BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046773
(453 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKH1|SAP_ARATH Transcriptional regulator STERILE APETALA OS=Arabidopsis thaliana
GN=SAP PE=1 SV=1
Length = 446
Score = 513 bits (1321), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/454 (60%), Positives = 335/454 (73%), Gaps = 25/454 (5%)
Query: 7 NGSGGVGGHYGARRGGDFEGPSSSRQRRRAVNEVWPEPFVEALAAQVAIEASRSVGRLAA 66
NG+GG GG FE PS SR RR A N+VWPEPF+E+LA QVA+ AS S G LAA
Sbjct: 10 NGAGG--------SGGVFEAPSPSRPRRGA-NDVWPEPFLESLAVQVAVNASTSAGLLAA 60
Query: 67 AAALANVFQVCSTWRAVSRSDLLWHRLTRRIWGRTNLLHATWRDEYIYRHRTAQNFRTRR 126
A ALANVF+VC+TW AVSRSD LW L+R++W RT+L+H TWRDE+IYRHRTA+NFRTR
Sbjct: 61 APALANVFRVCTTWHAVSRSDHLWQLLSRQVWARTHLMHDTWRDEFIYRHRTARNFRTRT 120
Query: 127 YTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSD 186
+T+F L FDPSDVD PD L+CRCLTLSDLYLA GFADG VRLF L RLHVRT RP D
Sbjct: 121 HTYFTLQFDPSDVDEPDSLSCRCLTLSDLYLAAGFADGTVRLFLLNNRLHVRTLRPPLRD 180
Query: 187 RLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGC 246
R G+FSRAVSGI+I+DS+L FAT+DGDIHVA ID V + TRTA+ G +++DG L+DFTGC
Sbjct: 181 RFGRFSRAVSGIVISDSRLTFATMDGDIHVAEIDGVGH-TRTAYAGDIVNDGALVDFTGC 239
Query: 247 SRYWVGLYAGLAGRAFHIWDRQAEE-VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH 305
R+WVGL+AG+ GRAFHIWD +EE FVGG LTD VMGW LTE T +GR+R++ +
Sbjct: 240 GRWWVGLFAGVPGRAFHIWDCNSEETTFVGGTLTDPEAVMGWHTLTELTTSLGRLRISGN 299
Query: 306 ESAVACTSSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRL 364
E+AVACT R++ DLRNQG+++GE RGL VT D N EAY+ +++R
Sbjct: 300 ETAVACTRWRIMVIDLRNQGVIIGEDEEQRRGLIVTGFDANDEAYVRLDSRG-------N 352
Query: 365 AIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERI 424
A VRRV+T + VC F + VMGC+N+ +ALMC G++RVWEVE GEY+YS RER+
Sbjct: 353 ASVRRVNTQQTVCEFRVSGAAQRRVMGCVNRLHALMCAGGIMRVWEVERGEYLYSIRERV 412
Query: 425 GEEVIAFVGDDRHVAASCGTN-----IHLWDFGA 453
G EV A V DDRHVA + ++ IHLWDFGA
Sbjct: 413 G-EVDAIVADDRHVAVASASSTAQSIIHLWDFGA 445
>sp|C5FP68|SCONB_ARTOC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)
GN=sconB PE=3 SV=1
Length = 674
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 77/209 (36%), Gaps = 57/209 (27%)
Query: 45 FVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRL----------- 93
FV AL +++ + + A+L N QV WR ++ D++WHR+
Sbjct: 214 FVTALPPEISFK----ILSYLDTASLCNAAQVSRNWRHLADDDVVWHRMCEQHIDRKCEK 269
Query: 94 ---------------TRR-----------IWGRTNLLHATWRDEYIYRHRTAQNFRTRRY 127
T+R + GR H W+ Y+ R + N++ R
Sbjct: 270 CGWGLPMLDRKRLKDTKRQVQLRAAGKEAVTGRQQQQHRPWKAVYMDRFKVGTNWKYGRC 329
Query: 128 THFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDR 187
T + V CL D LA G D ++++D+ T +RT R S
Sbjct: 330 TTTIFRGHTNGV--------MCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHES-- 379
Query: 188 LGQFSRAVSGIIITDSQLIFATLDGDIHV 216
+ + D++LI +LD I V
Sbjct: 380 ------TIRCLQFDDTKLISGSLDRTIKV 402
>sp|D4D8P3|SCONB_TRIVH Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Trichophyton verrucosum (strain HKI 0517) GN=sconB
PE=3 SV=1
Length = 663
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 77/216 (35%), Gaps = 70/216 (32%)
