Query 046773
Match_columns 453
No_of_seqs 313 out of 1155
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 07:03:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9E-51 3.1E-55 418.2 45.5 363 36-452 9-390 (445)
2 1p22_A F-BOX/WD-repeat protein 100.0 2.7E-51 9.1E-56 421.9 39.4 366 37-452 2-413 (435)
3 3v7d_B Cell division control p 100.0 1.7E-49 5.8E-54 409.3 47.3 382 37-452 6-420 (464)
4 1vyh_C Platelet-activating fac 100.0 1E-42 3.4E-47 357.1 38.9 273 138-451 106-409 (410)
5 3ow8_A WD repeat-containing pr 100.0 3E-41 1E-45 335.3 39.6 275 137-453 29-321 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 9.3E-41 3.2E-45 328.0 38.6 274 138-452 11-301 (304)
7 1got_B GT-beta; complex (GTP-b 100.0 9.7E-40 3.3E-44 325.7 40.7 272 137-450 52-340 (340)
8 3frx_A Guanine nucleotide-bind 100.0 4.9E-39 1.7E-43 318.2 39.8 272 137-452 14-316 (319)
9 2pbi_B Guanine nucleotide-bind 100.0 4.8E-39 1.6E-43 323.4 40.1 272 138-450 62-354 (354)
10 3iz6_a 40S ribosomal protein R 100.0 2.3E-39 7.7E-44 328.2 30.8 281 137-452 63-374 (380)
11 4gqb_B Methylosome protein 50; 100.0 3.2E-38 1.1E-42 317.8 34.7 275 147-452 33-330 (344)
12 2xzm_R RACK1; ribosome, transl 100.0 7.1E-38 2.4E-42 312.2 36.6 273 138-452 19-339 (343)
13 2hes_X YDR267CP; beta-propelle 100.0 8.8E-38 3E-42 310.6 36.5 276 138-452 12-327 (330)
14 4ery_A WD repeat-containing pr 100.0 8.5E-37 2.9E-41 298.5 42.4 275 137-452 20-311 (312)
15 1nr0_A Actin interacting prote 100.0 1.7E-37 5.9E-42 334.2 39.0 287 137-452 144-566 (611)
16 4g56_B MGC81050 protein; prote 100.0 4.6E-38 1.6E-42 316.9 31.9 274 137-452 39-342 (357)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.3E-37 3.2E-41 305.0 37.2 279 137-452 12-334 (345)
18 1erj_A Transcriptional repress 100.0 1.5E-36 5.2E-41 308.8 38.2 279 138-452 62-388 (393)
19 4aow_A Guanine nucleotide-bind 100.0 9E-36 3.1E-40 291.6 41.3 275 137-452 35-336 (340)
20 3dm0_A Maltose-binding peripla 100.0 2.8E-36 9.7E-41 328.6 40.0 276 138-452 380-692 (694)
21 1nr0_A Actin interacting prote 100.0 5.2E-36 1.8E-40 322.7 39.6 272 138-452 57-354 (611)
22 2ymu_A WD-40 repeat protein; u 100.0 2.6E-35 8.9E-40 310.7 41.0 267 138-450 301-577 (577)
23 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-34 1E-38 294.9 40.3 270 137-453 156-442 (445)
24 4e54_B DNA damage-binding prot 100.0 7E-36 2.4E-40 307.6 27.3 275 138-452 117-429 (435)
25 4h5i_A Guanine nucleotide-exch 100.0 3.1E-34 1.1E-38 290.0 37.3 278 147-452 17-342 (365)
26 1sq9_A Antiviral protein SKI8; 100.0 2.6E-34 8.9E-39 288.1 36.5 281 137-452 13-394 (397)
27 3zwl_B Eukaryotic translation 100.0 9.5E-34 3.3E-38 278.8 39.3 279 138-452 30-345 (369)
28 2ynn_A Coatomer subunit beta'; 100.0 1.9E-34 6.6E-39 282.9 33.7 240 175-452 4-258 (304)
29 2ymu_A WD-40 repeat protein; u 100.0 1.5E-33 5E-38 297.3 41.8 269 138-452 260-538 (577)
30 1vyh_C Platelet-activating fac 100.0 3.5E-34 1.2E-38 293.5 33.2 248 167-452 92-368 (410)
31 4ggc_A P55CDC, cell division c 100.0 4.4E-34 1.5E-38 277.0 32.0 273 143-452 24-314 (318)
32 3ei3_B DNA damage-binding prot 100.0 8E-34 2.7E-38 284.9 34.3 274 137-452 70-381 (383)
33 4gga_A P55CDC, cell division c 100.0 1.3E-33 4.4E-38 289.0 34.6 271 143-452 104-394 (420)
34 3ow8_A WD repeat-containing pr 100.0 2.7E-33 9.2E-38 278.0 34.2 241 175-452 23-278 (321)
35 3k26_A Polycomb protein EED; W 100.0 5.5E-34 1.9E-38 280.7 28.2 283 137-452 15-365 (366)
36 4gqb_B Methylosome protein 50; 100.0 1.7E-33 5.7E-38 283.3 30.7 235 147-416 85-334 (344)
37 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-34 5.2E-39 307.8 23.1 260 156-452 175-516 (524)
38 3odt_A Protein DOA1; ubiquitin 100.0 2.2E-31 7.5E-36 256.9 41.3 267 137-452 15-295 (313)
39 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-32 9.4E-37 270.1 35.4 277 138-452 6-360 (372)
40 2pm7_B Protein transport prote 100.0 9.6E-33 3.3E-37 269.9 31.4 238 137-412 6-284 (297)
41 3v7d_B Cell division control p 100.0 8.2E-32 2.8E-36 277.1 39.4 269 137-451 159-463 (464)
42 1r5m_A SIR4-interacting protei 100.0 1.8E-32 6.1E-37 274.9 33.3 269 147-452 111-424 (425)
43 2pm9_A Protein WEB1, protein t 100.0 1.6E-33 5.6E-38 283.6 24.6 279 138-452 65-413 (416)
44 1got_B GT-beta; complex (GTP-b 100.0 5.8E-32 2E-36 269.4 35.5 246 174-452 45-300 (340)
45 1gxr_A ESG1, transducin-like e 100.0 1.2E-31 4E-36 261.1 36.8 269 138-451 49-335 (337)
46 3gre_A Serine/threonine-protei 100.0 1.8E-32 6.2E-37 279.9 32.4 273 137-450 60-437 (437)
47 3i2n_A WD repeat-containing pr 100.0 8.3E-33 2.8E-37 271.8 28.5 274 137-452 15-352 (357)
48 3vl1_A 26S proteasome regulato 100.0 7.7E-33 2.6E-37 279.9 28.5 269 148-452 60-364 (420)
49 4aez_A CDC20, WD repeat-contai 100.0 9E-32 3.1E-36 273.4 35.7 276 136-452 87-379 (401)
50 3iz6_a 40S ribosomal protein R 100.0 2.8E-33 9.7E-38 283.4 24.4 260 163-452 45-328 (380)
51 3frx_A Guanine nucleotide-bind 100.0 2.8E-31 9.7E-36 262.4 37.0 239 175-452 8-266 (319)
52 1r5m_A SIR4-interacting protei 100.0 6.6E-32 2.3E-36 270.8 32.9 276 147-452 48-360 (425)
53 3bg1_A Protein SEC13 homolog; 100.0 1E-32 3.6E-37 272.3 26.6 252 137-426 10-309 (316)
54 3mmy_A MRNA export factor; mRN 100.0 1.3E-31 4.5E-36 263.4 32.6 271 137-450 36-343 (368)
55 3vl1_A 26S proteasome regulato 100.0 1.7E-31 5.7E-36 270.1 33.6 280 148-452 101-418 (420)
56 2hes_X YDR267CP; beta-propelle 100.0 1.6E-31 5.6E-36 265.3 32.7 249 172-451 2-278 (330)
57 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-31 5.4E-36 307.5 37.5 276 137-452 612-1033(1249)
58 1yfq_A Cell cycle arrest prote 100.0 2.2E-31 7.7E-36 261.0 33.1 266 137-445 8-315 (342)
59 3dwl_C Actin-related protein 2 100.0 3.7E-33 1.3E-37 278.6 20.0 232 147-412 14-280 (377)
60 3mkq_A Coatomer beta'-subunit; 100.0 4.2E-31 1.4E-35 289.8 37.6 275 138-452 11-301 (814)
61 4a11_B DNA excision repair pro 100.0 3.3E-31 1.1E-35 264.7 33.2 284 137-452 40-364 (408)
62 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.5E-31 1.2E-35 264.6 33.0 247 137-421 58-343 (345)
63 2pbi_B Guanine nucleotide-bind 100.0 8E-31 2.7E-35 263.4 35.5 247 175-452 55-314 (354)
64 2pm9_A Protein WEB1, protein t 100.0 1.7E-32 5.8E-37 276.2 23.2 280 147-452 15-336 (416)
65 4g56_B MGC81050 protein; prote 100.0 1.3E-31 4.3E-36 269.8 27.7 238 138-414 92-344 (357)
66 2pm7_B Protein transport prote 100.0 5.2E-31 1.8E-35 257.6 30.9 240 178-452 3-284 (297)
67 2xzm_R RACK1; ribosome, transl 100.0 2.3E-30 7.8E-35 257.8 35.2 238 175-452 12-284 (343)
68 1erj_A Transcriptional repress 100.0 1.5E-30 5.3E-35 264.4 34.3 239 145-413 124-389 (393)
69 3dw8_B Serine/threonine-protei 100.0 4.3E-31 1.5E-35 268.9 29.5 279 147-451 31-444 (447)
70 1pgu_A Actin interacting prote 100.0 3.8E-30 1.3E-34 271.7 35.4 292 138-452 201-613 (615)
71 4ery_A WD repeat-containing pr 100.0 7.7E-30 2.6E-34 249.1 34.7 243 174-452 13-267 (312)
72 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-30 4.6E-35 252.6 29.0 287 137-452 8-336 (351)
73 4gga_A P55CDC, cell division c 100.0 7.8E-30 2.7E-34 260.9 34.2 251 138-425 145-407 (420)
74 1pgu_A Actin interacting prote 100.0 1.8E-29 6.2E-34 266.5 36.6 272 136-452 14-327 (615)
75 2oaj_A Protein SNI1; WD40 repe 100.0 4.5E-30 1.5E-34 289.4 32.6 205 138-378 15-248 (902)
76 3bg1_A Protein SEC13 homolog; 100.0 1.4E-30 4.9E-35 257.0 24.2 232 194-452 15-292 (316)
77 2oaj_A Protein SNI1; WD40 repe 100.0 8.3E-30 2.8E-34 287.3 32.9 293 137-451 148-659 (902)
78 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-29 4.5E-34 260.1 30.3 237 138-420 171-421 (435)
79 4ggc_A P55CDC, cell division c 100.0 1.1E-28 3.6E-33 239.0 34.5 240 138-414 65-316 (318)
80 4aow_A Guanine nucleotide-bind 100.0 4.2E-28 1.4E-32 237.0 35.8 256 159-452 9-285 (340)
81 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-30 5.8E-35 298.9 21.9 265 147-451 964-1247(1249)
82 1gxr_A ESG1, transducin-like e 100.0 1.6E-28 5.5E-33 238.8 32.2 268 147-452 12-295 (337)
83 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-29 4.2E-34 257.1 24.9 268 148-452 38-341 (402)
84 4aez_A CDC20, WD repeat-contai 100.0 4.8E-28 1.7E-32 245.8 36.5 238 147-421 137-388 (401)
85 2w18_A PALB2, fancn, partner a 100.0 7.2E-29 2.5E-33 249.3 29.7 245 156-452 56-356 (356)
86 3dm0_A Maltose-binding peripla 100.0 1.9E-28 6.5E-33 266.9 34.6 237 177-452 375-631 (694)
87 3k26_A Polycomb protein EED; W 100.0 2.3E-29 8E-34 247.6 24.4 244 147-413 72-366 (366)
88 3jrp_A Fusion protein of prote 100.0 1.9E-28 6.5E-33 242.2 30.5 238 138-414 9-288 (379)
89 4gq1_A NUP37; propeller, trans 100.0 6E-29 2.1E-33 253.2 23.1 221 202-451 101-387 (393)
90 2j04_B YDR362CP, TAU91; beta p 100.0 2.4E-29 8.2E-34 267.7 20.4 232 201-452 172-427 (524)
91 4e54_B DNA damage-binding prot 100.0 7.2E-29 2.5E-33 255.2 23.3 254 137-417 161-434 (435)
92 1sq9_A Antiviral protein SKI8; 100.0 1.9E-27 6.6E-32 238.1 32.8 242 138-415 60-397 (397)
93 3odt_A Protein DOA1; ubiquitin 100.0 8E-27 2.7E-31 224.8 35.3 242 170-452 3-254 (313)
94 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-27 1E-31 259.2 36.2 274 138-452 53-385 (814)
95 3jrp_A Fusion protein of prote 100.0 8.7E-28 3E-32 237.5 28.8 244 174-452 1-286 (379)
96 3i2n_A WD repeat-containing pr 100.0 7.9E-28 2.7E-32 236.2 27.7 242 138-416 63-356 (357)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.2E-27 1.4E-31 242.8 33.7 276 147-451 7-389 (450)
98 3gre_A Serine/threonine-protei 100.0 5.5E-28 1.9E-32 246.6 26.7 259 155-452 40-358 (437)
99 3vu4_A KMHSV2; beta-propeller 100.0 2.4E-27 8.4E-32 238.0 31.0 266 137-452 16-335 (355)
100 4a11_B DNA excision repair pro 100.0 5.1E-27 1.7E-31 234.3 30.1 285 138-452 97-404 (408)
101 1l0q_A Surface layer protein; 100.0 4.4E-26 1.5E-30 228.4 35.1 257 155-452 3-274 (391)
102 3lrv_A PRE-mRNA-splicing facto 100.0 8.6E-28 2.9E-32 238.9 22.2 231 152-452 46-291 (343)
103 3ei3_B DNA damage-binding prot 100.0 6E-27 2.1E-31 234.8 28.0 247 168-452 57-338 (383)
104 4h5i_A Guanine nucleotide-exch 100.0 1E-26 3.6E-31 234.7 29.8 246 137-414 70-344 (365)
105 2j04_A TAU60, YPL007P, hypothe 100.0 7E-28 2.4E-32 256.0 21.9 249 147-452 18-296 (588)
106 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-26 3.7E-31 233.3 28.6 240 168-452 3-270 (355)
107 3dw8_B Serine/threonine-protei 100.0 3.8E-27 1.3E-31 239.7 25.4 246 193-452 29-372 (447)
108 3dwl_C Actin-related protein 2 100.0 7.3E-28 2.5E-32 240.2 19.2 231 194-451 13-279 (377)
109 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-26 7.1E-31 227.8 29.2 232 194-452 10-273 (372)
110 4gq1_A NUP37; propeller, trans 100.0 6.3E-27 2.2E-31 238.2 23.7 238 154-412 101-388 (393)
111 3bws_A Protein LP49; two-domai 100.0 1.4E-25 4.7E-30 227.9 33.1 265 147-452 125-431 (433)
112 3zwl_B Eukaryotic translation 100.0 3.6E-25 1.2E-29 217.4 34.5 238 176-452 24-303 (369)
113 3mmy_A MRNA export factor; mRN 99.9 1.8E-25 6.1E-30 219.6 31.3 244 168-452 23-303 (368)
114 2aq5_A Coronin-1A; WD40 repeat 99.9 2.8E-26 9.4E-31 232.4 26.2 238 138-417 79-346 (402)
115 3jro_A Fusion protein of prote 99.9 2E-26 6.8E-31 254.4 24.8 239 137-414 6-286 (753)
116 2w18_A PALB2, fancn, partner a 99.9 1.1E-25 3.7E-30 226.2 27.6 208 147-411 114-355 (356)
117 2xyi_A Probable histone-bindin 99.9 1.4E-25 4.8E-30 230.5 28.4 243 138-452 126-409 (430)
118 1yfq_A Cell cycle arrest prote 99.9 2.3E-25 8E-30 218.0 26.3 226 194-452 13-281 (342)
119 1l0q_A Surface layer protein; 99.9 7.9E-24 2.7E-28 212.0 35.4 265 147-452 34-341 (391)
120 3jro_A Fusion protein of prote 99.9 2.1E-25 7.2E-30 246.2 24.5 241 177-452 2-284 (753)
121 3f3f_A Nucleoporin SEH1; struc 99.9 1.8E-24 6.1E-29 209.4 27.3 252 138-423 55-350 (351)
122 2j04_A TAU60, YPL007P, hypothe 99.9 3.8E-25 1.3E-29 235.0 21.1 260 137-441 49-348 (588)
123 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.3E-23 7.7E-28 214.2 28.8 258 155-452 76-386 (415)
124 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.6E-22 9E-27 206.9 33.3 239 138-416 100-396 (450)
125 3lrv_A PRE-mRNA-splicing facto 99.9 2.8E-23 9.5E-28 206.3 22.4 228 147-411 79-331 (343)
126 1nir_A Nitrite reductase; hemo 99.9 4.3E-22 1.5E-26 212.5 31.3 270 152-452 145-457 (543)
127 1nir_A Nitrite reductase; hemo 99.9 1.9E-21 6.6E-26 207.4 34.3 272 147-452 181-513 (543)
128 3bws_A Protein LP49; two-domai 99.9 5.6E-22 1.9E-26 201.2 26.8 258 159-452 94-389 (433)
129 2xyi_A Probable histone-bindin 99.9 1.2E-20 4.2E-25 193.6 24.6 197 138-372 179-410 (430)
130 3u4y_A Uncharacterized protein 99.9 3.2E-19 1.1E-23 174.4 32.9 259 155-452 11-303 (331)
131 2ecf_A Dipeptidyl peptidase IV 99.9 9E-20 3.1E-24 198.7 30.9 286 147-452 39-412 (741)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-19 3.6E-24 186.8 29.0 242 154-435 143-409 (415)
133 1pby_B Quinohemoprotein amine 99.9 3.7E-19 1.3E-23 172.9 28.9 270 155-452 2-309 (337)
134 1xfd_A DIP, dipeptidyl aminope 99.8 4.6E-20 1.6E-24 200.1 20.9 283 147-452 19-392 (723)
135 2z3z_A Dipeptidyl aminopeptida 99.8 1.2E-18 4.2E-23 188.9 28.4 272 147-452 84-434 (706)
136 1k32_A Tricorn protease; prote 99.8 1.5E-18 5.2E-23 197.7 30.4 268 138-451 201-500 (1045)
137 3o4h_A Acylamino-acid-releasin 99.8 1.5E-18 5.2E-23 184.5 26.4 259 147-451 24-313 (582)
138 3vgz_A Uncharacterized protein 99.8 5.4E-17 1.9E-21 159.1 35.1 257 147-441 43-331 (353)
139 1ri6_A Putative isomerase YBHE 99.8 3.2E-17 1.1E-21 159.6 31.3 263 156-451 7-306 (343)
140 2ecf_A Dipeptidyl peptidase IV 99.8 2.4E-18 8.2E-23 187.4 23.8 267 147-451 111-457 (741)
141 2ojh_A Uncharacterized protein 99.8 1.2E-17 4E-22 158.0 25.1 242 158-441 16-289 (297)
142 2z3z_A Dipeptidyl aminopeptida 99.8 4.7E-18 1.6E-22 184.3 24.9 287 150-451 31-389 (706)
143 1k32_A Tricorn protease; prote 99.8 1.1E-16 3.9E-21 182.2 30.3 280 148-452 110-460 (1045)
144 1jmx_B Amine dehydrogenase; ox 99.8 1.5E-16 5.2E-21 155.4 26.7 236 154-423 11-335 (349)
145 3hfq_A Uncharacterized protein 99.8 2.1E-15 7E-20 148.8 32.7 259 162-452 14-316 (347)
146 1z68_A Fibroblast activation p 99.7 1.4E-17 4.8E-22 181.1 17.0 277 149-452 20-390 (719)
147 3vgz_A Uncharacterized protein 99.7 2E-15 6.8E-20 147.9 30.2 239 195-452 43-302 (353)
148 3o4h_A Acylamino-acid-releasin 99.7 1E-16 3.6E-21 170.3 22.4 225 195-451 24-274 (582)
149 1ri6_A Putative isomerase YBHE 99.7 7.9E-15 2.7E-19 142.5 32.0 257 147-436 40-335 (343)
150 4a5s_A Dipeptidyl peptidase 4 99.7 4.8E-16 1.6E-20 170.7 25.5 270 148-441 20-381 (740)
151 2ojh_A Uncharacterized protein 99.7 1.1E-15 3.6E-20 144.5 24.3 227 147-403 44-291 (297)
152 3u4y_A Uncharacterized protein 99.7 2.2E-15 7.6E-20 146.9 27.3 221 204-452 12-251 (331)
153 1xfd_A DIP, dipeptidyl aminope 99.7 2.1E-16 7.3E-21 171.3 21.8 273 147-441 63-427 (723)
154 1pby_B Quinohemoprotein amine 99.7 6.3E-15 2.2E-19 142.8 26.1 240 147-423 36-320 (337)
155 1jmx_B Amine dehydrogenase; ox 99.7 2.6E-15 9E-20 146.5 22.8 220 201-452 10-324 (349)
156 3hfq_A Uncharacterized protein 99.7 2.6E-14 8.9E-19 140.9 29.8 241 147-417 42-323 (347)
157 3pe7_A Oligogalacturonate lyas 99.7 6.1E-15 2.1E-19 147.1 24.7 274 150-452 41-381 (388)
158 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.1E-14 1.4E-18 141.8 30.5 266 156-452 4-340 (365)
159 3scy_A Hypothetical bacterial 99.7 1E-13 3.4E-18 137.6 32.0 249 147-420 52-346 (361)
160 2oit_A Nucleoporin 214KDA; NH2 99.7 1.5E-15 5E-20 157.3 17.7 161 240-414 97-279 (434)
161 3azo_A Aminopeptidase; POP fam 99.7 1.2E-14 4E-19 156.3 24.9 271 147-450 26-364 (662)
162 3scy_A Hypothetical bacterial 99.7 2.8E-13 9.6E-18 134.4 32.7 268 156-452 15-336 (361)
163 1z68_A Fibroblast activation p 99.6 7.6E-16 2.6E-20 167.4 14.9 272 147-451 62-441 (719)
164 3fvz_A Peptidyl-glycine alpha- 99.6 7.6E-13 2.6E-17 130.9 27.5 259 147-452 26-321 (329)
165 3pe7_A Oligogalacturonate lyas 99.6 3.5E-13 1.2E-17 134.3 25.2 260 166-452 12-328 (388)
166 4a5s_A Dipeptidyl peptidase 4 99.6 2.6E-14 9E-19 156.9 17.2 232 198-451 22-351 (740)
167 2oiz_A Aromatic amine dehydrog 99.6 1.7E-12 5.8E-17 130.7 27.9 254 162-452 29-333 (361)
168 2oit_A Nucleoporin 214KDA; NH2 99.6 2.4E-13 8.2E-18 140.6 21.7 199 240-452 41-277 (434)
169 3c5m_A Oligogalacturonate lyas 99.6 2.8E-13 9.4E-18 134.7 21.4 272 147-451 38-380 (396)
170 1jof_A Carboxy-CIS,CIS-muconat 99.5 2.9E-12 9.8E-17 128.2 25.9 246 147-414 42-342 (365)
171 2gop_A Trilobed protease; beta 99.5 1.4E-11 4.8E-16 120.8 28.5 257 147-451 17-329 (347)
172 1q7f_A NHL, brain tumor CG1071 99.5 1.8E-10 6.3E-15 110.1 31.9 237 147-414 32-281 (286)
173 2oiz_A Aromatic amine dehydrog 99.4 1.8E-10 6.1E-15 115.9 30.2 269 149-436 54-360 (361)
174 2bkl_A Prolyl endopeptidase; m 99.4 3E-11 1E-15 131.6 24.6 239 146-421 122-404 (695)
175 1q7f_A NHL, brain tumor CG1071 99.4 2.2E-10 7.6E-15 109.6 27.9 230 194-452 31-279 (286)
176 2xdw_A Prolyl endopeptidase; a 99.4 2.3E-10 7.8E-15 124.8 30.9 233 194-452 126-413 (710)
177 3azo_A Aminopeptidase; POP fam 99.4 1.9E-11 6.6E-16 131.2 21.6 237 153-423 89-379 (662)
178 3c5m_A Oligogalacturonate lyas 99.4 3.8E-11 1.3E-15 119.1 20.6 268 168-452 14-328 (396)
179 3dsm_A Uncharacterized protein 99.4 3.8E-10 1.3E-14 111.6 27.6 267 161-452 14-301 (328)
180 2bkl_A Prolyl endopeptidase; m 99.3 2.6E-10 8.9E-15 124.2 26.8 270 152-452 77-396 (695)
181 2dg1_A DRP35, lactonase; beta 99.3 3.4E-10 1.2E-14 110.6 24.6 254 147-441 8-297 (333)
182 2xdw_A Prolyl endopeptidase; a 99.3 6.3E-10 2.2E-14 121.3 28.9 237 146-416 126-417 (710)
183 3e5z_A Putative gluconolactona 99.3 7.4E-10 2.5E-14 106.8 25.9 221 195-444 30-278 (296)
184 2gop_A Trilobed protease; beta 99.3 6.9E-10 2.3E-14 108.7 25.6 217 194-451 16-289 (347)
185 3no2_A Uncharacterized protein 99.2 2.7E-09 9.4E-14 103.4 24.6 208 155-441 6-230 (276)
186 1qks_A Cytochrome CD1 nitrite 99.2 5.2E-08 1.8E-12 104.3 36.6 272 155-452 168-476 (567)
187 1yr2_A Prolyl oligopeptidase; 99.2 4.9E-09 1.7E-13 115.0 28.5 272 151-452 115-440 (741)
188 3fvz_A Peptidyl-glycine alpha- 99.2 3.4E-09 1.2E-13 104.4 22.1 188 240-452 28-276 (329)
189 3e5z_A Putative gluconolactona 99.1 2.3E-08 7.9E-13 96.2 26.9 228 147-415 30-288 (296)
190 3dsm_A Uncharacterized protein 99.1 2.2E-08 7.7E-13 98.8 27.4 235 147-421 46-309 (328)
191 2mad_H Methylamine dehydrogena 99.1 1.7E-07 5.8E-12 94.8 34.4 250 165-452 48-349 (373)
192 3no2_A Uncharacterized protein 99.1 7.4E-09 2.5E-13 100.4 22.4 175 253-451 8-193 (276)
193 2z2n_A Virginiamycin B lyase; 99.1 1.1E-06 3.9E-11 83.0 35.2 263 147-450 17-292 (299)
194 1yr2_A Prolyl oligopeptidase; 99.1 4.5E-08 1.6E-12 107.3 28.1 240 146-421 164-448 (741)
195 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2.2E-07 7.5E-12 92.5 30.1 272 147-450 96-375 (376)
196 1rwi_B Serine/threonine-protei 99.0 4.6E-08 1.6E-12 92.1 23.5 229 195-452 26-263 (270)
197 2dg1_A DRP35, lactonase; beta 99.0 2.3E-07 7.9E-12 90.2 29.1 221 147-403 47-299 (333)
198 3q7m_A Lipoprotein YFGL, BAMB; 99.0 5.6E-07 1.9E-11 89.6 31.1 271 152-451 51-335 (376)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.9E-07 6.5E-12 89.7 26.6 231 196-452 21-298 (314)
200 1yiq_A Quinohemoprotein alcoho 99.0 2.8E-07 9.7E-12 100.7 30.7 286 153-452 69-504 (689)
201 1qks_A Cytochrome CD1 nitrite 99.0 1.8E-06 6E-11 92.4 35.8 272 147-452 199-537 (567)
202 1rwi_B Serine/threonine-protei 99.0 6.6E-08 2.3E-12 90.9 21.6 232 147-415 26-266 (270)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 5.1E-07 1.7E-11 86.6 27.4 236 147-413 20-299 (314)
204 3hrp_A Uncharacterized protein 98.9 8E-07 2.7E-11 90.9 27.7 186 241-451 176-408 (409)
205 1kb0_A Quinohemoprotein alcoho 98.9 1.3E-06 4.5E-11 95.3 30.3 283 153-452 76-506 (677)
206 3iuj_A Prolyl endopeptidase; h 98.9 1.8E-07 6E-12 102.0 23.0 192 241-452 134-358 (693)
207 1kb0_A Quinohemoprotein alcoho 98.9 1.5E-06 5E-11 94.8 30.3 278 149-439 123-535 (677)
208 2qc5_A Streptogramin B lactona 98.9 2.2E-05 7.5E-10 74.1 34.7 264 147-451 22-298 (300)
209 3iuj_A Prolyl endopeptidase; h 98.9 6.7E-07 2.3E-11 97.4 27.3 230 194-452 130-404 (693)
210 1yiq_A Quinohemoprotein alcoho 98.8 1.6E-06 5.6E-11 94.6 29.7 276 150-439 117-533 (689)
211 3sjl_D Methylamine dehydrogena 98.8 2.8E-06 9.4E-11 86.6 28.6 253 163-452 58-362 (386)
212 3g4e_A Regucalcin; six bladed 98.8 2.9E-06 9.9E-11 82.0 27.3 207 204-438 27-256 (297)
213 2hz6_A Endoplasmic reticulum t 98.8 1E-08 3.5E-13 103.4 9.1 189 150-382 5-202 (369)
214 2z2n_A Virginiamycin B lyase; 98.7 1.3E-05 4.5E-10 75.6 28.7 226 194-451 16-253 (299)
215 2hz6_A Endoplasmic reticulum t 98.7 6.9E-09 2.4E-13 104.7 4.8 189 198-421 5-200 (369)
216 3c75_H MADH, methylamine dehyd 98.7 3.4E-06 1.2E-10 87.0 23.3 252 164-452 99-401 (426)
217 3g4e_A Regucalcin; six bladed 98.6 1.2E-05 4.2E-10 77.5 25.6 192 241-451 18-227 (297)
218 1xip_A Nucleoporin NUP159; bet 98.6 2.3E-06 8E-11 87.2 19.5 168 195-401 40-231 (388)
219 1kv9_A Type II quinohemoprotei 98.6 3.6E-05 1.2E-09 83.7 29.0 284 153-452 65-487 (668)
220 2qe8_A Uncharacterized protein 98.5 3.4E-06 1.2E-10 83.5 18.8 252 147-441 19-308 (343)
221 1xip_A Nucleoporin NUP159; bet 98.5 5.2E-06 1.8E-10 84.6 19.7 175 240-440 42-230 (388)
222 2ghs_A AGR_C_1268P; regucalcin 98.5 3.6E-05 1.2E-09 75.6 24.8 188 241-451 54-258 (326)
223 2mad_H Methylamine dehydrogena 98.5 0.00024 8.2E-09 71.5 31.0 250 149-420 70-357 (373)
224 1mda_H Methylamine dehydrogena 98.4 6.4E-06 2.2E-10 83.4 18.1 251 156-452 34-345 (368)
225 3dr2_A Exported gluconolactona 98.4 0.0001 3.6E-09 71.1 26.0 221 196-445 48-299 (305)
226 2ghs_A AGR_C_1268P; regucalcin 98.4 8.7E-05 3E-09 72.8 25.7 207 204-441 63-290 (326)
227 2qc5_A Streptogramin B lactona 98.4 0.00042 1.4E-08 65.1 28.9 226 194-451 21-258 (300)
228 1fs1_A SKP2 F-BOX, cyclin A/CD 98.4 4.5E-08 1.5E-12 70.9 -0.0 47 43-93 6-52 (53)
229 3sjl_D Methylamine dehydrogena 98.3 0.00015 5.1E-09 73.8 24.8 241 162-426 107-378 (386)
230 2iwa_A Glutamine cyclotransfer 98.3 0.00032 1.1E-08 67.7 25.3 184 241-451 26-235 (266)
231 3l2o_B F-box only protein 4; s 98.3 2.2E-07 7.4E-12 90.5 2.9 49 45-97 4-52 (312)
232 2e31_A FBS1, F-box only protei 98.3 2.7E-07 9.1E-12 90.5 2.7 74 46-124 51-129 (297)
233 3dr2_A Exported gluconolactona 98.3 0.00037 1.3E-08 67.2 25.1 215 147-403 47-296 (305)
234 1kv9_A Type II quinohemoprotei 98.2 0.0012 4E-08 71.7 31.0 274 150-437 113-514 (668)
235 2qe8_A Uncharacterized protein 98.2 3.8E-05 1.3E-09 75.9 16.1 192 240-451 21-276 (343)
236 3hxj_A Pyrrolo-quinoline quino 98.2 0.00017 5.7E-09 69.3 20.2 255 147-451 62-322 (330)
237 3hrp_A Uncharacterized protein 98.1 0.00027 9.4E-09 71.9 21.2 182 240-451 135-352 (409)
238 3hxj_A Pyrrolo-quinoline quino 98.1 0.00011 3.7E-09 70.7 17.0 252 150-450 25-281 (330)
239 2ad6_A Methanol dehydrogenase 98.1 0.0032 1.1E-07 67.0 29.7 112 153-273 61-189 (571)
240 2ad6_A Methanol dehydrogenase 98.1 0.00084 2.9E-08 71.5 25.1 77 363-440 444-523 (571)
241 3nol_A Glutamine cyclotransfer 98.0 0.0014 4.8E-08 62.9 23.6 172 241-441 48-243 (262)
242 2ece_A 462AA long hypothetical 97.9 0.0015 5.3E-08 67.4 23.0 162 260-441 164-398 (462)
243 1flg_A Protein (quinoprotein e 97.9 0.019 6.4E-07 61.2 31.9 217 154-382 68-365 (582)
244 3mbr_X Glutamine cyclotransfer 97.9 0.0061 2.1E-07 57.8 24.8 172 241-441 26-222 (243)
245 3c75_H MADH, methylamine dehyd 97.9 0.0018 6.1E-08 66.6 22.2 234 162-420 147-409 (426)
246 3nok_A Glutaminyl cyclase; bet 97.8 0.0031 1.1E-07 60.7 22.0 171 241-441 60-253 (268)
247 1mda_H Methylamine dehydrogena 97.8 0.00036 1.2E-08 70.4 15.9 236 162-425 94-358 (368)
248 1w6s_A Methanol dehydrogenase 97.7 0.028 9.6E-07 60.2 29.9 112 154-273 62-195 (599)
249 2iwa_A Glutamine cyclotransfer 97.7 0.028 9.6E-07 54.0 26.2 192 147-413 23-237 (266)
250 3nol_A Glutamine cyclotransfer 97.6 0.03 1E-06 53.7 24.8 182 145-402 43-243 (262)
251 1flg_A Protein (quinoprotein e 97.6 0.011 3.9E-07 62.9 24.3 76 363-439 466-544 (582)
252 3nok_A Glutaminyl cyclase; bet 97.6 0.0061 2.1E-07 58.6 19.6 180 146-402 56-253 (268)
253 1w6s_A Methanol dehydrogenase 97.5 0.037 1.3E-06 59.3 26.4 75 363-438 453-530 (599)
254 2ece_A 462AA long hypothetical 97.4 0.01 3.5E-07 61.3 19.3 192 245-452 93-351 (462)
255 3mbr_X Glutamine cyclotransfer 97.4 0.1 3.5E-06 49.4 24.7 182 145-402 21-222 (243)
256 2xe4_A Oligopeptidase B; hydro 97.3 0.028 9.7E-07 61.5 23.5 236 146-416 175-461 (751)
257 1fwx_A Nitrous oxide reductase 97.3 0.021 7E-07 60.9 21.5 243 149-415 91-433 (595)
258 1k3i_A Galactose oxidase precu 97.2 0.1 3.5E-06 55.9 25.8 108 153-271 197-325 (656)
259 2xe4_A Oligopeptidase B; hydro 97.1 0.041 1.4E-06 60.3 21.9 188 241-449 179-394 (751)
260 1k3i_A Galactose oxidase precu 96.7 0.13 4.4E-06 55.2 21.0 235 201-452 197-496 (656)
261 2fp8_A Strictosidine synthase; 96.6 0.28 9.6E-06 47.0 21.2 192 241-441 24-246 (322)
262 2p4o_A Hypothetical protein; p 96.6 0.53 1.8E-05 44.9 23.2 181 240-451 36-240 (306)
263 4a2l_A BT_4663, two-component 96.5 1.2 4.2E-05 48.4 36.2 279 147-451 265-569 (795)
264 2fp8_A Strictosidine synthase; 96.3 0.85 2.9E-05 43.5 25.2 228 198-452 24-312 (322)
265 4a2l_A BT_4663, two-component 96.2 1.8 6.2E-05 47.0 36.7 277 147-451 217-524 (795)
266 1npe_A Nidogen, entactin; glyc 96.1 0.82 2.8E-05 42.3 29.9 195 195-421 38-246 (267)
267 1fwx_A Nitrous oxide reductase 96.1 0.32 1.1E-05 51.8 19.5 146 306-452 103-307 (595)
268 1npe_A Nidogen, entactin; glyc 96.0 0.93 3.2E-05 41.9 30.1 189 240-451 40-236 (267)
269 3v9f_A Two-component system se 93.9 8.4 0.00029 41.6 31.6 281 147-451 213-522 (781)
270 2ast_B S-phase kinase-associat 93.9 0.0045 1.5E-07 60.2 -2.7 45 46-94 9-53 (336)
271 3v9f_A Two-component system se 93.7 9 0.00031 41.3 32.6 280 147-450 260-565 (781)
272 4hw6_A Hypothetical protein, I 91.8 12 0.0004 37.8 19.7 145 240-412 143-303 (433)
273 3v65_B Low-density lipoprotein 90.8 14 0.00046 36.5 28.7 234 148-421 80-326 (386)
274 3tc9_A Hypothetical hydrolase; 90.5 15 0.00052 36.8 18.8 150 297-451 139-299 (430)
275 2p4o_A Hypothetical protein; p 90.0 13 0.00043 35.0 28.8 215 195-439 34-273 (306)
276 3tc9_A Hypothetical hydrolase; 89.9 14 0.00049 37.0 17.9 145 240-412 141-300 (430)
277 2p9w_A MAL S 1 allergenic prot 89.0 18 0.00063 35.4 20.9 154 241-414 18-216 (334)
278 2p1m_B Transport inhibitor res 87.8 0.16 5.4E-06 53.1 1.5 38 43-83 3-40 (594)
279 3f7f_A Nucleoporin NUP120; nuc 87.4 0.79 2.7E-05 49.8 6.6 36 146-181 223-258 (729)
280 4hw6_A Hypothetical protein, I 87.0 19 0.00065 36.2 16.6 149 297-451 141-302 (433)
281 3amr_A 3-phytase; beta-propell 86.7 26 0.00089 34.6 21.3 88 364-452 154-262 (355)
282 3amr_A 3-phytase; beta-propell 86.5 24 0.0008 34.9 16.3 138 306-452 41-207 (355)
283 3m0c_C LDL receptor, low-densi 85.6 46 0.0016 36.4 31.5 240 148-421 388-640 (791)
284 3m0c_C LDL receptor, low-densi 83.8 55 0.0019 35.8 26.2 199 147-379 426-639 (791)
285 1n7d_A LDL receptor, low-densi 82.9 6.8 0.00023 42.3 11.5 222 163-421 385-622 (699)
286 3kya_A Putative phosphatase; s 82.7 38 0.0013 34.9 16.6 151 297-451 141-339 (496)
287 1n7d_A LDL receptor, low-densi 82.5 4.1 0.00014 44.0 9.6 197 148-379 409-621 (699)
288 3v64_C Agrin; beta propeller, 81.7 39 0.0013 32.6 29.3 233 148-421 37-283 (349)
289 3v65_B Low-density lipoprotein 78.6 52 0.0018 32.1 28.4 186 240-450 120-315 (386)
290 3p5b_L Low density lipoprotein 77.8 56 0.0019 32.1 31.5 236 149-421 77-328 (400)
291 3p5b_L Low density lipoprotein 76.8 60 0.002 31.9 26.7 199 147-380 114-328 (400)
292 4gq2_M Nucleoporin NUP120; bet 72.2 5.8 0.0002 44.5 7.2 35 147-181 238-274 (950)
293 4hfx_A Transcription elongatio 71.7 2.9 9.8E-05 33.6 3.2 47 66-114 26-73 (97)
294 4fhn_B Nucleoporin NUP120; pro 65.7 4.8 0.00016 46.1 4.8 29 153-181 248-276 (1139)
295 3ogk_B Coronatine-insensitive 63.1 1.4 4.8E-05 45.7 -0.2 34 47-83 14-47 (592)
296 1ijq_A LDL receptor, low-densi 61.1 1.1E+02 0.0037 28.7 31.3 221 164-421 10-246 (316)
297 3v64_C Agrin; beta propeller, 60.2 1.2E+02 0.0041 28.9 28.3 149 240-414 77-235 (349)
298 2vpj_A Kelch-like protein 12; 59.9 1E+02 0.0035 28.1 19.5 67 149-221 58-137 (301)
299 2xbg_A YCF48-like protein; pho 57.9 1.3E+02 0.0043 28.4 29.4 259 147-450 38-319 (327)
300 3sov_A LRP-6, low-density lipo 55.5 1.4E+02 0.0048 28.2 25.6 150 240-413 39-197 (318)
301 3ii7_A Kelch-like protein 7; p 53.4 1.3E+02 0.0046 27.4 23.6 59 157-221 15-79 (306)
302 2ism_A Putative oxidoreductase 50.2 1.8E+02 0.006 27.8 15.6 188 241-452 36-296 (352)
303 3sov_A LRP-6, low-density lipo 49.5 1.7E+02 0.0059 27.5 26.2 218 163-421 12-246 (318)
304 3ii7_A Kelch-like protein 7; p 48.0 1.6E+02 0.0056 26.8 20.8 67 149-221 51-127 (306)
305 3ei3_A DNA damage-binding prot 47.9 3.6E+02 0.012 30.7 34.2 86 364-452 808-912 (1158)
306 3qqz_A Putative uncharacterize 46.0 97 0.0033 28.8 9.5 76 377-453 20-100 (255)
307 2be1_A Serine/threonine-protei 43.8 1.2E+02 0.0042 29.4 10.3 107 155-273 11-134 (339)
308 4gq2_M Nucleoporin NUP120; bet 42.8 34 0.0012 38.3 6.7 35 386-420 238-273 (950)
309 4a0p_A LRP6, LRP-6, low-densit 39.8 3.5E+02 0.012 28.3 25.2 184 240-450 41-234 (628)
310 4fhn_B Nucleoporin NUP120; pro 39.4 27 0.00092 39.8 5.3 35 386-420 240-275 (1139)
311 2xn4_A Kelch-like protein 2; s 39.2 2.2E+02 0.0076 25.8 24.3 100 314-416 173-279 (302)
312 3f7f_A Nucleoporin NUP120; nuc 38.9 1.3E+02 0.0043 32.7 10.0 37 338-381 223-259 (729)
313 2xn4_A Kelch-like protein 2; s 38.3 2.3E+02 0.0078 25.7 17.4 136 315-452 125-275 (302)
314 1zgk_A Kelch-like ECH-associat 33.1 2.8E+02 0.0097 25.3 21.0 67 149-221 20-99 (308)
315 3ei3_A DNA damage-binding prot 31.8 6.2E+02 0.021 28.8 21.5 126 314-451 864-997 (1158)
316 1ijq_A LDL receptor, low-densi 31.8 3.1E+02 0.011 25.4 30.1 152 240-413 34-195 (316)
317 1tl2_A L10, protein (tachylect 31.1 3.2E+02 0.011 25.2 11.0 57 298-356 91-154 (236)
318 4a0p_A LRP6, LRP-6, low-densit 29.8 5E+02 0.017 27.1 25.5 150 147-325 39-199 (628)
319 1zgk_A Kelch-like ECH-associat 29.5 3.3E+02 0.011 24.8 15.2 134 314-452 90-239 (308)
320 2xbg_A YCF48-like protein; pho 28.4 3.6E+02 0.012 25.0 26.1 144 147-320 82-231 (327)
321 3sre_A PON1, serum paraoxonase 27.1 4.4E+02 0.015 25.5 17.6 23 430-452 227-251 (355)
322 2vpj_A Kelch-like protein 12; 26.1 3.6E+02 0.012 24.2 19.1 135 314-452 78-230 (301)
323 2xzh_A Clathrin heavy chain 1; 24.8 5E+02 0.017 25.5 16.5 142 299-452 71-235 (365)
324 2be1_A Serine/threonine-protei 24.2 2E+02 0.0069 27.8 8.0 107 306-421 12-138 (339)
325 3pbp_A Nucleoporin NUP82; beta 23.7 5.8E+02 0.02 25.8 11.8 67 385-452 67-157 (452)
326 3a9g_A Putative uncharacterize 22.8 4.9E+02 0.017 24.7 17.9 189 241-452 34-295 (354)
327 1cru_A Protein (soluble quinop 21.8 5.9E+02 0.02 25.2 11.6 28 240-271 31-59 (454)
328 3s94_A LRP-6, low-density lipo 21.0 7.1E+02 0.024 25.8 22.4 151 240-414 44-203 (619)
No 1
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9e-51 Score=418.17 Aligned_cols=363 Identities=16% Similarity=0.284 Sum_probs=307.9
Q ss_pred cccccCCcchHHHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhccCCchhHHHhhhhcc-CC-----------CCc
Q 046773 36 AVNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRIW-GR-----------TNL 103 (453)
Q Consensus 36 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l~~~~~~w~~~~~~~~-~~-----------~~~ 103 (453)
.++..++.||++.||.|+..+|++||+ +++|+.++|||+.|+.+++++.+|+++|++.. .. ...
T Consensus 9 ~~~~~~~~d~~~~lp~e~~~~i~~~l~----~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (445)
T 2ovr_B 9 VIEPQFQRDFISLLPKELALYVLSFLE----PKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 84 (445)
T ss_dssp HHCCCCCCSTTTSSCHHHHHHHHTTSC----HHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCC
T ss_pred hcCccccCChhHHCCHHHHHHHHHhCC----HHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCc
Confidence 355677899999999999999999987 78999999999999999999999999997542 10 122
Q ss_pred CcchhHHHHHHHhhhhhcccccCceeeEEeeCCCCCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCC
Q 046773 104 LHATWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQ 183 (453)
Q Consensus 104 ~~~~Wk~~y~~~~~~~~nw~~g~~~~~~~~~~~~gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh 183 (453)
...+||..|.+++++++||+.+.+++.... .||. +.+ +.|++|++++||||+.|++|+|||+.++++++++.+|
T Consensus 85 ~~~~wk~~~~~~~~~~~~w~~~~~~~~~~l---~~h~--~~v-~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 158 (445)
T 2ovr_B 85 IHSPWKSAYIRQHRIDTNWRRGELKSPKVL---KGHD--DHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH 158 (445)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSCCCCCEEE---ECST--TSC-EEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCC
T ss_pred cCCcHHHHHhhhhhhhhcccCCCcceeEEe---cccC--CCc-EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCC
Confidence 457899999999999999999999755322 2897 445 5799999999999999999999999999999999987
Q ss_pred CCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCe
Q 046773 184 HSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRA 261 (453)
Q Consensus 184 ~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~t 261 (453)
.. .|.+++|+++.|++|+.|++|++||+++ + +..+.+|...+. .++|+++ .|++|+.|++
T Consensus 159 ~~--------~v~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~----~~~~~~~-----~l~s~s~dg~ 220 (445)
T 2ovr_B 159 TG--------GVWSSQMRDNIIISGSTDRTLKVWNAET-GECIHTLYGHTSTVR----CMHLHEK-----RVVSGSRDAT 220 (445)
T ss_dssp SS--------CEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEE----EEEEETT-----EEEEEETTSE
T ss_pred CC--------CEEEEEecCCEEEEEeCCCeEEEEECCc-CcEEEEECCCCCcEE----EEEecCC-----EEEEEeCCCE
Confidence 64 6888999999999999999999999987 4 445556665543 4677643 3889999999
Q ss_pred EEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEE
Q 046773 262 FHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTS 341 (453)
Q Consensus 262 IrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~ 341 (453)
|++||+++++.+ ..+.+|..+|.++.++++.+++++.|++|++||+++++++....+|. ..+.+
T Consensus 221 i~~wd~~~~~~~--------------~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~v~~ 284 (445)
T 2ovr_B 221 LRVWDIETGQCL--------------HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT--NRVYS 284 (445)
T ss_dssp EEEEESSSCCEE--------------EEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCS--SCEEE
T ss_pred EEEEECCCCcEE--------------EEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCC--CceEE
Confidence 999999998843 34668889999999988778888889999999999988777666554 45678
Q ss_pred EEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe
Q 046773 342 VDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 342 ~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL 420 (453)
+.+++..+++++.|+ +++|||+.+++++..+..+...+..+. +++.++++++. ++|++||+.+++++.++
T Consensus 285 ~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 285 LQFDGIHVVSGSLDT-------SIRVWDVETGNCIHTLTGHQSLTSGME--LKDNILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp EEECSSEEEEEETTS-------CEEEEETTTCCEEEEECCCCSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEECCCEEEEEeCCC-------eEEEEECCCCCEEEEEcCCcccEEEEE--EeCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 888999999999999 999999999999999888876666554 45778888876 99999999999999999
Q ss_pred cc---cCCceEEEEecCCCEEEEE-eCCcEEEEecC
Q 046773 421 RE---RIGEEVIAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 421 ~g---h~~~~V~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+ |... |.++++++++|+++ .|++|+|||+.
T Consensus 356 ~~~~~~~~~-v~~~~~~~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 356 QGPNKHQSA-VTCLQFNKNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp CSTTSCSSC-EEEEEECSSEEEEEETTSEEEEEETT
T ss_pred ccCCCCCCC-EEEEEECCCEEEEEeCCCeEEEEECC
Confidence 87 7777 99999999999999 99999999975
No 2
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.7e-51 Score=421.89 Aligned_cols=366 Identities=17% Similarity=0.245 Sum_probs=302.9
Q ss_pred ccccCCcchHHHHHHH----HHHHHHhhhhhhHhHhhhhhHHhhcccchhccCCchhHHHhhhhccC-------------
Q 046773 37 VNEVWPEPFVEALAAQ----VAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRIWG------------- 99 (453)
Q Consensus 37 ~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l~~~~~~w~~~~~~~~~------------- 99 (453)
++..+++||++.||.| ++.+|++||+ +++|++++|||++|+.+++++.+|+++|.+.+.
T Consensus 2 ~~~~~~~d~~~~lp~e~~~~~~~~i~~~l~----~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 77 (435)
T 1p22_A 2 PAIMLQRDFITALPARGLDHIAENILSYLD----AKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRG 77 (435)
T ss_dssp CCCCSCCCHHHHTGGGTCHHHHHHHHTTCC----HHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSS
T ss_pred CChhhhcChHHHCCcchHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccc
Confidence 4567899999999999 9999999987 789999999999999999999999999976421
Q ss_pred --C---------CCcCcchh-HHHHH----HHhhhhhcccccCceeeEEeeCCCCCCCCCCeEEEEEEecCCEEEEEeCC
Q 046773 100 --R---------TNLLHATW-RDEYI----YRHRTAQNFRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFAD 163 (453)
Q Consensus 100 --~---------~~~~~~~W-k~~y~----~~~~~~~nw~~g~~~~~~~~~~~~gh~~~d~v~v~~lafs~~~LaSGS~D 163 (453)
. ...+..+| +..|. ...++++||+.+++....+... .+|.++ |+|++|++++||+|+.|
T Consensus 78 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~~----v~~~~~d~~~l~~g~~d 152 (435)
T 1p22_A 78 WGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCR-SETSKG----VYCLQYDDQKIVSGLRD 152 (435)
T ss_dssp GGGGCC---------CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECC-CSSCCC----EEEEECCSSEEEEEESS
T ss_pred hhhhhhccCCCCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecc-cCCCCc----EEEEEECCCEEEEEeCC
Confidence 0 00112233 33333 2346899999999987765532 356533 88999999999999999
Q ss_pred CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEE
Q 046773 164 GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLI 241 (453)
Q Consensus 164 ~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v 241 (453)
++|+|||+.++++++++.+|.. .|.+++|+++.|++|+.|++|+|||+.+ + +.++..|...+. .+
T Consensus 153 g~i~iwd~~~~~~~~~~~~h~~--------~v~~l~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~----~l 219 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTGHTG--------SVLCLQYDERVIITGSSDSTVRVWDVNT-GEMLNTLIHHCEAVL----HL 219 (435)
T ss_dssp SCEEEEESSSCCEEEEECCCSS--------CEEEEECCSSEEEEEETTSCEEEEESSS-CCEEEEECCCCSCEE----EE
T ss_pred CeEEEEeCCCCeEEEEEcCCCC--------cEEEEEECCCEEEEEcCCCeEEEEECCC-CcEEEEEcCCCCcEE----EE
Confidence 9999999999999999998764 6888999999999999999999999987 4 455556665543 47
Q ss_pred EEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEEC
Q 046773 242 DFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDL 321 (453)
Q Consensus 242 ~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl 321 (453)
+|+++ .|++|+.|++|+|||+++++... ....+.+|...|.++.++++.+++++.|++|++||+
T Consensus 220 ~~~~~-----~l~s~s~dg~i~vwd~~~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 220 RFNNG-----MMVTCSKDRSIAVWDMASPTDIT-----------LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp ECCTT-----EEEEEETTSCEEEEECSSSSCCE-----------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred EEcCC-----EEEEeeCCCcEEEEeCCCCCCce-----------eeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC
Confidence 78754 48999999999999999876210 013467888999999998887888889999999999
Q ss_pred CCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEE
Q 046773 322 RNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMC 401 (453)
Q Consensus 322 ~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~ 401 (453)
++++++....+|.. .+.++.++++.+++++.|+ +|+|||+.+++++.++..|...+..+.+ ++.+++++
T Consensus 284 ~~~~~~~~~~~~~~--~v~~~~~~~~~l~~g~~dg-------~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 284 STCEFVRTLNGHKR--GIACLQYRDRLVVSGSSDN-------TIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp TTCCEEEEEECCSS--CEEEEEEETTEEEEEETTS-------CEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred CcCcEEEEEcCCCC--cEEEEEeCCCEEEEEeCCC-------eEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 99988777766654 4678888899999999999 9999999999999999988888888776 77888888
Q ss_pred eC-CeEEEEECCCCe---------EEEEecccCCceEEEEecCCCEEEEE-eCCcEEEEecC
Q 046773 402 VE-GVIRVWEVEGGE---------YMYSFRERIGEEVIAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 402 s~-~tIrlWD~~tG~---------~l~tL~gh~~~~V~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+. ++|+|||+.+++ ++.++.+|.+. |.++++|+++|+++ .|++|+|||+.
T Consensus 353 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 353 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR-VFRLQFDEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC-CCCEEECSSCEEECCSSSEEEEEC--
T ss_pred eCCCcEEEEECCCCCCccccccchheeeccCCCCC-eEEEEeCCCEEEEEeCCCEEEEEECC
Confidence 77 999999998877 99999999998 99888899999999 99999999984
No 3
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-49 Score=409.28 Aligned_cols=382 Identities=13% Similarity=0.202 Sum_probs=306.9
Q ss_pred ccccCCcchHHHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhccCC-chhHHHhhhhccC----------------
Q 046773 37 VNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRS-DLLWHRLTRRIWG---------------- 99 (453)
Q Consensus 37 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l~~~-~~~w~~~~~~~~~---------------- 99 (453)
+++.+++||++.||.|++++|++||+ +++|++++|||+.|+.++++ +.+|+++|.+..-
T Consensus 6 ~~~~~~~d~~~~lp~~~~~~i~~~l~----~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (464)
T 3v7d_B 6 IKDNLKRDLITSLPFEISLKIFNYLQ----FEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQK 81 (464)
T ss_dssp ---CCCCCHHHHSCHHHHHHHHTTSC----HHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHH
T ss_pred cCcccccCChHHCCHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhcc
Confidence 56778999999999999999999987 78999999999999999998 8999999965320
Q ss_pred -CCCcCcchhHHHHHHHhhhhhcccccCceeeEEeeCCCCCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCeEEE
Q 046773 100 -RTNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVR 178 (453)
Q Consensus 100 -~~~~~~~~Wk~~y~~~~~~~~nw~~g~~~~~~~~~~~~gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~ 178 (453)
.......+|+..|.++....+||+.+.+.+....+. ||. +.+ +.|++|++++||||+.|++|+|||+.++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~--~h~--~~v-~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~ 156 (464)
T 3v7d_B 82 YPKLSQQDRLRLSFLENIFILKNWYNPKFVPQRTTLR--GHM--TSV-ITCLQFEDNYVITGADDKMIRVYDSINKKFLL 156 (464)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEE--CCS--SSC-EEEEEEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCcccchhhHHHHHHhhhhHhhhcCCCcCcceEEEc--CCC--CCc-EEEEEECCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 011234579999999999999999998876644443 897 445 57999999999999999999999999999999
Q ss_pred EecCCCCCccccccceEEEEEEcC-CeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEe--CCCceeeEE
Q 046773 179 TFRPQHSDRLGQFSRAVSGIIITD-SQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFT--GCSRYWVGL 253 (453)
Q Consensus 179 tl~gh~~~~~~~~s~~V~~i~f~g-~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs--~dg~~~~~L 253 (453)
++.+|.. .|.+++|++ ..|++|+.|++|+|||+++ + +..+.+|...+. .++|+ +++++ |
T Consensus 157 ~~~~h~~--------~V~~l~~~~~~~l~s~s~dg~i~vwd~~~-~~~~~~~~~h~~~v~----~l~~~~~~~~~~---l 220 (464)
T 3v7d_B 157 QLSGHDG--------GVWALKYAHGGILVSGSTDRTVRVWDIKK-GCCTHVFEGHNSTVR----CLDIVEYKNIKY---I 220 (464)
T ss_dssp EECCCSS--------CEEEEEECSTTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEE----EEEEEESSSCEE---E
T ss_pred EEeCCCc--------CEEEEEEcCCCEEEEEeCCCCEEEEECCC-CcEEEEECCCCCccE----EEEEecCCCCCE---E
Confidence 9998765 688899874 4899999999999999987 5 455556666553 36777 56665 8
Q ss_pred EEeeCCCeEEEeeCCCCcEEe--cccc-------cCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCC
Q 046773 254 YAGLAGRAFHIWDRQAEEVFV--GGDL-------TDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQ 324 (453)
Q Consensus 254 aSgS~D~tIrvWD~~tg~~~~--g~~l-------~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~ 324 (453)
++|+.|++|++||+++++... +... ...........+.+|...|.++..+++.+++++.|++|++||++++
T Consensus 221 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM 300 (464)
T ss_dssp EEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred EEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 899999999999999876211 0000 0000011124678899999999888877888888999999999999
Q ss_pred ceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-
Q 046773 325 GMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE- 403 (453)
Q Consensus 325 ~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~- 403 (453)
+++....+|...+...+++++++.+++++.|+ +|+|||+.+++++.++..|...+..+.++ +.++++++.
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg-------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISASMDT-------TIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEETTS-------CEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence 88777777877777777888899999999999 99999999999999999888888887765 678888877
Q ss_pred CeEEEEECCCCeEEEEecccCCceEEEEecCCCEEEEEeCCcEEEEecC
Q 046773 404 GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 404 ~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~lasg~D~~IklWDl~ 452 (453)
++|++||+.+++....+.......+.+|+|++++|+++.|++|+|||+.
T Consensus 372 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~ 420 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR 420 (464)
T ss_dssp SEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETT
T ss_pred CcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECC
Confidence 9999999999988777642222225589999999999889999999975
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-42 Score=357.06 Aligned_cols=273 Identities=14% Similarity=0.168 Sum_probs=236.2
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
||..+ |+|++|++ .+|||||.|++|+|||+.+++++++|.+|.. .|.+++|+ +..|++||.|++
T Consensus 106 gh~~~----V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~--------~V~~v~~~~~~~~l~sgs~D~~ 173 (410)
T 1vyh_C 106 GHRSP----VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD--------SVQDISFDHSGKLLASCSADMT 173 (410)
T ss_dssp CCSSC----EEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSS--------CEEEEEECTTSSEEEEEETTSC
T ss_pred ccCCc----EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCC--------cEEEEEEcCCCCEEEEEeCCCe
Confidence 89865 89999987 5999999999999999999999999998764 68888885 678999999999
Q ss_pred EEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeee
Q 046773 214 IHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTE 292 (453)
Q Consensus 214 IkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~ 292 (453)
|+|||+.+.. +.++.+|...|. .++|+|+|++ |+|||.|++|+|||+++++++ .++.+
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~----~v~~~p~~~~---l~s~s~D~~i~~wd~~~~~~~--------------~~~~~ 232 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVS----SVSIMPNGDH---IVSASRDKTIKMWEVQTGYCV--------------KTFTG 232 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEE----EEEECSSSSE---EEEEETTSEEEEEETTTCCEE--------------EEEEC
T ss_pred EEEEeCCCCceeEEEcCCCCCEE----EEEEeCCCCE---EEEEeCCCeEEEEECCCCcEE--------------EEEeC
Confidence 9999998722 455566766554 5899999986 889999999999999998854 35678
Q ss_pred eccceeEEEEcCCce--EEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEec--------------------CCEEE
Q 046773 293 FTEFVGRVRVTSHES--AVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVN--------------------AEAYI 350 (453)
Q Consensus 293 h~~~v~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~--------------------g~~l~ 350 (453)
|..+|.++.+++++. ++++.|++|++||++++++...+.+|...+...+|+|+ +..++
T Consensus 233 h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 312 (410)
T 1vyh_C 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 312 (410)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE
T ss_pred CCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE
Confidence 899999999998774 45567899999999999887777777666555555554 55799
Q ss_pred EEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE
Q 046773 351 VVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI 429 (453)
Q Consensus 351 s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~ 429 (453)
+++.|+ +|+|||+.+++++.++..|.+.|..+.+++++.++++++. ++|+|||+.+++++.++.+|.+. |+
T Consensus 313 sgs~D~-------~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~-v~ 384 (410)
T 1vyh_C 313 SGSRDK-------TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VT 384 (410)
T ss_dssp EEETTS-------EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSC-EE
T ss_pred EEeCCC-------eEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc-EE
Confidence 999999 9999999999999999999999999999999999999887 99999999999999999999998 88
Q ss_pred --EEecCCCEEEEE-eCCcEEEEec
Q 046773 430 --AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 430 --a~s~d~~~lasg-~D~~IklWDl 451 (453)
+|+|++.+|+|| .|++|+|||+
T Consensus 385 ~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 385 SLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 677999999999 9999999996
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=335.32 Aligned_cols=275 Identities=13% Similarity=0.175 Sum_probs=231.8
Q ss_pred CCCCCCCCeEEEEEEecC------CEEEEEeCCCcEEEEECCCCeE--EEEecCCCCCccccccceEEEEEEc--CCeEE
Q 046773 137 SDVDNPDGLTCRCLTLSD------LYLACGFADGAVRLFDLTTRLH--VRTFRPQHSDRLGQFSRAVSGIIIT--DSQLI 206 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~------~~LaSGS~D~TIrlWD~~tg~~--~~tl~gh~~~~~~~~s~~V~~i~f~--g~~La 206 (453)
.+|.++ |+|++|++ ++|||||.|++|||||+.++++ ..+|.||.. .|.+++|+ +..++
T Consensus 29 ~~H~~~----V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~--------~v~~~~~~~~~~~l~ 96 (321)
T 3ow8_A 29 QAHDDA----IWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL--------GVVSVDISHTLPIAA 96 (321)
T ss_dssp TSSSSC----EEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--------CEEEEEECSSSSEEE
T ss_pred ccCCCc----EEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC--------CEEEEEECCCCCEEE
Confidence 589855 88999964 4899999999999999988864 557888764 57778875 56899
Q ss_pred EEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcce
Q 046773 207 FATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTV 284 (453)
Q Consensus 207 sgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v 284 (453)
+||.|++|+|||+.+ + +..+..|...+. .++|+|+|++ |++|+.|++|+|||+++++..
T Consensus 97 s~s~D~~i~lWd~~~-~~~~~~~~~~~~~~~----~~~~spdg~~---l~~g~~dg~v~i~~~~~~~~~----------- 157 (321)
T 3ow8_A 97 SSSLDAHIRLWDLEN-GKQIKSIDAGPVDAW----TLAFSPDSQY---LATGTHVGKVNIFGVESGKKE----------- 157 (321)
T ss_dssp EEETTSEEEEEETTT-TEEEEEEECCTTCCC----CEEECTTSSE---EEEECTTSEEEEEETTTCSEE-----------
T ss_pred EEeCCCcEEEEECCC-CCEEEEEeCCCccEE----EEEECCCCCE---EEEEcCCCcEEEEEcCCCcee-----------
Confidence 999999999999987 5 333333433322 4899999996 889999999999999998732
Q ss_pred eeeeeeeeeccceeEEEEcCCce--EEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCc
Q 046773 285 MGWRMLTEFTEFVGRVRVTSHES--AVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNR 362 (453)
Q Consensus 285 ~~w~~l~~h~~~v~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~ 362 (453)
..+..|...|.+++|+|++. ++++.|++|+|||+++++++.++.+|...+...+|+|++..+++++.|+
T Consensus 158 ---~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg------ 228 (321)
T 3ow8_A 158 ---YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG------ 228 (321)
T ss_dssp ---EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTS------
T ss_pred ---EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC------
Confidence 23456778899999998874 4556789999999999988777777776666677888899999999999
Q ss_pred ceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEE
Q 046773 363 RLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVA 439 (453)
Q Consensus 363 ~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~la 439 (453)
+|+|||+.+++++.++..|...+..+.++|++.++++++. ++|+|||+.++++++++.+|.+. |+ +|+||+++|+
T Consensus 229 -~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~-v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 229 -YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-VWGVKYNGNGSKIV 306 (321)
T ss_dssp -CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEE
T ss_pred -eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc-EEEEEECCCCCEEE
Confidence 9999999999999999999988999999999999998887 99999999999999999999998 88 6789999999
Q ss_pred EE-eCCcEEEEecCC
Q 046773 440 AS-CGTNIHLWDFGA 453 (453)
Q Consensus 440 sg-~D~~IklWDl~~ 453 (453)
++ .|++|+|||+.+
T Consensus 307 s~~~d~~i~vwd~p~ 321 (321)
T 3ow8_A 307 SVGDDQEIHIYDCPI 321 (321)
T ss_dssp EEETTCCEEEEECC-
T ss_pred EEeCCCeEEEEeCCC
Confidence 99 999999999853
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.3e-41 Score=327.95 Aligned_cols=274 Identities=14% Similarity=0.159 Sum_probs=229.2
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~t 213 (453)
||.++ |++++|+| ++||||+.|++|||||++++++++++.+|.. .|.+++| +++.|++||.|++
T Consensus 11 ~h~~~----V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~s~s~d~~ 78 (304)
T 2ynn_A 11 NRSDR----VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET--------PVRAGKFIARKNWIIVGSDDFR 78 (304)
T ss_dssp EECSC----EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--------CEEEEEEEGGGTEEEEEETTSE
T ss_pred CCCCc----eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC--------cEEEEEEeCCCCEEEEECCCCE
Confidence 78844 89999986 6999999999999999999999999998654 4677766 4788999999999
Q ss_pred EEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeee
Q 046773 214 IHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 214 IkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~ 291 (453)
|+|||+++ + +..+.+|.+.|. .|+|+|++++ |+|||.|++|+|||++++..+. .++.
T Consensus 79 i~vwd~~~-~~~~~~~~~h~~~v~----~~~~~~~~~~---l~sgs~D~~v~lWd~~~~~~~~-------------~~~~ 137 (304)
T 2ynn_A 79 IRVFNYNT-GEKVVDFEAHPDYIR----SIAVHPTKPY---VLSGSDDLTVKLWNWENNWALE-------------QTFE 137 (304)
T ss_dssp EEEEETTT-CCEEEEEECCSSCEE----EEEECSSSSE---EEEEETTSCEEEEEGGGTTEEE-------------EEEC
T ss_pred EEEEECCC-CcEEEEEeCCCCcEE----EEEEcCCCCE---EEEECCCCeEEEEECCCCcchh-------------hhhc
Confidence 99999987 5 456677776654 5899999986 8899999999999998875321 3567
Q ss_pred eeccceeEEEEcCC-c--eEEEEcCCcEEEEECCCCceEEEE-eeccCCeEEEEEEe--cCCEEEEEeCCCccccCcceE
Q 046773 292 EFTEFVGRVRVTSH-E--SAVACTSSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDV--NAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 292 ~h~~~v~~v~~s~~-~--~~vas~d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~--~g~~l~s~s~dg~~~~~~~~i 365 (453)
+|..+|.+++|+|. + +++++.|++|+|||++++.+.... .+|...+...++.+ ++..+++++.|+ +|
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~-------~i 210 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL-------TI 210 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS-------EE
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC-------eE
Confidence 89999999999983 3 566678899999999987655444 44545555556665 456899999999 99
Q ss_pred EEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCC--EEEE
Q 046773 366 IVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDR--HVAA 440 (453)
Q Consensus 366 ~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~--~las 440 (453)
+|||+.+++++.++..|...+..+.++|++.++++++. ++|||||+.+++++++|..|.+. ++ ++.|++. +||+
T Consensus 211 ~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~as 289 (304)
T 2ynn_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-SWCIATHPTGRKNYIAS 289 (304)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSS-EEEEEECTTCGGGCEEE
T ss_pred EEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCcc-EEEEEECCCCCceEEEE
Confidence 99999999999999999999999999999999998887 99999999999999999999888 88 4567775 5888
Q ss_pred EeCCcEEEEecC
Q 046773 441 SCGTNIHLWDFG 452 (453)
Q Consensus 441 g~D~~IklWDl~ 452 (453)
|.|..+.+|+++
T Consensus 290 g~~~g~~~~~~~ 301 (304)
T 2ynn_A 290 GFDNGFTVLSLG 301 (304)
T ss_dssp EETTEEEEEECC
T ss_pred ecCCceEEEEec
Confidence 877778899875
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.7e-40 Score=325.69 Aligned_cols=272 Identities=13% Similarity=0.103 Sum_probs=230.2
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCC
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDG 212 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~ 212 (453)
.||.++ |+|++|++ ++|||||.|++|+|||+.+++++.++..|.. .|.+++|+ ++.|++|+.|+
T Consensus 52 ~gH~~~----v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~--------~v~~~~~s~~~~~l~s~~~d~ 119 (340)
T 1got_B 52 RGHLAK----IYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS--------WVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp CCCSSC----EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSS--------CEEEEEECTTSSEEEEEETTC
T ss_pred cCCCCc----eEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCc--------cEEEEEECCCCCEEEEEeCCC
Confidence 389855 88999986 5999999999999999999999999987654 57777775 67899999999
Q ss_pred CEEEEEeecCC-----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeee
Q 046773 213 DIHVAVIDDVA-----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGW 287 (453)
Q Consensus 213 tIkvWd~~~~g-----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w 287 (453)
+|++|++.+.. ...+.+|.+.+. .+.|+++++ |++++.|++|+|||+++++..
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~----l~s~s~d~~i~~wd~~~~~~~-------------- 177 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLS----CCRFLDDNQ----IVTSSGDTTCALWDIETGQQT-------------- 177 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEE----EEEEEETTE----EEEEETTSCEEEEETTTTEEE--------------
T ss_pred eEEEEECccCCCcceeEEEecCCCccEE----EEEECCCCc----EEEEECCCcEEEEECCCCcEE--------------
Confidence 99999987621 133445665543 478999886 689999999999999998843
Q ss_pred eeeeeeccceeEEEEcCCce--EEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceE
Q 046773 288 RMLTEFTEFVGRVRVTSHES--AVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 288 ~~l~~h~~~v~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i 365 (453)
.++.+|...|.+++|+|++. ++++.|++|++||++++.++.++.+|...+...+|+|+++.+++++.|+ ++
T Consensus 178 ~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~-------~v 250 (340)
T 1got_B 178 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA-------TC 250 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------CE
T ss_pred EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC-------cE
Confidence 34678899999999998763 4556789999999999988877778877777777888899999999999 99
Q ss_pred EEEEcCCCeeEEEEEecC--CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEE
Q 046773 366 IVRRVDTFEEVCRFSLRA--DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAA 440 (453)
Q Consensus 366 ~Iw~~~tg~~v~~l~~~~--~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~las 440 (453)
+|||+.+++++..+.... ..+..+.++|++.++++++. ++|+|||+.+++++.+|.+|.+. |. +|+||+++|+|
T Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~-v~~~~~s~dg~~l~s 329 (340)
T 1got_B 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVAT 329 (340)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEECTTSSCEEE
T ss_pred EEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCc-EEEEEEcCCCCEEEE
Confidence 999999998877765332 35888999999999998887 99999999999999999999998 88 67899999999
Q ss_pred E-eCCcEEEEe
Q 046773 441 S-CGTNIHLWD 450 (453)
Q Consensus 441 g-~D~~IklWD 450 (453)
| .|++|+|||
T Consensus 330 ~s~D~~i~iWd 340 (340)
T 1got_B 330 GSWDSFLKIWN 340 (340)
T ss_dssp EETTSCEEEEC
T ss_pred EcCCccEEecC
Confidence 9 999999997
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.9e-39 Score=318.16 Aligned_cols=272 Identities=15% Similarity=0.200 Sum_probs=226.6
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCC-----CeEEEEecCCCCCccccccceEEEEEEc--CCeEE
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTT-----RLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLI 206 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~t-----g~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~La 206 (453)
.||..+ |++++|++ ++|||||.|++|||||+.+ +.++++|.+|.. .|.+++|+ ++.|+
T Consensus 14 ~gH~~~----V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~--------~v~~~~~s~dg~~l~ 81 (319)
T 3frx_A 14 EGHNGW----VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH--------IVQDCTLTADGAYAL 81 (319)
T ss_dssp CCCSSC----EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS--------CEEEEEECTTSSEEE
T ss_pred ccccce----EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcc--------cEEEEEECCCCCEEE
Confidence 499855 89999975 6899999999999999864 456889998764 57778775 67899
Q ss_pred EEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcce
Q 046773 207 FATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTV 284 (453)
Q Consensus 207 sgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v 284 (453)
+||.|++|+|||+.+ + +..+.+|...|. .++|+|++++ |+|||.|++|+|||++....
T Consensus 82 s~s~D~~v~~wd~~~-~~~~~~~~~h~~~v~----~~~~~~~~~~---l~s~s~D~~i~vwd~~~~~~------------ 141 (319)
T 3frx_A 82 SASWDKTLRLWDVAT-GETYQRFVGHKSDVM----SVDIDKKASM---IISGSRDKTIKVWTIKGQCL------------ 141 (319)
T ss_dssp EEETTSEEEEEETTT-TEEEEEEECCSSCEE----EEEECTTSCE---EEEEETTSCEEEEETTSCEE------------
T ss_pred EEeCCCEEEEEECCC-CCeeEEEccCCCcEE----EEEEcCCCCE---EEEEeCCCeEEEEECCCCeE------------
Confidence 999999999999987 5 456677877664 5899999986 88999999999999975442
Q ss_pred eeeeeeeeeccceeEEEEcCCc--------eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCC
Q 046773 285 MGWRMLTEFTEFVGRVRVTSHE--------SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRE 356 (453)
Q Consensus 285 ~~w~~l~~h~~~v~~v~~s~~~--------~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg 356 (453)
.++.+|..+|.++++.|.. +++++.|++|++||++++++...+.+|...+...+++|+++.+++++.|+
T Consensus 142 ---~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg 218 (319)
T 3frx_A 142 ---ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG 218 (319)
T ss_dssp ---EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred ---EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 3466888999999998742 46667889999999999877666677877777777888899999999999
Q ss_pred ccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecc--------cCCceE
Q 046773 357 LENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRE--------RIGEEV 428 (453)
Q Consensus 357 ~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~g--------h~~~~V 428 (453)
+|+|||+.+++++.++..+ +.+..+.|+|++.+++++++..|++|++.++.++..+.. |... |
T Consensus 219 -------~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~-v 289 (319)
T 3frx_A 219 -------EIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPH-A 289 (319)
T ss_dssp -------EEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCC-E
T ss_pred -------eEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcc-e
Confidence 9999999999999888754 568999999998888777778899999999988887753 3344 5
Q ss_pred E--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 429 I--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 429 ~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
. +|+|||++|++| .|++|+|||+.
T Consensus 290 ~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eEEEECCCCCEEEEeecCceEEEEEEe
Confidence 5 788999999999 99999999974
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-39 Score=323.38 Aligned_cols=272 Identities=12% Similarity=0.133 Sum_probs=228.6
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~t 213 (453)
||.++ |+|++|++ ++|||||.|++|+|||+.++++.+++..|.. .|.+++| ++..|++|+.|++
T Consensus 62 gH~~~----V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~--------~v~~~~~sp~g~~lasg~~d~~ 129 (354)
T 2pbi_B 62 GHGNK----VLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCT--------WVMACAYAPSGCAIACGGLDNK 129 (354)
T ss_dssp CCSSC----EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS--------CCCEEEECTTSSEEEEESTTSE
T ss_pred CCCCe----EEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCC--------CEEEEEECCCCCEEEEeeCCCC
Confidence 89855 89999986 6999999999999999999999999987643 4555666 4779999999999
Q ss_pred EEEEEeecC---C----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceee
Q 046773 214 IHVAVIDDV---A----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMG 286 (453)
Q Consensus 214 IkvWd~~~~---g----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~ 286 (453)
|++|++... + ...+..|.+.+. .++|+|+++. |++||.|++|+|||+++++.+
T Consensus 130 i~v~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~---l~t~s~D~~v~lwd~~~~~~~------------- 189 (354)
T 2pbi_B 130 CSVYPLTFDKNENMAAKKKSVAMHTNYLS----ACSFTNSDMQ---ILTASGDGTCALWDVESGQLL------------- 189 (354)
T ss_dssp EEEEECCCCTTCCSGGGCEEEEECSSCEE----EEEECSSSSE---EEEEETTSEEEEEETTTCCEE-------------
T ss_pred EEEEEEeccccccccccceeeeccCCcEE----EEEEeCCCCE---EEEEeCCCcEEEEeCCCCeEE-------------
Confidence 999998641 1 244556766553 4899999986 889999999999999999853
Q ss_pred eeeeeeeccceeEEEEcCC----ceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCc
Q 046773 287 WRMLTEFTEFVGRVRVTSH----ESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNR 362 (453)
Q Consensus 287 w~~l~~h~~~v~~v~~s~~----~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~ 362 (453)
+++.+|...|.++.++|. .+++++.|++|++||+++++++..+.+|...+...+|+|+++.+++++.|+
T Consensus 190 -~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~------ 262 (354)
T 2pbi_B 190 -QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA------ 262 (354)
T ss_dssp -EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS------
T ss_pred -EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC------
Confidence 356788899999999763 356667789999999999998877777777666667788899999999999
Q ss_pred ceEEEEEcCCCeeEEEEEecC--CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCE
Q 046773 363 RLAIVRRVDTFEEVCRFSLRA--DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRH 437 (453)
Q Consensus 363 ~~i~Iw~~~tg~~v~~l~~~~--~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~ 437 (453)
+++|||+.+++++..+..+. ..+..+.+++++.++++++. ++|+|||+.+++++.+|.+|.+. |+ +|+||+++
T Consensus 263 -~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~-v~~l~~spdg~~ 340 (354)
T 2pbi_B 263 -TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR-VSTLRVSPDGTA 340 (354)
T ss_dssp -CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC-EEEEEECTTSSC
T ss_pred -eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCc-EEEEEECCCCCE
Confidence 99999999988777665432 24678899999999988887 99999999999999999999998 87 67899999
Q ss_pred EEEE-eCCcEEEEe
Q 046773 438 VAAS-CGTNIHLWD 450 (453)
Q Consensus 438 lasg-~D~~IklWD 450 (453)
|+|+ .|++|+||+
T Consensus 341 l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 341 FCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEecC
Confidence 9999 999999996
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-39 Score=328.22 Aligned_cols=281 Identities=12% Similarity=0.145 Sum_probs=226.2
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCC
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDG 212 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~ 212 (453)
.||..+ |+|++|++ ++|||||.|++|||||+.++++++++.+|.. .|.+++| +++.|++|+.|+
T Consensus 63 ~gH~~~----V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~--------~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 63 QGHSGK----VYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP--------WVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp CCCSSC----EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT--------TCCCCEECTTSSEEEECCSSS
T ss_pred cccccE----EEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC--------CEEEEEECCCCCEEEEeeCCC
Confidence 389855 89999986 5899999999999999999999999998764 3444555 578999999999
Q ss_pred CEEEEEeecC----C----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcce
Q 046773 213 DIHVAVIDDV----A----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTV 284 (453)
Q Consensus 213 tIkvWd~~~~----g----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v 284 (453)
+|+|||+.+. + ..++.+|.+.+. .+.|.|++.. .|+|||.|++|+|||+++++.+.--.
