Query         046755
Match_columns 155
No_of_seqs    228 out of 1073
Neff          7.8 
Searched_HMMs 29240
Date          Mon Mar 25 06:46:59 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046755hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2pnq_A [pyruvate dehydrogenase  99.9 6.5E-26 2.2E-30  191.6   6.8  131    1-131   278-459 (467)
  2 2p8e_A PPM1B beta isoform vari  99.9 1.6E-22 5.4E-27  162.1   8.8   97    1-130   200-301 (307)
  3 2i0o_A Ser/Thr phosphatase; be  99.9 5.3E-22 1.8E-26  158.7   7.4  100    1-127   199-304 (304)
  4 3d8k_A PP2C, protein phosphata  99.9 9.1E-22 3.1E-26  162.2   9.0   96    1-130   226-327 (377)
  5 1a6q_A Phosphatase 2C; catalyt  99.8 2.4E-21 8.3E-26  159.9   9.2   97    1-130   193-295 (382)
  6 2j4o_A Mitogen-activated prote  99.8 1.9E-21 6.5E-26  161.4   8.1  118    1-131   239-370 (401)
  7 3qn1_B Protein phosphatase 2C   99.8   2E-21 6.9E-26  157.7   8.1   90    1-132   222-333 (337)
  8 2iq1_A Protein phosphatase 2C   99.8 3.9E-21 1.3E-25  151.5   9.4   89    1-130   175-265 (274)
  9 2irm_A Mitogen-activated prote  99.8 2.5E-21 8.5E-26  158.3   8.2  116    1-129   225-358 (358)
 10 3kdj_B Protein phosphatase 2C   99.8 3.9E-21 1.3E-25  154.5   7.9   89    1-131   193-309 (316)
 11 2i44_A Serine-threonine phosph  99.8 5.5E-21 1.9E-25  153.7   6.6   96    1-128   216-322 (324)
 12 4da1_A Protein phosphatase 1K,  99.8 3.5E-20 1.2E-24  153.1   9.1   90    1-131   289-380 (389)
 13 2isn_A NYSGXRC-8828Z, phosphat  99.8 2.5E-20 8.6E-25  152.9   7.6   96    1-130   233-336 (364)
 14 2pk0_A Serine/threonine protei  99.7 9.8E-18 3.4E-22  129.6   8.6   71   36-128   176-247 (250)
 15 2jfr_A Ser-Thr phosphatase MSP  99.7 2.4E-17 8.3E-22  126.2   8.8   69   36-126   165-233 (234)
 16 2j82_A TPPHA, protein serine-t  99.7 2.5E-17 8.5E-22  126.5   8.4   69   36-126   172-240 (240)
 17 1txo_A Putative bacterial enzy  99.7 2.6E-17   9E-22  126.3   8.4   70   36-127   167-236 (237)
 18 3rnr_A Stage II sporulation E   99.6 1.2E-16   4E-21  121.5   2.6   65   37-126   143-211 (211)
 19 3t91_A Stage II sporulation pr  98.9 1.9E-09 6.5E-14   82.6   7.1   79   38-135   142-228 (242)
 20 3zt9_A Serine phosphatase; hyd  98.7 1.4E-08 4.6E-13   75.9   5.0   63   38-125   131-193 (193)
 21 3pu9_A Protein serine/threonin  98.7 3.8E-08 1.3E-12   75.8   7.3   73   38-129   145-226 (242)
 22 3f79_A Probable two-component   98.5 8.6E-08 2.9E-12   73.9   4.2   67   38-127   178-253 (255)
 23 3ke6_A Protein RV1364C/MT1410;  97.9 5.1E-05 1.7E-09   62.3   9.1   75   38-129   169-259 (399)
 24 3eq2_A Probable two-component   96.2  0.0025 8.6E-08   51.5   3.1   26   40-66    319-344 (394)
 25 3cqb_A Probable protease HTPX   36.7      30   0.001   22.4   3.1   41   34-75     47-89  (107)
 26 2m0o_A PHD finger protein 1; t  35.5      19 0.00064   22.5   1.7   28   31-61     15-42  (79)
 27 4hcz_A PHD finger protein 1; p  25.9      41  0.0014   19.8   2.0   17   45-61      3-19  (58)
 28 2xk0_A Polycomb protein PCL; t  24.7      43  0.0015   20.4   2.0   18   44-61     14-31  (69)
 29 3c37_A Peptidase, M48 family;   22.0      55  0.0019   24.5   2.6   39   34-75     67-106 (253)

No 1  
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.92  E-value=6.5e-26  Score=191.57  Aligned_cols=131  Identities=32%  Similarity=0.508  Sum_probs=86.1

Q ss_pred             CccccccccccccccCC----CC--------CCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHH
Q 046755            1 ISRSIGDAYLKKVEFNR----EP--------LLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQE   68 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~----~~--------~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~e   68 (155)
                      |||||||..+|++....    .+        ...++..+.+.++|||+++|||..++|.++|+|||||||||||+|+++|
T Consensus       278 vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~e  357 (467)
T 2pnq_A          278 PFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQD  357 (467)
T ss_dssp             SSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred             cchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHH
Confidence            69999999999642110    00        1134556677889999999999999999999999999999999999999


Q ss_pred             HHHHHHcCC-------c------------------------------chHHHHHHHHHHHHH--HHhhhhhhhhhhhccc
Q 046755           69 AVDIVHNCP-------R------------------------------NGVARKLVKAALHEA--AKKREMRYSDLKKIDR  109 (155)
Q Consensus        69 i~~~v~~~~-------~------------------------------~~~a~~L~~~a~~~~--~~~~~~~~~~~~~~~~  109 (155)
                      +++++....       +                              +++|..|++.|+..+  ..-+..++..++.++.
T Consensus       358 iv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~  437 (467)
T 2pnq_A          358 VVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPE  437 (467)
T ss_dssp             HHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC--------------------
T ss_pred             HHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCCc
Confidence            999997531       1                              567899999999765  2123334556778899