Query: 45 FVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRI------- 97
FV AL +++ + + A+L + QV +WRA++ D++WHR+ +
Sbjct: 197 FVTALPPEISFK----ILSYLDTASLCSAAQVSHSWRALADDDVVWHRMCEQHIDRKCEK 252
Query: 98 --WG-----------------------------RTNLLHATWRDEYIYRHRTAQNFRTRR 126
WG R H W+ Y+ R + N++ R
Sbjct: 253 CGWGLPMLDRKRLKDTKRQVQLRAAGKEIAPNQRPQQQHRPWKAVYMDRFKVGTNWKYGR 312
Query: 127 YT------HFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTF 180
T H N CL D LA G D ++++D+ T +RT
Sbjct: 313 CTTTIFRGHTNGVM--------------CLQFDDNILATGSYDATIKIWDIETGKEIRTL 358
Query: 181 RPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHV 216
R S + + D++LI +LD I V
Sbjct: 359 RGHES--------TIRCLQFDDTKLISGSLDRTIKV 386
>sp|D4AM37|SCONB_ARTBC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS
112371) GN=sconB PE=3 SV=1
Length = 663
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 77/216 (35%), Gaps = 70/216 (32%)
Query: 45 FVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRI------- 97
FV AL +++ + + A+L + QV +WRA++ D++WHR+ +
Sbjct: 197 FVTALPPEISFK----ILSYLDTASLCSAAQVSHSWRALADDDVVWHRMCEQHIDRKCEK 252
Query: 98 --WG-----------------------------RTNLLHATWRDEYIYRHRTAQNFRTRR 126
WG R H W+ Y+ R + N++ R
Sbjct: 253 CGWGLPMLDRKRLKDTKRQVQLRAAGKEIAPNQRPQQQHRPWKAVYMDRFKVGTNWKYGR 312
Query: 127 YT------HFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTF 180
T H N CL D LA G D ++++D+ T +RT
Sbjct: 313 CTTTIFRGHTNGVM--------------CLQFDDNILATGSYDATIKIWDIETGKEIRTL 358
Query: 181 RPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHV 216
R S + + D++LI +LD I V
Sbjct: 359 RGHES--------TIRCLQFDDTKLISGSLDRTIKV 386
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 22/166 (13%)
Query: 27 PSSSRQRRRAVNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRS 86
P+ + + + + F+ L ++A+ V L Q C WR ++
Sbjct: 262 PTQVKHMMQVIEPQFQRDFISLLPKELAL----YVLSFLEPKDLLQAAQTCRYWRILAED 317
Query: 87 DLLWHR------------LTRRIWGRTNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYF 134
+LLW + RR + +H+ W+ YI +HR N+R
Sbjct: 318 NLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELK------ 371
Query: 135 DPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTF 180
P + D CL + G D ++++ T +RT
Sbjct: 372 SPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL 417
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 22/166 (13%)
Query: 27 PSSSRQRRRAVNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRS 86
P+ + + + + F+ L ++A+ V L Q C WR ++
Sbjct: 184 PTQVKHMMQVIEPQFQRDFISLLPKELAL----YVLSFLEPKDLLQAAQTCRYWRILAED 239
Query: 87 DLLWHR------------LTRRIWGRTNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYF 134
+LLW + RR + +H+ W+ YI +HR N+R
Sbjct: 240 NLLWREKCKEEGIDEPLHIKRRKIIKPGFIHSPWKSAYIRQHRIDTNWRRGELK------ 293
Query: 135 DPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTF 180
P + D CL + G D ++++ T +RT
Sbjct: 294 SPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL 339
>sp|Q8BIA4|FBXW8_MOUSE F-box/WD repeat-containing protein 8 OS=Mus musculus GN=Fbxw8 PE=1
SV=2
Length = 598