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~----~~~~~~~~~~--~l~s~s~D~~i~~wd~~~~~~~~~~~------- 197 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYAS----SCQYVPDQET--RLITGSGDQTCVLWDVTTGQRISIFG------- 197 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCC----CCBCCSSSSS--CEEEECTTSCEEEECTTTCCEEEEEC-------
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceE----EEEEecCCCC--EEEEECCCCcEEEEEcCCCcEEEEee-------
Confidence 9999998641 1 244566766553 3688887543 38899999999999999998431000
Q ss_pred eeeeeeeeeccceeEEEEcC-C--ceEEEEcCCcEEEEECCC-CceEEEEeeccCCeEEEEEEecCCEEEEEeCCCcccc
Q 046773 285 MGWRMLTEFTEFVGRVRVTS-H--ESAVACTSSRVITFDLRN-QGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQ 360 (453)
Q Consensus 285 ~~w~~l~~h~~~v~~v~~s~-~--~~~vas~d~tIrlWDl~t-~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~ 360 (453)
-....+|...|.++.+++ + .+++++.|++|+|||++. +.++..+.+|...+...+|+|++..+++++.|+
T Consensus 198 --~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~---- 271 (380)
T 3iz6_a 198 --SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG---- 271 (380)
T ss_dssp --CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSS----
T ss_pred --cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCC----
Confidence 011257888999999965 3 356667789999999984 455555677777666677888899999999999
Q ss_pred CcceEEEEEcCCCeeEEEEEecCC-------CeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe----cccCCceE
Q 046773 361 NRRLAIVRRVDTFEEVCRFSLRAD-------RNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF----RERIGEEV 428 (453)
Q Consensus 361 ~~~~i~Iw~~~tg~~v~~l~~~~~-------~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL----~gh~~~~V 428 (453)
+++|||+.+++++..+..++. .+..+.+++++.++++++. ++|+|||+.+++++..+ .+|.+. |
T Consensus 272 ---~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~-v 347 (380)
T 3iz6_a 272 ---TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGR-I 347 (380)
T ss_dssp ---CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCC-C
T ss_pred ---eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCc-e
Confidence 999999999999888765542 2778999999999998887 99999999999999888 688888 7
Q ss_pred E--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 429 I--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 429 ~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+ +|+||+++|+|| .|++|+|||+.
T Consensus 348 ~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 348 SCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 7 678999999999 99999999985
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=317.75 Aligned_cols=275 Identities=10% Similarity=0.048 Sum_probs=206.1
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccc---cccceEEEEEEcC-CeEEEEeCCCCEEEEEee
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLG---QFSRAVSGIIITD-SQLIFATLDGDIHVAVID 220 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~---~~s~~V~~i~f~g-~~LasgS~D~tIkvWd~~ 220 (453)
|.+++|++ .+|+++| |.++|+||...........++...... .....|.+++|++ ..|++||.|++|+|||++
T Consensus 33 v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~ 111 (344)
T 4gqb_B 33 LEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELD 111 (344)
T ss_dssp EEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEecc
Confidence 78999986 5888888 889999984321100000111100000 0012588899874 579999999999999998
Q ss_pred cCC-cce----EEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc
Q 046773 221 DVA-NET----RTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE 295 (453)
Q Consensus 221 ~~g-~~~----~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~ 295 (453)
+.. ... +.+|.+.|. .|+|+|||++ |+|||.|++|+|||+++++.+ +++.+|.+
T Consensus 112 ~~~~~~~~~~~~~~H~~~V~----~v~~spdg~~---l~sgs~d~~i~iwd~~~~~~~--------------~~~~~h~~ 170 (344)
T 4gqb_B 112 ENETLIVSKFCKYEHDDIVS----TVSVLSSGTQ---AVSGSKDICIKVWDLAQQVVL--------------SSYRAHAA 170 (344)
T ss_dssp TTSSCEEEEEEEECCSSCEE----EEEECTTSSE---EEEEETTSCEEEEETTTTEEE--------------EEECCCSS
T ss_pred CCCceeEeeccccCCCCCEE----EEEECCCCCE---EEEEeCCCeEEEEECCCCcEE--------------EEEcCcCC
Confidence 722 222 235666554 5999999996 889999999999999999854 45778999
Q ss_pred ceeEEEEcCCc--e-EEEEcCCcEEEEECCCCceEEEEe--eccCCeEEEEEEec-CCEEEEEeCCCccccCcceEEEEE
Q 046773 296 FVGRVRVTSHE--S-AVACTSSRVITFDLRNQGMVLGER--GYGRGLYVTSVDVN-AEAYIVVENRELENQNRRLAIVRR 369 (453)
Q Consensus 296 ~v~~v~~s~~~--~-~vas~d~tIrlWDl~t~~~~~~~~--g~~~~~~v~~~~~~-g~~l~s~s~dg~~~~~~~~i~Iw~ 369 (453)
.|.+++|++++ + ++++.|++|+|||+++++++..+. .+.+.....+++++ +..+++++.|+ +|+|||
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-------~v~~wd 243 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-------TVSLVD 243 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-------EEEEEE
T ss_pred ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-------cEEEEE
Confidence 99999999765 3 456778999999999998776653 33333333445554 35678899999 999999
Q ss_pred cCCCeeEEEEEecCCCeeEEEEeeCCC-eEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCC-EEEEE-eC
Q 046773 370 VDTFEEVCRFSLRADRNVNVMGCMNQG-YALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDR-HVAAS-CG 443 (453)
Q Consensus 370 ~~tg~~v~~l~~~~~~v~~~~~~~~~~-~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~-~lasg-~D 443 (453)
+.+++++.++..|.+.|..+.|+|++. ++++++. ++|||||+.+++++ .+.+|.+. |+ +|+||++ .|+|+ .|
T Consensus 244 ~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~-V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 244 TKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDF-VRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp SCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSC-EEEEEECSSSTTEEEEEETT
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCC-EEEEEEeCCCCeEEEEEcCC
Confidence 999999999999999999999999885 5667776 99999999999875 57899999 88 6779886 56788 99
Q ss_pred CcEEEEecC
Q 046773 444 TNIHLWDFG 452 (453)
Q Consensus 444 ~~IklWDl~ 452 (453)
++|++|++.
T Consensus 322 ~~v~~w~v~ 330 (344)
T 4gqb_B 322 HQVVHHVVP 330 (344)
T ss_dssp SCEEEEECC
T ss_pred CeEEEEECC
Confidence 999999975
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.1e-38 Score=312.23 Aligned_cols=273 Identities=11% Similarity=0.116 Sum_probs=215.9
Q ss_pred CCCCCCCeEEEEEEe--------cCCEEEEEeCCCcEEEEECCC-------CeEEEEecCCCCCccccccceEEEEEEc-
Q 046773 138 DVDNPDGLTCRCLTL--------SDLYLACGFADGAVRLFDLTT-------RLHVRTFRPQHSDRLGQFSRAVSGIIIT- 201 (453)
Q Consensus 138 gh~~~d~v~v~~laf--------s~~~LaSGS~D~TIrlWD~~t-------g~~~~tl~gh~~~~~~~~s~~V~~i~f~- 201 (453)
||.++ |+|++| ++++|||||.|++|||||+.+ +++.++|.+|.. .|.+++|+
T Consensus 19 gH~~~----V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~--------~V~~~~~~~ 86 (343)
T 2xzm_R 19 GHSDW----VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH--------FVSDLALSQ 86 (343)
T ss_dssp CCSSC----EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS--------CEEEEEECS
T ss_pred cchhh----hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC--------ceEEEEECC
Confidence 89855 889998 346999999999999999975 457788988764 58888885
Q ss_pred -CCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccc
Q 046773 202 -DSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDL 278 (453)
Q Consensus 202 -g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l 278 (453)
+..|++||.|++|+|||+.+ + +..+.+|...|. .|+|+|+|++ |++|+.|++|+|||+.....+.-
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~----~v~~sp~~~~---l~s~~~d~~i~~wd~~~~~~~~~--- 155 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRT-GTTYKRFVGHQSEVY----SVAFSPDNRQ---ILSAGAEREIKLWNILGECKFSS--- 155 (343)
T ss_dssp STTEEEEEETTSEEEEEETTS-SCEEEEEECCCSCEE----EEEECSSTTE---EEEEETTSCEEEEESSSCEEEEC---
T ss_pred CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcEE----EEEECCCCCE---EEEEcCCCEEEEEeccCCceeee---
Confidence 67899999999999999987 4 456677776654 4899999996 88999999999999985443210
Q ss_pred cCCcceeeeeeeeeeccceeEEEEcCCc------------eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecC
Q 046773 279 TDHNTVMGWRMLTEFTEFVGRVRVTSHE------------SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNA 346 (453)
Q Consensus 279 ~~~~~v~~w~~l~~h~~~v~~v~~s~~~------------~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g 346 (453)
....+|..+|.+++|+|+. +++++.|++|++||.. .++...+.+|...+...+|+|++
T Consensus 156 ---------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 156 ---------AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp ---------CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTS
T ss_pred ---------ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCC
Confidence 1123678899999999864 4566778999999954 45555567777767667788889
Q ss_pred CEEEEEeCCCccccCcceEEEEEcC-CCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEE--Eec--
Q 046773 347 EAYIVVENRELENQNRRLAIVRRVD-TFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMY--SFR-- 421 (453)
Q Consensus 347 ~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~--tL~-- 421 (453)
+.+++++.|+ +|+|||+. .......+. +...+..+.++|++.+++++++++|+|||+.+++++. ++.
T Consensus 226 ~~l~sgs~dg-------~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~ 297 (343)
T 2xzm_R 226 KYIATGGKDK-------KLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAE 297 (343)
T ss_dssp SEEEEEETTC-------EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCC
T ss_pred CEEEEEcCCC-------eEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecC
Confidence 9999999999 99999994 444444442 3455889999999877665666899999999887654 554
Q ss_pred ---------ccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 422 ---------ERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 422 ---------gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+|... |+ +|+||+++|++| .|++|+|||+.
T Consensus 298 ~~~~~~~~~~~~~~-v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 298 PITKAEGQKGKNPQ-CTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SGGGBTTBCCSCCC-EEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred cchhhhhhcCCCCc-eEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 67777 77 678999999999 99999999974
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-38 Score=310.57 Aligned_cols=276 Identities=14% Similarity=0.131 Sum_probs=206.1
Q ss_pred CCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCC--eEEEEe-cC-CCCCccccccceEEEEEEc--CCeEEEEeCC
Q 046773 138 DVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTR--LHVRTF-RP-QHSDRLGQFSRAVSGIIIT--DSQLIFATLD 211 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg--~~~~tl-~g-h~~~~~~~~s~~V~~i~f~--g~~LasgS~D 211 (453)
||..+ |+|++|++++|||||.|++|||||+.++ +++.++ .+ |.. .|.+++|+ +..|++||.|
T Consensus 12 ~h~~~----v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~--------~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 12 LYKEK----IWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKK--------AIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CCSSC----EEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCS--------CEEEEEECTTSSEEEEEETT
T ss_pred cCCCc----eeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccC--------CEEEEEECCCCCEEEEEeCC
Confidence 89855 8999999999999999999999999986 567777 34 433 68889885 6789999999
Q ss_pred CCEEEEEeecC------C--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCC-CcEEecccccCCc
Q 046773 212 GDIHVAVIDDV------A--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQA-EEVFVGGDLTDHN 282 (453)
Q Consensus 212 ~tIkvWd~~~~------g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~t-g~~~~g~~l~~~~ 282 (453)
++|+|||++.. . ..++.+|...|. .|+|+|+|++ |+|||.|++|+|||++. ++..
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~----~v~~sp~g~~---las~s~D~~v~iwd~~~~~~~~--------- 143 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVK----GVAWSNDGYY---LATCSRDKSVWIWETDESGEEY--------- 143 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEE----EEEECTTSCE---EEEEETTSCEEEEECCTTCCCC---------
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEE----EEEECCCCCE---EEEEeCCCEEEEEeccCCCCCe---------
Confidence 99999998531 1 234556766554 4899999996 89999999999999954 3211
Q ss_pred ceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCC--ceEEEEeeccCCeEEEEEEec--CCEEEEEeCCC
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQ--GMVLGERGYGRGLYVTSVDVN--AEAYIVVENRE 356 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~--~~~~~~~g~~~~~~v~~~~~~--g~~l~s~s~dg 356 (453)
....++.+|...|.+|+|+|++ +++++.|++|||||+.++ +++..+.+|...+...+|+++ +..+++++.|+
T Consensus 144 --~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 144 --ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp --EEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred --EEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 0114577899999999999876 455567899999999876 466666777766655556666 45789999999
Q ss_pred ccccCcceEEEEEcCCC--------eeEEEEEe-cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCe--EEEE-eccc
Q 046773 357 LENQNRRLAIVRRVDTF--------EEVCRFSL-RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGE--YMYS-FRER 423 (453)
Q Consensus 357 ~~~~~~~~i~Iw~~~tg--------~~v~~l~~-~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~--~l~t-L~gh 423 (453)
+|+||++.++ .++..+.. |...|..+.+++ ++++++++. ++|+|||+.+++ ++.. +.+|
T Consensus 222 -------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 222 -------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp -------CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred -------eEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-CCEEEEEeCCCEEEEEEcCCCceEEEecccccc
Confidence 9999998754 33444433 667788999884 457777776 999999999884 3433 4678
Q ss_pred CC-ceEE--EEec--CCCEEEEE-eCCcEEEEecC
Q 046773 424 IG-EEVI--AFVG--DDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 424 ~~-~~V~--a~s~--d~~~lasg-~D~~IklWDl~ 452 (453)
.. . |+ +|+| |+++|||+ .|++|+|||+.
T Consensus 294 ~~~~-v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 294 GVYE-INVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp TTSC-EEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred ccce-EEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 77 5 77 5667 78899999 99999999985
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.5e-37 Score=298.53 Aligned_cols=275 Identities=12% Similarity=0.160 Sum_probs=225.3
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCC
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDG 212 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~ 212 (453)
.||..+ |++++|++ ++||+|+.|++|+|||+.++++++++.+|.. .|.+++|+ ++.|++|+.|+
T Consensus 20 ~gh~~~----v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 20 AGHTKA----VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--------GISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp CCCSSC----EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEEEEEECTTSSEEEEEETTS
T ss_pred cccCCc----EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCC--------ceEEEEEcCCCCEEEEECCCC
Confidence 489855 88999986 6999999999999999999999999998764 57888875 67899999999
Q ss_pred CEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeee
Q 046773 213 DIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 213 tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~ 291 (453)
+|+|||+++.. +..+.+|...+. .++|+|++++ |++|+.|++|+|||+++++.. ..+.
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~--------------~~~~ 146 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVF----CCNFNPQSNL---IVSGSFDESVRIWDVKTGKCL--------------KTLP 146 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEE----EEEECSSSSE---EEEEETTSCEEEEETTTCCEE--------------EEEC
T ss_pred EEEEEECCCCcEEEEEcCCCCCEE----EEEEcCCCCE---EEEEeCCCcEEEEECCCCEEE--------------EEec
Confidence 99999998722 455666765543 4899999986 889999999999999998743 3466
Q ss_pred eeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEE
Q 046773 292 EFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVR 368 (453)
Q Consensus 292 ~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw 368 (453)
.|..+|.+++|+|++ +++++.|++|++||+++++++... ..+.......+|+++++.+++++.|+ .++||
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------~i~iw 219 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-------TLKLW 219 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT-------EEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC-------eEEEE
Confidence 788899999999876 455567899999999998877664 33444455567888899999999999 99999
Q ss_pred EcCCCeeEEEEEecCCCee--EEEEe-eCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-
Q 046773 369 RVDTFEEVCRFSLRADRNV--NVMGC-MNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS- 441 (453)
Q Consensus 369 ~~~tg~~v~~l~~~~~~v~--~~~~~-~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg- 441 (453)
|+.+++++..+..+..... ...++ +++.++++++. ++|+|||+.+++++.++.+|.+. |. +++|+++.|+++
T Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 220 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV-VISTACHPTENIIASAA 298 (312)
T ss_dssp ETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSC-EEEEEECSSSSEEEEEE
T ss_pred ECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCc-EEEEeecCcCCceEEEE
Confidence 9999999988877764432 22334 45566666666 99999999999999999999998 77 678999999987
Q ss_pred --eCCcEEEEecC
Q 046773 442 --CGTNIHLWDFG 452 (453)
Q Consensus 442 --~D~~IklWDl~ 452 (453)
.|++|+||+..
T Consensus 299 ~~~d~~i~~W~~d 311 (312)
T 4ery_A 299 LENDKTIKLWKSD 311 (312)
T ss_dssp CTTTCCEEEEECC
T ss_pred ccCCccEEEecCC
Confidence 49999999975
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.7e-37 Score=334.19 Aligned_cols=287 Identities=12% Similarity=0.097 Sum_probs=224.4
Q ss_pred CCCCCCCCeEEEEEEecCC---EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCC
Q 046773 137 SDVDNPDGLTCRCLTLSDL---YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLD 211 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~~---~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D 211 (453)
.||..+ |++++|+++ +|||||.|++|||||+.+++++++|.+|.. .|.+++|+ ++.|+|||.|
T Consensus 144 ~gh~~~----v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~--------~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 144 TGQARA----MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK--------FVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp CCCSSC----EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS--------CEEEEEECTTSSEEEEEETT
T ss_pred cCCCCC----ceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC--------ceEEEEECCCCCEEEEEECC
Confidence 489854 899999973 699999999999999999999999998764 68888885 6789999999
Q ss_pred CCEEEEEeecCC--cceEE-------eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEE---eccc-c
Q 046773 212 GDIHVAVIDDVA--NETRT-------AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVF---VGGD-L 278 (453)
Q Consensus 212 ~tIkvWd~~~~g--~~~~~-------~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~---~g~~-l 278 (453)
++|+|||+.+ + +.++. +|.+.|. .|+|+|||++ |+|||.|++|||||++++++. ..+. .
T Consensus 212 ~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~----~v~~spdg~~---l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 212 GTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVF----GLTWSPDGTK---IASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp SCEEEEETTT-CCEEEECBCTTSSSCSSSSCEE----EEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred CcEEEEECCC-CcEeeeeccccccccccCCCEE----EEEECCCCCE---EEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 9999999876 4 23332 4655553 4899999996 889999999999999998732 1110 0
Q ss_pred -----------------cCCcceeee--------eeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEE-
Q 046773 279 -----------------TDHNTVMGW--------RMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGE- 330 (453)
Q Consensus 279 -----------------~~~~~v~~w--------~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~- 330 (453)
..+..+..| ..+.+|...|.+++|+|++ +++++.|++|++||+.++.+....
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~ 363 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 363 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSS
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecc
Confidence 001112222 3567999999999999876 455677899999999987653321
Q ss_pred eec-----------------------------------------------------------------------------
Q 046773 331 RGY----------------------------------------------------------------------------- 333 (453)
Q Consensus 331 ~g~----------------------------------------------------------------------------- 333 (453)
.+|
T Consensus 364 ~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~ 443 (611)
T 1nr0_A 364 DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 443 (611)
T ss_dssp CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEE
T ss_pred cCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCcee
Confidence 111
Q ss_pred ----cCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCee--EEEEEecCCCeeEEEEeeCCCeEEEEeC-CeE
Q 046773 334 ----GRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEE--VCRFSLRADRNVNVMGCMNQGYALMCVE-GVI 406 (453)
Q Consensus 334 ----~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~--v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tI 406 (453)
.......+|+|++..+++++.|+ +|+||++++++. +.. ..|+..|..+.|+|++.++++++. ++|
T Consensus 444 ~~~~~~~v~~va~spdg~~lasgs~D~-------~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v 515 (611)
T 1nr0_A 444 EVPISYNSSCVALSNDKQFVAVGGQDS-------KVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKV 515 (611)
T ss_dssp EEECSSCEEEEEECTTSCEEEEEETTS-------EEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecCCCceEEEEeCCCCEEEEeCCCC-------eEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCE
Confidence 11123456778889999999999 999999988653 333 568888999999999999998887 999
Q ss_pred EEEECCC-CeEEEE--ecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 407 RVWEVEG-GEYMYS--FRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 407 rlWD~~t-G~~l~t--L~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+|||+.+ ++++.+ +.+|.+. |+ +|+||+++|||+ .|++|+|||+.
T Consensus 516 ~~w~~~~~~~~~~~~~~~~H~~~-V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 516 IPYSVANNFELAHTNSWTFHTAK-VACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp EEEEGGGTTEESCCCCCCCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCceeeeeeeeecccc-eeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 9999998 777765 3459888 88 788999999999 99999999974
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.6e-38 Score=316.87 Aligned_cols=274 Identities=10% Similarity=0.102 Sum_probs=210.3
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeC------CCcEEEEECCCCeEEEEe----cCCCCCccccccceEEEEEEcC-C
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFA------DGAVRLFDLTTRLHVRTF----RPQHSDRLGQFSRAVSGIIITD-S 203 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~------D~TIrlWD~~tg~~~~tl----~gh~~~~~~~~s~~V~~i~f~g-~ 203 (453)
.+|+.. |+|++||+ ++|||||. |++|++|+..+++...++ .+|.. .|.+++|++ .
T Consensus 39 ~~H~~~----V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~--------~V~~~~~s~d~ 106 (357)
T 4g56_B 39 ACMEVQ----IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA--------GVTDVAWVSEK 106 (357)
T ss_dssp -CCCSE----EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS--------CEEEEEEETTT
T ss_pred ccccCC----EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC--------CEEEEEEcCCC
Confidence 378733 89999986 69999997 788999999998764443 23332 588899874 4
Q ss_pred eEEEEeCCCCEEEEEeecCC-c--c--eEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccc
Q 046773 204 QLIFATLDGDIHVAVIDDVA-N--E--TRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDL 278 (453)
Q Consensus 204 ~LasgS~D~tIkvWd~~~~g-~--~--~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l 278 (453)
.+++++.|++|+|||+.+.. . . ...+|.+.|. .|+|+|||++ |++|+.|++|+|||+++++.+
T Consensus 107 ~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~----~v~~spdg~~---l~sgs~dg~v~iwd~~~~~~~----- 174 (357)
T 4g56_B 107 GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVK----TLSVFSDGTQ---AVSGGKDFSVKVWDLSQKAVL----- 174 (357)
T ss_dssp EEEEEETTSCEEEC--------CCCCEEECCCSSCEE----EEEECSSSSE---EEEEETTSCEEEEETTTTEEE-----
T ss_pred CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEE----EEEECCCCCE---EEEEeCCCeEEEEECCCCcEE-----
Confidence 68889999999999997721 1 1 1224555543 4899999996 889999999999999998853
Q ss_pred cCCcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEE--EecC-CEEEEE
Q 046773 279 TDHNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSV--DVNA-EAYIVV 352 (453)
Q Consensus 279 ~~~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~--~~~g-~~l~s~ 352 (453)
..+.+|...|.+|+|++++ +++++.|++|+|||+++++++.....+.+...+.++ +|++ ..++++
T Consensus 175 ---------~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 175 ---------KSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp ---------EEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred ---------EEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 3467889999999998754 345567899999999998765544333334445554 4543 467888
Q ss_pred eCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCC-eEEEEeC-CeEEEEECCCCeEEEEecccCCceEE-
Q 046773 353 ENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQG-YALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI- 429 (453)
Q Consensus 353 s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~-~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~- 429 (453)
+.|+ +|+|||+.+++++.++..+...|..+.++|++. ++++++. ++|||||++++++++.+ +|.+. |+
T Consensus 246 ~~d~-------~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~-V~~ 316 (357)
T 4g56_B 246 DETG-------NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDF-VTG 316 (357)
T ss_dssp ESSS-------CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSC-EEE
T ss_pred eccc-------ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCC-EEE
Confidence 9999 999999999999999999988899999999875 5666776 99999999999998876 79998 88
Q ss_pred -EEec-CCCEEEEE-eCCcEEEEecC
Q 046773 430 -AFVG-DDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 430 -a~s~-d~~~lasg-~D~~IklWDl~ 452 (453)
+|+| |+++|+|+ .|++|+|||+.
T Consensus 317 vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 317 VAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 5677 88999999 99999999984
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=305.03 Aligned_cols=279 Identities=13% Similarity=0.172 Sum_probs=217.7
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEE--EEe-cCCCCCccccccceEEEEEEc--CCeEEEEe
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHV--RTF-RPQHSDRLGQFSRAVSGIIIT--DSQLIFAT 209 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~--~tl-~gh~~~~~~~~s~~V~~i~f~--g~~LasgS 209 (453)
.||.+ .. |++++|++ ++|||||.|++|||||+++++.+ ..+ .+|.. .|.+++|+ ++.|++||
T Consensus 12 ~~h~~-~~--v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~--------~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 12 PAHPD-SR--CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR--------TVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp CCSTT-SC--EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSS--------CEEEEEECTTSSEEEEEE
T ss_pred cCCCC-Cc--EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCC--------cEEEEEECCCCCEEEEEE
Confidence 37873 13 78899986 69999999999999999998743 333 45543 68888885 67899999
Q ss_pred CCCCEEEEEeecCC---cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceee
Q 046773 210 LDGDIHVAVIDDVA---NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMG 286 (453)
Q Consensus 210 ~D~tIkvWd~~~~g---~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~ 286 (453)
.|++|+||+++... +.++.+|...|. .|+|+|+|++ |++||.|++|+|||++++.... .
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~h~~~v~----~v~~sp~~~~---l~s~s~D~~v~iwd~~~~~~~~-----------~ 142 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEGHENEVK----SVAWAPSGNL---LATCSRDKSVWVWEVDEEDEYE-----------C 142 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECCCSSCEE----EEEECTTSSE---EEEEETTSCEEEEEECTTSCEE-----------E
T ss_pred CCCcEEEEEccCCCeEEEEEccCCCCCce----EEEEeCCCCE---EEEEECCCeEEEEECCCCCCeE-----------E
Confidence 99999999987622 345566766654 5899999996 8899999999999998865211 1
Q ss_pred eeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCc--eEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCc
Q 046773 287 WRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQG--MVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNR 362 (453)
Q Consensus 287 w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~--~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~ 362 (453)
...+.+|...|.+++|+|++ +++++.|++|+|||+++++ ++.++.+|...+...+|+|+++.+++++.|+
T Consensus 143 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~------ 216 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR------ 216 (345)
T ss_dssp EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS------
T ss_pred EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC------
Confidence 24567899999999999876 4566778999999999875 3344567777666677788899999999999
Q ss_pred ceEEEEEcCCC---------------eeEEEEEe-cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCe---------E
Q 046773 363 RLAIVRRVDTF---------------EEVCRFSL-RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGE---------Y 416 (453)
Q Consensus 363 ~~i~Iw~~~tg---------------~~v~~l~~-~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~---------~ 416 (453)
+|+||+...+ +++.++.. |...+..+.+++++..+++++. ++|+|||..++. .
T Consensus 217 -~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 217 -TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp -CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred -eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 9999986321 34455544 5667899999999999988887 999999998653 1
Q ss_pred EEEecccCCceEE--EEecCC-CEEEEE-eCCcEEEEecC
Q 046773 417 MYSFRERIGEEVI--AFVGDD-RHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 417 l~tL~gh~~~~V~--a~s~d~-~~lasg-~D~~IklWDl~ 452 (453)
.+.+.+|.+. |+ +|+|++ .+|||+ .|++|+||++.
T Consensus 296 ~~~~~~h~~~-V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 296 AHLHQAHSQD-VNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp EEETTSSSSC-EEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred eeecccccCc-EeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 2345689888 88 677887 489999 99999999975
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-36 Score=308.78 Aligned_cols=279 Identities=15% Similarity=0.204 Sum_probs=219.5
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCcccc----------ccceEEEEEEc--CC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQ----------FSRAVSGIIIT--DS 203 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~----------~s~~V~~i~f~--g~ 203 (453)
+|..+ |+|++|++ ++||+|+ |++|+|||+.+|+++.++.+|......+ ....|.+++|+ ++
T Consensus 62 ~h~~~----V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 62 DHTSV----VCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp ECSSC----CCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred CCCCE----EEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 58744 78999986 6999987 7899999999999999998654210000 01137788885 67
Q ss_pred eEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCC
Q 046773 204 QLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDH 281 (453)
Q Consensus 204 ~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~ 281 (453)
.|++|+.|++|+|||+++ + ...+.+|...|. .++|+|+|++ |++||.|++|+|||++++++..
T Consensus 137 ~l~s~~~d~~i~iwd~~~-~~~~~~~~~h~~~v~----~~~~~p~~~~---l~s~s~d~~v~iwd~~~~~~~~------- 201 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIEN-RKIVMILQGHEQDIY----SLDYFPSGDK---LVSGSGDRTVRIWDLRTGQCSL------- 201 (393)
T ss_dssp EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEE----EEEECTTSSE---EEEEETTSEEEEEETTTTEEEE-------
T ss_pred EEEEEcCCCeEEEEECCC-CcEEEEEccCCCCEE----EEEEcCCCCE---EEEecCCCcEEEEECCCCeeEE-------
Confidence 899999999999999987 4 455666766654 5899999986 8899999999999999988431
Q ss_pred cceeeeeeeeeeccceeEEEEcC-Cc--eEEEEcCCcEEEEECCCCceEEEE-------eeccCCeEEEEEEecCCEEEE
Q 046773 282 NTVMGWRMLTEFTEFVGRVRVTS-HE--SAVACTSSRVITFDLRNQGMVLGE-------RGYGRGLYVTSVDVNAEAYIV 351 (453)
Q Consensus 282 ~~v~~w~~l~~h~~~v~~v~~s~-~~--~~vas~d~tIrlWDl~t~~~~~~~-------~g~~~~~~v~~~~~~g~~l~s 351 (453)
++ .+...+.+++++| ++ +++++.|++|++||++++.++..+ .+|...+...+|+++++.+++
T Consensus 202 -------~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 202 -------TL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp -------EE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred -------EE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 11 2346788899987 44 455577899999999998776554 356555666667788889999
Q ss_pred EeCCCccccCcceEEEEEcCC------------CeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEE
Q 046773 352 VENRELENQNRRLAIVRRVDT------------FEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMY 418 (453)
Q Consensus 352 ~s~dg~~~~~~~~i~Iw~~~t------------g~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~ 418 (453)
++.|+ +|+|||+.+ +.+...+..|.+.+..+.+++++.++++++. ++|+|||+++++++.
T Consensus 274 ~s~d~-------~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 274 GSLDR-------SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp EETTS-------EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred EeCCC-------EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 99999 999999875 3455677788888999999999999998887 999999999999999
Q ss_pred EecccCCceEEEE--e------cCCCEEEEE-eCCcEEEEecC
Q 046773 419 SFRERIGEEVIAF--V------GDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 419 tL~gh~~~~V~a~--s------~d~~~lasg-~D~~IklWDl~ 452 (453)
+|.+|.+. |.++ + |++++|||| .|++|+|||+.
T Consensus 347 ~l~~h~~~-v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 347 MLQGHRNS-VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEECCSSC-EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EECCCCCC-EEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 99999998 8744 3 478899999 99999999974
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9e-36 Score=291.55 Aligned_cols=275 Identities=13% Similarity=0.187 Sum_probs=217.4
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCe-----EEEEecCCCCCccccccceEEEEEEc--CCeEE
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRL-----HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLI 206 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~-----~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~La 206 (453)
+||.++ |+||+|+| ++|||||.|++|||||+.+++ +.++|++|.. .|.+++|+ ++.|+
T Consensus 35 ~GH~~~----V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~--------~V~~~~~s~dg~~l~ 102 (340)
T 4aow_A 35 KGHNGW----VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH--------FVSDVVISSDGQFAL 102 (340)
T ss_dssp CCCSSC----EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS--------CEEEEEECTTSSEEE
T ss_pred CCccCC----EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC--------CEEEEEECCCCCEEE
Confidence 399855 89999985 589999999999999987754 6788988754 68888885 67899
Q ss_pred EEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCccee
Q 046773 207 FATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVM 285 (453)
Q Consensus 207 sgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~ 285 (453)
+|+.|++|++|+..... ......+...+ ..+.++++++. |++|+.|+.+++||+.......
T Consensus 103 s~~~d~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---l~s~s~d~~~~~~d~~~~~~~~----------- 164 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDV----LSVAFSSDNRQ---IVSGSRDKTIKLWNTLGVCKYT----------- 164 (340)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCE----EEEEECTTSSC---EEEEETTSCEEEECTTSCEEEE-----------
T ss_pred EEcccccceEEeecccceeeeecCCCCce----eEEEEeecCcc---ceeecCCCeEEEEEeCCCceEE-----------
Confidence 99999999999987621 11222222211 24678999886 8899999999999998766321
Q ss_pred eeeeeeeeccceeEEEEcCCc----eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccC
Q 046773 286 GWRMLTEFTEFVGRVRVTSHE----SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQN 361 (453)
Q Consensus 286 ~w~~l~~h~~~v~~v~~s~~~----~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~ 361 (453)
..+.+|...+..++|+++. .++++.|++|++||+++++++..+.+|...+...+|+|+++.+++++.|+
T Consensus 165 --~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg----- 237 (340)
T 4aow_A 165 --VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG----- 237 (340)
T ss_dssp --ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC-----
T ss_pred --EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC-----
Confidence 2345788899999998653 24456789999999999887777777777666667788889999999999
Q ss_pred cceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEec---------ccCCceEE--E
Q 046773 362 RRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFR---------ERIGEEVI--A 430 (453)
Q Consensus 362 ~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~---------gh~~~~V~--a 430 (453)
+|+|||+.+.+++..+..+ +.+..+.+++++..++++.+++|+|||++++.++..+. +|... |+ +
T Consensus 238 --~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~ 313 (340)
T 4aow_A 238 --QAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ-CTSLA 313 (340)
T ss_dssp --EEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCC-EEEEE
T ss_pred --eEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC-EEEEE
Confidence 9999999999998888654 45788888877655444445999999999998887765 56677 77 6
Q ss_pred EecCCCEEEEE-eCCcEEEEecC
Q 046773 431 FVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 431 ~s~d~~~lasg-~D~~IklWDl~ 452 (453)
|+||+++|++| .|++|+|||+.
T Consensus 314 ~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 314 WSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCC
Confidence 78999999999 99999999974
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.8e-36 Score=328.63 Aligned_cols=276 Identities=12% Similarity=0.174 Sum_probs=224.4
Q ss_pred CCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCC-----CeEEEEecCCCCCccccccceEEEEEEc--CCeEEE
Q 046773 138 DVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTT-----RLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIF 207 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~t-----g~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Las 207 (453)
||+++ |+|++|++ ++|||||.|++|||||+.+ +.+.++|.+|.. .|.+++|+ ++.|+|
T Consensus 380 ~H~~~----V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~--------~v~~v~~s~~g~~l~s 447 (694)
T 3dm0_A 380 AHTDM----VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH--------FVEDVVLSSDGQFALS 447 (694)
T ss_dssp CCSSC----EEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS--------CEEEEEECTTSSEEEE
T ss_pred cCCce----eEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCC--------cEEEEEECCCCCEEEE
Confidence 89854 89999974 5899999999999999976 456788988764 57888875 678999
Q ss_pred EeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCccee
Q 046773 208 ATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVM 285 (453)
Q Consensus 208 gS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~ 285 (453)
||.|++|+|||+.+ + ...+.+|...|. .|+|+|++++ |+|||.|++|+|||+.....+.-
T Consensus 448 gs~Dg~v~vwd~~~-~~~~~~~~~h~~~v~----~~~~s~~~~~---l~s~s~D~~i~iwd~~~~~~~~~---------- 509 (694)
T 3dm0_A 448 GSWDGELRLWDLAA-GVSTRRFVGHTKDVL----SVAFSLDNRQ---IVSASRDRTIKLWNTLGECKYTI---------- 509 (694)
T ss_dssp EETTSEEEEEETTT-TEEEEEEECCSSCEE----EEEECTTSSC---EEEEETTSCEEEECTTSCEEEEE----------
T ss_pred EeCCCcEEEEECCC-CcceeEEeCCCCCEE----EEEEeCCCCE---EEEEeCCCEEEEEECCCCcceee----------
Confidence 99999999999987 5 455667877664 5899999997 88999999999999876653210
Q ss_pred eeeeeeeeccceeEEEEcCCc----eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccC
Q 046773 286 GWRMLTEFTEFVGRVRVTSHE----SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQN 361 (453)
Q Consensus 286 ~w~~l~~h~~~v~~v~~s~~~----~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~ 361 (453)
.....+|..+|.+++|+|++ +++++.|++|+|||++++++...+.+|...+...+++++++.+++++.|+
T Consensus 510 -~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg----- 583 (694)
T 3dm0_A 510 -SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG----- 583 (694)
T ss_dssp -CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred -ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-----
Confidence 01124788999999999865 56667889999999999888777778877777777888899999999999
Q ss_pred cceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecccCCc---------------
Q 046773 362 RRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERIGE--------------- 426 (453)
Q Consensus 362 ~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~gh~~~--------------- 426 (453)
+|+|||+.+++++..+..+ ..+..+.+++++..+++++++.|+|||+++++++..+..+...
T Consensus 584 --~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (694)
T 3dm0_A 584 --VVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR 660 (694)
T ss_dssp --BCEEEETTTTEEEECCBCS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------
T ss_pred --eEEEEECCCCceEEEecCC-CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCc
Confidence 9999999999888776543 4588899999887777666688999999999999888643211
Q ss_pred ---eEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 427 ---EVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 427 ---~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+. +|+||+++|+|| .|++|+|||++
T Consensus 661 ~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 661 KVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 133 678999999999 99999999985
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.2e-36 Score=322.65 Aligned_cols=272 Identities=14% Similarity=0.148 Sum_probs=220.5
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCe--EEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRL--HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLD 211 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~--~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D 211 (453)
||.++ |+|++|+| ++||||+.|++|||||+.+++ +..++.+|.. .|.+++|+ ++.|++++.|
T Consensus 57 ~h~~~----v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~--------~v~~v~fs~dg~~l~~~~~~ 124 (611)
T 1nr0_A 57 EHSHQ----TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSG--------PVKDISWDSESKRIAAVGEG 124 (611)
T ss_dssp CCSSC----EEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSS--------CEEEEEECTTSCEEEEEECC
T ss_pred CCCCc----eEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCC--------ceEEEEECCCCCEEEEEECC
Confidence 89854 88999986 699999999999999998654 4567877654 68888886 6789988876
Q ss_pred C----CEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeee
Q 046773 212 G----DIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGW 287 (453)
Q Consensus 212 ~----tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w 287 (453)
. +|++||... ...++.+|...|. .|+|+|+++. .|+|||.|++|+|||.+++++.
T Consensus 125 ~~~~~~v~~wd~~~-~~~~l~gh~~~v~----~v~f~p~~~~--~l~s~s~D~~v~lwd~~~~~~~-------------- 183 (611)
T 1nr0_A 125 RERFGHVFLFDTGT-SNGNLTGQARAMN----SVDFKPSRPF--RIISGSDDNTVAIFEGPPFKFK-------------- 183 (611)
T ss_dssp SSCSEEEEETTTCC-BCBCCCCCSSCEE----EEEECSSSSC--EEEEEETTSCEEEEETTTBEEE--------------
T ss_pred CCceeEEEEeeCCC-CcceecCCCCCce----EEEECCCCCe--EEEEEeCCCeEEEEECCCCeEe--------------
Confidence 3 566776433 2566777877664 5999999874 3889999999999999887743
Q ss_pred eeeeeeccceeEEEEcCCce--EEEEcCCcEEEEECCCCceEEEEe-------eccCCeEEEEEEecCCEEEEEeCCCcc
Q 046773 288 RMLTEFTEFVGRVRVTSHES--AVACTSSRVITFDLRNQGMVLGER-------GYGRGLYVTSVDVNAEAYIVVENRELE 358 (453)
Q Consensus 288 ~~l~~h~~~v~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~~~~~-------g~~~~~~v~~~~~~g~~l~s~s~dg~~ 358 (453)
+++.+|.++|.+|+|+|++. ++++.|++|||||+.+++++..+. +|...+...+|+|+++.+++++.|+
T Consensus 184 ~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-- 261 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-- 261 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS--
T ss_pred eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC--
Confidence 45778999999999999874 556778999999999998876652 6776666667788899999999999
Q ss_pred ccCcceEEEEEcCCCeeEEEEEecC---CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEe
Q 046773 359 NQNRRLAIVRRVDTFEEVCRFSLRA---DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFV 432 (453)
Q Consensus 359 ~~~~~~i~Iw~~~tg~~v~~l~~~~---~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s 432 (453)
+|+|||+.+++++.++..+. .....+.+ ++..+++++. ++|++||+++++++.++.||.+. |+ +|+
T Consensus 262 -----~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~-v~~l~~s 333 (611)
T 1nr0_A 262 -----TIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKA-ITALSSS 333 (611)
T ss_dssp -----EEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC-EEEEEEC
T ss_pred -----eEEEEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC-EEEEEEe
Confidence 99999999999988886542 11223333 6777887777 99999999999999999999998 88 678
Q ss_pred cCCCEEEEE-eCCcEEEEecC
Q 046773 433 GDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 433 ~d~~~lasg-~D~~IklWDl~ 452 (453)
||+++|+++ .|++|+|||+.
T Consensus 334 pdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 334 ADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp TTSSEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEeCCCcEEEEECC
Confidence 999999999 99999999974
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.6e-35 Score=310.72 Aligned_cols=267 Identities=14% Similarity=0.214 Sum_probs=223.9
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
||..+ |++++|++ ++|++++.|++||+||+.+ +++.++.+|.. .|.+++|+ ++.|++|+.|++
T Consensus 301 ~h~~~----v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~--------~v~~~~~s~~g~~l~~~~~dg~ 367 (577)
T 2ymu_A 301 GHSSS----VWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSS--------SVWGVAFSPDGQTIASASDDKT 367 (577)
T ss_dssp CCSSC----EEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSS--------CEEEEEECTTSSEEEEEETTSE
T ss_pred cCCCC----eEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCC--------CEEEEEECCCCCEEEEEeCCCE
Confidence 78744 78999986 6999999999999999865 55678887654 57778875 678999999999
Q ss_pred EEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 214 IHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 214 IkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
|++||.+..-+.++..|...+. .++|+|||++ |++|+.|++|+|||. +++.+ +++.+|
T Consensus 368 v~~~~~~~~~~~~~~~~~~~v~----~~~~s~dg~~---l~~~~~d~~v~~~~~-~~~~~--------------~~~~~~ 425 (577)
T 2ymu_A 368 VKLWNRNGQLLQTLTGHSSSVR----GVAFSPDGQT---IASASDDKTVKLWNR-NGQLL--------------QTLTGH 425 (577)
T ss_dssp EEEEETTCCEEEEEECCSSCEE----EEEECTTSSC---EEEEETTSEEEEECT-TCCEE--------------EEEECC
T ss_pred EEEEcCCCCEEEEecCCCCCeE----EEEECCCCCE---EEEEeCCCEEEEEeC-CCCEE--------------EEecCC
Confidence 9999965411455666765543 4899999997 889999999999996 44432 356788
Q ss_pred ccceeEEEEcCCce--EEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC
Q 046773 294 TEFVGRVRVTSHES--AVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD 371 (453)
Q Consensus 294 ~~~v~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~ 371 (453)
...|.+++|+|++. ++++.|++|++||+. ++++..+.+|...+...+|+|+++.+++++.|+ +|+||+.
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~-------~i~iw~~- 496 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK-------TVKLWNR- 496 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTS-------EEEEEET-
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-------EEEEEcC-
Confidence 99999999998764 455678999999975 466666777877776677888899999999999 9999995
Q ss_pred CCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEE
Q 046773 372 TFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIH 447 (453)
Q Consensus 372 tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~Ik 447 (453)
+++++.++..|...|..+.++|+++++++++. ++|+|||. +|+++.+|.+|.+. |+ +|+||+++|+|+ .|++|+
T Consensus 497 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~-v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 497 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS-VWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSC-EEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCC-EEEEEEcCCCCEEEEEeCCCEEE
Confidence 67889999999999999999999999998887 99999995 79999999999999 88 678999999999 999999
Q ss_pred EEe
Q 046773 448 LWD 450 (453)
Q Consensus 448 lWD 450 (453)
|||
T Consensus 575 ~Wd 577 (577)
T 2ymu_A 575 LWN 577 (577)
T ss_dssp EEC
T ss_pred EeC
Confidence 998
No 23
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-34 Score=294.87 Aligned_cols=270 Identities=12% Similarity=0.206 Sum_probs=227.6
Q ss_pred CCCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEE
Q 046773 137 SDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHV 216 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkv 216 (453)
.+|..+ |.|++|++++|++|+.|++|+|||++++++++++.+|.. .|.+++|++..|++|+.|++|++
T Consensus 156 ~~h~~~----v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~--------~v~~~~~~~~~l~s~s~dg~i~~ 223 (445)
T 2ovr_B 156 VGHTGG----VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS--------TVRCMHLHEKRVVSGSRDATLRV 223 (445)
T ss_dssp CCCSSC----EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEEEEEEETTEEEEEETTSEEEE
T ss_pred cCCCCC----EEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCC--------cEEEEEecCCEEEEEeCCCEEEE
Confidence 478844 899999999999999999999999999999999998754 68889999999999999999999
Q ss_pred EEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc
Q 046773 217 AVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE 295 (453)
Q Consensus 217 Wd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~ 295 (453)
||+.+.. ...+.+|...+. .++| +|+. |++|+.|++|+|||+++++.+ .++.+|..
T Consensus 224 wd~~~~~~~~~~~~~~~~v~----~~~~--~~~~---l~~~~~dg~i~iwd~~~~~~~--------------~~~~~~~~ 280 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVR----CVQY--DGRR---VVSGAYDFMVKVWDPETETCL--------------HTLQGHTN 280 (445)
T ss_dssp EESSSCCEEEEEECCSSCEE----EEEE--CSSC---EEEEETTSCEEEEEGGGTEEE--------------EEECCCSS
T ss_pred EECCCCcEEEEEcCCcccEE----EEEE--CCCE---EEEEcCCCEEEEEECCCCcEe--------------EEecCCCC
Confidence 9998722 455556655543 3666 6665 889999999999999998753 34667889
Q ss_pred ceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCee
Q 046773 296 FVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEE 375 (453)
Q Consensus 296 ~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~ 375 (453)
.|.++.+++..+++++.|++|++||+++++++....+|. ..+.++.++++.+++++.|+ +++|||+.++++
T Consensus 281 ~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~ 351 (445)
T 2ovr_B 281 RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ--SLTSGMELKDNILVSGNADS-------TVKIWDIKTGQC 351 (445)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCC--SCEEEEEEETTEEEEEETTS-------CEEEEETTTCCE
T ss_pred ceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCc--ccEEEEEEeCCEEEEEeCCC-------eEEEEECCCCcE
Confidence 999999988777888889999999999998877766554 45678889999999999999 999999999999
Q ss_pred EEEEEe---cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe-----cccCCceEE--EEecCCCEEEEE-eC
Q 046773 376 VCRFSL---RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF-----RERIGEEVI--AFVGDDRHVAAS-CG 443 (453)
Q Consensus 376 v~~l~~---~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL-----~gh~~~~V~--a~s~d~~~lasg-~D 443 (453)
+..+.. +...+..+.+ ++.++++++. ++|+|||+.+|+++.++ .+|.+. |+ +|+|++..|+++ .|
T Consensus 352 ~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~la~~~~d 428 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV-VWRIRASNTKLVCAVGSRN 428 (445)
T ss_dssp EEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCE-EEEEEECSSEEEEEEECSS
T ss_pred EEEEccCCCCCCCEEEEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCce-EEEEEecCCEEEEEEcccC
Confidence 998876 5555777766 4678888887 99999999999999988 466666 87 677999999999 99
Q ss_pred Cc----EEEEecCC
Q 046773 444 TN----IHLWDFGA 453 (453)
Q Consensus 444 ~~----IklWDl~~ 453 (453)
++ |.||||+.
T Consensus 429 g~~~~~l~v~df~~ 442 (445)
T 2ovr_B 429 GTEETKLLVLDFDV 442 (445)
T ss_dssp SSSCCEEEEEECCC
T ss_pred CCCccEEEEEECCC
Confidence 98 99999973
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7e-36 Score=307.58 Aligned_cols=275 Identities=13% Similarity=0.116 Sum_probs=205.2
Q ss_pred CCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCeEE--EEecCCCCCccccccceEEEEEEc---CCeEEEEe
Q 046773 138 DVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRLHV--RTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFAT 209 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~--~tl~gh~~~~~~~~s~~V~~i~f~---g~~LasgS 209 (453)
+|... |+||+|+| ++||||+.|++|+|||+.+++.. .++.+|.. .|.+|+|+ +.+|+|||
T Consensus 117 ~~~~~----V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~--------~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 117 PFDRR----ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGG--------SITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp ECSSC----EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSC--------CCCEEEECSSCTTEEEEEC
T ss_pred CCCCC----EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCC--------CEEEEEEeCCCCCEEEEEe
Confidence 57633 89999986 58999999999999999988754 44556654 68889985 56899999
Q ss_pred CCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeee
Q 046773 210 LDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWR 288 (453)
Q Consensus 210 ~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~ 288 (453)
.|++|+|||+++ + ...+..+... ......++|+|++++ |++|+.|++|+|||+++.+. .
T Consensus 185 ~D~~v~iwd~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~---l~~g~~dg~i~~wd~~~~~~---------------~ 244 (435)
T 4e54_B 185 MEGTTRLQDFKG-NILRVFASSDTI-NIWFCSLDVSASSRM---VVTGDNVGNVILLNMDGKEL---------------W 244 (435)
T ss_dssp SSSCEEEEETTS-CEEEEEECCSSC-SCCCCCEEEETTTTE---EEEECSSSBEEEEESSSCBC---------------C
T ss_pred CCCEEEEeeccC-CceeEEeccCCC-CccEEEEEECCCCCE---EEEEeCCCcEeeeccCccee---------------E
Confidence 999999999986 3 2233222111 011124899999996 88999999999999976542 3
Q ss_pred eeeeeccceeEEEEcCCc--e-EEEEcCCcEEEEECCCCceEEEE---eeccCCeEEEEEEecCCEEEEEeCCCccccCc
Q 046773 289 MLTEFTEFVGRVRVTSHE--S-AVACTSSRVITFDLRNQGMVLGE---RGYGRGLYVTSVDVNAEAYIVVENRELENQNR 362 (453)
Q Consensus 289 ~l~~h~~~v~~v~~s~~~--~-~vas~d~tIrlWDl~t~~~~~~~---~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~ 362 (453)
++.+|..+|.+|+|+|++ + ++++.|++|+|||+++.++.... .+|...+...+|++++..+++++.|+
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~------ 318 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS------ 318 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS------
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC------
Confidence 467889999999999764 3 34567899999999987543322 45555554455677889999999999
Q ss_pred ceEEEEEcCCCeeEEEEEecCCC------eeEEEEeeCCCeEEEEe------------C-CeEEEEECCCCeEEEEec-c
Q 046773 363 RLAIVRRVDTFEEVCRFSLRADR------NVNVMGCMNQGYALMCV------------E-GVIRVWEVEGGEYMYSFR-E 422 (453)
Q Consensus 363 ~~i~Iw~~~tg~~v~~l~~~~~~------v~~~~~~~~~~~lls~s------------~-~tIrlWD~~tG~~l~tL~-g 422 (453)
+|+||++.++++...+..++.. .....+++++..++++. + ++|+|||+.+|+++.++. +
T Consensus 319 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~ 397 (435)
T 4e54_B 319 -EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP 397 (435)
T ss_dssp -CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS
T ss_pred -EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC
Confidence 9999999999887777655432 12234455554444432 2 689999999999999986 4
Q ss_pred cCCceEE---EEecCCCEEEEEeCCcEEEEecC
Q 046773 423 RIGEEVI---AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 423 h~~~~V~---a~s~d~~~lasg~D~~IklWDl~ 452 (453)
|... |. +|+||+++||+|.|++|+|||+.
T Consensus 398 ~~~~-v~s~~~fspdg~~lasg~d~~i~iW~~~ 429 (435)
T 4e54_B 398 ESSG-ISSLNEFNPMGDTLASAMGYHILIWSQQ 429 (435)
T ss_dssp SCCC-CCCEEEECTTSSCEEEECSSEEEECCCC
T ss_pred CCCc-EEEEEEECCCCCEEEEEcCCcEEEEECC
Confidence 5555 54 68999999999988899999975
No 25
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-34 Score=289.99 Aligned_cols=278 Identities=11% Similarity=0.038 Sum_probs=204.4
Q ss_pred EEEEEecC--CEEEEEeCCC-------cEEEEECCCCeEE----------EEecCCCCCccccccceEEEEEEcCCeEEE
Q 046773 147 CRCLTLSD--LYLACGFADG-------AVRLFDLTTRLHV----------RTFRPQHSDRLGQFSRAVSGIIITDSQLIF 207 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~-------TIrlWD~~tg~~~----------~tl~gh~~~~~~~~s~~V~~i~f~g~~Las 207 (453)
|+|++|++ ++||||+.|. +||||++..+... .+|.+|. ..|.+++++++.+++
T Consensus 17 V~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~--------~~v~s~~~~~~~~~~ 88 (365)
T 4h5i_A 17 AYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND--------DSPTAIDASKGIILV 88 (365)
T ss_dssp EEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS--------CCCCEEEEETTEEEE
T ss_pred EEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC--------CceEEEEeCCCEEEE
Confidence 89999976 5899998765 5999999876531 2344433 256778888887776
Q ss_pred E-----------eCCCCEEEEEeecCC--cceEEeeecce---ecC-ceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCC
Q 046773 208 A-----------TLDGDIHVAVIDDVA--NETRTAHFGSV---MDD-GVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAE 270 (453)
Q Consensus 208 g-----------S~D~tIkvWd~~~~g--~~~~~~~~~~v---~~~-~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg 270 (453)
| +.|+++|+|+++... ........... ..+ -..|+|||||+++ .+|||+.|++|||||++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l-a~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA-AIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE-EEEESCSSCEEEEEETTTT
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE-EEEECCCCCEEEEeECCCC
Confidence 5 467889999987622 11111111000 001 1258999999984 3567889999999999998
Q ss_pred cEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEE-EcCCcEEEEECCCCceEEEE--eeccCCeEEEEEEecCC
Q 046773 271 EVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVA-CTSSRVITFDLRNQGMVLGE--RGYGRGLYVTSVDVNAE 347 (453)
Q Consensus 271 ~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~va-s~d~tIrlWDl~t~~~~~~~--~g~~~~~~v~~~~~~g~ 347 (453)
+... ++ .|...|.+|+|+|++..++ ++++++++|+..+++++... .+|...+...+|+|++.
T Consensus 168 ~~~~--------------~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 168 TEKF--------------EI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp EEEE--------------EE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred cEEE--------------Ee-CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 8431 22 4667899999999886554 45678999999988876554 34443444456788888
Q ss_pred EEEEEeCCCccccCcceEEEEEcCCCee----EEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe-c
Q 046773 348 AYIVVENRELENQNRRLAIVRRVDTFEE----VCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF-R 421 (453)
Q Consensus 348 ~l~s~s~dg~~~~~~~~i~Iw~~~tg~~----v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL-~ 421 (453)
.+++++.++. ...++++|+...... ...+..|...|.++.++|+++++++++. ++|+|||++++++++++ .
T Consensus 233 ~l~~~s~d~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 233 VLIAASLKKG---KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp EEEEEEESSS---CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT
T ss_pred EEEEEecCCc---ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC
Confidence 9999987761 111466677665532 3445667777999999999999998887 99999999999999985 7
Q ss_pred ccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 422 ERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 422 gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+|.+. |+ +|+||+++|||+ .|++|||||+.
T Consensus 310 gH~~~-V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 310 AHSFA-ITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SSSSC-EEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred cccCC-EEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999 88 788999999999 99999999984
No 26
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.6e-34 Score=288.15 Aligned_cols=281 Identities=11% Similarity=0.076 Sum_probs=224.4
Q ss_pred CCCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCe------EEEEecCCCCCccccccceEEEEEEc------C--
Q 046773 137 SDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRL------HVRTFRPQHSDRLGQFSRAVSGIIIT------D-- 202 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~------~~~tl~gh~~~~~~~~s~~V~~i~f~------g-- 202 (453)
.||..+ |+|++|++++||+|+.|++|+|||+.+++ ++.++.+|.. .|.+++|+ +
T Consensus 13 ~~h~~~----i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 13 KAHDAD----IFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS--------GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp SCSSSC----EEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT--------CEEEEEEEEEEETTTEE
T ss_pred hhhhcC----eEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCC--------cEEEEEEecccccCCcc
Confidence 489855 89999999999999999999999999998 8889987654 57777764 6
Q ss_pred -CeEEEEeCCCCEEEEEeecCC------cceEEeee-----cceecCceEEEEe----CCCceeeEEEEeeCCCeEEEee
Q 046773 203 -SQLIFATLDGDIHVAVIDDVA------NETRTAHF-----GSVMDDGVLIDFT----GCSRYWVGLYAGLAGRAFHIWD 266 (453)
Q Consensus 203 -~~LasgS~D~tIkvWd~~~~g------~~~~~~~~-----~~v~~~~~~v~Fs----~dg~~~~~LaSgS~D~tIrvWD 266 (453)
+.|++++.|++|++||+.+.. +..+..|. ..+. .++|+ |+++. .|++|+.|++|+|||
T Consensus 81 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~~~~~--~l~~~~~dg~i~iwd 154 (397)
T 1sq9_A 81 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW----ALKWGASNDRLLSH--RLVATDVKGTTYIWK 154 (397)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE----EEEEECCC----CE--EEEEEETTSCEEEEE
T ss_pred ccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE----EEEEeeccCCCCce--EEEEEeCCCcEEEEe
Confidence 789999999999999998722 23344452 3332 48999 99884 278999999999999
Q ss_pred CCC------CcEEecccccCCcceeeeeee-------eeeccceeEEEEcCCceEE-EEcCCcEEEEECCCCceEEEEee
Q 046773 267 RQA------EEVFVGGDLTDHNTVMGWRML-------TEFTEFVGRVRVTSHESAV-ACTSSRVITFDLRNQGMVLGERG 332 (453)
Q Consensus 267 ~~t------g~~~~g~~l~~~~~v~~w~~l-------~~h~~~v~~v~~s~~~~~v-as~d~tIrlWDl~t~~~~~~~~g 332 (453)
+++ ++.+. ..+. ..+ ..|...|.+++|+|++.++ ++.|++|++||+++++++....+
T Consensus 155 ~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 155 FHPFADESNSLTLN----WSPT-----LELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp EESSSSHHHHTTTC----CCCE-----EEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CCccccccccceee----ccCc-----ceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEec
Confidence 988 54210 0000 133 3477889999999887333 34568999999999887766666
Q ss_pred ---c---cCCeEEEEEEecCCEEEEEeCC---CccccCcceEEEEEcCCCeeEEEEEe-------------cCCCeeEEE
Q 046773 333 ---Y---GRGLYVTSVDVNAEAYIVVENR---ELENQNRRLAIVRRVDTFEEVCRFSL-------------RADRNVNVM 390 (453)
Q Consensus 333 ---~---~~~~~v~~~~~~g~~l~s~s~d---g~~~~~~~~i~Iw~~~tg~~v~~l~~-------------~~~~v~~~~ 390 (453)
| ...+...+|+++++.+++++.| + .++|||+.+++++..+.. |...+..+.
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g-------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG-------CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEETTEE-------EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEE
T ss_pred cccccccCCccceEEECCCCCEEEEEecCCCCc-------eEEEEECCCCcccceeccCcccccccccccccCCcEEEEE
Confidence 6 6566666778889999999998 8 999999999999999988 888899999
Q ss_pred EeeCCCeEEEEeC-CeEEEEECCCCeEEEEec------cc---------------CCceEE--EEecCC----------C
Q 046773 391 GCMNQGYALMCVE-GVIRVWEVEGGEYMYSFR------ER---------------IGEEVI--AFVGDD----------R 436 (453)
Q Consensus 391 ~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~------gh---------------~~~~V~--a~s~d~----------~ 436 (453)
+++++.++++++. ++|+|||+.+++++.++. +| ... |+ +|+||+ +
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-v~~~~~~~~g~~~~~~~~~~~ 377 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG-VFDVKFLKKGWRSGMGADLNE 377 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC-EEEEEEECTTTSBSTTCTTSC
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc-eeEEEeccccccccccccccc
Confidence 9999999998887 999999999999999999 88 777 87 678998 7
Q ss_pred EEEEE-eCCcEEEEecC
Q 046773 437 HVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 437 ~lasg-~D~~IklWDl~ 452 (453)
+|+++ .|++|+|||+.
T Consensus 378 ~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 378 SLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEEETTTEEEEEEEE
T ss_pred eEEEecCCCcEEEEEcC
Confidence 99999 99999999974
No 27
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-34 Score=278.82 Aligned_cols=279 Identities=10% Similarity=0.090 Sum_probs=224.9
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
||..+ |+|++|++ ++||+|+.|++|+|||+.++++++++.+|.. .|.+++|+ ++.|++++.|++
T Consensus 30 ~h~~~----v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~s~~~dg~ 97 (369)
T 3zwl_B 30 GHERP----LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG--------TIWSIDVDCFTKYCVTGSADYS 97 (369)
T ss_dssp CCSSC----EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS--------CEEEEEECTTSSEEEEEETTTE
T ss_pred Eeece----EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC--------cEEEEEEcCCCCEEEEEeCCCe
Confidence 89855 89999986 6999999999999999999999999998764 57888886 678999999999
Q ss_pred EEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCC-----CeEEEeeCCCCc---EEecccccCCcc
Q 046773 214 IHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAG-----RAFHIWDRQAEE---VFVGGDLTDHNT 283 (453)
Q Consensus 214 IkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D-----~tIrvWD~~tg~---~~~g~~l~~~~~ 283 (453)
|++||+.+ + +..+. +...+ ..++|+|++++ |++++.| ++|++||++++. .+.... ..
T Consensus 98 i~iwd~~~-~~~~~~~~-~~~~v----~~~~~~~~~~~---l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~---~~- 164 (369)
T 3zwl_B 98 IKLWDVSN-GQCVATWK-SPVPV----KRVEFSPCGNY---FLAILDNVMKNPGSINIYEIERDSATHELTKVS---EE- 164 (369)
T ss_dssp EEEEETTT-CCEEEEEE-CSSCE----EEEEECTTSSE---EEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC---SS-
T ss_pred EEEEECCC-CcEEEEee-cCCCe----EEEEEccCCCE---EEEecCCccCCCCEEEEEEecCCccceeecccc---cc-
Confidence 99999987 4 22222 33332 24899999996 7788888 999999998765 111000 00
Q ss_pred eeeeeeeeeecc--ceeEEEEcCCc--eEEEEcCCcEEEEECCC-CceEEEEeeccCCeEEEEEEecCCEEEEEeCCCcc
Q 046773 284 VMGWRMLTEFTE--FVGRVRVTSHE--SAVACTSSRVITFDLRN-QGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELE 358 (453)
Q Consensus 284 v~~w~~l~~h~~--~v~~v~~s~~~--~~vas~d~tIrlWDl~t-~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~ 358 (453)
....+..|.. .+.+++|+|++ +++++.|++|++||+++ +..+.....|...+...+|+++++.+++++.|+
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-- 240 (369)
T 3zwl_B 165 --PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT-- 240 (369)
T ss_dssp --CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred --eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCc--
Confidence 0133455655 89999999876 45556789999999998 455555566766666667788889999999999
Q ss_pred ccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-C--------------eEEEEECCCCeEEEEeccc
Q 046773 359 NQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-G--------------VIRVWEVEGGEYMYSFRER 423 (453)
Q Consensus 359 ~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~--------------tIrlWD~~tG~~l~tL~gh 423 (453)
.++|||+.+++.+..+. +...+..+.+++++.++++++. + .|++||+.+++++..+.+|
T Consensus 241 -----~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 314 (369)
T 3zwl_B 241 -----NSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH 314 (369)
T ss_dssp -----EEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECC
T ss_pred -----eEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc
Confidence 99999999999888887 5566889999999999888776 5 8999999999999999999
Q ss_pred CCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 424 IGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 424 ~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+. |. +|+||+++|+++ .|++|+|||+.
T Consensus 315 ~~~-v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 315 FGP-LNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp SSC-EEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred cCc-EEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 998 87 678999999999 99999999974
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-34 Score=282.93 Aligned_cols=240 Identities=9% Similarity=0.126 Sum_probs=194.7
Q ss_pred eEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCcee
Q 046773 175 LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYW 250 (453)
Q Consensus 175 ~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~ 250 (453)
+..++|.+|.. .|.+++|+ +..|++|+.|++|+|||+++ + +..+..|...+. .++|+|++++
T Consensus 4 ~~~~~~~~h~~--------~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~-~~~~~~~~~~~~~v~----~~~~~~~~~~- 69 (304)
T 2ynn_A 4 DIKKTFSNRSD--------RVKGIDFHPTEPWVLTTLYSGRVELWNYET-QVEVRSIQVTETPVR----AGKFIARKNW- 69 (304)
T ss_dssp CCEEEEEEECS--------CEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEE----EEEEEGGGTE-
T ss_pred eeEEeecCCCC--------ceEEEEECCCCCEEEEEcCCCcEEEEECCC-CceeEEeeccCCcEE----EEEEeCCCCE-
Confidence 34678888754 68888886 67899999999999999987 4 455555655443 4899999996
Q ss_pred eEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEE
Q 046773 251 VGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVL 328 (453)
Q Consensus 251 ~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~ 328 (453)
|++||.|++|+|||+++++.+ ..+.+|.+.|.+++|+|++ +++++.|++|||||++++..+.
T Consensus 70 --l~s~s~d~~i~vwd~~~~~~~--------------~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 70 --IIVGSDDFRIRVFNYNTGEKV--------------VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE 133 (304)
T ss_dssp --EEEEETTSEEEEEETTTCCEE--------------EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE
T ss_pred --EEEECCCCEEEEEECCCCcEE--------------EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh
Confidence 889999999999999999853 3467899999999999876 4556778999999999875544
Q ss_pred E-EeeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEEee--CCCeEEEEeC
Q 046773 329 G-ERGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMGCM--NQGYALMCVE 403 (453)
Q Consensus 329 ~-~~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~~~--~~~~lls~s~ 403 (453)
. +.+|...+...+|+| ++..+++++.|+ +|+|||+.++++...+.. +...+..+.+++ ++.++++++.
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~-------~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDR-------TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEETTS-------EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEeCCC-------eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC
Confidence 3 467766665556666 457899999999 999999988776655543 345577777776 5568888877
Q ss_pred -CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 404 -GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 404 -~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++|||||+++++++.+|.+|.+. |. +|+|++++|+|+ .|++|+|||+.
T Consensus 207 D~~i~iWd~~~~~~~~~~~~h~~~-v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 207 DLTIKIWDYQTKSCVATLEGHMSN-VSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCeEEEEeCCCCccceeeCCCCCC-EEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999999999999998 87 678999999999 99999999974
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-33 Score=297.35 Aligned_cols=269 Identities=13% Similarity=0.198 Sum_probs=224.1
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
+|..+ |.+++|++ ++|++++.|++|++||. ++++++++.+|.. .|.+++|+ ++.|++++.|++
T Consensus 260 ~~~~~----v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~t~~~d~~ 326 (577)
T 2ymu_A 260 GHSSS----VNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS--------SVWGVAFSPDGQTIASASDDKT 326 (577)
T ss_dssp CCSSC----EEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSS--------CEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCC----EEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCC--------CeEEEEECCCCCEEEEEeCCCe
Confidence 78744 88999986 59999999999999996 5788899998754 57778875 678999999999
Q ss_pred EEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 214 IHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 214 IkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
|++||.+......+..|...+. .++|+|+|++ |++|+.|++|+|||. +++.+ .++.+|
T Consensus 327 i~~w~~~~~~~~~~~~~~~~v~----~~~~s~~g~~---l~~~~~dg~v~~~~~-~~~~~--------------~~~~~~ 384 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTGHSSSVW----GVAFSPDGQT---IASASDDKTVKLWNR-NGQLL--------------QTLTGH 384 (577)
T ss_dssp EEEEETTSCEEEEECCCSSCEE----EEEECTTSSE---EEEEETTSEEEEEET-TCCEE--------------EEEECC
T ss_pred EEEEeCCCCeeEEEeCCCCCEE----EEEECCCCCE---EEEEeCCCEEEEEcC-CCCEE--------------EEecCC
Confidence 9999987622444555655443 4899999996 889999999999996 44432 346788
Q ss_pred ccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC
Q 046773 294 TEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD 371 (453)
Q Consensus 294 ~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~ 371 (453)
...|.+++|+|++ +++++.|++|+|||.. ++++.++.+|...+...+|+|++..+++++.|+ +++||+.
T Consensus 385 ~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~-------~v~~w~~- 455 (577)
T 2ymu_A 385 SSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDK-------TVKLWNR- 455 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------EEEEEET-
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCC-------EEEEEEC-
Confidence 8999999999876 4556778999999964 566666777877666667788889999999999 9999996
Q ss_pred CCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEE
Q 046773 372 TFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIH 447 (453)
Q Consensus 372 tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~Ik 447 (453)
+++.+..+..|...+..+.++|++.++++++. ++|+|||. +|+++.++.+|.+. |+ +|+||+++||++ .|++|+
T Consensus 456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~-v~~l~~s~dg~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS-VRGVAFSPDGQTIASASDDKTVK 533 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSC-EEEEEECTTSSCEEEEETTSEEE
T ss_pred CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCC-EEEEEEcCCCCEEEEEECcCEEE
Confidence 56788888999888999999999999998887 99999995 79999999999998 87 678999999999 999999
Q ss_pred EEecC
Q 046773 448 LWDFG 452 (453)
Q Consensus 448 lWDl~ 452 (453)
|||..
T Consensus 534 lwd~~ 538 (577)
T 2ymu_A 534 LWNRN 538 (577)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 99963
No 30
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-34 Score=293.53 Aligned_cols=248 Identities=16% Similarity=0.174 Sum_probs=209.4
Q ss_pred EEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEE
Q 046773 167 RLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDF 243 (453)
Q Consensus 167 rlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~F 243 (453)
+.|.... ....+|.+|.. .|.+++|+ +..|++||.|++|+|||+.+.. ..++.+|.+.|. .|+|
T Consensus 92 ~~~~~~~-~~~~~l~gh~~--------~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~----~v~~ 158 (410)
T 1vyh_C 92 KEWIPRP-PEKYALSGHRS--------PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ----DISF 158 (410)
T ss_dssp CCCCCCS-SCSCEEECCSS--------CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE----EEEE
T ss_pred cccccCC-CceEeecccCC--------cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE----EEEE
Confidence 3454432 33557788764 68888886 5689999999999999998722 567778877664 4899
Q ss_pred eCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEEC
Q 046773 244 TGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDL 321 (453)
Q Consensus 244 s~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl 321 (453)
+|+|++ |+|||.|++|+|||+.+++++ +++.+|...|.+++|+|++ +++++.|++|++||+
T Consensus 159 ~~~~~~---l~sgs~D~~i~iwd~~~~~~~--------------~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 159 DHSGKL---LASCSADMTIKLWDFQGFECI--------------RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp CTTSSE---EEEEETTSCCCEEETTSSCEE--------------ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred cCCCCE---EEEEeCCCeEEEEeCCCCcee--------------EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 999986 889999999999999988754 3567889999999999876 456677899999999
Q ss_pred CCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeC-------
Q 046773 322 RNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMN------- 394 (453)
Q Consensus 322 ~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~------- 394 (453)
+++.++.++.+|...+....+++++..+++++.|+ +|+|||+.++++...+..|...+..+.++|+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~-------~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-------TVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC-------eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchh
Confidence 99998888888877766667778889999999999 9999999999999999888888999999885
Q ss_pred -------------CCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 395 -------------QGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 395 -------------~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+.++++++. ++|+|||+.+++++.++.+|.+. |+ +|+|++++|+++ .|++|+|||+.
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 457777777 99999999999999999999998 87 678999999999 99999999974
No 31
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.4e-34 Score=276.97 Aligned_cols=273 Identities=12% Similarity=0.077 Sum_probs=205.1
Q ss_pred CCeEEEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEe
Q 046773 143 DGLTCRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVI 219 (453)
Q Consensus 143 d~v~v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~ 219 (453)
|..|+.+|+||+ ++||+|. |++|||||++||+++++++.|.. ...|.+++|+ ++.|++||.|++|+|||+
T Consensus 24 ~d~y~~~l~WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~------~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 24 NDYYLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP------GEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96 (318)
T ss_dssp CCTTCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST------TCCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ccccceEEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC------CCeEEEEEECCCCCEEEEEECCCcEEEeec
Confidence 334567899987 5777765 99999999999999999875432 1368888885 678999999999999999
Q ss_pred ecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccce
Q 046773 220 DDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFV 297 (453)
Q Consensus 220 ~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v 297 (453)
++ + +..+.+|...+ ..++++++. |++|+.|+.+++|+..++.... .++.+|...+
T Consensus 97 ~~-~~~~~~~~~h~~~~------~~~~~~~~~---l~s~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 153 (318)
T 4ggc_A 97 QQ-QKRLRNMTSHSARV------GSLSWNSYI---LSSGSRSGHIHHHDVRVAEHHV-------------ATLSGHSQEV 153 (318)
T ss_dssp TT-TEEEEEEECCSSCE------EEEEEETTE---EEEEETTSEEEEEETTSSSCEE-------------EEEECCSSCE
T ss_pred CC-ceeEEEecCccceE------EEeecCCCE---EEEEecCCceEeeecCCCceeE-------------EEEcCccCce
Confidence 88 5 45555565443 355566664 8899999999999998876221 3466888899
Q ss_pred eEEEEcCCc--eEEEEcCCcEEEEECCCCceEEE----EeeccCCeEEEEEEecCC-EEEEEeCCCccccCcceEEEEEc
Q 046773 298 GRVRVTSHE--SAVACTSSRVITFDLRNQGMVLG----ERGYGRGLYVTSVDVNAE-AYIVVENRELENQNRRLAIVRRV 370 (453)
Q Consensus 298 ~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~----~~g~~~~~~v~~~~~~g~-~l~s~s~dg~~~~~~~~i~Iw~~ 370 (453)
..+.+++++ +++++.|++|+|||+++++.... ...+...+....+.+.+. .+.+++.+. +++++||+.
T Consensus 154 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~i~lwd~ 228 (318)
T 4ggc_A 154 CGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS-----DRHIRIWNV 228 (318)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT-----TCEEEEEET
T ss_pred EEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC-----CCEEEEEec
Confidence 999998765 45556789999999998753221 223333333334444443 343333322 239999999
Q ss_pred CCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC---CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCC
Q 046773 371 DTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE---GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGT 444 (453)
Q Consensus 371 ~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~---~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~ 444 (453)
.+........ +...+..+.+++++..++++++ ++|+|||+.+++++++|.||.+. |+ +|+||+++|||+ .|+
T Consensus 229 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~-V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 229 CSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-VLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp TTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSCEEEEETTT
T ss_pred cccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEecCC
Confidence 9887665543 4455888889999998887653 99999999999999999999999 88 678999999999 999
Q ss_pred cEEEEecC
Q 046773 445 NIHLWDFG 452 (453)
Q Consensus 445 ~IklWDl~ 452 (453)
+|||||+.
T Consensus 307 ~v~iWd~~ 314 (318)
T 4ggc_A 307 TLRLWRCF 314 (318)
T ss_dssp EEEEECCS
T ss_pred eEEEEECC
Confidence 99999973
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8e-34 Score=284.91 Aligned_cols=274 Identities=13% Similarity=0.156 Sum_probs=209.8
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCeEEEEec--CCCCCccccccceEEEEEEcC---CeEEEE
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRLHVRTFR--PQHSDRLGQFSRAVSGIIITD---SQLIFA 208 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~~tl~--gh~~~~~~~~s~~V~~i~f~g---~~Lasg 208 (453)
.+|..+ |+|++|++ ++||+|+.|++|+|||+.++++...+. +|.. .|.+++|++ ..|+++
T Consensus 70 ~~h~~~----v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 70 SPFDRR----VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGD--------AITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp CCCSSC----EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTC--------BEEEEEEETTEEEEEEEE
T ss_pred cCCCCC----EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCC--------ceeEEEeCCCCCCEEEEE
Confidence 378844 89999986 589999999999999999999888876 4433 688898864 689999
Q ss_pred eCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeee
Q 046773 209 TLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWR 288 (453)
Q Consensus 209 S~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~ 288 (453)
+.|++|++||+.+.....+..+...- .....++|+|++++ |++|+.|++|+|||++ ++.+ .
T Consensus 138 ~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~---l~~~~~d~~i~i~d~~-~~~~--------------~ 198 (383)
T 3ei3_B 138 SIRGATTLRDFSGSVIQVFAKTDSWD-YWYCCVDVSVSRQM---LATGDSTGRLLLLGLD-GHEI--------------F 198 (383)
T ss_dssp ETTTEEEEEETTSCEEEEEECCCCSS-CCEEEEEEETTTTE---EEEEETTSEEEEEETT-SCEE--------------E
T ss_pred eCCCEEEEEECCCCceEEEeccCCCC-CCeEEEEECCCCCE---EEEECCCCCEEEEECC-CCEE--------------E
Confidence 99999999999862234444333210 01125899999996 8899999999999994 4422 3
Q ss_pred eeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCC----CceEEEEeeccCCeEEEEEEe-cCCEEEEEeCCCcccc
Q 046773 289 MLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRN----QGMVLGERGYGRGLYVTSVDV-NAEAYIVVENRELENQ 360 (453)
Q Consensus 289 ~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t----~~~~~~~~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~ 360 (453)
++.+|...|.+++|+|++ +++++.|++|++||+++ +.++... +|...+...+|++ +++.+++++.|+
T Consensus 199 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~---- 273 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRN---- 273 (383)
T ss_dssp EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSS----
T ss_pred EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCC----
Confidence 466888999999999875 34556789999999998 4554444 5666666666777 889999999999
Q ss_pred CcceEEEEEcCCCeeEEEEEecCCC-----------------eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecc
Q 046773 361 NRRLAIVRRVDTFEEVCRFSLRADR-----------------NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRE 422 (453)
Q Consensus 361 ~~~~i~Iw~~~tg~~v~~l~~~~~~-----------------v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~g 422 (453)
.++|||+.+++++..+..+... +..+.+++++.+ +++. ++|+|||+.+++++.+|.+
T Consensus 274 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 274 ---EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp ---EEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred ---cEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 9999999998877777655311 222444555555 3334 9999999999999999988
Q ss_pred cC--CceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 423 RI--GEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 423 h~--~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
|. +. +. +|+||+++|+++.|++|+|||+.
T Consensus 349 ~~~~~~-~~~~~~s~~g~~l~s~sd~~i~iw~~~ 381 (383)
T 3ei3_B 349 PNAAGI-ISLNKFSPTGDVLASGMGFNILIWNRE 381 (383)
T ss_dssp TTBCSC-CCEEEECTTSSEEEEEETTEEEEEECC
T ss_pred CCCCce-EEEEEEecCccEEEEecCCcEEEEecC
Confidence 53 33 44 78999999999889999999985
No 33
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-33 Score=289.02 Aligned_cols=271 Identities=12% Similarity=0.079 Sum_probs=211.1
Q ss_pred CCeEEEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEe
Q 046773 143 DGLTCRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVI 219 (453)
Q Consensus 143 d~v~v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~ 219 (453)
|-.|+.+|++|. ++||.|. |++|+|||+.||++++++..|.. ...|.+|+|+ |+.||+|+.|++|+|||+
T Consensus 104 ~d~y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~------~~~V~sv~fspdg~~lasgs~Dg~v~iWd~ 176 (420)
T 4gga_A 104 NDYYLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP------GEYISSVAWIKEGNYLAVGTSSAEVQLWDV 176 (420)
T ss_dssp CCTTCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST------TCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ccccceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC------CCcEEEEEECCCCCEEEEEECCCeEEEEEc
Confidence 346678899986 6787775 99999999999999998875321 1368889986 678999999999999999
Q ss_pred ecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccce
Q 046773 220 DDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFV 297 (453)
Q Consensus 220 ~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v 297 (453)
++ + +..+.+|...+ .+++++++. |++|+.|+++++||..+..... .++.+|...+
T Consensus 177 ~~-~~~~~~~~~h~~~v------~~~s~~~~~---l~sgs~d~~i~~~d~~~~~~~~-------------~~~~~h~~~~ 233 (420)
T 4gga_A 177 QQ-QKRLRNMTSHSARV------GSLSWNSYI---LSSGSRSGHIHHHDVRVAEHHV-------------ATLSGHSQEV 233 (420)
T ss_dssp TT-TEEEEEECCCSSCE------EEEEEETTE---EEEEETTSEEEEEETTSSSCEE-------------EEEECCSSCE
T ss_pred CC-CcEEEEEeCCCCce------EEEeeCCCE---EEEEeCCCceeEeeecccceee-------------EEecccccce
Confidence 88 5 45555665543 344555554 8999999999999998866221 3567888999
Q ss_pred eEEEEcCCce--EEEEcCCcEEEEECCCCceE----EEEeeccCCeEEEEEEecC-CEEEEEe--CCCccccCcceEEEE
Q 046773 298 GRVRVTSHES--AVACTSSRVITFDLRNQGMV----LGERGYGRGLYVTSVDVNA-EAYIVVE--NRELENQNRRLAIVR 368 (453)
Q Consensus 298 ~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~----~~~~g~~~~~~v~~~~~~g-~~l~s~s--~dg~~~~~~~~i~Iw 368 (453)
..+.+++++. ++++.|+.|++||+.+++.. .....|...+...++.+.+ +.+++++ .|+ +|+||
T Consensus 234 ~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~-------~I~iw 306 (420)
T 4gga_A 234 CGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-------HIRIW 306 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC-------EEEEE
T ss_pred eeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC-------EEEEE
Confidence 9999998764 45567899999999987532 2233444444444555544 4455544 456 99999
Q ss_pred EcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC---CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-e
Q 046773 369 RVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE---GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-C 442 (453)
Q Consensus 369 ~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~---~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~ 442 (453)
|+.+++++..+..+ ..+..+.++++++.++++++ ++|+|||+.+++++.+|.||.+. |+ +|+||+++|||+ .