Q ss_pred             cCCCccCCceEEEEEEcCCccc
Q 046755          110 GVRRHFHDDITVIILFLDSYLI  131 (155)
Q Consensus       110 ~~~rg~~DNiTvivv~l~~~~~  131 (155)
                      +.+|.++|||||+||+|+.+..
T Consensus       438 ~~~R~~~DdITViVv~~~~~~~  459 (467)
T 2pnq_A          438 ELARMYRDDITIIVVQFNSHVV  459 (467)
T ss_dssp             -----CCSCEEEEEEEECHHHH
T ss_pred             cccccCCCCcEEEEEEeCchHh
Confidence            9999999999999999987554


No 2  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.87  E-value=1.6e-22  Score=162.08  Aligned_cols=97  Identities=27%  Similarity=0.442  Sum_probs=80.0

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHc-----
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHN-----   75 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~-----   75 (155)
                      |||||||..+|..+..            .+.+|+|+++||+..+++.++|+|||||||||||+|+++|+++++..     
T Consensus       200 ltRalGd~~~k~~~~~------------~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~  267 (307)
T 2p8e_A          200 VSRALGDYDYKCVDGK------------GPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVS  267 (307)
T ss_dssp             CSBCEECGGGSCCTTC------------CGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTC
T ss_pred             ccccccCHHHhcCccc------------CCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcC
Confidence            6999999999965311            23457899999999999999988999999999999999999999986     


Q ss_pred             CCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCcc
Q 046755           76 CPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYL  130 (155)
Q Consensus        76 ~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~  130 (155)
                      ...+.+|+.|++.|+.                     +|+.||||||||++....
T Consensus       268 ~~~~~~a~~Lv~~A~~---------------------~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          268 DDLENVCNWVVDTCLH---------------------KGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             CCHHHHHHHHHHHHHH---------------------TTCCSCEEEEEEEC----
T ss_pred             CCHHHHHHHHHHHHHH---------------------cCCCCCeEEEEEECCCCC
Confidence            2446788999999874                     678999999999997654


No 3  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.85  E-value=5.3e-22  Score=158.71  Aligned_cols=100  Identities=25%  Similarity=0.460  Sum_probs=75.3

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHc-----
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHN-----   75 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~-----   75 (155)
                      |||||||..+|....            .++.+|+|+++|++..+++.++|.|||||||||||+|+++++++++..     
T Consensus       199 ltRalGd~~~k~~~~------------l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~  266 (304)
T 2i0o_A          199 LSRAIGDHGYKMNKS------------LPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKP  266 (304)
T ss_dssp             CSBCEECGGGCCCTT------------SCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTST
T ss_pred             ccccccCHHHccCcc------------CCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhc
Confidence            699999999986531            123457899999999999999999999999999999999999999985     


Q ss_pred             -CCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcC
Q 046755           76 -CPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLD  127 (155)
Q Consensus        76 -~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~  127 (155)
                       ...+.+|+.|++.|+..+...               .+++.||||||||+|+
T Consensus       267 ~~~~~~~a~~L~~~a~~~~~~g---------------~~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          267 GMKLSKICEELFDHCLAPHTRG---------------DGTGCDNMTAIIVQFK  304 (304)
T ss_dssp             TCCHHHHHHHHHHHHC---------------------------CEEEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhhhcc---------------CCCCCCCeEEEEEEeC
Confidence             234568889998887532100               1357899999999974


No 4  
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.85  E-value=9.1e-22  Score=162.22  Aligned_cols=96  Identities=21%  Similarity=0.318  Sum_probs=78.5

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcC----
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNC----   76 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~----   76 (155)
                      |||||||..+|...            ..++.+|+|+++|||..+++.++| |||||||||||+|+++|+++.+...    
T Consensus       226 vtRalGd~~~k~~~------------~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~~  292 (377)
T 3d8k_A          226 MTRAFGSFDFKKGG------------QGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVS  292 (377)
T ss_dssp             CSBCSSCGGGSCC---------------CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCCC
T ss_pred             cceeecChhhhccc------------ccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhcc
Confidence            69999999999653            124567899999999999999998 8999999999999999998855532    


Q ss_pred             --CcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCcc
Q 046755           77 --PRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYL  130 (155)
Q Consensus        77 --~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~  130 (155)
                        ..+.+|+.|++.|+                     .+|+.||||||||+|....
T Consensus       293 ~~~~~~~a~~Lv~~A~---------------------~~g~~DNiTvivv~~~~~~  327 (377)
T 3d8k_A          293 PETVLDAAKAMVVNAK---------------------RRKVTKNISTFVRHLPESR  327 (377)
T ss_dssp             GGGHHHHHHHHHHTTT---------------------TSSCCSCCCEEEEECCSSC
T ss_pred             CCCHHHHHHHHHHHHH---------------------hcCCCCCEEEEEEEecCCc
Confidence              23457788888776                     4789999999999997643


No 5  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.85  E-value=2.4e-21  Score=159.90  Aligned_cols=97  Identities=28%  Similarity=0.449  Sum_probs=81.6

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCC-CCCeEEEEecccccccCChHHHHHHHHc----
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLY-PEDQFLIFASDGLWEHLSNQEAVDIVHN----   75 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~-~~d~fliLaSDGLwd~l~~~ei~~~v~~----   75 (155)
                      |||||||+.+|..+.            ..+.+|+|+++|++..+++. ++|+|||||||||||+|+++++++++..    
T Consensus       193 ltRalGd~~~K~~~~------------~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~  260 (382)
T 1a6q_A          193 VSRALGDFDYKCVHG------------KGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEV  260 (382)
T ss_dssp             CSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTT
T ss_pred             eeeecCcHhhccccc------------CCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhc
Confidence            699999999996541            12345789999999999999 7778999999999999999999999986    