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 88/221 (39%), Gaps = 34/221 (15%)
Query: 20 RGGDFEGPSSSRQRRRAVNEVWPEPFVEALA-------------AQVAIEASRSVGRLAA 66
RGGD + SS + + PEP V+ L ++ E + ++ +
Sbjct: 73 RGGDRKDTSSRSRSPPDRDATEPEPLVDQLIRDLNELDDVPFFDVRLPYELAINIFQYLN 132
Query: 67 AAALANVFQVCSTWRAVSRSDLLWHRLTRRIWGRTNLLHATWRDEYIYR----------H 116
L QV TW+ ++ ++LW+RL R+ +L H+ + D ++ H
Sbjct: 133 RRELGLCAQVSKTWKVIAEDEVLWYRLCRQ---EGHLPHSRFSDYTCWKLILQECLAKEH 189
Query: 117 RTAQNFRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLH 176
N++ R+ L PD + C + + +A G+ G VR++D T +
Sbjct: 190 TLRANWKNRKGAVSELEH------VPDAVLCDVRSHDGVVIA-GYTSGDVRVWDTRTWDY 242
Query: 177 VRTFRPQHSDRLGQ-FSRAVSGIIITDSQLIFATLDGDIHV 216
V F S+ VS + I S + A DG +++
Sbjct: 243 VAPFLESESEEEDPGMQPYVSFVRINSSLAVAAYEDGILNI 283
>sp|B1ANS9|WDR64_HUMAN WD repeat-containing protein 64 OS=Homo sapiens GN=WDR64 PE=2 SV=1
Length = 1081
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 384 DRNVNVMGCMNQGYALM--CVEGVIRVWEVEGGEYMYSFRERIG--EEVIAFVGDDRHVA 439
+R +NVM + ++ C E +IRVWE+E G +Y E G EV + D+
Sbjct: 455 EREINVMLYNKYFHQVLTICSESIIRVWELETGLQVYQILEPHGFNTEVTSAAVDESGFL 514
Query: 440 ASCGT---NIHLWDFGA 453
+ G + +WDFG+
Sbjct: 515 FATGAYNGTVRIWDFGS 531
>sp|P38149|DUG2_YEAST Probable di- and tripeptidase DUG2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DUG2 PE=1 SV=1
Length = 878
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 139 VDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQH 184
+DN D + + + LY CG DG ++++DL T+ + T + +H
Sbjct: 284 IDNEDSVISQTIEFPFLY--CGLTDGIIKIWDLNTQQIISTLKTKH 327
>sp|O87844|EFG2_STRCO Elongation factor G 2 OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=fusB PE=3 SV=1
Length = 686
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 287 WRMLTEFTEFVGR---VRVTSH---ESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVT 340
W T TE +GR VR H E AVA V+ G L G L
Sbjct: 336 WDAGTRRTERIGRILRVRADRHDPLERAVAGDIVAVVGLKTARAGSTLCAPGAPLLLEPP 395
Query: 341 SVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNV--NVMGCMNQGYA 398
V ++ VE R +R A + R+ EE +LR D V+ M + +
Sbjct: 396 GV-AEPVVHVAVEARRSTETDRLAAALARLT--EEDPSLALRTDPETAQTVLSGMGELHL 452
Query: 399 LMCVEGVIRVW--EVEGGEYMYSFRERIGEEVIAFVGDDRHVAASCG 443
+ VE V R + EV G ++RE +GE V FV RHV G
Sbjct: 453 EVAVERVRREYGLEVTVGRPGVAYRETVGEGVTGFV--HRHVKQDGG 497
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 35.4 bits (80), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 378 RFSLRADRNVNVMGCMNQGYALMCV---EGVIRVWEVEGGEYMYSFRERIGE-EVIAFVG 433
+FSL R + Y+LM + VI++W+ E GEY S + + IAF
Sbjct: 101 KFSLSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDS 160
Query: 434 DDRHVAASCGTN--IHLWDF 451
+ + ASC + I LWDF
Sbjct: 161 QGK-LLASCSADLSIKLWDF 179
>sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 OS=Mus musculus GN=Wdr3 PE=2 SV=1
Length = 942
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 141 NPDGLTCRCLTLSDLYLACGFADGAVRLFDLTT 173
N +TC C + L+LA G+ DGA+R+F L +
Sbjct: 64 NKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLS 96