T Consensus 307 d~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 307 NVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-VLSLTMSPDGATVASAAA 384 (420)
T ss_dssp ETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSCEEEEET
T ss_pred eCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEec
Confidence 99999998888655 45788899999999987753 99999999999999999999999 88 678999999999 9
Q ss_pred CCcEEEEecC
Q 046773 443 GTNIHLWDFG 452 (453)
Q Consensus 443 D~~IklWDl~ 452 (453)
|++|||||+-
T Consensus 385 D~tvriWdv~ 394 (420)
T 4gga_A 385 DETLRLWRCF 394 (420)
T ss_dssp TTEEEEECCS
T ss_pred CCeEEEEECC
Confidence 9999999973
No 34
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=277.97 Aligned_cols=241 Identities=12% Similarity=0.141 Sum_probs=202.1
Q ss_pred eEEEEecCCCCCccccccceEEEEEEc------CCeEEEEeCCCCEEEEEeecCC---cceEEeeecceecCceEEEEeC
Q 046773 175 LHVRTFRPQHSDRLGQFSRAVSGIIIT------DSQLIFATLDGDIHVAVIDDVA---NETRTAHFGSVMDDGVLIDFTG 245 (453)
Q Consensus 175 ~~~~tl~gh~~~~~~~~s~~V~~i~f~------g~~LasgS~D~tIkvWd~~~~g---~~~~~~~~~~v~~~~~~v~Fs~ 245 (453)
...+.+.+|.. .|.+++|+ +..|+|||.|++||||+++... ...+.+|...|. .++|+|
T Consensus 23 ~~~~~~~~H~~--------~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~----~~~~~~ 90 (321)
T 3ow8_A 23 ILFKQEQAHDD--------AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV----SVDISH 90 (321)
T ss_dssp EEEEETTSSSS--------CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE----EEEECS
T ss_pred heeeecccCCC--------cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE----EEEECC
Confidence 34567777764 68889885 4589999999999999998621 123556766654 589999
Q ss_pred CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEE--EEcCCcEEEEECCC
Q 046773 246 CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAV--ACTSSRVITFDLRN 323 (453)
Q Consensus 246 dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~v--as~d~tIrlWDl~t 323 (453)
++.. |+|||.|++|+|||+++++.+ ..+..|...+.+++|+|++..+ ++.+++|++||+++
T Consensus 91 ~~~~---l~s~s~D~~i~lWd~~~~~~~--------------~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~ 153 (321)
T 3ow8_A 91 TLPI---AASSSLDAHIRLWDLENGKQI--------------KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 153 (321)
T ss_dssp SSSE---EEEEETTSEEEEEETTTTEEE--------------EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTT
T ss_pred CCCE---EEEEeCCCcEEEEECCCCCEE--------------EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCC
Confidence 9985 889999999999999998853 2355667778899999987543 34578999999999
Q ss_pred CceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC
Q 046773 324 QGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE 403 (453)
Q Consensus 324 ~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~ 403 (453)
++....+..|...+...+|+|+++.+++++.|+ +|+|||+.+++++.++..|...+..+.++|++.++++++.
T Consensus 154 ~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg-------~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 154 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-------IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp CSEEEEEECSSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECT
T ss_pred CceeEEecCCCceEEEEEECCCCCEEEEEcCCC-------eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcC
Confidence 987776666666666677888999999999999 9999999999999999988888999999999999988887
Q ss_pred -CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 404 -GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 404 -~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++|+|||+.+++++.++.+|.+. |. +|+||+++|+++ .|++|+|||+.
T Consensus 227 dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 227 DGYIKIYDVQHANLAGTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCeEEEEECCCcceeEEEcCCCCc-eEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999999999999999998 87 678999999999 99999999975
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.5e-34 Score=280.73 Aligned_cols=283 Identities=13% Similarity=0.118 Sum_probs=217.5
Q ss_pred CCCCCCCCeEEEEEEecC------CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcC------Ce
Q 046773 137 SDVDNPDGLTCRCLTLSD------LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD------SQ 204 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~------~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g------~~ 204 (453)
.||..+ |+|++|++ ..+++++.|++|+|||+.++++++++..|... .+...|.+++|+. ..
T Consensus 15 ~~h~~~----v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 15 EDHNQP----LFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA---DADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp CTTCSC----EEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECS---CTTCCEEEEEEEECTTTCCEE
T ss_pred cCCCCc----eEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecccc---CCCCcEEEEEeccCCCCCCCE
Confidence 389855 89999995 34555555669999999999998888765321 1123577887753 47
Q ss_pred EEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeC-CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCc
Q 046773 205 LIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTG-CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~-dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
|++|+.|++|+|||+.+.. +..+..|...+. .++|+| +++. |++|+.|++|+|||+++++...-
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~----~~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~------- 153 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKHYVGHGNAIN----ELKFHPRDPNL---LLSVSKDHALRLWNIQTDTLVAI------- 153 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEEEESCCSCEE----EEEECSSCTTE---EEEEETTSCEEEEETTTTEEEEE-------
T ss_pred EEEecCCCEEEEEEchhceEeeeecCCCCcEE----EEEECCCCCCE---EEEEeCCCeEEEEEeecCeEEEE-------
Confidence 9999999999999998722 455566666554 489999 8875 88999999999999999884310
Q ss_pred ceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEee--------------------------cc
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERG--------------------------YG 334 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g--------------------------~~ 334 (453)
+..+.+|...|.+++|+|++ +++++.|++|++||+++++++..... ..
T Consensus 154 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 154 ----FGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp ----ECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred ----ecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 11125788999999999876 45556789999999998754321111 01
Q ss_pred CCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCee--------------EEEEEecCCCeeEEEEeeC--CCeE
Q 046773 335 RGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEE--------------VCRFSLRADRNVNVMGCMN--QGYA 398 (453)
Q Consensus 335 ~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~--------------v~~l~~~~~~v~~~~~~~~--~~~l 398 (453)
+...|.++.++++.+++++.|+ .++||+..++++ +..+..+...+..+.++++ +.++
T Consensus 230 ~~~~v~~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 230 HRNYVDCVRWLGDLILSKSCEN-------AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp CSSCCCEEEEETTEEEEECSSS-------EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred CcceEEEEEEcCCEEEEEecCC-------EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 3345677777799999999999 999999987643 7777778778888999998 8888
Q ss_pred EEEeC-CeEEEEECCCCeE----EEEeccc--CCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 399 LMCVE-GVIRVWEVEGGEY----MYSFRER--IGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 399 ls~s~-~tIrlWD~~tG~~----l~tL~gh--~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++++. ++|+|||+.++++ +.++.+| ... |+ +|+||+++|+++ .|++|+|||+.
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAA-IRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSC-EEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCc-eEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 88877 9999999999864 4588888 566 77 678999999999 99999999984
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=283.27 Aligned_cols=235 Identities=12% Similarity=-0.003 Sum_probs=184.7
Q ss_pred EEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEec----CCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEe
Q 046773 147 CRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFR----PQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVI 219 (453)
Q Consensus 147 v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~----gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~ 219 (453)
|++++|++ ++|++|+.|++|||||+++++++.+++ +|.. .|.+++|+ ++.|++||.|++|+|||+
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~--------~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDD--------IVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSS--------CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCC--------CEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 89999997 589999999999999999999876543 5543 68889885 679999999999999999
Q ss_pred ecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccce
Q 046773 220 DDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFV 297 (453)
Q Consensus 220 ~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v 297 (453)
++ + +.++.+|.+.|. .++|+|+++. .|+|||.|++|+|||+++++...- -....|...+
T Consensus 157 ~~-~~~~~~~~~h~~~V~----~~~~~~~~~~--~l~s~s~D~~v~iwd~~~~~~~~~------------~~~~~~~~~~ 217 (344)
T 4gqb_B 157 AQ-QVVLSSYRAHAAQVT----CVAASPHKDS--VFLSCSEDNRILLWDTRCPKPASQ------------IGCSAPGYLP 217 (344)
T ss_dssp TT-TEEEEEECCCSSCEE----EEEECSSCTT--EEEEEETTSCEEEEETTSSSCEEE------------CC----CCCE
T ss_pred CC-CcEEEEEcCcCCceE----EEEecCCCCC--ceeeeccccccccccccccceeee------------eecceeeccc
Confidence 88 5 566777877664 4899999875 378999999999999999883210 0012344568
Q ss_pred eEEEEcCCc---eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCC-EEEEEeCCCccccCcceEEEEEcCCC
Q 046773 298 GRVRVTSHE---SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAE-AYIVVENRELENQNRRLAIVRRVDTF 373 (453)
Q Consensus 298 ~~v~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~-~l~s~s~dg~~~~~~~~i~Iw~~~tg 373 (453)
.+++|+|+. +++++.|++|+|||+++++++.++.+|...+...+|+|++. .++++|.|+ +|+|||..++
T Consensus 218 ~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~-------~i~vwd~~~~ 290 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC-------SLAVLDSSLS 290 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS-------CEEEECTTCC
T ss_pred eeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC-------eEEEEECCCC
Confidence 899998743 34456789999999999988888888877766666777774 588999999 9999999998
Q ss_pred eeEEEEEecCCCeeEEEEeeCCCeEE-EEeC-CeEEEEECCCCeE
Q 046773 374 EEVCRFSLRADRNVNVMGCMNQGYAL-MCVE-GVIRVWEVEGGEY 416 (453)
Q Consensus 374 ~~v~~l~~~~~~v~~~~~~~~~~~ll-s~s~-~tIrlWD~~tG~~ 416 (453)
+++ .+..|.+.|.++.|+|++.+++ +++. ++|++|++.+...
T Consensus 291 ~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 291 ELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred cEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 765 4678888899999999988765 5665 9999999987543
No 37
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=307.75 Aligned_cols=260 Identities=13% Similarity=0.044 Sum_probs=191.9
Q ss_pred EEEEEeCCCcEEEEECCCCeEE----EEecCCCCCccccccceEEEEEEcC--------CeEEEEeCCCCEEEEEeecCC
Q 046773 156 YLACGFADGAVRLFDLTTRLHV----RTFRPQHSDRLGQFSRAVSGIIITD--------SQLIFATLDGDIHVAVIDDVA 223 (453)
Q Consensus 156 ~LaSGS~D~TIrlWD~~tg~~~----~tl~gh~~~~~~~~s~~V~~i~f~g--------~~LasgS~D~tIkvWd~~~~g 223 (453)
.|||+|+|++|||||+.++++. .++.+|.. .|.+++|++ ..||+||.|++|+|||+....
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~--------~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG--------EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCC--------SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCC--------cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCc
Confidence 3566789999999999998763 45554433 578888864 489999999999999997621
Q ss_pred c------------ceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeee
Q 046773 224 N------------ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 224 ~------------~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~ 291 (453)
. .++.+|...+. .++|+|++ .|++||.|++|+|||+++++.. ..++.
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~~~v~----sv~~s~~~----~lasgs~DgtV~lWD~~~~~~~-------------~~~~~ 305 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLADSLIT----TFDFLSPT----TVVCGFKNGFVAEFDLTDPEVP-------------SFYDQ 305 (524)
T ss_dssp SSSSEEECCCSCSEEECCTTTCEE----EEEESSSS----EEEEEETTSEEEEEETTBCSSC-------------SEEEE
T ss_pred cccccceeecCceEEEEcCCCCEE----EEEecCCC----eEEEEeCCCEEEEEECCCCCCc-------------eEEee
Confidence 1 13344544443 48999875 3899999999999999987521 02467
Q ss_pred eeccceeEE--EEcCCc---eEEEEcCCcEEEEECCCCceEEEEeeccCC--eEEEEEEecCCEEEEEeCCCccccCcce
Q 046773 292 EFTEFVGRV--RVTSHE---SAVACTSSRVITFDLRNQGMVLGERGYGRG--LYVTSVDVNAEAYIVVENRELENQNRRL 364 (453)
Q Consensus 292 ~h~~~v~~v--~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~~g~~~~--~~v~~~~~~g~~l~s~s~dg~~~~~~~~ 364 (453)
+|..+|.+| .|++++ ++++|.|++|||||+++++++.++.+|... +...+|+|++..+++++.|+ +
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~-------t 378 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS-------S 378 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS-------E
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC-------c
Confidence 889999999 467754 456678899999999998776665555432 33467888888899999888 9
Q ss_pred EEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCC------------------------------
Q 046773 365 AIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEG------------------------------ 413 (453)
Q Consensus 365 i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~t------------------------------ 413 (453)
|+|||+.++.++.++..|.+.|.+++++|++.++++++. ++|+|||+..
T Consensus 379 v~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 379 LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEE
T ss_pred EEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeE
Confidence 999999999998889999999999999999999988887 9999987421
Q ss_pred --------------CeEEEEecccCCceEE--EEecCCC---EEEEE-eCCcEEEEecC
Q 046773 414 --------------GEYMYSFRERIGEEVI--AFVGDDR---HVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 414 --------------G~~l~tL~gh~~~~V~--a~s~d~~---~lasg-~D~~IklWDl~ 452 (453)
|+++.+|.+|.+. |+ +|+|++. +||+| .||+||||+++
T Consensus 459 ~~~~~~~~~~~~~~g~~~~~l~gh~~~-V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 459 RIDSSYEVYPLTVNDVSKAKIDAHGIN-ITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp EECCCCCCCC-------------CCCS-CCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred EccCCceecccccCCcceeeecCCCce-EEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 3455667778777 76 7889854 99999 99999999986
No 38
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=256.90 Aligned_cols=267 Identities=15% Similarity=0.150 Sum_probs=211.7
Q ss_pred CCCCCCCCeEEEEEEec-CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 137 SDVDNPDGLTCRCLTLS-DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs-~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
.||.++ |+|++|. +++||+|+.|++|+|||+.++++...+.+|.. .|.+++|+ ++.|++|+.|++
T Consensus 15 ~~h~~~----v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 15 KGHDQD----VRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQG--------FLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp CCCSSC----EEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSS--------CEEEEEEETTTTEEEEEETTSC
T ss_pred hCCCCC----cEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCc--------cEEEEEECCCCCEEEEecCCCe
Confidence 489854 7888883 57999999999999999999999999987654 57778775 678999999999
Q ss_pred EEEEEeecCC----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeee
Q 046773 214 IHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRM 289 (453)
Q Consensus 214 IkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~ 289 (453)
|++|++.... ...+..|...+. .++|+ ++ .|++|+.|++|++|| +++.. ..
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~--~~---~l~~~~~d~~i~~~d--~~~~~--------------~~ 137 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVC----SLSFQ--DG---VVISGSWDKTAKVWK--EGSLV--------------YN 137 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEE----EEEEE--TT---EEEEEETTSEEEEEE--TTEEE--------------EE
T ss_pred EEEEEeeecCCCCcccchhhcccCEE----EEEec--CC---EEEEEeCCCCEEEEc--CCcEE--------------Ee
Confidence 9999986521 344555655543 36774 44 388999999999999 44422 23
Q ss_pred eeeeccceeEEEEcC---CceEEEEcCCcEEEEECCCCceEEEEee-ccCCeEEEEEEecCCEEEEEeCCCccccCcceE
Q 046773 290 LTEFTEFVGRVRVTS---HESAVACTSSRVITFDLRNQGMVLGERG-YGRGLYVTSVDVNAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 290 l~~h~~~v~~v~~s~---~~~~vas~d~tIrlWDl~t~~~~~~~~g-~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i 365 (453)
+..|..++.++.+.+ +.+++++.|++|++||.. +....... |...+...++++++. +++++.++ .+
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg-------~i 207 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG-------LI 207 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETTS-------EE
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCCC-------eE
Confidence 567888999998864 335666778999999944 44444444 555555666777776 89999999 99
Q ss_pred EEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEe
Q 046773 366 IVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASC 442 (453)
Q Consensus 366 ~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~ 442 (453)
+|||..+++++..+..|...+..+.+++++ ++++++. ++|+|||+.+++++.++..|.+. |. +++||+++++++.
T Consensus 208 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~ 285 (313)
T 3odt_A 208 KLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAIS-IWSVDCMSNGDIIVGSS 285 (313)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSC-EEEEEECTTSCEEEEET
T ss_pred EEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCce-EEEEEEccCCCEEEEeC
Confidence 999999999999999898889999999988 5677766 99999999999999999999888 77 6779998655449
Q ss_pred CCcEEEEecC
Q 046773 443 GTNIHLWDFG 452 (453)
Q Consensus 443 D~~IklWDl~ 452 (453)
|++|+|||+.
T Consensus 286 dg~i~iw~~~ 295 (313)
T 3odt_A 286 DNLVRIFSQE 295 (313)
T ss_dssp TSCEEEEESC
T ss_pred CCcEEEEeCC
Confidence 9999999975
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.7e-32 Score=270.12 Aligned_cols=277 Identities=10% Similarity=0.099 Sum_probs=217.8
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCe--EEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRL--HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLD 211 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~--~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D 211 (453)
.|.++ |+|++|++ ++||+|+.|++|+|||+.+++ +++++.+|.. .|.+++|+ ++.|++++.|
T Consensus 6 ~~~~~----i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~~~~~d 73 (372)
T 1k8k_C 6 FLVEP----ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG--------QVTGVDWAPDSNRIVTCGTD 73 (372)
T ss_dssp SCSSC----CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS--------CEEEEEEETTTTEEEEEETT
T ss_pred ccCCC----eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC--------cccEEEEeCCCCEEEEEcCC
Confidence 36644 78999976 699999999999999999998 8999988654 57788875 7789999999
Q ss_pred CCEEEEEeecCC--cceE--EeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeee
Q 046773 212 GDIHVAVIDDVA--NETR--TAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGW 287 (453)
Q Consensus 212 ~tIkvWd~~~~g--~~~~--~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w 287 (453)
++|++||+++ + ...+ ..|...+. .++|+|++++ |++|+.|++|+|||+++++...- . -
T Consensus 74 g~i~vwd~~~-~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~~~~~d~~v~i~d~~~~~~~~~--------~--~ 135 (372)
T 1k8k_C 74 RNAYVWTLKG-RTWKPTLVILRINRAAR----CVRWAPNEKK---FAVGSGSRVISICYFEQENDWWV--------C--K 135 (372)
T ss_dssp SCEEEEEEET-TEEEEEEECCCCSSCEE----EEEECTTSSE---EEEEETTSSEEEEEEETTTTEEE--------E--E
T ss_pred CeEEEEECCC-CeeeeeEEeecCCCcee----EEEECCCCCE---EEEEeCCCEEEEEEecCCCccee--------e--e
Confidence 9999999987 4 1122 22433332 4899999986 88999999999999998761100 0 0
Q ss_pred eeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECC------------------CCceEEEEeeccCCeEEEEEEecCC
Q 046773 288 RMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLR------------------NQGMVLGERGYGRGLYVTSVDVNAE 347 (453)
Q Consensus 288 ~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~------------------t~~~~~~~~g~~~~~~v~~~~~~g~ 347 (453)
.....|...|.+++|+|++ +++++.|++|++||++ +++++....+|...+...+++++++
T Consensus 136 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 136 HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 1235678899999999876 4455678999999954 5666665566666666666778888
Q ss_pred EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCC--Ce--EE------
Q 046773 348 AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEG--GE--YM------ 417 (453)
Q Consensus 348 ~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~t--G~--~l------ 417 (453)
.+++++.|+ .++|||+.+++++..+..+...+..+.+++++.+++++.++.|++||+.+ |+ ++
T Consensus 216 ~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 288 (372)
T 1k8k_C 216 RVAWVSHDS-------TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP 288 (372)
T ss_dssp EEEEEETTT-------EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC
T ss_pred EEEEEeCCC-------EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCcc
Confidence 999999999 99999999999999999888889999999998877777559999999988 53 11
Q ss_pred ------------------------------EEe-cccCCceEEEE--e-cCC---CEEEEE-eCCcEEEEecC
Q 046773 418 ------------------------------YSF-RERIGEEVIAF--V-GDD---RHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 418 ------------------------------~tL-~gh~~~~V~a~--s-~d~---~~lasg-~D~~IklWDl~ 452 (453)
..+ .+|.+. |+++ . +++ ++|+|+ .|++|+|||+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 289 KQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS-VSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp --------CHHHHHHHCCCCC---------CCCSSSSSSC-EEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccchhhhcchhhhhhhcccccccccCccccccccccccCC-cceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 334 489888 8854 3 677 899999 99999999973
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.6e-33 Score=269.91 Aligned_cols=238 Identities=8% Similarity=0.040 Sum_probs=184.3
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCC--CeEEEEecCCCCCccccccceEEEEEEc----CCeEEEE
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTT--RLHVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLIFA 208 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~t--g~~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~Lasg 208 (453)
.||.++ |++++|++ ++|||||.|++|||||+++ ++++++|.+|.. .|.+++|+ ++.|+||
T Consensus 6 ~~h~~~----V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~--------~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 6 NAHNEM----IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEG--------PVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp CSCSSC----EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSS--------CEEEEEECCGGGCSEEEEE
T ss_pred cCCcCc----eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccC--------CeEEEEecCCCcCCEEEEE
Confidence 489844 88999985 6999999999999999974 478899999765 68889884 6789999
Q ss_pred eCCCCEEEEEeecCC---cceEEeeecceecCceEEEEeCC--CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcc
Q 046773 209 TLDGDIHVAVIDDVA---NETRTAHFGSVMDDGVLIDFTGC--SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 209 S~D~tIkvWd~~~~g---~~~~~~~~~~v~~~~~~v~Fs~d--g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
|.|++|+|||+++.. +..+.+|...+. .|+|+|+ |++ |++|+.|++|+|||++++....
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~----~v~~~p~~~g~~---l~s~s~d~~v~~wd~~~~~~~~--------- 137 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAVHSASVN----SVQWAPHEYGPM---LLVASSDGKVSVVEFKENGTTS--------- 137 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECCCSSCEE----EEEECCGGGCSE---EEEEETTSEEEEEEBCSSSCBC---------
T ss_pred cCCCEEEEEEcCCCceEEEEEeecCCCcee----EEEeCcCCCCcE---EEEEECCCcEEEEEecCCCcee---------
Confidence 999999999998621 233445655543 4899998 765 8899999999999998764110
Q ss_pred eeeeeeeeeeccceeEEEEcCC---------------ceEEEEcCCcEEEEECCCCc----eEEEEeeccCCeEEEEEEe
Q 046773 284 VMGWRMLTEFTEFVGRVRVTSH---------------ESAVACTSSRVITFDLRNQG----MVLGERGYGRGLYVTSVDV 344 (453)
Q Consensus 284 v~~w~~l~~h~~~v~~v~~s~~---------------~~~vas~d~tIrlWDl~t~~----~~~~~~g~~~~~~v~~~~~ 344 (453)
-..+.+|...|.+++|+|+ .+++++.|++|||||++++. +..++.+|...+...+|+|
T Consensus 138 ---~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 138 ---PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp ---CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred ---eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC
Confidence 0245688899999999985 35666788999999998865 3344567766555555666
Q ss_pred cC---CEEEEEeCCCccccCcceEEEEEcCCCe--e-EEEE--EecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECC
Q 046773 345 NA---EAYIVVENRELENQNRRLAIVRRVDTFE--E-VCRF--SLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVE 412 (453)
Q Consensus 345 ~g---~~l~s~s~dg~~~~~~~~i~Iw~~~tg~--~-v~~l--~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~ 412 (453)
++ ..+++++.|+ +|+||+.++++ . ...+ ..++..+..+.++|++.++++++. ++|+||+..
T Consensus 215 ~~~~~~~las~s~D~-------~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 215 TVLLRSYMASVSQDR-------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCSSSEEEEEEETTS-------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCCceEEEEEECCC-------cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 63 6789999999 99999998753 1 1222 234567889999999999988887 999999987
No 41
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.2e-32 Score=277.11 Aligned_cols=269 Identities=13% Similarity=0.193 Sum_probs=213.5
Q ss_pred CCCCCCCCeEEEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc----CCeEEEEeCC
Q 046773 137 SDVDNPDGLTCRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLIFATLD 211 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~LasgS~D 211 (453)
.||..+ |+|++|++ .+|+||+.|++|+|||++++++++++.+|.. .|.+++|. +..|++|+.|
T Consensus 159 ~~h~~~----V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~--------~v~~l~~~~~~~~~~l~s~s~d 226 (464)
T 3v7d_B 159 SGHDGG----VWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS--------TVRCLDIVEYKNIKYIVTGSRD 226 (464)
T ss_dssp CCCSSC----EEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEEEEEEEESSSCEEEEEEETT
T ss_pred eCCCcC----EEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCC--------ccEEEEEecCCCCCEEEEEcCC
Confidence 378854 89999986 4999999999999999999999999998754 57777764 4679999999
Q ss_pred CCEEEEEeecCC-c-----------------------ceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeC
Q 046773 212 GDIHVAVIDDVA-N-----------------------ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDR 267 (453)
Q Consensus 212 ~tIkvWd~~~~g-~-----------------------~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~ 267 (453)
++|++||+.+.. . ..+.+|... ...+++++++ |++|+.|++|+|||+
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~---l~~~~~d~~i~vwd~ 297 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS------VRTVSGHGNI---VVSGSYDNTLIVWDV 297 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC------EEEEEEETTE---EEEEETTSCEEEEET
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce------EEEEcCCCCE---EEEEeCCCeEEEEEC
Confidence 999999997621 1 112223322 2456777775 889999999999999
Q ss_pred CCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEec
Q 046773 268 QAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVN 345 (453)
Q Consensus 268 ~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~ 345 (453)
++++.+ ..+.+|...|.+++|+|++ +++++.|++|++||+++++++.++.+|. ..|.++.++
T Consensus 298 ~~~~~~--------------~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~ 361 (464)
T 3v7d_B 298 AQMKCL--------------YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT--ALVGLLRLS 361 (464)
T ss_dssp TTTEEE--------------EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEC
T ss_pred CCCcEE--------------EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC--CcEEEEEEc
Confidence 998853 3466788999999999875 4566778999999999998877776664 456788888
Q ss_pred CCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEE-ecccC
Q 046773 346 AEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYS-FRERI 424 (453)
Q Consensus 346 g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~t-L~gh~ 424 (453)
++.+++++.|+ +++|||+.+++....+. +...+..+.+++++.+++++++++|+|||+++|++++. +.+|.
T Consensus 362 ~~~l~s~s~dg-------~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~ 433 (464)
T 3v7d_B 362 DKFLVSAAADG-------SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA 433 (464)
T ss_dssp SSEEEEEETTS-------EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTC
T ss_pred CCEEEEEeCCC-------cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCC
Confidence 99999999999 99999999987665543 44446677888999988888889999999999999987 56777
Q ss_pred CceEEEEecCCCEEEEE--eCCcEE--EEec
Q 046773 425 GEEVIAFVGDDRHVAAS--CGTNIH--LWDF 451 (453)
Q Consensus 425 ~~~V~a~s~d~~~lasg--~D~~Ik--lWDl 451 (453)
+. |++++++++.++++ .|+.+. +|||
T Consensus 434 ~~-v~~v~~~~~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 434 DQ-IWSVNFKGKTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp SE-EEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred Cc-EEEEEecCCEEEEEEEeCCeEEEEEeec
Confidence 77 99888888877655 676554 4555
No 42
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=274.92 Aligned_cols=269 Identities=8% Similarity=0.043 Sum_probs=219.6
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~ 222 (453)
|+|++|++ ++||+|+.|++|+||| .+++++.++.+|.. .|.+++|+ ++.|++++.|++|++||+.+
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~- 180 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRA--------PIVSVKWNKDGTHIISMDVENVTILWNVIS- 180 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCS--------CEEEEEECTTSSEEEEEETTCCEEEEETTT-
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCc--------cEEEEEECCCCCEEEEEecCCeEEEEECCC-
Confidence 89999986 6999999999999999 78899999987654 57888885 67899999999999999987
Q ss_pred C--cceEEeeecce--------ecC---ceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeee
Q 046773 223 A--NETRTAHFGSV--------MDD---GVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRM 289 (453)
Q Consensus 223 g--~~~~~~~~~~v--------~~~---~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~ 289 (453)
+ ...+..+.... ..+ ...+.|+|++. +++++.|+.|++||+++++.. ..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~i~~~d~~~~~~~--------------~~ 242 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK----FVIPGPKGAIFVYQITEKTPT--------------GK 242 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTE----EEEECGGGCEEEEETTCSSCS--------------EE
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE----EEEEcCCCeEEEEEcCCCcee--------------ee
Confidence 4 22232232210 000 12478999875 678999999999999988732 23
Q ss_pred eeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEE
Q 046773 290 LTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIV 367 (453)
Q Consensus 290 l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~I 367 (453)
+.+|...|.+++|+|++ +++++.|++|++||+++++++....+|...+...++++++ .+++++.|+ .++|
T Consensus 243 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~-------~i~i 314 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDG-------SVRL 314 (425)
T ss_dssp ECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTS-------EEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCC-------cEEE
Confidence 55788899999999876 4555678999999999987766666666655556667777 899999999 9999
Q ss_pred EEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCe--------------------EEEEecccCC-
Q 046773 368 RRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGE--------------------YMYSFRERIG- 425 (453)
Q Consensus 368 w~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~--------------------~l~tL~gh~~- 425 (453)
|++.+++++..+..+...+..+.+++++.++++++. ++|+|||+.+++ ++.++.+|..
T Consensus 315 ~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (425)
T 1r5m_A 315 WSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN 394 (425)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCC
T ss_pred EECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccC
Confidence 999999999999888888999999999999988887 999999999998 9999999976
Q ss_pred -ceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 426 -EEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 426 -~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
. |. +|+||+++|+++ .|++|+|||+.
T Consensus 395 ~~-v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 395 DY-IFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CC-EEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred Cc-eEEEEccCCCceEEEEecCceEEEEeec
Confidence 6 87 677999999999 99999999986
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=283.64 Aligned_cols=279 Identities=14% Similarity=0.159 Sum_probs=213.5
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCC----CeEEEEecCCCCCccccccceEEEEEEc---CCeEEEE
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTT----RLHVRTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFA 208 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~t----g~~~~tl~gh~~~~~~~~s~~V~~i~f~---g~~Lasg 208 (453)
+|..+ |+|++|++ ++||+|+.|++|+|||+.+ .+++.++.+|.. .|.+++|+ +..|+++
T Consensus 65 ~~~~~----v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 65 QVDSK----FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSS--------SVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CCSSC----EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSS--------CCCEEEECSSSTTBEEEE
T ss_pred ecCCc----eEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCcc--------ceEEEEEcCCCCCEEEEE
Confidence 46533 88999976 6999999999999999998 468899988764 57778886 5689999
Q ss_pred eCCCCEEEEEeecCCc------ceE-----EeeecceecCceEEEEeCC-CceeeEEEEeeCCCeEEEeeCCCCcEEecc
Q 046773 209 TLDGDIHVAVIDDVAN------ETR-----TAHFGSVMDDGVLIDFTGC-SRYWVGLYAGLAGRAFHIWDRQAEEVFVGG 276 (453)
Q Consensus 209 S~D~tIkvWd~~~~g~------~~~-----~~~~~~v~~~~~~v~Fs~d-g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~ 276 (453)
+.|++|++||+.+ +. ..+ ..|...+. .++|+|+ ++. |++++.|++|+|||+++++...-
T Consensus 133 ~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~~---l~~~~~dg~v~iwd~~~~~~~~~- 203 (416)
T 2pm9_A 133 GNNGEIFIWDMNK-CTESPSNYTPLTPGQSMSSVDEVI----SLAWNQSLAHV---FASAGSSNFASIWDLKAKKEVIH- 203 (416)
T ss_dssp CSSSCEEBCBTTT-TSSCTTTCCCBCCCCSCCSSCCCC----EEEECSSCTTE---EEEESSSSCEEEEETTTTEEEEE-
T ss_pred cCCCeEEEEECCC-CccccccccccccccccCCCCCee----EEEeCCCCCcE---EEEEcCCCCEEEEECCCCCcceE-
Confidence 9999999999987 31 111 23444332 5899999 554 88999999999999999884310
Q ss_pred cccCCcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCC---cEEEEECCCCc-eEEEEe-eccCCeEEEEEEe-cCC
Q 046773 277 DLTDHNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSS---RVITFDLRNQG-MVLGER-GYGRGLYVTSVDV-NAE 347 (453)
Q Consensus 277 ~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~---tIrlWDl~t~~-~~~~~~-g~~~~~~v~~~~~-~g~ 347 (453)
+..+ ....+|...+.+++|+|++ +++++.|+ +|++||+++++ ++..+. +|...+...+|++ +++
T Consensus 204 -~~~~------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 204 -LSYT------SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp -ECCC------CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS
T ss_pred -Eecc------ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC
Confidence 0000 0112347889999999875 34445666 99999999874 333345 6666555556666 778
Q ss_pred EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCC-CeEEEEeC-CeEEEEECCCCeEEEEecc---
Q 046773 348 AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQ-GYALMCVE-GVIRVWEVEGGEYMYSFRE--- 422 (453)
Q Consensus 348 ~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~-~~lls~s~-~tIrlWD~~tG~~l~tL~g--- 422 (453)
.+++++.|+ +++||++.+++++..+..|...+..+.++|++ .++++++. ++|+|||+.+++.......
T Consensus 277 ~l~s~~~dg-------~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 349 (416)
T 2pm9_A 277 LLLSSGRDN-------TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETET 349 (416)
T ss_dssp CEEEEESSS-------EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-----
T ss_pred eEEEEeCCC-------CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccc
Confidence 999999999 99999999999999999998889999999998 67777666 9999999998765433221
Q ss_pred --------------------------------cCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 423 --------------------------------RIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 423 --------------------------------h~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
|... |. +|+|||++|+++ .|++|+|||+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 350 KQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEP-SPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp -----------------CCSCCCSSCCCCCSTTCCC-SCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cccCCcccccccccccccccccccccccCCccccCC-ccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 3444 53 899999999999 99999999985
No 44
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.8e-32 Score=269.38 Aligned_cols=246 Identities=13% Similarity=0.118 Sum_probs=202.4
Q ss_pred CeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCcee
Q 046773 174 RLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYW 250 (453)
Q Consensus 174 g~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~ 250 (453)
.++.++|+||.. .|.+++|+ ++.|++||.|++|+|||+.+.. ...+..|...+. .++|+|+|++
T Consensus 45 ~~~~~~l~gH~~--------~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~----~~~~s~~~~~- 111 (340)
T 1got_B 45 MRTRRTLRGHLA--------KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM----TCAYAPSGNY- 111 (340)
T ss_dssp CCEEEEECCCSS--------CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE----EEEECTTSSE-
T ss_pred chhheeecCCCC--------ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE----EEEECCCCCE-
Confidence 356789999765 68888885 6689999999999999987722 445555655543 4899999996
Q ss_pred eEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce-EEEEcCCcEEEEECCCCceEEE
Q 046773 251 VGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-AVACTSSRVITFDLRNQGMVLG 329 (453)
Q Consensus 251 ~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-~vas~d~tIrlWDl~t~~~~~~ 329 (453)
|++|+.|++|+|||+.+++. .......+.+|.+.|.++.|++++. ++++.|++|++||+++++++.+
T Consensus 112 --l~s~~~d~~v~iw~~~~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 112 --VACGGLDNICSIYNLKTREG----------NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp --EEEEETTCEEEEEETTTCSB----------SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred --EEEEeCCCeEEEEECccCCC----------cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEE
Confidence 88999999999999988641 0001145778999999999987664 5556789999999999988777
Q ss_pred EeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEE
Q 046773 330 ERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRV 408 (453)
Q Consensus 330 ~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrl 408 (453)
+.+|...+...+++|++..+++++.|+ +|+|||+.+++++.++..|...+..+.++|++.++++++. ++|+|
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~-------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~i 252 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDA-------SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCC-------cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 777877766667788888999999999 9999999999999999999988999999999999998887 99999
Q ss_pred EECCCCeEEEEeccc--CCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 409 WEVEGGEYMYSFRER--IGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 409 WD~~tG~~l~tL~gh--~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
||+.+++++.++..+ ... |. +|+||+++|++| .|++|+|||+.
T Consensus 253 wd~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 253 FDLRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp EETTTTEEEEEECCTTCCSC-EEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EECCCCcEEEEEccCCcccc-eEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 999999998887532 234 66 678999999999 99999999974
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.2e-31 Score=261.06 Aligned_cols=269 Identities=10% Similarity=0.167 Sum_probs=213.3
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEE---Eec--CCCCCccccccceEEEEEEc--CCeEEEE
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVR---TFR--PQHSDRLGQFSRAVSGIIIT--DSQLIFA 208 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~---tl~--gh~~~~~~~~s~~V~~i~f~--g~~Lasg 208 (453)
+|.++ |+|++|++ ++|++++ |++|+|||+.+++... ++. +|. ..|.+++|+ ++.|+++
T Consensus 49 ~h~~~----v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~ 115 (337)
T 1gxr_A 49 NHGEV----VCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD--------NYIRSCKLLPDGCTLIVG 115 (337)
T ss_dssp CCSSC----CCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT--------SBEEEEEECTTSSEEEEE
T ss_pred cCCCc----eEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCC--------CcEEEEEEcCCCCEEEEE
Confidence 68744 78999986 6999999 9999999999887433 333 333 267888886 6689999
Q ss_pred eCCCCEEEEEeecCC---cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCccee
Q 046773 209 TLDGDIHVAVIDDVA---NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVM 285 (453)
Q Consensus 209 S~D~tIkvWd~~~~g---~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~ 285 (453)
+.|++|++||+++.. ...+..|...+. .++|+|+++. |++++.|++|++||+++++..
T Consensus 116 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~----~~~~~~~~~~---l~~~~~dg~v~~~d~~~~~~~------------ 176 (337)
T 1gxr_A 116 GEASTLSIWDLAAPTPRIKAELTSSAPACY----ALAISPDSKV---CFSCCSDGNIAVWDLHNQTLV------------ 176 (337)
T ss_dssp ESSSEEEEEECCCC--EEEEEEECSSSCEE----EEEECTTSSE---EEEEETTSCEEEEETTTTEEE------------
T ss_pred cCCCcEEEEECCCCCcceeeecccCCCceE----EEEECCCCCE---EEEEeCCCcEEEEeCCCCcee------------
Confidence 999999999998722 122333433332 4899999986 789999999999999998743
Q ss_pred eeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcc
Q 046773 286 GWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRR 363 (453)
Q Consensus 286 ~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~ 363 (453)
..+.+|...+.+++++|++ +++++.|++|++||+++++++... .+.......+++++++.+++++.++
T Consensus 177 --~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~------- 246 (337)
T 1gxr_A 177 --RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESS------- 246 (337)
T ss_dssp --EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTS-------
T ss_pred --eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCC-------
Confidence 3456788899999999876 455567899999999998765554 3444555566778889999999999
Q ss_pred eEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEE
Q 046773 364 LAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAA 440 (453)
Q Consensus 364 ~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~las 440 (453)
.+++|+..+++. ..+..+...+..+.+++++.++++++. ++|++||+.+++++..+ .|... |. +|+||+++|++
T Consensus 247 ~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~-v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 247 NVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSS-VLSCDISVDDKYIVT 323 (337)
T ss_dssp CEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSC-EEEEEECTTSCEEEE
T ss_pred cEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCc-EEEEEECCCCCEEEE
Confidence 999999998765 356667778999999999999988887 99999999999988654 46666 76 67899999999
Q ss_pred E-eCCcEEEEec
Q 046773 441 S-CGTNIHLWDF 451 (453)
Q Consensus 441 g-~D~~IklWDl 451 (453)
+ .|++|+|||+
T Consensus 324 ~~~dg~i~iw~~ 335 (337)
T 1gxr_A 324 GSGDKKATVYEV 335 (337)
T ss_dssp EETTSCEEEEEE
T ss_pred ecCCCeEEEEEE
Confidence 9 9999999997
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=279.87 Aligned_cols=273 Identities=13% Similarity=0.095 Sum_probs=202.7
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCC---Ce---EEEEecCCCCCccccccceEEEEEEc--CCeE
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTT---RL---HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQL 205 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~t---g~---~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~L 205 (453)
.+|.++ |+|++|++ ++|||||.|++|||||+.+ ++ +..++. |.. .|.+++|+ ++.|
T Consensus 60 ~~h~~~----V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~--------~v~~~~~~~~~~~l 126 (437)
T 3gre_A 60 ENEPNS----ITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSS--------TVTQITMIPNFDAF 126 (437)
T ss_dssp TTTTSC----EEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSS--------CEEEEEECTTSSEE
T ss_pred cCCCCc----eEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCC--------CEEEEEEeCCCCEE
Confidence 478744 88999987 5999999999999999988 54 333432 332 68889885 5789
Q ss_pred EEEeCCCCEEEEEeec--CC--cceEEeeecc-e------ecC-ceEEE--EeCCCceeeEEEEeeCCCeEEEeeCCCCc
Q 046773 206 IFATLDGDIHVAVIDD--VA--NETRTAHFGS-V------MDD-GVLID--FTGCSRYWVGLYAGLAGRAFHIWDRQAEE 271 (453)
Q Consensus 206 asgS~D~tIkvWd~~~--~g--~~~~~~~~~~-v------~~~-~~~v~--Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~ 271 (453)
++|+.|++|+|||++. .+ ......|.-. + ..+ ...+. ++|++++ |++|+.|++|+|||+++++
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSL---LVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEE---EEEEETTSEEEEEETTTCC
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCE---EEEEeCCCeEEEEeCCCCe
Confidence 9999999999999952 13 2222322100 0 000 11233 5677875 8899999999999999988
Q ss_pred EEecccccCCcceeeeeeeee--eccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEe-eccCCeEEEEEE---
Q 046773 272 VFVGGDLTDHNTVMGWRMLTE--FTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGER-GYGRGLYVTSVD--- 343 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~--h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~-g~~~~~~v~~~~--- 343 (453)
.+ .++.+ |...|.+++|+|++ +++++.|++|++||+++++++.... .| ...|.++.
T Consensus 204 ~~--------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~ 267 (437)
T 3gre_A 204 RL--------------QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD--HAPITHVEVCQ 267 (437)
T ss_dssp EE--------------EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT--CEEEEEEEECT
T ss_pred ee--------------EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC--CCceEEEEecc
Confidence 43 23555 78899999999876 4556778999999999987766653 33 34566662
Q ss_pred ---ecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC--------------------------CCeeEEEEeeC
Q 046773 344 ---VNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA--------------------------DRNVNVMGCMN 394 (453)
Q Consensus 344 ---~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~--------------------------~~v~~~~~~~~ 394 (453)
+++..+++++.|+ +|+|||+.+++++..+..+. ..+..+.++ +
T Consensus 268 ~~s~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKT-------FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp TTCTTEEEEEEESTTE-------EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred ccCCCccEEEEEcCCC-------cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 2344788888888 99999999999988887542 225667777 6
Q ss_pred CCeEEEEeC-CeEEEEECCCCeEEEEecc-------------------------------------cCCceEE--EEecC
Q 046773 395 QGYALMCVE-GVIRVWEVEGGEYMYSFRE-------------------------------------RIGEEVI--AFVGD 434 (453)
Q Consensus 395 ~~~lls~s~-~tIrlWD~~tG~~l~tL~g-------------------------------------h~~~~V~--a~s~d 434 (453)
+.++++++. ++|++||+.++++++++.+ |.+. |+ ++.++
T Consensus 340 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-I~~i~~~~~ 418 (437)
T 3gre_A 340 DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDI-INSISTCEV 418 (437)
T ss_dssp TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCC-EEEEEEEES
T ss_pred ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccc-eeeEeeecc
Confidence 677777776 9999999999999998887 6667 87 45566
Q ss_pred --CCEEEEE-eCCcEEEEe
Q 046773 435 --DRHVAAS-CGTNIHLWD 450 (453)
Q Consensus 435 --~~~lasg-~D~~IklWD 450 (453)
+.+|+|| .||+|+||+
T Consensus 419 ~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 419 DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSSEEEEEEETTSCEEEEC
T ss_pred CCceEEEEEcCCceEEEeC
Confidence 6789999 999999995
No 47
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.3e-33 Score=271.84 Aligned_cols=274 Identities=12% Similarity=0.129 Sum_probs=208.0
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeC---CCcEEEEECCCCeEEEEec-CCCCCccccccceEEEEEEc-----CCe
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFA---DGAVRLFDLTTRLHVRTFR-PQHSDRLGQFSRAVSGIIIT-----DSQ 204 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~---D~TIrlWD~~tg~~~~tl~-gh~~~~~~~~s~~V~~i~f~-----g~~ 204 (453)
.||.++ |+|++|++ .+|++|+. |++|+|||+.++++..... +|.. .|.+++|+ +..
T Consensus 15 ~~h~~~----v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~~ 82 (357)
T 3i2n_A 15 KGFNYT----VFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAK--------PIKCGTFGATSLQQRY 82 (357)
T ss_dssp EECSSC----EEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESS--------CEEEEECTTCCTTTCC
T ss_pred cCCCCc----eEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccC--------cEEEEEEcCCCCCCce
Confidence 378854 89999987 36778887 9999999999998865544 3332 68889886 367
Q ss_pred EEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEE------EEeCCCceeeEEEEeeCCCeEEEeeCCCCc-EEec
Q 046773 205 LIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLI------DFTGCSRYWVGLYAGLAGRAFHIWDRQAEE-VFVG 275 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v------~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~-~~~g 275 (453)
|++|+.|++|++||+.+.. +..+..|...+. .+ +|+|+++. |++|+.|++|+|||+++++ ..
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~s~~~~~---l~~~~~d~~i~vwd~~~~~~~~-- 153 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN----AIDGIGGLGIGEGAPE---IVTGSRDGTVKVWDPRQKDDPV-- 153 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCSSCEE----EEEEESGGGCC-CCCE---EEEEETTSCEEEECTTSCSSCS--
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEEecccceE----EEeeccccccCCCccE---EEEEeCCCeEEEEeCCCCCCcc--
Confidence 9999999999999998722 345556666553 24 46889986 8899999999999999876 21
Q ss_pred ccccCCcceeeeeeeeee----ccceeEEE----EcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEe-
Q 046773 276 GDLTDHNTVMGWRMLTEF----TEFVGRVR----VTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDV- 344 (453)
Q Consensus 276 ~~l~~~~~v~~w~~l~~h----~~~v~~v~----~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~- 344 (453)
..+..| ...+.++. |++++ +++++.|++|++||++++++.. ...|...+...+++|
T Consensus 154 ------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 154 ------------ANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRK 220 (357)
T ss_dssp ------------EEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCS
T ss_pred ------------eeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCC
Confidence 112222 23677887 45554 4555667999999999987543 345555555566677
Q ss_pred --cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE-----ecCCCeeEEEEeeCCC-eEEEEeC-CeEEEEECCCC-
Q 046773 345 --NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS-----LRADRNVNVMGCMNQG-YALMCVE-GVIRVWEVEGG- 414 (453)
Q Consensus 345 --~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~-----~~~~~v~~~~~~~~~~-~lls~s~-~tIrlWD~~tG- 414 (453)
+++.+++++.|+ .++||++.+++++..+. .|...+..+.++|++. ++++++. ++|+|||+.++
T Consensus 221 ~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 221 DISMNKLVATSLEG-------KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp SSSCCEEEEEESTT-------EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCCCCEEEEECCCC-------eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 788999999999 99999998876554443 7778899999999888 5666666 99999999864
Q ss_pred ------------------eEEEEecccCCceEE--EEecCCCEEE-EE-eCCcEEEEecC
Q 046773 415 ------------------EYMYSFRERIGEEVI--AFVGDDRHVA-AS-CGTNIHLWDFG 452 (453)
Q Consensus 415 ------------------~~l~tL~gh~~~~V~--a~s~d~~~la-sg-~D~~IklWDl~ 452 (453)
+++.++.+|.+. |+ +|+||+++|+ ++ .|++|+|||+.
T Consensus 294 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 294 QRSKKDSEGIEMGVAGSVSLLQNVTLSTQP-ISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CC--CCTTSCCCCCCCEEEEEEEEECCSSC-EEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ccccccCCCCccccccccceeeccccCCCC-eeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 578899999988 87 6789999887 78 89999999985
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.7e-33 Score=279.92 Aligned_cols=269 Identities=16% Similarity=0.150 Sum_probs=210.3
Q ss_pred EEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCC--
Q 046773 148 RCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVA-- 223 (453)
Q Consensus 148 ~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g-- 223 (453)
++++|++ ++|++|+.|++|++||+.++++.+++.+|.. ..+..+.++++.|++|+.|++|+|||+.+ +
T Consensus 60 ~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~ 131 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADY-------TAVDTAKLQMRRFILGTTEGDIKVLDSNF-NLQ 131 (420)
T ss_dssp TTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCE-------EEEEEECSSSCEEEEEETTSCEEEECTTS-CEE
T ss_pred cceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCc-------eEEEEEecCCCEEEEEECCCCEEEEeCCC-cce
Confidence 4677765 7899999999999999999998887776421 12222344688999999999999999887 4
Q ss_pred cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEc
Q 046773 224 NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT 303 (453)
Q Consensus 224 ~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s 303 (453)
...+..|.+.+. .++|+|++++ |++|+.|++|+|||+++++.. ..+.+|...|.+++|+
T Consensus 132 ~~~~~~h~~~v~----~~~~~~~~~~---l~s~s~d~~i~iwd~~~~~~~--------------~~~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 132 REIDQAHVSEIT----KLKFFPSGEA---LISSSQDMQLKIWSVKDGSNP--------------RTLIGHRATVTDIAII 190 (420)
T ss_dssp EEETTSSSSCEE----EEEECTTSSE---EEEEETTSEEEEEETTTCCCC--------------EEEECCSSCEEEEEEE
T ss_pred eeecccccCccE----EEEECCCCCE---EEEEeCCCeEEEEeCCCCcCc--------------eEEcCCCCcEEEEEEc
Confidence 223335655543 4899999996 889999999999999988732 3467889999999999
Q ss_pred CCc--eEEEEcCCcEEEEECCCCceEEEEee---ccCCeEEEE---------------------EEecCCEEEEEeCCCc
Q 046773 304 SHE--SAVACTSSRVITFDLRNQGMVLGERG---YGRGLYVTS---------------------VDVNAEAYIVVENREL 357 (453)
Q Consensus 304 ~~~--~~vas~d~tIrlWDl~t~~~~~~~~g---~~~~~~v~~---------------------~~~~g~~l~s~s~dg~ 357 (453)
|++ +++++.|++|++||+++++++..... +...+...+ |+++++.+++++.|+
T Consensus 191 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg- 269 (420)
T 3vl1_A 191 DRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG- 269 (420)
T ss_dssp TTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-
T ss_pred CCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-
Confidence 876 45567789999999999887766543 222222222 245777899999999
Q ss_pred cccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEEeeCCC-eEEEEeC-CeEEEEECCCCeE-EEEecccCCceEE-EEe
Q 046773 358 ENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMGCMNQG-YALMCVE-GVIRVWEVEGGEY-MYSFRERIGEEVI-AFV 432 (453)
Q Consensus 358 ~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~~~~~~-~lls~s~-~tIrlWD~~tG~~-l~tL~gh~~~~V~-a~s 432 (453)
.++|||+.+++.+..+.. +...+..+.+++++. ++++++. ++|+|||+.++++ +.++.+|.+..|. .+.
T Consensus 270 ------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 343 (420)
T 3vl1_A 270 ------VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF 343 (420)
T ss_dssp ------CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE
T ss_pred ------eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe
Confidence 999999999987777643 556699999999988 7777777 9999999999865 7888886555477 445
Q ss_pred cCCCEEEEE-eCCcEEEEecC
Q 046773 433 GDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 433 ~d~~~lasg-~D~~IklWDl~ 452 (453)
+++++|+++ .|++|+|||+.
T Consensus 344 ~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 344 AAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp ETTEEEEEETTTEEEEEEEEC
T ss_pred CCCCEEEEecCCccEEEEecc
Confidence 788999999 99999999974
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9e-32 Score=273.38 Aligned_cols=276 Identities=12% Similarity=0.085 Sum_probs=220.2
Q ss_pred CCCCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 136 PSDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 136 ~~gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
..||. +.+++.+++|++..+++++.|++|+|||+.++++.+.+...|. ..|.+++|+ ++.|++|+.|++
T Consensus 87 ~~~~~--~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~-------~~v~~v~~s~~~~~l~~~~~dg~ 157 (401)
T 4aez_A 87 APGII--DDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDES-------TYVASVKWSHDGSFLSVGLGNGL 157 (401)
T ss_dssp CTTCC--CCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTT-------CCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCc--CCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCC-------CCEEEEEECCCCCEEEEECCCCe
Confidence 34787 5577889999998899999999999999999999988876333 268888885 678999999999
Q ss_pred EEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc-EEecccccCCcceeeeeeee
Q 046773 214 IHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE-VFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 214 IkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~-~~~g~~l~~~~~v~~w~~l~ 291 (453)
|+|||+.+.. +..+..|...+. .++|++ + .|++|+.|++|++||+++.. .. ..+.
T Consensus 158 i~iwd~~~~~~~~~~~~~~~~v~----~~~~~~--~---~l~~~~~dg~i~i~d~~~~~~~~--------------~~~~ 214 (401)
T 4aez_A 158 VDIYDVESQTKLRTMAGHQARVG----CLSWNR--H---VLSSGSRSGAIHHHDVRIANHQI--------------GTLQ 214 (401)
T ss_dssp EEEEETTTCCEEEEECCCSSCEE----EEEEET--T---EEEEEETTSEEEEEETTSSSCEE--------------EEEE
T ss_pred EEEEECcCCeEEEEecCCCCceE----EEEECC--C---EEEEEcCCCCEEEEecccCccee--------------eEEc
Confidence 9999998722 455556665543 477754 4 48899999999999998644 22 3467
Q ss_pred eeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCE-EEEEe--CCCccccCcceEE
Q 046773 292 EFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEA-YIVVE--NRELENQNRRLAI 366 (453)
Q Consensus 292 ~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~-l~s~s--~dg~~~~~~~~i~ 366 (453)
+|...|.++.|+|++ +++++.|++|++||++++.++....+|...+...++++++.. +++++ .|+ .++
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~-------~i~ 287 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK-------QIH 287 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC-------EEE
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC-------EEE
Confidence 888999999999876 455567899999999998877766666665555666676544 45544 577 999
Q ss_pred EEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEe--C-CeEEEEECCCCeEEE--EecccCCceEE--EEecCCCEEE
Q 046773 367 VRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCV--E-GVIRVWEVEGGEYMY--SFRERIGEEVI--AFVGDDRHVA 439 (453)
Q Consensus 367 Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s--~-~tIrlWD~~tG~~l~--tL~gh~~~~V~--a~s~d~~~la 439 (453)
+||+.+++++..+. +...+..+.+++++.++++++ . ++|+|||+.++++.. .+.+|.+. |. +|+||+++|+
T Consensus 288 i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~-v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 288 FWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR-VLYSALSPDGRILS 365 (401)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC-CCEEEECTTSSEEE
T ss_pred EEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC-EEEEEECCCCCEEE
Confidence 99999999988886 445689999999999998864 3 999999999976654 46789888 76 6789999999
Q ss_pred EE-eCCcEEEEecC
Q 046773 440 AS-CGTNIHLWDFG 452 (453)
Q Consensus 440 sg-~D~~IklWDl~ 452 (453)
++ .|++|+|||+.
T Consensus 366 s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 366 TAASDENLKFWRVY 379 (401)
T ss_dssp EECTTSEEEEEECC
T ss_pred EEeCCCcEEEEECC
Confidence 99 99999999984
No 50
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-33 Score=283.39 Aligned_cols=260 Identities=15% Similarity=0.131 Sum_probs=206.6
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCc
Q 046773 163 DGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDG 238 (453)
Q Consensus 163 D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~ 238 (453)
+.++..|+..+..|.++|.||.. .|.+++|+ ++.|+|||.|++|+|||+.+ + ..++..|...+.
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~--------~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~-~~~~~~~~~h~~~v~--- 112 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSG--------KVYSLDWTPEKNWIVSASQDGRLIVWNALT-SQKTHAIKLHCPWVM--- 112 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSS--------CEEEEEECTTSSCEEEEETTSEEEEEETTT-TEEEEEEECCCTTCC---
T ss_pred cccccccccceeEEeeccccccc--------EEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CccceEEecCCCCEE---
Confidence 34556788889999999999865 68888886 66899999999999999987 4 456667766554
Q ss_pred eEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCCc
Q 046773 239 VLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSR 315 (453)
Q Consensus 239 ~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~t 315 (453)
.++|+|+|++ |++|+.|++|+|||+.+.....+ .....+.+.+|.+.|.+++|.|+. ++++|.|++
T Consensus 113 -~~~~s~~g~~---las~~~d~~v~iw~~~~~~~~~~-------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~ 181 (380)
T 3iz6_a 113 -ECAFAPNGQS---VACGGLDSACSIFNLSSQADRDG-------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT 181 (380)
T ss_dssp -CCEECTTSSE---EEECCSSSCCEEEECCCCSSCCC-------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC
T ss_pred -EEEECCCCCE---EEEeeCCCcEEEEECCCCccccC-------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCc
Confidence 3799999996 88999999999999987541100 001114577999999999998742 566677899
Q ss_pred EEEEECCCCceEEEE-----eeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcC-CCeeEEEEEecCCCeeE
Q 046773 316 VITFDLRNQGMVLGE-----RGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVD-TFEEVCRFSLRADRNVN 388 (453)
Q Consensus 316 IrlWDl~t~~~~~~~-----~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~l~~~~~~v~~ 388 (453)
|++||+++++++... .+|...+...++.+ +++.+++++.|+ +|+|||+. +++++..+..|...|..
T Consensus 182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-------~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-------TVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-------CEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-------eEEEEECCCCCcceEEECCcCCCeEE
Confidence 999999999887654 34544443334433 678999999999 99999997 45788888889888999
Q ss_pred EEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCc------eEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 389 VMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGE------EVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 389 ~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~------~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+.++|++.++++++. ++|||||+.+++++.++..+... .|. +|+|++++|++| .|++|+|||+.
T Consensus 255 v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 999999999998887 99999999999999998765321 143 788999999999 99999999963
No 51
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-31 Score=262.36 Aligned_cols=239 Identities=14% Similarity=0.186 Sum_probs=196.2
Q ss_pred eEEEEecCCCCCccccccceEEEEEEcC---CeEEEEeCCCCEEEEEeecC----C--cceEEeeecceecCceEEEEeC
Q 046773 175 LHVRTFRPQHSDRLGQFSRAVSGIIITD---SQLIFATLDGDIHVAVIDDV----A--NETRTAHFGSVMDDGVLIDFTG 245 (453)
Q Consensus 175 ~~~~tl~gh~~~~~~~~s~~V~~i~f~g---~~LasgS~D~tIkvWd~~~~----g--~~~~~~~~~~v~~~~~~v~Fs~ 245 (453)
.+..+|.||.. .|.+++|++ +.|+|||.|++|++|++... + +.++.+|...+. .++|+|
T Consensus 8 ~l~~~l~gH~~--------~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~----~~~~s~ 75 (319)
T 3frx_A 8 VLRGTLEGHNG--------WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ----DCTLTA 75 (319)
T ss_dssp EEEEEECCCSS--------CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE----EEEECT
T ss_pred EEEEEEccccc--------eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE----EEEECC
Confidence 45678998765 688899863 68999999999999998752 1 245566766554 489999
Q ss_pred CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCC
Q 046773 246 CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRN 323 (453)
Q Consensus 246 dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t 323 (453)
||++ |+|||.|++|||||+++++.+ ..+.+|...|.+++|+|++ +++++.|++|||||++.
T Consensus 76 dg~~---l~s~s~D~~v~~wd~~~~~~~--------------~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 76 DGAY---ALSASWDKTLRLWDVATGETY--------------QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp TSSE---EEEEETTSEEEEEETTTTEEE--------------EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred CCCE---EEEEeCCCEEEEEECCCCCee--------------EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 9996 889999999999999999854 3567899999999999876 45567789999999974
Q ss_pred CceEEEEeeccCCeEEEEEEec------CCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCe
Q 046773 324 QGMVLGERGYGRGLYVTSVDVN------AEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGY 397 (453)
Q Consensus 324 ~~~~~~~~g~~~~~~v~~~~~~------g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~ 397 (453)
+++.++.+|...+....+.|. +..+++++.|+ +|++||+.+++....+..|...+..+.++|++.+
T Consensus 139 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~-------~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 139 -QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK-------MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp -CEEEEECCCSSCEEEEEECCC------CCEEEEEETTS-------CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSE
T ss_pred -CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCC-------EEEEEECCcchhheeecCCCCcEEEEEEcCCCCE
Confidence 566666677655544444442 34789999999 9999999999998889899888999999999999
Q ss_pred EEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 398 ALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 398 lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
+++++. ++|+|||+.++++++++..+ +. |. +|+||+.+|+++.+..|++|++.
T Consensus 211 l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~-v~~~~~sp~~~~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 211 IASAGKDGEIMLWNLAAKKAMYTLSAQ-DE-VFSLAFSPNRYWLAAATATGIKVFSLD 266 (319)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEEECC-SC-EEEEEECSSSSEEEEEETTEEEEEEET
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCC-Cc-EEEEEEcCCCCEEEEEcCCCcEEEEeC
Confidence 998887 99999999999999999865 44 55 78899999998877789999874
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-32 Score=270.78 Aligned_cols=276 Identities=9% Similarity=0.087 Sum_probs=213.1
Q ss_pred EEEEEecC--C-EEEEEeCCCcEEEEEC----CCCe------EEEEecCCCCC--ccccccceEEEEEEc--CCeEEEEe
Q 046773 147 CRCLTLSD--L-YLACGFADGAVRLFDL----TTRL------HVRTFRPQHSD--RLGQFSRAVSGIIIT--DSQLIFAT 209 (453)
Q Consensus 147 v~~lafs~--~-~LaSGS~D~TIrlWD~----~tg~------~~~tl~gh~~~--~~~~~s~~V~~i~f~--g~~LasgS 209 (453)
|+|++|++ + +||+|+.|++|+|||+ .+++ ....+...... ....+...|.+++|+ ++.|++|+
T Consensus 48 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp CSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 78999986 4 9999999999999999 9998 45555421000 000012368888886 67899999
Q ss_pred CCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeee
Q 046773 210 LDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRM 289 (453)
Q Consensus 210 ~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~ 289 (453)
.|++|+|||....-+..+..|...+. .++|+|++++ |++++.|++|++||+++++... .
T Consensus 128 ~dg~i~i~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~~--------------~ 186 (425)
T 1r5m_A 128 ENGELRLWNKTGALLNVLNFHRAPIV----SVKWNKDGTH---IISMDVENVTILWNVISGTVMQ--------------H 186 (425)
T ss_dssp TTSCEEEEETTSCEEEEECCCCSCEE----EEEECTTSSE---EEEEETTCCEEEEETTTTEEEE--------------E
T ss_pred CCCeEEEEeCCCCeeeeccCCCccEE----EEEECCCCCE---EEEEecCCeEEEEECCCCcEEE--------------E
Confidence 99999999943311455555655543 4899999996 7899999999999999988431 1
Q ss_pred eeeeccc---------------eeEEEEcCCceEEE-EcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe
Q 046773 290 LTEFTEF---------------VGRVRVTSHESAVA-CTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE 353 (453)
Q Consensus 290 l~~h~~~---------------v~~v~~s~~~~~va-s~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s 353 (453)
+..+... +.++.+++++.+++ +.++.|++||+++++.+....+|...+...+++++++.+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence 2222222 77888887776554 5578999999999876666666766666677888889999999
Q ss_pred CCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--E
Q 046773 354 NRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--A 430 (453)
Q Consensus 354 ~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a 430 (453)
.|+ .++||++.+++++..+..+...+..+.+++++ ++++++. ++|++||+.+++++..+.+|... |. +
T Consensus 267 ~d~-------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~ 337 (425)
T 1r5m_A 267 DDG-------TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-IFAGR 337 (425)
T ss_dssp TTS-------CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-EEEEE
T ss_pred CCC-------EEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-EEEEE
Confidence 999 99999999999888888888889999999988 7777776 99999999999999999999888 77 6
Q ss_pred EecCCCEEEEE-eCCcEEEEecC
Q 046773 431 FVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 431 ~s~d~~~lasg-~D~~IklWDl~ 452 (453)
|+|++++|+++ .|+.|+|||+.
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECH
T ss_pred EcCCCCEEEEEECCCeEEEEECC
Confidence 78999999999 99999999973
No 53
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-32 Score=272.33 Aligned_cols=252 Identities=11% Similarity=0.058 Sum_probs=185.3
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCe--EEEEecCCCCCccccccceEEEEEEc----CCeEEEE
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRL--HVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLIFA 208 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~--~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~Lasg 208 (453)
.||.++ |+|++|++ ++|||||.|++|||||+.+++ ++.+|.+|.. .|.+++|+ +..|+||
T Consensus 10 ~~H~~~----V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~--------~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 10 TSHEDM----IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEG--------PVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp ----CC----EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSS--------CEEEEEECCGGGSSCEEEE
T ss_pred ccccCe----EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc--------cEEEEEeCCCCCCCEEEEE
Confidence 389855 88999975 799999999999999999885 5788998764 68889984 6789999
Q ss_pred eCCCCEEEEEeecCC----cceEEeeecceecCceEEEEeCC--CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCc
Q 046773 209 TLDGDIHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGC--SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 209 S~D~tIkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~d--g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
|.|++|+|||+++ + ...+.+|...|. .|+|+|+ |.+ |++|+.|++|+|||++++....
T Consensus 78 s~D~~v~iWd~~~-~~~~~~~~~~~h~~~V~----~v~~~p~~~g~~---lasgs~D~~i~lwd~~~~~~~~-------- 141 (316)
T 3bg1_A 78 SYDRKVIIWREEN-GTWEKSHEHAGHDSSVN----SVCWAPHDYGLI---LACGSSDGAISLLTYTGEGQWE-------- 141 (316)
T ss_dssp ETTSCEEEECCSS-SCCCEEEEECCCSSCCC----EEEECCTTTCSC---EEEECSSSCEEEEEECSSSCEE--------
T ss_pred ECCCEEEEEECCC-CcceEEEEccCCCCceE----EEEECCCCCCcE---EEEEcCCCCEEEEecCCCCCcc--------
Confidence 9999999999987 3 223445655543 5899998 665 8899999999999998764210
Q ss_pred ceeeeeeeeeeccceeEEEEcCC-------------------ceEEEEcCCcEEEEECCCCc---eEEEEeeccCCeEEE
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSH-------------------ESAVACTSSRVITFDLRNQG---MVLGERGYGRGLYVT 340 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~-------------------~~~vas~d~tIrlWDl~t~~---~~~~~~g~~~~~~v~ 340 (453)
....+.+|...|.++.|+|+ .+++++.|++|||||+++++ ++..+.+|...+...
T Consensus 142 ---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 142 ---VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp ---ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE
T ss_pred ---eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE
Confidence 01235578888999999875 24555678999999998653 334456676555444
Q ss_pred EEEecC----CEEEEEeCCCccccCcceEEEEEcCCC---e-eEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEEC
Q 046773 341 SVDVNA----EAYIVVENRELENQNRRLAIVRRVDTF---E-EVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEV 411 (453)
Q Consensus 341 ~~~~~g----~~l~s~s~dg~~~~~~~~i~Iw~~~tg---~-~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~ 411 (453)
+|+|++ ..+++++.|+ +|+||+.+++ + ....+..+.+.+..+.++|++.++++++. ++|+|||.
T Consensus 219 ~~sp~~~~~~~~las~s~D~-------~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 219 AWAPSIGLPTSTIASCSQDG-------RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp ECCCCSSCSCCEEEEEETTC-------EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred EecCCCCCCCceEEEEcCCC-------eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 555654 6799999999 9999998863 1 22334556778999999999999998887 99999998
Q ss_pred C-CC--eEEEEecccCCc
Q 046773 412 E-GG--EYMYSFRERIGE 426 (453)
Q Consensus 412 ~-tG--~~l~tL~gh~~~ 426 (453)
. .| +|+.++....+.
T Consensus 292 ~~~g~~~~~~~~~~~~~~ 309 (316)
T 3bg1_A 292 SVDGQWVCISDVNKGQGS 309 (316)
T ss_dssp CTTSCEEEEEECC-----
T ss_pred CCCCcEEEeeeccCCCCc
Confidence 6 33 566666655444
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=263.44 Aligned_cols=271 Identities=13% Similarity=0.133 Sum_probs=213.7
Q ss_pred CCCCCCCCeEEEEEEecC-----CEEEEEeCCCcEEEEECCC-CeEE-EEecCCCCCccccccceEEEEEEc--CCeEEE
Q 046773 137 SDVDNPDGLTCRCLTLSD-----LYLACGFADGAVRLFDLTT-RLHV-RTFRPQHSDRLGQFSRAVSGIIIT--DSQLIF 207 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~-----~~LaSGS~D~TIrlWD~~t-g~~~-~tl~gh~~~~~~~~s~~V~~i~f~--g~~Las 207 (453)
.+|.++ |+|++|++ ++||+|+.|++|+|||+.+ ++++ +++.+|.. .|.+++|+ ++.|++
T Consensus 36 ~~h~~~----v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 36 SSPDDS----IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG--------PVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SCCSSC----EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSS--------CEEEEEECTTSSEEEE
T ss_pred cCCCCc----eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccC--------CEEEEEECcCCCEEEE
Confidence 489854 89999986 5899999999999999998 6665 77887654 68888885 678999
Q ss_pred EeCCCCEEEEEeecCC-cceEEeeecceecCceEEEE--eCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcce
Q 046773 208 ATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDF--TGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTV 284 (453)
Q Consensus 208 gS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~F--s~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v 284 (453)
|+.|++|+|||+++ + ...+..|...+. .++| +|++++ |++|+.|++|+|||+++++.+
T Consensus 104 ~~~dg~v~iwd~~~-~~~~~~~~~~~~v~----~~~~~~~~~~~~---l~~~~~dg~i~vwd~~~~~~~----------- 164 (368)
T 3mmy_A 104 ASCDKTAKMWDLSS-NQAIQIAQHDAPVK----TIHWIKAPNYSC---VMTGSWDKTLKFWDTRSSNPM----------- 164 (368)
T ss_dssp EETTSEEEEEETTT-TEEEEEEECSSCEE----EEEEEECSSCEE---EEEEETTSEEEEECSSCSSCS-----------
T ss_pred EcCCCcEEEEEcCC-CCceeeccccCceE----EEEEEeCCCCCE---EEEccCCCcEEEEECCCCcEE-----------
Confidence 99999999999987 4 333445655543 4788 899885 889999999999999998732
Q ss_pred eeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEE--eeccCCeEEEEEEecCCE----EEEEeCCCcc
Q 046773 285 MGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGE--RGYGRGLYVTSVDVNAEA----YIVVENRELE 358 (453)
Q Consensus 285 ~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~--~g~~~~~~v~~~~~~g~~----l~s~s~dg~~ 358 (453)
..+..+ ..+.++.+.+...++++.++.+++||++........ ..+.+...+.++.+++.. +++++.|+
T Consensus 165 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-- 238 (368)
T 3mmy_A 165 ---MVLQLP-ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG-- 238 (368)
T ss_dssp ---EEEECS-SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS--
T ss_pred ---EEEecC-CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC--
Confidence 112222 356667777777888888999999999987554332 334455666777666554 99999999
Q ss_pred ccCcceEEEEEcCCC---eeEEEEEecCC------------CeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecc
Q 046773 359 NQNRRLAIVRRVDTF---EEVCRFSLRAD------------RNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRE 422 (453)
Q Consensus 359 ~~~~~~i~Iw~~~tg---~~v~~l~~~~~------------~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~g 422 (453)
.++||++++. +.+..+..|.. .+..+.++|++.++++++. ++|+|||+.+++++.++.+
T Consensus 239 -----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 239 -----RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp -----EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred -----cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC
Confidence 9999999987 55666766654 5889999999999998887 9999999999999999999
Q ss_pred cCCceEE--EEecCCCEEEEE-eCCcEEEEe
Q 046773 423 RIGEEVI--AFVGDDRHVAAS-CGTNIHLWD 450 (453)
Q Consensus 423 h~~~~V~--a~s~d~~~lasg-~D~~IklWD 450 (453)
|.+. |+ +|+||+++|+++ .|+..+.|+
T Consensus 314 ~~~~-v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 314 LDQP-ISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CSSC-EEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred CCCC-ceEEEECCCCCeEEEEeccccccccc
Confidence 9988 87 678999999998 776555444
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-31 Score=270.15 Aligned_cols=280 Identities=13% Similarity=0.083 Sum_probs=205.0
Q ss_pred EEEEec--CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC
Q 046773 148 RCLTLS--DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA 223 (453)
Q Consensus 148 ~~lafs--~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g 223 (453)
.+..|+ +++||+|+.|++|+|||+.++++++.+.+|.. .|.+++|+ ++.|++|+.|++|++||+.+..
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVS--------EITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSS--------CEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccC--------ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 344454 57999999999999999999999999888754 68888885 6689999999999999998722
Q ss_pred -cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEE---ecccccCCcceeeeee--------ee
Q 046773 224 -NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVF---VGGDLTDHNTVMGWRM--------LT 291 (453)
Q Consensus 224 -~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~---~g~~l~~~~~v~~w~~--------l~ 291 (453)
+..+.+|.+.+. .++|+|++++ |++|+.|++|+|||+++++.. .++... ...+..... ..
T Consensus 173 ~~~~~~~h~~~v~----~~~~~~~~~~---l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 173 NPRTLIGHRATVT----DIAIIDRGRN---VLSASLDGTIRLWECGTGTTIHTFNRKENP-HDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp CCEEEECCSSCEE----EEEEETTTTE---EEEEETTSCEEEEETTTTEEEEEECBTTBT-TCCEEEEEEEECCCSSCGG
T ss_pred CceEEcCCCCcEE----EEEEcCCCCE---EEEEcCCCcEEEeECCCCceeEEeecCCCC-CCCccEEEEecCCcceeee
Confidence 566777776654 4899999986 889999999999999998832 221100 000100000 01
Q ss_pred eeccceeEEEEcCCce--EEEEcCCcEEEEECCCCceEEEE-eeccCCeEEEEEEecCC-EEEEEeCCCccccCcceEEE
Q 046773 292 EFTEFVGRVRVTSHES--AVACTSSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAE-AYIVVENRELENQNRRLAIV 367 (453)
Q Consensus 292 ~h~~~v~~v~~s~~~~--~vas~d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~-~l~s~s~dg~~~~~~~~i~I 367 (453)
.+...+.+++|+|++. ++++.|++|++||+++++.+... .+|...+...++++++. .+++++.|+ .++|
T Consensus 245 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-------~i~v 317 (420)
T 3vl1_A 245 ISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-------MLAQ 317 (420)
T ss_dssp GCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-------EEEE
T ss_pred cccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-------eEEE
Confidence 1235556666777763 44567899999999998876665 44555555556677777 899999999 9999
Q ss_pred EEcCCCee-EEEEEecC-CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC---------eEEEEecccCCceEE--EEec
Q 046773 368 RRVDTFEE-VCRFSLRA-DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG---------EYMYSFRERIGEEVI--AFVG 433 (453)
Q Consensus 368 w~~~tg~~-v~~l~~~~-~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG---------~~l~tL~gh~~~~V~--a~s~ 433 (453)
||+.++++ +..+..+. ..+..+ ++++++++++++. ++|+|||+.+. .....+.+|.+. |. +|+|
T Consensus 318 wd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~ 395 (420)
T 3vl1_A 318 WDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDA-VSQFCYVS 395 (420)
T ss_dssp EETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCC-CCEEEEEC
T ss_pred EEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcc-eEEEEEcc
Confidence 99998754 77777744 435554 5667778777776 99999999873 223345567666 65 7789
Q ss_pred CCC----EEEEEeCCcEEEEecC
Q 046773 434 DDR----HVAASCGTNIHLWDFG 452 (453)
Q Consensus 434 d~~----~lasg~D~~IklWDl~ 452 (453)
|+. .+++|.++.+++|++.
T Consensus 396 ~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 396 DDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp CSSSSCEEEEEETTTEEEEEESC
T ss_pred CCCCcceEEEEcCCceEEEEecc
Confidence 998 4555599999999985
No 56
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=265.34 Aligned_cols=249 Identities=9% Similarity=0.032 Sum_probs=187.6
Q ss_pred CCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCc---ceE-Ee-eecceecCceEEEEeCC
Q 046773 172 TTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVAN---ETR-TA-HFGSVMDDGVLIDFTGC 246 (453)
Q Consensus 172 ~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~---~~~-~~-~~~~v~~~~~~v~Fs~d 246 (453)
.+.+++++|.+|.. .|.+++|+++.||+||.|++|+|||+..... .++ .. |.+.|. .|+|+|+
T Consensus 2 ~~~~~~~~~~~h~~--------~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~----~v~~sp~ 69 (330)
T 2hes_X 2 ASINLIKSLKLYKE--------KIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR----SVAWRPH 69 (330)
T ss_dssp -CCEEEEEEECCSS--------CEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE----EEEECTT
T ss_pred cccccceeeccCCC--------ceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE----EEEECCC
Confidence 46788999998765 6889999999999999999999999976211 222 12 554443 5899999
Q ss_pred CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCC
Q 046773 247 SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQ 324 (453)
Q Consensus 247 g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~ 324 (453)
|++ |++||.|++|+|||++.+..-. .......++.+|.+.|.+|+|+|++ +++++.|++|+|||+++.
T Consensus 70 ~~~---las~s~D~~v~iw~~~~~~~~~-------~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 70 TSL---LAAGSFDSTVSIWAKEESADRT-------FEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp SSE---EEEEETTSCEEEEEC--------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CCE---EEEEeCCCcEEEEEcccCcCcc-------ccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 986 8899999999999996532100 0011124678999999999999876 455567899999999532
Q ss_pred ----ceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCC--eeEEEEEecCCCeeEEEEeeC--CC
Q 046773 325 ----GMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTF--EEVCRFSLRADRNVNVMGCMN--QG 396 (453)
Q Consensus 325 ----~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg--~~v~~l~~~~~~v~~~~~~~~--~~ 396 (453)
+++..+.+|...+...+|+|+++.+++++.|+ +|+||+..++ +++..+..|...|..+.++++ +.
