-+|
T Consensus 187 ~~v~~~~~~G-~~v~~--WTVn-~~~~~~~l~~~GVdgIiTD~P 226 (238)
T 3no3_A 187 DWVKDCKVLG-MTSNV--WTVD-DPKLMEEMIDMGVDFITTDLP 226 (238)
T ss_dssp THHHHHHHTT-CEEEE--ECCC-SHHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHCC-CEEEE--ECCC-CHHHHHHHHHcCCCEEECCCH
Confidence 4567777765 44443 3333 356788999999999976554
No 59
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=26.85 E-value=1.1e+02 Score=23.77 Aligned_cols=48 Identities=15% Similarity=0.120 Sum_probs=36.0
Q ss_pred HHHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecCCCC
Q 046751 61 PQVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRSDGK 109 (155)
Q Consensus 61 ~~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~~~~ 109 (155)
..+..+.+.+.+=++|+-.... ....++.+.+.+.|++.||+-.....
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t~~ 71 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRSDA 71 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTSTT
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3467889999999999976532 23457788899999999999654433
No 60
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=26.20 E-value=51 Score=25.04 Aligned_cols=34 Identities=6% Similarity=-0.033 Sum_probs=25.2
Q ss_pred HHHHHHHHHcCCCEEEEecCCCC---c----------ccccceeeec
Q 046751 87 AAIIRKLKDVGLHRLEVYRSDGK---L----------VGVIFTLQDG 120 (155)
Q Consensus 87 ~~~l~~l~~~GldGIEv~~~~~~---~----------~~~~L~~tgG 120 (155)
.+.++.+++.|+||||+...... + +++||.+++.
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 45778889999999999975432 1 3788887764
No 61
>2qhq_A Unknown function protein VPA0580; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE MLY; 1.76A {Vibrio parahaemolyticus} PDB: 2qm2_A*
Probab=25.81 E-value=22 Score=25.68 Aligned_cols=44 Identities=18% Similarity=0.205 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEE
Q 046751 57 DMHTPQVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLE 102 (155)
Q Consensus 57 ~g~~~~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIE 102 (155)
.+++-++++.+--+.=-.-||++|-..++ ..|+.+...|++||.
T Consensus 73 ~~Ls~~~TL~~FG~~Yr~dVL~~PeG~dH--~NIRnFm~~Gw~GI~ 116 (125)
T 2qhq_A 73 NALDXEATLACFGRFYREDVLLHPENNDH--QNIRNFMVTGWEGIQ 116 (125)
T ss_dssp TTCCHHHHHHHTTHHHHTTTTTCTTCCCC--HHHHHHHHHGGGGEE
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCCCCCh--HHHHHHHHcCCCCce
Confidence 44888888876544333469999976443 678889999999995
No 62
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=25.48 E-value=69 Score=24.03 Aligned_cols=41 Identities=27% Similarity=0.378 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.++.+|++| +.|.+ |..+. .+.+..+.+.|+|||-.-+|
T Consensus 176 ~~~v~~~~~~G-~~v~~--wtvn~-~~~~~~l~~~GvdgI~TD~p 216 (224)
T 1vd6_A 176 EEAVAGWRKRG-LFVVA--WTVNE-EGEARRLLALGLDGLIGDRP 216 (224)
T ss_dssp HHHHHHHHHTT-CEEEE--ECCCC-HHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEEE--EeCCC-HHHHHHHHhcCCCEEEcCCH
Confidence 56888999876 55654 33333 56778899999999966554
No 63
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=24.07 E-value=1.5e+02 Score=22.54 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCeEEecCCC-CcCChHHHHHHHHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPW-ALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~-~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.|.+.-. ..++..+.+..+.+.|+|||-.-+|
T Consensus 202 ~~~v~~~~~~G-~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~TD~p 246 (258)
T 2o55_A 202 KEQVCTAHEKG-LSVTVWMPWIFDDSEEDWKKCLELQVDLICSNYP 246 (258)
T ss_dssp HHHHHHHHHTT-CEEEEECCTTCCCCHHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEEEeeCCCCCCCHHHHHHHHHcCCCEEEeCCH
Confidence 56778888876 55554322 0113356678888899999866554
No 64
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=23.80 E-value=1.5e+02 Score=22.87 Aligned_cols=48 Identities=8% Similarity=-0.041 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCeEEecC--CCCcC--ChHHHHHHHHHcCCCEEEEecCCCC
Q 046751 62 QVVVELIHRTSGLAVLAH--PWALK--NPAAIIRKLKDVGLHRLEVYRSDGK 109 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAH--P~~~~--~~~~~l~~l~~~GldGIEv~~~~~~ 109 (155)
++..+..++.|-.+.++| ++..+ ...+.+..|.+.|.|+||+=.|..+
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sd 56 (262)
T 2ekc_A 5 SDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSD 56 (262)
T ss_dssp HHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSC
T ss_pred HHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 455555555555455544 33222 1235677788899999999777644
No 65
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=23.17 E-value=1.1e+02 Score=24.20 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCC------hHHHHHHHHHcCCCEEEEecCC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKN------PAAIIRKLKDVGLHRLEVYRSD 107 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~------~~~~l~~l~~~GldGIEv~~~~ 107 (155)
.+.|+.+|+.|=.+..--+...+. ..+.+..+++.|+|||-.-+|.