Q ss_pred             -CCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCcc
Q 046755           76 -CPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYL  130 (155)
Q Consensus        76 -~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~  130 (155)
                       ...+.+|+.|++.|+.                     +|+.||||||||+|...+
T Consensus       261 ~~~~~~~a~~Lv~~A~~---------------------~g~~DNiTvivv~~~~~~  295 (382)
T 1a6q_A          261 TDDLEKVCNEVVDTCLY---------------------KGSRDNMSVILICFPNAP  295 (382)
T ss_dssp             CCCHHHHHHHHHHHHHH---------------------TTCCSCEEEEEEECTTSC
T ss_pred             CCCHHHHHHHHHHHHHh---------------------cCCcCCEEEEEEEecCCC
Confidence             2346688999998874                     678999999999997643


No 6  
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.84  E-value=1.9e-21  Score=161.37  Aligned_cols=118  Identities=22%  Similarity=0.244  Sum_probs=85.7

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEE-EeCCCCCeEEEEecccccccC--------ChHHHHH
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSV-QRLYPEDQFLIFASDGLWEHL--------SNQEAVD   71 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~-~~l~~~d~fliLaSDGLwd~l--------~~~ei~~   71 (155)
                      |||||||..+|.+......       ...+++++|+++|||.. +++.++|+|||||||||||+|        +++||++
T Consensus       239 vtRalGd~~~k~~~~~~~~-------~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~  311 (401)
T 2j4o_A          239 STRRIGDYKVKYGYTDIDL-------LSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAA  311 (401)
T ss_dssp             CSBCEECHHHHHSGGGSTT-------TTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHH
T ss_pred             cccccCCHhhccccccccc-------ccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHH
Confidence            7999999999965322111       12355678999999996 999999999999999999999        8999999


Q ss_pred             HHHc-----CCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCccc
Q 046755           72 IVHN-----CPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYLI  131 (155)
Q Consensus        72 ~v~~-----~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~~  131 (155)
                      ++..     ...+.+|+.|++.|+..+..... +-...     ....++.||||||||+|+.+..
T Consensus       312 ~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~-~G~~~-----~~~~~~~DNiTvivv~~~~~~~  370 (401)
T 2j4o_A          312 MIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFA-SGGER-----ARFCPRHEDMTLLVRNFGYPLG  370 (401)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH-SCSSG-----GGGCSEECCEEEEEEEEBCCCC
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhh-cCCcc-----cccCCCCCCeEEEEEEcCCCCc
Confidence            9986     34567899999999875532110 00000     0001248999999999976543


No 7  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.84  E-value=2e-21  Score=157.68  Aligned_cols=90  Identities=39%  Similarity=0.593  Sum_probs=75.9

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcC----
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNC----   76 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~----   76 (155)
                      |||||||..+|                     |+++++|++..+++.+.++|||||||||||+|+++||+++++..    
T Consensus       222 ~sRalGd~~~~---------------------~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~  280 (337)
T 3qn1_B          222 MSRSIGDRYLK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW  280 (337)
T ss_dssp             CSBCEECGGGT---------------------TTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc---------------------CCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhh
Confidence            68999999887                     46999999999999777779999999999999999999999751    


Q ss_pred             ------------------CcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCcccc
Q 046755           77 ------------------PRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYLIS  132 (155)
Q Consensus        77 ------------------~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~~~  132 (155)
                                        ..+.+|+.|++.|+.                     +|+.||||||||+|......
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~---------------------~g~~DNiTvivv~l~~~~~~  333 (337)
T 3qn1_B          281 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQ---------------------KGSKDNISIIVIDLKAQRKF  333 (337)
T ss_dssp             HHHHCCC----CCSSCCHHHHHHHHHHHHHHHH---------------------TTCCSCEEEEEEECCSCC--
T ss_pred             ccccccccccccccccChhHHHHHHHHHHHHHH---------------------cCCCCCEEEEEEEecCCccc
Confidence                              124578888888884                     68899999999999875443


No 8  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.84  E-value=3.9e-21  Score=151.51  Aligned_cols=89  Identities=29%  Similarity=0.482  Sum_probs=77.0

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCC-CeEEEEecccccccCChHHHHHHHHcC-Cc
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPE-DQFLIFASDGLWEHLSNQEAVDIVHNC-PR   78 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~-d~fliLaSDGLwd~l~~~ei~~~v~~~-~~   78 (155)
                      |||||||..+|..+                    |+++|++..+++.++ |+|||||||||||+|+++++++++... ..
T Consensus       175 ltralGd~~~k~~~--------------------v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~  234 (274)
T 2iq1_A          175 MTRSIGDLDLKTSG--------------------VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDP  234 (274)
T ss_dssp             CSBCEECGGGTTTT--------------------CBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSH
T ss_pred             eccccCChhhccCC--------------------EEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCH
Confidence            69999999998543                    889999999999985 569999999999999999999999875 34


Q ss_pred             chHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCcc
Q 046755           79 NGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYL  130 (155)
Q Consensus        79 ~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~  130 (155)
                      +.+|+.|++.|+.                     +|+.||||||||++....
T Consensus       235 ~~~a~~L~~~A~~---------------------~g~~DNiTvivv~~~~~~  265 (274)
T 2iq1_A          235 NEAAHAVTEQAIQ---------------------YGTEDNSTAVVVPFGAWG  265 (274)
T ss_dssp             HHHHHHHHHHHHH---------------------TTCCSCEEEEEEECTTC-
T ss_pred             HHHHHHHHHHHHH---------------------cCCCCCeEEEEEEccCCC
Confidence            6788999999985                     578999999999997643


No 9  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.84  E-value=2.5e-21  Score=158.31  Aligned_cols=116  Identities=22%  Similarity=0.294  Sum_probs=86.7

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEE-EeCCCCCeEEEEecccccccCC----------hHHH
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSV-QRLYPEDQFLIFASDGLWEHLS----------NQEA   69 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~-~~l~~~d~fliLaSDGLwd~l~----------~~ei   69 (155)
                      |||||||+.+|......       ....+.++++|+++|||.. +++.++|+|||||||||||+|+          +++|
T Consensus       225 lTRalGd~~~K~~~~~~-------~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei  297 (358)
T 2irm_A          225 STRCIGNYLGKAGYKDC-------NFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNREL  297 (358)
T ss_dssp             BSBCEECHHHHTTGGGS-------SSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHH
T ss_pred             cccCCcCHHHhcccccc-------ccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHH
Confidence            69999999988532110       0112345678999999995 9999999999999999999999          9999