T Consensus 140 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-------~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 140 GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-------TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-------eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 34455567776666667788899999999999 9999998876 678888889888999999997 55
Q ss_pred eEEEEeC-CeEEEEECCCC--------eEEEEecc-cCCceEE--EEecCCCEEEEE-eCCcEEEEec
Q 046773 397 YALMCVE-GVIRVWEVEGG--------EYMYSFRE-RIGEEVI--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 397 ~lls~s~-~tIrlWD~~tG--------~~l~tL~g-h~~~~V~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
++++++. ++|||||+.++ +++.++.+ |... |+ +|++++ .|+++ .|++|+|||+
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ-VYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSC-EEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccc-eEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 7777776 99999999876 67778876 8777 88 455555 67777 9999999986
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-31 Score=307.53 Aligned_cols=276 Identities=16% Similarity=0.162 Sum_probs=220.5
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCC
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDG 212 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~ 212 (453)
.||.++ |+|++|++ ++||||+.|++|+|||+.++++++++.+|.. .|.+++|+ ++.|++|+.|+
T Consensus 612 ~~h~~~----v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~--------~v~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 612 RPHTDA----VYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED--------EVLCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp CCCSSC----EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEEEEEECTTSSEEEEEETTS
T ss_pred eccccc----EEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC--------CEEEEEEecCCCEEEEEeCCC
Confidence 389844 88999986 6999999999999999999999999998764 68888885 67899999999
Q ss_pred CEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeee
Q 046773 213 DIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRML 290 (453)
Q Consensus 213 tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l 290 (453)
+|+|||+.+ + +.++.+|...+. .++|+|++... .|++|+.|++|+|||++++++. .++
T Consensus 680 ~v~vwd~~~-~~~~~~~~~~~~~v~----~~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~--------------~~~ 739 (1249)
T 3sfz_A 680 KVKIWDSAT-GKLVHTYDEHSEQVN----CCHFTNKSNHL-LLATGSNDFFLKLWDLNQKECR--------------NTM 739 (1249)
T ss_dssp EEEEEETTT-CCEEEEEECCSSCEE----EEEECSSSSCC-EEEEEETTSCEEEEETTSSSEE--------------EEE
T ss_pred eEEEEECCC-CceEEEEcCCCCcEE----EEEEecCCCce-EEEEEeCCCeEEEEECCCcchh--------------hee
Confidence 999999987 5 456666766554 48999975532 4889999999999999998853 346
Q ss_pred eeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEE--------------------------------------
Q 046773 291 TEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGE-------------------------------------- 330 (453)
Q Consensus 291 ~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~-------------------------------------- 330 (453)
.+|.++|.+++|+|++ +++++.|++|++||++++++....
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 6888999999999876 455567889999999877544322
Q ss_pred -----------------eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEee
Q 046773 331 -----------------RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCM 393 (453)
Q Consensus 331 -----------------~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~ 393 (453)
.+|...+...+|++++..+++++.++ +++||++++++++..+..|...+..+.+++
T Consensus 820 ~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg-------~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQY-------CVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp EEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSS-------CEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred cEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCC-------eEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 13333444556778889999999999 999999999999988888888888888888
Q ss_pred CCCeEEEEeC-CeEEEEEC-------------------------------------------------------------
Q 046773 394 NQGYALMCVE-GVIRVWEV------------------------------------------------------------- 411 (453)
Q Consensus 394 ~~~~lls~s~-~tIrlWD~------------------------------------------------------------- 411 (453)
++.++++++. ++|++||+
T Consensus 893 dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 893 DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 8887777765 77777764
Q ss_pred ------------------CCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 412 ------------------EGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 412 ------------------~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+++++.++.+|.+. |. +|+||+++|+++ .|++|++||+.
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA-VRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCCSSC-CCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccCCCc-eEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 345566667778777 66 677888888888 88999999864
No 58
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-31 Score=260.95 Aligned_cols=266 Identities=12% Similarity=0.066 Sum_probs=214.1
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCe---EEEEecCCCCCccccccceEEEEEE--cCC-eEEEE
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRL---HVRTFRPQHSDRLGQFSRAVSGIII--TDS-QLIFA 208 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~---~~~tl~gh~~~~~~~~s~~V~~i~f--~g~-~Lasg 208 (453)
.+|.++ |+|++|++ ++||+|+.|++|+|||+.+++ .++.+.+|.. .|.+++| ++. .|++|
T Consensus 8 ~~h~~~----v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 8 QAPKDY----ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH--------PLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp SCCSSC----EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS--------CEEEEEEEESSSEEEEEE
T ss_pred cCCCCc----EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCC--------ceEEEEECCCCCcEEEEE
Confidence 378744 88999975 699999999999999999988 3455555543 5777776 477 89999
Q ss_pred eCCCCEEEEEe-ecCCcceEEe--eecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCC---------CcEEecc
Q 046773 209 TLDGDIHVAVI-DDVANETRTA--HFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQA---------EEVFVGG 276 (453)
Q Consensus 209 S~D~tIkvWd~-~~~g~~~~~~--~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~t---------g~~~~g~ 276 (453)
+.|++|++||+ ++.....+.. |...+. .++|+| ++. |++++.|++|++||+++ ++.+
T Consensus 76 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~----~l~~~~-~~~---l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--- 144 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSFQALTNNEANLGIC----RICKYG-DDK---LIAASWDGLIEVIDPRNYGDGVIAVKNLNS--- 144 (342)
T ss_dssp ETTSCEEEECSSSSSSEEECBSCCCCSCEE----EEEEET-TTE---EEEEETTSEEEEECHHHHTTBCEEEEESCS---
T ss_pred cCCCeEEEEEeccCCceEeccccCCCCceE----EEEeCC-CCE---EEEEcCCCeEEEEcccccccccccccCCee---
Confidence 99999999999 7622444555 655543 489999 775 88999999999999987 4421
Q ss_pred cccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCC-CceEE--EEeeccCCeEEEEEEe-cCCEEEEE
Q 046773 277 DLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRN-QGMVL--GERGYGRGLYVTSVDV-NAEAYIVV 352 (453)
Q Consensus 277 ~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t-~~~~~--~~~g~~~~~~v~~~~~-~g~~l~s~ 352 (453)
.++. |...|.+++++|+.+++++.+++|++||+++ +.... ....|...+...++++ +++.++++
T Consensus 145 -----------~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 145 -----------NNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp -----------SSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred -----------eEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 1233 6788999999999988888899999999998 65322 2234444555556777 88999999
Q ss_pred eCCCccccCcceEEEEEcCCC------eeEEEEEecCC---------CeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeE
Q 046773 353 ENRELENQNRRLAIVRRVDTF------EEVCRFSLRAD---------RNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEY 416 (453)
Q Consensus 353 s~dg~~~~~~~~i~Iw~~~tg------~~v~~l~~~~~---------~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~ 416 (453)
+.++ .++||+++.. +.+..+..+.. .+..+.+++++.++++++. ++|+|||+.++++
T Consensus 213 ~~dg-------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 213 SIDG-------RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp ETTS-------EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ecCC-------cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 9999 9999999887 77888887754 7899999999999998887 9999999999999
Q ss_pred EEEeccc-CCceEEEEecCCCEEEEE-eCCc
Q 046773 417 MYSFRER-IGEEVIAFVGDDRHVAAS-CGTN 445 (453)
Q Consensus 417 l~tL~gh-~~~~V~a~s~d~~~lasg-~D~~ 445 (453)
+.++.+| .+. |.+++||+++|+++ .|++
T Consensus 286 ~~~~~~~h~~~-v~~~~~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 286 IKNFAKFNEDS-VVKIACSDNILCLATSDDT 315 (342)
T ss_dssp EEECCCCSSSE-EEEEEECSSEEEEEEECTH
T ss_pred hhhhhcccCCC-ceEecCCCCeEEEEecCCc
Confidence 9999998 777 99777999999999 9998
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.7e-33 Score=278.63 Aligned_cols=232 Identities=9% Similarity=0.035 Sum_probs=175.2
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCC--eEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEee
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTR--LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVID 220 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg--~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~ 220 (453)
|+|++|++ ++||+|+.|++|+|||+.++ +++++|.+|.. .|.+++|+ ++.|++||.|++|+|||+.
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~--------~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK--------IVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS--------CEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc--------eEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 78999985 69999999999999999999 88999988754 58888886 5789999999999999998
Q ss_pred cCC----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeee-ecc
Q 046773 221 DVA----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTE-FTE 295 (453)
Q Consensus 221 ~~g----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~-h~~ 295 (453)
+.. ...+..|...+. .++|+|++++ |++|+.|++|+|||+++++.+. ....+.+ |..
T Consensus 86 ~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~~-----------~~~~~~~~h~~ 147 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAAT----FVRWSPNEDK---FAVGSGARVISVCYFEQENDWW-----------VSKHLKRPLRS 147 (377)
T ss_dssp ---CCCCEEECCCCSSCEE----EEECCTTSSC---CEEEESSSCEEECCC-----CC-----------CCEEECSSCCS
T ss_pred CCCceeeeeEecccCCceE----EEEECCCCCE---EEEEecCCeEEEEEECCcccce-----------eeeEeecccCC
Confidence 722 122334554443 4899999996 7899999999999999876210 0134556 889
Q ss_pred ceeEEEEcCCc--eEEEEcCCcEEEEECCC------------------CceEEEEeeccCCeEEEEEEecCCEEEEEeCC
Q 046773 296 FVGRVRVTSHE--SAVACTSSRVITFDLRN------------------QGMVLGERGYGRGLYVTSVDVNAEAYIVVENR 355 (453)
Q Consensus 296 ~v~~v~~s~~~--~~vas~d~tIrlWDl~t------------------~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~d 355 (453)
.|.+++|+|++ +++++.|++|++||+++ ++++..+ +|...+...+|+|+++.+++++.|
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC
Confidence 99999999876 45556789999999963 3333334 666666666778888999999999
Q ss_pred CccccCcceEEEEEcCCCee----EEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECC
Q 046773 356 ELENQNRRLAIVRRVDTFEE----VCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVE 412 (453)
Q Consensus 356 g~~~~~~~~i~Iw~~~tg~~----v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~ 412 (453)
+ +|+||++.++++ +..+..|...+..+.+++++.++++++++.+.+|+..
T Consensus 227 ~-------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 227 S-------SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp T-------EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred C-------cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 9 999999999887 7788888888999999999988887777444477665
No 60
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.2e-31 Score=289.83 Aligned_cols=275 Identities=13% Similarity=0.151 Sum_probs=228.4
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
||.++ |.|++|++ ++||+|+.|++|+|||+.++++++++.+|.. .|.+++|+ ++.|++|+.|++
T Consensus 11 ~h~~~----v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~--------~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 11 NRSDR----VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET--------PVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp EECSC----EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--------CEEEEEEEGGGTEEEEEETTSE
T ss_pred cCCCc----eEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCC--------cEEEEEEeCCCCEEEEEeCCCe
Confidence 78744 88999986 6999999999999999999999999998754 57778775 678999999999
Q ss_pred EEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeee
Q 046773 214 IHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTE 292 (453)
Q Consensus 214 IkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~ 292 (453)
|+|||+.+.. +..+..|.+.+. .++|+|+|++ |++|+.|++|+|||++++.... ..+.+
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~----~~~~s~~~~~---l~~~~~dg~i~vw~~~~~~~~~-------------~~~~~ 138 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIR----SIAVHPTKPY---VLSGSDDLTVKLWNWENNWALE-------------QTFEG 138 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEE----EEEECSSSSE---EEEEETTSEEEEEEGGGTSEEE-------------EEEEC
T ss_pred EEEEECCCCcEEEEEecCCCCEE----EEEEeCCCCE---EEEEcCCCEEEEEECCCCceEE-------------EEEcC
Confidence 9999998722 455666766554 4899999996 7899999999999998874221 34667
Q ss_pred eccceeEEEEcC-Cc--eEEEEcCCcEEEEECCCCceEEEEe-eccCCeEEEEEEe--cCCEEEEEeCCCccccCcceEE
Q 046773 293 FTEFVGRVRVTS-HE--SAVACTSSRVITFDLRNQGMVLGER-GYGRGLYVTSVDV--NAEAYIVVENRELENQNRRLAI 366 (453)
Q Consensus 293 h~~~v~~v~~s~-~~--~~vas~d~tIrlWDl~t~~~~~~~~-g~~~~~~v~~~~~--~g~~l~s~s~dg~~~~~~~~i~ 366 (453)
|..+|.+++|+| ++ +++++.|++|++||+.++....... .+...+...++++ ++..+++++.++ +++
T Consensus 139 ~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-------~i~ 211 (814)
T 3mkq_A 139 HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL-------TIK 211 (814)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS-------EEE
T ss_pred CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC-------EEE
Confidence 889999999998 44 4555678999999999876655543 3334555667777 788999999999 999
Q ss_pred EEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCC--EEEEE
Q 046773 367 VRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDR--HVAAS 441 (453)
Q Consensus 367 Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~--~lasg 441 (453)
+|+..+++++..+..|...+..+.++|++.++++++. ++|++||+.+++++.++..|.+. |+ +++|+++ .++++
T Consensus 212 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ 290 (814)
T 3mkq_A 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-SWCIATHPTGRKNYIASG 290 (814)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS-EEEEEECTTCGGGEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc-EEEEEEccCCCceEEEEE
Confidence 9999999999999988888999999999999988887 99999999999999999999888 87 5678887 46767
Q ss_pred eCCcEEEEecC
Q 046773 442 CGTNIHLWDFG 452 (453)
Q Consensus 442 ~D~~IklWDl~ 452 (453)
.|+.+.+|+++
T Consensus 291 ~~~~~~~~~~~ 301 (814)
T 3mkq_A 291 FDNGFTVLSLG 301 (814)
T ss_dssp ETTEEEEEECS
T ss_pred eCCCEEEEEcC
Confidence 88889999864
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-31 Score=264.74 Aligned_cols=284 Identities=14% Similarity=0.108 Sum_probs=204.6
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCeEEEEecCCCC-----CccccccceEEEEEEc---CCeE
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRLHVRTFRPQHS-----DRLGQFSRAVSGIIIT---DSQL 205 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~-----~~~~~~s~~V~~i~f~---g~~L 205 (453)
.+|..+ |+|++|++ ++||+|+.|++|+|||+.++++..++..... .....+...|.+++|. +..|
T Consensus 40 ~~h~~~----v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 40 RIHGGG----INTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp CCCSSC----EEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eccCCc----EEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 379854 89999976 6999999999999999999987666541000 0000112368889885 4589
Q ss_pred EEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcc
Q 046773 206 IFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 206 asgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
++++.|++|++||+.+ + ...+. +...+ ..+.|+|.+.-...|++|+.|++|+|||+++++..
T Consensus 116 ~s~~~d~~i~iwd~~~-~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---------- 179 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNT-LQTADVFN-FEETV----YSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS---------- 179 (408)
T ss_dssp EEEETTSEEEEEETTT-TEEEEEEE-CSSCE----EEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC----------
T ss_pred EEEeCCCeEEEeeCCC-Cccceecc-CCCce----eeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee----------
Confidence 9999999999999987 4 11111 22222 24678775432224889999999999999988732
Q ss_pred eeeeeeeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCCc-eEEEE---------------eeccCCeEEEEEEe
Q 046773 284 VMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQG-MVLGE---------------RGYGRGLYVTSVDV 344 (453)
Q Consensus 284 v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~~-~~~~~---------------~g~~~~~~v~~~~~ 344 (453)
..+.+|...|.+++|+|++ +++++.|++|++||++++. ++... .+|...+...++++
T Consensus 180 ----~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 180 ----HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp ----EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred ----eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 3466788999999999876 3456678999999998865 22222 24444555556777
Q ss_pred cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC-----CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEE
Q 046773 345 NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA-----DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMY 418 (453)
Q Consensus 345 ~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~-----~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~ 418 (453)
+++.+++++.|+ .++||++.+++.+..+..+. ........+..+..++.++. ++|++||+.+++++.
T Consensus 256 ~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 328 (408)
T 4a11_B 256 DGLHLLTVGTDN-------RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT 328 (408)
T ss_dssp TSSEEEEEETTS-------CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE
T ss_pred CCCEEEEecCCC-------eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee
Confidence 888999999999 99999999887544332211 11111222223344554444 999999999999999
Q ss_pred EecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 419 SFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 419 tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++.+|.+. |. +|+||+++|+++ .|++|+|||+.
T Consensus 329 ~~~~~~~~-v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 329 MLKGHYKT-VDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EECCCSSC-EEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred eeccCCCe-EEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 99999998 87 678999999999 99999999985
No 62
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-31 Score=264.56 Aligned_cols=247 Identities=13% Similarity=0.099 Sum_probs=185.7
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCC--eEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeC
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTR--LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATL 210 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg--~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~ 210 (453)
.||..+ |.+++|++ ++|||||.|++|+|||+.++ +++.+|.+|.. .|.+++|+ ++.|++||.
T Consensus 58 ~~h~~~----v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~--------~v~~v~~sp~~~~l~s~s~ 125 (345)
T 3fm0_A 58 EGHQRT----VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN--------EVKSVAWAPSGNLLATCSR 125 (345)
T ss_dssp SSCSSC----EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS--------CEEEEEECTTSSEEEEEET
T ss_pred cccCCc----EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC--------CceEEEEeCCCCEEEEEEC
Confidence 489844 89999986 69999999999999999887 57899998764 58888885 678999999
Q ss_pred CCCEEEEEeecCC----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceee
Q 046773 211 DGDIHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMG 286 (453)
Q Consensus 211 D~tIkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~ 286 (453)
|++|+|||+.... +..+..|...+. .++|+|++++ |++|+.|++|+|||+++++...
T Consensus 126 D~~v~iwd~~~~~~~~~~~~~~~h~~~v~----~~~~~p~~~~---l~s~s~d~~i~~w~~~~~~~~~------------ 186 (345)
T 3fm0_A 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVK----HVVWHPSQEL---LASASYDDTVKLYREEEDDWVC------------ 186 (345)
T ss_dssp TSCEEEEEECTTSCEEEEEEECCCCSCEE----EEEECSSSSC---EEEEETTSCEEEEEEETTEEEE------------
T ss_pred CCeEEEEECCCCCCeEEEEEecCcCCCeE----EEEECCCCCE---EEEEeCCCcEEEEEecCCCEEE------------
Confidence 9999999997622 233445655443 4899999996 8899999999999998876211
Q ss_pred eeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCC---------------ceEEEEee-ccCCeEEEEEEecCCE
Q 046773 287 WRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQ---------------GMVLGERG-YGRGLYVTSVDVNAEA 348 (453)
Q Consensus 287 w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~---------------~~~~~~~g-~~~~~~v~~~~~~g~~ 348 (453)
..++.+|...|.+|+|+|++ +++++.|++|||||+... .|+.+..+ |...+...++++++..
T Consensus 187 ~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 266 (345)
T 3fm0_A 187 CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA 266 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC
T ss_pred EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE
Confidence 13577899999999999876 455577899999997432 23333333 5555666667778889
Q ss_pred EEEEeCCCccccCcceEEEEEcCCCe----eEE-----EEEecCCCeeEEEEeeCCC-eEEEEeC-CeEEEEECCCCeEE
Q 046773 349 YIVVENRELENQNRRLAIVRRVDTFE----EVC-----RFSLRADRNVNVMGCMNQG-YALMCVE-GVIRVWEVEGGEYM 417 (453)
Q Consensus 349 l~s~s~dg~~~~~~~~i~Iw~~~tg~----~v~-----~l~~~~~~v~~~~~~~~~~-~lls~s~-~tIrlWD~~tG~~l 417 (453)
+++++.|+ +++||+.+++. +.. .+..|...|..++++|++. .+++++. ++|+|||+.+++.+
T Consensus 267 l~s~~~d~-------~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 267 LATACGDD-------AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp EEEEETTS-------CEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred EEEEeCCC-------eEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 99999999 99999987642 111 1235677799999999874 7777777 99999999998876
Q ss_pred EEec
Q 046773 418 YSFR 421 (453)
Q Consensus 418 ~tL~ 421 (453)
..++
T Consensus 340 ~~~~ 343 (345)
T 3fm0_A 340 HHHH 343 (345)
T ss_dssp ----
T ss_pred cccc
Confidence 6543
No 63
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8e-31 Score=263.39 Aligned_cols=247 Identities=12% Similarity=0.104 Sum_probs=200.2
Q ss_pred eEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceee
Q 046773 175 LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWV 251 (453)
Q Consensus 175 ~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~ 251 (453)
++.++|.||.. .|.+++|+ +++|+|||.|++|+|||..+.. .+.+..|...+. .++|+|+|+.
T Consensus 55 ~~~~~l~gH~~--------~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~----~~~~sp~g~~-- 120 (354)
T 2pbi_B 55 KTRRTLKGHGN--------KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM----ACAYAPSGCA-- 120 (354)
T ss_dssp CEEEEEECCSS--------CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC----EEEECTTSSE--
T ss_pred EEEEEecCCCC--------eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE----EEEECCCCCE--
Confidence 46788999765 68888885 6789999999999999987621 344555554443 5899999996
Q ss_pred EEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEE
Q 046773 252 GLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLG 329 (453)
Q Consensus 252 ~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~ 329 (453)
|++|+.|++|+||++.....- ........+.+|+..|.+++|+|++ +++++.|++|+|||+++++++..
T Consensus 121 -lasg~~d~~i~v~~~~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~ 191 (354)
T 2pbi_B 121 -IACGGLDNKCSVYPLTFDKNE--------NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQS 191 (354)
T ss_dssp -EEEESTTSEEEEEECCCCTTC--------CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -EEEeeCCCCEEEEEEeccccc--------cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Confidence 889999999999999765310 0000013567899999999999876 56667889999999999988877
Q ss_pred EeeccCCeEEEEEEec--CCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeE
Q 046773 330 ERGYGRGLYVTSVDVN--AEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVI 406 (453)
Q Consensus 330 ~~g~~~~~~v~~~~~~--g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tI 406 (453)
+.+|...+...+++|+ ++.+++++.|+ ++++||+.+++++..+..|...+..+.++|++.++++++. ++|
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDK-------KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTS-------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCC-------eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 7788776666666664 57899999999 9999999999999999999999999999999999998887 999
Q ss_pred EEEECCCCeEEEEecccC--CceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 407 RVWEVEGGEYMYSFRERI--GEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 407 rlWD~~tG~~l~tL~gh~--~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
||||+.+++++..+..+. .. +. +|+|++++|+++ .|++|+|||+.
T Consensus 265 ~lwd~~~~~~~~~~~~~~~~~~-~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 265 RLYDLRADREVAIYSKESIIFG-ASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp EEEETTTTEEEEEECCTTCCSC-EEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEECCCCcEEEEEcCCCcccc-eeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 999999999888776543 23 44 788999999999 99999999973
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=276.19 Aligned_cols=280 Identities=14% Similarity=0.137 Sum_probs=212.5
Q ss_pred EEEEEecCC---EEEEE----------eCCCcEEEEECCCCe---EEEEecCCCCCccccccceEEEEEEc--CCeEEEE
Q 046773 147 CRCLTLSDL---YLACG----------FADGAVRLFDLTTRL---HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA 208 (453)
Q Consensus 147 v~~lafs~~---~LaSG----------S~D~TIrlWD~~tg~---~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg 208 (453)
|.|++|+++ +||+| +.|++|+|||+.+++ ++.++. |. ..|.+++|+ +..|++|
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~--------~~v~~~~~s~~~~~l~~~ 85 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ-VD--------SKFNDLDWSHNNKIIAGA 85 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC-CS--------SCEEEEEECSSSSCEEEE
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe-cC--------CceEEEEECCCCCeEEEE
Confidence 678899863 89999 999999999999997 444442 33 258888885 6789999
Q ss_pred eCCCCEEEEEeecC--C---cceEEeeecceecCceEEEEeCC-CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCc
Q 046773 209 TLDGDIHVAVIDDV--A---NETRTAHFGSVMDDGVLIDFTGC-SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 209 S~D~tIkvWd~~~~--g---~~~~~~~~~~v~~~~~~v~Fs~d-g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
+.|++|+|||+... + ...+..|...+. .++|+|+ +++ |++|+.|++|+|||+++++.... ..
T Consensus 86 ~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~-----~~ 153 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAINSMARFSNHSSSVK----TVKFNAKQDNV---LASGGNNGEIFIWDMNKCTESPS-----NY 153 (416)
T ss_dssp ESSSCEEEECCSSTTSCCCEEEECCCSSSCCC----EEEECSSSTTB---EEEECSSSCEEBCBTTTTSSCTT-----TC
T ss_pred ccCCeEEEeecccccccccchhhccCCccceE----EEEEcCCCCCE---EEEEcCCCeEEEEECCCCccccc-----cc
Confidence 99999999999761 1 334445655543 5899999 665 88999999999999998751000 00
Q ss_pred ceeeeeeeeeeccceeEEEEcCC-c-e-EEEEcCCcEEEEECCCCceEEEEeec------cCCeEEEEEEecC-CEEEEE
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSH-E-S-AVACTSSRVITFDLRNQGMVLGERGY------GRGLYVTSVDVNA-EAYIVV 352 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~-~-~-~vas~d~tIrlWDl~t~~~~~~~~g~------~~~~~v~~~~~~g-~~l~s~ 352 (453)
.......+.+|...|.+++|+|+ . . ++++.|++|++||+++++++.....+ ...+...+|++++ ..++++
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 233 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA 233 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE
Confidence 00001224578889999999987 3 3 34456789999999998877665443 3344445566665 467887
Q ss_pred eCCCccccCcceEEEEEcCCC-eeEEEEE-ecCCCeeEEEEee-CCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceE
Q 046773 353 ENRELENQNRRLAIVRRVDTF-EEVCRFS-LRADRNVNVMGCM-NQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEV 428 (453)
Q Consensus 353 s~dg~~~~~~~~i~Iw~~~tg-~~v~~l~-~~~~~v~~~~~~~-~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V 428 (453)
+.++ ++..++|||+.++ +++..+. .|...+..+.+++ ++.++++++. ++|+|||+.+++++.++.+|.+. |
T Consensus 234 ~~d~----~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-v 308 (416)
T 2pm9_A 234 TGSD----NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-C 308 (416)
T ss_dssp ECCS----SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-C
T ss_pred ECCC----CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-e
Confidence 7764 2337999999986 5667777 7888899999999 7888888877 99999999999999999999988 7
Q ss_pred E--EEecCC-CEEEEE-eCCcEEEEecC
Q 046773 429 I--AFVGDD-RHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 429 ~--a~s~d~-~~lasg-~D~~IklWDl~ 452 (453)
. +|+||+ ++|+++ .|++|+|||+.
T Consensus 309 ~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 309 FKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp CCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred EEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 6 788998 799999 99999999985
No 65
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-31 Score=269.79 Aligned_cols=238 Identities=10% Similarity=0.020 Sum_probs=180.3
Q ss_pred CCCCCCCeEEEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEec----CCCCCccccccceEEEEEEc--CCeEEEEeC
Q 046773 138 DVDNPDGLTCRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFR----PQHSDRLGQFSRAVSGIIIT--DSQLIFATL 210 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~----gh~~~~~~~~s~~V~~i~f~--g~~LasgS~ 210 (453)
+|.. + |+|++|++ ..+++++.|++|||||+.+++++.++. +|. ..|.+++|+ ++.|++|+.
T Consensus 92 ~~~~--~--V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~--------~~V~~v~~spdg~~l~sgs~ 159 (357)
T 4g56_B 92 QTEA--G--VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHD--------DIVKTLSVFSDGTQAVSGGK 159 (357)
T ss_dssp ECSS--C--EEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCS--------SCEEEEEECSSSSEEEEEET
T ss_pred CCCC--C--EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCC--------CCEEEEEECCCCCEEEEEeC
Confidence 5763 3 89999997 578889999999999999998765432 443 268888885 678999999
Q ss_pred CCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeee
Q 046773 211 DGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWR 288 (453)
Q Consensus 211 D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~ 288 (453)
|++|+|||+++ + +..+.+|...+. .|+|+|+++. .|++++.|++|+|||+++++.... .
T Consensus 160 dg~v~iwd~~~-~~~~~~~~~h~~~v~----~v~~s~~~~~--~~~s~~~dg~v~~wd~~~~~~~~~------------~ 220 (357)
T 4g56_B 160 DFSVKVWDLSQ-KAVLKSYNAHSSEVN----CVAACPGKDT--IFLSCGEDGRILLWDTRKPKPATR------------I 220 (357)
T ss_dssp TSCEEEEETTT-TEEEEEECCCSSCEE----EEEECTTCSS--CEEEEETTSCEEECCTTSSSCBCB------------C
T ss_pred CCeEEEEECCC-CcEEEEEcCCCCCEE----EEEEccCCCc--eeeeeccCCceEEEECCCCceeee------------e
Confidence 99999999987 4 455666766554 4899999874 378999999999999999873210 1
Q ss_pred eeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCC-EEEEEeCCCccccCcce
Q 046773 289 MLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAE-AYIVVENRELENQNRRL 364 (453)
Q Consensus 289 ~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~-~l~s~s~dg~~~~~~~~ 364 (453)
.+..|...+.+|+|+|+. +++++.|++|+|||+++++++.++.+|...+...+|+|++. .+++++.|+ +
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~-------~ 293 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC-------T 293 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS-------C
T ss_pred eeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC-------E
Confidence 123455778999999753 34456789999999999988777777776666666777764 578999999 9
Q ss_pred EEEEEcCCCeeEEEEEecCCCeeEEEEee-CCCeEEEEeC-CeEEEEECCCC
Q 046773 365 AIVRRVDTFEEVCRFSLRADRNVNVMGCM-NQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 365 i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~-~~~~lls~s~-~tIrlWD~~tG 414 (453)
|+|||+++++++..+ .|.+.|..++|+| ++.++++++. ++|+|||+.+.
T Consensus 294 i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 294 VAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 999999999887665 6888899999998 6788888887 99999999763
No 66
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.2e-31 Score=257.58 Aligned_cols=240 Identities=12% Similarity=0.141 Sum_probs=184.8
Q ss_pred EEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC-C--cceEEeeecceecCceEEEEeCC--Ccee
Q 046773 178 RTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV-A--NETRTAHFGSVMDDGVLIDFTGC--SRYW 250 (453)
Q Consensus 178 ~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~-g--~~~~~~~~~~v~~~~~~v~Fs~d--g~~~ 250 (453)
.++.+|.. .|.+++|+ |++||+||.|++|+|||++.. + +.++.+|.+.|. .|+|+|+ |++
T Consensus 3 ~~~~~h~~--------~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~----~v~~s~~~~g~~- 69 (297)
T 2pm7_B 3 VIANAHNE--------MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW----RVDWAHPKFGTI- 69 (297)
T ss_dssp EECCSCSS--------CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE----EEEECCGGGCSE-
T ss_pred eeccCCcC--------ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE----EEEecCCCcCCE-
Confidence 45667654 68888886 789999999999999999741 1 467778877664 4899864 765
Q ss_pred eEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC--c--eEEEEcCCcEEEEECCCCce
Q 046773 251 VGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH--E--SAVACTSSRVITFDLRNQGM 326 (453)
Q Consensus 251 ~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~--~--~~vas~d~tIrlWDl~t~~~ 326 (453)
|+|||.|++|+|||+++++... ..++.+|...|.+|+|+|+ + +++++.|++|++||++++..
T Consensus 70 --l~s~s~D~~v~iWd~~~~~~~~------------~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 70 --LASCSYDGKVMIWKEENGRWSQ------------IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp --EEEEETTTEEEEEEBSSSCBCC------------CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred --EEEEcCCCEEEEEEcCCCceEE------------EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence 8999999999999999875100 1245678899999999985 2 46667889999999987642
Q ss_pred --EEEEeeccCCeEEEEEEec-------------CCEEEEEeCCCccccCcceEEEEEcCCCe----eEEEEEecCCCee
Q 046773 327 --VLGERGYGRGLYVTSVDVN-------------AEAYIVVENRELENQNRRLAIVRRVDTFE----EVCRFSLRADRNV 387 (453)
Q Consensus 327 --~~~~~g~~~~~~v~~~~~~-------------g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~----~v~~l~~~~~~v~ 387 (453)
...+.+|...+...+|+|+ +..+++++.|+ +|+|||..+++ .+.++..|.+.|.
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-------~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-------LVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS-------CEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-------cEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 2334566655544455554 35899999999 99999998765 5667888888999
Q ss_pred EEEEeeCC---CeEEEEeC-CeEEEEECCCCe---EEEEe--cccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 388 NVMGCMNQ---GYALMCVE-GVIRVWEVEGGE---YMYSF--RERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 388 ~~~~~~~~---~~lls~s~-~tIrlWD~~tG~---~l~tL--~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+.++|++ .++++++. ++|+|||+.+++ ....+ .+|.+. |+ +|+||+++||++ .|++|+||+..
T Consensus 209 ~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC-EEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCc-EEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999984 67777776 999999998753 22334 567777 87 678999999999 99999999864
No 67
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-30 Score=257.84 Aligned_cols=238 Identities=11% Similarity=0.102 Sum_probs=186.2
Q ss_pred eEEEEecCCCCCccccccceEEEEEE--------cCCeEEEEeCCCCEEEEEeecC------C--cceEEeeecceecCc
Q 046773 175 LHVRTFRPQHSDRLGQFSRAVSGIII--------TDSQLIFATLDGDIHVAVIDDV------A--NETRTAHFGSVMDDG 238 (453)
Q Consensus 175 ~~~~tl~gh~~~~~~~~s~~V~~i~f--------~g~~LasgS~D~tIkvWd~~~~------g--~~~~~~~~~~v~~~~ 238 (453)
+++.+|+||.. .|.+++| ++..|+|||.|++|+|||+... + ..++.+|...|.
T Consensus 12 ~~~~~l~gH~~--------~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~--- 80 (343)
T 2xzm_R 12 VKRGILEGHSD--------WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS--- 80 (343)
T ss_dssp EEEEEEECCSS--------CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE---
T ss_pred eeeeeeccchh--------hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE---
Confidence 56788999765 6888988 5678999999999999999641 1 234556666554
Q ss_pred eEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcE
Q 046773 239 VLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRV 316 (453)
Q Consensus 239 ~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tI 316 (453)
.++|+|++++ |+|||.|++|+|||+++++.+ .++.+|...|.+|+|+|++ +++++.|++|
T Consensus 81 -~~~~~~~~~~---l~s~s~D~~v~lwd~~~~~~~--------------~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 81 -DLALSQENCF---AISSSWDKTLRLWDLRTGTTY--------------KRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp -EEEECSSTTE---EEEEETTSEEEEEETTSSCEE--------------EEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred -EEEECCCCCE---EEEEcCCCcEEEEECCCCcEE--------------EEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 4899999986 889999999999999998854 3567899999999999876 4556778999
Q ss_pred EEEECCCCceEEEE---eeccCCeEEEEEEecC----------CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC
Q 046773 317 ITFDLRNQGMVLGE---RGYGRGLYVTSVDVNA----------EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA 383 (453)
Q Consensus 317 rlWDl~t~~~~~~~---~g~~~~~~v~~~~~~g----------~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~ 383 (453)
+|||+.. .+.... .+|...+...+++|++ ..+++++.|+ +|+||| ..++....+..|.
T Consensus 143 ~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-------~i~iwd-~~~~~~~~~~~h~ 213 (343)
T 2xzm_R 143 KLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG-------RLKVWN-TNFQIRYTFKAHE 213 (343)
T ss_dssp EEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS-------EEEEEE-TTTEEEEEEECCS
T ss_pred EEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC-------EEEEEc-CCCceeEEEcCcc
Confidence 9999984 444433 2454444444555554 5789999999 999999 4567777888888
Q ss_pred CCeeEEEEeeCCCeEEEEeC-CeEEEEECC-CCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 384 DRNVNVMGCMNQGYALMCVE-GVIRVWEVE-GGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 384 ~~v~~~~~~~~~~~lls~s~-~tIrlWD~~-tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
..+..+.++|++.++++++. ++|+|||+. .+.+...+. +... |+ +|+|++++|+++.|+.|+|||+.
T Consensus 214 ~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~-v~~v~~sp~~~~la~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 214 SNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGST-INQIAFNPKLQWVAVGTDQGVKIFNLM 284 (343)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSC-EEEEEECSSSCEEEEEESSCEEEEESS
T ss_pred ccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCc-EEEEEECCCCCEEEEECCCCEEEEEeC
Confidence 88999999999999998887 999999994 445555553 3444 66 77899999887789999999974
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-30 Score=264.43 Aligned_cols=239 Identities=15% Similarity=0.151 Sum_probs=185.8
Q ss_pred eEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEee
Q 046773 145 LTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVID 220 (453)
Q Consensus 145 v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~ 220 (453)
.+|+|++|++ ++||||+.|++|+|||++++++++++.+|.. .|.+++|+ ++.|++||.|++|++||+.
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~--------~v~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ--------DIYSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC--------CEEEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 3489999986 6999999999999999999999999998764 57888885 6789999999999999998
Q ss_pred cCCcceEE-eeecceecCceEEEEeC-CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecccee
Q 046773 221 DVANETRT-AHFGSVMDDGVLIDFTG-CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVG 298 (453)
Q Consensus 221 ~~g~~~~~-~~~~~v~~~~~~v~Fs~-dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~ 298 (453)
+ +..... .+...+ ..++|+| +|++ |++|+.|++|+|||+++++...- +... -....+|...|.
T Consensus 196 ~-~~~~~~~~~~~~v----~~~~~~~~~~~~---l~~~s~d~~v~iwd~~~~~~~~~--~~~~-----~~~~~~h~~~v~ 260 (393)
T 1erj_A 196 T-GQCSLTLSIEDGV----TTVAVSPGDGKY---IAAGSLDRAVRVWDSETGFLVER--LDSE-----NESGTGHKDSVY 260 (393)
T ss_dssp T-TEEEEEEECSSCE----EEEEECSTTCCE---EEEEETTSCEEEEETTTCCEEEE--EC-----------CCCSSCEE
T ss_pred C-CeeEEEEEcCCCc----EEEEEECCCCCE---EEEEcCCCcEEEEECCCCcEEEe--eccc-----ccCCCCCCCCEE
Confidence 7 411111 122222 2489999 7886 88999999999999999884320 0000 012357889999
Q ss_pred EEEEcCCc--eEEEEcCCcEEEEECCCC------------ceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcce
Q 046773 299 RVRVTSHE--SAVACTSSRVITFDLRNQ------------GMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRL 364 (453)
Q Consensus 299 ~v~~s~~~--~~vas~d~tIrlWDl~t~------------~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~ 364 (453)
+|+|+|++ +++++.|++|+|||+++. .|..+..+|...+...++++++..+++++.|+ +
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-------~ 333 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-------G 333 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-------E
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-------e
Confidence 99999876 455567899999999863 34445567766666666778889999999999 9
Q ss_pred EEEEEcCCCeeEEEEEecCCCeeEEEEee------CCCeEEEEeC-CeEEEEECCC
Q 046773 365 AIVRRVDTFEEVCRFSLRADRNVNVMGCM------NQGYALMCVE-GVIRVWEVEG 413 (453)
Q Consensus 365 i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~------~~~~lls~s~-~tIrlWD~~t 413 (453)
++|||..+++++..+..|.+.|..+.+++ ++.++++++. ++|||||+..
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999999999999999998899998876 4567777776 9999999864
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.3e-31 Score=268.91 Aligned_cols=279 Identities=11% Similarity=0.138 Sum_probs=201.6
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCe-----------EEEEecCCCCCcccc-----ccceEEEEEEcC----Ce
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRL-----------HVRTFRPQHSDRLGQ-----FSRAVSGIIITD----SQ 204 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~-----------~~~tl~gh~~~~~~~-----~s~~V~~i~f~g----~~ 204 (453)
|+|++|++ ++||+|+.|++|+|||+.+++ ++.++.+|..+ +.. ....|.+++|++ ..
T Consensus 31 V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~-~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPE-FDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCE-EEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccc-ccccccccccCceEEEEEcCCCCcce
Confidence 89999986 699999999999999999988 68899987510 000 002477788863 47
Q ss_pred EEEEeCCCCEEEEEeecCCcc----------------------------------------e-EEeeecceecCceEEEE
Q 046773 205 LIFATLDGDIHVAVIDDVANE----------------------------------------T-RTAHFGSVMDDGVLIDF 243 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~g~~----------------------------------------~-~~~~~~~v~~~~~~v~F 243 (453)
|++++.|++|++||+...... . ..+|...|. .++|
T Consensus 110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~ 185 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN----SISI 185 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC----EEEE
T ss_pred EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE----EEEE
Confidence 999999999999998751100 0 123443332 5899
Q ss_pred eCCCceeeEEEEeeCCCeEEEeeCCCCc-EEecccccCCcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCCcEEEE
Q 046773 244 TGCSRYWVGLYAGLAGRAFHIWDRQAEE-VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSRVITF 319 (453)
Q Consensus 244 s~dg~~~~~LaSgS~D~tIrvWD~~tg~-~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlW 319 (453)
+|+|++ |++| .|++|+|||++++. .+.--.+ .+ ..+.+|...|.+++|+|++ +++++.|++|++|
T Consensus 186 ~~~~~~---l~s~-~d~~i~iwd~~~~~~~~~~~~~-~~------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 186 NSDYET---YLSA-DDLRINLWHLEITDRSFNIVDI-KP------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp CTTSSE---EEEE-CSSEEEEEETTEEEEEEEEEEC-CC------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred cCCCCE---EEEe-CCCeEEEEECCCCCceeeeeec-cc------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 999996 7788 79999999998543 3210000 00 1356888999999999875 5566778999999
Q ss_pred ECCCCce----EEEEeeccC------------CeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCC-CeeEEEEEec
Q 046773 320 DLRNQGM----VLGERGYGR------------GLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDT-FEEVCRFSLR 382 (453)
Q Consensus 320 Dl~t~~~----~~~~~g~~~------------~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~t-g~~v~~l~~~ 382 (453)
|++++++ +..+.+|.. .+...+|++++..+++++. + +++|||+.+ ++++..+..|
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~-------~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L-------SVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S-------EEEEEETTCCSSCSCCEESC
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C-------eEEEEeCCCCccccceeecc
Confidence 9999875 444555543 4555667788889999888 8 999999997 8888888776
Q ss_pred CCC---------------eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccC----------------------
Q 046773 383 ADR---------------NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERI---------------------- 424 (453)
Q Consensus 383 ~~~---------------v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~---------------------- 424 (453)
... +..+.+++++.++++++. ++|+|||+.+++++ ++.+|.
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKK 405 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCT
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCccc
Confidence 421 123889999999988887 99999999999886 444442
Q ss_pred -----------CceEE--EEecCCCEEEEEeCCcEEEEec
Q 046773 425 -----------GEEVI--AFVGDDRHVAASCGTNIHLWDF 451 (453)
Q Consensus 425 -----------~~~V~--a~s~d~~~lasg~D~~IklWDl 451 (453)
.. |. +++|++.+||++..+.+.||.-
T Consensus 406 ~~~~~~~~~~~~~-i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 406 DEISVDSLDFNKK-ILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp TCEEGGGCCTTSC-CCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ccccccccccCCc-eeEEEECCCCCEEEEEecceeeeecc
Confidence 22 33 7889999999994446888864
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.8e-30 Score=271.73 Aligned_cols=292 Identities=10% Similarity=0.054 Sum_probs=215.6
Q ss_pred CCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCeEEEEe-c---CCCCCccccccceEEEEEE-cCCeEEEEe
Q 046773 138 DVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRLHVRTF-R---PQHSDRLGQFSRAVSGIII-TDSQLIFAT 209 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~~tl-~---gh~~~~~~~~s~~V~~i~f-~g~~LasgS 209 (453)
+|.. .+..|.|++|++ ++|++|+.|++|+|||+.++++++++ . +|.. .|.+++| +++.|++++
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~l~~~~ 271 (615)
T 1pgu_A 201 THHK-QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG--------GIFALSWLDSQKFATVG 271 (615)
T ss_dssp SSSC-TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS--------CEEEEEESSSSEEEEEE
T ss_pred ccCC-CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCC--------ceEEEEEcCCCEEEEEc
Confidence 6774 000188999975 49999999999999999999999999 5 5543 5788888 678899999
Q ss_pred CCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc---EEecccc------
Q 046773 210 LDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE---VFVGGDL------ 278 (453)
Q Consensus 210 ~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~---~~~g~~l------ 278 (453)
.|++|++||+.+ + +..+..+...+......+.|+ ++++ |++|+.|++|++||+.+++ .+.+|.-
T Consensus 272 ~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~ 346 (615)
T 1pgu_A 272 ADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGR---IISLSLDGTLNFYELGHDEVLKTISGHNKGITALT 346 (615)
T ss_dssp TTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTE---EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCe---EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEE
Confidence 999999999987 4 333333321111111235664 6665 7899999999999999876 2333210
Q ss_pred -------------------------------------------cCCcceeeeeeee------------------------
Q 046773 279 -------------------------------------------TDHNTVMGWRMLT------------------------ 291 (453)
Q Consensus 279 -------------------------------------------~~~~~v~~w~~l~------------------------ 291 (453)
..+..+..|..-.
T Consensus 347 ~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 426 (615)
T 1pgu_A 347 VNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTND 426 (615)
T ss_dssp TTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETT
T ss_pred ecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCC
Confidence 0011111121100
Q ss_pred -----------------eeccceeEEEEcCCceEEEEc-CCcEEEEECCCCceE-EEEeeccCCeEEEEEEecCCEEEEE
Q 046773 292 -----------------EFTEFVGRVRVTSHESAVACT-SSRVITFDLRNQGMV-LGERGYGRGLYVTSVDVNAEAYIVV 352 (453)
Q Consensus 292 -----------------~h~~~v~~v~~s~~~~~vas~-d~tIrlWDl~t~~~~-~~~~g~~~~~~v~~~~~~g~~l~s~ 352 (453)
.|...+.+++|+++.+++++. |++|++||+.++... ....+|...+...+|+++++.++++
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 506 (615)
T 1pgu_A 427 DDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 506 (615)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc
Confidence 133455666666444555566 778888888875433 2234555555556677889999999
Q ss_pred eCCCccccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEEee----------CCCeEEEEeC-CeEEEEECCCC-eEEEE
Q 046773 353 ENRELENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMGCM----------NQGYALMCVE-GVIRVWEVEGG-EYMYS 419 (453)
Q Consensus 353 s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~~~----------~~~~lls~s~-~tIrlWD~~tG-~~l~t 419 (453)
+.|+ .++||++.+++++..+.. |...+..+.++| ++.++++++. ++|+|||++++ +++.+
T Consensus 507 ~~dg-------~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 507 DVMG-------KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp ETTS-------CEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred CCCC-------eEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence 9999 999999999999888876 888899999999 8999988887 99999999998 89999
Q ss_pred ecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 420 FRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 420 L~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+.+|.+. |+ +|+||++ |+++ .|++|+|||+.
T Consensus 580 ~~~h~~~-v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 580 LNAHKDG-VNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp TTSSTTC-EEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred hhcCccc-eEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9999988 87 6789999 9998 99999999985
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.98 E-value=7.7e-30 Score=249.12 Aligned_cols=243 Identities=12% Similarity=0.157 Sum_probs=197.0
Q ss_pred CeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCcee
Q 046773 174 RLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYW 250 (453)
Q Consensus 174 g~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~ 250 (453)
.....+|.+|.. .|.+++|+ ++.|++|+.|++|+||++.+.. ...+..|...+. .++|+|++++
T Consensus 13 ~~~~~~~~gh~~--------~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~- 79 (312)
T 4ery_A 13 YALKFTLAGHTK--------AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS----DVAWSSDSNL- 79 (312)
T ss_dssp CEEEEEECCCSS--------CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE----EEEECTTSSE-
T ss_pred ceeEEEEcccCC--------cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE----EEEEcCCCCE-
Confidence 345678888764 68888886 6789999999999999987622 345555665543 4899999986
Q ss_pred eEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEE
Q 046773 251 VGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVL 328 (453)
Q Consensus 251 ~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~ 328 (453)
|++|+.|++|+|||+++++.. ..+.+|...|.++.|+|++ +++++.|++|++||+++++++.
T Consensus 80 --l~s~~~d~~i~vwd~~~~~~~--------------~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 80 --LVSASDDKTLKIWDVSSGKCL--------------KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 143 (312)
T ss_dssp --EEEEETTSEEEEEETTTCCEE--------------EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred --EEEECCCCEEEEEECCCCcEE--------------EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE
Confidence 889999999999999998853 3467888999999999876 4555678999999999998877
Q ss_pred EEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEec-CCCeeEEEEeeCCCeEEEEeC-CeE
Q 046773 329 GERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLR-ADRNVNVMGCMNQGYALMCVE-GVI 406 (453)
Q Consensus 329 ~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~-~~~v~~~~~~~~~~~lls~s~-~tI 406 (453)
.+..|...+...+++++++.+++++.|+ .++|||..+++++..+... ...+..+.+++++.++++++. ++|
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 144 TLPAHSDPVSAVHFNRDGSLIVSSSYDG-------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred EecCCCCcEEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 7766766666666778888999999999 9999999999888776433 344778889999999998887 999
Q ss_pred EEEECCCCeEEEEecccCCce--EE-EEe-cCCCEEEEE-eCCcEEEEecC
Q 046773 407 RVWEVEGGEYMYSFRERIGEE--VI-AFV-GDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 407 rlWD~~tG~~l~tL~gh~~~~--V~-a~s-~d~~~lasg-~D~~IklWDl~ 452 (453)
+|||+.+++++..+.+|.... +. .++ +++++|+++ .|++|+|||+.
T Consensus 217 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp EEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred EEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 999999999999999987641 21 344 678899999 99999999975
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.3e-30 Score=252.57 Aligned_cols=287 Identities=11% Similarity=-0.001 Sum_probs=191.0
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCC----eEEEEecCCCCCccccccceEEEEEEc----CCeEE
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTR----LHVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLI 206 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg----~~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~La 206 (453)
.||.++ |+|++|++ ++||+|+.|++|+|||+.++ +++.++.+|.. .|.+++|+ ++.|+
T Consensus 8 ~gH~~~----v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 8 SGHDDL----VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS--------SIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CCCSSC----EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS--------CEEEEEECCGGGCSEEE
T ss_pred cccccc----eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC--------cEEEEEEcCCCCCCEEE
Confidence 489855 89999986 69999999999999999988 57788887654 68889885 67899
Q ss_pred EEeCCCCEEEEEeecCC----------cceEEeeecceecCceEEEEeCC--CceeeEEEEeeCCCeEEEeeCCCCcEEe
Q 046773 207 FATLDGDIHVAVIDDVA----------NETRTAHFGSVMDDGVLIDFTGC--SRYWVGLYAGLAGRAFHIWDRQAEEVFV 274 (453)
Q Consensus 207 sgS~D~tIkvWd~~~~g----------~~~~~~~~~~v~~~~~~v~Fs~d--g~~~~~LaSgS~D~tIrvWD~~tg~~~~ 274 (453)
+|+.|++|+|||+++.. ...+..|...+. .++|+|+ +++ |++|+.|++|+|||+++++...
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~~~---l~~~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY----SVKFAPAHLGLK---LACLGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE----EEEECCGGGCSE---EEEEETTCEEEEEECSSTTCTT
T ss_pred EEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee----EEEEcCCCCCcE---EEEecCCCcEEEecCCChHHhc
Confidence 99999999999998621 223334544443 4899999 886 8899999999999999887211
Q ss_pred cccccCCcceeee-eeeeeeccceeEEEEcCC---c--eEEEEcCCcEEEEECCCCce--EEEEeeccCCeEEEEEEecC
Q 046773 275 GGDLTDHNTVMGW-RMLTEFTEFVGRVRVTSH---E--SAVACTSSRVITFDLRNQGM--VLGERGYGRGLYVTSVDVNA 346 (453)
Q Consensus 275 g~~l~~~~~v~~w-~~l~~h~~~v~~v~~s~~---~--~~vas~d~tIrlWDl~t~~~--~~~~~g~~~~~~v~~~~~~g 346 (453)
--.+. ...... ....+|...+.++.++|+ . +++++.++.+.+|+..++.. +....+|...+...++++++
T Consensus 149 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 149 SWTLT--SEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSI 226 (351)
T ss_dssp CCEEE--EEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCS
T ss_pred ccccc--ccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCC
Confidence 00000 000000 011256778899999874 3 45556678888888887654 23335666555555666776
Q ss_pred ----CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEE----eC-CeEEEEECCCCeEE
Q 046773 347 ----EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMC----VE-GVIRVWEVEGGEYM 417 (453)
Q Consensus 347 ----~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~----s~-~tIrlWD~~tG~~l 417 (453)
+.+++++.|+ +|+||++.++.+.................+.......+ .. ..+++|+..+++++
T Consensus 227 ~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (351)
T 3f3f_A 227 GRWYQLIATGCKDG-------RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELL 299 (351)
T ss_dssp SCSSEEEEEEETTS-------CEEEEEEEECC---------------------------------------CCSEEEEEE
T ss_pred CCcceEEEEEcCCC-------eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEE
Confidence 5799999999 99999998765433222111111111111111111111 12 67888998899999
Q ss_pred EEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 418 YSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 418 ~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.++.+|.+. |+ +|+||+++|+++ .|++|+|||+.
T Consensus 300 ~~~~~h~~~-v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 300 SEHDDHNGE-VWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEECTTSSC-EEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEeccccc-EEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 999999999 88 678999999999 99999999975
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=7.8e-30 Score=260.93 Aligned_cols=251 Identities=12% Similarity=0.128 Sum_probs=198.4
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEE
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIH 215 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIk 215 (453)
+|.+. |+||+|++ ++||+|+.|++|+|||++++++++++.+|.. .+.++++++..|++|+.|++++
T Consensus 145 ~~~~~----V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~--------~v~~~s~~~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 145 QPGEY----ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA--------RVGSLSWNSYILSSGSRSGHIH 212 (420)
T ss_dssp STTCC----EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEEEEEEETTEEEEEETTSEEE
T ss_pred CCCCc----EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC--------ceEEEeeCCCEEEEEeCCCcee
Confidence 66633 89999986 6999999999999999999999999998764 5788999999999999999999
Q ss_pred EEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 216 VAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 216 vWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
+||..... +.++.+|...+. .+.|+|+|++ |++++.|++|+|||..+++... ........|
T Consensus 213 ~~d~~~~~~~~~~~~~h~~~~~----~~~~~~~g~~---l~s~~~D~~v~i~~~~~~~~~~----------~~~~~~~~~ 275 (420)
T 4gga_A 213 HHDVRVAEHHVATLSGHSQEVC----GLRWAPDGRH---LASGGNDNLVNVWPSAPGEGGW----------VPLQTFTQH 275 (420)
T ss_dssp EEETTSSSCEEEEEECCSSCEE----EEEECTTSSE---EEEEETTSCEEEEESSCCSSCS----------CCSEEECCC
T ss_pred EeeecccceeeEEeccccccee----eeeecCCCCe---eeeeeccccceEEeeccccccc----------eeeeeeccc
Confidence 99987632 355566665543 4889999996 8899999999999999876210 001345678
Q ss_pred ccceeEEEEcCCc---eEEEE--cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe--CCCccccCcceEE
Q 046773 294 TEFVGRVRVTSHE---SAVAC--TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE--NRELENQNRRLAI 366 (453)
Q Consensus 294 ~~~v~~v~~s~~~---~~vas--~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s--~dg~~~~~~~~i~ 366 (453)
...|.+++|+|.. +++++ .|++||+||+.+++++.....+. .+....+.++++.+++++ .|+ +|+
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~lv~~sg~~d~-------~I~ 347 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKELISGHGFAQN-------QLV 347 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTEEEEEECTTTC-------CEE
T ss_pred CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCeEEEEEecCCC-------EEE
Confidence 8899999998754 23333 47899999999998776654433 444556788889998877 456 999
Q ss_pred EEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCC
Q 046773 367 VRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIG 425 (453)
Q Consensus 367 Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~ 425 (453)
|||..+++++.++.+|.+.|..++++|++.++++++. ++|||||+.+..+.+..+.+..
T Consensus 348 iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~ 407 (420)
T 4gga_A 348 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKA 407 (420)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--------
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccC
Confidence 9999999999999999999999999999999999887 9999999988777666554443
No 74
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.8e-29 Score=266.51 Aligned_cols=272 Identities=13% Similarity=0.085 Sum_probs=219.8
Q ss_pred CCCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCC----eEEEEecCCCCCccccccce-EEEEEEcC----Ce
Q 046773 136 PSDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTR----LHVRTFRPQHSDRLGQFSRA-VSGIIITD----SQ 204 (453)
Q Consensus 136 ~~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg----~~~~tl~gh~~~~~~~~s~~-V~~i~f~g----~~ 204 (453)
+..|... |.|++|++ ++||+++ |++|+|||++++ +++++|.+|.. . |.+++|++ +.
T Consensus 14 ~~~~~~~----v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~--------~~v~~~~~sp~~~~~~ 80 (615)
T 1pgu_A 14 PSTQRNF----TTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGS--------SVVTTVKFSPIKGSQY 80 (615)
T ss_dssp CCCCTTC----CCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTT--------SCEEEEEECSSTTCCE
T ss_pred CCCccCc----eeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCC--------ceEEEEEECcCCCCCE
Confidence 4467633 78899986 6899998 889999999999 99999998764 6 78888754 78
Q ss_pred EEEEeCCCCEEEEEeecC-------C--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCC----CeEEEeeCCCCc
Q 046773 205 LIFATLDGDIHVAVIDDV-------A--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAG----RAFHIWDRQAEE 271 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~-------g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D----~tIrvWD~~tg~ 271 (453)
|++|+.|++|+|||+.+. . ...+..|...+. .++|+|+|++ |++++.| +.|++|| +++
T Consensus 81 l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~~~s~~~~~---l~~~~~~~~~~~~v~~~d--~~~ 151 (615)
T 1pgu_A 81 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS----DISWDFEGRR---LCVVGEGRDNFGVFISWD--SGN 151 (615)
T ss_dssp EEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE----EEEECTTSSE---EEEEECCSSCSEEEEETT--TCC
T ss_pred EEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE----EEEEeCCCCE---EEEeccCCCCccEEEEEE--CCC
Confidence 999999999999999641 1 233444544443 4899999997 7788877 6899999 444
Q ss_pred EEecccccCCcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCCceEEEEeeccC---CeEEEEEEec
Q 046773 272 VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQGMVLGERGYGR---GLYVTSVDVN 345 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~~g~~~---~~~v~~~~~~ 345 (453)
.. ..+.+|...|.+++|+|++ +++++.|++|++||+++++++..+.+|.. .+...+|+++
T Consensus 152 ~~--------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 152 SL--------------GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp EE--------------EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECST
T ss_pred cc--------------eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCC
Confidence 32 3466888999999999876 45557789999999999887777777766 5666677788
Q ss_pred -CCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE-E---ecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEE
Q 046773 346 -AEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF-S---LRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYS 419 (453)
Q Consensus 346 -g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l-~---~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~t 419 (453)
++.+++++.|+ .++||++.+++.+..+ . .|...+..+.++ ++.++++++. ++|++||+.+++++.+
T Consensus 218 ~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 218 SGEFVITVGSDR-------KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp TCCEEEEEETTC-------CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCC-------eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 88999999999 9999999999999888 5 777889999999 8889888887 9999999999999999
Q ss_pred ecccC----CceEEE-EecCCCEEEEE-eCCcEEEEecC
Q 046773 420 FRERI----GEEVIA-FVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 420 L~gh~----~~~V~a-~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+..+. .. +.+ ..+++++|+++ .|+.|++||+.
T Consensus 290 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 290 WTLDKQQLGNQ-QVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp EECCTTCGGGC-EEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EcCCCCcccCc-eeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 98773 34 443 33588999999 99999999974
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-30 Score=289.45 Aligned_cols=205 Identities=10% Similarity=0.061 Sum_probs=157.2
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc-CCeEEEEeCCCCE
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT-DSQLIFATLDGDI 214 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~-g~~LasgS~D~tI 214 (453)
||..+ |+|++|++ ++||+|+.|++|||||..+++++.++. |.. .|.+++|+ ++.|+++|.|++|
T Consensus 15 gh~~~----V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~--------~V~~l~fspg~~L~S~s~D~~v 81 (902)
T 2oaj_A 15 GMSSK----PIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRS--------AIKEMRFVKGIYLVVINAKDTV 81 (902)
T ss_dssp ECSSC----EEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCC--------CEEEEEEETTTEEEEEETTCEE
T ss_pred CCCCC----cEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCC--------CEEEEEEcCCCEEEEEECcCeE
Confidence 78744 88999986 699999999999999999999887764 332 58889887 5669999999999
Q ss_pred EEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeee---ee
Q 046773 215 HVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGW---RM 289 (453)
Q Consensus 215 kvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w---~~ 289 (453)
+|||+++ + +.++. |.+.+. .++|+|++++ |++|+.|++|+|||++++++..- .. + ..| ..
T Consensus 82 ~lWd~~~-~~~~~~~~-~~~~V~----~v~~sp~g~~---l~sgs~dg~V~lwd~~~~~~~~~-~i--~---~~~~~~~~ 146 (902)
T 2oaj_A 82 YVLSLYS-QKVLTTVF-VPGKIT----SIDTDASLDW---MLIGLQNGSMIVYDIDRDQLSSF-KL--D---NLQKSSFF 146 (902)
T ss_dssp EEEETTT-CSEEEEEE-CSSCEE----EEECCTTCSE---EEEEETTSCEEEEETTTTEEEEE-EE--C---CHHHHHTC
T ss_pred EEEECCC-CcEEEEEc-CCCCEE----EEEECCCCCE---EEEEcCCCcEEEEECCCCccccc-ee--c---cccccccc
Confidence 9999987 4 23332 333332 5899999997 88999999999999999874210 00 0 001 23
Q ss_pred eeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCCceEEEEeec------------------cCCeEEEEEEecCCE
Q 046773 290 LTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQGMVLGERGY------------------GRGLYVTSVDVNAEA 348 (453)
Q Consensus 290 l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~~g~------------------~~~~~v~~~~~~g~~ 348 (453)
+.+|.++|.+|+|+|+. +++++.|++| |||+++++++.++.+| ...+...+|+|+|..
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 56889999999999963 4555667899 9999998877666544 233455567788889
Q ss_pred EEEEeCCCccccCcceEEEEEcCCCeeEEE
Q 046773 349 YIVVENRELENQNRRLAIVRRVDTFEEVCR 378 (453)
Q Consensus 349 l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~ 378 (453)
+++++.|+ +|+|||+.+++++..
T Consensus 226 lasgs~Dg-------~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 226 IITIHEDN-------SLVFWDANSGHMIMA 248 (902)
T ss_dssp EEEEETTC-------CEEEEETTTCCEEEE
T ss_pred EEEEECCC-------eEEEEECCCCcEEEE
Confidence 99999999 999999998877653
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.4e-30 Score=256.99 Aligned_cols=232 Identities=12% Similarity=0.107 Sum_probs=177.9
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecCC---cceEEeeecceecCceEEEEeCC--CceeeEEEEeeCCCeEEEee
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDVA---NETRTAHFGSVMDDGVLIDFTGC--SRYWVGLYAGLAGRAFHIWD 266 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g---~~~~~~~~~~v~~~~~~v~Fs~d--g~~~~~LaSgS~D~tIrvWD 266 (453)
.|.+++|+ |++||+||.|++|+|||+.+.. +.++.+|.+.|. .|+|+|+ |++ |+|||.|++|+|||
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~----~v~~~~~~~~~~---l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW----QVAWAHPMYGNI---LASCSYDRKVIIWR 87 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE----EEEECCGGGSSC---EEEEETTSCEEEEC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE----EEEeCCCCCCCE---EEEEECCCEEEEEE
Confidence 68888885 7899999999999999998721 345677877664 4899863 775 89999999999999
Q ss_pred CCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC--c--eEEEEcCCcEEEEECCCCceE---EEEeeccCCeEE
Q 046773 267 RQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH--E--SAVACTSSRVITFDLRNQGMV---LGERGYGRGLYV 339 (453)
Q Consensus 267 ~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~--~--~~vas~d~tIrlWDl~t~~~~---~~~~g~~~~~~v 339 (453)
+++++... ..++.+|...|++|+|+|+ + +++++.|++|+|||+++++.. ....+|...+..
T Consensus 88 ~~~~~~~~------------~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 88 EENGTWEK------------SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp CSSSCCCE------------EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred CCCCcceE------------EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 99875100 1346688999999999986 3 455567899999999976422 112455444433
Q ss_pred EEEEec-----------------CCEEEEEeCCCccccCcceEEEEEcCCC---eeEEEEEecCCCeeEEEEeeCC----
Q 046773 340 TSVDVN-----------------AEAYIVVENRELENQNRRLAIVRRVDTF---EEVCRFSLRADRNVNVMGCMNQ---- 395 (453)
Q Consensus 340 ~~~~~~-----------------g~~l~s~s~dg~~~~~~~~i~Iw~~~tg---~~v~~l~~~~~~v~~~~~~~~~---- 395 (453)
.+++|+ +..+++++.|+ +|+||+..++ +++.++..|.+.|+.+.++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~-------~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~ 228 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN-------LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPT 228 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTS-------BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSC
T ss_pred EEEccccCCccccccccccCccccceEEEecCCC-------eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCC
Confidence 445554 35789999999 9999999765 4667788888889999999976
Q ss_pred CeEEEEeC-CeEEEEECCCC---e-EEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 396 GYALMCVE-GVIRVWEVEGG---E-YMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 396 ~~lls~s~-~tIrlWD~~tG---~-~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.++++++. ++|+|||+.++ + ....+.+|.+. |+ +|+||+++||++ .|++|+||+..
T Consensus 229 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV-VWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSC-EEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCc-EEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 67777776 99999999873 2 23456678887 87 678999999999 99999999964
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.3e-30 Score=287.28 Aligned_cols=293 Identities=7% Similarity=-0.012 Sum_probs=202.5
Q ss_pred CCCCCCCCeEEEEEEecCC---EEEEEeCCCcEEEEECCCCeEEEEecCCCCC----------ccccccceEEEEEEc--
Q 046773 137 SDVDNPDGLTCRCLTLSDL---YLACGFADGAVRLFDLTTRLHVRTFRPQHSD----------RLGQFSRAVSGIIIT-- 201 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~~---~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~----------~~~~~s~~V~~i~f~-- 201 (453)
.+|..+ |++++|+++ +|++|+.|++| |||+.++++++++.+|... ....+...|.+++|+
T Consensus 148 ~~h~~~----V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 148 AARLSP----IVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp SSCCCC----CCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred ccCCCC----eEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 478744 889999973 89999999999 9999999999999876110 000112368888885
Q ss_pred CCeEEEEeCCCCEEEEEeecCCcceEE--------ee-------------ecceecCceEEEEe----CCCceeeEEEEe
Q 046773 202 DSQLIFATLDGDIHVAVIDDVANETRT--------AH-------------FGSVMDDGVLIDFT----GCSRYWVGLYAG 256 (453)
Q Consensus 202 g~~LasgS~D~tIkvWd~~~~g~~~~~--------~~-------------~~~v~~~~~~v~Fs----~dg~~~~~LaSg 256 (453)
|..|++|+.|++|++||+.+ | ..+. +| ...| ..|+|+ ||+.. .|++|
T Consensus 223 g~~lasgs~Dg~i~lWd~~~-g-~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V----~~v~w~~~~~pd~~~--ll~sg 294 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANS-G-HMIMARTVFETEINVPQPDYIRDSSTNAAKI----SKVYWMCENNPEYTS--LLISH 294 (902)
T ss_dssp SSEEEEEETTCCEEEEETTT-C-CEEEEECSSCSCTTSCCTTCCCCCSSCCCEE----EEEEEEECSSTTEEE--EEEEE
T ss_pred CCEEEEEECCCeEEEEECCC-C-cEEEEEeecccccCCCCCcCCCCCccccCCe----eEEEEEecCCCCCCE--EEEeC
Confidence 67899999999999999976 4 1111 11 1111 124452 33211 13344
Q ss_pred ----------------------------------------------------------------------------eCCC
Q 046773 257 ----------------------------------------------------------------------------LAGR 260 (453)
Q Consensus 257 ----------------------------------------------------------------------------S~D~ 260 (453)
+.|+
T Consensus 295 ~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg 374 (902)
T 2oaj_A 295 KSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNG 374 (902)
T ss_dssp ECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTS
T ss_pred CCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCC
Confidence 4445
Q ss_pred eEEEeeCCCCcEEec----c-cccCC-ccee---------------------eeeeeeeeccceeEEEEcCCc--eEEEE
Q 046773 261 AFHIWDRQAEEVFVG----G-DLTDH-NTVM---------------------GWRMLTEFTEFVGRVRVTSHE--SAVAC 311 (453)
Q Consensus 261 tIrvWD~~tg~~~~g----~-~l~~~-~~v~---------------------~w~~l~~h~~~v~~v~~s~~~--~~vas 311 (453)
+|++||+.+|+.... + .+..+ ..+. .-..|.+|...+.+|+|+|++ +++++
T Consensus 375 ~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs 454 (902)
T 2oaj_A 375 EIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH 454 (902)
T ss_dssp CEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE
T ss_pred cEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec
Confidence 555555544431100 0 00000 0000 001355666677777788766 45567
Q ss_pred cCCcEEEEECCCCceE----EEE--e-----eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCC-------
Q 046773 312 TSSRVITFDLRNQGMV----LGE--R-----GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTF------- 373 (453)
Q Consensus 312 ~d~tIrlWDl~t~~~~----~~~--~-----g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg------- 373 (453)
.|++|||||+.++... ... . +|...+...+|+|++..+|+++.|+ +|+||+++++
T Consensus 455 ~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg-------tV~lwd~~~~~~~~~~~ 527 (902)
T 2oaj_A 455 SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG-------DVVLFKYEVNQFYSVEN 527 (902)
T ss_dssp TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS-------CEEEEEEEECCC-----
T ss_pred CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc-------EEEEEEecCccccCccc
Confidence 8999999999987321 111 1 5655666677888899999999999 9999999876
Q ss_pred --------------------------------------eeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC
Q 046773 374 --------------------------------------EEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 374 --------------------------------------~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG 414 (453)
+++.++..|...|.+++|+|++ ++++++. ++|+|||++++
T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 528 RPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp ----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred cCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 3467788888899999999999 8888887 99999999998
Q ss_pred eEEE-----Eec-ccCCceEE--EEe-----cCC---CEEEEE-eCCcEEEEec
Q 046773 415 EYMY-----SFR-ERIGEEVI--AFV-----GDD---RHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 415 ~~l~-----tL~-gh~~~~V~--a~s-----~d~---~~lasg-~D~~IklWDl 451 (453)
+.++ .+. ||.+. |+ +|+ ||| ++|++| .|++|++||+
T Consensus 607 ~~~~~~~~~~~~~gh~~~-V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 607 AIIYMENIREISGAQSAC-VTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEGGGTCSSCCCC-EEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred eEEEEeehhHhccccccc-eEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 7765 343 89888 88 788 885 799999 9999999997
No 78
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.3e-29 Score=260.14 Aligned_cols=237 Identities=13% Similarity=0.174 Sum_probs=190.9
Q ss_pred CCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEE
Q 046773 138 DVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVA 217 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvW 217 (453)
||..+ |.|++|++++||+|+.|++|+|||+.+++++.++.+|.. .|.+++|++..|++|+.|++|++|
T Consensus 171 ~h~~~----v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--------~v~~l~~~~~~l~s~s~dg~i~vw 238 (435)
T 1p22_A 171 GHTGS----VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE--------AVLHLRFNNGMMVTCSKDRSIAVW 238 (435)
T ss_dssp CCSSC----EEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCS--------CEEEEECCTTEEEEEETTSCEEEE
T ss_pred CCCCc----EEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC--------cEEEEEEcCCEEEEeeCCCcEEEE
Confidence 78744 899999999999999999999999999999999998654 688899999999999999999999
Q ss_pred EeecCC-c---ceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 218 VIDDVA-N---ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 218 d~~~~g-~---~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
|+.+.. . ..+.+|...+. .++| ++++ |++|+.|++|+|||+++++.+ .++.+|
T Consensus 239 d~~~~~~~~~~~~~~~~~~~v~----~~~~--~~~~---l~s~~~dg~i~vwd~~~~~~~--------------~~~~~~ 295 (435)
T 1p22_A 239 DMASPTDITLRRVLVGHRAAVN----VVDF--DDKY---IVSASGDRTIKVWNTSTCEFV--------------RTLNGH 295 (435)
T ss_dssp ECSSSSCCEEEEEECCCSSCEE----EEEE--ETTE---EEEEETTSEEEEEETTTCCEE--------------EEEECC
T ss_pred eCCCCCCceeeeEecCCCCcEE----EEEe--CCCE---EEEEeCCCeEEEEECCcCcEE--------------EEEcCC
Confidence 998722 2 33444554443 3666 5554 889999999999999998853 346688
Q ss_pred ccceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCC
Q 046773 294 TEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTF 373 (453)
Q Consensus 294 ~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg 373 (453)
...|.++.++++.+++++.|++|++||+++++++..+.+|. ..|.++.++++.+++++.|+ +|+|||+.++
T Consensus 296 ~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~~~~l~sg~~dg-------~i~vwd~~~~ 366 (435)
T 1p22_A 296 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE--ELVRCIRFDNKRIVSGAYDG-------KIKVWDLVAA 366 (435)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEECCSSEEEEEETTS-------CEEEEEHHHH
T ss_pred CCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCc--CcEEEEEecCCEEEEEeCCC-------cEEEEECCCC
Confidence 89999999988777888889999999999998887776654 45788888999999999999 9999998766
Q ss_pred e---------eEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe
Q 046773 374 E---------EVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 374 ~---------~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL 420 (453)
+ ++..+..|...+..+.+ ++.++++++. ++|+|||+.++......
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE 421 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----------
T ss_pred CCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC
Confidence 5 78888888888888877 6778888776 99999999987665443
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.1e-28 Score=239.02 Aligned_cols=240 Identities=13% Similarity=0.141 Sum_probs=191.3
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEE
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIH 215 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIk 215 (453)
+|... |+|++|++ ++|||||.|++|+|||++++++++++.+|.. .+.++++++..|++|+.|+.++
T Consensus 65 ~~~~~----V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~--------~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 65 QPGEY----ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA--------RVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp STTCC----EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--------CEEEEEEETTEEEEEETTSEEE
T ss_pred CCCCe----EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccc--------eEEEeecCCCEEEEEecCCceE
Confidence 66633 89999986 6999999999999999999999999998764 4667888999999999999999
Q ss_pred EEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 216 VAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 216 vWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
+|+..... +..+.+|...+. .+.|+++|+. |++++.|++|+|||+++++... ........|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~~----------~~~~~~~~~ 195 (318)
T 4ggc_A 133 HHDVRVAEHHVATLSGHSQEVC----GLRWAPDGRH---LASGGNDNLVNVWPSAPGEGGW----------VPLQTFTQH 195 (318)
T ss_dssp EEETTSSSCEEEEEECCSSCEE----EEEECTTSSE---EEEEETTSCEEEEESSCBTTBS----------CCSEEECCC
T ss_pred eeecCCCceeEEEEcCccCceE----EEEEcCCCCE---EEEEecCcceeEEECCCCcccc----------cceeeeccc
Confidence 99987622 344555655443 4789999986 8899999999999999876210 001234456
Q ss_pred ccceeEEEEcCCc---eEEEE--cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe--CCCccccCcceEE
Q 046773 294 TEFVGRVRVTSHE---SAVAC--TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE--NRELENQNRRLAI 366 (453)
Q Consensus 294 ~~~v~~v~~s~~~---~~vas--~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s--~dg~~~~~~~~i~ 366 (453)
...|.++.+.+.. +.+++ .+++|+|||.++..+.... .+.......++.+.++.+++++ .|+ +|+
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~-------~i~ 267 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQN-------QLV 267 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTC-------CEE
T ss_pred CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCC-------EEE
Confidence 6788888887643 23333 3578999999987765443 3445566777889999988876 456 999
Q ss_pred EEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC
Q 046773 367 VRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 367 Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG 414 (453)
|||+.+++++.++.+|.+.|..+.++|++.++++++. ++|||||+.+.
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999999999999999999999887 99999999754
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=4.2e-28 Score=237.04 Aligned_cols=256 Identities=13% Similarity=0.128 Sum_probs=190.4
Q ss_pred EEeCCCcEEE----EECCCCeEEEEecCCCCCccccccceEEEEEEc---CCeEEEEeCCCCEEEEEeecCC------cc
Q 046773 159 CGFADGAVRL----FDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFATLDGDIHVAVIDDVA------NE 225 (453)
Q Consensus 159 SGS~D~TIrl----WD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~---g~~LasgS~D~tIkvWd~~~~g------~~ 225 (453)
||...++..+ ...++.++..||+||.. .|.+|+|+ ++.|+|||.|++|+|||+.... ..
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~--------~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~ 80 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHNG--------WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQR 80 (340)
T ss_dssp -----------------CEEEEEEEECCCSS--------CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEE
T ss_pred cccCCCCccEEEEEccCCceEEEEEECCccC--------CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeE
Confidence 4444454333 33455567789999875 68999986 4589999999999999997621 23
Q ss_pred eEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC
Q 046773 226 TRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH 305 (453)
Q Consensus 226 ~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~ 305 (453)
++++|...|. .++|+|||++ |++|+.|++|++|+...+.... ....+...+..+.+++.
T Consensus 81 ~l~~h~~~V~----~~~~s~dg~~---l~s~~~d~~i~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 139 (340)
T 4aow_A 81 ALRGHSHFVS----DVVISSDGQF---ALSGSWDGTLRLWDLTTGTTTR--------------RFVGHTKDVLSVAFSSD 139 (340)
T ss_dssp EECCCSSCEE----EEEECTTSSE---EEEEETTSEEEEEETTTTEEEE--------------EEECCSSCEEEEEECTT
T ss_pred EEeCCCCCEE----EEEECCCCCE---EEEEcccccceEEeecccceee--------------eecCCCCceeEEEEeec
Confidence 4556666554 4899999996 8899999999999998877321 12334455666777764
Q ss_pred c--eEEEEcCCcEEEEECCCCceEEE-EeeccCCeEEEEEEecC--CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE
Q 046773 306 E--SAVACTSSRVITFDLRNQGMVLG-ERGYGRGLYVTSVDVNA--EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS 380 (453)
Q Consensus 306 ~--~~vas~d~tIrlWDl~t~~~~~~-~~g~~~~~~v~~~~~~g--~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~ 380 (453)
+ +++++.|+.+++||+........ ..+|...+...+|++++ ..+++++.|+ +++||+..+++++..+.
T Consensus 140 ~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~-------~i~i~d~~~~~~~~~~~ 212 (340)
T 4aow_A 140 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK-------LVKVWNLANCKLKTNHI 212 (340)
T ss_dssp SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS-------CEEEEETTTTEEEEEEC
T ss_pred CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC-------EEEEEECCCCceeeEec
Confidence 4 45667789999999987544332 25566555556666554 3567888888 99999999999999999
Q ss_pred ecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 381 LRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 381 ~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
.|...|..+.++|++.++++++. ++|+|||+.++++++.+.++. . |. +++|++..|+++.|++|+|||+.
T Consensus 213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~-v~~~~~~~~~~~~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-I-INALCFSPNRYWLCAATGPSIKIWDLE 285 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-C-EEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-e-EEeeecCCCCceeeccCCCEEEEEECC
Confidence 99888999999999999998887 999999999999999998664 4 55 67788887776699999999974
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.7e-30 Score=298.95 Aligned_cols=265 Identities=15% Similarity=0.120 Sum_probs=221.7
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~ 222 (453)
+.|++|++ +++++|+.|++|++||+.+++++.++.+|.. .|.+++|+ ++.|++++.|++|++||+.+
T Consensus 964 i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~--------~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~- 1034 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKK--------AVRHIQFTADGKTLISSSEDSVIQVWNWQT- 1034 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSS--------CCCCEEECSSSSCEEEECSSSBEEEEETTT-
T ss_pred EEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCC--------ceEEEEECCCCCEEEEEcCCCEEEEEECCC-
Confidence 78888886 6999999999999999999999999998764 45667774 67899999999999999987
Q ss_pred C-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 223 A-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 223 g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
+ ......|...+. .++|+|+++ +++++.|++|++||+.+++.. ..+.+|...|.+++
T Consensus 1035 ~~~~~~~~~~~~v~----~~~~~~~~~----l~~~~~dg~v~vwd~~~~~~~--------------~~~~~~~~~v~~~~ 1092 (1249)
T 3sfz_A 1035 GDYVFLQAHQETVK----DFRLLQDSR----LLSWSFDGTVKVWNVITGRIE--------------RDFTCHQGTVLSCA 1092 (1249)
T ss_dssp TEEECCBCCSSCEE----EEEECSSSE----EEEEESSSEEEEEETTTTCCC--------------EEEECCSSCCCCEE
T ss_pred CceEEEecCCCcEE----EEEEcCCCc----EEEEECCCcEEEEECCCCcee--------------EEEcccCCcEEEEE
Confidence 4 222334444432 489999876 678999999999999998832 34567888999999
Q ss_pred EcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 302 VTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 302 ~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
|+|++ +++++.|++|++||+.+++++..+.+|...+...+|++++..+++++.|+ +|+||++.+++++..+
T Consensus 1093 ~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg-------~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1093 ISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG-------EIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp ECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTS-------CCCEEESSSSCCCCCC
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCC-------EEEEEECCCCceEEEe
Confidence 99876 46667789999999999887666677777666677888899999999999 9999999998876554
Q ss_pred ---------EecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEE
Q 046773 380 ---------SLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIH 447 (453)
Q Consensus 380 ---------~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~Ik 447 (453)
..|...+..+.|++++.++++++ ++|++||+.+|+++.++.+|.+. |+ +|+||+++|+++ .||.|+
T Consensus 1166 ~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-g~v~vwd~~~g~~~~~~~~~~~~-i~~~~~s~dg~~l~~~~~dg~v~ 1243 (1249)
T 3sfz_A 1166 APISVEEGTATHGGWVTDVCFSPDSKTLVSAG-GYLKWWNVATGDSSQTFYTNGTN-LKKIHVSPDFRTYVTVDNLGILY 1243 (1249)
T ss_dssp CCCC-------CCSCCCEEEECTTSSCEEEES-SSEEEBCSSSCBCCCCCCCSSCC-CCCCEECSSSCCEEEECTTCCEE
T ss_pred ccccccccccccCceEEEEEECCCCCEEEECC-CeEEEEECCCCceeeeeeccCCc-ccEEEECCCCCEEEEecCCcEEE
Confidence 55677799999999999887665 89999999999999999999887 76 789999999999 999999
Q ss_pred EEec
Q 046773 448 LWDF 451 (453)
Q Consensus 448 lWDl 451 (453)
+|++
T Consensus 1244 vw~l 1247 (1249)
T 3sfz_A 1244 ILQV 1247 (1249)
T ss_dssp EECC
T ss_pred EEee
Confidence 9997
No 82
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.6e-28 Score=238.82 Aligned_cols=268 Identities=12% Similarity=0.108 Sum_probs=209.0
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~ 222 (453)
|.+++|++ ++|+++..++.+.+|+.........+.+|.. .|.+++|+ ++.|++++ |++|+|||+++.