T Consensus 218 ~~~V~~ah~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P~ 269 (292)
T 3mz2_A 218 REVIDMLHERGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRPI 269 (292)
T ss_dssp HHHHHHHHHTTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCHH
Confidence 467888888874332211221110 1357788999999999876663
No 66
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=22.99 E-value=51 Score=25.98 Aligned_cols=23 Identities=17% Similarity=0.096 Sum_probs=16.4
Q ss_pred hHHHHHHHHHc-CCCEEEEecCCC
Q 046751 86 PAAIIRKLKDV-GLHRLEVYRSDG 108 (155)
Q Consensus 86 ~~~~l~~l~~~-GldGIEv~~~~~ 108 (155)
..+.++.+++. |++|||...+..
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~ 58 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFT 58 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCS
T ss_pred HHHHHHHHHHhCCCCEEEecCCCc
Confidence 35677777788 888888766543
No 67
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=22.20 E-value=57 Score=26.80 Aligned_cols=45 Identities=13% Similarity=0.200 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEEEEecC
Q 046751 61 PQVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 61 ~~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGIEv~~~ 106 (155)
+.++|+.-...+|..---|||..+. .+.++.+.+.|+|||=.-+|
T Consensus 227 l~~ai~~RDs~~~~i~~V~vWTVNd-~~~m~~l~~~GVDGIITD~P 271 (302)
T 3rlg_A 227 VNAAVANRDSANGFINKVYYWTVDK-RSTTRDALDAGVDGIMTNYP 271 (302)
T ss_dssp HHHHHHHHTSTTCCCSEEEEECCCS-HHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHhccCCCCceEEEEEEeCCC-HHHHHHHHHcCCCEEECCCH
Confidence 3556665555556443445776544 57788999999999965554
No 68
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=22.10 E-value=1.5e+02 Score=26.75 Aligned_cols=67 Identities=10% Similarity=0.115 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCC-c-CChHHHHHHHHHcCCCEEEEecCCCCc--------------ccccceeeecCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWA-L-KNPAAIIRKLKDVGLHRLEVYRSDGKL--------------VGVIFTLQDGSH 122 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~-~-~~~~~~l~~l~~~GldGIEv~~~~~~~--------------~~~~L~~tgGSD 122 (155)
.+++++++..|+-|=-.++=|-.. + ...++.++.+.+.|++||=+=+-.... ++++|++ |
T Consensus 347 ~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~l~V----~ 422 (641)
T 3a24_A 347 IDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLIL----D 422 (641)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTTCEE----E
T ss_pred CCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHHcCCEE----E
Confidence 579999999999884444433321 2 234568888999999999887654332 3889886 8
Q ss_pred CCCCCcc
Q 046751 123 YESKKEI 129 (155)
Q Consensus 123 ~H~~~~~ 129 (155)
||+...+
T Consensus 423 fHg~~~P 429 (641)
T 3a24_A 423 LHGTHKP 429 (641)
T ss_dssp ECSCCCC
T ss_pred cCCCcCC
Confidence 9987543
No 69
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=21.67 E-value=1.2e+02 Score=22.42 Aligned_cols=18 Identities=22% Similarity=0.445 Sum_probs=11.8
Q ss_pred HHHHHHHHHcCCCEEEEe
Q 046751 87 AAIIRKLKDVGLHRLEVY 104 (155)
Q Consensus 87 ~~~l~~l~~~GldGIEv~ 104 (155)
.+.++.+++.|+||||+.