Q ss_pred             HHHHHcC-----CcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCc--cCCceEEEEEEcCCc
Q 046755           70 VDIVHNC-----PRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRH--FHDDITVIILFLDSY  129 (155)
Q Consensus        70 ~~~v~~~-----~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg--~~DNiTvivv~l~~~  129 (155)
                      ++++...     ..+.+|+.|++.|+..+...+ +..     ...+..||  +.||||||||+|+.+
T Consensus       298 ~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~-~~~-----~~~~~~~Gg~~~DNiTvivv~~~~p  358 (358)
T 2irm_A          298 VRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTY-MQL-----VEEHRSVTFNSRDDVTLLIRNFNYA  358 (358)
T ss_dssp             HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHH-HHH-----HSSSCCCCCCEECCEEEEEEESCC-
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhh-ccc-----cccccccCCCCCCCeEEEEEeCCCC
Confidence            9999863     446789999999987654321 110     11223467  899999999999753


No 10 
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.84  E-value=3.9e-21  Score=154.53  Aligned_cols=89  Identities=36%  Similarity=0.617  Sum_probs=73.5

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcC----
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNC----   76 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~----   76 (155)
                      |||+|||..+|                     |+++++|++..+.+.+.++|||||||||||+|+++|++++++..    
T Consensus       193 ~sRalGd~~~~---------------------~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~  251 (316)
T 3kdj_B          193 MSRSIGDRYLK---------------------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLW  251 (316)
T ss_dssp             CSBCEECGGGT---------------------TTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred             cccccCccccC---------------------CCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhh
Confidence            68999999887                     46899999999986655669999999999999999999999751    


Q ss_pred             ------------------------CcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCccc
Q 046755           77 ------------------------PRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYLI  131 (155)
Q Consensus        77 ------------------------~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~~  131 (155)
                                              ..+.+|+.|++.|+.                     +|+.||||||||++.....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~---------------------~g~~DNiTvivv~l~~~~~  309 (316)
T 3kdj_B          252 HKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQ---------------------RGSKDNISVVVVDLKPRRK  309 (316)
T ss_dssp             TTC-----------------CCCHHHHHHHHHHHHHHHH---------------------TTCCSCEEEEEEECSCC--
T ss_pred             ccccccccccccccccccccccCchHHHHHHHHHHHHHH---------------------cCCCCCeEEEEEEccCCCc
Confidence                                    123578888888874                     6889999999999986543


No 11 
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.83  E-value=5.5e-21  Score=153.68  Aligned_cols=96  Identities=26%  Similarity=0.419  Sum_probs=76.9

Q ss_pred             Ccccccc----ccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcC
Q 046755            1 ISRSIGD----AYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNC   76 (155)
Q Consensus         1 vSRa~GD----~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~   76 (155)
                      +||||||    ..+|+...           ....++|+|+++||+..+++.++|+|||||||||||+|+++|+++++...
T Consensus       216 ~sra~Gd~p~~~~~~~~~g-----------~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~  284 (324)
T 2i44_A          216 FRKSRGEQPMQLQYSRAFG-----------GKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQA  284 (324)
T ss_dssp             HHHHTTCCCCCBSSSBCEE-----------CGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred             chhhcCCccccceeccccC-----------CccccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHH
Confidence            4799999    55553210           11225678999999999999999889999999999999999999999763


Q ss_pred             -----Ccch--HHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCC
Q 046755           77 -----PRNG--VARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDS  128 (155)
Q Consensus        77 -----~~~~--~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~  128 (155)
                           ..+.  +|+.|++.|+                     .+|+.||||||||+|+.
T Consensus       285 ~~~~~~~~~~~~a~~L~~~A~---------------------~~g~~DNiTvivv~~~~  322 (324)
T 2i44_A          285 RQEGRNPAQALVEMTLAEQQS---------------------RNQSADNITAMTVFFKK  322 (324)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHH---------------------TTCCCCCEEEEEEEEC-
T ss_pred             HhcCCCHHHHHHHHHHHHHHH---------------------hcCCCCCCEEEEEEeeC
Confidence                 3455  7888888887                     37889999999999964


No 12 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.81  E-value=3.5e-20  Score=153.09  Aligned_cols=90  Identities=29%  Similarity=0.469  Sum_probs=77.8

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCC-CeEEEEecccccccCChHHHHHHHHcC-Cc
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPE-DQFLIFASDGLWEHLSNQEAVDIVHNC-PR   78 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~-d~fliLaSDGLwd~l~~~ei~~~v~~~-~~   78 (155)
                      |||||||..+|..+                    ++++|++..+++..+ |+|||||||||||+|+++++++++... ..
T Consensus       289 ltRalGd~~~k~~~--------------------v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~  348 (389)
T 4da1_A          289 MTRSIGDLDLKTSG--------------------VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDP  348 (389)
T ss_dssp             CSBCEECGGGGGGT--------------------CBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSH
T ss_pred             eEeeeCChhhccCC--------------------CCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCH
Confidence            69999999998654                    889999999999875 679999999999999999999999874 45


Q ss_pred             chHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCccc
Q 046755           79 NGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYLI  131 (155)
Q Consensus        79 ~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~~  131 (155)
                      +.+|+.|++.|+.                     +|+.||||||||+|.....
T Consensus       349 ~~~a~~Lv~~A~~---------------------~g~~DNiTvivv~~~~~~~  380 (389)
T 4da1_A          349 NEAAHAVTEQAIQ---------------------YGTEDNSTAVVVPFGAWGK  380 (389)
T ss_dssp             HHHHHHHHHHHHH---------------------HTCCSCEEEEEEEECCC--
T ss_pred             HHHHHHHHHHHHH---------------------cCCCCCeEEEEEEecCCCC
Confidence            6789999999985                     5679999999999976543