T Consensus 12 v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGE--------VVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp CCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSS--------CCCEEEECSSSSEEEEEC-BSEEEEEETTST
T ss_pred eeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCC--------ceEEEEEecCCcEEEEcC-CCeEEEEECCCC
Confidence 67888875 6888888777777777666555444445543 56777775 67899988 999999999763
Q ss_pred C-cce---EE--eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccc
Q 046773 223 A-NET---RT--AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEF 296 (453)
Q Consensus 223 g-~~~---~~--~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~ 296 (453)
. ... +. .|...+. .++|+|++++ |++|+.|++|++||+++++... ...+.+|...
T Consensus 83 ~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~~~~~d~~i~~~d~~~~~~~~------------~~~~~~~~~~ 143 (337)
T 1gxr_A 83 GNKSPVSQLDCLNRDNYIR----SCKLLPDGCT---LIVGGEASTLSIWDLAAPTPRI------------KAELTSSAPA 143 (337)
T ss_dssp TCCSCSEEEECSCTTSBEE----EEEECTTSSE---EEEEESSSEEEEEECCCC--EE------------EEEEECSSSC
T ss_pred CceeeeecccccCCCCcEE----EEEEcCCCCE---EEEEcCCCcEEEEECCCCCcce------------eeecccCCCc
Confidence 2 122 22 2333332 4899999986 7899999999999999887210 1345678888
Q ss_pred eeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe
Q 046773 297 VGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE 374 (453)
Q Consensus 297 v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~ 374 (453)
+.+++|+|++ +++++.|++|++||+++++++....+|...+...+++++++.+++++.|+ .+++||..+++
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~i~~~d~~~~~ 216 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN-------TVRSWDLREGR 216 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------EEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC-------cEEEEECCCCc
Confidence 9999999876 45556789999999999877766666766666666778888999999999 99999999998
Q ss_pred eEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEe
Q 046773 375 EVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWD 450 (453)
Q Consensus 375 ~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWD 450 (453)
.+..+. ++..+..+.+++++.++++++. +.|++||+.+++. ..+.+|.+. |. +|+||+++|+++ .|++|++||
T Consensus 217 ~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 217 QLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESC-VLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSC-EEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccc-eeEEEECCCCCEEEEecCCCcEEEEE
Confidence 887775 4556889999999999888887 9999999999876 467788888 77 678999999999 999999999
Q ss_pred cC
Q 046773 451 FG 452 (453)
Q Consensus 451 l~ 452 (453)
+.
T Consensus 294 ~~ 295 (337)
T 1gxr_A 294 TP 295 (337)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 83
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.2e-29 Score=257.05 Aligned_cols=268 Identities=12% Similarity=0.090 Sum_probs=204.1
Q ss_pred EEEEecCCE---EEEEeCCCcEEEEECCCCe----EEEEecCCCCCccccccceEEEEEEc---CCeEEEEeCCCCEEEE
Q 046773 148 RCLTLSDLY---LACGFADGAVRLFDLTTRL----HVRTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFATLDGDIHVA 217 (453)
Q Consensus 148 ~~lafs~~~---LaSGS~D~TIrlWD~~tg~----~~~tl~gh~~~~~~~~s~~V~~i~f~---g~~LasgS~D~tIkvW 217 (453)
.++++++++ +++|+.|++|+|||+.+.. .+.++.+|.. .|.+++|+ +..|++|+.|++|+||
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~--------~V~~~~~~p~~~~~l~s~s~dg~v~vw 109 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTA--------PVLDIAWCPHNDNVIASGSEDCTVMVW 109 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSS--------CEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCC--------CEEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 468888864 4568999999999996652 3456667654 68889884 5789999999999999
Q ss_pred EeecCC--------cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeee
Q 046773 218 VIDDVA--------NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRM 289 (453)
Q Consensus 218 d~~~~g--------~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~ 289 (453)
|+.+.+ +..+.+|...+. .++|+|+++. .|++|+.|++|+|||+++++.. .+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~~p~~~~--~l~s~~~dg~i~iwd~~~~~~~--------------~~ 169 (402)
T 2aq5_A 110 EIPDGGLVLPLREPVITLEGHTKRVG----IVAWHPTAQN--VLLSAGCDNVILVWDVGTGAAV--------------LT 169 (402)
T ss_dssp ECCTTCCSSCBCSCSEEEECCSSCEE----EEEECSSBTT--EEEEEETTSCEEEEETTTTEEE--------------EE
T ss_pred EccCCCCccccCCceEEecCCCCeEE----EEEECcCCCC--EEEEEcCCCEEEEEECCCCCcc--------------EE
Confidence 998731 345566766553 4899999842 3889999999999999998843 23
Q ss_pred e--eeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEE-eeccCC-eEEEEEEecCCEEEEE---eCCCcccc
Q 046773 290 L--TEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGE-RGYGRG-LYVTSVDVNAEAYIVV---ENRELENQ 360 (453)
Q Consensus 290 l--~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~-~g~~~~-~~v~~~~~~g~~l~s~---s~dg~~~~ 360 (453)
+ .+|.+.|.+++|+|++ +++++.|++|++||+++++++... .+|... ....++++++..++++ +.++
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~---- 245 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER---- 245 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE----
T ss_pred EecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc----
Confidence 4 5788999999999876 456677899999999998877665 566543 4456678888888887 5677
Q ss_pred CcceEEEEEcCCCee-EEEEEe-cCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeE-EEEecccC--CceEE--EE
Q 046773 361 NRRLAIVRRVDTFEE-VCRFSL-RADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEY-MYSFRERI--GEEVI--AF 431 (453)
Q Consensus 361 ~~~~i~Iw~~~tg~~-v~~l~~-~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~-l~tL~gh~--~~~V~--a~ 431 (453)
.++|||..+++. +..... +...+..+.+++++.++++++ . ++|+|||+.+++. +..+..|. +. |. +|
T Consensus 246 ---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~-v~~~~~ 321 (402)
T 2aq5_A 246 ---QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKES-QRGMGY 321 (402)
T ss_dssp ---EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSC-CSEEEE
T ss_pred ---eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCc-ccceEE
Confidence 999999998654 334432 445688899999999987554 3 9999999999874 66666553 55 65 67
Q ss_pred ecCCCEEEEEeCCcEEEEecC
Q 046773 432 VGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 432 s~d~~~lasg~D~~IklWDl~ 452 (453)
+||+.+++++ |+.+++|++.
T Consensus 322 sp~~~~~~s~-~~~~~~~~l~ 341 (402)
T 2aq5_A 322 MPKRGLEVNK-CEIARFYKLH 341 (402)
T ss_dssp CCGGGSCGGG-TEEEEEEEEE
T ss_pred ecccccceec-ceeEEEEEcC
Confidence 8999887754 6699999974
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.8e-28 Score=245.84 Aligned_cols=238 Identities=13% Similarity=0.116 Sum_probs=189.8
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCC-
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVA- 223 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g- 223 (453)
|+|++|++ ++||+|+.|++|+|||+.++++++++.+|.. .|.+++|+++.|++|+.|++|++||+...+
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA--------RVGCLSWNRHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC--------ceEEEEECCCEEEEEcCCCCEEEEecccCcc
Confidence 88999976 6999999999999999999999999998754 688899999999999999999999998523
Q ss_pred -cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEE
Q 046773 224 -NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRV 302 (453)
Q Consensus 224 -~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~ 302 (453)
...+..|.+.+. .++|+|++++ |++|+.|++|+|||+++++.. .++.+|..+|.+++|
T Consensus 209 ~~~~~~~~~~~v~----~~~~~~~~~~---l~s~~~d~~v~iwd~~~~~~~--------------~~~~~~~~~v~~~~~ 267 (401)
T 4aez_A 209 QIGTLQGHSSEVC----GLAWRSDGLQ---LASGGNDNVVQIWDARSSIPK--------------FTKTNHNAAVKAVAW 267 (401)
T ss_dssp EEEEEECCSSCEE----EEEECTTSSE---EEEEETTSCEEEEETTCSSEE--------------EEECCCSSCCCEEEE
T ss_pred eeeEEcCCCCCee----EEEEcCCCCE---EEEEeCCCeEEEccCCCCCcc--------------EEecCCcceEEEEEE
Confidence 455666766554 4899999986 889999999999999998743 245678899999999
Q ss_pred cCCc--eEEEE---cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe--CCCccccCcceEEEEEcCCCee
Q 046773 303 TSHE--SAVAC---TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE--NRELENQNRRLAIVRRVDTFEE 375 (453)
Q Consensus 303 s~~~--~~vas---~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s--~dg~~~~~~~~i~Iw~~~tg~~ 375 (453)
+|++ +++++ .|++|++||+++++++.... +...+...++++++..+++++ .++ .++||++.+++.
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg-------~i~v~~~~~~~~ 339 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDN-------NLSIWSYSSSGL 339 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTC-------EEEEEEEETTEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCC-------cEEEEecCCccc
Confidence 9854 44433 37899999999988776653 334555566778888888865 677 999999999765
Q ss_pred EEE--EEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEec
Q 046773 376 VCR--FSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 376 v~~--l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~ 421 (453)
... +..|...+..+.+++++.++++++. ++|++||+.+++++..+.
T Consensus 340 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 340 TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 544 5567777999999999999998887 999999999999887653
No 85
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=7.2e-29 Score=249.31 Aligned_cols=245 Identities=11% Similarity=0.077 Sum_probs=164.8
Q ss_pred EEEEEeCCCcEEEEECCCC---eEEEEecCCCCCccccc-----------------cceEEEEEEcCC------eEEEEe
Q 046773 156 YLACGFADGAVRLFDLTTR---LHVRTFRPQHSDRLGQF-----------------SRAVSGIIITDS------QLIFAT 209 (453)
Q Consensus 156 ~LaSGS~D~TIrlWD~~tg---~~~~tl~gh~~~~~~~~-----------------s~~V~~i~f~g~------~LasgS 209 (453)
-|++++ ..+|+||++.++ ++++++.+|...++... ...|++|+|+++ .+++++
T Consensus 56 ~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 366776 559999999999 99999998765322110 124455554433 345544
Q ss_pred CCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEee--CCCeEEEeeCC-CCcEEecccccCCcceee
Q 046773 210 LDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL--AGRAFHIWDRQ-AEEVFVGGDLTDHNTVMG 286 (453)
Q Consensus 210 ~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS--~D~tIrvWD~~-tg~~~~g~~l~~~~~v~~ 286 (453)
. +++||++.+ |+. +.+++ .|++|++|++. +|+.+
T Consensus 135 ~--~~~v~~l~~-------------------------g~l---v~ss~~g~d~~V~~~~~s~dG~~~------------- 171 (356)
T 2w18_A 135 N--IKAVLGLTK-------------------------RRL---VSSSGTLSDQQVEVMTFAEDGGGK------------- 171 (356)
T ss_dssp E--EEEEEEETT-------------------------TEE---EEEESSSTTCEEEEEEECTTSCEE-------------
T ss_pred C--eEEEEecCC-------------------------CcE---EEecccCCCCcEEEEEECCCCcee-------------
Confidence 2 255555432 221 22322 48888888884 46643
Q ss_pred eeeeeeeccceeEEEEcC---Cc--eEEEEcCCcEEEEECCCCceEEEEeecc-C--CeEEEEEEecCCEEEE-------
Q 046773 287 WRMLTEFTEFVGRVRVTS---HE--SAVACTSSRVITFDLRNQGMVLGERGYG-R--GLYVTSVDVNAEAYIV------- 351 (453)
Q Consensus 287 w~~l~~h~~~v~~v~~s~---~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~-~--~~~v~~~~~~g~~l~s------- 351 (453)
..+.+|...+..++|++ ++ ++++|.|++|||||++||++++++.+|. + .+...+|+|+|..+++
T Consensus 172 -~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 172 -ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK 250 (356)
T ss_dssp -EEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----
T ss_pred -eeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc
Confidence 24567888888888886 22 5556788999999999999988875432 2 2233468888877644
Q ss_pred -----EeCCCccccCcceEEEEEcCCCeeEEEEEec-CCC--eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecc
Q 046773 352 -----VENRELENQNRRLAIVRRVDTFEEVCRFSLR-ADR--NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRE 422 (453)
Q Consensus 352 -----~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~-~~~--v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~g 422 (453)
++.|+ ++++|+..+++++..+... |++ ...+.++.++..+++++. +||||||+++|+|+++|++
T Consensus 251 w~laSGs~D~-------tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g 323 (356)
T 2w18_A 251 ESESLRSPVF-------QLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP 323 (356)
T ss_dssp -------CCE-------EEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred ceeeccCCCc-------EEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC
Confidence 44455 9999999999988766421 211 122333444566677765 9999999999999999999
Q ss_pred cCCceE--EEEecCCCEEEEE-eCCcEEEEecC
Q 046773 423 RIGEEV--IAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 423 h~~~~V--~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
|.+..+ -+|+|||++|+|| .|++|||||+.
T Consensus 324 H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 324 VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp C--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 987623 2799999999999 99999999963
No 86
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.9e-28 Score=266.88 Aligned_cols=237 Identities=14% Similarity=0.171 Sum_probs=191.4
Q ss_pred EEEecCCCCCccccccceEEEEEEc---CCeEEEEeCCCCEEEEEeecCC------cceEEeeecceecCceEEEEeCCC
Q 046773 177 VRTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFATLDGDIHVAVIDDVA------NETRTAHFGSVMDDGVLIDFTGCS 247 (453)
Q Consensus 177 ~~tl~gh~~~~~~~~s~~V~~i~f~---g~~LasgS~D~tIkvWd~~~~g------~~~~~~~~~~v~~~~~~v~Fs~dg 247 (453)
...|++|.. .|.+|+|+ ++.|+|||.|++|+||++.... ...+.+|...|. .|+|+|+|
T Consensus 375 ~~~l~~H~~--------~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~----~v~~s~~g 442 (694)
T 3dm0_A 375 KGTMRAHTD--------MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE----DVVLSSDG 442 (694)
T ss_dssp EEEEECCSS--------CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE----EEEECTTS
T ss_pred hhhcccCCc--------eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE----EEEECCCC
Confidence 456888765 68889986 3579999999999999987521 234667776654 48999999
Q ss_pred ceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCc
Q 046773 248 RYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQG 325 (453)
Q Consensus 248 ~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~ 325 (453)
++ |+|||.|++|+|||+.+++.. +.+.+|...|.+|+|+|++ ++++|.|++|||||+...
T Consensus 443 ~~---l~sgs~Dg~v~vwd~~~~~~~--------------~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~- 504 (694)
T 3dm0_A 443 QF---ALSGSWDGELRLWDLAAGVST--------------RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE- 504 (694)
T ss_dssp SE---EEEEETTSEEEEEETTTTEEE--------------EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC-
T ss_pred CE---EEEEeCCCcEEEEECCCCcce--------------eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-
Confidence 96 889999999999999998743 3467899999999999876 566678899999998754
Q ss_pred eEEEE----eeccCCeEEEEEEecC--CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEE
Q 046773 326 MVLGE----RGYGRGLYVTSVDVNA--EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYAL 399 (453)
Q Consensus 326 ~~~~~----~g~~~~~~v~~~~~~g--~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~ll 399 (453)
+.... .+|...+...+|++++ ..+++++.|+ +|+|||+.+++++..+..|...+..+.+++++.+++
T Consensus 505 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-------~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~ 577 (694)
T 3dm0_A 505 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-------TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA 577 (694)
T ss_dssp EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-------eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEE
Confidence 43332 2344444444455554 4689999999 999999999999999999988899999999999999
Q ss_pred EEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 400 MCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 400 s~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
+++. ++|+|||+.++++++.+..+. . |. +|+|++.+|+++.|+.|+|||+.
T Consensus 578 sg~~Dg~i~iwd~~~~~~~~~~~~~~-~-v~~~~~sp~~~~l~~~~~~~i~iwd~~ 631 (694)
T 3dm0_A 578 SGGKDGVVLLWDLAEGKKLYSLEANS-V-IHALCFSPNRYWLCAATEHGIKIWDLE 631 (694)
T ss_dssp EEETTSBCEEEETTTTEEEECCBCSS-C-EEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred EEeCCCeEEEEECCCCceEEEecCCC-c-EEEEEEcCCCcEEEEEcCCCEEEEECC
Confidence 8887 999999999999999987553 4 55 78899999988888889999974
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2.3e-29 Score=247.58 Aligned_cols=244 Identities=8% Similarity=0.072 Sum_probs=186.4
Q ss_pred EEEEEecCC------EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc---CCeEEEEeCCCCEEEE
Q 046773 147 CRCLTLSDL------YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFATLDGDIHVA 217 (453)
Q Consensus 147 v~~lafs~~------~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~---g~~LasgS~D~tIkvW 217 (453)
|+|++|+++ +||+|+.|++|+|||+.++++++++.+|.. .|.+++|+ +..|++|+.|++|+||
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~--------~i~~~~~~~~~~~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGN--------AINELKFHPRDPNLLLSVSKDHALRLW 143 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCS--------CEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCC--------cEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 788998765 899999999999999999999999998754 68888885 5689999999999999
Q ss_pred EeecCC--cceE---EeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEE---eccc-c-cC-------
Q 046773 218 VIDDVA--NETR---TAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVF---VGGD-L-TD------- 280 (453)
Q Consensus 218 d~~~~g--~~~~---~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~---~g~~-l-~~------- 280 (453)
|+.+ + ...+ ..|...+. .++|+|++++ |++|+.|++|+|||+++++.. .... . ++
T Consensus 144 d~~~-~~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (366)
T 3k26_A 144 NIQT-DTLVAIFGGVEGHRDEVL----SADYDLLGEK---IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFI 215 (366)
T ss_dssp ETTT-TEEEEEECSTTSCSSCEE----EEEECTTSSE---EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCC
T ss_pred Eeec-CeEEEEecccccccCcee----EEEECCCCCE---EEEecCCCCEEEEECCCCccccccceeEEecCCCCccccc
Confidence 9987 4 2222 23544443 4899999986 889999999999999987621 1100 0 00
Q ss_pred --CcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCCce--------------EEEEeeccCCeEEEEEEe
Q 046773 281 --HNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGM--------------VLGERGYGRGLYVTSVDV 344 (453)
Q Consensus 281 --~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~--------------~~~~~g~~~~~~v~~~~~ 344 (453)
......+..+.+|...|.+++|+++.+++++.|++|++||++++.+ +....+|...+...+|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (366)
T 3k26_A 216 SQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM 295 (366)
T ss_dssp CEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE
T ss_pred ceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC
Confidence 0000112345568899999999976666667789999999998754 333455554454556788
Q ss_pred c--CCEEEEEeCCCccccCcceEEEEEcCCCe----eEEEEEec--CCCeeEEEEeeCCCeEEEEeC-CeEEEEECCC
Q 046773 345 N--AEAYIVVENRELENQNRRLAIVRRVDTFE----EVCRFSLR--ADRNVNVMGCMNQGYALMCVE-GVIRVWEVEG 413 (453)
Q Consensus 345 ~--g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~----~v~~l~~~--~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~t 413 (453)
+ +..+++++.|+ .|+||++++++ .+..+..+ ...+..+.+++++.++++++. ++|+|||+.+
T Consensus 296 ~~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 296 DFWQKMLALGNQVG-------KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CTTSSEEEEECTTS-------CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCcEEEEEecCC-------cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 8 89999999999 99999999875 34466666 567999999999999998887 9999999864
No 88
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-28 Score=242.21 Aligned_cols=238 Identities=10% Similarity=0.047 Sum_probs=184.9
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECC--CCeEEEEecCCCCCccccccceEEEEEEc----CCeEEEEe
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLT--TRLHVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLIFAT 209 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~--tg~~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~LasgS 209 (453)
||..+ |+|++|++ ++||+|+.|++|+|||+. ++++++++.+|.. .|.+++|+ ++.|++|+
T Consensus 9 ~h~~~----v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 9 AHNEL----IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG--------PVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp ECCCC----EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--------CEEEEEECCGGGCSEEEEEE
T ss_pred CCccc----EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCC--------cEEEEEeCCCCCCCEEEEec
Confidence 79855 88999985 699999999999999998 7788899998754 68889886 78999999
Q ss_pred CCCCEEEEEeecCC----cceEEeeecceecCceEEEEeCC--CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcc
Q 046773 210 LDGDIHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGC--SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 210 ~D~tIkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~d--g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
.|++|+|||+.+ + ...+..|...+. .++|+|+ +++ |++++.|++|+|||++++....
T Consensus 77 ~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~----~~~~~~~~~~~~---l~~~~~d~~i~v~d~~~~~~~~--------- 139 (379)
T 3jrp_A 77 YDGKVLIWKEEN-GRWSQIAVHAVHSASVN----SVQWAPHEYGPL---LLVASSDGKVSVVEFKENGTTS--------- 139 (379)
T ss_dssp TTSCEEEEEEET-TEEEEEEEECCCSSCEE----EEEECCGGGCSE---EEEEETTSEEEEEECCTTSCCC---------
T ss_pred cCCEEEEEEcCC-CceeEeeeecCCCcceE----EEEeCCCCCCCE---EEEecCCCcEEEEecCCCCcee---------
Confidence 999999999987 4 122333444433 4899999 875 8899999999999999875110
Q ss_pred eeeeeeeeeeccceeEEEEcC-------------Cc--eEEEEcCCcEEEEECCCCceE----EEEeeccCCeEEEEEEe
Q 046773 284 VMGWRMLTEFTEFVGRVRVTS-------------HE--SAVACTSSRVITFDLRNQGMV----LGERGYGRGLYVTSVDV 344 (453)
Q Consensus 284 v~~w~~l~~h~~~v~~v~~s~-------------~~--~~vas~d~tIrlWDl~t~~~~----~~~~g~~~~~~v~~~~~ 344 (453)
-..+.+|...|.+++|+| ++ +++++.|++|++||++++... ..+.+|...+...+|+|
T Consensus 140 ---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp 216 (379)
T 3jrp_A 140 ---PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 216 (379)
T ss_dssp ---EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred ---eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC
Confidence 023567889999999998 23 455567899999999887532 23456665565566777
Q ss_pred c---CCEEEEEeCCCccccCcceEEEEEcCCCee---EEEEEe--cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC
Q 046773 345 N---AEAYIVVENRELENQNRRLAIVRRVDTFEE---VCRFSL--RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 345 ~---g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~---v~~l~~--~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG 414 (453)
+ ++.+++++.|+ +++||++.+++. ...+.. +...+..+.+++++.++++++. ++|+|||+.++
T Consensus 217 ~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 217 TVLLRSYLASVSQDR-------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCSSSEEEEEEETTS-------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCCCCCeEEEEeCCC-------EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 7 77899999999 999999998742 222222 5566889999999999998877 99999999853
No 89
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=6e-29 Score=253.20 Aligned_cols=221 Identities=10% Similarity=0.032 Sum_probs=150.6
Q ss_pred CCeEEEEeCCCCEEEEEeecCCc------ceEEeeecceecCceEEEEeC--------CCceeeEEEEeeCCCeEEEeeC
Q 046773 202 DSQLIFATLDGDIHVAVIDDVAN------ETRTAHFGSVMDDGVLIDFTG--------CSRYWVGLYAGLAGRAFHIWDR 267 (453)
Q Consensus 202 g~~LasgS~D~tIkvWd~~~~g~------~~~~~~~~~v~~~~~~v~Fs~--------dg~~~~~LaSgS~D~tIrvWD~ 267 (453)
+..|++||.|++|||||+++... .++.+|.+.|. .|+|+| ||++ |||||.|+||||||+
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~----~v~~~p~~~~~~~~d~~~---las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN----DIDIADVYSADNRLAEQV---IASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE----EEEEEEEECTTCSEEEEE---EEEEETTSEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceE----EEEEccccccccCCCCCE---EEEEECCCeEEEEEC
Confidence 45799999999999999987211 23456777664 589998 7775 899999999999999
Q ss_pred CCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCCceEEEE--------------
Q 046773 268 QAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQGMVLGE-------------- 330 (453)
Q Consensus 268 ~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~~~~~~~-------------- 330 (453)
+++... ..+.+|.++|.+|+|+|++ +++++.|++|||||++++++....
T Consensus 174 ~~~~~~--------------~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 174 TDEGPI--------------LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp ETTEEE--------------EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred CCCcee--------------eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 887632 2345778899999999865 455577899999999998654332
Q ss_pred -----------eeccCCeEEEEEE-ecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCe------------
Q 046773 331 -----------RGYGRGLYVTSVD-VNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRN------------ 386 (453)
Q Consensus 331 -----------~g~~~~~~v~~~~-~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v------------ 386 (453)
.+|...+....+. +++..+++++.|+ +++|||+.+++....+..+...+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~-------~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG-------AWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI 312 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS-------EEEEEEC-------------------CCSCSEEEE
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCC-------CEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence 1222222223333 6788999999999 99999998776554443332111
Q ss_pred ------eEEEEee-CCCeEEE-EeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEec
Q 046773 387 ------VNVMGCM-NQGYALM-CVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDF 451 (453)
Q Consensus 387 ------~~~~~~~-~~~~lls-~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl 451 (453)
....+++ .++.+++ ++. ++|+|||+.+++++.++.+|... |+ +|+|||++||++.|+.|.||++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~-V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 313 SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP-IVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC-EEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 1123333 3444444 444 99999999999999999999888 88 7889999999995556666664
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-29 Score=267.67 Aligned_cols=232 Identities=9% Similarity=-0.032 Sum_probs=168.6
Q ss_pred cCCeEEEEeCCCCEEEEEeecCCc-----ceEEeeecceecCceEEEEeCC------CceeeEEEEeeCCCeEEEeeCCC
Q 046773 201 TDSQLIFATLDGDIHVAVIDDVAN-----ETRTAHFGSVMDDGVLIDFTGC------SRYWVGLYAGLAGRAFHIWDRQA 269 (453)
Q Consensus 201 ~g~~LasgS~D~tIkvWd~~~~g~-----~~~~~~~~~v~~~~~~v~Fs~d------g~~~~~LaSgS~D~tIrvWD~~t 269 (453)
+++.++|+|.|++|+|||+++... .++..|.+.|. .|+|+|+ ++ .|||||.|++|||||+.+
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~----~v~wsp~~~~~~~~~---~LAs~s~DgtvrlWd~~~ 244 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW----DLKWHEGCHAPHLVG---CLSFVSQEGTINFLEIID 244 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEE----EEEECSSCCCSSSSC---EEEEEETTSCEEEEECCC
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE----EEEECCCCCCCCCCc---eEEEEecCCeEEEEEcCC
Confidence 456789999999999999987212 12344555543 4899997 34 389999999999999987
Q ss_pred CcEEec--ccccCCcceeeeeeeeeeccceeEEEEcCCc-eEEEEcCCcEEEEECCCCceEE-EEeeccCCeEEE--EEE
Q 046773 270 EEVFVG--GDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE-SAVACTSSRVITFDLRNQGMVL-GERGYGRGLYVT--SVD 343 (453)
Q Consensus 270 g~~~~g--~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~-~~vas~d~tIrlWDl~t~~~~~-~~~g~~~~~~v~--~~~ 343 (453)
++.... ..+..+ ..++.+|..+|.+|+|+++. +++++.|++|+|||++++.++. .+.+|...+... +++
T Consensus 245 ~~~~~~~~~~~~~p-----~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s 319 (524)
T 2j04_B 245 NATDVHVFKMCEKP-----SLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYS 319 (524)
T ss_dssp CSSSSSEEECCCSC-----SEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECC
T ss_pred CccccccceeecCc-----eEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcC
Confidence 641100 000001 13577899999999998655 4566778999999999875443 346666544333 234
Q ss_pred ecC-CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC--CeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEE
Q 046773 344 VNA-EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD--RNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYS 419 (453)
Q Consensus 344 ~~g-~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~--~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~t 419 (453)
+++ ..++++|.|+ ++||||+.+++++.++..|.. .+.+++++|++..++++++ ++|||||+.+++|+++
T Consensus 320 ~~g~~~laS~S~D~-------tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~ 392 (524)
T 2j04_B 320 DFEDTVVSTVAVDG-------YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP 392 (524)
T ss_dssp TTSCCEEEEEETTS-------EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE
T ss_pred CCCCeEEEEeccCC-------eEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccccee
Confidence 455 6789999999 999999999887777766643 3778999999888887777 9999999999999999
Q ss_pred ecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 420 FRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 420 L~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
|.+|.+. |+ +|+||++.|+|| .|++|+|||+.
T Consensus 393 l~gH~~~-V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 393 LVSRETT-ITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEECSSC-EEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred eecCCCc-eEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 9999999 88 678999999999 99999999963
No 91
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=7.2e-29 Score=255.19 Aligned_cols=254 Identities=10% Similarity=0.053 Sum_probs=180.8
Q ss_pred CCCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC
Q 046773 137 SDVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD 211 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D 211 (453)
.||..+ |+||+|++ ++|+|||.|++|||||++++.+ +++..++... ..+.+++| ++..|++|+.|
T Consensus 161 ~gH~~~----V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 161 IGAGGS----ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL-RVFASSDTIN-----IWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp CSSSCC----CCEEEECSSCTTEEEEECSSSCEEEEETTSCEE-EEEECCSSCS-----CCCCCEEEETTTTEEEEECSS
T ss_pred cCCCCC----EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce-eEEeccCCCC-----ccEEEEEECCCCCEEEEEeCC
Confidence 489854 88999974 5999999999999999987765 4444333321 12344555 57799999999
Q ss_pred CCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeee
Q 046773 212 GDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 212 ~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~ 291 (453)
++|++||+++..+..+.+|...|. .|+|+|+++. .|++||.|++|+|||+++++... ......
T Consensus 231 g~i~~wd~~~~~~~~~~~h~~~v~----~v~~~p~~~~--~~~s~s~d~~v~iwd~~~~~~~~-----------~~~~~~ 293 (435)
T 4e54_B 231 GNVILLNMDGKELWNLRMHKKKVT----HVALNPCCDW--FLATASVDQTVKIWDLRQVRGKA-----------SFLYSL 293 (435)
T ss_dssp SBEEEEESSSCBCCCSBCCSSCEE----EEEECTTCSS--EEEEEETTSBCCEEETTTCCSSS-----------CCSBCC
T ss_pred CcEeeeccCcceeEEEecccceEE----eeeecCCCce--EEEEecCcceeeEEecccccccc-----------eEEEee
Confidence 999999997622566777776654 4899999885 47899999999999998866210 011245
Q ss_pred eeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCe------EEEEEEecCCEEEEEeCCCc-----c
Q 046773 292 EFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGL------YVTSVDVNAEAYIVVENREL-----E 358 (453)
Q Consensus 292 ~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~------~v~~~~~~g~~l~s~s~dg~-----~ 358 (453)
+|..+|.+|+|+|++ +++++.|++|+|||++++.++..+.+|.+.. .-..+++++..+++++.+.. .
T Consensus 294 ~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 373 (435)
T 4e54_B 294 PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCT 373 (435)
T ss_dssp BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSS
T ss_pred eccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEE
Confidence 788999999999876 4556778999999999998876654443211 11235566666666543220 0
Q ss_pred ccCcceEEEEEcCCCeeEEEEE-ecCCCeeEE-EEeeCCCeEEEEeCCeEEEEECCCCeEE
Q 046773 359 NQNRRLAIVRRVDTFEEVCRFS-LRADRNVNV-MGCMNQGYALMCVEGVIRVWEVEGGEYM 417 (453)
Q Consensus 359 ~~~~~~i~Iw~~~tg~~v~~l~-~~~~~v~~~-~~~~~~~~lls~s~~tIrlWD~~tG~~l 417 (453)
...+++|+||+..+++.+..+. .|...|.++ +|+|++.+++++++++|+|||+++|+..
T Consensus 374 ~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 374 PYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp TTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred ecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 1123489999999999888764 455567776 5889988888777799999999998764
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=1.9e-27 Score=238.10 Aligned_cols=242 Identities=10% Similarity=0.030 Sum_probs=190.7
Q ss_pred CCCCCCCeEEEEEEec------C---CEEEEEeCCCcEEEEECCCCeE-----EEEecCCCCCccccccceEEEEEEc--
Q 046773 138 DVDNPDGLTCRCLTLS------D---LYLACGFADGAVRLFDLTTRLH-----VRTFRPQHSDRLGQFSRAVSGIIIT-- 201 (453)
Q Consensus 138 gh~~~d~v~v~~lafs------~---~~LaSGS~D~TIrlWD~~tg~~-----~~tl~gh~~~~~~~~s~~V~~i~f~-- 201 (453)
+|..+ |+|++|+ + ++|++|+.|++|+|||+.++++ ++++.+|..+. ....|.+++|+
T Consensus 60 ~h~~~----v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 60 VHKSG----LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM---KKHSFWALKWGAS 132 (397)
T ss_dssp CCTTC----EEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTG---GGSCEEEEEEECC
T ss_pred cCCCc----EEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeeccccccc---CCCcEEEEEEeec
Confidence 68744 7888886 5 6899999999999999999998 89998874110 01257777766
Q ss_pred ----CCe-EEEEeCCCCEEEEEeec------CC-cc-----eEEe-------eecceecCceEEEEeCCCceeeEEEEee
Q 046773 202 ----DSQ-LIFATLDGDIHVAVIDD------VA-NE-----TRTA-------HFGSVMDDGVLIDFTGCSRYWVGLYAGL 257 (453)
Q Consensus 202 ----g~~-LasgS~D~tIkvWd~~~------~g-~~-----~~~~-------~~~~v~~~~~~v~Fs~dg~~~~~LaSgS 257 (453)
+.. |++++.|++|++||+.. .. +. .+.+ |...+ ..++|+|++ . |++|+
T Consensus 133 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~-~---l~~~~ 204 (397)
T 1sq9_A 133 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA----TSVDISERG-L---IATGF 204 (397)
T ss_dssp C----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCC----CEEEECTTS-E---EEEEC
T ss_pred cCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCc----eEEEECCCc-e---EEEEe
Confidence 678 99999999999999986 32 33 4433 33333 258999999 5 78999
Q ss_pred CCCeEEEeeCCCCcEEecccccCCcceeeeeeeee---e---ccceeEEEEcCCc--eEEEEcC---CcEEEEECCCCce
Q 046773 258 AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTE---F---TEFVGRVRVTSHE--SAVACTS---SRVITFDLRNQGM 326 (453)
Q Consensus 258 ~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~---h---~~~v~~v~~s~~~--~~vas~d---~tIrlWDl~t~~~ 326 (453)
.|++|+|||+++++.+ ..+.. | ...|.+++|+|++ +++++.| ++|++||++++++
T Consensus 205 ~dg~i~i~d~~~~~~~--------------~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 205 NNGTVQISELSTLRPL--------------YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER 270 (397)
T ss_dssp TTSEEEEEETTTTEEE--------------EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CCCcEEEEECCCCcee--------------EEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc
Confidence 9999999999998743 23445 7 8899999999876 4455667 8999999999988
Q ss_pred EEEEee-------------ccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE------ec-----
Q 046773 327 VLGERG-------------YGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS------LR----- 382 (453)
Q Consensus 327 ~~~~~g-------------~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~------~~----- 382 (453)
+..+.+ |...+...+|+++++.+++++.|+ .++||++.+++++..+. .+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 271 IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-------KLRFWDVKTKERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-------EEEEEETTTTEEEEEEECCGGGCSSGGGCC
T ss_pred cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-------eEEEEEcCCCceeEEEecccCcccchhhhh
Confidence 777666 666666666778899999999999 99999999999999998 66
Q ss_pred ----------CCCeeEEEEeeCC----------CeEEEEeC-CeEEEEECCCCe
Q 046773 383 ----------ADRNVNVMGCMNQ----------GYALMCVE-GVIRVWEVEGGE 415 (453)
Q Consensus 383 ----------~~~v~~~~~~~~~----------~~lls~s~-~tIrlWD~~tG~ 415 (453)
...+..+.+++++ .++++++. ++|+|||+++|+
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 7779999999998 67787776 999999999875
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8e-27 Score=224.84 Aligned_cols=242 Identities=11% Similarity=0.117 Sum_probs=191.0
Q ss_pred ECCCC-eEEEEecCCCCCccccccceEEEEEE-cCCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeC
Q 046773 170 DLTTR-LHVRTFRPQHSDRLGQFSRAVSGIII-TDSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTG 245 (453)
Q Consensus 170 D~~tg-~~~~tl~gh~~~~~~~~s~~V~~i~f-~g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~ 245 (453)
|..++ +++++|.+|.. .|.+++| ++..|++|+.|++|+|||+.+ + ...+..|...+. .++|+|
T Consensus 3 d~~~~~~~~~~l~~h~~--------~v~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~~~~~~v~----~~~~~~ 69 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQ--------DVRDVVAVDDSKVASVSRDGTVRLWSKDD-QWLGTVVYTGQGFLN----SVCYDS 69 (313)
T ss_dssp --CCCCEEEEEECCCSS--------CEEEEEEEETTEEEEEETTSEEEEEEESS-SEEEEEEEECSSCEE----EEEEET
T ss_pred CccccHHHHHHhhCCCC--------CcEEEEecCCCEEEEEEcCCcEEEEECCC-CEEEEEeecCCccEE----EEEECC
Confidence 34444 78899998765 5777776 578999999999999999977 4 344555655443 589999
Q ss_pred CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCCc
Q 046773 246 CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQG 325 (453)
Q Consensus 246 dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~ 325 (453)
++++ |++|+.|++|++||+...... .....+.+|...|.++.++++.+++++.|++|++|| +++
T Consensus 70 ~~~~---l~~~~~dg~i~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~ 133 (313)
T 3odt_A 70 EKEL---LLFGGKDTMINGVPLFATSGE-----------DPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGS 133 (313)
T ss_dssp TTTE---EEEEETTSCEEEEETTCCTTS-----------CC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTE
T ss_pred CCCE---EEEecCCCeEEEEEeeecCCC-----------CcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCc
Confidence 9996 889999999999999875410 001346788899999999887778888899999999 445
Q ss_pred eEEEEeeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEEeeCCCeEEEEeC
Q 046773 326 MVLGERGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMGCMNQGYALMCVE 403 (453)
Q Consensus 326 ~~~~~~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~~~~~~~lls~s~ 403 (453)
.+.....|...+...++.+ +++.+++++.|+ .+++|| ..+.+..+.. +...+..+.+++++. +++++.
T Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~ 203 (313)
T 3odt_A 134 LVYNLQAHNASVWDAKVVSFSENKFLTASADK-------TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSN 203 (313)
T ss_dssp EEEEEECCSSCEEEEEEEETTTTEEEEEETTS-------CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEET
T ss_pred EEEecccCCCceeEEEEccCCCCEEEEEECCC-------CEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccC
Confidence 5555566666665556666 889999999999 999999 5666777776 667788999998877 666666
Q ss_pred -CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 404 -GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 404 -~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++|++||+.+++++.++.+|.+. |. +|+|+++ |+++ .|++|+|||+.
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~-l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHESF-VYCIKLLPNGD-IVSCGEDRTVRIWSKE 254 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSC-EEEEEECTTSC-EEEEETTSEEEEECTT
T ss_pred CCeEEEEECCchhhhhhhhcCCce-EEEEEEecCCC-EEEEecCCEEEEEECC
Confidence 99999999999999999999998 87 6778985 6677 99999999974
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=3.1e-27 Score=259.15 Aligned_cols=274 Identities=13% Similarity=0.089 Sum_probs=213.6
Q ss_pred CCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
+|..+ |.|++|++ ++||+|+.|++|+|||+.+++++.++.+|.. .|.+++|+ +..|++++.|++
T Consensus 53 ~~~~~----v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--------~v~~~~~s~~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 53 VTETP----VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD--------YIRSIAVHPTKPYVLSGSDDLT 120 (814)
T ss_dssp CCSSC----EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEEEEEECSSSSEEEEEETTSE
T ss_pred cCCCc----EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC--------CEEEEEEeCCCCEEEEEcCCCE
Confidence 68754 88999986 6999999999999999999999999998754 57888875 668999999999
Q ss_pred EEEEEeecCC--cceEEeeecceecCceEEEEeC-CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeee
Q 046773 214 IHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTG-CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRML 290 (453)
Q Consensus 214 IkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~-dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l 290 (453)
|++||+++.. ...+..|...+. .++|+| +++. |++++.|++|++||+.+++.. ..+
T Consensus 121 i~vw~~~~~~~~~~~~~~~~~~v~----~~~~~p~~~~~---l~~~~~dg~v~vwd~~~~~~~--------------~~~ 179 (814)
T 3mkq_A 121 VKLWNWENNWALEQTFEGHEHFVM----CVAFNPKDPST---FASGCLDRTVKVWSLGQSTPN--------------FTL 179 (814)
T ss_dssp EEEEEGGGTSEEEEEEECCSSCEE----EEEEETTEEEE---EEEEETTSEEEEEETTCSSCS--------------EEE
T ss_pred EEEEECCCCceEEEEEcCCCCcEE----EEEEEcCCCCE---EEEEeCCCeEEEEECCCCcce--------------eEE
Confidence 9999998732 344555655543 489999 7765 889999999999999887621 112
Q ss_pred e-eeccceeEEEEcC--Cc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceE
Q 046773 291 T-EFTEFVGRVRVTS--HE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 291 ~-~h~~~v~~v~~s~--~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i 365 (453)
. .+...+.++.++| ++ +++++.|++|++||+++++++....+|...+...++++++..+++++.|+ ++
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~v 252 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-------TL 252 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-------CE
T ss_pred ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-------eE
Confidence 2 3347788999987 55 34445678999999999887777777777776677888889999999999 99
Q ss_pred EEEEcCCCeeEEEEEecCCCeeEEEEeeCCCe--EEEEeCCeEEEEECCCCeEEEEe-----------------------
Q 046773 366 IVRRVDTFEEVCRFSLRADRNVNVMGCMNQGY--ALMCVEGVIRVWEVEGGEYMYSF----------------------- 420 (453)
Q Consensus 366 ~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~--lls~s~~tIrlWD~~tG~~l~tL----------------------- 420 (453)
+||+..+++.+..+..+...+..+.++|++.. ++++.++.+.+|++..+.....+
T Consensus 253 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (814)
T 3mkq_A 253 KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAV 332 (814)
T ss_dssp EEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEE
T ss_pred EEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeee
Confidence 99999999999999888888999999998874 44445588999998653222111
Q ss_pred --------------------cccCCceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 421 --------------------RERIGEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 421 --------------------~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
..+... +. +|+||+++|+++.|+.+.||++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~spdg~~la~~~~~~~~i~~~~ 385 (814)
T 3mkq_A 333 IRGNEEVEQDEPLSLQTKELGSVDVF-PQSLAHSPNGRFVTVVGDGEYVIYTAL 385 (814)
T ss_dssp CCSCCCCCSSSCBCCCCEEECCCSSC-CSEEEECTTSSEEEEEETTEEEEEETT
T ss_pred cccccccccCccceeeeecCCCCccC-CceeEECCCCCEEEEecCCEEEEEECc
Confidence 112222 33 67899999988888999999864
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.7e-28 Score=237.48 Aligned_cols=244 Identities=13% Similarity=0.149 Sum_probs=186.6
Q ss_pred CeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC-C--cceEEeeecceecCceEEEEeCC--
Q 046773 174 RLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV-A--NETRTAHFGSVMDDGVLIDFTGC-- 246 (453)
Q Consensus 174 g~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~-g--~~~~~~~~~~v~~~~~~v~Fs~d-- 246 (453)
|+++.+|.+|.. .|.+++|+ ++.|++|+.|++|+|||++.. + ...+..|.+.|. .++|+|+
T Consensus 1 G~~~~~~~~h~~--------~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~ 68 (379)
T 3jrp_A 1 GSMVVIANAHNE--------LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW----RVDWAHPKF 68 (379)
T ss_dssp ----CCEEECCC--------CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE----EEEECCGGG
T ss_pred CCccEEecCCcc--------cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE----EEEeCCCCC
Confidence 567788888764 68888876 678999999999999999841 2 344556666553 4899877
Q ss_pred CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC--c--eEEEEcCCcEEEEECC
Q 046773 247 SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH--E--SAVACTSSRVITFDLR 322 (453)
Q Consensus 247 g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~--~--~~vas~d~tIrlWDl~ 322 (453)
+++ |++|+.|++|+|||+++++... ...+.+|...|.+++|+|+ + +++++.|++|++||++
T Consensus 69 ~~~---l~s~~~dg~v~iwd~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~ 133 (379)
T 3jrp_A 69 GTI---LASCSYDGKVLIWKEENGRWSQ------------IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 133 (379)
T ss_dssp CSE---EEEEETTSCEEEEEEETTEEEE------------EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred CCE---EEEeccCCEEEEEEcCCCceeE------------eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecC
Confidence 775 8899999999999999986211 1345678899999999987 4 5666778999999999
Q ss_pred CCceE--EEEeeccCCeEEEEEEe-------------cCCEEEEEeCCCccccCcceEEEEEcCCCe----eEEEEEecC
Q 046773 323 NQGMV--LGERGYGRGLYVTSVDV-------------NAEAYIVVENRELENQNRRLAIVRRVDTFE----EVCRFSLRA 383 (453)
Q Consensus 323 t~~~~--~~~~g~~~~~~v~~~~~-------------~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~----~v~~l~~~~ 383 (453)
++... ....+|...+...++++ +++.+++++.|+ .|+|||+.+++ .+..+..|.
T Consensus 134 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 134 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-------LVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp TTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS-------CEEEEEEETTTTEEEEEEEECCCS
T ss_pred CCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-------eEEEEEecCCCcceeeEEEEeccc
Confidence 87433 23355655555556666 578899999999 99999998764 445667778
Q ss_pred CCeeEEEEeeC---CCeEEEEeC-CeEEEEECCCCe-----EEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEec
Q 046773 384 DRNVNVMGCMN---QGYALMCVE-GVIRVWEVEGGE-----YMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 384 ~~v~~~~~~~~---~~~lls~s~-~tIrlWD~~tG~-----~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
..+..+.++|+ +.++++++. ++|+|||+.+++ .+.....|... |+ +|+||+++|+++ .|+.|+|||+
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC-EEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCc-EEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 88999999999 777777776 999999999874 23333447777 77 678999999998 9999999997
Q ss_pred C
Q 046773 452 G 452 (453)
Q Consensus 452 ~ 452 (453)
.
T Consensus 286 ~ 286 (379)
T 3jrp_A 286 N 286 (379)
T ss_dssp E
T ss_pred C
Confidence 4
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=7.9e-28 Score=236.24 Aligned_cols=242 Identities=13% Similarity=0.115 Sum_probs=182.4
Q ss_pred CCCCCCCeEEEEEEecC-----CEEEEEeCCCcEEEEECCCCe-EEEEecCCCCCccccccceEEEEE--------EcCC
Q 046773 138 DVDNPDGLTCRCLTLSD-----LYLACGFADGAVRLFDLTTRL-HVRTFRPQHSDRLGQFSRAVSGII--------ITDS 203 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~-----~~LaSGS~D~TIrlWD~~tg~-~~~tl~gh~~~~~~~~s~~V~~i~--------f~g~ 203 (453)
+|..+ |.|++|++ ++|++|+.|++|+|||+.+++ +++++.+|.. .|.+++ .+++
T Consensus 63 ~~~~~----v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~s~~~~ 130 (357)
T 3i2n_A 63 EKAKP----IKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKE--------IINAIDGIGGLGIGEGAP 130 (357)
T ss_dssp EESSC----EEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSS--------CEEEEEEESGGGCC-CCC
T ss_pred cccCc----EEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEeccc--------ceEEEeeccccccCCCcc
Confidence 57644 89999975 689999999999999999998 8999998764 466664 3467
Q ss_pred eEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEE----EeCCCceeeEEEEeeCCCeEEEeeCCCCcEEeccc
Q 046773 204 QLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLID----FTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGD 277 (453)
Q Consensus 204 ~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~----Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~ 277 (453)
.|++|+.|++|++||+.+.. ...+..|.+........++ |+|++++ |++|+.|++|+|||+++++...
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~--- 204 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV---VCAGYDNGDIKLFDLRNMALRW--- 204 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE---EEEEETTSEEEEEETTTTEEEE---
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE---EEEEccCCeEEEEECccCceee---
Confidence 99999999999999998722 3344444432111112355 7899986 8899999999999999988421
Q ss_pred ccCCcceeeeeeeeeeccceeEEEEcC---Cc--eEEEEcCCcEEEEECCCCceEEEE-----eeccCCeEEEEEEecCC
Q 046773 278 LTDHNTVMGWRMLTEFTEFVGRVRVTS---HE--SAVACTSSRVITFDLRNQGMVLGE-----RGYGRGLYVTSVDVNAE 347 (453)
Q Consensus 278 l~~~~~v~~w~~l~~h~~~v~~v~~s~---~~--~~vas~d~tIrlWDl~t~~~~~~~-----~g~~~~~~v~~~~~~g~ 347 (453)
...|...|.+++|+| ++ +++++.|++|++||+++++++... .+|...+...++++++.
T Consensus 205 ------------~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 205 ------------ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp ------------EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred ------------ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 346778899999997 44 455667899999999886543222 25665555555666666
Q ss_pred -EEEEEeCCCccccCcceEEEEEcCCC-------------------eeEEEEEecCCCeeEEEEeeCCCeEE-EEeC-Ce
Q 046773 348 -AYIVVENRELENQNRRLAIVRRVDTF-------------------EEVCRFSLRADRNVNVMGCMNQGYAL-MCVE-GV 405 (453)
Q Consensus 348 -~l~s~s~dg~~~~~~~~i~Iw~~~tg-------------------~~v~~l~~~~~~v~~~~~~~~~~~ll-s~s~-~t 405 (453)
.+++++.|+ .++||++.++ +++..+..|...+..+.+++++.+++ +++. ++
T Consensus 273 ~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~ 345 (357)
T 3i2n_A 273 ELFLTAGGAG-------GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQT 345 (357)
T ss_dssp EEEEEEETTS-------EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred cEEEEEeCCC-------cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCc
Confidence 689999999 9999998754 45777888888899999999999988 6775 99
Q ss_pred EEEEECCCCeE
Q 046773 406 IRVWEVEGGEY 416 (453)
Q Consensus 406 IrlWD~~tG~~ 416 (453)
|+|||+.+.+.
T Consensus 346 i~iw~~~~~~~ 356 (357)
T 3i2n_A 346 VRVLIVTKLNK 356 (357)
T ss_dssp EEEEEECC---
T ss_pred EEEEECCCccc
Confidence 99999987654
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.2e-27 Score=242.77 Aligned_cols=276 Identities=9% Similarity=-0.004 Sum_probs=206.2
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCe---EEEEecCCCCC-----------------------------------
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRL---HVRTFRPQHSD----------------------------------- 186 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~---~~~tl~gh~~~----------------------------------- 186 (453)
+.|++|++ ++|+++ .+++|++||+.+|+ .+.++..+...
T Consensus 7 ~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 7 LQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred EEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 67888875 666665 57899999999999 88787644210
Q ss_pred -----------ccccccceEEEEEEc--CCeE-EEEeCCCCEEEEEee--cCC--cceEEee--ecceecCceEEEEeCC
Q 046773 187 -----------RLGQFSRAVSGIIIT--DSQL-IFATLDGDIHVAVID--DVA--NETRTAH--FGSVMDDGVLIDFTGC 246 (453)
Q Consensus 187 -----------~~~~~s~~V~~i~f~--g~~L-asgS~D~tIkvWd~~--~~g--~~~~~~~--~~~v~~~~~~v~Fs~d 246 (453)
...++...|.+++|+ ++.| ++|+.|++|+|||+. + + +..+..| ...+ ..++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~v----~~~~~sp~ 160 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS-KNVLKLRKRFCFSKRP----NAISIAED 160 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS-SSCEEEEEEEECSSCE----EEEEECTT
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC-CceeeeeecccCCCCc----eEEEEcCC
Confidence 000122258888886 5665 899999999999998 5 4 3444433 2332 25899999
Q ss_pred CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC---c--eEEEEcCCcEEEEEC
Q 046773 247 SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH---E--SAVACTSSRVITFDL 321 (453)
Q Consensus 247 g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~---~--~~vas~d~tIrlWDl 321 (453)
|++ |++|+.|++|++||+.+++... ....++.+|...|.+++|+|+ + +++++.|++|++||+
T Consensus 161 ~~~---l~~~~~~g~v~~~~~~~~~~~~----------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 161 DTT---VIIADKFGDVYSIDINSIPEEK----------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp SSE---EEEEETTSEEEEEETTSCCCSS----------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEE
T ss_pred CCE---EEEEeCCCcEEEEecCCccccc----------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC
Confidence 986 8899999999999998876310 001356789999999999998 5 455567899999999
Q ss_pred CCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEec------------------
Q 046773 322 RNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLR------------------ 382 (453)
Q Consensus 322 ~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~------------------ 382 (453)
+++.++... .+|...+...+|+ +++.+++++.|+ +|+|||+.+++++..+..+
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~-------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD-------KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS-------EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC-------eEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence 998887663 5676666556667 899999999999 9999999999998888643
Q ss_pred -------CCCeeEEEEeeCCCeEEEEe-C-CeEEEEEC--CCC---eEEEEecccCCceEE--EEecCCCEEEEE-e---
Q 046773 383 -------ADRNVNVMGCMNQGYALMCV-E-GVIRVWEV--EGG---EYMYSFRERIGEEVI--AFVGDDRHVAAS-C--- 442 (453)
Q Consensus 383 -------~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~--~tG---~~l~tL~gh~~~~V~--a~s~d~~~lasg-~--- 442 (453)
...+..+.+++++.++++++ . ++|+|||+ .++ +++.++.+| +. |+ +|+|++.+++.+ .
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~-v~~~~~~~~~~~v~~~~~~~~ 377 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YN-VISLSAHNDEFQVTLDNKESS 377 (450)
T ss_dssp -----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SC-EEEEEEETTEEEEEECCTTCC
T ss_pred ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-Cc-eEEEEecCCcEEEEEecccCC
Confidence 23477888999999999887 4 99999999 777 888899888 66 76 566754334433 3
Q ss_pred ---CCcEEEEec
Q 046773 443 ---GTNIHLWDF 451 (453)
Q Consensus 443 ---D~~IklWDl 451 (453)
+..|+||.+
T Consensus 378 ~~~~~~i~v~~~ 389 (450)
T 2vdu_B 378 GVQKNFAKFIEY 389 (450)
T ss_dssp SSCCCSEEEEEE
T ss_pred CCCCcceEEEEE
Confidence 456899975
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.5e-28 Score=246.62 Aligned_cols=259 Identities=13% Similarity=0.137 Sum_probs=188.5
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCCccccccceEEEEEEc---CCeEEEEeCCCCEEEEEeec---CC-c-c
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTF-RPQHSDRLGQFSRAVSGIIIT---DSQLIFATLDGDIHVAVIDD---VA-N-E 225 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl-~gh~~~~~~~~s~~V~~i~f~---g~~LasgS~D~tIkvWd~~~---~g-~-~ 225 (453)
..+++++ +|+ .+|+++.+| .+|.. .|.+++|+ +..|++||.|++|+|||+.+ .. . .
T Consensus 40 ~~~~~~~------~w~-~~g~~~~~~~~~h~~--------~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 104 (437)
T 3gre_A 40 EIVRSPN------MGN-LRGKLIATLMENEPN--------SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSS 104 (437)
T ss_dssp CCCCCCC------GGG-CCCCEEEEECTTTTS--------CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSC
T ss_pred ccccccc------ccc-ccceEEeeeccCCCC--------ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccce
Confidence 4555554 488 578899999 66543 68888875 46899999999999999865 11 1 1
Q ss_pred eEE-eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCC---CCcEE---ecccccCCcceeeeeeee--e--ec
Q 046773 226 TRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQ---AEEVF---VGGDLTDHNTVMGWRMLT--E--FT 294 (453)
Q Consensus 226 ~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~---tg~~~---~g~~l~~~~~v~~w~~l~--~--h~ 294 (453)
.+. .|.+.|. .|+|+|+++. |++|+.|++|+|||++ +++.. .++. + +.+. . +.
T Consensus 105 ~~~~~h~~~v~----~~~~~~~~~~---l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~------i---~~~~~~~~~~~ 168 (437)
T 3gre_A 105 SLTYDCSSTVT----QITMIPNFDA---FAVSSKDGQIIVLKVNHYQQESEVKFLNCEC------I---RKINLKNFGKN 168 (437)
T ss_dssp SEEEECSSCEE----EEEECTTSSE---EEEEETTSEEEEEEEEEEEETTEEEEEEEEE------E---EEEEGGGGSSC
T ss_pred eeeccCCCCEE----EEEEeCCCCE---EEEEeCCCEEEEEEeccccCCceeeccccce------e---EEEEccCcccc
Confidence 222 3555543 4899999986 8899999999999995 55522 1110 0 1111 1 33
Q ss_pred cceeEEE--EcCCc--eEEEEcCCcEEEEECCCCceEEEEee--ccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEE
Q 046773 295 EFVGRVR--VTSHE--SAVACTSSRVITFDLRNQGMVLGERG--YGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVR 368 (453)
Q Consensus 295 ~~v~~v~--~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g--~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw 368 (453)
..+.++. +++++ +++++.|++|++||+++++++..+.+ |...+...+|+++++.+++++.|+ +|+||
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-------~i~iw 241 (437)
T 3gre_A 169 EYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-------IIDIW 241 (437)
T ss_dssp CCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-------CEEEE
T ss_pred cCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-------eEEEE
Confidence 4566666 34444 45567789999999999988877766 555555556677888999999999 99999
Q ss_pred EcCCCeeEEEEE-ecCCCeeEEEEee----CCCeEEEEeC-CeEEEEECCCCeEEEEecccCCc----------------
Q 046773 369 RVDTFEEVCRFS-LRADRNVNVMGCM----NQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGE---------------- 426 (453)
Q Consensus 369 ~~~tg~~v~~l~-~~~~~v~~~~~~~----~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~---------------- 426 (453)
|+.+++++.++. .+...+..+.+++ ++.++++++. ++|+|||+.+++++.++.+|...
T Consensus 242 d~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 242 DIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp ETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred EcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccc
Confidence 999999998886 3444577886654 4556666666 99999999999999999877432
Q ss_pred ---------eEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 427 ---------EVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 427 ---------~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.|+ +|+ ++++|+++ .|++|+|||+.
T Consensus 322 ~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 322 NFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp CCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred eecccccCCceEEEEEC-CceEEEecCCCCeEEEEECC
Confidence 133 455 66889999 99999999975
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=2.4e-27 Score=238.04 Aligned_cols=266 Identities=9% Similarity=0.048 Sum_probs=190.7
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeE-EEEeCCCC
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQL-IFATLDGD 213 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~L-asgS~D~t 213 (453)
.+|.++ |+|++|++ ++||+|+.| .++|||+++++++.....+ . ..+..+.++++.+ ++++.|++
T Consensus 16 ~~h~~~----V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~d~~ 82 (355)
T 3vu4_A 16 NHVSNP----VTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR-H-------LSKVRMLHRTNYVAFVTGVKEV 82 (355)
T ss_dssp ---CCC----CCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS-C-------CCEEEECTTSSEEEEECSSTTE
T ss_pred ccCCCc----eEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC-C-------eEEEEEcCCCCEEEEEECCccE
Confidence 368744 78999986 689999866 5899999999887665421 1 1233345667766 56788999
Q ss_pred EEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCC-cEEecccccCCcceeeeeee
Q 046773 214 IHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAE-EVFVGGDLTDHNTVMGWRML 290 (453)
Q Consensus 214 IkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg-~~~~g~~l~~~~~v~~w~~l 290 (453)
|+|||+.+ + +..+. +...+ ..+.|+++. ++. +.|++|+|||+.++ +.+ +++
T Consensus 83 v~iWd~~~-~~~~~~~~-~~~~v----~~v~~~~~~-----~~~-~~~~~i~i~d~~~~~~~~--------------~~~ 136 (355)
T 3vu4_A 83 VHIWDDVK-KQDVSRIK-VDAPV----KDLFLSREF-----IVV-SYGDVISVFKFGNPWKRI--------------TDD 136 (355)
T ss_dssp EEEEETTT-TEEEEEEE-CSSCE----EEEEECSSE-----EEE-EETTEEEEEESSTTCCBS--------------SCC
T ss_pred EEEEECCC-CcEEEEEE-CCCce----EEEEEcCCE-----EEE-EEcCEEEEEECCCCceee--------------EEe
Confidence 99999987 5 22222 22222 247888873 233 34889999999987 432 112
Q ss_pred eeeccceeEEEEcCCceEEE--EcCCcEEEEECCCCc----------------eEEEEeeccCCeEEEEEEecCCEEEEE
Q 046773 291 TEFTEFVGRVRVTSHESAVA--CTSSRVITFDLRNQG----------------MVLGERGYGRGLYVTSVDVNAEAYIVV 352 (453)
Q Consensus 291 ~~h~~~v~~v~~s~~~~~va--s~d~tIrlWDl~t~~----------------~~~~~~g~~~~~~v~~~~~~g~~l~s~ 352 (453)
.. +...+.+++..++++ +.+++|++||+++++ ++..+.+|...+...+|+|+++.++++
T Consensus 137 ~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 137 IR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp EE---EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred cc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE
Confidence 22 344556777555554 346899999999865 244557787777777788889999999
Q ss_pred eCCCccccCcce-EEEEEcCCCeeEEEEE-e-cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeE--EEEecc----
Q 046773 353 ENRELENQNRRL-AIVRRVDTFEEVCRFS-L-RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEY--MYSFRE---- 422 (453)
Q Consensus 353 s~dg~~~~~~~~-i~Iw~~~tg~~v~~l~-~-~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~--l~tL~g---- 422 (453)
+.|+ + |+|||+.+++++.++. . |...+..+.++|++.++++++. ++|+|||++++.. ...|.+
T Consensus 214 s~d~-------~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~ 286 (355)
T 3vu4_A 214 SQDG-------TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINM 286 (355)
T ss_dssp ETTC-------SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEEC
T ss_pred eCCC-------CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeec
Confidence 9999 9 9999999999999998 4 8888999999999999999887 9999999987531 111111
Q ss_pred ----------------cC---CceEEEEecCCCEEEEE-eCCcEEEEecC
Q 046773 423 ----------------RI---GEEVIAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 423 ----------------h~---~~~V~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.. .. +.++++|++.|+++ .|+++++|++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 287 KYFQSEWSLCNFKLSVDKHVRGC-KIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp CCCCCSSCSEEEECCCCTTCCCC-EEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred cccccccceeEEEeccCCCCCce-EEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 11 13 55889999999999 99999999863
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=5.1e-27 Score=234.31 Aligned_cols=285 Identities=12% Similarity=0.046 Sum_probs=184.0
Q ss_pred CCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc-----CCeEEEEe
Q 046773 138 DVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT-----DSQLIFAT 209 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~-----g~~LasgS 209 (453)
+|..+ |++++|++ .+|++++.|++|+|||+.+++++..+.. .. .+.++++. +..+++++
T Consensus 97 ~~~~~----v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 97 VHRYS----VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF-EE--------TVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp CCSSC----EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC-SS--------CEEEEEECSSCSSCCEEEEEE
T ss_pred cCCCc----EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC-CC--------ceeeeEeecCCCCCcEEEEEc
Confidence 57744 89999976 4899999999999999999999988863 32 35556653 34899999
Q ss_pred CCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc-E---EecccccCCcce
Q 046773 210 LDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE-V---FVGGDLTDHNTV 284 (453)
Q Consensus 210 ~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~-~---~~g~~l~~~~~v 284 (453)
.|+.|++||+.+.. ...+..|.+.+. .++|+|++++ .|++|+.|++|+|||++++. . +..+. .....
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~----~~~~~~~~~~--ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~ 235 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGHRQEIL----AVSWSPRYDY--ILATASADSRVKLWDVRRASGCLITLDQHN--GKKSQ 235 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCCCSCEE----EEEECSSCTT--EEEEEETTSCEEEEETTCSSCCSEECCTTT--TCSCC
T ss_pred CCCeEEEEeCCCcceeeeecCCCCcEE----EEEECCCCCc--EEEEEcCCCcEEEEECCCCCcccccccccc--cccce
Confidence 99999999998722 455666666553 4899999985 37899999999999999876 1 11100 00000
Q ss_pred eeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeecc-----CCeEEEEEEecCCEEEEEeCCCc
Q 046773 285 MGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGYG-----RGLYVTSVDVNAEAYIVVENREL 357 (453)
Q Consensus 285 ~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~-----~~~~v~~~~~~g~~l~s~s~dg~ 357 (453)
.....+.+|...|.+++|+|++ +++++.|++|++||+++++......++. ...........+..++.++.++
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS- 314 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT-
T ss_pred eeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC-
Confidence 0011235788999999999876 4555678999999999986543321111 1111111122345667778888
Q ss_pred cccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEEEEec-CC
Q 046773 358 ENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVIAFVG-DD 435 (453)
Q Consensus 358 ~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~-d~ 435 (453)
.++||+..+++++..+..|...+..+.+++++.++++++. ++|+|||+.+++.+.....+... ..+.+ +.
T Consensus 315 ------~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~ 386 (408)
T 4a11_B 315 ------TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK--SQLNPAFE 386 (408)
T ss_dssp ------EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------
T ss_pred ------EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec--cccccccc
Confidence 9999999999999999989888999999999999998887 99999999999987765443322 23333 33
Q ss_pred CEEEEE-eCCcEEEEecC
Q 046773 436 RHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 436 ~~lasg-~D~~IklWDl~ 452 (453)
....+. .|+.|+||+..
T Consensus 387 ~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 387 DAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp ------------------
T ss_pred eeecccCccCceeecCCc
Confidence 334455 89999999863
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.4e-26 Score=228.41 Aligned_cols=257 Identities=10% Similarity=0.018 Sum_probs=194.9
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeE-EEEeCCCCEEEEEeecCC--cceEEe
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQL-IFATLDGDIHVAVIDDVA--NETRTA 229 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~L-asgS~D~tIkvWd~~~~g--~~~~~~ 229 (453)
.++++++.|++|++||+.++++++++.+|. .+.+++|+ ++.| ++++.|++|++||+.+ + ...+..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---------~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~-~~~~~~~~~ 72 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---------NPMGAVISPDGTKVYVANAHSNDVSIIDTAT-NNVIATVPA 72 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---------SEEEEEECTTSSEEEEEEGGGTEEEEEETTT-TEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---------CcceEEECCCCCEEEEECCCCCeEEEEECCC-CeEEEEEEC
Confidence 468999999999999999999999998653 35677775 5555 7788999999999987 5 222222
Q ss_pred eecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce--
Q 046773 230 HFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-- 307 (453)
Q Consensus 230 ~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-- 307 (453)
+. .+ ..++|+|||+++ +++++.|++|++||+++++... .+..+ ..+.+++|+|++.
T Consensus 73 ~~-~v----~~~~~spdg~~l--~~~~~~~~~v~v~d~~~~~~~~--------------~~~~~-~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 73 GS-SP----QGVAVSPDGKQV--YVTNMASSTLSVIDTTSNTVAG--------------TVKTG-KSPLGLALSPDGKKL 130 (391)
T ss_dssp SS-SE----EEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEE--------------EEECS-SSEEEEEECTTSSEE
T ss_pred CC-Cc----cceEECCCCCEE--EEEECCCCEEEEEECCCCeEEE--------------EEeCC-CCcceEEECCCCCEE
Confidence 21 22 248999999962 4577788999999999988431 12222 4578899998763
Q ss_pred EEEE-cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEE-EEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCC
Q 046773 308 AVAC-TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAY-IVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADR 385 (453)
Q Consensus 308 ~vas-~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l-~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~ 385 (453)
++++ .+++|++||+++++++.....+ ......+++++++.+ ++++.++ .+++||..+++++..+.. ...
T Consensus 131 ~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~-------~v~~~d~~~~~~~~~~~~-~~~ 201 (391)
T 1l0q_A 131 YVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSM-------SISVIDTVTNSVIDTVKV-EAA 201 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTT-------EEEEEETTTTEEEEEEEC-SSE
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCC-------EEEEEECCCCeEEEEEec-CCC
Confidence 2444 4689999999998776655433 234456677888877 5566677 999999999988877754 445
Q ss_pred eeEEEEeeCCCeEEEEe---C-CeEEEEECCCCeEEEEecccCCceEEEEecCCCEE-EEE-eCCcEEEEecC
Q 046773 386 NVNVMGCMNQGYALMCV---E-GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHV-AAS-CGTNIHLWDFG 452 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s---~-~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~l-asg-~D~~IklWDl~ 452 (453)
+..+.++++++++++++ . ++|++||+++++++..+..|....-.+|+||+++| +++ .|++|++||+.
T Consensus 202 ~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 78889999999888765 4 99999999999999999887654112788999987 677 89999999974
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.6e-28 Score=238.92 Aligned_cols=231 Identities=8% Similarity=0.048 Sum_probs=178.9
Q ss_pred ecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEeee
Q 046773 152 LSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTAHF 231 (453)
Q Consensus 152 fs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~~~ 231 (453)
.++.+||||+.|++|+|||+++++++.++.. . .|.++.+.+. ++++|.|++|++|+.+.
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~--~--------~v~~~~~~~~-~~s~s~D~~i~~w~~~~---------- 104 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITT--P--------NPRTGGEHPA-IISRGPCNRLLLLYPGN---------- 104 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEE--E--------CCCTTCCCCS-EEEECSTTEEEEEETTT----------
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEec--C--------CceeeeeCCc-eEEecCCCeEEEEEccC----------
Confidence 3567899999999999999999999988862 1 3444556666 88889999988887543
Q ss_pred cceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC--Cc--e
Q 046773 232 GSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HE--S 307 (453)
Q Consensus 232 ~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~--~ 307 (453)
.+.+||+.+++++.. ...+|.++|.+++++| ++ +
T Consensus 105 -----------------------------~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~~l 142 (343)
T 3lrv_A 105 -----------------------------QITILDSKTNKVLRE-------------IEVDSANEIIYMYGHNEVNTEYF 142 (343)
T ss_dssp -----------------------------EEEEEETTTCCEEEE-------------EECCCSSCEEEEECCC---CCEE
T ss_pred -----------------------------ceEEeecCCcceeEE-------------eecCCCCCEEEEEcCCCCCCCEE
Confidence 356788888874431 1125668899999998 65 3
Q ss_pred EEEEcCCcEEEEECCCCceEEEEe-eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeE-EEEEe-cCC
Q 046773 308 AVACTSSRVITFDLRNQGMVLGER-GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEV-CRFSL-RAD 384 (453)
Q Consensus 308 ~vas~d~tIrlWDl~t~~~~~~~~-g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v-~~l~~-~~~ 384 (453)
++++.|++|++||+++++++.... .+...+...+|+|++..+++++.|+ +|+|||+.+++++ ..+.. |..
T Consensus 143 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-------~i~iwd~~~~~~~~~~~~~~h~~ 215 (343)
T 3lrv_A 143 IWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-------ILDVYNLSSPDQASSRFPVDEEA 215 (343)
T ss_dssp EEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-------CEEEEESSCTTSCCEECCCCTTS
T ss_pred EEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCCCCccEEeccCCC
Confidence 445678999999999988755442 2333455567788889999999999 9999999999887 77887 888
Q ss_pred CeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecc---cCCc---eEEEEecCCCEEEEE-e-CCcEEEEecC
Q 046773 385 RNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRE---RIGE---EVIAFVGDDRHVAAS-C-GTNIHLWDFG 452 (453)
Q Consensus 385 ~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~g---h~~~---~V~a~s~d~~~lasg-~-D~~IklWDl~ 452 (453)
.|..+.|+|++.+++++++++|+|||+.++++++++.. |... ...+|+|++++|+++ . |+.|+||++.
T Consensus 216 ~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp CEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 89999999999999888888999999999988776654 3222 124788999999997 5 9999999873
No 103
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=6e-27 Score=234.78 Aligned_cols=247 Identities=11% Similarity=0.045 Sum_probs=188.0
Q ss_pred EEECCCCeEEEEecCCCCCccccccceEEEEEEc--C-CeEEEEeCCCCEEEEEeecCC-cceEE--eeecceecCceEE
Q 046773 168 LFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--D-SQLIFATLDGDIHVAVIDDVA-NETRT--AHFGSVMDDGVLI 241 (453)
Q Consensus 168 lWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g-~~LasgS~D~tIkvWd~~~~g-~~~~~--~~~~~v~~~~~~v 241 (453)
+|++.+.+..+++.+|.. .|.+++|+ + +.|++|+.|++|+|||+.+.. ...+. +|.+.|. .+
T Consensus 57 ~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~----~~ 124 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDR--------RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT----GM 124 (383)
T ss_dssp HHHHTTCEEEEEECCCSS--------CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE----EE
T ss_pred cccccccceEEeccCCCC--------CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee----EE
Confidence 456667778888988764 68889886 4 689999999999999998722 22222 3555543 48
Q ss_pred EEeC-CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEE
Q 046773 242 DFTG-CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVIT 318 (453)
Q Consensus 242 ~Fs~-dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrl 318 (453)
+|+| ++++ |++++.|++|+|||++++.... .....+|...|.+++|+|++ +++++.|++|++
T Consensus 125 ~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 189 (383)
T 3ei3_B 125 KFNQFNTNQ---LFVSSIRGATTLRDFSGSVIQV------------FAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLL 189 (383)
T ss_dssp EEETTEEEE---EEEEETTTEEEEEETTSCEEEE------------EECCCCSSCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred EeCCCCCCE---EEEEeCCCEEEEEECCCCceEE------------EeccCCCCCCeEEEEECCCCCEEEEECCCCCEEE
Confidence 9999 5664 8899999999999998755211 01123455789999999876 455567899999
Q ss_pred EECCCCceEEEEeeccCCeEEEEEEecCC-EEEEEeCCCccccCcceEEEEEcCC----CeeEEEEEecCCCeeEEEEee
Q 046773 319 FDLRNQGMVLGERGYGRGLYVTSVDVNAE-AYIVVENRELENQNRRLAIVRRVDT----FEEVCRFSLRADRNVNVMGCM 393 (453)
Q Consensus 319 WDl~t~~~~~~~~g~~~~~~v~~~~~~g~-~l~s~s~dg~~~~~~~~i~Iw~~~t----g~~v~~l~~~~~~v~~~~~~~ 393 (453)
||++ ++++..+.+|...+...++++++. .+++++.|+ +|+|||+.+ ++++..+ .|...+..+.+++
T Consensus 190 ~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-------~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 190 LGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDA-------TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNP 260 (383)
T ss_dssp EETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTS-------EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECT
T ss_pred EECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCC-------EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcC
Confidence 9994 566666777776666666777777 899999999 999999998 5666666 5777899999999
Q ss_pred -CCCeEEEEeC-CeEEEEECCCCeEEEEecccCC-----------------ceE-EEEecCCCEEEEE-eCCcEEEEecC
Q 046773 394 -NQGYALMCVE-GVIRVWEVEGGEYMYSFRERIG-----------------EEV-IAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 394 -~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~-----------------~~V-~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++.++++++. ++|+|||+.+++++.++.+|.. ..+ .+++||+++ ++ .|++|+|||+.
T Consensus 261 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 261 TDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp TTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETT
T ss_pred CCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecC
Confidence 9999888877 9999999999999888877641 101 245567666 56 89999999974
No 104
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1e-26 Score=234.75 Aligned_cols=246 Identities=10% Similarity=0.086 Sum_probs=174.5
Q ss_pred CCCCCCCCeEEEEEEecCCEEEEE-----------eCCCcEEEEECCCCeE-EEEecCCCCCccccccceEEEEEEc--C
Q 046773 137 SDVDNPDGLTCRCLTLSDLYLACG-----------FADGAVRLFDLTTRLH-VRTFRPQHSDRLGQFSRAVSGIIIT--D 202 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~~~LaSG-----------S~D~TIrlWD~~tg~~-~~tl~gh~~~~~~~~s~~V~~i~f~--g 202 (453)
.+|. |. |+|++|+++.+++| +.|++||+|++.+++. +.................+++++|+ |
T Consensus 70 ~~~~--~~--v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 70 EDND--DS--PTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp CTTS--CC--CCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred cCCC--Cc--eEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 3777 44 78999999988876 4578899999877643 2211110000000111246667765 6
Q ss_pred CeEEE--EeCCCCEEEEEeecCCcceEE-eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEeccccc
Q 046773 203 SQLIF--ATLDGDIHVAVIDDVANETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLT 279 (453)
Q Consensus 203 ~~Las--gS~D~tIkvWd~~~~g~~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~ 279 (453)
+.|++ ++.|++|||||+.+ +..... .|.+.|. .|+|+|||++ |++++. .++++|+..+++...
T Consensus 146 ~~la~as~~~d~~i~iwd~~~-~~~~~~~~~~~~V~----~v~fspdg~~---l~s~s~-~~~~~~~~~~~~~~~----- 211 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSD-LTEKFEIETRGEVK----DLHFSTDGKV---VAYITG-SSLEVISTVTGSCIA----- 211 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTT-TEEEEEEECSSCCC----EEEECTTSSE---EEEECS-SCEEEEETTTCCEEE-----
T ss_pred CEEEEEECCCCCEEEEeECCC-CcEEEEeCCCCceE----EEEEccCCce---EEeccc-eeEEEEEeccCccee-----
Confidence 67664 45799999999987 522221 2444443 5899999996 778875 557777777776321
Q ss_pred CCcceeeeeeeeeeccceeEEEEcCCce--EEEEcCC----cEEEEECCCCceEE----EEeeccCCeEEEEEEecCCEE
Q 046773 280 DHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACTSS----RVITFDLRNQGMVL----GERGYGRGLYVTSVDVNAEAY 349 (453)
Q Consensus 280 ~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~d~----tIrlWDl~t~~~~~----~~~g~~~~~~v~~~~~~g~~l 349 (453)
..++.+|...|.+|+|+|++. ++++.|+ ++++||+....... .+.+|...+...+|+|+|+.+
T Consensus 212 -------~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l 284 (365)
T 4h5i_A 212 -------RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELA 284 (365)
T ss_dssp -------EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEE
T ss_pred -------eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCce
Confidence 023456788899999998874 4445554 58899998764321 234565556666788889999
Q ss_pred EEEeCCCccccCcceEEEEEcCCCeeEEEE-EecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC
Q 046773 350 IVVENRELENQNRRLAIVRRVDTFEEVCRF-SLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 350 ~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l-~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG 414 (453)
++++.|+ +|+|||+.+++++.++ .+|...|.+++|+||+++++++|. +||||||+.+.
T Consensus 285 asgs~D~-------~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 285 VLASNDN-------SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTS-------CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEcCCC-------EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999 9999999999999886 678889999999999999999987 99999999653
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7e-28 Score=256.05 Aligned_cols=249 Identities=7% Similarity=-0.002 Sum_probs=184.8
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCc
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVAN 224 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~ 224 (453)
|.+++||+ .+|||+|.|+||| |.++++++ .||.. .|..++|+++. .|+++++|+.+. .
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~--------~v~~V~FsPdg-----~~~~~~~~~~~~--~ 77 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSK--------NLFHVKEFPLE-----FENKLDFELAQQ--N 77 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGG--------GTEEEEEECCC-----CCCTTTTSCCCS--S
T ss_pred EEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCc--------cEEEEEECCCC-----CcceEEEEeCCC--c
Confidence 67899986 6999999999999 88777765 67655 56778776544 566666666543 1
Q ss_pred ceEE-eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc-----cee
Q 046773 225 ETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE-----FVG 298 (453)
Q Consensus 225 ~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~-----~v~ 298 (453)
..+. .|...| ..|+|||||++ ||++|.|++|+|||.++ ++ .++. |.. .|.