>sp|P0CS40|JIP5_CRYNJ WD repeat-containing protein JIP5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=JIP5 PE=3 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 157 LACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHV 216
+A G DG ++L+D +RT+ QH D + F+ D + + AT GD H+
Sbjct: 136 VATGDDDGVIKLWDPRQADSIRTYS-QHFDYISDFT------YFDDKRQLVAT-SGDGHL 187
Query: 217 AVIDDVANETRTAHFGSVMDDGVL--IDFTGCSRYWVGLYAGLAGRAFHIWDRQ 268
+VID +N++ +D +L + G + VG G+ +W+RQ
Sbjct: 188 SVIDIRSNKSTPLTVSEDQEDELLSIVPIKGGQKAIVGSGLGI----LSVWNRQ 237
>sp|P0CS41|JIP5_CRYNB WD repeat-containing protein JIP5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=JIP5 PE=3 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 157 LACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHV 216
+A G DG ++L+D +RT+ QH D + F+ D + + AT GD H+
Sbjct: 136 VATGDDDGVIKLWDPRQADSIRTYS-QHFDYISDFT------YFDDKRQLVAT-SGDGHL 187
Query: 217 AVIDDVANETRTAHFGSVMDDGVL--IDFTGCSRYWVGLYAGLAGRAFHIWDRQ 268
+VID +N++ +D +L + G + VG G+ +W+RQ
Sbjct: 188 SVIDIRSNKSTPLTVSEDQEDELLSIVPIKGGQKAIVGSGLGI----LSVWNRQ 237
>sp|O14301|YE85_SCHPO Uncharacterized WD repeat-containing protein C9G1.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC9G1.05 PE=3 SV=1
Length = 595
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 140 DNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDR-LGQFSRAVSGI 198
D+ +TC + YLACG A G V L+D +R + + H+ R LG A S
Sbjct: 477 DSTAPITCLAYSPDGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSWNAKS-- 534
Query: 199 IITDSQLIFATLDGDIHVAVID 220
+ L A+LD +IH+ ++
Sbjct: 535 ----THLATASLDTNIHIYSVE 552
>sp|Q9D565|WDR64_MOUSE WD repeat-containing protein 64 OS=Mus musculus GN=Wdr64 PE=2 SV=2
Length = 1086
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 400 MCVEGVIRVWEVEGGEYMYSFRERIG---EEVIAFVGDDRHVAASCGTN--IHLWDFGA 453
+C E VI+VWE+E G +Y + G E A + + ++ A+ N + +WDFG+
Sbjct: 473 VCSESVIKVWELETGLQIYQILDPHGLSIELTCAAIDESGYLFATGAYNGTVKIWDFGS 531
>sp|B7FNU7|LIS1_PHATC Lissencephaly-1 homolog OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=PHATRDRAFT_17300 PE=3 SV=1
Length = 439
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 403 EGVIRVWEVEGGEYMYSFRERIGE-EVIAFVGDDRHVAASCGTN--IHLWDF 451
+G ++VW+ E GEY+ + + +AF H+ ASC T+ I LWDF
Sbjct: 150 DGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPTGSHL-ASCSTDLSIKLWDF 200
>sp|Q7ZVL2|WDR24_DANRE WD repeat-containing protein 24 OS=Danio rerio GN=wdr24 PE=2 SV=1
Length = 779
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 84 SRSDLLWHRLTRRIWGR--TNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDN 141
S +D++WH++ + TN TW R++ Q F + T + F P++V+
Sbjct: 70 SCADVMWHQMEENLLATAATNGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVN- 128
Query: 142 PDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQ-HSDRLGQFS 192
L G DG ++ FDL + V TF Q S R QFS
Sbjct: 129 --------------MLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFS 166
>sp|O60336|MABP1_HUMAN Mitogen-activated protein kinase-binding protein 1 OS=Homo sapiens
GN=MAPKBP1 PE=2 SV=4
Length = 1514