No 13 
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.81  E-value=2.5e-20  Score=152.93  Aligned_cols=96  Identities=23%  Similarity=0.303  Sum_probs=77.1

Q ss_pred             CccccccccccccccCCCCCCCCCCCCCCCCCCceeccceeEEEeCCCCCeEEEEecccccccCC--hHHHHHHHHc---
Q 046755            1 ISRSIGDAYLKKVEFNREPLLPKFRLPEPFHKPILLAEPTVSVQRLYPEDQFLIFASDGLWEHLS--NQEAVDIVHN---   75 (155)
Q Consensus         1 vSRa~GD~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~--~~ei~~~v~~---   75 (155)
                      |||||||..+|....            ..+..++|+++||+..+++.++| |||||||||||+++  ++++++++..   
T Consensus       233 ltRalGd~~~k~~~~------------l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~  299 (364)
T 2isn_A          233 LSRAFGDSDFKMNPN------------LPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAEMQ  299 (364)
T ss_dssp             CSBCEECGGGSCCCS------------SCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHHHH
T ss_pred             eEEEecchhhccccc------------cCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHHHh
Confidence            699999999985321            11234679999999999999998 99999999999976  8888876532   


Q ss_pred             ---CCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCCceEEEEEEcCCcc
Q 046755           76 ---CPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSYL  130 (155)
Q Consensus        76 ---~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvivv~l~~~~  130 (155)
                         ...+.+|+.|++.|+.                     +++.||||||||+|....
T Consensus       300 ~~~~~~~~~a~~Lv~~A~~---------------------~g~~DNiTvivv~~~~~~  336 (364)
T 2isn_A          300 RSKGDLEEVAARVMDYAYD---------------------MNSQDNISVMLVAFHNQE  336 (364)
T ss_dssp             HTTSCHHHHHHHHHHHHHH---------------------TTCCSCEEEEEEEECSSC
T ss_pred             hcCCCHHHHHHHHHHHHHh---------------------cCCCCCEEEEEEEcCCCC
Confidence               2346788999999985                     678999999999997654


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.72  E-value=9.8e-18  Score=129.60  Aligned_cols=71  Identities=31%  Similarity=0.462  Sum_probs=62.2

Q ss_pred             eccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcC-CcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCc
Q 046755           36 LAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNC-PRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRH  114 (155)
Q Consensus        36 ~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~-~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg  114 (155)
                      .++|++..+++.++| +||||||||||+++++++++++... ..+.+++.|++.|+.                     ++
T Consensus       176 ~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~a~~---------------------~g  233 (250)
T 2pk0_A          176 PVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANH---------------------RG  233 (250)
T ss_dssp             CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHHHHH---------------------TT
T ss_pred             CccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHHHHH---------------------cC
Confidence            368999999999998 8999999999999999999999875 446688899888874                     56


Q ss_pred             cCCceEEEEEEcCC
Q 046755          115 FHDDITVIILFLDS  128 (155)
Q Consensus       115 ~~DNiTvivv~l~~  128 (155)
                      +.|||||||+++..
T Consensus       234 ~~DniTvivv~~~~  247 (250)
T 2pk0_A          234 GLDNITVALVYVES  247 (250)
T ss_dssp             CCSCEEEEEEEECC
T ss_pred             CCCCeEEEEEEeeC
Confidence            79999999999974


No 15 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.71  E-value=2.4e-17  Score=126.22  Aligned_cols=69  Identities=28%  Similarity=0.280  Sum_probs=59.4

Q ss_pred             eccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCcc
Q 046755           36 LAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNCPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHF  115 (155)
Q Consensus        36 ~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~  115 (155)
                      .++|++..+++.++| +||||||||||+++++++++++.....+.+|+.|++.|+.                     +++
T Consensus       165 ~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~~~~~~~~~a~~l~~~a~~---------------------~g~  222 (234)
T 2jfr_A          165 HIGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVAND---------------------AGG  222 (234)
T ss_dssp             CCCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHHTCSSHHHHHHHHHHHHHH---------------------TTC
T ss_pred             CceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHHccCCHHHHHHHHHHHHHH---------------------cCC
Confidence            478999999999998 7899999999999999999999323456788899988874                     567


Q ss_pred             CCceEEEEEEc
Q 046755          116 HDDITVIILFL  126 (155)
Q Consensus       116 ~DNiTvivv~l  126 (155)
                      .||||++|+++
T Consensus       223 ~DniTvivv~~  233 (234)
T 2jfr_A          223 SDNTTVVVIDL  233 (234)
T ss_dssp             CSCEEEEEEEE
T ss_pred             CCCeEEEEEEe
Confidence            99999999987


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.70  E-value=2.5e-17  Score=126.49  Aligned_cols=69  Identities=28%  Similarity=0.326  Sum_probs=59.5

Q ss_pred             eccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCcc
Q 046755           36 LAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNCPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHF  115 (155)
Q Consensus        36 ~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~  115 (155)
                      .++|++..+++.++| +||||||||||+++++++.+++.....+.+++.|++.|+.                     +++
T Consensus       172 ~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~l~~~~~~~~a~~l~~~a~~---------------------~g~  229 (240)
T 2j82_A          172 LSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISIYLSEPNVQKAAAALVDAAKT---------------------HGG  229 (240)
T ss_dssp             CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTCSSHHHHHHHHHHHHHH---------------------TTC
T ss_pred             ceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHHHccCCHHHHHHHHHHHHHH---------------------cCC
Confidence            468999999999998 7999999999999999999999833446688889888874                     567


Q ss_pred             CCceEEEEEEc
Q 046755          116 HDDITVIILFL  126 (155)
Q Consensus       116 ~DNiTvivv~l  126 (155)
                      .||||+||+++
T Consensus       230 ~DniTvivv~~  240 (240)
T 2j82_A          230 RDNVTVVVISV  240 (240)
T ss_dssp             CSCEEEEEEEC
T ss_pred             CCCeEEEEEeC
Confidence            89999999975