T Consensus 78 ~~~~~~~~~~V----~~vawSPdG~~---LAs~s~dg~V~iwd~~~--~l--------------~~l~-~~~~~~~~sv~ 133 (588)
T 2j04_A 78 GLLNSQPVCYP----RVCKPSPIDDW---MAVLSNNGNVSVFKDNK--ML--------------TNLD-SKGNLSSRTYH 133 (588)
T ss_dssp CSSTTSCSCCE----EEEEECSSSSC---EEEEETTSCEEEEETTE--EE--------------EECC-CSSCSTTTCEE
T ss_pred eEeecCCCCcE----EEEEECCCCCE---EEEEeCCCcEEEEeCCc--ee--------------eecc-CCCccccccEE
Confidence 2222 233333 25999999997 89999999999999644 22 2344 444 489
Q ss_pred EEEEcCCce--EEEEcCCcEEEEECCCCce-------EEEE----eeccCCeEEEEEEecCCEEEEEeCCCccccCcceE
Q 046773 299 RVRVTSHES--AVACTSSRVITFDLRNQGM-------VLGE----RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 299 ~v~~s~~~~--~vas~d~tIrlWDl~t~~~-------~~~~----~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i 365 (453)
+|+|+|++. ++++.|++|+|||+.++.. +.+. .+|. ..|.+++++++++++++.|+ ++
T Consensus 134 svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~--~~V~sVawSPdgLaass~D~-------tV 204 (588)
T 2j04_A 134 CFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK--DWVTHIVWYEDVLVAALSNN-------SV 204 (588)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC--CCEEEEEEETTEEEEEETTC-------CE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccccc--ccEEEEEEcCCcEEEEeCCC-------eE
Confidence 999999874 5567789999999998752 3443 3343 45555555555588888888 99
Q ss_pred EEEEcCCCee---EEEEE-ecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecccCCceEE--EE--ecCCCE
Q 046773 366 IVRRVDTFEE---VCRFS-LRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERIGEEVI--AF--VGDDRH 437 (453)
Q Consensus 366 ~Iw~~~tg~~---v~~l~-~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~gh~~~~V~--a~--s~d~~~ 437 (453)
++|++++++. .+++. +|...|..++|+ +..++++++++|+|||+.+++......||.+. |+ +| +||+..
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~-V~~va~~~s~d~~~ 281 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLEN-FHIIPLNHEKESTI 281 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSC-CCEEEETTCSSCEE
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCce-EEEEEeeeCCCCCE
Confidence 9999998763 35563 666779999998 57777776799999999998885555589888 76 88 899999
Q ss_pred EEEE-eCCcEEEEecC
Q 046773 438 VAAS-CGTNIHLWDFG 452 (453)
Q Consensus 438 lasg-~D~~IklWDl~ 452 (453)
|+++ .||+ |||.+.
T Consensus 282 La~a~edG~-klw~~d 296 (588)
T 2j04_A 282 LLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEECSSCEE-EEEESS
T ss_pred EEEEcCCCC-EEEeec
Confidence 9999 8999 999864
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.1e-26 Score=233.35 Aligned_cols=240 Identities=14% Similarity=0.148 Sum_probs=169.8
Q ss_pred EEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeC
Q 046773 168 LFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTG 245 (453)
Q Consensus 168 lWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~ 245 (453)
||++.+.+.+.++.+|.. .|.+++|+ |+.|++|+.| .++|||+++ +......+... ...++|.+
T Consensus 3 i~s~~~~~~~~~~~~h~~--------~V~~v~fs~dg~~la~g~~~-~~~iw~~~~-~~~~~~~~~~~----~~~~~~~~ 68 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSN--------PVTDYEFNQDQSCLILSTLK-SFEIYNVHP-VAHIMSQEMRH----LSKVRMLH 68 (355)
T ss_dssp ----------------CC--------CCCEEEECTTSSEEEEECSS-EEEEEEETT-EEEEEEEECSC----CCEEEECT
T ss_pred cccccccCCccccccCCC--------ceEEEEECCCCCEEEEEcCC-EEEEEecCC-cceeeeeecCC----eEEEEEcC
Confidence 688889988888887654 57778885 6788888766 579999876 32222222221 12478888
Q ss_pred CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCC-
Q 046773 246 CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQ- 324 (453)
Q Consensus 246 dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~- 324 (453)
++.. .+++|+.|++|+|||+++++... .+ .|...|.+++++++.++++ .+++|++||+.++
T Consensus 69 ~~~~--~~~~~~~d~~v~iWd~~~~~~~~--------------~~-~~~~~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~ 130 (355)
T 3vu4_A 69 RTNY--VAFVTGVKEVVHIWDDVKKQDVS--------------RI-KVDAPVKDLFLSREFIVVS-YGDVISVFKFGNPW 130 (355)
T ss_dssp TSSE--EEEECSSTTEEEEEETTTTEEEE--------------EE-ECSSCEEEEEECSSEEEEE-ETTEEEEEESSTTC
T ss_pred CCCE--EEEEECCccEEEEEECCCCcEEE--------------EE-ECCCceEEEEEcCCEEEEE-EcCEEEEEECCCCc
Confidence 8775 23578889999999999998431 22 2557899999999876654 5789999999987
Q ss_pred ceEEEEeeccCCeEEEEEEecCCEEEEE--eCCCccccCcceEEEEEcCCCe----------------eEEEEEecCCCe
Q 046773 325 GMVLGERGYGRGLYVTSVDVNAEAYIVV--ENRELENQNRRLAIVRRVDTFE----------------EVCRFSLRADRN 386 (453)
Q Consensus 325 ~~~~~~~g~~~~~~v~~~~~~g~~l~s~--s~dg~~~~~~~~i~Iw~~~tg~----------------~v~~l~~~~~~v 386 (453)
+++.+... ...+.++++ ..++.+ +.++ +|+|||+.+++ ++..+..|...|
T Consensus 131 ~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g-------~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v 198 (355)
T 3vu4_A 131 KRITDDIR---FGGVCEFSN--GLLVYSNEFNLG-------QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI 198 (355)
T ss_dssp CBSSCCEE---EEEEEEEET--TEEEEEESSCTT-------CEEEEECCC------------------CCEEECCCSSCE
T ss_pred eeeEEecc---CCceEEEEc--cEEEEeCCCcCc-------EEEEEECCCCCccccccccccccccCcccEEEEccCCce
Confidence 55444322 233455655 677664 5667 99999999865 267788898889
Q ss_pred eEEEEeeCCCeEEEEeC-Ce-EEEEECCCCeEEEEec-c-cCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 387 VNVMGCMNQGYALMCVE-GV-IRVWEVEGGEYMYSFR-E-RIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 387 ~~~~~~~~~~~lls~s~-~t-IrlWD~~tG~~l~tL~-g-h~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
..+.++|++.++++++. ++ |||||+.+++++++|. | |.+. |+ +|+||+++|+++ .|++|+|||+.
T Consensus 199 ~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~-v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD-VVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC-EEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc-EEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 99999999999999887 98 9999999999999998 6 8888 87 678999999999 99999999984
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=3.8e-27 Score=239.70 Aligned_cols=246 Identities=11% Similarity=0.122 Sum_probs=181.4
Q ss_pred ceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC------------cceEEeee------------cceecCceEEEEeCC
Q 046773 193 RAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA------------NETRTAHF------------GSVMDDGVLIDFTGC 246 (453)
Q Consensus 193 ~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g------------~~~~~~~~------------~~v~~~~~~v~Fs~d 246 (453)
..|.+++|+ ++.||+|+.|++|+|||+.+.. ...+.+|. ..|. .|+|+|+
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~----~l~~~~~ 104 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN----KIRWLPQ 104 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC----EEEECCC
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE----EEEEcCC
Confidence 478889886 6789999999999999998621 23445564 3332 4899999
Q ss_pred C--ceeeEEEEeeCCCeEEEeeCCCCcEE-ecccccCCc-------ce-----------------eee-eeeeeecccee
Q 046773 247 S--RYWVGLYAGLAGRAFHIWDRQAEEVF-VGGDLTDHN-------TV-----------------MGW-RMLTEFTEFVG 298 (453)
Q Consensus 247 g--~~~~~LaSgS~D~tIrvWD~~tg~~~-~g~~l~~~~-------~v-----------------~~w-~~l~~h~~~v~ 298 (453)
+ .. |++++.|++|+|||+.+++.. ....+.++. .+ ... ..+.+|...|.
T Consensus 105 ~~~~~---l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 105 KNAAQ---FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CSSSE---EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred CCcce---EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 8 44 789999999999999875521 100000000 00 000 11368999999
Q ss_pred EEEEcCCce-EEEEcCCcEEEEECCCCceEEE--------EeeccCCeEEEEEEecC-CEEEEEeCCCccccCcceEEEE
Q 046773 299 RVRVTSHES-AVACTSSRVITFDLRNQGMVLG--------ERGYGRGLYVTSVDVNA-EAYIVVENRELENQNRRLAIVR 368 (453)
Q Consensus 299 ~v~~s~~~~-~vas~d~tIrlWDl~t~~~~~~--------~~g~~~~~~v~~~~~~g-~~l~s~s~dg~~~~~~~~i~Iw 368 (453)
+++|+|++. ++++.|++|+|||+++.+.... ..+|...+...+|+|++ +.+++++.|+ +|+||
T Consensus 182 ~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-------~i~iw 254 (447)
T 3dw8_B 182 SISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-------TIRLC 254 (447)
T ss_dssp EEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-------CEEEE
T ss_pred EEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-------eEEEE
Confidence 999998764 3334678999999995433222 23555555556677777 8899999999 99999
Q ss_pred EcCCCee----EEEEEecCC------------CeeEEEEeeCCCeEEEEeCCeEEEEECCC-CeEEEEecccCCceE---
Q 046773 369 RVDTFEE----VCRFSLRAD------------RNVNVMGCMNQGYALMCVEGVIRVWEVEG-GEYMYSFRERIGEEV--- 428 (453)
Q Consensus 369 ~~~tg~~----v~~l~~~~~------------~v~~~~~~~~~~~lls~s~~tIrlWD~~t-G~~l~tL~gh~~~~V--- 428 (453)
|+.+++. +..+..+.+ .+..+.+++++.++++++.++|+|||+.+ ++++.++.+|....-
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~ 334 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLC 334 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHH
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccc
Confidence 9999876 677877765 79999999999998877779999999998 999999999864200
Q ss_pred -------------EEEecCCCEEEEE-eCCcEEEEecC
Q 046773 429 -------------IAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 429 -------------~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+|+||+++|+++ .|++|+|||+.
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 3789999999999 99999999974
No 108
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=7.3e-28 Score=240.21 Aligned_cols=231 Identities=10% Similarity=0.002 Sum_probs=173.9
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecCC---cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCC
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDVA---NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQ 268 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g---~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~ 268 (453)
.|.+++|+ ++.|++|+.|++|+|||+.+.. ..++.+|.+.+. .++|+|+|++ |++|+.|++|+|||++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~----~~~~s~~~~~---l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT----CVDWAPKSNR---IVTCSQDRNAYVYEKR 85 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE----EEEECTTTCC---EEEEETTSSEEEC---
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE----EEEEeCCCCE---EEEEeCCCeEEEEEcC
Confidence 45566665 7789999999999999998721 355566766554 4899999986 8899999999999999
Q ss_pred CCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCc---eEEEEee-ccCCeEEEEE
Q 046773 269 AEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQG---MVLGERG-YGRGLYVTSV 342 (453)
Q Consensus 269 tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~---~~~~~~g-~~~~~~v~~~ 342 (453)
+++.+. ....+.+|...|.+++|+|++ +++++.|++|++||+++++ +...+.+ |...+...++
T Consensus 86 ~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 86 PDGTWK-----------QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp ---CCC-----------CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred CCCcee-----------eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 876110 012456788999999999865 5667788999999999876 3444544 6666666667
Q ss_pred EecCCEEEEEeCCCccccCcceEEEEEcC------------------CCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-
Q 046773 343 DVNAEAYIVVENRELENQNRRLAIVRRVD------------------TFEEVCRFSLRADRNVNVMGCMNQGYALMCVE- 403 (453)
Q Consensus 343 ~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~------------------tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~- 403 (453)
+++++.+++++.|+ +++||++. +++++..+ .|...+..+.++|++.++++++.
T Consensus 155 ~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 155 HPNNVLLAAGCADR-------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp CTTSSEEEEEESSS-------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT
T ss_pred cCCCCEEEEEeCCC-------EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC
Confidence 77888999999999 99999985 34566666 67777999999999999998887
Q ss_pred CeEEEEECCCCeE----EEEecccCCceEE--EEecCCCEEEEEeCCcEEEEec
Q 046773 404 GVIRVWEVEGGEY----MYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDF 451 (453)
Q Consensus 404 ~tIrlWD~~tG~~----l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl 451 (453)
++|+|||+.++++ +.++.+|.+. |. +|+||+++|+++.|+.+.+|+.
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~~~~~~~~~ 279 (377)
T 3dwl_C 227 SSVTIAYPSAPEQPPRALITVKLSQLP-LRSLLWANESAIVAAGYNYSPILLQG 279 (377)
T ss_dssp TEEC-CEECSTTSCEEECCCEECSSSC-EEEEEEEETTEEEEEESSSSEEEECC
T ss_pred CcEEEEECCCCCCcceeeEeecCCCCc-eEEEEEcCCCCEEEEEcCCcEEEEEe
Confidence 9999999999988 8899999988 77 6789999999994445557765
No 109
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=2.1e-26 Score=227.78 Aligned_cols=232 Identities=11% Similarity=0.031 Sum_probs=186.3
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecC---CcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCC
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDV---ANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQ 268 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~---g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~ 268 (453)
.|.+++|+ ++.|++|+.|++|+|||+++. -...+..|...+. .++|+|++++ |++|+.|++|+|||++
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~---l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT----GVDWAPDSNR---IVTCGTDRNAYVWTLK 82 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE----EEEEETTTTE---EEEEETTSCEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc----EEEEeCCCCE---EEEEcCCCeEEEEECC
Confidence 56778775 678999999999999999872 1344455655543 4899999986 8899999999999999
Q ss_pred CCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCce---EEEE-eeccCCeEEEEE
Q 046773 269 AEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGM---VLGE-RGYGRGLYVTSV 342 (453)
Q Consensus 269 tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~---~~~~-~g~~~~~~v~~~ 342 (453)
+++...- ..+..|...|.+++|+|++ +++++.|++|++||++++.. .... .+|...+...++
T Consensus 83 ~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 83 GRTWKPT------------LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp TTEEEEE------------EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred CCeeeee------------EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 8873210 1245678899999999876 45556789999999998762 2222 445555555566
Q ss_pred EecCCEEEEEeCCCccccCcceEEEEEc------------------CCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-
Q 046773 343 DVNAEAYIVVENRELENQNRRLAIVRRV------------------DTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE- 403 (453)
Q Consensus 343 ~~~g~~l~s~s~dg~~~~~~~~i~Iw~~------------------~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~- 403 (453)
+++++.+++++.|+ .++|||+ .+++++..+..|...+..+.+++++.++++++.
T Consensus 151 ~~~~~~l~~~~~dg-------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 151 HPNSVLLAAGSCDF-------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp CTTSSEEEEEETTS-------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred cCCCCEEEEEcCCC-------CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC
Confidence 77888999999999 9999994 467888888878888999999999999988887
Q ss_pred CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 404 GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 404 ~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
++|++||+.+++++.++.+|... |. +|+||+++|+++.|+.|+|||+.
T Consensus 224 ~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~d~~i~i~~~~ 273 (372)
T 1k8k_C 224 STVCLADADKKMAVATLASETLP-LLAVTFITESSLVAAGHDCFPVLFTYD 273 (372)
T ss_dssp TEEEEEEGGGTTEEEEEECSSCC-EEEEEEEETTEEEEEETTSSCEEEEEE
T ss_pred CEEEEEECCCCceeEEEccCCCC-eEEEEEecCCCEEEEEeCCeEEEEEcc
Confidence 99999999999999999999888 77 67899999988899999999974
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=6.3e-27 Score=238.24 Aligned_cols=238 Identities=13% Similarity=0.051 Sum_probs=158.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEE-----EEecCCCCCccccccceEEEEEE----------cCCeEEEEeCCCCEEEEE
Q 046773 154 DLYLACGFADGAVRLFDLTTRLHV-----RTFRPQHSDRLGQFSRAVSGIII----------TDSQLIFATLDGDIHVAV 218 (453)
Q Consensus 154 ~~~LaSGS~D~TIrlWD~~tg~~~-----~tl~gh~~~~~~~~s~~V~~i~f----------~g~~LasgS~D~tIkvWd 218 (453)
+.+|||||.|+||||||++++++. .+|.||.. .|.+++| +++.|||||.|+||||||
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~--------~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN--------FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS--------CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC--------ceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 368999999999999999999764 34677654 6888888 467899999999999999
Q ss_pred eecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEE---ecccccCCccee--------e
Q 046773 219 IDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVF---VGGDLTDHNTVM--------G 286 (453)
Q Consensus 219 ~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~---~g~~l~~~~~v~--------~ 286 (453)
+.+.+ ...+..|...+. .|+|+|++.. .|++|+.|++|||||+++++.. ..+......... .
T Consensus 173 ~~~~~~~~~~~~~~~~v~----~v~~~p~~~~--~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGI----SVQFRPSNPN--QLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EETTEEEEEEEECSSCEE----EEEEETTEEE--EEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred CCCCceeeeecCCCCCcE----EEEECCCCCc--eEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 98733 334445555543 5999999864 4899999999999999998721 111000000000 0
Q ss_pred eeeeeeeccceeEEEEc-CCc--eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEE------------------EEEec
Q 046773 287 WRMLTEFTEFVGRVRVT-SHE--SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVT------------------SVDVN 345 (453)
Q Consensus 287 w~~l~~h~~~v~~v~~s-~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~------------------~~~~~ 345 (453)
-....+|.+.|.+|+++ +++ +++++.|++|++||+.++.....+.+|....... .+.+.
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 01245788899999986 454 4445667999999999876544333222111111 12222
Q ss_pred -CC-EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECC
Q 046773 346 -AE-AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVE 412 (453)
Q Consensus 346 -g~-~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~ 412 (453)
++ .+++++.|+ +|+|||..+++++..+..+...|++++|+|++++|++++++.+.||.+.
T Consensus 327 ~~~~~~~sgs~Dg-------~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 327 YMDYFATAHSQHG-------LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp CTTEEEEEETTTT-------EEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred CCCEEEEEECCCC-------EEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 22 346667788 9999999999988888888888999999999999998888667777653
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.4e-25 Score=227.91 Aligned_cols=265 Identities=9% Similarity=0.054 Sum_probs=198.6
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEE-----ecCCCCCccccccceEEEEEE--cCCeEEEEeCCCCEEEE
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRT-----FRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGDIHVA 217 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~t-----l~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~tIkvW 217 (453)
+.+++|++ .++++++.|++|++||+.++++++. +.+|.. .|.+++| ++..+++++.|++|++|
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG--------FVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC--------EEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC--------ceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 45788875 5788889999999999999999884 334432 6778888 46789999999999999
Q ss_pred EeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc
Q 046773 218 VIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE 295 (453)
Q Consensus 218 d~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~ 295 (453)
|+++ + ...+..|...+ ..++|+|+|+. .+++++.|++|++||+++++... .+..+ .
T Consensus 197 d~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~--l~~~~~~~~~i~~~d~~~~~~~~--------------~~~~~-~ 254 (433)
T 3bws_A 197 DLKT-LAYKATVDLTGKWS----KILLYDPIRDL--VYCSNWISEDISVIDRKTKLEIR--------------KTDKI-G 254 (433)
T ss_dssp ETTT-CCEEEEEECSSSSE----EEEEEETTTTE--EEEEETTTTEEEEEETTTTEEEE--------------ECCCC-S
T ss_pred ECCC-ceEEEEEcCCCCCe----eEEEEcCCCCE--EEEEecCCCcEEEEECCCCcEEE--------------EecCC-C
Confidence 9987 4 23333343333 24899999986 24677789999999999988432 12222 3
Q ss_pred ceeEEEEcCCc--eEEEE--------cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEE-EEEeCCCccccCcce
Q 046773 296 FVGRVRVTSHE--SAVAC--------TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAY-IVVENRELENQNRRL 364 (453)
Q Consensus 296 ~v~~v~~s~~~--~~vas--------~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l-~s~s~dg~~~~~~~~ 364 (453)
.+.+++++|++ +++++ .|++|++||+++++.+... .+.......+++++++.+ ++++.++ .
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~-------~ 326 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCS-------K 326 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTT-------E
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCC-------E
Confidence 47889999876 34444 2678999999998655443 232234445677778655 5557778 9
Q ss_pred EEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC----------------CeEEEEECCCCeEEEEecccCCceE
Q 046773 365 AIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE----------------GVIRVWEVEGGEYMYSFRERIGEEV 428 (453)
Q Consensus 365 i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~----------------~tIrlWD~~tG~~l~tL~gh~~~~V 428 (453)
+++|+.++++.+..+. +...+..+.++++++++++++. ++|++||+++++.+..+.++. . +
T Consensus 327 v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-~-~ 403 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-Q-P 403 (433)
T ss_dssp EEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-S-E
T ss_pred EEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC-C-C
Confidence 9999999998887776 4556889999999988877654 399999999999999988754 3 4
Q ss_pred E--EEecCCCEEEEE--eCCcEEEEecC
Q 046773 429 I--AFVGDDRHVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 429 ~--a~s~d~~~lasg--~D~~IklWDl~ 452 (453)
. +|+||+++|+++ .|++|+|||+.
T Consensus 404 ~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 4 778999998766 49999999975
No 112
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.6e-25 Score=217.43 Aligned_cols=238 Identities=10% Similarity=0.065 Sum_probs=188.4
Q ss_pred EEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeE
Q 046773 176 HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVG 252 (453)
Q Consensus 176 ~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~ 252 (453)
...+|.+|.. .|.+++|+ ++.|++|+.|++|+|||+.+.. +..+..|...+. .++|+|++++
T Consensus 24 ~~~~l~~h~~--------~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~----~~~~~~~~~~--- 88 (369)
T 3zwl_B 24 KAIKLTGHER--------PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW----SIDVDCFTKY--- 88 (369)
T ss_dssp EEEEEECCSS--------CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE----EEEECTTSSE---
T ss_pred ccEEEEEeec--------eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE----EEEEcCCCCE---
Confidence 3456777754 68888885 6789999999999999998722 455556766553 4899999986
Q ss_pred EEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce--EEEEcC-----CcEEEEECCCCc
Q 046773 253 LYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACTS-----SRVITFDLRNQG 325 (453)
Q Consensus 253 LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~d-----~tIrlWDl~t~~ 325 (453)
|++++.|++|+|||+++++... .+. +...+.+++|+|++. ++++.+ +.|++||++++.
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~--------------~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQCVA--------------TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp EEEEETTTEEEEEETTTCCEEE--------------EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred EEEEeCCCeEEEEECCCCcEEE--------------Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 7899999999999999988432 122 667899999998774 444556 899999998764
Q ss_pred eE-----------EEEeeccC--CeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCC-CeeEEEEEecCCCeeEEEE
Q 046773 326 MV-----------LGERGYGR--GLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDT-FEEVCRFSLRADRNVNVMG 391 (453)
Q Consensus 326 ~~-----------~~~~g~~~--~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~t-g~~v~~l~~~~~~v~~~~~ 391 (453)
.. .....|.. .....+++++++.+++++.++ .+++||+.+ ++.+..+..+...+..+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 226 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG-------KISKYDVSNNYEYVDSIDLHEKSISDMQF 226 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS-------EEEEEETTTTTEEEEEEECCSSCEEEEEE
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC-------EEEEEECCCCcEeEEEEecCCCceeEEEE
Confidence 21 11223333 455566788889999999999 999999998 7888888888888999999
Q ss_pred eeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCC--------------cEEEEecC
Q 046773 392 CMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGT--------------NIHLWDFG 452 (453)
Q Consensus 392 ~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~--------------~IklWDl~ 452 (453)
++++.++++++. ++|++||+.+++++..+. +... +. +++|+++.|+++ .|+ .|++||+.
T Consensus 227 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 227 SPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCP-LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSC-EEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred CCCCCEEEEecCCceEEEEECCCCceeeeec-CCCC-ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 999999988877 999999999999999987 4444 55 778999999988 777 89999874
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.8e-25 Score=219.57 Aligned_cols=244 Identities=11% Similarity=0.122 Sum_probs=188.1
Q ss_pred EEECCCCeEEEEecCCCCCccccccceEEEEEEcC-----CeEEEEeCCCCEEEEEeecCC--c-ceEEeeecceecCce
Q 046773 168 LFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD-----SQLIFATLDGDIHVAVIDDVA--N-ETRTAHFGSVMDDGV 239 (453)
Q Consensus 168 lWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g-----~~LasgS~D~tIkvWd~~~~g--~-~~~~~~~~~v~~~~~ 239 (453)
.|+....+.++.+.+|.. .|.+++|++ ..|++|+.|++|+|||+++.+ + ..+..|.+.+.
T Consensus 23 ~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~---- 90 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDD--------SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL---- 90 (368)
T ss_dssp CCSSCTTCCEECSSCCSS--------CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE----
T ss_pred cCCCCCcceeEeccCCCC--------ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE----
Confidence 445667778888888754 688899874 579999999999999998733 2 45566766654
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEE--cCCc--eEEEEcCCc
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRV--TSHE--SAVACTSSR 315 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~--s~~~--~~vas~d~t 315 (453)
.++|+|++++ |++|+.|++|+|||+++++.. .+.+|...|.+++| ++++ +++++.|++
T Consensus 91 ~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~---------------~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 152 (368)
T 3mmy_A 91 DVCWSDDGSK---VFTASCDKTAKMWDLSSNQAI---------------QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKT 152 (368)
T ss_dssp EEEECTTSSE---EEEEETTSEEEEEETTTTEEE---------------EEEECSSCEEEEEEEECSSCEEEEEEETTSE
T ss_pred EEEECcCCCE---EEEEcCCCcEEEEEcCCCCce---------------eeccccCceEEEEEEeCCCCCEEEEccCCCc
Confidence 4899999996 889999999999999998843 24568899999999 7776 455567899
Q ss_pred EEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEe--cCCCeeEEEEee
Q 046773 316 VITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL--RADRNVNVMGCM 393 (453)
Q Consensus 316 IrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~--~~~~v~~~~~~~ 393 (453)
|++||+++++++.....+. .+.++++.+..+++++.++ .+++|++........... .......+.+.+
T Consensus 153 i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPE---RCYCADVIYPMAVVATAER-------GLIVYQLENQPSEFRRIESPLKHQHRCVAIFK 222 (368)
T ss_dssp EEEECSSCSSCSEEEECSS---CEEEEEEETTEEEEEEGGG-------CEEEEECSSSCEEEEECCCSCSSCEEEEEEEE
T ss_pred EEEEECCCCcEEEEEecCC---CceEEEecCCeeEEEeCCC-------cEEEEEeccccchhhhccccccCCCceEEEcc
Confidence 9999999988766654443 3577788888999999999 999999987643332211 122344455555
Q ss_pred CCCe----EEEEeC-CeEEEEECCCC---eEEEEecccCC------------ceEE--EEecCCCEEEEE-eCCcEEEEe
Q 046773 394 NQGY----ALMCVE-GVIRVWEVEGG---EYMYSFRERIG------------EEVI--AFVGDDRHVAAS-CGTNIHLWD 450 (453)
Q Consensus 394 ~~~~----lls~s~-~tIrlWD~~tG---~~l~tL~gh~~------------~~V~--a~s~d~~~lasg-~D~~IklWD 450 (453)
+... +++++. ++|+|||+.++ +++.++.+|.. . |. +|+||+++|+++ .|++|+|||
T Consensus 223 ~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 223 DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYA-VNGIAFHPVHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECC-EEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred cCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccc-eEEEEEecCCCEEEEEccCCeEEEEE
Confidence 4433 667766 99999999988 67888888875 4 76 678999999999 999999999
Q ss_pred cC
Q 046773 451 FG 452 (453)
Q Consensus 451 l~ 452 (453)
+.
T Consensus 302 ~~ 303 (368)
T 3mmy_A 302 KD 303 (368)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=2.8e-26 Score=232.38 Aligned_cols=238 Identities=11% Similarity=0.092 Sum_probs=182.4
Q ss_pred CCCCCCCeEEEEEEecC---CEEEEEeCCCcEEEEECCCC-------eEEEEecCCCCCccccccceEEEEEEc--C-Ce
Q 046773 138 DVDNPDGLTCRCLTLSD---LYLACGFADGAVRLFDLTTR-------LHVRTFRPQHSDRLGQFSRAVSGIIIT--D-SQ 204 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~---~~LaSGS~D~TIrlWD~~tg-------~~~~tl~gh~~~~~~~~s~~V~~i~f~--g-~~ 204 (453)
||..+ |+|++|++ ++||||+.|++|+|||+.++ +++.++.+|.. .|.+++|+ + ..
T Consensus 79 ~h~~~----V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~--------~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 79 GHTAP----VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK--------RVGIVAWHPTAQNV 146 (402)
T ss_dssp CCSSC----EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS--------CEEEEEECSSBTTE
T ss_pred cCCCC----EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC--------eEEEEEECcCCCCE
Confidence 78854 89999975 59999999999999999999 67888988764 68888886 3 47
Q ss_pred EEEEeCCCCEEEEEeecCC--cceE--EeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccC
Q 046773 205 LIFATLDGDIHVAVIDDVA--NETR--TAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTD 280 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~g--~~~~--~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~ 280 (453)
|++|+.|++|+|||+.+ + ...+ ..|...+. .++|+|+|++ |++++.|++|+|||+++++..
T Consensus 147 l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~----~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~------- 211 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGT-GAAVLTLGPDVHPDTIY----SVDWSRDGAL---ICTSCRDKRVRVIEPRKGTVV------- 211 (402)
T ss_dssp EEEEETTSCEEEEETTT-TEEEEEECTTTCCSCEE----EEEECTTSSC---EEEEETTSEEEEEETTTTEEE-------
T ss_pred EEEEcCCCEEEEEECCC-CCccEEEecCCCCCceE----EEEECCCCCE---EEEEecCCcEEEEeCCCCcee-------
Confidence 99999999999999987 4 2333 33555443 4899999986 889999999999999998843
Q ss_pred Ccceeeeeee-eeeccc-eeEEEEcCCceEEEE-----cCCcEEEEECCCCceEEE-E-eeccCCeEEEEEEecCCEEEE
Q 046773 281 HNTVMGWRML-TEFTEF-VGRVRVTSHESAVAC-----TSSRVITFDLRNQGMVLG-E-RGYGRGLYVTSVDVNAEAYIV 351 (453)
Q Consensus 281 ~~~v~~w~~l-~~h~~~-v~~v~~s~~~~~vas-----~d~tIrlWDl~t~~~~~~-~-~g~~~~~~v~~~~~~g~~l~s 351 (453)
..+ .+|.+. +.++.|+|++.++++ .|++|++||+++++.... . ..+...+...+++++++.+++
T Consensus 212 -------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 212 -------AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp -------EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred -------eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEE
Confidence 123 456554 788999988865543 468999999998765222 2 234445556678888888865
Q ss_pred E-eCCCccccCcceEEEEEcCCCee-EEEEEec--CCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEE
Q 046773 352 V-ENRELENQNRRLAIVRRVDTFEE-VCRFSLR--ADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYM 417 (453)
Q Consensus 352 ~-s~dg~~~~~~~~i~Iw~~~tg~~-v~~l~~~--~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l 417 (453)
+ +.|+ +|+||++.+++. +..+..+ ...+..+.++|++.+++ ++++++++|++.++++.
T Consensus 285 ~g~~dg-------~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~-s~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 285 CGKGDS-------SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV-NKCEIARFYKLHERKCE 346 (402)
T ss_dssp EETTCS-------CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG-GGTEEEEEEEEETTEEE
T ss_pred EEcCCC-------eEEEEEecCCCcceEeecccccCCcccceEEecccccce-ecceeEEEEEcCCCcEE
Confidence 4 4688 999999998874 5555544 36689999999887654 33489999999998763
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2e-26 Score=254.42 Aligned_cols=239 Identities=10% Similarity=0.052 Sum_probs=185.0
Q ss_pred CCCCCCCCeEEEEEEecC--CEEEEEeCCCcEEEEECC--CCeEEEEecCCCCCccccccceEEEEEEc----CCeEEEE
Q 046773 137 SDVDNPDGLTCRCLTLSD--LYLACGFADGAVRLFDLT--TRLHVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLIFA 208 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~--~~LaSGS~D~TIrlWD~~--tg~~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~Lasg 208 (453)
.||..+ |+|++|++ ++||+|+.|++|+|||+. +++++.++.+|.. .|.+++|+ ++.|++|
T Consensus 6 ~gH~~~----V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~--------~V~~l~~s~~~~~~~l~s~ 73 (753)
T 3jro_A 6 NAHNEL----IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG--------PVWRVDWAHPKFGTILASC 73 (753)
T ss_dssp --CCCC----EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSS--------CEEEEEECCTTSCSEEEEE
T ss_pred ccCcce----eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcC--------ceEEEEecCCCCCCEEEEE
Confidence 489855 89999985 689999999999999998 6788999998754 68889885 6789999
Q ss_pred eCCCCEEEEEeecCC----cceEEeeecceecCceEEEEeCC--CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCc
Q 046773 209 TLDGDIHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGC--SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 209 S~D~tIkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~d--g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
+.|++|++||+.+ + ...+..|...+. .++|+|+ |+. |++|+.|++|+|||++++....
T Consensus 74 s~Dg~I~vwd~~~-~~~~~~~~~~~h~~~V~----~v~~sp~~~~~~---l~sgs~dg~I~vwdl~~~~~~~-------- 137 (753)
T 3jro_A 74 SYDGKVLIWKEEN-GRWSQIAVHAVHSASVN----SVQWAPHEYGPL---LLVASSDGKVSVVEFKENGTTS-------- 137 (753)
T ss_dssp ETTSCEEEEEEET-TEEEEEEEECCCSSCEE----EEEECCGGGCSE---EEEEETTSEEEEEECCSSSCCC--------
T ss_pred eCCCeEEEEECCC-CcccccccccCCCCCeE----EEEECCCCCCCE---EEEEeCCCcEEEEEeecCCCcc--------
Confidence 9999999999987 4 123334544443 5899999 875 8899999999999999874110
Q ss_pred ceeeeeeeeeeccceeEEEEcCC-------------c--eEEEEcCCcEEEEECCCCc----eEEEEeeccCCeEEEEEE
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSH-------------E--SAVACTSSRVITFDLRNQG----MVLGERGYGRGLYVTSVD 343 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~-------------~--~~vas~d~tIrlWDl~t~~----~~~~~~g~~~~~~v~~~~ 343 (453)
-..+.+|...|.++.|+|. + +++++.|++|++||++++. +.....+|...+...+++
T Consensus 138 ----~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 138 ----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp ----CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred ----eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence 0235678889999999883 2 5666778999999999874 233345666666666677
Q ss_pred ec---CCEEEEEeCCCccccCcceEEEEEcCCCee-----EEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC
Q 046773 344 VN---AEAYIVVENRELENQNRRLAIVRRVDTFEE-----VCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 344 ~~---g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~-----v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG 414 (453)
|+ ++.+++++.|+ +|+||+..+++. +.....+...+..+.++|++.++++++. ++|+|||+.++
T Consensus 214 p~~~~~~~l~s~s~Dg-------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 214 PTVLLRSYLASVSQDR-------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCCSSSEEEEEEESSS-------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred cCCCCCCEEEEEecCC-------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 77 77899999999 999999988642 2222235566888999999999988877 99999999853
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.1e-25 Score=226.24 Aligned_cols=208 Identities=13% Similarity=0.027 Sum_probs=147.0
Q ss_pred EEEEEecCC------EEEEEeCCCcEEEEECCCCeEEEEe-cCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEe
Q 046773 147 CRCLTLSDL------YLACGFADGAVRLFDLTTRLHVRTF-RPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVI 219 (453)
Q Consensus 147 v~~lafs~~------~LaSGS~D~TIrlWD~~tg~~~~tl-~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~ 219 (453)
|++|+|+++ ++++++ ++++||++.+|+.+.+. .| .|++|++|++
T Consensus 114 v~sla~spd~~~~~~~l~s~g--~~~~v~~l~~g~lv~ss~~g---------------------------~d~~V~~~~~ 164 (356)
T 2w18_A 114 IRALFCSSDDESEKQVLLKSG--NIKAVLGLTKRRLVSSSGTL---------------------------SDQQVEVMTF 164 (356)
T ss_dssp EEEECC------CCEEEEEEE--EEEEEEEETTTEEEEEESSS---------------------------TTCEEEEEEE
T ss_pred eEEEEECCCccccccEEEeCC--CeEEEEecCCCcEEEecccC---------------------------CCCcEEEEEE
Confidence 666777654 566666 33777777666655442 22 3677888888
Q ss_pred ecCC--cceEEeeecceecCceEEEEeC---CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee-
Q 046773 220 DDVA--NETRTAHFGSVMDDGVLIDFTG---CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF- 293 (453)
Q Consensus 220 ~~~g--~~~~~~~~~~v~~~~~~v~Fs~---dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h- 293 (453)
...| +..+.+|...+. .++|+| ++.. |+|||.|+||||||++||+++ ++|.+|
T Consensus 165 s~dG~~~~s~~~~~~~v~----~l~fs~~~g~~~~---LaSgS~D~TIkIWDl~TGk~l--------------~tL~g~~ 223 (356)
T 2w18_A 165 AEDGGGKENQFLMPPEET----ILTFAEVQGMQEA---LLGTTIMNNIVIWNLKTGQLL--------------KKMHIDD 223 (356)
T ss_dssp CTTSCEEEEEEECCCSSC----EEEEEEEETSTTE---EEEEETTSEEEEEETTTCCEE--------------EEEECCC
T ss_pred CCCCceeeeeccCCCcee----eEEeeccCCCCce---EEEecCCCcEEEEECCCCcEE--------------EEEcCCC
Confidence 5435 344556655432 578888 6675 899999999999999999854 234333
Q ss_pred --ccceeEEEEcCCceEE--------------EEcCCcEEEEECCCCceEEEEe---eccCCeEEEEEEecCCEEEEEeC
Q 046773 294 --TEFVGRVRVTSHESAV--------------ACTSSRVITFDLRNQGMVLGER---GYGRGLYVTSVDVNAEAYIVVEN 354 (453)
Q Consensus 294 --~~~v~~v~~s~~~~~v--------------as~d~tIrlWDl~t~~~~~~~~---g~~~~~~v~~~~~~g~~l~s~s~ 354 (453)
...+.+++|+|++..+ ++.|.+||+||+.+++++.... ..+|...+.+.++++..+++++.
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~ 303 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILT 303 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEET
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcC
Confidence 2456777899877532 3457899999999987765431 11222234566777888999999
Q ss_pred CCccccCcceEEEEEcCCCeeEEEEEecCCCee-EEEEeeCCCeEEEEeC-CeEEEEEC
Q 046773 355 RELENQNRRLAIVRRVDTFEEVCRFSLRADRNV-NVMGCMNQGYALMCVE-GVIRVWEV 411 (453)
Q Consensus 355 dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~-~~~~~~~~~~lls~s~-~tIrlWD~ 411 (453)
|+ +|||||+.+++++.++..|.+.+. .++|+|++.++++++. ++|||||+
T Consensus 304 Dg-------TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SG-------TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TS-------CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CC-------cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99 999999999999999988876655 5889999999999987 99999996
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.4e-25 Score=230.51 Aligned_cols=243 Identities=12% Similarity=0.116 Sum_probs=182.0
Q ss_pred CCCCCCCeEEEEEEecCC---EEEEEeCCCcEEEEECCC----------CeEEEEecCCCCCccccccceEEEEEEcCCe
Q 046773 138 DVDNPDGLTCRCLTLSDL---YLACGFADGAVRLFDLTT----------RLHVRTFRPQHSDRLGQFSRAVSGIIITDSQ 204 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~~---~LaSGS~D~TIrlWD~~t----------g~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~ 204 (453)
+|..+ |++++|+++ +||+|+.|++|+|||+.+ .+++.++.+|
T Consensus 126 ~h~~~----v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h--------------------- 180 (430)
T 2xyi_A 126 NHEGE----VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH--------------------- 180 (430)
T ss_dssp EESSC----CSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC---------------------
T ss_pred cCCCc----EEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC---------------------
Confidence 57633 789999873 899999999999999987 3333444333
Q ss_pred EEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcce
Q 046773 205 LIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTV 284 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v 284 (453)
...+. .|+|+|+++. .|++|+.|++|+|||+.++.... ..+
T Consensus 181 --------------------------~~~v~----~l~~~~~~~~--~l~s~~~dg~i~vwd~~~~~~~~-------~~~ 221 (430)
T 2xyi_A 181 --------------------------QKEGY----GLSWNPNLNG--YLLSASDDHTICLWDINATPKEH-------RVI 221 (430)
T ss_dssp --------------------------SSCCC----CEEECTTSTT--EEEEECTTSCEEEEETTSCCBGG-------GEE
T ss_pred --------------------------CCCeE----EEEeCCCCCC--eEEEEeCCCeEEEEeCCCCCCCC-------cee
Confidence 22221 3788888772 27899999999999998743100 000
Q ss_pred eeeeeeeeeccceeEEEEcC-Cc-e-EEEEcCCcEEEEECCCC---ceEEEEeeccCCeEEEEEEecCC-EEEEEeCCCc
Q 046773 285 MGWRMLTEFTEFVGRVRVTS-HE-S-AVACTSSRVITFDLRNQ---GMVLGERGYGRGLYVTSVDVNAE-AYIVVENREL 357 (453)
Q Consensus 285 ~~w~~l~~h~~~v~~v~~s~-~~-~-~vas~d~tIrlWDl~t~---~~~~~~~g~~~~~~v~~~~~~g~-~l~s~s~dg~ 357 (453)
.....+.+|...|.+++|+| +. + ++++.|++|++||++++ .++.....|...+...+|++++. .+++++.|+
T Consensus 222 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg- 300 (430)
T 2xyi_A 222 DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK- 300 (430)
T ss_dssp ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-
T ss_pred ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-
Confidence 00134668889999999997 33 3 34456899999999987 34444456666655566667666 588999999
Q ss_pred cccCcceEEEEEcCC-CeeEEEEEecCCCeeEEEEeeCCCe-EEEEeC-CeEEEEECCC--------------CeEEEEe
Q 046773 358 ENQNRRLAIVRRVDT-FEEVCRFSLRADRNVNVMGCMNQGY-ALMCVE-GVIRVWEVEG--------------GEYMYSF 420 (453)
Q Consensus 358 ~~~~~~~i~Iw~~~t-g~~v~~l~~~~~~v~~~~~~~~~~~-lls~s~-~tIrlWD~~t--------------G~~l~tL 420 (453)
+|+|||+.+ .+++..+..|...+..+.++|++.+ +++++. ++|+|||+.+ .+++..+
T Consensus 301 ------~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 374 (430)
T 2xyi_A 301 ------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 374 (430)
T ss_dssp ------EEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC
T ss_pred ------eEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEc
Confidence 999999998 5678888888888999999999865 555555 9999999987 4778888
Q ss_pred cccCCceEE--EEecCCC-EEEEE-eCCcEEEEecC
Q 046773 421 RERIGEEVI--AFVGDDR-HVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 421 ~gh~~~~V~--a~s~d~~-~lasg-~D~~IklWDl~ 452 (453)
.+|.+. |. +++|+++ .|+++ .|++|+||++.
T Consensus 375 ~~h~~~-v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 375 GGHTAK-ISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CCCSSC-EEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCCC-ceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999988 87 6679998 88888 99999999974
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=2.3e-25 Score=218.01 Aligned_cols=226 Identities=17% Similarity=0.084 Sum_probs=178.6
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecCC----cceEEeeecceecCceEEEEeCCCc-eeeEEEEeeCCCeEEEee
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGCSR-YWVGLYAGLAGRAFHIWD 266 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~dg~-~~~~LaSgS~D~tIrvWD 266 (453)
.|.+++|+ +..|++|+.|++|+||++.+.. ......|...+. .++|+|+++ + |++|+.|++|+|||
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~~---l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL----CCNFIDNTDLQ---IYVGTVQGEILKVD 85 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE----EEEEEESSSEE---EEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE----EEEECCCCCcE---EEEEcCCCeEEEEE
Confidence 68888875 6789999999999999998732 233344544443 489999998 6 78999999999999
Q ss_pred C-CCCcEEecccccCCcceeeeeeeee--eccceeEEEEcCCc-eEEEEcCCcEEEEECCC---------CceEEEEeec
Q 046773 267 R-QAEEVFVGGDLTDHNTVMGWRMLTE--FTEFVGRVRVTSHE-SAVACTSSRVITFDLRN---------QGMVLGERGY 333 (453)
Q Consensus 267 ~-~tg~~~~g~~l~~~~~v~~w~~l~~--h~~~v~~v~~s~~~-~~vas~d~tIrlWDl~t---------~~~~~~~~g~ 333 (453)
+ ++++.. .+.+ |...|.+++|+|.. +++++.|++|++||+++ ++++....
T Consensus 86 ~~~~~~~~---------------~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 148 (342)
T 1yfq_A 86 LIGSPSFQ---------------ALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-- 148 (342)
T ss_dssp SSSSSSEE---------------ECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--
T ss_pred eccCCceE---------------eccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--
Confidence 9 888742 3456 88999999999733 45556789999999987 55443332
Q ss_pred cCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCC-Cee--EEEEEecCCCeeEEEEee-CCCeEEEEeC-CeEEE
Q 046773 334 GRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDT-FEE--VCRFSLRADRNVNVMGCM-NQGYALMCVE-GVIRV 408 (453)
Q Consensus 334 ~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~t-g~~--v~~l~~~~~~v~~~~~~~-~~~~lls~s~-~tIrl 408 (453)
+...+.++.++++.+++++.++ .++||++.+ +.. ......+...+..+.+++ ++.++++++. ++|+|
T Consensus 149 -~~~~v~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 220 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSRLIVGMNNS-------QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV 220 (342)
T ss_dssp -SCCCEEEEEECSSEEEEEESTT-------EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred -eCCceEEEEecCCcEEEEeCCC-------eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence 3345678888888899999999 999999998 543 223334556688999999 9999888887 99999
Q ss_pred EECCCC------eEEEEecccCC---------ceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 409 WEVEGG------EYMYSFRERIG---------EEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 409 WD~~tG------~~l~tL~gh~~---------~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
||+..+ +++.++.+|.. . |. +|+||+++|+++ .|++|+|||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP-VNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC-EEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred EEEcCCCcccccccceeeeccccccccccccee-EEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 999987 88899998865 6 77 678999999999 99999999975
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=7.9e-24 Score=212.01 Aligned_cols=265 Identities=10% Similarity=0.061 Sum_probs=192.6
Q ss_pred EEEEEecC--CEE-EEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeE-EEEeCCCCEEEEEee
Q 046773 147 CRCLTLSD--LYL-ACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQL-IFATLDGDIHVAVID 220 (453)
Q Consensus 147 v~~lafs~--~~L-aSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~L-asgS~D~tIkvWd~~ 220 (453)
+.+++|++ ++| ++++.|++|++||+.++++++++..++ .+.+++|+ ++.| ++++.|++|++||+.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---------~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---------SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---------SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC---------CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 68999986 455 788899999999999999999997543 46778776 5666 456678999999998
Q ss_pred cCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecccee
Q 046773 221 DVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVG 298 (453)
Q Consensus 221 ~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~ 298 (453)
+ + ...+..+ .. ...++|+|+|+.+ +++++.|++|++||+++++... .+..+ ..+.
T Consensus 105 ~-~~~~~~~~~~-~~----~~~~~~s~dg~~l--~~~~~~~~~v~~~d~~~~~~~~--------------~~~~~-~~~~ 161 (391)
T 1l0q_A 105 S-NTVAGTVKTG-KS----PLGLALSPDGKKL--YVTNNGDKTVSVINTVTKAVIN--------------TVSVG-RSPK 161 (391)
T ss_dssp T-TEEEEEEECS-SS----EEEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEE--------------EEECC-SSEE
T ss_pred C-CeEEEEEeCC-CC----cceEEECCCCCEE--EEEeCCCCEEEEEECCCCcEEE--------------EEecC-CCcc
Confidence 7 4 2222222 11 1258999999962 4688899999999999988431 22233 3467
Q ss_pred EEEEcCCce-E-EEE-cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe---CCCccccCcceEEEEEcCC
Q 046773 299 RVRVTSHES-A-VAC-TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE---NRELENQNRRLAIVRRVDT 372 (453)
Q Consensus 299 ~v~~s~~~~-~-vas-~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s---~dg~~~~~~~~i~Iw~~~t 372 (453)
.++|+|++. + +++ .+++|++||+++++++.... +.......+|+++++.+++++ .++ .+++||..+
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~-------~v~~~d~~~ 233 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFN-------TVSMIDTGT 233 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCC-------EEEEEETTT
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCC-------cEEEEECCC
Confidence 899998773 3 444 45789999999987665543 222333456777888888877 466 999999999
Q ss_pred CeeEEEEEecCCCeeEEEEeeCCCeEEEE-eC-CeEEEEECCCCeEEEEecccCCce----------------EEEEecC
Q 046773 373 FEEVCRFSLRADRNVNVMGCMNQGYALMC-VE-GVIRVWEVEGGEYMYSFRERIGEE----------------VIAFVGD 434 (453)
Q Consensus 373 g~~v~~l~~~~~~v~~~~~~~~~~~lls~-s~-~tIrlWD~~tG~~l~tL~gh~~~~----------------V~a~s~d 434 (453)
++.+..+..+. .+..+.+++++++++.+ +. ++|++||+++++++.++..|.... +..|+.+
T Consensus 234 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~ 312 (391)
T 1l0q_A 234 NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSN 312 (391)
T ss_dssp TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEES
T ss_pred CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccc
Confidence 99888887654 46788899999888544 44 999999999999999987765431 1123322
Q ss_pred C----------CEEEEE-eCCcEEEEecC
Q 046773 435 D----------RHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 435 ~----------~~lasg-~D~~IklWDl~ 452 (453)
. ..+++. .|.++++||++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 341 (391)
T 1l0q_A 313 ITSGYIFLSEPVQFTDLSKDATEWKWDFG 341 (391)
T ss_dssp CCSSEEETTCCEEEEECCBSCSEEEEECS
T ss_pred cccccccccceEEEEeCCCCceEEEEECC
Confidence 1 345555 79999999985
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-25 Score=246.23 Aligned_cols=241 Identities=13% Similarity=0.154 Sum_probs=184.6
Q ss_pred EEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC-C--cceEEeeecceecCceEEEEeCC--Cce
Q 046773 177 VRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV-A--NETRTAHFGSVMDDGVLIDFTGC--SRY 249 (453)
Q Consensus 177 ~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~-g--~~~~~~~~~~v~~~~~~v~Fs~d--g~~ 249 (453)
+.++.||.. .|.+++|+ ++.|++|+.|++|+|||+... + ..++.+|.+.|. .++|+|+ +++
T Consensus 2 ~~~l~gH~~--------~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~----~l~~s~~~~~~~ 69 (753)
T 3jro_A 2 VVIANAHNE--------LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW----RVDWAHPKFGTI 69 (753)
T ss_dssp ------CCC--------CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE----EEEECCTTSCSE
T ss_pred eeecccCcc--------eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE----EEEecCCCCCCE
Confidence 356777654 68888875 678999999999999999841 2 345556766554 4899988 775
Q ss_pred eeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC--c--eEEEEcCCcEEEEECCCCc
Q 046773 250 WVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH--E--SAVACTSSRVITFDLRNQG 325 (453)
Q Consensus 250 ~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~--~--~~vas~d~tIrlWDl~t~~ 325 (453)
|++|+.|++|+|||+.+++... ...+.+|...|.+++|+|+ + +++++.|++|++||++++.
T Consensus 70 ---l~s~s~Dg~I~vwd~~~~~~~~------------~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 70 ---LASCSYDGKVLIWKEENGRWSQ------------IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp ---EEEEETTSCEEEEEEETTEEEE------------EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred ---EEEEeCCCeEEEEECCCCcccc------------cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 8899999999999999986211 1346678899999999986 4 4566778999999999874
Q ss_pred eE--EEEeeccCCeEEEEEEe-------------cCCEEEEEeCCCccccCcceEEEEEcCCC----eeEEEEEecCCCe
Q 046773 326 MV--LGERGYGRGLYVTSVDV-------------NAEAYIVVENRELENQNRRLAIVRRVDTF----EEVCRFSLRADRN 386 (453)
Q Consensus 326 ~~--~~~~g~~~~~~v~~~~~-------------~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg----~~v~~l~~~~~~v 386 (453)
+. ....+|...+...+++| +++.+++++.|+ +|+|||..++ .++..+..|...+
T Consensus 135 ~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-------~I~iwd~~~~~~~~~~~~~~~~h~~~V 207 (753)
T 3jro_A 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-------LVKIWKYNSDAQTYVLESTLEGHSDWV 207 (753)
T ss_dssp CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS-------CEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC-------eEEEEeccCCcccceeeeeecCCCCcE
Confidence 32 23355655555555666 478899999999 9999999876 5566777888889
Q ss_pred eEEEEeeC---CCeEEEEeC-CeEEEEECCCCe-----EEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 387 VNVMGCMN---QGYALMCVE-GVIRVWEVEGGE-----YMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 387 ~~~~~~~~---~~~lls~s~-~tIrlWD~~tG~-----~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
..+.++|+ +.++++++. ++|+|||+.+++ .+....+|.+. |+ +|+||+++|+++ .|+.|+|||+.
T Consensus 208 ~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 208 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSC-CCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCc-eEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 99999999 778888776 999999999874 34444567777 76 788999999999 99999999975
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.8e-24 Score=209.37 Aligned_cols=252 Identities=11% Similarity=0.096 Sum_probs=166.2
Q ss_pred CCCCCCCeEEEEEEec----CCEEEEEeCCCcEEEEECCCC---------eEEEEecCCCCCccccccceEEEEEEc---
Q 046773 138 DVDNPDGLTCRCLTLS----DLYLACGFADGAVRLFDLTTR---------LHVRTFRPQHSDRLGQFSRAVSGIIIT--- 201 (453)
Q Consensus 138 gh~~~d~v~v~~lafs----~~~LaSGS~D~TIrlWD~~tg---------~~~~tl~gh~~~~~~~~s~~V~~i~f~--- 201 (453)
+|..+ |+|++|+ +++|++|+.|++|+|||+.++ +++.++.+|.. .|.+++|+
T Consensus 55 ~~~~~----v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~ 122 (351)
T 3f3f_A 55 AHDSS----IVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG--------SLYSVKFAPAH 122 (351)
T ss_dssp CCSSC----EEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSS--------CEEEEEECCGG
T ss_pred cCCCc----EEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCC--------ceeEEEEcCCC
Confidence 78754 8999996 469999999999999999998 67888887654 57888886
Q ss_pred -CCeEEEEeCCCCEEEEEeecCC-cceEEe-------------eecceecCceEEEEeCC---CceeeEEEEeeCCCeEE
Q 046773 202 -DSQLIFATLDGDIHVAVIDDVA-NETRTA-------------HFGSVMDDGVLIDFTGC---SRYWVGLYAGLAGRAFH 263 (453)
Q Consensus 202 -g~~LasgS~D~tIkvWd~~~~g-~~~~~~-------------~~~~v~~~~~~v~Fs~d---g~~~~~LaSgS~D~tIr 263 (453)
+..|++++.|++|++||+.+.. +..+.. |... ...++|+|+ ++. |++++.|+.+.
T Consensus 123 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~---l~~~~~~~~~~ 195 (351)
T 3f3f_A 123 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS----DFCLSWCPSRFSPEK---LAVSALEQAII 195 (351)
T ss_dssp GCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC----CEEEEECCCSSSCCE---EEEEETTEEEE
T ss_pred CCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccc----eeEEEeccCCCCCcE---EEEecCCCcEE
Confidence 5689999999999999997622 222221 1111 225899997 664 88999999998
Q ss_pred EeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc------eEEEEcCCcEEEEECCCCceEEEEeeccCCe
Q 046773 264 IWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE------SAVACTSSRVITFDLRNQGMVLGERGYGRGL 337 (453)
Q Consensus 264 vWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~------~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~ 337 (453)
+|+..+++... ...+.+|..+|.+++|+|++ +++++.|++|++||++++.+......+....
T Consensus 196 ~~~~~~~~~~~------------~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 263 (351)
T 3f3f_A 196 YQRGKDGKLHV------------AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNS 263 (351)
T ss_dssp EEECTTSCEEE------------EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------
T ss_pred EEccCCCceee------------eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccce
Confidence 88888776311 13567889999999999985 4555678999999999875543321111111
Q ss_pred EEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCe-
Q 046773 338 YVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGE- 415 (453)
Q Consensus 338 ~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~- 415 (453)
......+.......+..++ .....+.+|+..+.+++..+..|...+..+.+++++.++++++. ++|+|||+.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 264 NMFDNSADVDMDAQGRSDS---NTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp ------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred eccCCCccccccccccccc---ccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 1111222222222222211 11114556666666778888888888999999999999998887 999999999984
Q ss_pred --EEEEeccc
Q 046773 416 --YMYSFRER 423 (453)
Q Consensus 416 --~l~tL~gh 423 (453)
|+..+..|
T Consensus 341 ~~~~~~~~~~ 350 (351)
T 3f3f_A 341 FKCMSVITAQ 350 (351)
T ss_dssp EEEEEEEC--
T ss_pred hhheeehccc
Confidence 45555443
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.8e-25 Score=235.05 Aligned_cols=260 Identities=6% Similarity=-0.044 Sum_probs=177.6
Q ss_pred CCCCCCCCeEEEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCCccccccceEEEEEEc--CCeEEEEeCCCC
Q 046773 137 SDVDNPDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFR-PQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGD 213 (453)
Q Consensus 137 ~gh~~~d~v~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~-gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~t 213 (453)
+||. .. |++++|+|+- ++++|++.++++...+. +| . ..|.+++|+ |..||++|.|++
T Consensus 49 ~gh~--~~--v~~V~FsPdg--------~~~~~~~~~~~~~~~~~~~~-~-------~~V~~vawSPdG~~LAs~s~dg~ 108 (588)
T 2j04_A 49 NCNS--KN--LFHVKEFPLE--------FENKLDFELAQQNGLLNSQP-V-------CYPRVCKPSPIDDWMAVLSNNGN 108 (588)
T ss_dssp SSBG--GG--TEEEEEECCC--------CCCTTTTSCCCSSCSSTTSC-S-------CCEEEEEECSSSSCEEEEETTSC
T ss_pred cCCC--cc--EEEEEECCCC--------CcceEEEEeCCCceEeecCC-C-------CcEEEEEECCCCCEEEEEeCCCc
Confidence 3787 33 7899998853 55566666666544554 33 2 267888875 678999999999
Q ss_pred EEEEEeecCCcceEEeeecceecC-ceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeee--
Q 046773 214 IHVAVIDDVANETRTAHFGSVMDD-GVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRML-- 290 (453)
Q Consensus 214 IkvWd~~~~g~~~~~~~~~~v~~~-~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l-- 290 (453)
|+|||.++ -+..+. |...+... ...|+|||||++ ||+|+.|++|+|||+.++... .+. +...+++
T Consensus 109 V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~---LAsgs~DGtVkIWd~~~~~l~------~~~-~i~l~ti~~ 176 (588)
T 2j04_A 109 VSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESS---IVVGNEDGELQFFSIRKNSEN------TPE-FYFESSIRL 176 (588)
T ss_dssp EEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSC---EEEEETTSEEEEEECCCCTTT------CCC-CEEEEEEEC
T ss_pred EEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCE---EEEEcCCCEEEEEECCCCccc------ccc-ceeeeeeec
Confidence 99999543 223333 43321111 125999999997 899999999999999987420 000 0001333
Q ss_pred --eeeccceeEEEEcCCceEEEEcCCcEEEEECCCCceE---EEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcce
Q 046773 291 --TEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMV---LGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRL 364 (453)
Q Consensus 291 --~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~---~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~ 364 (453)
.+|.++|.+|+|+|+++++++.|++||+||+.++.+. .++ .+|. ..|.+++++++.+++++ ++ +
T Consensus 177 ~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~--~~V~svaFsg~~LASa~-~~-------t 246 (588)
T 2j04_A 177 SDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASR--RKITDLKIVDYKVVLTC-PG-------Y 246 (588)
T ss_dssp SCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCS--SCCCCEEEETTEEEEEC-SS-------E
T ss_pred ccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeeccccc--CcEEEEEEECCEEEEEe-CC-------e
Confidence 5677899999999999666678899999999987632 233 2443 34566666678888886 68 9
Q ss_pred EEEEEcCCCeeEEEEEecCCCeeEEEE--eeCCCeEEEEeC-CeEEEEECCC-----------------------CeEEE
Q 046773 365 AIVRRVDTFEEVCRFSLRADRNVNVMG--CMNQGYALMCVE-GVIRVWEVEG-----------------------GEYMY 418 (453)
Q Consensus 365 i~Iw~~~tg~~v~~l~~~~~~v~~~~~--~~~~~~lls~s~-~tIrlWD~~t-----------------------G~~l~ 418 (453)
|++|+..+++.......|.+.+..+.+ ++++..++++.. |+ |||.... |..+.
T Consensus 247 IkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~ 325 (588)
T 2j04_A 247 VHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFN 325 (588)
T ss_dssp EEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSS
T ss_pred EEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCcee
Confidence 999999988764333368888999999 888767666664 88 8887631 22233
Q ss_pred EecccCCceEE--EEecCCCEEEEE
Q 046773 419 SFRERIGEEVI--AFVGDDRHVAAS 441 (453)
Q Consensus 419 tL~gh~~~~V~--a~s~d~~~lasg 441 (453)
.+++ ... |. +|+|||+.||++
T Consensus 326 ~~~~-~~~-I~~va~SPdG~~lA~~ 348 (588)
T 2j04_A 326 NYET-TLV-IHGISLSPDGYSIAIV 348 (588)
T ss_dssp SSCC-EEE-EEEEEECTTSSEEEEE
T ss_pred eecc-ceE-EEEEEECCCCCEEEEE
Confidence 3332 223 66 788999999987
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.3e-23 Score=214.20 Aligned_cols=258 Identities=11% Similarity=0.047 Sum_probs=185.8
Q ss_pred CEEEEEe----CCC----cEEEEEC--CCCeEE--EEecCCCCCccccccceEEEEEEc----------------CCeEE
Q 046773 155 LYLACGF----ADG----AVRLFDL--TTRLHV--RTFRPQHSDRLGQFSRAVSGIIIT----------------DSQLI 206 (453)
Q Consensus 155 ~~LaSGS----~D~----TIrlWD~--~tg~~~--~tl~gh~~~~~~~~s~~V~~i~f~----------------g~~La 206 (453)
+++|+|+ .|+ +|||||+ .+++++ .++.+|... ++.+++. +.+|+
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~g~~~~~~~~l~ 147 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQW--------LRYAGHTASDEVFEKLTGIKGAFRTRIA 147 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGG--------HHHHHHHHHHHHHHHHHSSCCCTTCEEE
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhH--------HHHHHHHHHHHHHHHHcCCCCcCCCEEE
Confidence 4677776 356 9999999 999988 558876432 2222221 56788
Q ss_pred EEeCC------CCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCC---eEEEeeCCCCcEEeccc
Q 046773 207 FATLD------GDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGR---AFHIWDRQAEEVFVGGD 277 (453)
Q Consensus 207 sgS~D------~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~---tIrvWD~~tg~~~~g~~ 277 (453)
+++.+ ++|++||++......+..|...+. .++|+|||++ |++++.|+ +|++||+++++..
T Consensus 148 ~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~----~~~~Spdg~~---la~~s~~~~~~~i~~~d~~tg~~~---- 216 (415)
T 2hqs_A 148 YVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLM----SPAWSPDGSK---LAYVTFESGRSALVIQTLANGAVR---- 216 (415)
T ss_dssp EEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEE----EEEECTTSSE---EEEEECTTSSCEEEEEETTTCCEE----
T ss_pred EEEecCCCCccceEEEEcCCCCCCEEEeCCCCcce----eeEEcCCCCE---EEEEEecCCCcEEEEEECCCCcEE----
Confidence 77765 799999997622566666765543 4899999997 77888875 9999999998842
Q ss_pred ccCCcceeeeeeeeeeccceeEEEEcCCceEE--EE-cCC--cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEE
Q 046773 278 LTDHNTVMGWRMLTEFTEFVGRVRVTSHESAV--AC-TSS--RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVV 352 (453)
Q Consensus 278 l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~v--as-~d~--tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~ 352 (453)
.+..|...+.+++|+|++..+ ++ .++ .|++||++++++ .++..|.......+|+|+|+.++.+
T Consensus 217 -----------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 217 -----------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp -----------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEE
T ss_pred -----------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEE
Confidence 244566788999999988533 33 343 599999999765 4444555555556788889888888
Q ss_pred eC-CCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC----CeEEEEECCCCeEEEEecccCCce
Q 046773 353 EN-RELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE----GVIRVWEVEGGEYMYSFRERIGEE 427 (453)
Q Consensus 353 s~-dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~----~tIrlWD~~tG~~l~tL~gh~~~~ 427 (453)
+. ++ ...+.+|+.++++. ..+..+...+..+.++|++++++.++. .+|++||++++++ ..|..|. .
T Consensus 285 s~~~g-----~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~- 355 (415)
T 2hqs_A 285 SDQAG-----RPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-L- 355 (415)
T ss_dssp ECTTS-----SCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-S-
T ss_pred ECCCC-----CcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-C-
Confidence 75 34 11455567777653 445556666788899999999887653 5999999999987 4566664 3
Q ss_pred EE--EEecCCCEEEEE-eCC---cEEEEecC
Q 046773 428 VI--AFVGDDRHVAAS-CGT---NIHLWDFG 452 (453)
Q Consensus 428 V~--a~s~d~~~lasg-~D~---~IklWDl~ 452 (453)
+. +|+|||++|+++ .|+ .|++||+.
T Consensus 356 ~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 356 DETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp CEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred cCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 44 789999999887 665 79999874
No 124
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.6e-22 Score=206.85 Aligned_cols=239 Identities=12% Similarity=0.113 Sum_probs=178.1
Q ss_pred CCCCCCCeEEEEEEecC--CEE-EEEeCCCcEEEEECC--CCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeC
Q 046773 138 DVDNPDGLTCRCLTLSD--LYL-ACGFADGAVRLFDLT--TRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATL 210 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~~L-aSGS~D~TIrlWD~~--tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~ 210 (453)
+|.++ |+|++|++ ++| |+|+.|++|+|||+. ++++++++..|.. ...|.+++|+ +..|++|+.
T Consensus 100 ~~~~~----v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 100 PIYSY----IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF------SKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp CCCCC----EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC------SSCEEEEEECTTSSEEEEEET
T ss_pred ccCCc----eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC------CCCceEEEEcCCCCEEEEEeC
Confidence 56633 88999986 565 999999999999999 9999999874321 1257888885 678999999
Q ss_pred CCCEEEEEeecCC-cc----eEEeeecceecCceEEEEeCC---CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCc
Q 046773 211 DGDIHVAVIDDVA-NE----TRTAHFGSVMDDGVLIDFTGC---SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 211 D~tIkvWd~~~~g-~~----~~~~~~~~v~~~~~~v~Fs~d---g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
|++|++|++.+.. .. .+.+|...+. .|+|+|+ +++ |++|+.|++|+|||+++++.+.
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~sp~~~~~~~---l~s~~~d~~i~vwd~~~~~~~~-------- 234 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLT----DVHLIKDSDGHQF---IITSDRDEHIKISHYPQCFIVD-------- 234 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEE----EEEEEECTTSCEE---EEEEETTSCEEEEEESCTTCEE--------
T ss_pred CCcEEEEecCCcccccccceeeecccCceE----EEEEcCCCCCCcE---EEEEcCCCcEEEEECCCCceee--------
Confidence 9999999987622 22 5666766554 4899999 886 8899999999999999887431
Q ss_pred ceeeeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEeec-------------------------cC
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGERGY-------------------------GR 335 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~g~-------------------------~~ 335 (453)
..+.+|..+|.+++|+ ++ +++++.|++|+|||+++++++.....+ ..
T Consensus 235 -----~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (450)
T 2vdu_B 235 -----KWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEF 308 (450)
T ss_dssp -----EECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCC
T ss_pred -----eeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceE
Confidence 1245788999999998 54 556677899999999999877665321 11
Q ss_pred CeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEc--CCC---eeEEEEEecCCCeeEEEEeeCCCeEEEEeC------
Q 046773 336 GLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRV--DTF---EEVCRFSLRADRNVNVMGCMNQGYALMCVE------ 403 (453)
Q Consensus 336 ~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~--~tg---~~v~~l~~~~~~v~~~~~~~~~~~lls~s~------ 403 (453)
.+.-.++.++++.+++++ .++ .|+||++ .++ +.+..+..+ ..+..+.++++ +.+++++.
T Consensus 309 ~v~~i~~~~~~~~l~~~~~~d~-------~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~-~~~v~~~~~~~~~~ 379 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVEATK-------CIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND-EFQVTLDNKESSGV 379 (450)
T ss_dssp CEEEEEECSSSSEEEEEETTCS-------EEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT-EEEEEECCTTCCSS
T ss_pred EEEEEEEeCCCCEEEEEECCCC-------eEEEEEeccCCCCceeeccEeccC-CceEEEEecCC-cEEEEEecccCCCC
Confidence 222345567788888888 778 9999999 666 677777776 66888888884 45554432
Q ss_pred --CeEEEEECC--CCeE
Q 046773 404 --GVIRVWEVE--GGEY 416 (453)
Q Consensus 404 --~tIrlWD~~--tG~~ 416 (453)
+.|+||.+. +++.
T Consensus 380 ~~~~i~v~~~~~~~~~~ 396 (450)
T 2vdu_B 380 QKNFAKFIEYNLNENSF 396 (450)
T ss_dssp CCCSEEEEEEETTTTEE
T ss_pred CCcceEEEEEEcCCCeE
Confidence 348888654 4554
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.8e-23 Score=206.31 Aligned_cols=228 Identities=11% Similarity=-0.010 Sum_probs=151.7
Q ss_pred EEEEEecCCEEEEEeCCCcEEEEECC---------CCeEEEEecCCCCCccccccceEEEEEEc----CCeEEEEeCCCC
Q 046773 147 CRCLTLSDLYLACGFADGAVRLFDLT---------TRLHVRTFRPQHSDRLGQFSRAVSGIIIT----DSQLIFATLDGD 213 (453)
Q Consensus 147 v~~lafs~~~LaSGS~D~TIrlWD~~---------tg~~~~tl~gh~~~~~~~~s~~V~~i~f~----g~~LasgS~D~t 213 (453)
|.+++|.+. |+|||.|++|++|+.. ++++++.+.-.|. ..|.+++|+ ++.+++||.|++
T Consensus 79 v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~s~s~dg~ 150 (343)
T 3lrv_A 79 PRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSA-------NEIIYMYGHNEVNTEYFIWADNRGT 150 (343)
T ss_dssp CCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCS-------SCEEEEECCC---CCEEEEEETTCC
T ss_pred ceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCC-------CCEEEEEcCCCCCCCEEEEEeCCCc
Confidence 345666777 9999999999999655 7776666652221 257778764 568999999999
Q ss_pred EEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeee-
Q 046773 214 IHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTE- 292 (453)
Q Consensus 214 IkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~- 292 (453)
|++||+++ + ..+..........-..++|+|||++ |++|+.|++|+|||+++++... ..+..
T Consensus 151 i~~wd~~~-~-~~~~~~~~~~~~~i~~~~~~pdg~~---lasg~~dg~i~iwd~~~~~~~~-------------~~~~~~ 212 (343)
T 3lrv_A 151 IGFQSYED-D-SQYIVHSAKSDVEYSSGVLHKDSLL---LALYSPDGILDVYNLSSPDQAS-------------SRFPVD 212 (343)
T ss_dssp EEEEESSS-S-CEEEEECCCSSCCCCEEEECTTSCE---EEEECTTSCEEEEESSCTTSCC-------------EECCCC
T ss_pred EEEEECCC-C-cEEEEEecCCCCceEEEEECCCCCE---EEEEcCCCEEEEEECCCCCCCc-------------cEEecc
Confidence 99999987 4 2222211110011125899999996 8899999999999999987320 23455
Q ss_pred eccceeEEEEcCCceEE-EEcCCcEEEEECCCCceEEEEee---ccCCe--EEEEEEecCCEEEEEeC-CCccccCcceE
Q 046773 293 FTEFVGRVRVTSHESAV-ACTSSRVITFDLRNQGMVLGERG---YGRGL--YVTSVDVNAEAYIVVEN-RELENQNRRLA 365 (453)
Q Consensus 293 h~~~v~~v~~s~~~~~v-as~d~tIrlWDl~t~~~~~~~~g---~~~~~--~v~~~~~~g~~l~s~s~-dg~~~~~~~~i 365 (453)
|.++|.+|+|+|++..+ ++++++|+|||+++++++..... |.... ...+|++++..+++++. ++ .+
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~-------~i 285 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN-------SL 285 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT-------EE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC-------cE
Confidence 88999999999987433 33466999999999876543211 11111 24678888999999888 88 99
Q ss_pred EEEEcCCCeeEEEEEecCCCeeEEEEee---CCCeEEEEeC-CeEEEEEC
Q 046773 366 IVRRVDTFEEVCRFSLRADRNVNVMGCM---NQGYALMCVE-GVIRVWEV 411 (453)
Q Consensus 366 ~Iw~~~tg~~v~~l~~~~~~v~~~~~~~---~~~~lls~s~-~tIrlWD~ 411 (453)
+||++++....... ..+..+.+.+ +...+++++. ++++++-.
T Consensus 286 ~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 286 TIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 99999765332221 1122233333 4455555554 77777643
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=4.3e-22 Score=212.47 Aligned_cols=270 Identities=14% Similarity=0.118 Sum_probs=186.5
Q ss_pred ec--CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCCCEEEEEe--ecCC--
Q 046773 152 LS--DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGDIHVAVI--DDVA-- 223 (453)
Q Consensus 152 fs--~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~tIkvWd~--~~~g-- 223 (453)
|+ +.++++++.|++|++||..+++++.++..++. +.+++| +++.|++++.|++|++||+ .+ +
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~---------~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-~~~ 214 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA---------VHISRMSASGRYLLVIGRDARIDMIDLWAKE-PTK 214 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT---------EEEEEECTTSCEEEEEETTSEEEEEETTSSS-CEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc---------cceEEECCCCCEEEEECCCCeEEEEECcCCC-CcE
Confidence 55 46899999999999999999999999984332 334555 5789999999999999999 55 4
Q ss_pred cceEEeeecceecCceEEEEeC----CCceeeEEEEee-CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc-ce
Q 046773 224 NETRTAHFGSVMDDGVLIDFTG----CSRYWVGLYAGL-AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE-FV 297 (453)
Q Consensus 224 ~~~~~~~~~~v~~~~~~v~Fs~----dg~~~~~LaSgS-~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~-~v 297 (453)
+.++.. +. +...|+|+| ||++ |++++ .|++|+|||..+++.+.--.+.+ ..+ ....-|.+ .+
T Consensus 215 ~~~i~~--g~---~p~~va~sp~~~~dg~~---l~v~~~~~~~v~v~D~~t~~~~~~i~~~g-~~~---~~~~~~~~~~v 282 (543)
T 1nir_A 215 VAEIKI--GI---EARSVESSKFKGYEDRY---TIAGAYWPPQFAIMDGETLEPKQIVSTRG-MTV---DTQTYHPEPRV 282 (543)
T ss_dssp EEEEEC--CS---EEEEEEECCSTTCTTTE---EEEEEEESSEEEEEETTTCCEEEEEECCE-ECS---SSCCEESCCCE
T ss_pred EEEEec--CC---CcceEEeCCCcCCCCCE---EEEEEccCCeEEEEeccccccceeecccC-ccc---CccccccCCce
Confidence 222221 11 123589999 9997 66766 58999999999988432000000 000 00001323 67
Q ss_pred eEEEEcCCc-eE-EEE-cCCcEEEEECCCCceEEE-EeeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCC
Q 046773 298 GRVRVTSHE-SA-VAC-TSSRVITFDLRNQGMVLG-ERGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDT 372 (453)
Q Consensus 298 ~~v~~s~~~-~~-vas-~d~tIrlWDl~t~~~~~~-~~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~t 372 (453)
.++.+++++ .+ ++. .+++|.+||+.+.+++.. ...++....-.+|+|+++.+++++ .++ +|+|||..+
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~-------~v~v~D~~t 355 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSN-------KVAVIDSKD 355 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGT-------EEEEEETTT
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCC-------eEEEEECCC
Confidence 889999754 33 333 357999999998765442 222222223357888888766554 466 999999999
Q ss_pred CeeEEEEEe----cCCCeeEEEEeeCCCeEEE-Ee-C-CeEEEEECCC-------CeEEEEecccCCceEE--EEecCCC
Q 046773 373 FEEVCRFSL----RADRNVNVMGCMNQGYALM-CV-E-GVIRVWEVEG-------GEYMYSFRERIGEEVI--AFVGDDR 436 (453)
Q Consensus 373 g~~v~~l~~----~~~~v~~~~~~~~~~~lls-~s-~-~tIrlWD~~t-------G~~l~tL~gh~~~~V~--a~s~d~~ 436 (453)
++++..+.. |+..... .++|+++.+.+ ++ + ++|+|||+.+ ++++++|.+|.+. +. +++||++
T Consensus 356 g~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-~~~v~~~pdg~ 433 (543)
T 1nir_A 356 RRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKSS 433 (543)
T ss_dssp TEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCC
T ss_pred CeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-ceEEEcCCCCC
Confidence 999888864 4432222 24566565554 43 3 8999999999 8999999999766 43 7889999
Q ss_pred EEEEEe--------CCcEEEEecC
Q 046773 437 HVAASC--------GTNIHLWDFG 452 (453)
Q Consensus 437 ~lasg~--------D~~IklWDl~ 452 (453)
+|.++. |++|.|||+.
T Consensus 434 ~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 434 HLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp EEEECCTTCSSHHHHTCEEEEETT
T ss_pred cEEEecCCCCCcccCceEEEEECC
Confidence 998763 7799999975
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.9e-21 Score=207.41 Aligned_cols=272 Identities=10% Similarity=0.013 Sum_probs=195.3
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEEC--CCCeEEEEecCCCCCccccccceEEEEEE------cCCeEEEEe-CCCCEE
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDL--TTRLHVRTFRPQHSDRLGQFSRAVSGIII------TDSQLIFAT-LDGDIH 215 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~--~tg~~~~tl~gh~~~~~~~~s~~V~~i~f------~g~~LasgS-~D~tIk 215 (453)
+.+++||+ ++|++++.|++|++||+ .|++++.++..+ . .+..++| +|+.|++++ .|++|.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~--------~p~~va~sp~~~~dg~~l~v~~~~~~~v~ 251 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-I--------EARSVESSKFKGYEDRYTIAGAYWPPQFA 251 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-S--------EEEEEEECCSTTCTTTEEEEEEEESSEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-C--------CcceEEeCCCcCCCCCEEEEEEccCCeEE
Confidence 56888876 69999999999999999 999999999742 2 3455666 467888887 589999
Q ss_pred EEEeecCC--cceEEeeecce-----ecC--ceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceee
Q 046773 216 VAVIDDVA--NETRTAHFGSV-----MDD--GVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMG 286 (453)
Q Consensus 216 vWd~~~~g--~~~~~~~~~~v-----~~~--~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~ 286 (453)
|||..+ + +.++..+...+ ..+ ...+.|+|+++. .+++.+.+++|.+||+.+++.+.
