Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>046773
DGNGNGNGSGGVGGHYGARRGGDFEGPSSSRQRRRAVNEVWPEPFVEALAAQVAIEASRS
VGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRIWGRTNLLHATWRDEYIYRHRTAQ
NFRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTF
RPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVL
IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRV
RVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQ
NRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSF
RERIGEEVIAFVGDDRHVAASCGTNIHLWDFGA

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046773
        (453 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2177271 - symbol:SAP "STERILE APETALA" species...  1347  1.3e-137  1


>TAIR|locus:2177271 [details] [associations]
            symbol:SAP "STERILE APETALA" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0009554 "megasporogenesis" evidence=IMP]
            [GO:0009908 "flower development" evidence=IMP] InterPro:IPR017986
            InterPro:IPR015943 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0030154 Gene3D:2.130.10.10
            SUPFAM:SSF50978 GO:GO:0003700 GO:GO:0006351 GO:GO:0009908
            EMBL:AB011485 GO:GO:0009554 EMBL:AJ223125 IPI:IPI00528742
            PIR:T51368 RefSeq:NP_198426.1 UniGene:At.416
            ProteinModelPortal:Q9FKH1 SMR:Q9FKH1 STRING:Q9FKH1
            EnsemblPlants:AT5G35770.1 GeneID:833556 KEGG:ath:AT5G35770
            GeneFarm:1665 TAIR:At5g35770 eggNOG:NOG329123 HOGENOM:HOG000154254
            InParanoid:Q9FKH1 OMA:HLWDFGA PhylomeDB:Q9FKH1
            ProtClustDB:CLSN2686505 Genevestigator:Q9FKH1 GermOnline:AT5G35770
            Uniprot:Q9FKH1
        Length = 446

 Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
 Identities = 263/437 (60%), Positives = 322/437 (73%)

Query:    24 FEGPSSSRQRRRAVNEVWPEPFVEALAAQVAIEASRSVGRXXXXXXXXNVFQVCSTWRAV 83
             FE PS SR RR A N+VWPEPF+E+LA QVA+ AS S G         NVF+VC+TW AV
Sbjct:    19 FEAPSPSRPRRGA-NDVWPEPFLESLAVQVAVNASTSAGLLAAAPALANVFRVCTTWHAV 77

Query:    84 SRSDLLWHRLTRRIWGRTNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDNPD 143
             SRSD LW  L+R++W RT+L+H TWRDE+IYRHRTA+NFRTR +T+F L FDPSDVD PD
Sbjct:    78 SRSDHLWQLLSRQVWARTHLMHDTWRDEFIYRHRTARNFRTRTHTYFTLQFDPSDVDEPD 137

Query:   144 GLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDS 203
              L+CRCLTLSDLYLA GFADG VRLF L  RLHVRT RP   DR G+FSRAVSGI+I+DS
Sbjct:   138 SLSCRCLTLSDLYLAAGFADGTVRLFLLNNRLHVRTLRPPLRDRFGRFSRAVSGIVISDS 197

Query:   204 QLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFH 263
             +L FAT+DGDIHVA ID V + TRTA+ G +++DG L+DFTGC R+WVGL+AG+ GRAFH
Sbjct:   198 RLTFATMDGDIHVAEIDGVGH-TRTAYAGDIVNDGALVDFTGCGRWWVGLFAGVPGRAFH 256

Query:   264 IWDRQAEEV-FVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLR 322
             IWD  +EE  FVGG LTD   VMGW  LTE T  +GR+R++ +E+AVACT  R++  DLR
Sbjct:   257 IWDCNSEETTFVGGTLTDPEAVMGWHTLTELTTSLGRLRISGNETAVACTRWRIMVIDLR 316

Query:   323 NQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL 381
             NQG+++GE     RGL VT  D N EAY+ +++R   N     A VRRV+T + VC F +
Sbjct:   317 NQGVIIGEDEEQRRGLIVTGFDANDEAYVRLDSRG--N-----ASVRRVNTQQTVCEFRV 369

Query:   382 RADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHVAAS 441
                    VMGC+N+ +ALMC  G++RVWEVE GEY+YS RER+GE V A V DDRHVA +
Sbjct:   370 SGAAQRRVMGCVNRLHALMCAGGIMRVWEVERGEYLYSIRERVGE-VDAIVADDRHVAVA 428

Query:   442 CGTN-----IHLWDFGA 453
               ++     IHLWDFGA
Sbjct:   429 SASSTAQSIIHLWDFGA 445


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.138   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      453       424   0.00084  118 3  11 22  0.46    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  287 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.39u 0.10s 32.49t   Elapsed:  00:00:02
  Total cpu time:  32.39u 0.10s 32.49t   Elapsed:  00:00:02
  Start:  Thu May  9 23:12:27 2013   End:  Thu May  9 23:12:29 2013

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