No 17 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.70  E-value=2.6e-17  Score=126.25  Aligned_cols=70  Identities=24%  Similarity=0.355  Sum_probs=62.5

Q ss_pred             eccceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCcc
Q 046755           36 LAEPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNCPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHF  115 (155)
Q Consensus        36 ~~~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~  115 (155)
                      .++|++..+++.++| +||||||||||+++++++++++.....+.+|+.|++.|+.                     +++
T Consensus       167 ~~~p~~~~~~l~~~d-~lvl~SDGl~d~l~~~~i~~~~~~~~~~~~a~~L~~~a~~---------------------~g~  224 (237)
T 1txo_A          167 EVEPTLTMREARAGD-RYLLCSDGLSDPVSDETILEALQIPEVAESAHRLIELALR---------------------GGG  224 (237)
T ss_dssp             CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTSSSHHHHHHHHHHHHHH---------------------TTC
T ss_pred             CccceEEEEecCCCC-EEEEECCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHH---------------------cCC
Confidence            478999999999998 6799999999999999999999876667789999999874                     577


Q ss_pred             CCceEEEEEEcC
Q 046755          116 HDDITVIILFLD  127 (155)
Q Consensus       116 ~DNiTvivv~l~  127 (155)
                      .|||||||+++.
T Consensus       225 ~DniTvivv~~~  236 (237)
T 1txo_A          225 PDNVTVVVADLE  236 (237)
T ss_dssp             CSCEEEEEEEEE
T ss_pred             CCCeEEEEEEee
Confidence            999999999985


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.61  E-value=1.2e-16  Score=121.51  Aligned_cols=65  Identities=17%  Similarity=0.301  Sum_probs=50.9

Q ss_pred             cccee--EEEeCCCCCeEEEEecccccccCChHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCc
Q 046755           37 AEPTV--SVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNCPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRH  114 (155)
Q Consensus        37 ~~Pdv--~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg  114 (155)
                      .+|++  ..+++.++| +||||||||||+++++++.+++.....   |+.|++.|+.                     ++
T Consensus       143 ~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~~~~---a~~L~~~a~~---------------------~g  197 (211)
T 3rnr_A          143 TEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRIAMALSRGSD---ARGILQEVEA---------------------QG  197 (211)
T ss_dssp             CCCEECSSCEECCTTC-EEEEEEC-----CCTTEEEEEECTTSC---HHHHHHHHHH---------------------SC
T ss_pred             cceeEecceecCCCCC-EEEEEcCCCCCCcCHHHHHHHHhcCCh---HHHHHHHHHH---------------------cC
Confidence            46888  778999999 778999999999999999999876543   8999988874                     45


Q ss_pred             --cCCceEEEEEEc
Q 046755          115 --FHDDITVIILFL  126 (155)
Q Consensus       115 --~~DNiTvivv~l  126 (155)
                        +.||||++||+|
T Consensus       198 ~~~~DNiTvivv~L  211 (211)
T 3rnr_A          198 RPYQDNATLALVIL  211 (211)
T ss_dssp             TTSCSSCEEEEEEC
T ss_pred             CCCCCceEEEEEeC
Confidence              789999999986


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=98.93  E-value=1.9e-09  Score=82.60  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=54.8

Q ss_pred             cceeEEEeCCCCCeEEEEecccccccCC-----hHHHHHHHHcC---CcchHHHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 046755           38 EPTVSVQRLYPEDQFLIFASDGLWEHLS-----NQEAVDIVHNC---PRNGVARKLVKAALHEAAKKREMRYSDLKKIDR  109 (155)
Q Consensus        38 ~Pdv~~~~l~~~d~fliLaSDGLwd~l~-----~~ei~~~v~~~---~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~  109 (155)
                      +++...+++.++| .|+||||||||.++     ...+.+++...   ..++.++.|++.+.....               
T Consensus       142 ~~~~~~~~l~~GD-~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~~~~~~---------------  205 (242)
T 3t91_A          142 DVEVVSEQLKAGD-LLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRS---------------  205 (242)
T ss_dssp             CEEEEEEECCTTC-EEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHTT---------------
T ss_pred             cceEEEEEeCCCC-EEEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC---------------
Confidence            4556778899999 78899999999998     56667777643   334567777777764210               


Q ss_pred             cCCCccCCceEEEEEEcCCcccccCC
Q 046755          110 GVRRHFHDDITVIILFLDSYLISRSS  135 (155)
Q Consensus       110 ~~~rg~~DNiTvivv~l~~~~~~~~~  135 (155)
                         ....||||++++++.........
T Consensus       206 ---~~~~DDiTvv~i~~~~~~~~~~~  228 (242)
T 3t91_A          206 ---GQIEDDMTVVVVRIDHNTPKWAS  228 (242)
T ss_dssp             ---SCCCSCEEEEEEEEEECCCCC--
T ss_pred             ---CCCCCceEEEEEEEecCCCccee
Confidence               11379999999999765443333


No 20 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.70  E-value=1.4e-08  Score=75.85  Aligned_cols=63  Identities=16%  Similarity=0.158  Sum_probs=49.4

Q ss_pred             cceeEEEeCCCCCeEEEEecccccccCChHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhccccCCCccCC
Q 046755           38 EPTVSVQRLYPEDQFLIFASDGLWEHLSNQEAVDIVHNCPRNGVARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHD  117 (155)
Q Consensus        38 ~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~ei~~~v~~~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~~~~~rg~~D  117 (155)
                      +++...+++.++| .|+|+||||+|.++.+++..++. ...++.|+.|++.+.                       +..|
T Consensus       131 ~~~~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~~~~-~~~~~~a~~l~~~~~-----------------------~~~D  185 (193)
T 3zt9_A          131 QLLIAKGSYQEGD-LFLIHSDGIQEGAVPLALLANYR-LTAEELVRLIGEKYG-----------------------RRDD  185 (193)
T ss_dssp             SCCCEEEECCTTC-EEEEECTTSCTTCSCGGGGGCTT-SCHHHHHHHHHHHHC-----------------------CTTS
T ss_pred             cceeEEeccCCCC-EEEEECCCCCCccChhhhhchhc-CCHHHHHHHHHHHhC-----------------------cCCC
Confidence            4566788999999 88899999999999998877653 344667777777652                       2489