T Consensus 252 v~D~~t-~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~--~~vs~~~~g~i~vvd~~~~~~l~------------ 316 (543)
T 1nir_A 252 IMDGET-LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE--FIVNVKETGKVLLVNYKDIDNLT------------ 316 (543)
T ss_dssp EEETTT-CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE--EEEEETTTTEEEEEECTTSSSCE------------
T ss_pred EEeccc-cccceeecccCcccCccccccCCceEEEEECCCCCE--EEEEECCCCeEEEEEecCCCcce------------
Confidence 999877 4 23333221100 011 124889999876 36788899999999998876211
Q ss_pred eeeeeeeccceeEEEEcCCce--EEEEc-CCcEEEEECCCCceEEEEe-e---ccCCeEEEEEEecC-CEEEEEe-CCCc
Q 046773 287 WRMLTEFTEFVGRVRVTSHES--AVACT-SSRVITFDLRNQGMVLGER-G---YGRGLYVTSVDVNA-EAYIVVE-NREL 357 (453)
Q Consensus 287 w~~l~~h~~~v~~v~~s~~~~--~vas~-d~tIrlWDl~t~~~~~~~~-g---~~~~~~v~~~~~~g-~~l~s~s-~dg~ 357 (453)
.+...+...+..+.|+|++. ++++. +++|++||+++++++.+.. + |..... .-+++++ ..+++++ .++
T Consensus 317 -~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~-~~~~p~~g~~~~s~~~~d~- 393 (543)
T 1nir_A 317 -VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA-NFVHPKYGPVWSTSHLGDG- 393 (543)
T ss_dssp -EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE-EEEETTTEEEEEEEBSSSS-
T ss_pred -eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc-ccCCCCCccEEEeccCCCc-
Confidence 00112345567789998874 44443 6899999999998776552 2 322221 2245663 3455554 456
Q ss_pred cccCcceEEEEEcCC-------CeeEEEEEecCCCeeEEEEeeCCCeEEEEe--------CCeEEEEECCCCeEE-EEe-
Q 046773 358 ENQNRRLAIVRRVDT-------FEEVCRFSLRADRNVNVMGCMNQGYALMCV--------EGVIRVWEVEGGEYM-YSF- 420 (453)
Q Consensus 358 ~~~~~~~i~Iw~~~t-------g~~v~~l~~~~~~v~~~~~~~~~~~lls~s--------~~tIrlWD~~tG~~l-~tL- 420 (453)
+|+||+.++ .++++++..++..+..+.++|+++++.+++ +++|+|||+++++++ ..|
T Consensus 394 ------~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~ 467 (543)
T 1nir_A 394 ------SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP 467 (543)
T ss_dssp ------EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC
T ss_pred ------eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEee
Confidence 999999998 889999999888888899999999998876 369999999999988 454
Q ss_pred -------cccCCceEE--EEecCCCEEEEE-e-----CCcEEEEecC
Q 046773 421 -------RERIGEEVI--AFVGDDRHVAAS-C-----GTNIHLWDFG 452 (453)
Q Consensus 421 -------~gh~~~~V~--a~s~d~~~lasg-~-----D~~IklWDl~ 452 (453)
..+... |+ +|+|||+.|..+ . |++|.|||..
T Consensus 468 v~~~~~~~~~~~~-~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 468 IAEWADLGEGAKR-VVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp HHHHHCCCSSCCE-EEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred chhhcccCCCCCc-eEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 344444 65 789999988644 2 7999999964
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.90 E-value=5.6e-22 Score=201.22 Aligned_cols=258 Identities=10% Similarity=0.047 Sum_probs=179.7
Q ss_pred EEeCCCcEEEEEC--CCC--eEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecCCcceEE----
Q 046773 159 CGFADGAVRLFDL--TTR--LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDVANETRT---- 228 (453)
Q Consensus 159 SGS~D~TIrlWD~--~tg--~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g~~~~~---- 228 (453)
+++.|++++||.+ +++ +.++++..+.. +.+++|+ +..+++++.|++|++||+.+ + ...+
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~---------~~~~~~s~~~~~~~~~~~~~~i~~~d~~~-g-~~~~~~~~ 162 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFKTGFQ---------PKSVRFIDNTRLAIPLLEDEGMDVLDINS-G-QTVRLSPP 162 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEECSSC---------BCCCEESSSSEEEEEBTTSSSEEEEETTT-C-CEEEECCC
T ss_pred cccCCCceEEEEECCCCCcceEEEEEcCCCC---------ceEEEEeCCCeEEEEeCCCCeEEEEECCC-C-eEeeecCc
Confidence 4555664555554 446 66777764321 2346665 44567778899999999987 4 1222
Q ss_pred ----eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC
Q 046773 229 ----AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS 304 (453)
Q Consensus 229 ----~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~ 304 (453)
.|.+.+. .++|+|+|+. +++++.|++|++||+++++.. .++..|...+.+++|+|
T Consensus 163 ~~~~~~~~~v~----~~~~~~~~~~---~~s~~~d~~v~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~~ 221 (433)
T 3bws_A 163 EKYKKKLGFVE----TISIPEHNEL---WVSQMQANAVHVFDLKTLAYK--------------ATVDLTGKWSKILLYDP 221 (433)
T ss_dssp HHHHTTCCEEE----EEEEGGGTEE---EEEEGGGTEEEEEETTTCCEE--------------EEEECSSSSEEEEEEET
T ss_pred ccccccCCcee----EEEEcCCCEE---EEEECCCCEEEEEECCCceEE--------------EEEcCCCCCeeEEEEcC
Confidence 2333332 4889999985 789999999999999998743 23456777899999998
Q ss_pred Cc--eEEEE-cCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCcccc-CcceEEEEEcCCCeeEEEEE
Q 046773 305 HE--SAVAC-TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQ-NRRLAIVRRVDTFEEVCRFS 380 (453)
Q Consensus 305 ~~--~~vas-~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~-~~~~i~Iw~~~tg~~v~~l~ 380 (453)
++ +++++ .+++|++||+++++++.....+. .....+++++++.+++++.+..... .++.+++||..+++.+..+.
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~ 300 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG 300 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc
Confidence 76 33455 46899999999987655543322 2334556777888888774210000 12399999999998776653
Q ss_pred ecCCCeeEEEEeeCCCeEEEE-eC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-e-------------
Q 046773 381 LRADRNVNVMGCMNQGYALMC-VE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-C------------- 442 (453)
Q Consensus 381 ~~~~~v~~~~~~~~~~~lls~-s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~------------- 442 (453)
++..+..+.+++++++++.+ +. ++|++||+.+++++..+. +... +. +|+||+++|+++ .
T Consensus 301 -~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 301 -PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDK-PNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp -EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSS-EEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred -CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCC-CCeEEEcCCCCEEEEEecCCCcccccccccc
Confidence 33457788999998877655 44 999999999999998886 4455 55 778999988776 4
Q ss_pred --CCcEEEEecC
Q 046773 443 --GTNIHLWDFG 452 (453)
Q Consensus 443 --D~~IklWDl~ 452 (453)
|+.|++||+.
T Consensus 378 ~~dg~v~~~d~~ 389 (433)
T 3bws_A 378 LVLGKVYVIDTT 389 (433)
T ss_dssp SSCCEEEEEETT
T ss_pred ccceEEEEEECC
Confidence 5699999974
No 129
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.87 E-value=1.2e-20 Score=193.61 Aligned_cols=197 Identities=17% Similarity=0.191 Sum_probs=149.4
Q ss_pred CCCCCCCeEEEEEEecC--C-EEEEEeCCCcEEEEECCCCeE-------EEEecCCCCCccccccceEEEEEEc---CCe
Q 046773 138 DVDNPDGLTCRCLTLSD--L-YLACGFADGAVRLFDLTTRLH-------VRTFRPQHSDRLGQFSRAVSGIIIT---DSQ 204 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~--~-~LaSGS~D~TIrlWD~~tg~~-------~~tl~gh~~~~~~~~s~~V~~i~f~---g~~ 204 (453)
+|..+ |++++|++ . +|++|+.|++|+|||+.++.. .+.+.+|.. .|.+++|+ +..
T Consensus 179 ~h~~~----v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~--------~v~~v~~~p~~~~~ 246 (430)
T 2xyi_A 179 GHQKE----GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA--------VVEDVAWHLLHESL 246 (430)
T ss_dssp CCSSC----CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS--------CEEEEEECSSCTTE
T ss_pred CCCCC----eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC--------CEeeeEEeCCCCCE
Confidence 78743 78999986 3 999999999999999998533 456666543 58889885 467
Q ss_pred EEEEeCCCCEEEEEeecCC----cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccC
Q 046773 205 LIFATLDGDIHVAVIDDVA----NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTD 280 (453)
Q Consensus 205 LasgS~D~tIkvWd~~~~g----~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~ 280 (453)
+++++.|++|++||+.+.. ...+..|...+. .++|+|+++. .|++|+.|++|+|||+++....
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~----~i~~~p~~~~--~l~tg~~dg~v~vwd~~~~~~~------- 313 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN----CLSFNPYSEF--ILATGSADKTVALWDLRNLKLK------- 313 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE----EEEECSSCTT--EEEEEETTSEEEEEETTCTTSC-------
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE----EEEeCCCCCC--EEEEEeCCCeEEEEeCCCCCCC-------
Confidence 9999999999999998631 334445655443 5899999985 3789999999999999984310
Q ss_pred CcceeeeeeeeeeccceeEEEEcCCc---eEEEEcCCcEEEEECCCC--------------ceEEEEeeccCCeEEEEEE
Q 046773 281 HNTVMGWRMLTEFTEFVGRVRVTSHE---SAVACTSSRVITFDLRNQ--------------GMVLGERGYGRGLYVTSVD 343 (453)
Q Consensus 281 ~~~v~~w~~l~~h~~~v~~v~~s~~~---~~vas~d~tIrlWDl~t~--------------~~~~~~~g~~~~~~v~~~~ 343 (453)
.+++.+|...|.+++|+|++ +++++.|++|+|||+.+. +++....+|...+...+++
T Consensus 314 ------~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 387 (430)
T 2xyi_A 314 ------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 387 (430)
T ss_dssp ------SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEEC
T ss_pred ------eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEEC
Confidence 13466788999999999876 455567899999999872 3444445666555555566
Q ss_pred ecCC-EEEEEeCCCccccCcceEEEEEcCC
Q 046773 344 VNAE-AYIVVENRELENQNRRLAIVRRVDT 372 (453)
Q Consensus 344 ~~g~-~l~s~s~dg~~~~~~~~i~Iw~~~t 372 (453)
+++. .+++++.|+ .++||+++.
T Consensus 388 p~~~~~l~s~s~dg-------~i~iw~~~~ 410 (430)
T 2xyi_A 388 PNEPWIICSVSEDN-------IMQVWQMAE 410 (430)
T ss_dssp SSSTTEEEEEETTS-------EEEEEEECH
T ss_pred CCCCCEEEEEECCC-------CEEEeEccc
Confidence 7777 789999999 999999875
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=3.2e-19 Score=174.36 Aligned_cols=259 Identities=8% Similarity=0.030 Sum_probs=176.5
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeC-CCCEEEEEeecCCcc-eEEee
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATL-DGDIHVAVIDDVANE-TRTAH 230 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~-D~tIkvWd~~~~g~~-~~~~~ 230 (453)
..+++.+.|++|++||+++++.++++..+.. .+ +++|+ ++.|+.++. +++|.+||..+ +.. .....
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~--------~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~ 80 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEILNQITLGYD--------FV-DTAITSDCSNVVVTSDFCQTLVQIETQL-EPPKVVAIQ 80 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCCC--------EE-EEEECSSSCEEEEEESTTCEEEEEECSS-SSCEEEEEE
T ss_pred EEEEEecCCCeEEEEeCcccceeeeEEccCC--------cc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-CceeEEecc
Confidence 3588999999999999999999888864322 23 56664 666666655 88999999987 421 22111
Q ss_pred ecceecCceE-EEEeCCCceeeEEEEeeCC-C--eEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc
Q 046773 231 FGSVMDDGVL-IDFTGCSRYWVGLYAGLAG-R--AFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE 306 (453)
Q Consensus 231 ~~~v~~~~~~-v~Fs~dg~~~~~LaSgS~D-~--tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~ 306 (453)
.+ ..... ++|+|||++ |+++..+ + +|++||+++++... .+..+ .....++|+|++
T Consensus 81 ~~---~~~~~~~~~s~dg~~---l~~~~~~~~~~~i~v~d~~~~~~~~--------------~~~~~-~~~~~~~~spdg 139 (331)
T 3u4y_A 81 EG---QSSMADVDITPDDQF---AVTVTGLNHPFNMQSYSFLKNKFIS--------------TIPIP-YDAVGIAISPNG 139 (331)
T ss_dssp EC---SSCCCCEEECTTSSE---EEECCCSSSSCEEEEEETTTTEEEE--------------EEECC-TTEEEEEECTTS
T ss_pred cC---CCCccceEECCCCCE---EEEecCCCCcccEEEEECCCCCeEE--------------EEECC-CCccceEECCCC
Confidence 11 11224 899999997 4544444 3 99999999988431 12222 335789999986
Q ss_pred --eEEEEc-CCc-EEEEECCCCceEEE----EeeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCee--
Q 046773 307 --SAVACT-SSR-VITFDLRNQGMVLG----ERGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEE-- 375 (453)
Q Consensus 307 --~~vas~-d~t-IrlWDl~t~~~~~~----~~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~-- 375 (453)
+++++. ++. |++||+...+.+.. .........-.+|+++|+.++.++ .++ .+++|++.+++.
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~-------~v~v~d~~~~~~~~ 212 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN-------SIGILETQNPENIT 212 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT-------EEEEEECSSTTSCE
T ss_pred CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC-------eEEEEECCCCcccc
Confidence 445543 477 99999987554321 112223344456788888655544 566 999999999887
Q ss_pred -EEEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEEECCCCeE--EEEeccc----CCce-E---EEEecCCCEEE-EE
Q 046773 376 -VCRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVWEVEGGEY--MYSFRER----IGEE-V---IAFVGDDRHVA-AS 441 (453)
Q Consensus 376 -v~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~tG~~--l~tL~gh----~~~~-V---~a~s~d~~~la-sg 441 (453)
+..+... .....+.++|++++++.+.. +.|.+||+++++. +.++..+ .... . .+|+||+++|+ ++
T Consensus 213 ~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 291 (331)
T 3u4y_A 213 LLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISA 291 (331)
T ss_dssp EEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEE
T ss_pred eeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEec
Confidence 7766543 44677899999998776653 8999999999987 5555433 1110 1 38899999885 44
Q ss_pred -eCCcEEEEecC
Q 046773 442 -CGTNIHLWDFG 452 (453)
Q Consensus 442 -~D~~IklWDl~ 452 (453)
.+++|+|||+.
T Consensus 292 ~~~~~v~v~d~~ 303 (331)
T 3u4y_A 292 NISRELKVFTIS 303 (331)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCcEEEEEec
Confidence 67899999985
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=9e-20 Score=198.66 Aligned_cols=286 Identities=8% Similarity=-0.015 Sum_probs=187.3
Q ss_pred EEEEEecC--CEEEEEeC-CC-----cEEEEECCCCeEEEEecCCCCCccc--------cc--------cceEEEEEE--
Q 046773 147 CRCLTLSD--LYLACGFA-DG-----AVRLFDLTTRLHVRTFRPQHSDRLG--------QF--------SRAVSGIII-- 200 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~-D~-----TIrlWD~~tg~~~~tl~gh~~~~~~--------~~--------s~~V~~i~f-- 200 (453)
+.+++||+ ++||+++. |+ +|++||+.+|++.+.+..+....-+ .. ...|.+++|
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 67888875 69999998 88 9999999999988887643211000 00 001334455
Q ss_pred cCCeEEEEeCCCCEEEEEeecC---CcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEeccc
Q 046773 201 TDSQLIFATLDGDIHVAVIDDV---ANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGD 277 (453)
Q Consensus 201 ~g~~LasgS~D~tIkvWd~~~~---g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~ 277 (453)
||+.|++++. ++|++||+.+. ....+..|...+ ..++|||||++ ||.++ +++|++||+.+++...
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~----~~~~~SPDG~~---la~~~-~~~i~~~d~~~g~~~~--- 186 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFA----TDAKLSPKGGF---VSFIR-GRNLWVIDLASGRQMQ--- 186 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCE----EEEEECTTSSE---EEEEE-TTEEEEEETTTTEEEE---
T ss_pred CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCccc----ccccCCCCCCE---EEEEe-CCcEEEEecCCCCEEE---
Confidence 5788999886 89999999873 223333343332 24899999997 56665 5699999999987321
Q ss_pred ccCCcceeeeeeeeeecc--------ceeEEEEcCCce--EEEEcCC---------------------------------
Q 046773 278 LTDHNTVMGWRMLTEFTE--------FVGRVRVTSHES--AVACTSS--------------------------------- 314 (453)
Q Consensus 278 l~~~~~v~~w~~l~~h~~--------~v~~v~~s~~~~--~vas~d~--------------------------------- 314 (453)
++..... ....++.+ .+..+.|+|++. +.++.|+
T Consensus 187 ~~~~~~~---~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 187 LTADGST---TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp CCCCCCS---SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred eccCCcc---ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 0000000 00011111 146789998874 4444443
Q ss_pred cEEEEECCC-CceEEEEee--ccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC----Cee
Q 046773 315 RVITFDLRN-QGMVLGERG--YGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD----RNV 387 (453)
Q Consensus 315 tIrlWDl~t-~~~~~~~~g--~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~----~v~ 387 (453)
+|++||+.+ +++.....+ |.....-.++ ++|+.++.++.+. .+++.++.+||..++++...+..+.. .+.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~--~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR--DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEET--TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecc--cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 788999998 875433222 3333344568 9999988776533 12344899999999987776665542 235
Q ss_pred EEEEeeCCCeEEEEeC-CeEEEEECC-CCeEEEEecccCCceEE---EEecCCCEEE-EE-eCC--cEEEEecC
Q 046773 388 NVMGCMNQGYALMCVE-GVIRVWEVE-GGEYMYSFRERIGEEVI---AFVGDDRHVA-AS-CGT--NIHLWDFG 452 (453)
Q Consensus 388 ~~~~~~~~~~lls~s~-~tIrlWD~~-tG~~l~tL~gh~~~~V~---a~s~d~~~la-sg-~D~--~IklWDl~ 452 (453)
.+.++++++.+++++. ++++||.+. +++ +..|..|... |. +|+||+++|+ ++ .|+ +++||++.
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~-v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWS-VDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSC-EEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceE-EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 7889999886555555 778888765 456 8888888766 54 4899999875 45 555 89999863
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=1.1e-19 Score=186.80 Aligned_cols=242 Identities=10% Similarity=0.034 Sum_probs=172.9
Q ss_pred CCEEEEEeCC------CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCC---CEEEEEeecC
Q 046773 154 DLYLACGFAD------GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDG---DIHVAVIDDV 222 (453)
Q Consensus 154 ~~~LaSGS~D------~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~---tIkvWd~~~~ 222 (453)
+..||.++.+ ++|++||++ +.++++|.+|.. .|.+++|+ |+.|++++.|+ +|++||+.+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~--------~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t- 212 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQ--------PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN- 212 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESS--------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCC--------cceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-
Confidence 4566666654 799999997 456778877643 46667764 77899999986 899999987
Q ss_pred C-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCC--eEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeE
Q 046773 223 A-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGR--AFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGR 299 (453)
Q Consensus 223 g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~--tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~ 299 (453)
+ ...+..|.+.+ ..++|+|||+++ +++++.|+ .|.+||+++++.. .+..|...+.+
T Consensus 213 g~~~~l~~~~~~~----~~~~~spdg~~l--a~~~~~~g~~~i~~~d~~~~~~~---------------~l~~~~~~~~~ 271 (415)
T 2hqs_A 213 GAVRQVASFPRHN----GAPAFSPDGSKL--AFALSKTGSLNLYVMDLASGQIR---------------QVTDGRSNNTE 271 (415)
T ss_dssp CCEEEEECCSSCE----EEEEECTTSSEE--EEEECTTSSCEEEEEETTTCCEE---------------ECCCCSSCEEE
T ss_pred CcEEEeecCCCcc----cCEEEcCCCCEE--EEEEecCCCceEEEEECCCCCEE---------------eCcCCCCcccc
Confidence 5 33333344332 258999999972 33666665 4999999998742 24566678899
Q ss_pred EEEcCCce--EEEEcC-C--cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe
Q 046773 300 VRVTSHES--AVACTS-S--RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE 374 (453)
Q Consensus 300 v~~s~~~~--~vas~d-~--tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~ 374 (453)
++|+|++. +.++.+ + .|.+||+.++++ ..+..+...+...+|+|+|+.++.++.+. .+..+.+|+.++++
T Consensus 272 ~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~----g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 272 PTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNG----GQQHIAKQDLATGG 346 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECS----SCEEEEEEETTTCC
T ss_pred eEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcC----CceEEEEEECCCCC
Confidence 99999874 344543 3 588889998764 33333444444467888899888887652 12389999999987
Q ss_pred eEEEEEecCCCeeEEEEeeCCCeEEEEeC-C---eEEEEECCCCeEEEEecccCCceEE--EEecCC
Q 046773 375 EVCRFSLRADRNVNVMGCMNQGYALMCVE-G---VIRVWEVEGGEYMYSFRERIGEEVI--AFVGDD 435 (453)
Q Consensus 375 ~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~---tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~ 435 (453)
.. .+..+. .+..+.++|++++++.++. + .|++||+. |+++..|.+|.+. |. +++|-.
T Consensus 347 ~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~-v~~~~~~~~~ 409 (415)
T 2hqs_A 347 VQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQ-VKFPAWSPYL 409 (415)
T ss_dssp EE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSE-EEEEEECCCC
T ss_pred EE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCC-CcCCcccccc
Confidence 63 444443 6788999999998887765 3 89999997 6778899999888 87 566643
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=3.7e-19 Score=172.86 Aligned_cols=270 Identities=7% Similarity=-0.082 Sum_probs=175.4
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeE-EEEeCCCCEEEEEeecCCc--ceEEe
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQL-IFATLDGDIHVAVIDDVAN--ETRTA 229 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~L-asgS~D~tIkvWd~~~~g~--~~~~~ 229 (453)
++|++++.|++|++||+.+++.++++...+.. + .+..++| +++.| ++++.+++|.+||+.+ +. ..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~----~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAG--P----TPMVPMVAPGGRIAYATVNKSESLVKIDLVT-GETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCT--T----CCCCEEECTTSSEEEEEETTTTEEEEEETTT-CCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCC--C----CccceEEcCCCCEEEEEeCCCCeEEEEECCC-CCeEeeEEc
Confidence 47899999999999999999999888632210 0 0223555 46555 5566788999999887 41 22221
Q ss_pred eecc-eecCceEEEEeCCCceeeEEEEee------------CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccc
Q 046773 230 HFGS-VMDDGVLIDFTGCSRYWVGLYAGL------------AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEF 296 (453)
Q Consensus 230 ~~~~-v~~~~~~v~Fs~dg~~~~~LaSgS------------~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~ 296 (453)
.... .......++|+|||++ |++++ .|+.|.+||+++++... .+.. ...
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~---l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--------------~~~~-~~~ 136 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKT---LAIYESPVRLELTHFEVQPTRVALYDAETLSRRK--------------AFEA-PRQ 136 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSE---EEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE--------------EEEC-CSS
T ss_pred CCcccccccccceEECCCCCE---EEEEecccccccccccccCceEEEEECCCCcEEE--------------EEeC-CCC
Confidence 1000 0001124899999986 45554 57999999999887431 1111 234
Q ss_pred eeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCcc-----------------c
Q 046773 297 VGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELE-----------------N 359 (453)
Q Consensus 297 v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~-----------------~ 359 (453)
+..++|+|++..+...++.|++||+++++.+.....+.... ...+++++..++..+..+.. .
T Consensus 137 ~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (337)
T 1pby_B 137 ITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEA-ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215 (337)
T ss_dssp CCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTT-TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGG
T ss_pred cceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCC-CceeCCCccEEeeeccCCCceeeeeecccccccccccc
Confidence 56788998875332227899999999987655442221001 12567777755433322200 0
Q ss_pred cCcceEEEEEcCCCeeEEEEEe--cCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecccCCceEEEEecCCCE
Q 046773 360 QNRRLAIVRRVDTFEEVCRFSL--RADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRH 437 (453)
Q Consensus 360 ~~~~~i~Iw~~~tg~~v~~l~~--~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~ 437 (453)
.....+.+||..+++.. .+.. +......+.+++++++++++ +++|++||+++++.+..+..+....-.+|+||+++
T Consensus 216 ~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 216 AYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGST 293 (337)
T ss_dssp GEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCE
T ss_pred ccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCCceeeEEECCCCCE
Confidence 00114688999988765 3333 33446678899999887766 69999999999999888865433312378899999
Q ss_pred EEEE-eCCcEEEEecC
Q 046773 438 VAAS-CGTNIHLWDFG 452 (453)
Q Consensus 438 lasg-~D~~IklWDl~ 452 (453)
|+++ .|+.|++||+.
T Consensus 294 l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 294 VWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEESBSSEEEEEETT
T ss_pred EEEEcCCCcEEEEECc
Confidence 9888 99999999974
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=4.6e-20 Score=200.13 Aligned_cols=283 Identities=11% Similarity=0.023 Sum_probs=178.8
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC---------CC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD---------GD 213 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D---------~t 213 (453)
+.+++|++ ++|++ +.|++|++||+.+|++.+.+.+|....+ .|.+++| ||+.|++++.| ++
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~-----~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESL-----RAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTT-----TCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecccccccc-----ccceEEECCCCCEEEEEecCccceeecceee
Confidence 35677875 56666 7899999999999999988876542101 1344555 67889999875 67
Q ss_pred EEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEE--e-cccccCCcceeeeee
Q 046773 214 IHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVF--V-GGDLTDHNTVMGWRM 289 (453)
Q Consensus 214 IkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~--~-g~~l~~~~~v~~w~~ 289 (453)
|++||+++ + ...+....+.- .....++|||||++ ||.++. ++|++||+.+++.. . .+. ..+ .
T Consensus 93 i~~~d~~~-~~~~~l~~~~~~~-~~~~~~~~SPdG~~---la~~~~-~~i~~~~~~~g~~~~~~~~~~----~~~----~ 158 (723)
T 1xfd_A 93 YVLSKIPH-GDPQSLDPPEVSN-AKLQYAGWGPKGQQ---LIFIFE-NNIYYCAHVGKQAIRVVSTGK----EGV----I 158 (723)
T ss_dssp EEEEESSS-CCCEECCCTTCCS-CCCSBCCBCSSTTC---EEEEET-TEEEEESSSSSCCEEEECCCB----TTT----E
T ss_pred EEEEECCC-CceEeccCCcccc-ccccccEECCCCCE---EEEEEC-CeEEEEECCCCceEEEecCCC----CCc----e
Confidence 78999987 4 22222221110 00113789999997 666665 79999999998722 1 100 000 0
Q ss_pred eeeeccc---------eeEEEEcCCceE--EEEcCC----------------------------------cEEEEECCCC
Q 046773 290 LTEFTEF---------VGRVRVTSHESA--VACTSS----------------------------------RVITFDLRNQ 324 (453)
Q Consensus 290 l~~h~~~---------v~~v~~s~~~~~--vas~d~----------------------------------tIrlWDl~t~ 324 (453)
+.++.++ +.+++|+|++.. .++.+. +|++||+.++
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred ECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 1233332 368999998743 333322 7999999998
Q ss_pred ceEEEEeec----cCCeEE--EEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEec-CCCe----eEEEEee
Q 046773 325 GMVLGERGY----GRGLYV--TSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLR-ADRN----VNVMGCM 393 (453)
Q Consensus 325 ~~~~~~~g~----~~~~~v--~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~-~~~v----~~~~~~~ 393 (453)
++...+..+ .+...+ .+++|+|+.+++.+..+ +++..+.+||++++++...+..+ ..++ ..+.++|
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 315 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA---QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSK 315 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT---SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECT
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC---CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcC
Confidence 754444322 112334 45677777676665443 23448999999999877665443 2333 3678999
Q ss_pred CCCeEEEE-eC--C------eEEEEE-CCCCe--EEEEecccCCceE--EEEecCCCEEEEE--eC--CcEEEEecC
Q 046773 394 NQGYALMC-VE--G------VIRVWE-VEGGE--YMYSFRERIGEEV--IAFVGDDRHVAAS--CG--TNIHLWDFG 452 (453)
Q Consensus 394 ~~~~lls~-s~--~------tIrlWD-~~tG~--~l~tL~gh~~~~V--~a~s~d~~~lasg--~D--~~IklWDl~ 452 (453)
++++++.. +. + .|.+|| ..+++ ++..|..+....+ -+++||+++|+.. .| +.++||++.
T Consensus 316 dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 316 DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 99988754 32 5 577778 45555 2666764333313 2789999998754 44 889999874
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=1.2e-18 Score=188.87 Aligned_cols=272 Identities=9% Similarity=-0.018 Sum_probs=178.8
Q ss_pred EEEEEecCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeec----
Q 046773 147 CRCLTLSDL-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDD---- 221 (453)
Q Consensus 147 v~~lafs~~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~---- 221 (453)
|.+++||++ +|+.+ .|++|++||+.++++.+... +.... ..+ ++++||+.|++ +.|++|++|++.+
T Consensus 84 v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~-~~~~~-----~~~-~~SpdG~~la~-~~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 84 SFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFD-TNEET-----ASL-DFSPVGDRVAY-VRNHNLYIARGGKLGEG 154 (706)
T ss_dssp CEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEEC-CTTCC-----TTC-EECTTSSEEEE-EETTEEEEEECBCTTSC
T ss_pred ceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccC-Ccccc-----cCC-cCCCCCCEEEE-EECCeEEEEecCccccc
Confidence 689999974 55544 47999999999998765543 32211 011 24456888998 5789999999976
Q ss_pred -CCcce-EEeeecceecC----------ceEEEEeCCCceeeEEEEee--------------------------------
Q 046773 222 -VANET-RTAHFGSVMDD----------GVLIDFTGCSRYWVGLYAGL-------------------------------- 257 (453)
Q Consensus 222 -~g~~~-~~~~~~~v~~~----------~~~v~Fs~dg~~~~~LaSgS-------------------------------- 257 (453)
..... ...+...+... ...+.|||||++ |++++
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~---la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC---LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE---EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE---EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 22111 11111211100 124899999997 56666
Q ss_pred -CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce--EEEEcCC-----cEEEEECCCCceEEE
Q 046773 258 -AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACTSS-----RVITFDLRNQGMVLG 329 (453)
Q Consensus 258 -~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~d~-----tIrlWDl~t~~~~~~ 329 (453)
.+.+|++||+++++...- .....|...+.+++|+|++. ++++.+. +|++||+++++++..
T Consensus 232 ~~~~~l~~~d~~~~~~~~~------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYL------------QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp CCEEEEEEEETTTTEEEEC------------CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE
T ss_pred CCeeEEEEEECCCCceEee------------ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE
Confidence 457899999999884210 00113456788999999884 3444443 899999999844433
Q ss_pred E-e-eccCC---eEEEEEEe--cCCEEEEEeCCCccccCcceEEEEEcC-CCeeEEEEEecCCCeeE-EEEeeCCCeEEE
Q 046773 330 E-R-GYGRG---LYVTSVDV--NAEAYIVVENRELENQNRRLAIVRRVD-TFEEVCRFSLRADRNVN-VMGCMNQGYALM 400 (453)
Q Consensus 330 ~-~-g~~~~---~~v~~~~~--~g~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~l~~~~~~v~~-~~~~~~~~~lls 400 (453)
. . .+... ....+|++ +|+.+++++.++ .++||+++ +++.+..++.+...+.. +.++++++.++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 300 LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp EEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEE
T ss_pred EEEccCCCeECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEE
Confidence 2 1 11111 01246788 888787777777 89999887 66777777666555665 688899988876
Q ss_pred EeC--C----eEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eC----CcEEEEecC
Q 046773 401 CVE--G----VIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CG----TNIHLWDFG 452 (453)
Q Consensus 401 ~s~--~----tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D----~~IklWDl~ 452 (453)
++. + .|..||+.+++ +..|. |... +. +|+||+++|+.. .+ +.|++||+.
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK-TKDLT-PESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC-CEESC-CSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred EecCCCCceEEEEEEEcCCCC-ceecc-CCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 654 4 67777888876 45554 5555 55 788999988765 43 469999974
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=1.5e-18 Score=197.67 Aligned_cols=268 Identities=13% Similarity=0.050 Sum_probs=196.2
Q ss_pred CCCCCCCeEEEEEEecCC-EEEEEeCCCcEEEEECCC-CeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEE
Q 046773 138 DVDNPDGLTCRCLTLSDL-YLACGFADGAVRLFDLTT-RLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIH 215 (453)
Q Consensus 138 gh~~~d~v~v~~lafs~~-~LaSGS~D~TIrlWD~~t-g~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIk 215 (453)
+|.. . +.+++|+++ ++++++.|++++||++.. +...+.+.+|... ...+++++|+.|++++ |++|+
T Consensus 201 ~~~~--~--v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~-------~~~~~SpDG~~la~~~-~~~i~ 268 (1045)
T 1k32_A 201 DMST--H--VSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDY-------YPRHLNTDGRRILFSK-GGSIY 268 (1045)
T ss_dssp CCSS--C--CEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSS-------CEEEEEESSSCEEEEE-TTEEE
T ss_pred CCCC--c--ccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCc-------ceeeEcCCCCEEEEEe-CCEEE
Confidence 6763 3 689999987 456778899999998764 5566777754421 2335778899999874 89999
Q ss_pred EEEeecCCcceEEe-----------eecceecCceEEEEe-CCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcc
Q 046773 216 VAVIDDVANETRTA-----------HFGSVMDDGVLIDFT-GCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 216 vWd~~~~g~~~~~~-----------~~~~v~~~~~~v~Fs-~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
+||++...+..+.. |...+ ..++|| |||++ |++++ +++|.+||+.+++...
T Consensus 269 ~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v----~~~~~S~pdG~~---la~~~-~~~i~~~~~~~~~~~~--------- 331 (1045)
T 1k32_A 269 IFNPDTEKIEKIEIGDLESPEDRIISIPSK----FAEDFSPLDGDL---IAFVS-RGQAFIQDVSGTYVLK--------- 331 (1045)
T ss_dssp EECTTTCCEEECCCCCCCBCCSEEEECGGG----GEEEEEECGGGC---EEEEE-TTEEEEECTTSSBEEE---------
T ss_pred EecCCceEeeeeccCccccccccccccccc----ceeeecCCCCCE---EEEEE-cCEEEEEcCCCCceEE---------
Confidence 99984411111111 11111 258999 99997 55666 7899999999887321
Q ss_pred eeeeeeeeeecc-ceeEEEEcCCc--eEEEEcCCcEE-EEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccc
Q 046773 284 VMGWRMLTEFTE-FVGRVRVTSHE--SAVACTSSRVI-TFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELEN 359 (453)
Q Consensus 284 v~~w~~l~~h~~-~v~~v~~s~~~--~~vas~d~tIr-lWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~ 359 (453)
+..|.. .+..++|+ ++ ++.++.+..+. +||+.+++. ..+.+|.......+++|+|+.+++++.++
T Consensus 332 ------~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~--- 400 (1045)
T 1k32_A 332 ------VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRF--- 400 (1045)
T ss_dssp ------CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTS---
T ss_pred ------ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-eEecCCccceeeeEECCCCCEEEEECCCC---
Confidence 334444 67778888 66 34445556788 889988654 33335545556677889999999999888
Q ss_pred cCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-C----------eEEEEECCCCeEEEEecccCCceE
Q 046773 360 QNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-G----------VIRVWEVEGGEYMYSFRERIGEEV 428 (453)
Q Consensus 360 ~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~----------tIrlWD~~tG~~l~tL~gh~~~~V 428 (453)
++++||+++++....+..+...+..+.++|++++++.++. + +|++||+.+++ +..+.+|... +
T Consensus 401 ----~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~-~ 474 (1045)
T 1k32_A 401 ----EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH-D 474 (1045)
T ss_dssp ----EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB-E
T ss_pred ----eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc-c
Confidence 9999999999887777677777888999999999887654 3 99999999998 7788888776 5
Q ss_pred E--EEecCCCEEEEE-eCCcEEEEec
Q 046773 429 I--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 429 ~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
. +|+|||++|+.+ .++..++|+.
T Consensus 475 ~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 475 YAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp EEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CCceEcCCCCEEEEEecccCCcCcch
Confidence 5 789999999888 7788888874
No 137
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=1.5e-18 Score=184.46 Aligned_cols=259 Identities=9% Similarity=-0.029 Sum_probs=170.7
Q ss_pred EEEEEec--CCEEEEEeC-CCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeE-EEEeC---CCCEEEEEe
Q 046773 147 CRCLTLS--DLYLACGFA-DGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQL-IFATL---DGDIHVAVI 219 (453)
Q Consensus 147 v~~lafs--~~~LaSGS~-D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~L-asgS~---D~tIkvWd~ 219 (453)
|++++|+ +++||++|. |++++||++++|++.+ +..|+. ..|.+++|+++++ ++++. +...+||.+
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~-------~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPI-------NSVLDPHYGVGRVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCC-------SEECEECTTCSEEEEEEECSTTSCCEEEEEE
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccc-------cccccccCCCCeEEEEeccCCCCcceEEEEE
Confidence 6777775 579999887 9999999998887654 444432 1466677876554 44554 466788877
Q ss_pred ec--CC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccc
Q 046773 220 DD--VA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEF 296 (453)
Q Consensus 220 ~~--~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~ 296 (453)
+. .| ...+....+. ...+|+|||+.+ .+++++.|+++ |||+++++.. .+..+..
T Consensus 96 ~~~~~g~~~~l~~~~~~-----~~~~~s~dg~~~-~~~s~~~~~~~-l~d~~~g~~~---------------~l~~~~~- 152 (582)
T 3o4h_A 96 NTSRPGEEQRLEAVKPM-----RILSGVDTGEAV-VFTGATEDRVA-LYALDGGGLR---------------ELARLPG- 152 (582)
T ss_dssp ETTSTTCCEECTTSCSB-----EEEEEEECSSCE-EEEEECSSCEE-EEEEETTEEE---------------EEEEESS-
T ss_pred eccCCCccccccCCCCc-----eeeeeCCCCCeE-EEEecCCCCce-EEEccCCcEE---------------EeecCCC-
Confidence 65 34 1211111111 135888998764 36677777666 9999998732 1222323
Q ss_pred eeEEEEcCCceEEE--EcC----CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEc
Q 046773 297 VGRVRVTSHESAVA--CTS----SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRV 370 (453)
Q Consensus 297 v~~v~~s~~~~~va--s~d----~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~ 370 (453)
.+++|+|++..++ +.+ .+|++||+++++.. ++.++.....-.+|+|+|+.+++.+.++ ..+|.+||+
T Consensus 153 -~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~-----~~~i~~~d~ 225 (582)
T 3o4h_A 153 -FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAR-----EARLVTVDP 225 (582)
T ss_dssp -CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSS-----CEEEEEECT
T ss_pred -ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCC-----eeEEEEEcC
Confidence 6788988775433 444 57999999988653 4444544445567888999988655555 127888899
Q ss_pred CCCeeEEEEEecCCCeeEEE--------EeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEE
Q 046773 371 DTFEEVCRFSLRADRNVNVM--------GCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVA 439 (453)
Q Consensus 371 ~tg~~v~~l~~~~~~v~~~~--------~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~la 439 (453)
++++.. .+..+...+..+. ++||+..+++++. ++++||++ |+++.++. +. |. +|+ |+++++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~~---~~-v~~~~~s-dg~~l~ 297 (582)
T 3o4h_A 226 RDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAPQ---GN-HGRVVLW-RGKLVT 297 (582)
T ss_dssp TTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCCS---SE-EEEEEEE-TTEEEE
T ss_pred CCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccCC---Cc-eEEEEec-CCEEEE
Confidence 888776 5555544455566 8999854445554 99999999 88876443 44 55 677 888888
Q ss_pred EE-eCC---cEEEEec
Q 046773 440 AS-CGT---NIHLWDF 451 (453)
Q Consensus 440 sg-~D~---~IklWDl 451 (453)
++ .+. .|.+||+
T Consensus 298 ~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 298 SHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEETTEEEEEEEETT
T ss_pred EEcCCCCCCeEEEEcC
Confidence 77 664 3666664
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=5.4e-17 Score=159.08 Aligned_cols=257 Identities=11% Similarity=0.066 Sum_probs=175.8
Q ss_pred EEEEEecC--CEEEEEeC-------CCcEEEEECCCCeEEEEecCCCCCccccccceEEEEE--EcCCeE-EEEeCCCCE
Q 046773 147 CRCLTLSD--LYLACGFA-------DGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGII--ITDSQL-IFATLDGDI 214 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~-------D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~--f~g~~L-asgS~D~tI 214 (453)
+..++|++ ++|+.++. +++|.+||+.+++.++++..... +.+++ .+++.+ ++.+.+++|
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK---------PFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC---------CCSEEEETTTTEEEEEETTTTEE
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC---------cceEEECCCCCEEEEEecCCCEE
Confidence 57888886 57776664 57899999999999988864221 12244 456755 455668999
Q ss_pred EEEEeecCC--cceEEeeeccee-----cCceEEEEeCCCceeeEEEEe--eCCCeEEEeeCCCCcEEecccccCCccee
Q 046773 215 HVAVIDDVA--NETRTAHFGSVM-----DDGVLIDFTGCSRYWVGLYAG--LAGRAFHIWDRQAEEVFVGGDLTDHNTVM 285 (453)
Q Consensus 215 kvWd~~~~g--~~~~~~~~~~v~-----~~~~~v~Fs~dg~~~~~LaSg--S~D~tIrvWD~~tg~~~~g~~l~~~~~v~ 285 (453)
.+||.++ + ...+..+.+... .....++|+|||++ |+.+ +.+++|.+||+++++...
T Consensus 114 ~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~---l~~~~~~~~~~i~~~d~~~~~~~~----------- 178 (353)
T 3vgz_A 114 TAIDAKT-GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT---VYISGIGKESVIWVVDGGNIKLKT----------- 178 (353)
T ss_dssp EEEETTT-CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE---EEEEEESSSCEEEEEETTTTEEEE-----------
T ss_pred EEEeCCC-CeeEEEEecCCCccccccCCCCCceEEECCCCCE---EEEEecCCCceEEEEcCCCCceEE-----------
Confidence 9999887 4 222222211100 00124899999996 3333 358899999999988431
Q ss_pred eeeeeeeeccceeEEEEcCCc--eEEEEcCCcEEEEECCCCceEEEEe----eccCCeEEEEEEecCCEEEEEeCC-Ccc
Q 046773 286 GWRMLTEFTEFVGRVRVTSHE--SAVACTSSRVITFDLRNQGMVLGER----GYGRGLYVTSVDVNAEAYIVVENR-ELE 358 (453)
Q Consensus 286 ~w~~l~~h~~~v~~v~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~----g~~~~~~v~~~~~~g~~l~s~s~d-g~~ 358 (453)
.+..+...+..+.|+|++ +++++.++.|.+||+++++.+.... ++.+...-.+++++++.++.++.+ +
T Consensus 179 ---~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-- 253 (353)
T 3vgz_A 179 ---AIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA-- 253 (353)
T ss_dssp ---EECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS--
T ss_pred ---EecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC--
Confidence 122223346678888776 4555567899999999987665542 123333345788889877666544 5
Q ss_pred ccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEecccCCceEE--EEecC
Q 046773 359 NQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGD 434 (453)
Q Consensus 359 ~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d 434 (453)
.+.+||..+++.+..+.... ...+.+++++++++.+. . ++|.+||+.+++.+..+..+. . +. +|+||
T Consensus 254 -----~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~-~~~~~~s~d 324 (353)
T 3vgz_A 254 -----EVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-H-PNSLALSAD 324 (353)
T ss_dssp -----EEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-E-EEEEEECTT
T ss_pred -----EEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-C-CCeEEEcCC
Confidence 99999999998887776543 35688899998776655 3 999999999999998887544 3 34 78899
Q ss_pred CCEEEEE
Q 046773 435 DRHVAAS 441 (453)
Q Consensus 435 ~~~lasg 441 (453)
+++|..+
T Consensus 325 g~~l~v~ 331 (353)
T 3vgz_A 325 GKTLYVS 331 (353)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 9976544
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=3.2e-17 Score=159.56 Aligned_cols=263 Identities=9% Similarity=0.033 Sum_probs=164.5
Q ss_pred EEEEEeCCCcEEEEECC-CC--eEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC-CCEEEEEee--cCC-cce
Q 046773 156 YLACGFADGAVRLFDLT-TR--LHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD-GDIHVAVID--DVA-NET 226 (453)
Q Consensus 156 ~LaSGS~D~TIrlWD~~-tg--~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D-~tIkvWd~~--~~g-~~~ 226 (453)
.+++++.|++|++||+. ++ +.+.++. |.. .+.+++| +++.|++++.+ ++|++|+++ + + ...
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~-~~~~~ 76 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVD-VPG--------QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD-GALTF 76 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS--------CCCCEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCC--------CCceEEECCCCCEEEEeecCCCeEEEEEecCCC-Cceee
Confidence 45666889999999995 45 3444443 222 2344666 46778888886 899999998 3 3 222
Q ss_pred EEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc
Q 046773 227 RTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE 306 (453)
Q Consensus 227 ~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~ 306 (453)
+...... .....++|+|+|+++ ++++..|++|++||+.+++...- ...+..+ ..+.+++|+|++
T Consensus 77 ~~~~~~~--~~~~~~~~s~dg~~l--~~~~~~~~~i~~~d~~~~~~~~~-----------~~~~~~~-~~~~~~~~s~dg 140 (343)
T 1ri6_A 77 AAESALP--GSLTHISTDHQGQFV--FVGSYNAGNVSVTRLEDGLPVGV-----------VDVVEGL-DGCHSANISPDN 140 (343)
T ss_dssp EEEEECS--SCCSEEEECTTSSEE--EEEETTTTEEEEEEEETTEEEEE-----------EEEECCC-TTBCCCEECTTS
T ss_pred ccccccC--CCCcEEEEcCCCCEE--EEEecCCCeEEEEECCCCccccc-----------cccccCC-CCceEEEECCCC
Confidence 2211110 112358999999962 34445589999999954431100 0112222 346778999876
Q ss_pred --eEEEE-cCCcEEEEECCC-CceEE----EEee-ccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCC--Ce
Q 046773 307 --SAVAC-TSSRVITFDLRN-QGMVL----GERG-YGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDT--FE 374 (453)
Q Consensus 307 --~~vas-~d~tIrlWDl~t-~~~~~----~~~g-~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~t--g~ 374 (453)
+++++ .+++|++||+.+ ++... .... ........+++++++.++.++ .++ .++||+++. ++
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~-------~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS-------SVDVWELKDPHGN 213 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT-------EEEEEESSCTTSC
T ss_pred CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC-------EEEEEEecCCCCc
Confidence 44555 568999999998 54321 1111 122333456778888665554 566 999999953 43
Q ss_pred e--EEEEEecC------CCeeEEEEeeCCCeEEEEe-C-CeEEEEECC--CC--eEEEEecccCCceEEEEecCCCEEEE
Q 046773 375 E--VCRFSLRA------DRNVNVMGCMNQGYALMCV-E-GVIRVWEVE--GG--EYMYSFRERIGEEVIAFVGDDRHVAA 440 (453)
Q Consensus 375 ~--v~~l~~~~------~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~--tG--~~l~tL~gh~~~~V~a~s~d~~~las 440 (453)
. +..+...+ .....+.+++++++++++. . ++|++||+. ++ +.+..+..+....-.+|+||+++|+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIA 293 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEE
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEE
Confidence 2 33332112 1344688999998887555 3 999999998 33 55656654433212278999998776
Q ss_pred E--eCCcEEEEec
Q 046773 441 S--CGTNIHLWDF 451 (453)
Q Consensus 441 g--~D~~IklWDl 451 (453)
+ .|+.|.||++
T Consensus 294 ~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 294 AGQKSHHISVYEI 306 (343)
T ss_dssp ECTTTCEEEEEEE
T ss_pred ecCCCCeEEEEEE
Confidence 6 6899999965
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=2.4e-18 Score=187.38 Aligned_cols=267 Identities=9% Similarity=0.019 Sum_probs=180.1
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCe--EEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCCCEEEEEee
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRL--HVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGDIHVAVID 220 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~--~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~tIkvWd~~ 220 (453)
+.+++||+ ++|++++. ++|++||+.+++ .++.+..|.. .+..++| ||+.|++++ +++|++||+.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~--------~~~~~~~SPDG~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEG--------FATDAKLSPKGGFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSS--------CEEEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCc--------ccccccCCCCCCEEEEEe-CCcEEEEecC
Confidence 45778875 68999886 999999999993 3455665432 3555665 577899987 5689999988
Q ss_pred cCCcceEEe---eecceecC------------ceEEEEeCCCceeeEEEEeeCCC-------------------------
Q 046773 221 DVANETRTA---HFGSVMDD------------GVLIDFTGCSRYWVGLYAGLAGR------------------------- 260 (453)
Q Consensus 221 ~~g~~~~~~---~~~~v~~~------------~~~v~Fs~dg~~~~~LaSgS~D~------------------------- 260 (453)
+ + ...+. +...+... ...++|||||++ |++++.|+
T Consensus 181 ~-g-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~---l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 181 S-G-RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA---IAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp T-T-EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC---EEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred C-C-CEEEeccCCccceeccccceeeeeccccccceEECCCCCE---EEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 7 4 12111 11111000 124899999997 66776665
Q ss_pred --------eEEEeeCCC-CcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceE--EEEc-----CCcEEEEECCCC
Q 046773 261 --------AFHIWDRQA-EEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESA--VACT-----SSRVITFDLRNQ 324 (453)
Q Consensus 261 --------tIrvWD~~t-g~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~--vas~-----d~tIrlWDl~t~ 324 (453)
+|.+||+++ ++...- .....|...+.+++| |++.. +++. +.+|++||++++
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~------------~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWI------------DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEE------------CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred CCCCCCeeEEEEEECCCCCceEEe------------cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence 889999998 873210 000135567888999 88743 3332 257999999998
Q ss_pred ceEEEEeeccC----CeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC-CCeeEEEEEecCCCeeEE-EEeeCCCeE
Q 046773 325 GMVLGERGYGR----GLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD-TFEEVCRFSLRADRNVNV-MGCMNQGYA 398 (453)
Q Consensus 325 ~~~~~~~g~~~----~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~l~~~~~~v~~~-~~~~~~~~l 398 (453)
++......+.. .....+|+++|+.+++++.++ .++||.++ +++ +..++.+...+..+ .++++++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 323 QQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp CEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred ceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence 76554433321 111357888998778877777 88999887 445 66666666557676 489999888
Q ss_pred EEEeC--C--eEEEEECCC-CeEEEEecccCCceEE--EEecCCCEEEEE-eC----CcEEEEec
Q 046773 399 LMCVE--G--VIRVWEVEG-GEYMYSFRERIGEEVI--AFVGDDRHVAAS-CG----TNIHLWDF 451 (453)
Q Consensus 399 ls~s~--~--tIrlWD~~t-G~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D----~~IklWDl 451 (453)
+.++. + +++||++.. |+++..|.+ .+. +. +|+||+++|+.. .+ ..+.+||.
T Consensus 395 ~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~-~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPLQGGQPQRLSK-APG-MHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EEEECSSCTTCBEEEEEETTCCCCEECCC-SCS-EEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEeCCCCceEEEEEEEcCCCCeeeccc-CCC-ceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 75554 3 999999975 777788876 444 44 789999988755 32 46778875
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=1.2e-17 Score=158.04 Aligned_cols=242 Identities=8% Similarity=-0.035 Sum_probs=161.4
Q ss_pred EEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeec-CCc-ceEEeee-c
Q 046773 158 ACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDD-VAN-ETRTAHF-G 232 (453)
Q Consensus 158 aSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~-~g~-~~~~~~~-~ 232 (453)
.+++.|++|++||+.+++....+ .|.. .|.+++|+ ++.|++++ ++.|++||+++ ... .....+. .
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~~~-~~~~--------~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRVVW-QTPE--------LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATI 85 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEEEE-EESS--------CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCC
T ss_pred CCCCcceeEEEEeCCCCceeeec-cCCc--------ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccc
Confidence 35678999999999999976544 3432 46667765 67888876 88999999876 221 1111221 1
Q ss_pred ceecCceEEEEeCCCceeeEEEEee--CCCeEEEeeC--CCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce-
Q 046773 233 SVMDDGVLIDFTGCSRYWVGLYAGL--AGRAFHIWDR--QAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES- 307 (453)
Q Consensus 233 ~v~~~~~~v~Fs~dg~~~~~LaSgS--~D~tIrvWD~--~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~- 307 (453)
.+ ..++|+|||++ |++++ .|+.++||++ .+++.. .+..+ ..+..++++|++.
T Consensus 86 ~~----~~~~~spdg~~---l~~~~~~~~~~~~l~~~~~~~~~~~---------------~~~~~-~~~~~~~~spdg~~ 142 (297)
T 2ojh_A 86 CN----NDHGISPDGAL---YAISDKVEFGKSAIYLLPSTGGTPR---------------LMTKN-LPSYWHGWSPDGKS 142 (297)
T ss_dssp BC----SCCEECTTSSE---EEEEECTTTSSCEEEEEETTCCCCE---------------ECCSS-SSEEEEEECTTSSE
T ss_pred cc----cceEECCCCCE---EEEEEeCCCCcceEEEEECCCCceE---------------EeecC-CCccceEECCCCCE
Confidence 11 13799999997 66666 4456666654 455421 12222 3477889998774
Q ss_pred -E-EEEcCCcEEEEEC--CCCceEEEEeeccCCeEEEEEEecCCEEEEEeC-CCccccCcceEEEEEcC-CCeeEEEEEe
Q 046773 308 -A-VACTSSRVITFDL--RNQGMVLGERGYGRGLYVTSVDVNAEAYIVVEN-RELENQNRRLAIVRRVD-TFEEVCRFSL 381 (453)
Q Consensus 308 -~-vas~d~tIrlWDl--~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~-dg~~~~~~~~i~Iw~~~-tg~~v~~l~~ 381 (453)
+ +++.+++++||++ .++. ...+..+.......+++++++.++.++. ++ .++||+++ .+..+..+..
T Consensus 143 l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 143 FTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECCC
T ss_pred EEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEec
Confidence 3 3345788999985 4433 3333334444555667788887776664 67 88999887 4556666665
Q ss_pred cCCCeeEEEEeeCCCeEEEEeC------------CeEEEEECCCCeE--EEEecccCCceEE--EEecCCCEEEEE
Q 046773 382 RADRNVNVMGCMNQGYALMCVE------------GVIRVWEVEGGEY--MYSFRERIGEEVI--AFVGDDRHVAAS 441 (453)
Q Consensus 382 ~~~~v~~~~~~~~~~~lls~s~------------~tIrlWD~~tG~~--l~tL~gh~~~~V~--a~s~d~~~lasg 441 (453)
+...+..+.+++++++++.++. ..|.+||+++++. +..+.+|... +. +|+||+++|+++
T Consensus 215 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGT-MNSPNWSPDGDEFAYV 289 (297)
T ss_dssp CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTT-SCSCCBCTTSSEEEEE
T ss_pred CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcc-cccceECCCCCEEEEE
Confidence 5555777889999998876653 4699999999865 5556677766 65 788999998876
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=4.7e-18 Score=184.28 Aligned_cols=287 Identities=10% Similarity=-0.053 Sum_probs=170.4
Q ss_pred EEecCCEEEEEeCCCcEEEEECCCCeEE-EEecCCCCCc--cc-------cccceEEEEEEcCC-eEEEEeCCCCEEEEE
Q 046773 150 LTLSDLYLACGFADGAVRLFDLTTRLHV-RTFRPQHSDR--LG-------QFSRAVSGIIITDS-QLIFATLDGDIHVAV 218 (453)
Q Consensus 150 lafs~~~LaSGS~D~TIrlWD~~tg~~~-~tl~gh~~~~--~~-------~~s~~V~~i~f~g~-~LasgS~D~tIkvWd 218 (453)
+++.++.+++++.|+ | +||+.||+.+ +++..|.... +. .....|.+++|+++ .++. +.|++|++||
T Consensus 31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~-~~~~~i~~~d 107 (706)
T 2z3z_A 31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVL-FTQGGLVGFD 107 (706)
T ss_dssp CEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEE-EETTEEEEEE
T ss_pred CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEE-EECCEEEEEE
Confidence 444477888888888 8 9999999984 5554432100 00 00024677888754 4444 4679999999
Q ss_pred eecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCC-----CcEEecccccCCcceeeeeeeee
Q 046773 219 IDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQA-----EEVFVGGDLTDHNTVMGWRMLTE 292 (453)
Q Consensus 219 ~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~t-----g~~~~g~~l~~~~~v~~w~~l~~ 292 (453)
+.+ + ...+..+...+. .++|||||++ ||+ +.|++|+|||+.+ ++...--.........+....+.
T Consensus 108 ~~~-~~~~~l~~~~~~~~----~~~~SpdG~~---la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 108 MLA-RKVTYLFDTNEETA----SLDFSPVGDR---VAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TTT-TEEEEEECCTTCCT----TCEECTTSSE---EEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CCC-CceEEccCCccccc----CCcCCCCCCE---EEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 987 4 222332322221 3799999997 555 4689999999998 76321000000000000000111
Q ss_pred eccceeEEEEcCCceE--EEE---------------------------------cCCcEEEEECCCCceEEEEe--eccC
Q 046773 293 FTEFVGRVRVTSHESA--VAC---------------------------------TSSRVITFDLRNQGMVLGER--GYGR 335 (453)
Q Consensus 293 h~~~v~~v~~s~~~~~--vas---------------------------------~d~tIrlWDl~t~~~~~~~~--g~~~ 335 (453)
+...+.++.|+|++.. +++ .+.+|++||+++++...... .+..
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 2233578999998853 334 12569999999976533322 2322
Q ss_pred CeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE-e-cCCC---eeEEEEee--CCCeEEEEeC-CeEE
Q 046773 336 GLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS-L-RADR---NVNVMGCM--NQGYALMCVE-GVIR 407 (453)
Q Consensus 336 ~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~-~-~~~~---v~~~~~~~--~~~~lls~s~-~tIr 407 (453)
.....+++|+|+.+++++.+. .++..++.+||.++++.+..+. . +..+ +..+.+++ +++++++++. ++++
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~--~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNR--AQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECT--TSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred eEeeEEEECCCCEEEEEEeCC--CCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 233455677888888877654 2234488999999984444432 2 2222 25678898 8876665555 8899
Q ss_pred EEECC-CCeEEEEecccCCceEE---EEecCCCEEEEE--eCC----cEEEEec
Q 046773 408 VWEVE-GGEYMYSFRERIGEEVI---AFVGDDRHVAAS--CGT----NIHLWDF 451 (453)
Q Consensus 408 lWD~~-tG~~l~tL~gh~~~~V~---a~s~d~~~lasg--~D~----~IklWDl 451 (453)
||++. +++++..|.+|... |. +|+||++.|+.+ .++ .|..||+
T Consensus 337 l~~~~~~~~~~~~l~~~~~~-v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTKGEWE-VTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEEEETTSCEEEECCCSSSC-EEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EEEEECCCCEEEecCCCCeE-EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 99886 78888999888766 53 688999987644 444 4555554
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=1.1e-16 Score=182.23 Aligned_cols=280 Identities=12% Similarity=0.022 Sum_probs=185.1
Q ss_pred EEEEecC--CEEEEEeCC------CcEEEEECCCCeEEEEecCCCCCc-------------------c------------
Q 046773 148 RCLTLSD--LYLACGFAD------GAVRLFDLTTRLHVRTFRPQHSDR-------------------L------------ 188 (453)
Q Consensus 148 ~~lafs~--~~LaSGS~D------~TIrlWD~~tg~~~~tl~gh~~~~-------------------~------------ 188 (453)
.+++||+ +++++++.| ..|.+||+.++++.+ +..++... +
T Consensus 110 ~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw 188 (1045)
T 1k32_A 110 DVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP-LNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIW 188 (1045)
T ss_dssp EEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE-CCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEE
T ss_pred ccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEE-ecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEE
Confidence 7889985 578888865 468888898887643 32221100 0
Q ss_pred -----------ccccceEEEEEEcCCeEE-EEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEE
Q 046773 189 -----------GQFSRAVSGIIITDSQLI-FATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLY 254 (453)
Q Consensus 189 -----------~~~s~~V~~i~f~g~~La-sgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~La 254 (453)
..+...+.+++|+++.++ +++.|++++||.++..+ ...+..|.. + ..++|+|||++ |+
T Consensus 189 ~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~----~~~~~SpDG~~---la 260 (1045)
T 1k32_A 189 IEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-Y----YPRHLNTDGRR---IL 260 (1045)
T ss_dssp EEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCS-S----CEEEEEESSSC---EE
T ss_pred EECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCC-c----ceeeEcCCCCE---EE
Confidence 001123455677776654 56778999999987533 233333321 1 24699999997 55
Q ss_pred EeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEc-CCce-EEEEcCCcEEEEECCCCceEEEEee
Q 046773 255 AGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT-SHES-AVACTSSRVITFDLRNQGMVLGERG 332 (453)
Q Consensus 255 SgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s-~~~~-~vas~d~tIrlWDl~t~~~~~~~~g 332 (453)
.+ .|++|.+||+.+++... +..+..... .....|...+.+++|+ |++. ++.+.++.|.+||+.++.. ..+..
T Consensus 261 ~~-~~~~i~~~d~~~~~l~~---l~~~~~~~~-~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~-~~~~~ 334 (1045)
T 1k32_A 261 FS-KGGSIYIFNPDTEKIEK---IEIGDLESP-EDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYV-LKVPE 334 (1045)
T ss_dssp EE-ETTEEEEECTTTCCEEE---CCCCCCCBC-CSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBE-EECSC
T ss_pred EE-eCCEEEEecCCceEeee---eccCccccc-ccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCce-EEccC
Confidence 55 48999999996555321 111100000 0122456678899999 9875 3334478999999998753 33333
Q ss_pred ccC-CeEEEEEEecCCEEEEEeCCCccccCcceEE-EEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEE
Q 046773 333 YGR-GLYVTSVDVNAEAYIVVENRELENQNRRLAI-VRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVW 409 (453)
Q Consensus 333 ~~~-~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~-Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlW 409 (453)
+.. .....+|+ +|+.++.++.+. .+. +|+.++++.. .+..+...+..+.++|+++++++++. ++|++|
T Consensus 335 ~~~~~~~~~~~s-dg~~l~~~s~~~-------~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TKVAFIHGTREG-------DFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 405 (1045)
T ss_dssp CSCEEEEEECSS-SEEEEEEEETTE-------EEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCcceEEeeeEc-CCCeEEEEECCC-------ceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEE
Confidence 332 22233445 566788777755 777 8888877543 34455566888999999999988877 999999
Q ss_pred ECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCC----------cEEEEecC
Q 046773 410 EVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGT----------NIHLWDFG 452 (453)
Q Consensus 410 D~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~----------~IklWDl~ 452 (453)
|+++|++...+.+|.+. |. +|+|||++|+++ .++ .|+|||+.
T Consensus 406 d~~tg~~~~~~~~~~~~-v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 406 DLETGKPTVIERSREAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp ETTTCCEEEEEECSSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred ECCCCceEEeccCCCCC-ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99999998888788776 55 789999999877 543 89999974
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=1.5e-16 Score=155.35 Aligned_cols=236 Identities=9% Similarity=0.036 Sum_probs=158.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeE-EEEeCCCCEEEEEeecCCcceEEee
Q 046773 154 DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQL-IFATLDGDIHVAVIDDVANETRTAH 230 (453)
Q Consensus 154 ~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~L-asgS~D~tIkvWd~~~~g~~~~~~~ 230 (453)
+.++++++.|++|++||+.+++.++++..+.. + .+..++| +++.+ ++++.+++|.+||+.+ +.......
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~--~-----~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~~~~~~~~ 82 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDK--F-----GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-CKNTFHAN 82 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSC--C-----SSCEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCC--C-----CCceeEECCCCCEEEEEeCCCCcEEEEeCCC-CcEEEEEE
Confidence 46899999999999999999999998874331 0 1233555 46655 4556789999999887 41111111
Q ss_pred ecce----ecCceEEEEeCCCceeeEEEEeeCC------------CeEEEeeCCCCcEEecccccCCcceeeeeeeeeec
Q 046773 231 FGSV----MDDGVLIDFTGCSRYWVGLYAGLAG------------RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFT 294 (453)
Q Consensus 231 ~~~v----~~~~~~v~Fs~dg~~~~~LaSgS~D------------~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~ 294 (453)
.... ......++|+|||++ |++++.| ++|.+||+++++... . ...+ .+.
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--------~---~~~~-~~~ 147 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKE---VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK--------P---VRTF-PMP 147 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSE---EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC--------C---SEEE-ECC
T ss_pred cccccccccccccceEECCCCCE---EEEEcccccccccccccCCCeEEEEECCCccccc--------e---eeec-cCC
Confidence 1110 001124899999997 5666654 899999999865210 0 0111 122
Q ss_pred cceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeecc----------------------------------------
Q 046773 295 EFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYG---------------------------------------- 334 (453)
Q Consensus 295 ~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~---------------------------------------- 334 (453)
..+.+++|+|++.+.++ +..|++||+++++.+.....+.
T Consensus 148 ~~~~~~~~s~dg~l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 226 (349)
T 1jmx_B 148 RQVYLMRAADDGSLYVA-GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDP 226 (349)
T ss_dssp SSCCCEEECTTSCEEEE-SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------
T ss_pred CcccceeECCCCcEEEc-cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCc
Confidence 34677889988764443 4459999999987655432111
Q ss_pred ----------------------------CCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCC
Q 046773 335 ----------------------------RGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADR 385 (453)
Q Consensus 335 ----------------------------~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~ 385 (453)
......++++ +++.++++ ++ .+.+||+.+++.+..+... ..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~-------~v~~~d~~~~~~~~~~~~~-~~ 296 (349)
T 1jmx_B 227 ATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LN-------RLAKYDLKQRKLIKAANLD-HT 296 (349)
T ss_dssp CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ES-------EEEEEETTTTEEEEEEECS-SC
T ss_pred cccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cC-------eEEEEECccCeEEEEEcCC-CC
Confidence 0001123446 77777666 66 8999999999887777543 34
Q ss_pred eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEeccc
Q 046773 386 NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRER 423 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh 423 (453)
+..+.++++++++++++. ++|++||+++++.+..++.+
T Consensus 297 ~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 297 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred ccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 678899999988887655 99999999999999888655
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=2.1e-15 Score=148.84 Aligned_cols=259 Identities=9% Similarity=0.030 Sum_probs=156.2
Q ss_pred CCCcEEEEEC--CCCeEEE-EecCCCCCccccccceEEEEEEc--CCeEEEEeC---CCCEEEEEeecCC-cceEEe---
Q 046773 162 ADGAVRLFDL--TTRLHVR-TFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATL---DGDIHVAVIDDVA-NETRTA--- 229 (453)
Q Consensus 162 ~D~TIrlWD~--~tg~~~~-tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~---D~tIkvWd~~~~g-~~~~~~--- 229 (453)
.++.|.+|++ ++|+... .+..+.. .+..++|+ |+ |++++. +++|++|++++ + ...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~--------~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~-g~~~~~~~~~~ 83 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQ--------NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG-QTAHKLNTVVA 83 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECS--------CCCCEEECTTCE-EEEEEEETTEEEEEEEEEET-TEEEEEEEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccC--------CcceEEEccCCe-EEEEEecCCCceEEEEEecC-CcEEEeeeeec
Confidence 3566777765 5676543 2222221 22336665 55 666554 68999999976 4 222221
Q ss_pred eecceecCceEEEEeCCCceeeEEEEee-CCCeEEEeeCC-CCc--EEeccccc--CCcceeeeeeeeeeccceeEEEEc
Q 046773 230 HFGSVMDDGVLIDFTGCSRYWVGLYAGL-AGRAFHIWDRQ-AEE--VFVGGDLT--DHNTVMGWRMLTEFTEFVGRVRVT 303 (453)
Q Consensus 230 ~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-~D~tIrvWD~~-tg~--~~~g~~l~--~~~~v~~w~~l~~h~~~v~~v~~s 303 (453)
+... ...|+|+|||++ |++++ .|++|++||+. +|+ .+...... .+. .+.+...+.+++|+
T Consensus 84 ~~~~----p~~~a~spdg~~---l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~-------~~~~~~~~~~~~~s 149 (347)
T 3hfq_A 84 PGTP----PAYVAVDEARQL---VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPR-------PEQDGSHIHYTDLT 149 (347)
T ss_dssp ESCC----CSEEEEETTTTE---EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSS-------TTCSSCCEEEEEEC
T ss_pred CCCC----CEEEEECCCCCE---EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCC-------ccccCCCceEEEEC
Confidence 2211 224899999997 55666 78999999996 344 11100000 000 00122357789999
Q ss_pred CCceEEEEc--CCcEEEEECC-CCceEEEE--ee-ccCCeEEEEEEecCCEEEEE-eCCCccccCcceEEEEEcCC--Ce
Q 046773 304 SHESAVACT--SSRVITFDLR-NQGMVLGE--RG-YGRGLYVTSVDVNAEAYIVV-ENRELENQNRRLAIVRRVDT--FE 374 (453)
Q Consensus 304 ~~~~~vas~--d~tIrlWDl~-t~~~~~~~--~g-~~~~~~v~~~~~~g~~l~s~-s~dg~~~~~~~~i~Iw~~~t--g~ 374 (453)
|++.+.++. +++|++||+. ++...... .. .+....-.+|+|+|+.++++ ..++ .+++|+++. ++
T Consensus 150 pdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-------~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 150 PDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-------QIASLKYDTQTGA 222 (347)
T ss_dssp TTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-------EEEEEEEETTTTE
T ss_pred CCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-------EEEEEEecCCCCc
Confidence 887544443 4689999999 44432211 11 11122335788888866554 4455 899999874 54
Q ss_pred e--EEEEEecC------CCeeEEEEeeCCCeEEEE-eC-CeEEEEECCC-C--eEEEEecccCCceEE--EEecCCCEEE
Q 046773 375 E--VCRFSLRA------DRNVNVMGCMNQGYALMC-VE-GVIRVWEVEG-G--EYMYSFRERIGEEVI--AFVGDDRHVA 439 (453)
Q Consensus 375 ~--v~~l~~~~------~~v~~~~~~~~~~~lls~-s~-~tIrlWD~~t-G--~~l~tL~gh~~~~V~--a~s~d~~~la 439 (453)
. +..+...+ .....++++|++++++++ .. ++|++||+.. | +.+..+..+... +. +|+||+++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~-~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 223 FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDF-PRDFDLDPTEAFVV 301 (347)
T ss_dssp EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSC-CCEEEECTTSSEEE
T ss_pred eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCC-cCeEEECCCCCEEE
Confidence 2 33333333 236678899999988544 44 9999999973 3 566677665444 33 7899999887
Q ss_pred EE--eCCcEEEEecC
Q 046773 440 AS--CGTNIHLWDFG 452 (453)
Q Consensus 440 sg--~D~~IklWDl~ 452 (453)
++ .+++|.||++.
T Consensus 302 v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 302 VVNQNTDNATLYARD 316 (347)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEEcCCCcEEEEEEe
Confidence 66 45899999653
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=1.4e-17 Score=181.09 Aligned_cols=277 Identities=9% Similarity=-0.012 Sum_probs=168.4
Q ss_pred EEEecCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEE--EcCCeEEEEeC---------CCCEEE
Q 046773 149 CLTLSDL-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGII--ITDSQLIFATL---------DGDIHV 216 (453)
Q Consensus 149 ~lafs~~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~--f~g~~LasgS~---------D~tIkv 216 (453)
+++|+++ .++..+.|++|++||+.+|++.+.+.+|....+ .+.+++ +||+.|++++. |++|++
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSV-----NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTT-----TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccc-----ceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 4566653 444455799999999999999888765321000 133444 46889999887 789999
Q ss_pred EEeecCCcce---EEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 217 AVIDDVANET---RTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 217 Wd~~~~g~~~---~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
||+++ | .. .+. ...+ ..++|||||++ ||.++ |++|++||+.+++... ++..... -..+.++
T Consensus 95 ~d~~~-g-~~~~~~~l-~~~~----~~~~~SPDG~~---la~~~-~~~i~~~~~~~g~~~~---l~~~~~~--~~v~~g~ 158 (719)
T 1z68_A 95 YDLSN-G-EFVRGNEL-PRPI----QYLCWSPVGSK---LAYVY-QNNIYLKQRPGDPPFQ---ITFNGRE--NKIFNGI 158 (719)
T ss_dssp EETTT-T-EECCSSCC-CSSB----CCEEECSSTTC---EEEEE-TTEEEEESSTTSCCEE---CCCCCBT--TTEEESS
T ss_pred EECCC-C-ccccceec-Cccc----ccceECCCCCE---EEEEE-CCeEEEEeCCCCCcEE---EecCCCc--CCeEccc
Confidence 99987 5 11 111 1111 24899999997 56654 7899999999987321 1100000 0112344
Q ss_pred ccce---------eEEEEcCCceEE--EEcCC----------------------------------cEEEEECCCCceE-
Q 046773 294 TEFV---------GRVRVTSHESAV--ACTSS----------------------------------RVITFDLRNQGMV- 327 (453)
Q Consensus 294 ~~~v---------~~v~~s~~~~~v--as~d~----------------------------------tIrlWDl~t~~~~- 327 (453)
.++| .+++|+|++..+ ++.|. +|++||+.++++.
T Consensus 159 ~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~ 238 (719)
T 1z68_A 159 PDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVG 238 (719)
T ss_dssp CCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHC
T ss_pred ccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccc
Confidence 4443 579999987533 34331 7889999987642
Q ss_pred -EEE------eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEE----cCCCeeEEEE----EecCCCee-----
Q 046773 328 -LGE------RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRR----VDTFEEVCRF----SLRADRNV----- 387 (453)
Q Consensus 328 -~~~------~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~----~~tg~~v~~l----~~~~~~v~----- 387 (453)
..+ .+|.....-.+++|++..+++..... ++...+.+|+ .+++++...+ ..+..++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~---~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 239 PQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRV---QNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp CEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESS---TTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCC
T ss_pred eeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccc---cCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCC
Confidence 111 12322223344566654444433322 1223577778 7777654433 24455555
Q ss_pred EEEEeeCCCeEEE-EeC----CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-e-----CCcEEEEecC
Q 046773 388 NVMGCMNQGYALM-CVE----GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-C-----GTNIHLWDFG 452 (453)
Q Consensus 388 ~~~~~~~~~~lls-~s~----~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~-----D~~IklWDl~ 452 (453)
.+.++++++.++. .+. ..|.+||+.+++ +..|..+... |. .+. |++.|+.. . ++.++||.+.
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~-v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWE-AINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSC-EEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceE-EEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 6789999987654 332 578999998887 5667655544 54 345 88877654 4 4889999763
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=2e-15 Score=147.87 Aligned_cols=239 Identities=11% Similarity=0.011 Sum_probs=160.2
Q ss_pred EEEEEEc--CCeEEEEeC-------CCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEe
Q 046773 195 VSGIIIT--DSQLIFATL-------DGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIW 265 (453)
Q Consensus 195 V~~i~f~--g~~LasgS~-------D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvW 265 (453)
+..++|+ ++.|+.++. +++|.+||..+ +........+. ....++|+|||++ .+++.+.+++|.+|
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~---~~~~~~~s~dg~~--l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT-LEVTQAIHNDL---KPFGATINNTTQT--LWFGNTVNSAVTAI 116 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT-CCEEEEEEESS---CCCSEEEETTTTE--EEEEETTTTEEEEE
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC-CeEEEEEecCC---CcceEEECCCCCE--EEEEecCCCEEEEE
Confidence 3445554 567777764 56799999877 41111111111 1124899999996 24566778999999
Q ss_pred eCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEE-c-CCcEEEEECCCCceEEEEeeccCCeEEEE
Q 046773 266 DRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVAC-T-SSRVITFDLRNQGMVLGERGYGRGLYVTS 341 (453)
Q Consensus 266 D~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas-~-d~tIrlWDl~t~~~~~~~~g~~~~~~v~~ 341 (453)
|.++++...--.+.... ..-.........+.|+|++ +++++ . +++|.+||+++++.+.....+.......+
T Consensus 117 d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRK-----RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp ETTTCCEEEEEESCCCC-----CCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred eCCCCeeEEEEecCCCc-----cccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 99998843100000000 0000000125678898875 44554 2 57899999999876655432333233457
Q ss_pred EEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEec----CCCeeEEEEeeCCCeEEEEeC--CeEEEEECCCCe
Q 046773 342 VDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLR----ADRNVNVMGCMNQGYALMCVE--GVIRVWEVEGGE 415 (453)
Q Consensus 342 ~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~----~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~tG~ 415 (453)
++++++.+++++.++ .+.+||..+++.+..+... ......+.++++++++..+.. +.|.+||+++++
T Consensus 192 ~s~dg~~l~~~~~~~-------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 192 LDSEGKRLYTTNADG-------ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp EETTTTEEEEECTTS-------EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred ECCCCCEEEEEcCCC-------eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 889999999888888 9999999999988877652 233566889999998776554 899999999999
Q ss_pred EEEEecccCCceEEEEecCCCEE-EEE-eCCcEEEEecC
Q 046773 416 YMYSFRERIGEEVIAFVGDDRHV-AAS-CGTNIHLWDFG 452 (453)
Q Consensus 416 ~l~tL~gh~~~~V~a~s~d~~~l-asg-~D~~IklWDl~ 452 (453)
.+..+..+... -.+|+||+++| ++. .|++|.+||+.
T Consensus 265 ~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 265 ILAKVAAPESL-AVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp EEEEEECSSCC-CEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEEEcCCCc-eEEECCCCCEEEEEECCCCeEEEEECC
Confidence 98888754433 34789999965 555 79999999974
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=1e-16 Score=170.29 Aligned_cols=225 Identities=10% Similarity=0.030 Sum_probs=153.4
Q ss_pred EEEE--EEcCCeEEEEeC-CCCEEEEEeecCC-cceEEeee-cceecCceEEEEeCCCceeeEEEEeeC---CCeEEEee
Q 046773 195 VSGI--IITDSQLIFATL-DGDIHVAVIDDVA-NETRTAHF-GSVMDDGVLIDFTGCSRYWVGLYAGLA---GRAFHIWD 266 (453)
Q Consensus 195 V~~i--~f~g~~LasgS~-D~tIkvWd~~~~g-~~~~~~~~-~~v~~~~~~v~Fs~dg~~~~~LaSgS~---D~tIrvWD 266 (453)
|.++ ++||++||++|. |++++||++++ | ...++.+. ..+ ..++|||| +. |++++. +...+||.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~-g~~~~lt~~~~~~~----~~~~~spd-~~---l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDG-GETVKLNREPINSV----LDPHYGVG-RV---ILVRDVSKGAEQHALFK 94 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEET-TEEEECCSSCCSEE----CEECTTCS-EE---EEEEECSTTSCCEEEEE
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcC-CCcEeeeccccccc----ccccCCCC-eE---EEEeccCCCCcceEEEE
Confidence 4445 467999999988 99999999976 4 22333232 122 24789999 53 666664 56677766
Q ss_pred CCC---CcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEE-cCCcEEEEECCCCceEEEEeeccCCeEEEEE
Q 046773 267 RQA---EEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVAC-TSSRVITFDLRNQGMVLGERGYGRGLYVTSV 342 (453)
Q Consensus 267 ~~t---g~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas-~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~ 342 (453)
+.. +.... +. ...++. +.++.++++.++.++ .++.+.|||++++++......+. ...++
T Consensus 95 ~~~~~~g~~~~---l~---------~~~~~~--~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~ 157 (582)
T 3o4h_A 95 VNTSRPGEEQR---LE---------AVKPMR--ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVS 157 (582)
T ss_dssp EETTSTTCCEE---CT---------TSCSBE--EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEE
T ss_pred EeccCCCcccc---cc---------CCCCce--eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEE
Confidence 543 22111 00 011221 345556666655554 44566699999986533222222 34679
Q ss_pred EecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-C--eEEEEECCCCeEEEE
Q 046773 343 DVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-G--VIRVWEVEGGEYMYS 419 (453)
Q Consensus 343 ~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~--tIrlWD~~tG~~l~t 419 (453)
+|+|+.++.++.+.. +..++.+||+++++.. .++.+...+..+.++||+++++++.. + +|++||+++|++. .
T Consensus 158 spDG~~la~~~~~~~---~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~ 232 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGG---GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D 232 (582)
T ss_dssp EEETTEEEEEEEEET---TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E
T ss_pred CCCCCEEEEEEEcCC---CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E
Confidence 999999998877631 1127889998888754 66667777889999999999885544 6 9999999999988 7
Q ss_pred ecccCCceEE--E--------EecCCCEEEEE-eCCcEEEEec
Q 046773 420 FRERIGEEVI--A--------FVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 420 L~gh~~~~V~--a--------~s~d~~~lasg-~D~~IklWDl 451 (453)
+.+|... +. + |+|||++++++ .|++++||++
T Consensus 233 ~~~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 233 LELPSKD-FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCCSCSH-HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccCCCcC-hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8888665 44 4 89999888888 9999999986
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.73 E-value=7.9e-15 Score=142.49 Aligned_cols=257 Identities=11% Similarity=0.054 Sum_probs=154.6
Q ss_pred EEEEEecC--CEEEEEeCC-CcEEEEECC--CCe--EEEEecCCCCCccccccceEEEEEEc--CCeEEEEeC-CCCEEE
Q 046773 147 CRCLTLSD--LYLACGFAD-GAVRLFDLT--TRL--HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATL-DGDIHV 216 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D-~TIrlWD~~--tg~--~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~-D~tIkv 216 (453)
+.+++|++ ++|++++.+ ++|++||+. +++ .+.++..+. .+..++|+ ++.|+.++. |++|++
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG---------SLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS---------CCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC---------CCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 56788875 678888877 999999998 665 344554321 23346664 666766654 888999
Q ss_pred EEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEee-CCCeEEEeeCCC-CcEEecccccCCcceeeeeeeee
Q 046773 217 AVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL-AGRAFHIWDRQA-EEVFVGGDLTDHNTVMGWRMLTE 292 (453)
Q Consensus 217 Wd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-~D~tIrvWD~~t-g~~~~g~~l~~~~~v~~w~~l~~ 292 (453)
||++. + .......... .....++|+|||++ |++++ .|++|++||+.+ ++...-.. ..+..