Score = 34.3 bits (77), Expect = 1.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 122 FRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFR 181
F RR + + + ++D+ C+++S Y+ CG ADG VRLF+ + LH +
Sbjct: 260 FSDRRL--LDKWVELRNIDSFTTTVAHCISVSQDYIFCGCADGTVRLFN-PSNLHFLSTL 316
Query: 182 PQ 183
P+
Sbjct: 317 PR 318
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 146 TCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFR 181
T RC+ +++ L G D +R++D+ T LHVRT +
Sbjct: 342 TVRCMAMANTTLVTGSRDCTLRVWDIETGLHVRTLQ 377
>sp|A2QCU8|SCONB_ASPNC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=sconB PE=3 SV=1
Length = 670
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 149 CLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFA 208
CL D LA G D ++++D T +RT R S + + D++LI
Sbjct: 346 CLQFEDNILATGSYDATIKIWDTDTGQEIRTLRGHES--------GIRCLQFDDTKLISG 397
Query: 209 TLDGDIHV 216
++DG + V
Sbjct: 398 SMDGSVKV 405
>sp|Q7ZX22|WDR24_XENLA WD repeat-containing protein 24 OS=Xenopus laevis GN=wdr24 PE=2
SV=1
Length = 780
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 84 SRSDLLWHRLTRRIWGR--TNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDN 141
S +D++WH++ + TN + TW R++ Q F + T + F P++V
Sbjct: 71 SCADVVWHQMDDNLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEV-- 128
Query: 142 PDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQ-HSDRLGQFSRAVSGIII 200
L G DG ++ FDL + V TF Q S R QFS I
Sbjct: 129 -------------YMLLSGSQDGYMKCFDLRKKDSVSTFSGQSESVRDVQFS-------I 168
Query: 201 TDSQLIFATLD-GDIHVAVI--DDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL 257
D AT + G++ + I D TAH G V D+ R W L G
Sbjct: 169 RDYFTFAATFENGNVQLWDIRRPDRCERMFTAHNGPVF----CCDWHPEDRGW--LATGG 222
Query: 258 AGRAFHIWD---RQAEEVF 273
+ +WD +A+E++
Sbjct: 223 RDKMVKVWDMNTNRAKEIY 241
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 152 LSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLD 211
+ D YL G D +++++DL T V T HS LG V +++ ++Q+I A D
Sbjct: 1083 VKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHS--LG-----VKCLMVFNNQIISAAFD 1135
Query: 212 GDIHV 216
G I V
Sbjct: 1136 GSIKV 1140
>sp|Q9WVB3|TLE6_MOUSE Transducin-like enhancer protein 6 OS=Mus musculus GN=Tle6 PE=1
SV=1
Length = 581
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 143 DGLTCRCL--TLSDLYLACGFADGAVRLFDLTTRLHVRTFR-PQHSDR 187
+GL+C+ L T ++ LA GF DG VR++DL T+ VR + P +S R
Sbjct: 387 EGLSCQALANTKENMALA-GFTDGTVRIWDLRTQEIVRNLKGPTNSAR 433
>sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium
discoideum GN=mkkA PE=1 SV=2
Length = 942
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 402 VEGVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHVAASCGTNIHLWDFGA 453
V+ VW+ + SF + + + +V D + V SC I LWD G
Sbjct: 808 VDKTSNVWDTRSSSKVRSFTQHTEDVLCCYVFDQKVVTGSCDGTIKLWDIGT 859
>sp|Q01277|SCONB_NEUCR Probable E3 ubiquitin ligase complex SCF subunit scon-2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=scon-2 PE=1 SV=1
Length = 650
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 107 TWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAV 166
+W+ Y R + + N++ RY L + +G+TC L L D LA G D +