Q ss_pred             ceEEEEEE
Q 046755          118 DITVIILF  125 (155)
Q Consensus       118 NiTvivv~  125 (155)
                      |+|++|++
T Consensus       186 d~tvlv~r  193 (193)
T 3zt9_A          186 DVAVIVAR  193 (193)
T ss_dssp             CEEEEEEC
T ss_pred             CeEEEEEC
Confidence            99999985


No 21 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=98.69  E-value=3.8e-08  Score=75.78  Aligned_cols=73  Identities=27%  Similarity=0.300  Sum_probs=51.7

Q ss_pred             cceeEEEeCCCCCeEEEEecccccccCCh-------HHHHHHHHc--CCcchHHHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046755           38 EPTVSVQRLYPEDQFLIFASDGLWEHLSN-------QEAVDIVHN--CPRNGVARKLVKAALHEAAKKREMRYSDLKKID  108 (155)
Q Consensus        38 ~Pdv~~~~l~~~d~fliLaSDGLwd~l~~-------~ei~~~v~~--~~~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~  108 (155)
                      +++...+++.++| .|+|+||||+|..+.       +++..++..  ...++.++.|++.+.....              
T Consensus       145 ~~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~--------------  209 (242)
T 3pu9_A          145 RPRVLEFPAEPGL-TVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIADELLEAALVADD--------------  209 (242)
T ss_dssp             CCEEEEEECCTTC-EEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHTT--------------
T ss_pred             CceEEEEEeCCCC-EEEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHHHHHHHHHHHhcC--------------
Confidence            4566788899999 888999999987654       677555432  2335577777777765321              


Q ss_pred             ccCCCccCCceEEEEEEcCCc
Q 046755          109 RGVRRHFHDDITVIILFLDSY  129 (155)
Q Consensus       109 ~~~~rg~~DNiTvivv~l~~~  129 (155)
                          ....||||++++++.++
T Consensus       210 ----~~~~DDiTvlvv~~~~~  226 (242)
T 3pu9_A          210 ----GRAGDDMTVVVLRLRNV  226 (242)
T ss_dssp             ----TSCSSCEEEEEEEEEEC
T ss_pred             ----CCCCCCeEEEEEEEecC
Confidence                12489999999998543


No 22 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.49  E-value=8.6e-08  Score=73.91  Aligned_cols=67  Identities=22%  Similarity=0.226  Sum_probs=41.6

Q ss_pred             cceeEEEeCCCCCeEEEEecccccccCChHH-------HHHHHHcCC--cchHHHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046755           38 EPTVSVQRLYPEDQFLIFASDGLWEHLSNQE-------AVDIVHNCP--RNGVARKLVKAALHEAAKKREMRYSDLKKID  108 (155)
Q Consensus        38 ~Pdv~~~~l~~~d~fliLaSDGLwd~l~~~e-------i~~~v~~~~--~~~~a~~L~~~a~~~~~~~~~~~~~~~~~~~  108 (155)
                      +++...+++.++| .|+||||||+|.++.++       +.+++....  .+..++.+. .+.                  
T Consensus       178 ~~~~~~~~l~~gd-~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~l~-~~~------------------  237 (255)
T 3f79_A          178 TYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFG-LAN------------------  237 (255)
T ss_dssp             CCCC---BCCSSE-EEEEECSCCCCCSCC---CCTTTSSHHHHHHHSCSSHHHHHHC-----------------------
T ss_pred             ceEEEEEEECCCC-EEEEECCCcCcccCCCcchhhHHHHHHHHHhcCCCHHHHHHHHH-hcc------------------
Confidence            3455677888988 88899999999999877       777776432  223333332 111                  


Q ss_pred             ccCCCccCCceEEEEEEcC
Q 046755          109 RGVRRHFHDDITVIILFLD  127 (155)
Q Consensus       109 ~~~~rg~~DNiTvivv~l~  127 (155)
                         .++..||||+++++..
T Consensus       238 ---~~~~~DDiTvl~v~~~  253 (255)
T 3f79_A          238 ---LAEMPDDIALLVLSRN  253 (255)
T ss_dssp             ----CCSSSCEEEEEEEEC
T ss_pred             ---CCCCCCCEEEEEEEec
Confidence               2466899999999864


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=97.90  E-value=5.1e-05  Score=62.33  Aligned_cols=75  Identities=20%  Similarity=0.261  Sum_probs=52.1

Q ss_pred             cceeEEEeCCCCCeEEEEecccccccCCh------HHHHHHHHcC----------CcchHHHHHHHHHHHHHHHhhhhhh
Q 046755           38 EPTVSVQRLYPEDQFLIFASDGLWEHLSN------QEAVDIVHNC----------PRNGVARKLVKAALHEAAKKREMRY  101 (155)
Q Consensus        38 ~Pdv~~~~l~~~d~fliLaSDGLwd~l~~------~ei~~~v~~~----------~~~~~a~~L~~~a~~~~~~~~~~~~  101 (155)
                      ..+...+.+.++| .|+|+||||.|..+.      +.+.+++.+.          .....++.+++.+++.....     
T Consensus       169 ~~~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----  242 (399)
T 3ke6_A          169 GFPVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRS-----  242 (399)
T ss_dssp             CCCCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHHHT-----
T ss_pred             CceeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhccC-----
Confidence            3455678899999 888999999998775      4566666541          12345677777776643321     


Q ss_pred             hhhhhccccCCCccCCceEEEEEEcCCc
Q 046755          102 SDLKKIDRGVRRHFHDDITVIILFLDSY  129 (155)
Q Consensus       102 ~~~~~~~~~~~rg~~DNiTvivv~l~~~  129 (155)
                                 .+..||||++++++..+
T Consensus       243 -----------~~~~DDitvl~vr~~~~  259 (399)
T 3ke6_A          243 -----------TGYNDDVTLLAMQRRAP  259 (399)
T ss_dssp             -----------TCCSSCEEEEEEEECCC
T ss_pred             -----------CCCCCceEEEEEEeeCC
Confidence                       24589999999998763