T Consensus 22 ~~~l~~~~~~G~~~vEl~ 39 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELR 39 (272)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEee
Confidence 456666666677777765
No 70
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=21.67 E-value=70 Score=20.07 Aligned_cols=44 Identities=20% Similarity=0.296 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCC-cC-C---hHHHHHHHHHcCCCEEE
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWA-LK-N---PAAIIRKLKDVGLHRLE 102 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~-~~-~---~~~~l~~l~~~GldGIE 102 (155)
.+-++.++.|++.||+.-+-+=.. |. . .-.++++|.+-|+--||
T Consensus 10 ~~e~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrLe~KGLI~le 58 (59)
T 2xvc_A 10 ITERELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLIAVE 58 (59)
T ss_dssp CCHHHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred ccHHHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHHHHCCCeecc
Confidence 456788999999999988865321 11 1 23466777777876666
No 71
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=21.54 E-value=1.4e+02 Score=19.77 Aligned_cols=69 Identities=10% Similarity=-0.036 Sum_probs=44.0
Q ss_pred HHHhCCCCCCHHHHHHH----hCCCCCCCHHHHHHHHHHcCC--C---CCHHHHHHHHHhcCCC-CCHHHHHHHHHhcC
Q 046751 4 KLNKLKLPLKWENVAKI----AGKGVAPGRLHVARAMVEAGH--V---ENLKHAFADISMMGDM-HTPQVVVELIHRTS 72 (155)
Q Consensus 4 ~L~~~G~~I~~e~v~~~----a~~~~~i~r~Hia~~Lv~~g~--~---~~~~~af~~~~~l~~g-~~~~e~I~~I~~aG 72 (155)
.|+..|...+.+++... ..+...+....+...+..... . ..+..+|+.+..=++| ++.+|...+++..|
T Consensus 36 ~l~~~g~~~~~~~~~~l~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 114 (156)
T 1wdc_C 36 VCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 114 (156)
T ss_dssp HHHHTTCCCCHHHHHHTTCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSS
T ss_pred HHHHcCCCCCHHHHHHHHhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 45667888888877654 111225788888887776422 1 2245677766211233 89999999998876
No 72
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=21.36 E-value=12 Score=34.58 Aligned_cols=40 Identities=10% Similarity=0.155 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCCcC-C--hHHHHHHHHHcCCCEE
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWALK-N--PAAIIRKLKDVGLHRL 101 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~~~-~--~~~~l~~l~~~GldGI 101 (155)
--..+.++++|++|=-+.+- ..+ + .+...+.+++.||||+
T Consensus 291 ~~~k~lvd~~H~~gKeAmmF---lgD~WIGtEPy~~~F~~iGlDav 333 (759)
T 2zuv_A 291 ENVKQLADMSHAAGKEAMMF---LGDQWIGTEPYKDGFDELGLDAV 333 (759)
T ss_dssp HHHHHHHHHHHHTTCEEEEE---ESSSCTTTCTTSTTGGGGCCCEE
T ss_pred HHHHHHHHHHHhcCceeEEe---ccCceeccccchhhhhhcCCceE
Confidence 34678999999999887662 111 1 2334456777888887
No 73
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=21.14 E-value=97 Score=23.47 Aligned_cols=36 Identities=22% Similarity=0.223 Sum_probs=24.3
Q ss_pred HhcCCeEEecCCCCcC----ChHHHHHHHHHcCCCEEEEe
Q 046751 69 HRTSGLAVLAHPWALK----NPAAIIRKLKDVGLHRLEVY 104 (155)
Q Consensus 69 ~~aGGv~VlAHP~~~~----~~~~~l~~l~~~GldGIEv~ 104 (155)
|...-+.|+||=+... +.-..+....+.|.|+||+-
T Consensus 8 ~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~D 47 (234)
T 1o1z_A 8 HHHHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELD 47 (234)
T ss_dssp -CCCCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEE
T ss_pred cccceEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEE
Confidence 4455688999965321 23456677778999999963
No 74
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=21.00 E-value=1.2e+02 Score=19.53 Aligned_cols=43 Identities=2% Similarity=0.118 Sum_probs=31.7
Q ss_pred HHHHHHHcCCCCCHHHH--HHHHHhcCCC-CCHHHHHHHHHhcCCeEE