Sbjct: 265 SWKAVYRDRWQVSYNWKNSRYKLSVLK------GHENGVTC--LQLDDNILATGSYDTTI 316
Query: 167 RLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHV 216
+++++ T +RT L + + + DS+LI +LD I V
Sbjct: 317 KIWNIETEECIRT--------LVGHTAGIRALQFDDSKLISGSLDHTIKV 358
>sp|B6GZA1|SCONB_PENCW Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075
/ Wisconsin 54-1255) GN=sconB PE=3 SV=1
Length = 673
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 51 AQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRL 93
A + E S + R A+L QV WRA++ D++WHR+
Sbjct: 169 AALPPELSFKILRYLDTASLCRAAQVSPRWRALADDDVVWHRM 211
>sp|P15484|CS32_ECOLX Outer membrane usher protein CS3-2 OS=Escherichia coli PE=3 SV=2
Length = 937
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 90 WHRLTRRIWGRTNLLHATWRDEYIYRHRTAQNFRTRRY 127
W T+ IW + N W + Y+Y R N ++R Y
Sbjct: 117 WRIRTQAIWNKNNNTKGEWSNNYLYAERGLGNIKSRLY 154
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 76/228 (33%), Gaps = 32/228 (14%)
Query: 23 DFEGPSSSRQRRRAVNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRA 82
D PS R + + + F+ L ++A+ V L Q C +WR
Sbjct: 869 DHCDPSQVRHMMKVIEPQFQRDFISLLPRELAL----FVLSYLEPKDLLRAAQTCRSWRF 924
Query: 83 VSRSDLLWHRLTRRIW---------------GRTNLLHATWRDEYIYRHRTAQNFRTRRY 127
+ +LLW R+ G + + W+ Y+ +H N+R+R
Sbjct: 925 LCDDNLLWKEKCRKAQILAEPRSDRPKRGRDGNMPPIASPWKAAYMRQHIIEMNWRSRPV 984
Query: 128 THFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDR 187
P + D CL S + G D ++++ +RT
Sbjct: 985 RK------PKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTG-- 1036
Query: 188 LGQFSRAVSGIII----TDSQLIFATLDGDIHVAVIDDVANETRTAHF 231
G +S +SG II TD L +D V + + R H
Sbjct: 1037 -GVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL 1083
>sp|Q8N3Y1|FBXW8_HUMAN F-box/WD repeat-containing protein 8 OS=Homo sapiens GN=FBXW8 PE=1
SV=2
Length = 598
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 32 QRRRAVNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWH 91
Q R +NE+ PF + Q+ E + ++ + L QV TW+ ++ ++LW+
Sbjct: 101 QLIRDLNEMNDVPFFDI---QLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWY 157
Query: 92 RLTRRIWGRTNLLHATWRDEYIYR----------HRTAQNFRTRRYTHFNLYFDPSDVDN 141
RL ++ +L ++ D ++ H N++ R+ L
Sbjct: 158 RLCQQ---EGHLPDSSISDYSCWKLIFQECRAKEHMLRTNWKNRKGAVSELEH------V 208
Query: 142 PDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTF--RPQHSDRLGQFSRAVSGII 199
PD + C + + +A G+ G VR++D T +V F D G VS +
Sbjct: 209 PDTVLCDVHSHDGVVIA-GYTSGDVRVWDTRTWDYVAPFLESEDEEDEPG-MQPNVSFVR 266
Query: 200 ITDSQLIFATLDGDIHV 216
I S + A DG +++
Sbjct: 267 INSSLAVAAYEDGFLNI 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,942,697
Number of Sequences: 539616
Number of extensions: 7225525
Number of successful extensions: 34472
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 34225
Number of HSP's gapped (non-prelim): 254
length of query: 453
length of database: 191,569,459
effective HSP length: 121
effective length of query: 332
effective length of database: 126,275,923
effective search space: 41923606436
effective search space used: 41923606436
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)