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=96.22  E-value=0.0025  Score=51.46  Aligned_cols=26  Identities=31%  Similarity=0.310  Sum_probs=18.8

Q ss_pred             eeEEEeCCCCCeEEEEecccccccCCh
Q 046755           40 TVSVQRLYPEDQFLIFASDGLWEHLSN   66 (155)
Q Consensus        40 dv~~~~l~~~d~fliLaSDGLwd~l~~   66 (155)
                      +...+.+.++| .|+|.||||.|..+.
T Consensus       319 ~~~~~~l~~gd-~l~l~TDG~~e~~~~  344 (394)
T 3eq2_A          319 DDRVMELPPSF-SLSLFSDGILDVLPG  344 (394)
T ss_dssp             CCEEEECCSSC-EEEECSSCCCC----
T ss_pred             EEEEEEeCCCC-EEEEECCCcccccCc
Confidence            34567888999 889999999997554


No 25 
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=36.70  E-value=30  Score=22.41  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=26.4

Q ss_pred             ceeccceeEEEeCC--CCCeEEEEecccccccCChHHHHHHHHc
Q 046755           34 ILLAEPTVSVQRLY--PEDQFLIFASDGLWEHLSNQEAVDIVHN   75 (155)
Q Consensus        34 ~v~~~Pdv~~~~l~--~~d~fliLaSDGLwd~l~~~ei~~~v~~   75 (155)
                      +|...+...-+.+.  ... -+|+-+.||.+.++++|+..++..
T Consensus        47 ~v~~~~~~NAf~~g~~~~~-~~i~v~~gLl~~l~~~El~aVlaH   89 (107)
T 3cqb_A           47 AIYDSADINAFATGAKRDD-SLVAVSTGLLHNMTRDEAEAVLAH   89 (107)
T ss_dssp             EEECCSSEEEEEECCC--C-CEEEEEHHHHHHSCHHHHHHHHHH
T ss_pred             EEEECCCcCEEEEecCCCC-CEEEEcHHHHhhCCHHHHHHHHHH
Confidence            34444444444333  222 356888999999999999988864


No 26 
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=35.49  E-value=19  Score=22.53  Aligned_cols=28  Identities=29%  Similarity=0.429  Sum_probs=19.1

Q ss_pred             CCCceeccceeEEEeCCCCCeEEEEeccccc
Q 046755           31 HKPILLAEPTVSVQRLYPEDQFLIFASDGLW   61 (155)
Q Consensus        31 ~~p~v~~~Pdv~~~~l~~~d~fliLaSDGLw   61 (155)
                      .+|-.+.-|.   .....++++|+-++||++
T Consensus        15 ~~p~~~~~p~---~~f~eGeDVLarwsDGlf   42 (79)
T 2m0o_A           15 ASPAPTSGPR---PRLWEGQDVLARWTDGLL   42 (79)
T ss_dssp             SSCCCCCSCC---CCCCTTCEEEBCCTTSCC
T ss_pred             CCCCCccCCc---ceeccCCEEEEEecCCCE
Confidence            3444444455   356678878888999996


No 27 
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=25.95  E-value=41  Score=19.81  Aligned_cols=17  Identities=35%  Similarity=0.509  Sum_probs=13.3

Q ss_pred             eCCCCCeEEEEeccccc
Q 046755           45 RLYPEDQFLIFASDGLW   61 (155)
Q Consensus        45 ~l~~~d~fliLaSDGLw   61 (155)
                      .+..++++|+-.|||++
T Consensus         3 ~f~~GedVLarwsDG~f   19 (58)
T 4hcz_A            3 RLWEGQDVLARWTDGLL   19 (58)
T ss_dssp             SCCTTCEEEEECTTSCE
T ss_pred             ccccCCEEEEEecCCCE
Confidence            35677778888999986


No 28 
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=24.71  E-value=43  Score=20.43  Aligned_cols=18  Identities=17%  Similarity=0.298  Sum_probs=14.7

Q ss_pred             EeCCCCCeEEEEeccccc
Q 046755           44 QRLYPEDQFLIFASDGLW   61 (155)
Q Consensus        44 ~~l~~~d~fliLaSDGLw   61 (155)
                      .....++++|+=++||++
T Consensus        14 ~~~~~geDVL~rw~DG~f   31 (69)
T 2xk0_A           14 VTYALQEDVFIKCNDGRF   31 (69)
T ss_dssp             CCCCTTCEEEEECTTSCE
T ss_pred             cccccCCeEEEEecCCCE
Confidence            456677779999999986


No 29 
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=21.98  E-value=55  Score=24.46  Aligned_cols=39  Identities=13%  Similarity=0.345  Sum_probs=27.8

Q ss_pred             ceeccceeEEEeCCCCCeEEEEecccccccC-ChHHHHHHHHc
Q 046755           34 ILLAEPTVSVQRLYPEDQFLIFASDGLWEHL-SNQEAVDIVHN   75 (155)
Q Consensus        34 ~v~~~Pdv~~~~l~~~d~fliLaSDGLwd~l-~~~ei~~~v~~   75 (155)
                      +|+..|++.-+-+ ++.  .|+-++||.+.+ +++|+..++..
T Consensus        67 ~v~~~~~~NAfa~-~gg--~I~v~~gLl~~l~~~~ELaaVLaH  106 (253)
T 3c37_A           67 KVVKDDSVNAFAI-PGG--RVYVHTGLLKAADNETELAGVLAH  106 (253)
T ss_dssp             EEECCCSCCEEEE-TTT--EEEEEHHHHHHCSSHHHHHHHHHH
T ss_pred             EEEeCCCCCeeEc-CCC--eEEeeHHHHhhCCCHHHHHHHHHH
Confidence            4555666655544 333  457788999999 88999888865


Done!