Q 046751 32 VARAMVEAGHVENLKHA--FADISMMGDM-HTPQVVVELIHRTSGLAV 76 (155)
Q Consensus 32 ia~~Lv~~g~~~~~~~a--f~~~~~l~~g-~~~~e~I~~I~~aGGv~V 76 (155)
+.+.|++.+|.=+.... ..+| ..+| .++.|.|+..+..|-+.+
T Consensus 7 lVk~L~~n~YLiTPsAYyLL~~~--ykkg~FsL~ELiKFAksrgtFvI 52 (75)
T 2kxe_A 7 FVKGLMKNGYLITPSAYYLLVGH--FNEGKFSLIELIKFAKSRETFII 52 (75)
T ss_dssp HHHHHHTTTCEECHHHHHHHHHH--HHTTSSCHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHCCceeCchHHHHHHHH--hhcccccHHHHHHHHHhcCcEEe
Confidence 56677788887664432 2566 6776 999999999999997655
No 75
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=20.80 E-value=70 Score=25.92 Aligned_cols=42 Identities=17% Similarity=0.293 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCC---------hHHHHHH-HHHcCCCEEEEecC
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKN---------PAAIIRK-LKDVGLHRLEVYRS 106 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~---------~~~~l~~-l~~~GldGIEv~~~ 106 (155)
.+.|+.+|++| +.| |||..+. ..++... +.+.|+|||=.-+|
T Consensus 297 ~~~v~~ah~~G-l~V--~~WTvn~~~l~~~~~d~~~~~~~~l~~~GVDgIiTD~P 348 (356)
T 1ydy_A 297 TGMVQDAQQNK-LVV--HPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFP 348 (356)
T ss_dssp CSHHHHHHHTT-CEE--CCBCBCTTSCCTTCSSHHHHHHHHHTTSCCSEEEESCH
T ss_pred HHHHHHHHHCC-CEE--EEEEECcccccccccCHHHHHHHHHHHcCCCEEEeCCH
Confidence 56888999877 445 5665442 2333254 56899999965443
No 76
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=20.61 E-value=1.3e+02 Score=21.72 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHhc--CCeEEecCCCC-cCChHHHHHHHHHcCC
Q 046751 59 HTPQVVVELIHRT--SGLAVLAHPWA-LKNPAAIIRKLKDVGL 98 (155)
Q Consensus 59 ~~~~e~I~~I~~a--GGv~VlAHP~~-~~~~~~~l~~l~~~Gl 98 (155)
+|++|+.+.+++. + |.. ..-....|+.|.+.|+
T Consensus 49 ~sA~eI~~~l~~~~~~-------~~is~aTVYRtL~~L~e~Gl 84 (162)
T 4ets_A 49 YTPESLYMEIKQAEPD-------LNVGIATVYRTLNLLEEAEM 84 (162)
T ss_dssp BCHHHHHHHHHHHCGG-------GCCCHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHhhcCC-------CCCCHHHHHHHHHHHHHCCC
Confidence 6777777777665 3 110 0113456677777664
No 77
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=20.59 E-value=59 Score=24.23 Aligned_cols=21 Identities=14% Similarity=0.195 Sum_probs=18.0
Q ss_pred hHHHHHHHHHcCCCEEEEecC
Q 046751 86 PAAIIRKLKDVGLHRLEVYRS 106 (155)
Q Consensus 86 ~~~~l~~l~~~GldGIEv~~~ 106 (155)
..+.++.+++.|+||||.+.+
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~ 40 (275)
T 3qc0_A 20 FAEAVDICLKHGITAIAPWRD 40 (275)
T ss_dssp HHHHHHHHHHTTCCEEECBHH
T ss_pred HHHHHHHHHHcCCCEEEeccc
Confidence 467889999999999999774
No 78
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=20.57 E-value=62 Score=25.84 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCCeEEecCCCCcCChHHHHHHHHHcCCCEE
Q 046751 62 QVVVELIHRTSGLAVLAHPWALKNPAAIIRKLKDVGLHRL 101 (155)
Q Consensus 62 ~e~I~~I~~aGGv~VlAHP~~~~~~~~~l~~l~~~GldGI 101 (155)
.+.++.|++..|+.+-..|+.. ..+.++.|++.|++.+
T Consensus 129 ~~l~~~ik~~~~i~i~~s~g~~--~~e~l~~L~~aG~~~i 166 (350)
T 3t7v_A 129 VELVQIVKEELGLPIMISPGLM--DNATLLKAREKGANFL 166 (350)
T ss_dssp HHHHHHHHHHHCSCEEEECSSC--CHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHhhcCceEEEeCCCC--CHHHHHHHHHcCCCEE
Confidence 4556666654455555555532 2566777777777655
No 79
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=20.25 E-value=71 Score=26.12 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=22.7
Q ss_pred CCHHHHHHHHHhcCCeEEecCCCC
Q 046751 59 HTPQVVVELIHRTSGLAVLAHPWA 82 (155)
Q Consensus 59 ~~~~e~I~~I~~aGGv~VlAHP~~ 82 (155)
.+++++.++.++..+..|+|||-.
T Consensus 176 ~t~e~i~~~~~~~P~a~v~~HPEc 199 (300)
T 1wzu_A 176 FTLDDVERAKKLHPNAKLMIHPEC 199 (300)
T ss_dssp CCHHHHHHHHHHCTTCEEEECTTS
T ss_pred CCHHHHHHHHHHCCCCEEEECCCC
Confidence 899999999999999999999975
Done!