T Consensus 111 ~d~~~-~~~~~~~~~~~~~--~~~~~~~~s~dg~~---l~~~~~~~~~v~~~d~~~~~~~~~~~~----------~~~~~ 174 (343)
T 1ri6_A 111 TRLED-GLPVGVVDVVEGL--DGCHSANISPDNRT---LWVPALKQDRICLFTVSDDGHLVAQDP----------AEVTT 174 (343)
T ss_dssp EEEET-TEEEEEEEEECCC--TTBCCCEECTTSSE---EEEEEGGGTEEEEEEECTTSCEEEEEE----------EEEEC
T ss_pred EECCC-CccccccccccCC--CCceEEEECCCCCE---EEEecCCCCEEEEEEecCCCceeeecc----------ccccc
Confidence 99952 3 1111111110 11124789999996 44555 899999999988 65211000 00111
Q ss_pred -eccceeEEEEcCCce--EEEE-cCCcEEEEECCC--CceE--EEEe----eccC--CeEEEEEEecCCEEEEE-eCCCc
Q 046773 293 -FTEFVGRVRVTSHES--AVAC-TSSRVITFDLRN--QGMV--LGER----GYGR--GLYVTSVDVNAEAYIVV-ENREL 357 (453)
Q Consensus 293 -h~~~v~~v~~s~~~~--~vas-~d~tIrlWDl~t--~~~~--~~~~----g~~~--~~~v~~~~~~g~~l~s~-s~dg~ 357 (453)
....+..++|+|++. ++++ .+++|++||+.. +... .... ++.. .....+|+++++.++.+ +.++
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~- 253 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS- 253 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT-
T ss_pred CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC-
Confidence 123567799998874 3445 457899999953 4321 1111 1111 12235677778777644 4566
Q ss_pred cccCcceEEEEEcC--CC--eeEEEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEE--ECCCCeE--EEEecccCCce
Q 046773 358 ENQNRRLAIVRRVD--TF--EEVCRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVW--EVEGGEY--MYSFRERIGEE 427 (453)
Q Consensus 358 ~~~~~~~i~Iw~~~--tg--~~v~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlW--D~~tG~~--l~tL~gh~~~~ 427 (453)
.+++|+++ ++ +.+..+..... +..+.++++++++++++. ++|+|| |.++|+. +..+.......
T Consensus 254 ------~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~ 326 (343)
T 1ri6_A 254 ------LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPM 326 (343)
T ss_dssp ------EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCC
T ss_pred ------EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCe
Confidence 99999998 33 34444444333 778899999998887763 999999 6667743 44454332331
Q ss_pred EEEEecCCC
Q 046773 428 VIAFVGDDR 436 (453)
Q Consensus 428 V~a~s~d~~ 436 (453)
-.+|.|+.+
T Consensus 327 ~i~~~~~~~ 335 (343)
T 1ri6_A 327 WVVVNAHEG 335 (343)
T ss_dssp EEEEEEEC-
T ss_pred eEEEEcccC
Confidence 125555443
No 150
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=4.8e-16 Score=170.74 Aligned_cols=270 Identities=9% Similarity=-0.021 Sum_probs=168.1
Q ss_pred EEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceE--EEEEEcCCeEEEEeCCC---------CE
Q 046773 148 RCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAV--SGIIITDSQLIFATLDG---------DI 214 (453)
Q Consensus 148 ~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V--~~i~f~g~~LasgS~D~---------tI 214 (453)
.+++|++ .+|+++ |++|++||+.||++...|.+|....+. ... -++++||+.|++++.|. .+
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFG---HSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCC---SCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhc---ccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 3678875 478886 999999999999999888876532221 122 23456788999998874 45
Q ss_pred EEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee
Q 046773 215 HVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF 293 (453)
Q Consensus 215 kvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h 293 (453)
.+||+.+ | ...+..+.+.+ ..++|||||++ ||.+ .|++|.|||+.+++... ++..... -..+.++
T Consensus 95 ~~~d~~~-~~~~~l~~~~~~~----~~~~~SPdG~~---la~~-~~~~i~~~~~~~~~~~~---lt~~g~~--~~~~~g~ 160 (740)
T 4a5s_A 95 DIYDLNK-RQLITEERIPNNT----QWVTWSPVGHK---LAYV-WNNDIYVKIEPNLPSYR---ITWTGKE--DIIYNGI 160 (740)
T ss_dssp EEEETTT-TEECCSSCCCTTE----EEEEECSSTTC---EEEE-ETTEEEEESSTTSCCEE---CCSCCBT--TTEEESB
T ss_pred EEEECCC-CcEEEcccCCCcc----eeeEECCCCCE---EEEE-ECCeEEEEECCCCceEE---EcCCCCc--cceecCc
Confidence 6999987 5 33333343332 24899999997 5555 47899999999987321 1100000 0123344
Q ss_pred cccee---------EEEEcCCceEEE--EcC-C-----------------------------------cEEEEECCC---
Q 046773 294 TEFVG---------RVRVTSHESAVA--CTS-S-----------------------------------RVITFDLRN--- 323 (453)
Q Consensus 294 ~~~v~---------~v~~s~~~~~va--s~d-~-----------------------------------tIrlWDl~t--- 323 (453)
.++|. .+.+||++..++ +.| . +|+|||+++
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCS
T ss_pred ccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCC
Confidence 44443 488999885443 222 1 588899998
Q ss_pred Cc--eEEEEe------eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe----eEE--EE--EecCCCee
Q 046773 324 QG--MVLGER------GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE----EVC--RF--SLRADRNV 387 (453)
Q Consensus 324 ~~--~~~~~~------g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~----~v~--~l--~~~~~~v~ 387 (453)
++ ...++. ++...+.-.+++|+|+.++...... +++.+|.+||+++++ |.. .+ ..+..++.
T Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~---~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~ 317 (740)
T 4a5s_A 241 VTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRI---QNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVG 317 (740)
T ss_dssp SSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS---TTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSS
T ss_pred CCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC---CCEEEEEEEECCCCccccceeEEEEeeeccCCceEc
Confidence 73 222331 1322233345778887665554433 344578999999987 322 22 23444444
Q ss_pred -----EEEEeeCCCeEE-EEeC----CeEEEEECCCCeEEEEecccCCceEE-EEecCCCEEE-EE
Q 046773 388 -----NVMGCMNQGYAL-MCVE----GVIRVWEVEGGEYMYSFRERIGEEVI-AFVGDDRHVA-AS 441 (453)
Q Consensus 388 -----~~~~~~~~~~ll-s~s~----~tIrlWD~~tG~~l~tL~gh~~~~V~-a~s~d~~~la-sg 441 (453)
...|+||++.++ ..+. ..|.+||+.++++.....| .-. |. .+.+|++.|+ ++
T Consensus 318 ~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~-v~~~~~~d~~~i~f~~ 381 (740)
T 4a5s_A 318 RFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWE-VIGIEALTSDYLYYIS 381 (740)
T ss_dssp SSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSC-EEEEEEECSSEEEEEE
T ss_pred cCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC-CEE-EEEEEEEeCCEEEEEE
Confidence 678999999877 5553 6899999998876654444 223 44 3457787765 44
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1.1e-15 Score=144.52 Aligned_cols=227 Identities=8% Similarity=-0.010 Sum_probs=152.0
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCC-CeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEe--CCCCEEEEEe
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTT-RLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFAT--LDGDIHVAVI 219 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~t-g~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS--~D~tIkvWd~ 219 (453)
+.+++|++ ++||+++ |+.|++||+.+ +++.+.+.+++.. .+.+++| +++.|++++ .|+.++||.+
T Consensus 44 v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATI-------CNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCC-------BCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccc-------cccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 67899986 6899887 88999999999 9888777665321 2334555 577899998 4567888887
Q ss_pred ecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCC--CCcEEecccccCCcceeeeeeeeeecc
Q 046773 220 DDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQ--AEEVFVGGDLTDHNTVMGWRMLTEFTE 295 (453)
Q Consensus 220 ~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~--tg~~~~g~~l~~~~~v~~w~~l~~h~~ 295 (453)
+..+ ...+..+. . ...++|+|||+++ +++++.|++++||++. +++.. .+..+..
T Consensus 116 ~~~~~~~~~~~~~~-~----~~~~~~spdg~~l--~~~~~~~~~~~l~~~~~~~~~~~---------------~~~~~~~ 173 (297)
T 2ojh_A 116 PSTGGTPRLMTKNL-P----SYWHGWSPDGKSF--TYCGIRDQVFDIYSMDIDSGVET---------------RLTHGEG 173 (297)
T ss_dssp ETTCCCCEECCSSS-S----EEEEEECTTSSEE--EEEEEETTEEEEEEEETTTCCEE---------------ECCCSSS
T ss_pred ECCCCceEEeecCC-C----ccceEECCCCCEE--EEEECCCCceEEEEEECCCCcce---------------EcccCCC
Confidence 6422 12221111 1 1247999999972 4578899999999954 44421 2345567
Q ss_pred ceeEEEEcCCce--EEEEc-CCcEEEEECC-CCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCcccc----CcceEEE
Q 046773 296 FVGRVRVTSHES--AVACT-SSRVITFDLR-NQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQ----NRRLAIV 367 (453)
Q Consensus 296 ~v~~v~~s~~~~--~vas~-d~tIrlWDl~-t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~----~~~~i~I 367 (453)
.+.++.++|++. ++++. ++.++||++. .++.+..+..+.......+++++++.++.++.++.... .+..+.+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 788999998874 33443 6789999986 44455444444433344567788888888877631000 1236889
Q ss_pred EEcCCCee--EEEEEecCCCeeEEEEeeCCCeEEEEeC
Q 046773 368 RRVDTFEE--VCRFSLRADRNVNVMGCMNQGYALMCVE 403 (453)
Q Consensus 368 w~~~tg~~--v~~l~~~~~~v~~~~~~~~~~~lls~s~ 403 (453)
|+.++++. +..+..+...+..+.++|++.++++++.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 99988765 3344456666788889999998887654
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=2.2e-15 Score=146.91 Aligned_cols=221 Identities=11% Similarity=0.055 Sum_probs=148.8
Q ss_pred eEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcE-EecccccCCc
Q 046773 204 QLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEV-FVGGDLTDHN 282 (453)
Q Consensus 204 ~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~-~~g~~l~~~~ 282 (453)
.+++++.|++|++||.++ +........+. ....++|+|||+++ ++++..+++|.+||+++++. .
T Consensus 12 ~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~---~~~~~~~s~dg~~l--~~~~~~~~~i~~~d~~~~~~~~--------- 76 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDT-LEILNQITLGY---DFVDTAITSDCSNV--VVTSDFCQTLVQIETQLEPPKV--------- 76 (331)
T ss_dssp EEEEEGGGTEEEEEETTT-CCEEEEEECCC---CEEEEEECSSSCEE--EEEESTTCEEEEEECSSSSCEE---------
T ss_pred EEEEecCCCeEEEEeCcc-cceeeeEEccC---CcceEEEcCCCCEE--EEEeCCCCeEEEEECCCCceeE---------
Confidence 477889999999999987 51111111111 11158999999962 34445589999999999874 2
Q ss_pred ceeeeeeeeeeccceeEEEEcCCceEE-EEcCC----cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe-CCC
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHESAV-ACTSS----RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE-NRE 356 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~~~v-as~d~----tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s-~dg 356 (453)
..+..+..+..+++|+|++..+ ++.+. +|++||+++++++..... .....-.+++|+|+.+++++ .++
T Consensus 77 -----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 77 -----VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp -----EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTT
T ss_pred -----EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCC
Confidence 2334455565558999887533 33333 899999999876655432 22334567888887665554 445
Q ss_pred ccccCcce-EEEEEcCCCeeEE----EEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEEECCCCeE---EEEecccCCc
Q 046773 357 LENQNRRL-AIVRRVDTFEEVC----RFSLRADRNVNVMGCMNQGYALMCVE--GVIRVWEVEGGEY---MYSFRERIGE 426 (453)
Q Consensus 357 ~~~~~~~~-i~Iw~~~tg~~v~----~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~tG~~---l~tL~gh~~~ 426 (453)
. +.+|+++....+. ...........+.+++++++++.+.. ++|++||+++++. +.++..+...
T Consensus 151 -------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~ 223 (331)
T 3u4y_A 151 -------NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLP 223 (331)
T ss_dssp -------TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCC
T ss_pred -------ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCC
Confidence 6 9999988643331 11122344778899999987766553 8999999999998 8888755333
Q ss_pred eEEEEecCCCEEEEE--eCCcEEEEecC
Q 046773 427 EVIAFVGDDRHVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 427 ~V~a~s~d~~~lasg--~D~~IklWDl~ 452 (453)
.-.+|+||+++|+.+ .++.|.+||+.
T Consensus 224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 224 GTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp CCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred ceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 112789999977544 67899999974
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.72 E-value=2.1e-16 Score=171.28 Aligned_cols=273 Identities=7% Similarity=-0.049 Sum_probs=163.7
Q ss_pred EEEEEecC--CEEEEEeCC---------CcEEEEECCCCeEEEEecCCCCCccccccceEEE--EEEcCCeEEEEeCCCC
Q 046773 147 CRCLTLSD--LYLACGFAD---------GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSG--IIITDSQLIFATLDGD 213 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D---------~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~--i~f~g~~LasgS~D~t 213 (453)
|.+++||+ ++||+++.| ++|+|||+.++++ +.|..+..+ ...+.. +++||+.||+++. ++
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~-----~~~~~~~~~SPdG~~la~~~~-~~ 135 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVS-----NAKLQYAGWGPKGQQLIFIFE-NN 135 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCC-----SCCCSBCCBCSSTTCEEEEET-TE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccc-----cccccccEECCCCCEEEEEEC-Ce
Confidence 57888886 689999875 6788999999987 455432211 001222 4456889999886 78
Q ss_pred EEEEEeecCC-cceEE-eeecceec--------------CceEEEEeCCCceeeEEEEeeCCC-----------------
Q 046773 214 IHVAVIDDVA-NETRT-AHFGSVMD--------------DGVLIDFTGCSRYWVGLYAGLAGR----------------- 260 (453)
Q Consensus 214 IkvWd~~~~g-~~~~~-~~~~~v~~--------------~~~~v~Fs~dg~~~~~LaSgS~D~----------------- 260 (453)
|++||+.+ | ...+. .+...+.. ....++|||||++ |++++.|.
T Consensus 136 i~~~~~~~-g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~---la~~~~~~~~~~~~~~~~~~~~~~~ 211 (723)
T 1xfd_A 136 IYYCAHVG-KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR---LAYAAINDSRVPIMELPTYTGSIYP 211 (723)
T ss_dssp EEEESSSS-SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE---EEEEEEECTTSCEEEECCCSSSSSC
T ss_pred EEEEECCC-CceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE---EEEEEECCCccceEEeeccCCcCCC
Confidence 99999987 4 22221 11211100 1135899999997 55665442
Q ss_pred -----------------eEEEeeCCCCcE-EecccccCCcceeeeeeeeeeccceeEEEEcCCceEEE--EcC----CcE
Q 046773 261 -----------------AFHIWDRQAEEV-FVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVA--CTS----SRV 316 (453)
Q Consensus 261 -----------------tIrvWD~~tg~~-~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~va--s~d----~tI 316 (453)
+|++||+.+++. .. +..+ ..+..+...+.+++|+|++..++ +.. ..|
T Consensus 212 ~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~---l~~~------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 212 TVKPYHYPKAGSENPSISLHVIGLNGPTHDLE---MMPP------DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp CCEEEECCBTTSCCCEEEEEEEESSSSCCCEE---CCCC------CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred cceeccCCCCCCCCCeeEEEEEECCCCceeEE---eeCC------ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 799999988862 11 1100 01112346788899999986543 222 469
Q ss_pred EEEECCCCceEEEEeec-cCCe----EEEEEEecCCEEEEEeCCCccccCcceEEEEEcC--CCee---EEEEEecCCCe
Q 046773 317 ITFDLRNQGMVLGERGY-GRGL----YVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD--TFEE---VCRFSLRADRN 386 (453)
Q Consensus 317 rlWDl~t~~~~~~~~g~-~~~~----~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~--tg~~---v~~l~~~~~~v 386 (453)
++||+.++++......+ .... .-.+|+|+|+.++.++.+.... .....+||.++ ++.. ...++.....+
T Consensus 283 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~-~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 361 (723)
T 1xfd_A 283 TLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG-RGKFYHITVSSSQPNSSNDNIQSITSGDWDV 361 (723)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS-SSCEEEEEEECSSCCSSSCCCCBSCCSSSCE
T ss_pred EEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC-CcceeEEEEEeccCCCCccceeEeecCCeEE
Confidence 99999998865443222 1111 1357889999887653222000 01134454443 3322 44444322234
Q ss_pred eE-EEEeeCCCeEEEEeC----CeEEEEECCCC--eEEEEecc---cCCceEE--EEecCCCEEEEE
Q 046773 387 VN-VMGCMNQGYALMCVE----GVIRVWEVEGG--EYMYSFRE---RIGEEVI--AFVGDDRHVAAS 441 (453)
Q Consensus 387 ~~-~~~~~~~~~lls~s~----~tIrlWD~~tG--~~l~tL~g---h~~~~V~--a~s~d~~~lasg 441 (453)
.. +.+++++++++..+. ++++||++... .....|.+ |... +. +|+||+++|+..
T Consensus 362 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 362 TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCT-YFSASFSHSMDFFLLK 427 (723)
T ss_dssp EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCC-CCEEEECTTSSEEEEE
T ss_pred EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCC-eEEEEECCCCCEEEEE
Confidence 44 578999999875543 68999998753 24555654 4444 43 789999988754
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.69 E-value=6.3e-15 Score=142.82 Aligned_cols=240 Identities=11% Similarity=0.058 Sum_probs=154.1
Q ss_pred EEEEEecC--CE-EEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEe------------
Q 046773 147 CRCLTLSD--LY-LACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFAT------------ 209 (453)
Q Consensus 147 v~~lafs~--~~-LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS------------ 209 (453)
+.+++|++ ++ +++++.+++|.+||+.+++.++++...+.. .+...+.+++| +++.|++++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE---ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT---EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc---cccccccceEECCCCCEEEEEecccccccccccc
Confidence 35677875 44 567778899999999999998887632100 00001223555 467788876
Q ss_pred CCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeee
Q 046773 210 LDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRM 289 (453)
Q Consensus 210 ~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~ 289 (453)
.|+.|.+||+.+ +........+. ....++|+|||++ |+++ ++.|.+||+++++...-
T Consensus 113 ~~~~i~v~d~~~-~~~~~~~~~~~---~~~~~~~s~dg~~---l~~~--~~~i~~~d~~~~~~~~~-------------- 169 (337)
T 1pby_B 113 QPTRVALYDAET-LSRRKAFEAPR---QITMLAWARDGSK---LYGL--GRDLHVMDPEAGTLVED-------------- 169 (337)
T ss_dssp CCCEEEEEETTT-TEEEEEEECCS---SCCCEEECTTSSC---EEEE--SSSEEEEETTTTEEEEE--------------
T ss_pred cCceEEEEECCC-CcEEEEEeCCC---CcceeEECCCCCE---EEEe--CCeEEEEECCCCcEeee--------------
Confidence 679999999976 41111111111 1123789999997 4554 68899999999884310
Q ss_pred eeeeccceeEEEEcCCce--EEEEcC-C-----------------------cEEEEECCCCceEEE-EeeccCCeEEEEE
Q 046773 290 LTEFTEFVGRVRVTSHES--AVACTS-S-----------------------RVITFDLRNQGMVLG-ERGYGRGLYVTSV 342 (453)
Q Consensus 290 l~~h~~~v~~v~~s~~~~--~vas~d-~-----------------------tIrlWDl~t~~~~~~-~~g~~~~~~v~~~ 342 (453)
+..+. +...+.++|++. ++++.. + .|.+||++++++... ...+.....-.++
T Consensus 170 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 170 KPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp ECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred eeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEE
Confidence 00000 000112333332 111111 1 579999999876422 2233333334667
Q ss_pred EecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEec
Q 046773 343 DVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 343 ~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~ 421 (453)
+++++.++++ ++ .+.+||..+++.+..+... ..+..+.++++++++++++. ++|++||+++++.+..++
T Consensus 249 s~dg~~l~~~--~~-------~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 249 NPAKTRAFGA--YN-------VLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp CTTSSEEEEE--ES-------EEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEe--CC-------eEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 8888887776 56 9999999999888777643 44678899999998887765 999999999999998886
Q ss_pred cc
Q 046773 422 ER 423 (453)
Q Consensus 422 gh 423 (453)
.+
T Consensus 319 ~~ 320 (337)
T 1pby_B 319 LP 320 (337)
T ss_dssp CG
T ss_pred cC
Confidence 54
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.69 E-value=2.6e-15 Score=146.50 Aligned_cols=220 Identities=7% Similarity=-0.037 Sum_probs=146.3
Q ss_pred cCCeEEEEeCCCCEEEEEeecCC--cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccc
Q 046773 201 TDSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDL 278 (453)
Q Consensus 201 ~g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l 278 (453)
++..+++++.|++|++||..+ + ...+..+.. .....++|+|||+. .+++++.+++|.+||+++++...
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~---~~~~~~~~s~dg~~--~~v~~~~~~~i~~~d~~t~~~~~---- 79 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVAS-DTVYKSCVMPDK---FGPGTAMMAPDNRT--AYVLNNHYGDIYGIDLDTCKNTF---- 79 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTT-TEEEEEEECSSC---CSSCEEEECTTSSE--EEEEETTTTEEEEEETTTTEEEE----
T ss_pred CCEEEEEeCCCCeEEEEECCC-CcEEEEEecCCC---CCCceeEECCCCCE--EEEEeCCCCcEEEEeCCCCcEEE----
Confidence 355788999999999999987 4 122222110 01235899999986 24566788999999999988431
Q ss_pred cCCcceeeeeeee-ee-----ccceeEEEEcCCc--eEEEEcC------------CcEEEEECCCCceE---EEEeeccC
Q 046773 279 TDHNTVMGWRMLT-EF-----TEFVGRVRVTSHE--SAVACTS------------SRVITFDLRNQGMV---LGERGYGR 335 (453)
Q Consensus 279 ~~~~~v~~w~~l~-~h-----~~~v~~v~~s~~~--~~vas~d------------~tIrlWDl~t~~~~---~~~~g~~~ 335 (453)
.+. .+ ...+..++|+|++ +++++.+ ++|.+||+++++.. ..... ..
T Consensus 80 ----------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~ 148 (349)
T 1jmx_B 80 ----------HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PR 148 (349)
T ss_dssp ----------EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CS
T ss_pred ----------EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CC
Confidence 011 11 1236778999876 3444433 78999999985432 22222 22
Q ss_pred CeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC--------------------------------
Q 046773 336 GLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA-------------------------------- 383 (453)
Q Consensus 336 ~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~-------------------------------- 383 (453)
.....+++++++ ++++ ++ .+.+||..+++.+..+....
T Consensus 149 ~~~~~~~s~dg~-l~~~--~~-------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T 1jmx_B 149 QVYLMRAADDGS-LYVA--GP-------DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR 218 (349)
T ss_dssp SCCCEEECTTSC-EEEE--SS-------SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred cccceeECCCCc-EEEc--cC-------cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee
Confidence 233355788888 5443 44 68999999888776654331
Q ss_pred ------------------------------------CCeeEEEEee-CCCeEEEEeCCeEEEEECCCCeEEEEecccCCc
Q 046773 384 ------------------------------------DRNVNVMGCM-NQGYALMCVEGVIRVWEVEGGEYMYSFRERIGE 426 (453)
Q Consensus 384 ------------------------------------~~v~~~~~~~-~~~~lls~s~~tIrlWD~~tG~~l~tL~gh~~~ 426 (453)
.....+.+++ ++++++++ ++.|.+||+++++.+.++......
T Consensus 219 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~ 297 (349)
T 1jmx_B 219 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTY 297 (349)
T ss_dssp C-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCC
T ss_pred cCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCCc
Confidence 0122344557 78887766 889999999999998888643332
Q ss_pred eEEEEecCCCEEEEE-eCCcEEEEecC
Q 046773 427 EVIAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 427 ~V~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.-.+|+||+++|+++ .|++|++||+.
T Consensus 298 ~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 298 YCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp CEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred cceEECCCCCEEEEecCCCeEEEEecc
Confidence 123789999988778 88999999974
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.69 E-value=2.6e-14 Score=140.88 Aligned_cols=241 Identities=11% Similarity=0.052 Sum_probs=149.2
Q ss_pred EEEEEecCC-EEEEEeC---CCcEEEEECCCCeE--EEEecCCCCCccccccceEEEEEE--cCCeEEEEe-CCCCEEEE
Q 046773 147 CRCLTLSDL-YLACGFA---DGAVRLFDLTTRLH--VRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFAT-LDGDIHVA 217 (453)
Q Consensus 147 v~~lafs~~-~LaSGS~---D~TIrlWD~~tg~~--~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS-~D~tIkvW 217 (453)
+..++|+++ .|++++. |++|++||+.+++. +.++..+.. .+..++| +|+.|++++ .+++|++|
T Consensus 42 p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~--------~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 42 PTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGT--------PPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp CCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESC--------CCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCC--------CCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 356888763 2555544 69999999988873 344332221 2334554 577888887 68899999
Q ss_pred EeecCC-cceEEeee--cce------ecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCC-CCcEEecccccCCcceeee
Q 046773 218 VIDDVA-NETRTAHF--GSV------MDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQ-AEEVFVGGDLTDHNTVMGW 287 (453)
Q Consensus 218 d~~~~g-~~~~~~~~--~~v------~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~-tg~~~~g~~l~~~~~v~~w 287 (453)
+++..| ...+.... +.- ......++|+|||+. +++...+++|++||+. +|+...-
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l---~v~~~~~~~v~~~~~~~~g~~~~~------------ 178 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRL---AVIDLGSDKVYVYNVSDAGQLSEQ------------ 178 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCE---EEEETTTTEEEEEEECTTSCEEEE------------
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcE---EEEeCCCCEEEEEEECCCCcEEEe------------
Confidence 997434 22222111 100 001124899999993 5677788999999998 5652110
Q ss_pred eeeeee-ccceeEEEEcCCce--EEEEc-CCcEEEEECCC--CceEE--EEeecc------CCeEEEEEEecCCEE-EEE
Q 046773 288 RMLTEF-TEFVGRVRVTSHES--AVACT-SSRVITFDLRN--QGMVL--GERGYG------RGLYVTSVDVNAEAY-IVV 352 (453)
Q Consensus 288 ~~l~~h-~~~v~~v~~s~~~~--~vas~-d~tIrlWDl~t--~~~~~--~~~g~~------~~~~v~~~~~~g~~l-~s~ 352 (453)
..+... ......++|+|++. ++++. +++|++||+.. ++... ...... ....-.+|+++|+.+ ++.
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 001111 12456789999874 34343 47899999874 43211 111111 112335577888876 444
Q ss_pred eCCCccccCcceEEEEEcCC-C--eeEEEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEE--ECCCCeEE
Q 046773 353 ENRELENQNRRLAIVRRVDT-F--EEVCRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVW--EVEGGEYM 417 (453)
Q Consensus 353 s~dg~~~~~~~~i~Iw~~~t-g--~~v~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlW--D~~tG~~l 417 (453)
..++ .++||+++. + +.+..+..+......++++|++++++++.. ++|+|| |.++|+..
T Consensus 259 ~~~~-------~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 259 RGYN-------TLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ETTT-------EEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCC-------EEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 5567 999999873 2 455555554555788999999998887654 899999 66778764
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=6.1e-15 Score=147.05 Aligned_cols=274 Identities=13% Similarity=0.054 Sum_probs=167.7
Q ss_pred EEecC--CEEEEEeC-CCc--EEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCC-
Q 046773 150 LTLSD--LYLACGFA-DGA--VRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVA- 223 (453)
Q Consensus 150 lafs~--~~LaSGS~-D~T--IrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g- 223 (453)
.+||+ ++||..+. |++ |.+||+.++++.+...++....++ ..++++|+.|++++.+++|++||+.+ +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~------~~~spdg~~l~~~~~~~~l~~~d~~~-g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFG------GFLSPDDDALFYVKDGRNLMRVDLAT-LE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSS------CEECTTSSEEEEEETTTEEEEEETTT-CC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccc------eEEcCCCCEEEEEeCCCeEEEEECCC-Cc
Confidence 66764 68998887 664 888999999987766554321111 12556788999999999999999987 5
Q ss_pred cc-eEEeeecceecCceEEEEeCCCceeeEEE-------------------EeeCCCeEEEeeCCCCcEEecccccCCcc
Q 046773 224 NE-TRTAHFGSVMDDGVLIDFTGCSRYWVGLY-------------------AGLAGRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 224 ~~-~~~~~~~~v~~~~~~v~Fs~dg~~~~~La-------------------SgS~D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
.. ....+.+.+. .....++|||+.++.+. +.+.+..|.+||+++++..
T Consensus 114 ~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~---------- 181 (388)
T 3pe7_A 114 ENVVYQVPAEWVG--YGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST---------- 181 (388)
T ss_dssp EEEEEECCTTEEE--EEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE----------
T ss_pred ceeeeechhhccc--ccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE----------
Confidence 11 2222222111 01134589998643211 1234578999999998732
Q ss_pred eeeeeeeeeeccceeEEEEcC-CceEE--EEcC------CcEEEEECCCCceEEEEeeccC--CeEEEEEEecCCEEEEE
Q 046773 284 VMGWRMLTEFTEFVGRVRVTS-HESAV--ACTS------SRVITFDLRNQGMVLGERGYGR--GLYVTSVDVNAEAYIVV 352 (453)
Q Consensus 284 v~~w~~l~~h~~~v~~v~~s~-~~~~v--as~d------~tIrlWDl~t~~~~~~~~g~~~--~~~v~~~~~~g~~l~s~ 352 (453)
.+..+...+..++|+| ++..+ .+.+ ..|.++|+.++.. ..+..+.. .....+++|+|+.++..
T Consensus 182 -----~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 182 -----VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp -----EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred -----EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEE
Confidence 2334556788899999 77433 2332 2678888876532 33322221 12234688888888666
Q ss_pred eCCCccccCcceEEEEEcCCCeeEEEEEecCC-----CeeEEEEeeCCCeEEEE---------eC-CeEEEEECCCCeEE
Q 046773 353 ENRELENQNRRLAIVRRVDTFEEVCRFSLRAD-----RNVNVMGCMNQGYALMC---------VE-GVIRVWEVEGGEYM 417 (453)
Q Consensus 353 s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~-----~v~~~~~~~~~~~lls~---------s~-~tIrlWD~~tG~~l 417 (453)
+.... .....+.+||+++++......+... ......++|++++++.. .. ..|.+||+++++.
T Consensus 256 ~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~- 332 (388)
T 3pe7_A 256 SYLKG--SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ- 332 (388)
T ss_dssp EEETT--CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-
T ss_pred ecCCC--CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-
Confidence 54320 1112488999998874322221110 01123688898887743 23 7999999999875
Q ss_pred EEecccCC-----------ceEE--EEecCCCEEEEE--eCCcEEEEecC
Q 046773 418 YSFRERIG-----------EEVI--AFVGDDRHVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 418 ~tL~gh~~-----------~~V~--a~s~d~~~lasg--~D~~IklWDl~ 452 (453)
..|..|.. . +. +|+|||++|+.. .++...||.+.
T Consensus 333 ~~l~~~~~~~~~~~~~~~~~-~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 333 HRVARHDTSWKVFEGDRQVT-HPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp EEEEECCCCCCCBTTBSSTT-CCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEeccccCcccccccccccC-CCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 45655554 2 33 889999988754 67888888653
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=4.1e-14 Score=141.75 Aligned_cols=266 Identities=12% Similarity=0.029 Sum_probs=160.2
Q ss_pred EEEEEeCC--CcEEEEE--CCCCeEEE--Eec-CCCCCccccccceEEEEEE--cCCeEEEEeCCCCEEEEEee-cCC-c
Q 046773 156 YLACGFAD--GAVRLFD--LTTRLHVR--TFR-PQHSDRLGQFSRAVSGIII--TDSQLIFATLDGDIHVAVID-DVA-N 224 (453)
Q Consensus 156 ~LaSGS~D--~TIrlWD--~~tg~~~~--tl~-gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~tIkvWd~~-~~g-~ 224 (453)
+|..|++. +.|.+|+ .++|+... ... +... .+..++| +++.|++++.+ +|.+|+++ + | .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~--------~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~-g~~ 73 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDE--------PISWMTFDHERKNIYGAAMK-KWSSFAVKSP-TEI 73 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTC--------CCSEEEECTTSSEEEEEEBT-EEEEEEEEET-TEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCC--------CCcEEEECCCCCEEEEEccc-eEEEEEECCC-CCE
Confidence 35556664 5677765 46776432 111 1110 1234555 57789888888 99999997 5 5 1
Q ss_pred ceEEeeecceecCceEEEEeCCCceeeEEEEee-------------CCCeEEEeeCC-CCcEEecccccCCcceeeeeee
Q 046773 225 ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL-------------AGRAFHIWDRQ-AEEVFVGGDLTDHNTVMGWRML 290 (453)
Q Consensus 225 ~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-------------~D~tIrvWD~~-tg~~~~g~~l~~~~~v~~w~~l 290 (453)
.....+... .....++|+|||+++. |++++ .|+++++|++. +|+... .+ ..+
T Consensus 74 ~~~~~~~~~--g~~~~~~~spdg~~l~-~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~--------~~---~~~ 139 (365)
T 1jof_A 74 VHEASHPIG--GHPRANDADTNTRAIF-LLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEK--------NV---QNY 139 (365)
T ss_dssp EEEEEEECC--SSGGGGCTTSCCEEEE-EEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEE--------EE---EEE
T ss_pred EEeeEeecC--CCCccEEECCCCCEEE-EEEecCCcceeccceeecCCceEEEEccCCCCcCcc--------eE---eeE
Confidence 111122100 0112378999999521 44543 68999999997 465321 00 001
Q ss_pred -eeeccceeEEEEcCCce--EEEEc-CCcEEEEECC-CCceEEE--Eee--ccCCeEEEEEEecCCEEEEEeC-CCcccc
Q 046773 291 -TEFTEFVGRVRVTSHES--AVACT-SSRVITFDLR-NQGMVLG--ERG--YGRGLYVTSVDVNAEAYIVVEN-RELENQ 360 (453)
Q Consensus 291 -~~h~~~v~~v~~s~~~~--~vas~-d~tIrlWDl~-t~~~~~~--~~g--~~~~~~v~~~~~~g~~l~s~s~-dg~~~~ 360 (453)
..+...+.+++|+|++. ++++. +++|++||+. +++.... ... ++....-.+|+|+|+.+++++. ++
T Consensus 140 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---- 215 (365)
T 1jof_A 140 EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN---- 215 (365)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT----
T ss_pred EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC----
Confidence 02345678899999874 33332 4689999998 7764322 121 2333334567888888877664 55
Q ss_pred CcceEEEEEcC--CCeeE---EEEEecC------C-------CeeEEE-EeeCCCeEEEEeC--C-----eEEEEECC-C
Q 046773 361 NRRLAIVRRVD--TFEEV---CRFSLRA------D-------RNVNVM-GCMNQGYALMCVE--G-----VIRVWEVE-G 413 (453)
Q Consensus 361 ~~~~i~Iw~~~--tg~~v---~~l~~~~------~-------~v~~~~-~~~~~~~lls~s~--~-----tIrlWD~~-t 413 (453)
++++|+++ +++.. ..+..-+ . .+..++ ++|++++++++.. + +|++||+. +
T Consensus 216 ---~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~ 292 (365)
T 1jof_A 216 ---RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC 292 (365)
T ss_dssp ---EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT
T ss_pred ---eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC
Confidence 89999876 56542 2232211 1 366788 8999998876543 4 89999996 7
Q ss_pred CeEEEE---ecccCCc-eEEEEec---CCCEEEEE-e-CCcEEEEecC
Q 046773 414 GEYMYS---FRERIGE-EVIAFVG---DDRHVAAS-C-GTNIHLWDFG 452 (453)
Q Consensus 414 G~~l~t---L~gh~~~-~V~a~s~---d~~~lasg-~-D~~IklWDl~ 452 (453)
|+.... +..+... .-.+|+| ||++|+++ . +++|+||++.
T Consensus 293 g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 293 GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 775432 3223222 0127899 89999887 5 5899999874
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=1e-13 Score=137.62 Aligned_cols=249 Identities=14% Similarity=0.041 Sum_probs=153.0
Q ss_pred EEEEEecC--CEEEEEeCC----CcEEEEECCC--CeE--EEEecCCCCCccccccceEEEEEEcCCeEEEEe-CCCCEE
Q 046773 147 CRCLTLSD--LYLACGFAD----GAVRLFDLTT--RLH--VRTFRPQHSDRLGQFSRAVSGIIITDSQLIFAT-LDGDIH 215 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D----~TIrlWD~~t--g~~--~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS-~D~tIk 215 (453)
+..++|++ ++|++++.| ++|++|++.. |+. +.++..+.. ....++++++.|+.++ .+++|.
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~--------~p~~~~~dg~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA--------DPCYLTTNGKNIVTANYSGGSIT 123 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS--------CEEEEEECSSEEEEEETTTTEEE
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC--------CcEEEEECCCEEEEEECCCCEEE
Confidence 35678875 689998886 7999999865 553 223321111 3445777888887776 578999
Q ss_pred EEEeecCC-cceE---Eeeeccee-------cCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcE------Eecccc
Q 046773 216 VAVIDDVA-NETR---TAHFGSVM-------DDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEV------FVGGDL 278 (453)
Q Consensus 216 vWd~~~~g-~~~~---~~~~~~v~-------~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~------~~g~~l 278 (453)
+|++...+ +... ..+.+.-. .....++|+|||+++ +++...+++|++|++..... +...
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l--~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~-- 199 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL--LADDLGTDQIHKFNINPNANADNKEKFLTK-- 199 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE--EEEETTTTEEEEEEECTTCCTTTCCCCEEE--
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE--EEEeCCCCEEEEEEEcCCCCcccccceeec--
Confidence 99997533 1111 11211100 001348999999972 45556689999998875321 1000
Q ss_pred cCCcceeeeeeeeeeccceeEEEEcCCce--EEEE-cCCcEEEEECCCCceEEE--Ee---eccCCeEEEEEEecCCEEE
Q 046773 279 TDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVAC-TSSRVITFDLRNQGMVLG--ER---GYGRGLYVTSVDVNAEAYI 350 (453)
Q Consensus 279 ~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas-~d~tIrlWDl~t~~~~~~--~~---g~~~~~~v~~~~~~g~~l~ 350 (453)
.... -..+ ........++|+|++. ++++ .+++|++||+.++..... .. .+.....-.+|+++|+.++
T Consensus 200 ---~~~~-~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 200 ---GTPE-AFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp ---EEEE-EEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEE
T ss_pred ---cccc-ceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEE
Confidence 0000 0001 1123456799999874 4445 368999999997643211 11 1112233456888898876
Q ss_pred EEeCC--CccccCcceEEEEEcC--CCe--eEEEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEE--ECCCCeEEEEe
Q 046773 351 VVENR--ELENQNRRLAIVRRVD--TFE--EVCRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVW--EVEGGEYMYSF 420 (453)
Q Consensus 351 s~s~d--g~~~~~~~~i~Iw~~~--tg~--~v~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlW--D~~tG~~l~tL 420 (453)
++..+ + +++||+++ +++ .+..+.. ....+.++++|++++++++. . ++|++| |.++|+.....
T Consensus 275 v~~~~~~~-------~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 275 ASNRLKAD-------GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEECSSSC-------EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EECCCCCC-------EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 65554 5 89999986 454 3444443 44577899999999888776 3 899995 66788875543
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.66 E-value=1.5e-15 Score=157.31 Aligned_cols=161 Identities=9% Similarity=0.020 Sum_probs=116.0
Q ss_pred EEEEeCCCceeeEEE----EeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC-c--eEEEEc
Q 046773 240 LIDFTGCSRYWVGLY----AGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH-E--SAVACT 312 (453)
Q Consensus 240 ~v~Fs~dg~~~~~La----SgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~-~--~~vas~ 312 (453)
.++|+|+|++ || +|+.|++|+|||++++.. +. ......+.....+.+|...|.+|+|+|+ . +++++.
T Consensus 97 ~l~~spdg~~---lav~~~sgs~d~~v~iwd~~~~~~--~~-~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 97 HLALSCDNLT---LSACMMSSEYGSIIAFFDVRTFSN--EA-KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp EEEECTTSCE---EEEEEEETTTEEEEEEEEHHHHHC--TT-CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred EEEEcCCCCE---EEEEEeccCCCceEEEEEcccccc--CC-cCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 4899999997 56 899999999999976510 00 0000001112456789999999999986 3 455678
Q ss_pred CCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC-------C
Q 046773 313 SSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD-------R 385 (453)
Q Consensus 313 d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~-------~ 385 (453)
|++|+|||++++.++....+|...+...+++++|+.+++++.|+ +|+|||.. ++....+..+.. .
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg-------~v~iwd~~-~~~~~~~~~~~~~~~~~~~~ 242 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG-------TVVQYLPT-LQEKKVIPCPPFYESDHPVR 242 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS-------CEEEECTT-CCEEEEECCCTTCCTTSCEE
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC-------cEEEEccC-CcccccccCCcccCCCCcee
Confidence 89999999999866555556666676777888899999999999 99999998 666666654432 4
Q ss_pred eeEEEEeeCCCeEEEEeC--C------eEEEEECCCC
Q 046773 386 NVNVMGCMNQGYALMCVE--G------VIRVWEVEGG 414 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s~--~------tIrlWD~~tG 414 (453)
+.++.++++..++++.+. + .+++||+...
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 677788887766654432 2 4999999864
No 161
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=1.2e-14 Score=156.30 Aligned_cols=271 Identities=12% Similarity=0.005 Sum_probs=162.8
Q ss_pred EEEEEecCCE--EEEE--eCCCcEEEEECCCCeEEEEecCCCCCcccc---c-cceEEEEE--EcCCe-EEEEeCCCCEE
Q 046773 147 CRCLTLSDLY--LACG--FADGAVRLFDLTTRLHVRTFRPQHSDRLGQ---F-SRAVSGII--ITDSQ-LIFATLDGDIH 215 (453)
Q Consensus 147 v~~lafs~~~--LaSG--S~D~TIrlWD~~tg~~~~tl~gh~~~~~~~---~-s~~V~~i~--f~g~~-LasgS~D~tIk 215 (453)
+.+++|+++. +++. +.|++.+||.+..+...+.|.+|....... + ...+. .+ +||+. |++.+. .+.+
T Consensus 26 ~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~SPDg~~~la~~~~-~~~~ 103 (662)
T 3azo_A 26 PACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWA-GVPRPAGGPLLVFTHF-GDQR 103 (662)
T ss_dssp CEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEE-EECCSSSSCEEEEEBT-TTCC
T ss_pred cceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccce-eeeecCCCeEEEEEEC-CCCe
Confidence 7899999974 4455 458899999976666677887664321100 0 00111 22 56888 887654 2445
Q ss_pred EEEeecC----C-cceEEe-----eecceecCceEEEEeCCCceeeEEEEeeCC----------CeEEEeeCCC------
Q 046773 216 VAVIDDV----A-NETRTA-----HFGSVMDDGVLIDFTGCSRYWVGLYAGLAG----------RAFHIWDRQA------ 269 (453)
Q Consensus 216 vWd~~~~----g-~~~~~~-----~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D----------~tIrvWD~~t------ 269 (453)
||.++.. + ...++. |...+ ..++|||||++ |++++.| .+|.+||+.+
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~~~~----~~~~~spDg~~---l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGGLRW----ADPVLLPERGE---VWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTCEEE----EEEEEETTTTE---EEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCCccc----cCcEECCCCCE---EEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 5555432 3 233332 11111 24899999997 6666766 6899999998
Q ss_pred CcEEecccccCCcceeeeeeee-eeccceeEEEEcCCce--EEEEcC--------CcEEEEECC-CCc--eEEEE-eecc
Q 046773 270 EEVFVGGDLTDHNTVMGWRMLT-EFTEFVGRVRVTSHES--AVACTS--------SRVITFDLR-NQG--MVLGE-RGYG 334 (453)
Q Consensus 270 g~~~~g~~l~~~~~v~~w~~l~-~h~~~v~~v~~s~~~~--~vas~d--------~tIrlWDl~-t~~--~~~~~-~g~~ 334 (453)
++.. .+. .+...+..++|+|++. +.++.+ .+|++||+. ++. ....+ .++.
T Consensus 177 ~~~~---------------~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 177 SAVR---------------ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp GGSE---------------ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred Ccee---------------EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 6521 233 3345677789999884 334433 369999999 561 23333 3334
Q ss_pred CCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC--CCeeEEEEEecCC-----C---eeEEEEeeCCCeEEEEeCC
Q 046773 335 RGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD--TFEEVCRFSLRAD-----R---NVNVMGCMNQGYALMCVEG 404 (453)
Q Consensus 335 ~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~--tg~~v~~l~~~~~-----~---v~~~~~~~~~~~lls~s~~ 404 (453)
....-.+++++|+.+++++.++ ..+||.++ +++.......+.+ + +..+.+++++..++++..+
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~-------~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~ 314 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTG-------WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKG 314 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTS-------SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSS
T ss_pred ceEcceEECCCCeEEEEECCCC-------CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcC
Confidence 4455566788888666666666 55666555 5554332222211 1 3456666676655544338
Q ss_pred eEEEE--ECCCCeEEEEecccCCceEEEE-ecCCCEEE--EE-eCCcEEEEe
Q 046773 405 VIRVW--EVEGGEYMYSFRERIGEEVIAF-VGDDRHVA--AS-CGTNIHLWD 450 (453)
Q Consensus 405 tIrlW--D~~tG~~l~tL~gh~~~~V~a~-s~d~~~la--sg-~D~~IklWD 450 (453)
+++|| |+.+++ +.+|..|.+. +..+ ++|+..++ ++ .+....||.
T Consensus 315 ~~~l~~~d~~~~~-~~~l~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 315 AAVLGILDPESGE-LVDAAGPWTE-WAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp SCEEEEEETTTTE-EEECCSSCCE-EEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ccEEEEEECCCCc-EEEecCCCCe-EEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 88899 766666 7888888776 7777 88887543 33 454445553
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.65 E-value=2.8e-13 Score=134.37 Aligned_cols=268 Identities=8% Similarity=0.019 Sum_probs=158.4
Q ss_pred EEEEEeC----CCcEEEEEC--CCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC----CCEEEEEeecC-
Q 046773 156 YLACGFA----DGAVRLFDL--TTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD----GDIHVAVIDDV- 222 (453)
Q Consensus 156 ~LaSGS~----D~TIrlWD~--~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D----~tIkvWd~~~~- 222 (453)
++..|+| ++.|.+|++ ++|+.......+.. .+..++| +++.|++++.+ ++|.+|+++..
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~--------~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVA--------NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK 86 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECS--------CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCC--------CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC
Confidence 4455654 578999965 66764332221111 2233555 57789998886 79999999763
Q ss_pred C-cceEEe-eecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEe------cccccCCcceeeeeeeeeec
Q 046773 223 A-NETRTA-HFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFV------GGDLTDHNTVMGWRMLTEFT 294 (453)
Q Consensus 223 g-~~~~~~-~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~------g~~l~~~~~v~~w~~l~~h~ 294 (453)
| ...+.. .... .....++| ||+++ +++...|++|.+||+.+...+. .+.-..+ ...+.+.
T Consensus 87 g~~~~~~~~~~~~--~~p~~~~~--dg~~l--~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~------~~~~~~~ 154 (361)
T 3scy_A 87 GTLHLLNTQKTMG--ADPCYLTT--NGKNI--VTANYSGGSITVFPIGQDGALLPASDVIEFKGSGP------DKERQTM 154 (361)
T ss_dssp TEEEEEEEEECSS--SCEEEEEE--CSSEE--EEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCS------CTTTCSS
T ss_pred CcEEEeeEeccCC--CCcEEEEE--CCCEE--EEEECCCCEEEEEEeCCCCcCcccceeEEccCCCC------CccccCC
Confidence 3 222221 1111 11123566 77762 3344468999999997643110 0000000 0011223
Q ss_pred cceeEEEEcCCce--EEEEc-CCcEEEEECCCCce------E-E-----E-EeeccCCeEEEEEEecCCEEEEEe-CCCc
Q 046773 295 EFVGRVRVTSHES--AVACT-SSRVITFDLRNQGM------V-L-----G-ERGYGRGLYVTSVDVNAEAYIVVE-NREL 357 (453)
Q Consensus 295 ~~v~~v~~s~~~~--~vas~-d~tIrlWDl~t~~~------~-~-----~-~~g~~~~~~v~~~~~~g~~l~s~s-~dg~ 357 (453)
..+.+++|+|++. ++++. +++|++||+..... + . . .........-.+|+++|+.+++++ .++
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~- 233 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG- 233 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC-
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC-
Confidence 4467899999874 34443 57899999876431 1 1 1 112222333456888888776666 466
Q ss_pred cccCcceEEEEEcCCCee--EEEEEecC---CCeeEEEEeeCCCeEEEEe-C--CeEEEEECC--CCe--EEEEecccCC
Q 046773 358 ENQNRRLAIVRRVDTFEE--VCRFSLRA---DRNVNVMGCMNQGYALMCV-E--GVIRVWEVE--GGE--YMYSFRERIG 425 (453)
Q Consensus 358 ~~~~~~~i~Iw~~~tg~~--v~~l~~~~---~~v~~~~~~~~~~~lls~s-~--~tIrlWD~~--tG~--~l~tL~gh~~ 425 (453)
.+++|++++++. +..+...+ .....+.++|++++++++. + ++|+|||+. +|+ .+..+.. ..
T Consensus 234 ------~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~ 306 (361)
T 3scy_A 234 ------TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GI 306 (361)
T ss_dssp ------EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SS
T ss_pred ------eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CC
Confidence 999999988753 33333222 3356888999999886544 3 799999995 565 4555543 22
Q ss_pred ceEE--EEecCCCEEEEE--eCCcEEEEecC
Q 046773 426 EEVI--AFVGDDRHVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 426 ~~V~--a~s~d~~~lasg--~D~~IklWDl~ 452 (453)
. +. +|+||+++|+++ .+++|.||++.
T Consensus 307 ~-~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 307 H-PRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp C-CCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred C-CceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 2 33 789999988766 67999997653
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=7.6e-16 Score=167.42 Aligned_cols=272 Identities=10% Similarity=0.015 Sum_probs=167.2
Q ss_pred EEEEEecC--CEEEEEeC---------CCcEEEEECCCCeEE--EEecCCCCCccccccceEEE--EEEcCCeEEEEeCC
Q 046773 147 CRCLTLSD--LYLACGFA---------DGAVRLFDLTTRLHV--RTFRPQHSDRLGQFSRAVSG--IIITDSQLIFATLD 211 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~---------D~TIrlWD~~tg~~~--~tl~gh~~~~~~~~s~~V~~--i~f~g~~LasgS~D 211 (453)
+.+++||+ ++||+++. |++|+|||+.+|+++ +.+.. .+.. +++||+.||+++ |
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~-----------~~~~~~~SPDG~~la~~~-~ 129 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPR-----------PIQYLCWSPVGSKLAYVY-Q 129 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCS-----------SBCCEEECSSTTCEEEEE-T
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCc-----------ccccceECCCCCEEEEEE-C
Confidence 45788875 68998876 799999999999874 23321 1222 455688999986 7
Q ss_pred CCEEEEEeecCC-cceEE--eeeccee-------------cCceEEEEeCCCceeeEEEEeeCCC---------------
Q 046773 212 GDIHVAVIDDVA-NETRT--AHFGSVM-------------DDGVLIDFTGCSRYWVGLYAGLAGR--------------- 260 (453)
Q Consensus 212 ~tIkvWd~~~~g-~~~~~--~~~~~v~-------------~~~~~v~Fs~dg~~~~~LaSgS~D~--------------- 260 (453)
++|++|++.+ | ...+. ++...+. .....++|||||++ ||+++.|.
T Consensus 130 ~~i~~~~~~~-g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~---la~~~~d~~~~~~~~~~~~~~~~ 205 (719)
T 1z68_A 130 NNIYLKQRPG-DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF---LAYAEFNDTDIPVIAYSYYGDEQ 205 (719)
T ss_dssp TEEEEESSTT-SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE---EEEEEEECTTSCEEEEEECCSSS
T ss_pred CeEEEEeCCC-CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE---EEEEEECCCCCceEEeeccCCCC
Confidence 8999999976 4 11111 1111111 00024899999997 66776552
Q ss_pred -------------------eEEEeeCCCCcE---EecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEE--cC---
Q 046773 261 -------------------AFHIWDRQAEEV---FVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVAC--TS--- 313 (453)
Q Consensus 261 -------------------tIrvWD~~tg~~---~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas--~d--- 313 (453)
+|+|||+++++. +. +..+ ..+.+|...+.+++|+|++.++.+ ..
T Consensus 206 ~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~ 276 (719)
T 1z68_A 206 YPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE---VPVP------AMIASSDYYFSWLTWVTDERVCLQWLKRVQN 276 (719)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEE---CCCC------HHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred CccceeecCCCCCCCCCeeEEEEEECCCCCccceeE---ccCC------ccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence 889999998763 11 0000 123456778899999999865543 22
Q ss_pred -CcEEEEE----CCCCceEEEE----eeccCCeE-----EEEEEecCCEEEEEe--CCCccccCcceEEEEEcCCCeeEE
Q 046773 314 -SRVITFD----LRNQGMVLGE----RGYGRGLY-----VTSVDVNAEAYIVVE--NRELENQNRRLAIVRRVDTFEEVC 377 (453)
Q Consensus 314 -~tIrlWD----l~t~~~~~~~----~g~~~~~~-----v~~~~~~g~~l~s~s--~dg~~~~~~~~i~Iw~~~tg~~v~ 377 (453)
..|.+|| +.++++.... .+|...+. ...|+++|+.++..+ .++ ...+.+|+.++++ ..
T Consensus 277 ~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g-----~~~l~~~~~~~~~-~~ 350 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG-----YKHIHYIKDTVEN-AI 350 (719)
T ss_dssp EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS-----CEEEEEESSCSTT-CE
T ss_pred eEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC-----ceEEEEEECCCCc-eE
Confidence 2488999 8887553222 23332222 356889998766533 344 2245555666665 34
Q ss_pred EEEecCCCeeEEEEeeCCCeEEEEe-C-----CeEEEEECCC--Ce-EEEEe----cccCCceEE--EEecCCCEEEE-E
Q 046773 378 RFSLRADRNVNVMGCMNQGYALMCV-E-----GVIRVWEVEG--GE-YMYSF----RERIGEEVI--AFVGDDRHVAA-S 441 (453)
Q Consensus 378 ~l~~~~~~v~~~~~~~~~~~lls~s-~-----~tIrlWD~~t--G~-~l~tL----~gh~~~~V~--a~s~d~~~las-g 441 (453)
.++.+...+..+.++ +++.++..+ . ++++||.+.. |. ....| .+|... +. +|+||+++|+. .
T Consensus 351 ~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~-~~~~~~s~dg~~l~~~~ 428 (719)
T 1z68_A 351 QITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQ-YYTASFSDYAKYYALVC 428 (719)
T ss_dssp ECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBC-BEEEEECGGGSSEEEEE
T ss_pred ecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCc-eEEEEECCCCCEEEEEc
Confidence 454444446667777 888777554 2 6789998764 42 12333 335444 43 78899987763 3
Q ss_pred -e--CCcEEEEec
Q 046773 442 -C--GTNIHLWDF 451 (453)
Q Consensus 442 -~--D~~IklWDl 451 (453)
. ...+.+||+
T Consensus 429 s~~~~p~~~l~d~ 441 (719)
T 1z68_A 429 YGPGIPISTLHDG 441 (719)
T ss_dssp CCBSSCEEEEECS
T ss_pred CCCCCCeEEEEEC
Confidence 2 257888886
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=7.6e-13 Score=130.85 Aligned_cols=259 Identities=12% Similarity=0.017 Sum_probs=154.9
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCc
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVAN 224 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~ 224 (453)
+.+++|++ +++++.+.++.++++ ++.....+..+.. ++ -.+++|.+||.++ |
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~---~~~~~~~~~~~~~---~~------------------~~~~~i~~~d~~~-g- 79 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGN---SFDSKFVYQQRGL---GP------------------IEEDTILVIDPNN-A- 79 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTT---SBCTTSCBSCGGG---CS------------------CCSCCEEEECTTT-C-
T ss_pred ceEEEECCCCCEEEEeCCCCeEEee---ccCcceeeccccc---cc------------------ccCCcEEEEECCC-C-
Confidence 78899985 688999888654433 3332223322111 00 0245566666554 3
Q ss_pred ceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EE-ecccccCCcceeeeeeeeeeccceeEEE
Q 046773 225 ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VF-VGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 225 ~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~-~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
..++.-..........|+|+|+|+. +++.+.+++|++||..... .. .+.... +. .-.++......|+
T Consensus 80 ~~~~~~~~~~~~~p~gia~d~~g~l---~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-~g------~~~~~~~~P~~ia 149 (329)
T 3fvz_A 80 EILQSSGKNLFYLPHGLSIDTDGNY---WVTDVALHQVFKLDPHSKEGPLLILGRSMQ-PG------SDQNHFCQPTDVA 149 (329)
T ss_dssp CEEEEECTTTCSSEEEEEECTTSCE---EEEETTTTEEEEECTTCSSCCSEEESBTTB-CC------CSTTCCSSEEEEE
T ss_pred eEEeccCCCccCCceEEEECCCCCE---EEEECCCCEEEEEeCCCCeEEEEEecccCC-CC------CCccccCCCcEEE
Confidence 1111100000011124789999985 5677788999999987652 11 110000 00 0012334567899
Q ss_pred EcC-Cc-eEEEEc--CCcEEEEECCCCceEEEEeeccC----------CeEEEEEEec-CCEEEEEeCCCccccCcceEE
Q 046773 302 VTS-HE-SAVACT--SSRVITFDLRNQGMVLGERGYGR----------GLYVTSVDVN-AEAYIVVENRELENQNRRLAI 366 (453)
Q Consensus 302 ~s~-~~-~~vas~--d~tIrlWDl~t~~~~~~~~g~~~----------~~~v~~~~~~-g~~l~s~s~dg~~~~~~~~i~ 366 (453)
|+| ++ ++++.. +.+|++||. ++..+......+. ...-.+++++ +..+++.+.++ .|+
T Consensus 150 ~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~-------~I~ 221 (329)
T 3fvz_A 150 VEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG-------RIQ 221 (329)
T ss_dssp ECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT-------EEE
T ss_pred EeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC-------EEE
Confidence 998 55 455553 578999994 5555544421111 1223456777 55556656666 899
Q ss_pred EEEcCCCeeEEEEEec--CCCeeEEEEeeCCCeEEEEe--------C-CeEEEEECCCCeEEEEec---ccCCceEE--E
Q 046773 367 VRRVDTFEEVCRFSLR--ADRNVNVMGCMNQGYALMCV--------E-GVIRVWEVEGGEYMYSFR---ERIGEEVI--A 430 (453)
Q Consensus 367 Iw~~~tg~~v~~l~~~--~~~v~~~~~~~~~~~lls~s--------~-~tIrlWD~~tG~~l~tL~---gh~~~~V~--a 430 (453)
+|+.++|+.+..+... ...+..+.++| +.++... . .+|++||+.+|+.+.++. ++... .. +
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~-p~~ia 298 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM-PHDIV 298 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS-EEEEE
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC-eeEEE
Confidence 9999999888877433 34466677766 3333322 2 599999999999999984 56555 55 6
Q ss_pred EecCCCEEEEE-eCCcEEEEecC
Q 046773 431 FVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 431 ~s~d~~~lasg-~D~~IklWDl~ 452 (453)
++|||..+++. .+++|++|++.
T Consensus 299 ~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 299 ASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp ECTTSEEEEEESSSCCEEEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEeCC
Confidence 78999777887 89999999863
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=3.5e-13 Score=134.27 Aligned_cols=260 Identities=13% Similarity=0.039 Sum_probs=152.6
Q ss_pred EEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeC-CCC--EEEEEeecCC-cceEE-eeecceecCceE
Q 046773 166 VRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATL-DGD--IHVAVIDDVA-NETRT-AHFGSVMDDGVL 240 (453)
Q Consensus 166 IrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~-D~t--IkvWd~~~~g-~~~~~-~~~~~v~~~~~~ 240 (453)
...+|..+|.+++.|..|.......+... .++++||+.|++++. |++ |.+||+.+ + ...+. .+...+ ..
T Consensus 12 ~~~~~~~~g~~~~~lt~~~~~~~~~~~~~-~~~SpDg~~l~~~~~~~g~~~l~~~d~~~-g~~~~lt~~~~~~~----~~ 85 (388)
T 3pe7_A 12 DTYQDASTGAQVTRLTPPDVTCHRNYFYQ-KCFTRDGSKLLFGGAFDGPWNYYLLDLNT-QVATQLTEGRGDNT----FG 85 (388)
T ss_dssp EEEECTTTCCEEEECSCTTSCEECCCTTS-CCBCTTSCEEEEEECTTSSCEEEEEETTT-CEEEECCCSSCBCS----SS
T ss_pred eEEecCCCCcceEEecCCcccccchhhcC-ccCCCCCCEEEEEEcCCCCceEEEEeCCC-CceEEeeeCCCCCc----cc
Confidence 34678899999999987653211100000 124567889999887 776 55566655 4 11111 111111 12
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEE--EEcCCceEEEE-------
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRV--RVTSHESAVAC------- 311 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v--~~s~~~~~vas------- 311 (453)
+.|+|||+. |+.++.|.+|.+||+++++... ....+...+... .+++++..+++
T Consensus 86 ~~~spdg~~---l~~~~~~~~l~~~d~~~g~~~~--------------~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~ 148 (388)
T 3pe7_A 86 GFLSPDDDA---LFYVKDGRNLMRVDLATLEENV--------------VYQVPAEWVGYGTWVANSDCTKLVGIEIRRED 148 (388)
T ss_dssp CEECTTSSE---EEEEETTTEEEEEETTTCCEEE--------------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred eEEcCCCCE---EEEEeCCCeEEEEECCCCccee--------------eeechhhcccccceeECCCCCeeccccccCcc
Confidence 589999997 7788889999999999988321 011122223222 23666654432
Q ss_pred -----------------cCCcEEEEECCCCceEEEEeeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCC
Q 046773 312 -----------------TSSRVITFDLRNQGMVLGERGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTF 373 (453)
Q Consensus 312 -----------------~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg 373 (453)
.+..|.+||+.+++. ..+..+.....-.+++| +|+.++..+.+. .+.....+.+++.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~-~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 149 WVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTVAFCHEGP-HDLVDARMWLINEDGT 226 (388)
T ss_dssp CCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEEEEEECSC-TTTSSCSEEEEETTSC
T ss_pred cccccccchhhhhhccCCcceEEEEECCCCce-EEeecCCccccccEECCCCCCEEEEEEecC-CCCCcceEEEEeCCCC
Confidence 125799999999864 33323333344566888 888887776532 1111224555565554
Q ss_pred eeEEEEEecCC--CeeEEEEeeCCCeEEEEeC---C---eEEEEECCCCe--EEEEecccCCceEE-----EEecCCCEE
Q 046773 374 EEVCRFSLRAD--RNVNVMGCMNQGYALMCVE---G---VIRVWEVEGGE--YMYSFRERIGEEVI-----AFVGDDRHV 438 (453)
Q Consensus 374 ~~v~~l~~~~~--~v~~~~~~~~~~~lls~s~---~---tIrlWD~~tG~--~l~tL~gh~~~~V~-----a~s~d~~~l 438 (453)
+ +..+..+.. .+....++|++++++..+. . +|.+||+++|+ .+..+.++... .. +|+|||+.|
T Consensus 227 ~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~-~~~~~~~~~spdg~~l 304 (388)
T 3pe7_A 227 N-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHL-MSNYDGSLMVGDGSDA 304 (388)
T ss_dssp C-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEE-EECTTSSEEEEEECCC
T ss_pred c-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceee-eecCCCCeEccCCCcc
Confidence 3 333333332 3556789999998865442 2 49999999997 45555552111 11 689999988
Q ss_pred EEE----------eCCcEEEEecC
Q 046773 439 AAS----------CGTNIHLWDFG 452 (453)
Q Consensus 439 asg----------~D~~IklWDl~ 452 (453)
+.. .+..|++||+.
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 305 PVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp ------------CCCCEEEEEETT
T ss_pred eeEeeeccccccCCCCEEEEEecc
Confidence 743 35689999974
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.57 E-value=2.6e-14 Score=156.89 Aligned_cols=232 Identities=9% Similarity=-0.011 Sum_probs=148.7
Q ss_pred EEEc--CCeEEEEeCCCCEEEEEeecCC--cceEEeeecceec-CceEEEEeCCCceeeEEEEeeCCC---------eEE
Q 046773 198 IIIT--DSQLIFATLDGDIHVAVIDDVA--NETRTAHFGSVMD-DGVLIDFTGCSRYWVGLYAGLAGR---------AFH 263 (453)
Q Consensus 198 i~f~--g~~LasgS~D~tIkvWd~~~~g--~~~~~~~~~~v~~-~~~~v~Fs~dg~~~~~LaSgS~D~---------tIr 263 (453)
++|. +..|+++ |++|++||+.+ | ...+..|...... ....++|||||++ |+.++.|+ .+.
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~---l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEY-GNSSVFLENSTFDEFGHSINDYSISPDGQF---ILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTT-CCEEEEECTTTTTTCCSCCCEEEECTTSSE---EEEEEEEEECSSSCEEEEEE
T ss_pred cEECCCCcEEEEc--CCcEEEEECCC-CceEEEEechhhhhhcccccceEECCCCCE---EEEEECCeeeEEEccceEEE
Confidence 5554 5567765 99999999987 5 2233333322111 0112689999997 56667664 456
Q ss_pred EeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEE-EcCCcEEEEECCCCceEEE-EeeccCCe----
Q 046773 264 IWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVA-CTSSRVITFDLRNQGMVLG-ERGYGRGL---- 337 (453)
Q Consensus 264 vWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~va-s~d~tIrlWDl~t~~~~~~-~~g~~~~~---- 337 (453)
|||+++|++. .|..|...+..++|||++..++ +.++.|.+||+.++.+... ..++....
T Consensus 96 ~~d~~~~~~~---------------~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~ 160 (740)
T 4a5s_A 96 IYDLNKRQLI---------------TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGI 160 (740)
T ss_dssp EEETTTTEEC---------------CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESB
T ss_pred EEECCCCcEE---------------EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCc
Confidence 9999999842 2445667788999999986444 4678999999998765322 12322111
Q ss_pred -------------EEEEEEecCCEEEEEeCCCccc-----------------------------cCcceEEEEEcCC---
Q 046773 338 -------------YVTSVDVNAEAYIVVENRELEN-----------------------------QNRRLAIVRRVDT--- 372 (453)
Q Consensus 338 -------------~v~~~~~~g~~l~s~s~dg~~~-----------------------------~~~~~i~Iw~~~t--- 372 (453)
....++|||+.|+.++.|.... ....++.|||+++
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCS
T ss_pred ccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCC
Confidence 1156899999999887543100 0112578899988
Q ss_pred Ce--eEEEEEe------cCCCeeEEEEeeCCCeEEEEeC-----CeEEEEECCCCe----EEEE--e--cccCCceEE--
Q 046773 373 FE--EVCRFSL------RADRNVNVMGCMNQGYALMCVE-----GVIRVWEVEGGE----YMYS--F--RERIGEEVI-- 429 (453)
Q Consensus 373 g~--~v~~l~~------~~~~v~~~~~~~~~~~lls~s~-----~tIrlWD~~tG~----~l~t--L--~gh~~~~V~-- 429 (453)
++ ....+.. +...+..+.++||++.++.... .+|++||+++|+ |... + .+|.++ |.
T Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~-v~~~ 319 (740)
T 4a5s_A 241 VTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW-VGRF 319 (740)
T ss_dssp SSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC-SSSS
T ss_pred CCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce-EccC
Confidence 74 2333432 4444778889999886554432 489999999998 6433 3 456554 32
Q ss_pred -----EEecCCCEEE-EE--eCC--cEEEEec
Q 046773 430 -----AFVGDDRHVA-AS--CGT--NIHLWDF 451 (453)
Q Consensus 430 -----a~s~d~~~la-sg--~D~--~IklWDl 451 (453)
+|+|||+.|+ .. .|+ .|.+||+
T Consensus 320 ~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 320 RPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp SCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 7899999876 44 344 5777775
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=1.7e-12 Score=130.72 Aligned_cols=254 Identities=12% Similarity=0.058 Sum_probs=159.7
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEe----------CCCCEEEEEeecCC--cceE
Q 046773 162 ADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFAT----------LDGDIHVAVIDDVA--NETR 227 (453)
Q Consensus 162 ~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS----------~D~tIkvWd~~~~g--~~~~ 227 (453)
.|++|.+||..+++.+.++..+.. . .++| +++.|+.++ .|++|.+||..+ + +..+
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~--------p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t-~~~~~~i 97 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFN--------G--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK-LTFEKEI 97 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEE--------E--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT-CCEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecCCCC--------C--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC-CcEEEEE
Confidence 588999999999999988865321 1 4555 467787775 367899999876 3 2222
Q ss_pred Eeeecce--ecCceEEEEeCCCceeeEEEEeeC--CCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEc
Q 046773 228 TAHFGSV--MDDGVLIDFTGCSRYWVGLYAGLA--GRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT 303 (453)
Q Consensus 228 ~~~~~~v--~~~~~~v~Fs~dg~~~~~LaSgS~--D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s 303 (453)
....... ......++|+|||++ |+++.. +++|.|||+++++.+. ++..+.. ...+.+.
T Consensus 98 ~~~~~~~~~g~~p~~i~~spdg~~---l~v~n~~~~~~v~v~d~~~~~~~~--------------~~i~~~~-~~~v~~~ 159 (361)
T 2oiz_A 98 SLPPKRVQGLNYDGLFRQTTDGKF---IVLQNASPATSIGIVDVAKGDYVE--------------DVTAAAG-CWSVIPQ 159 (361)
T ss_dssp EECTTBCCBCCCGGGEEECTTSSE---EEEEEESSSEEEEEEETTTTEEEE--------------EEGGGTT-EEEEEEC
T ss_pred EcCccccccCCCcceEEECCCCCE---EEEECCCCCCeEEEEECCCCcEEE--------------EEecCCC-cceeEEc
Confidence 2221110 011123899999997 555553 6899999999988431 1000101 1124455
Q ss_pred CCc---eEEEEcCCcEEEEECCC-CceEEEEe----eccCCe-EEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe
Q 046773 304 SHE---SAVACTSSRVITFDLRN-QGMVLGER----GYGRGL-YVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE 374 (453)
Q Consensus 304 ~~~---~~vas~d~tIrlWDl~t-~~~~~~~~----g~~~~~-~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~ 374 (453)
|.+ .++.+.|+++.+|+++. ++...... .+.... ....+++++..++..+.++ .+.++|+...+
T Consensus 160 p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~v~v~d~~~~~ 232 (361)
T 2oiz_A 160 PNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYG-------NVYSADFSGDE 232 (361)
T ss_dssp TTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTS-------EEEEEECSSSS
T ss_pred CCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCC-------eEEEEEecCCC
Confidence 533 45557789999999876 44331110 000000 0112356677777777777 88888886543
Q ss_pred --eEEEEEe----------cCCCeeEEEEeeCCCeEEEEe------------CCeEEEEECCCCeEEEEecccCCceEEE
Q 046773 375 --EVCRFSL----------RADRNVNVMGCMNQGYALMCV------------EGVIRVWEVEGGEYMYSFRERIGEEVIA 430 (453)
Q Consensus 375 --~v~~l~~----------~~~~v~~~~~~~~~~~lls~s------------~~tIrlWD~~tG~~l~tL~gh~~~~V~a 430 (453)
.+..+.. .+...+.++++++++++..+. +++|.+||+++++.+.+++.+. ..--+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia 311 (361)
T 2oiz_A 233 VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMT 311 (361)
T ss_dssp CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEE
T ss_pred ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEE
Confidence 1222221 122233467888888776542 1489999999999999998776 41238
Q ss_pred EecCCCEEEEEeCCcEEEEecC
Q 046773 431 FVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 431 ~s~d~~~lasg~D~~IklWDl~ 452 (453)
|+|||++|+++.+++|.|||..
T Consensus 312 ~spdg~~l~v~n~~~v~v~D~~ 333 (361)
T 2oiz_A 312 IDQQRNLMLTLDGGNVNVYDIS 333 (361)
T ss_dssp EETTTTEEEEECSSCEEEEECS
T ss_pred ECCCCCEEEEeCCCeEEEEECC
Confidence 8999999998833999999964
No 168
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.55 E-value=2.4e-13 Score=140.61 Aligned_cols=199 Identities=11% Similarity=0.026 Sum_probs=134.8
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeee--eeeeeeccceeEEEEcCCceEEE----E--
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGW--RMLTEFTEFVGRVRVTSHESAVA----C-- 311 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w--~~l~~h~~~v~~v~~s~~~~~va----s-- 311 (453)
.+++++++.+ |++|+.|+ |+||+...-..... ...+....... .....+...|.+++|++++..++ +
T Consensus 41 ~lavs~~~~~---l~~~~~dg-v~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 41 LLAVSNKYGL---VFAGGASG-LQIFPTKNLLIQNK-PGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CEEEETTTTE---EEEEETTE-EEEEEHHHHCCCCC-TTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred EEEEecCCCE---EEEECCCE-EEEEEchHhhhhcc-cccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 4789998875 67888777 99988532110000 00000000000 01123456799999999875444 3
Q ss_pred cCCcEEEEECCCC--------ce---EEEEeeccCCeEEEEEEec-CCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 312 TSSRVITFDLRNQ--------GM---VLGERGYGRGLYVTSVDVN-AEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 312 ~d~tIrlWDl~t~--------~~---~~~~~g~~~~~~v~~~~~~-g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
.|++|+|||++++ +. +....+|...+...+|+|+ ++.+++++.|+ +++|||+.+++.+...
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg-------~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG-------SIAVLQVTETVKVCAT 188 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS-------CEEEEEESSSEEEEEE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC-------eEEEEEcCCCcceeec
Confidence 3579999999764 11 2223556666655566666 67899999999 9999999998777666
Q ss_pred EecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCC-------ceEE--EEecCCCEEEEE--eCC---
Q 046773 380 SLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIG-------EEVI--AFVGDDRHVAAS--CGT--- 444 (453)
Q Consensus 380 ~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~-------~~V~--a~s~d~~~lasg--~D~--- 444 (453)
..|...+..+.+++++.++++++. ++|++||++ ++...++..|.. . |. ++++++.++++. .|+
T Consensus 189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~-v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVR-VLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEE-EEEEEEEETTEEEEEEEETTCCSS
T ss_pred cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCcee-EEEEEEecCceEEEEEccCCCccC
Confidence 667777999999999999998887 999999998 777777765532 3 66 455777777543 453
Q ss_pred ---cEEEEecC
Q 046773 445 ---NIHLWDFG 452 (453)
Q Consensus 445 ---~IklWDl~ 452 (453)
.+++||+.
T Consensus 267 ~~~~v~i~~l~ 277 (434)
T 2oit_A 267 TSPDVVMALLP 277 (434)
T ss_dssp SCCEEEEEECC
T ss_pred CCCceEEEEec
Confidence 38999974
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=2.8e-13 Score=134.71 Aligned_cols=272 Identities=9% Similarity=-0.009 Sum_probs=163.7
Q ss_pred EEEEEecC--CEEEEEeCC---CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeec
Q 046773 147 CRCLTLSD--LYLACGFAD---GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDD 221 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D---~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~ 221 (453)
+.+++||+ ++||..+.+ ..|.+||+.+++..+...++.... ....++++|+.|++.+.++.|++||+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~------~~~~~spdg~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNT------FGGFISTDERAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCT------TTCEECTTSSEEEEEETTTEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCcc------ccceECCCCCEEEEEEcCCcEEEEECCC
Confidence 34567765 677766543 478999999998755443321110 0012456788999999999999999877
Q ss_pred CC-cceEE-eeecceecCceEE----------------EEeCCCceeeEEEEe-----eCCCeEEEeeCCCCcEEecccc
Q 046773 222 VA-NETRT-AHFGSVMDDGVLI----------------DFTGCSRYWVGLYAG-----LAGRAFHIWDRQAEEVFVGGDL 278 (453)
Q Consensus 222 ~g-~~~~~-~~~~~v~~~~~~v----------------~Fs~dg~~~~~LaSg-----S~D~tIrvWD~~tg~~~~g~~l 278 (453)
+ ...+. .+.+ ...++..| +|+|||+++ +.. ..+..|.+||+++++..
T Consensus 112 -~~~~~~~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~---~~~~~~~~~~~~~l~~~d~~~g~~~----- 181 (396)
T 3c5m_A 112 -LEEQVIYTVDEE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWE---KFAEFYHTNPTCRLIKVDIETGELE----- 181 (396)
T ss_dssp -CCEEEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH---HHHHHHHTCCCEEEEEEETTTCCEE-----
T ss_pred -CCcEEEEecccc-cCCCCCEEEeccCCccccccccccccCCCCcce---eeeeeccCCCcceEEEEECCCCcEE-----
Confidence 4 22222 1222 11122222 457887752 222 45678999999998732
Q ss_pred cCCcceeeeeeeeeeccceeEEEEcC-Cce--EEEEcC------CcEEEEECCCCceEEEEeeccCC--eEEEEEEecCC
Q 046773 279 TDHNTVMGWRMLTEFTEFVGRVRVTS-HES--AVACTS------SRVITFDLRNQGMVLGERGYGRG--LYVTSVDVNAE 347 (453)
Q Consensus 279 ~~~~~v~~w~~l~~h~~~v~~v~~s~-~~~--~vas~d------~tIrlWDl~t~~~~~~~~g~~~~--~~v~~~~~~g~ 347 (453)
.+..+...+..+.|+| ++. +..+.+ ..|.+||+.++.. ..+..+... ....+|+|+|+
T Consensus 182 ----------~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 182 ----------VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp ----------EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSS
T ss_pred ----------eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCC
Confidence 1223445678889998 553 333432 3588899986542 222222112 22346778888
Q ss_pred EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEee-CCCeEEEEe----------------C-CeEEEE
Q 046773 348 AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCM-NQGYALMCV----------------E-GVIRVW 409 (453)
Q Consensus 348 ~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~-~~~~lls~s----------------~-~tIrlW 409 (453)
.++.++.+.. .....+.+|++.+++....... +. .. ..+++ +++.++.++ . ..|.+|
T Consensus 251 ~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~-~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~ 325 (396)
T 3c5m_A 251 AMAYVSYFKG--QTDRVIYKANPETLENEEVMVM-PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVL 325 (396)
T ss_dssp CEEEEEEETT--TCCEEEEEECTTTCCEEEEEEC-CS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEE
T ss_pred EEEEEecCCC--CccceEEEEECCCCCeEEeeeC-CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEE
Confidence 8877765421 1112589999988865433222 22 33 77888 888766543 2 789999
Q ss_pred ECCCCeEEEEecccCCce----------E--EEEecCCCEEEEE--eCCcEEEEec
Q 046773 410 EVEGGEYMYSFRERIGEE----------V--IAFVGDDRHVAAS--CGTNIHLWDF 451 (453)
Q Consensus 410 D~~tG~~l~tL~gh~~~~----------V--~a~s~d~~~lasg--~D~~IklWDl 451 (453)
|+.+++. ..|..+.... + -+|+||++.|+.. .++...||.+
T Consensus 326 d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 326 NTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp ETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 9998875 4455554310 1 2789999988765 4666667654
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.52 E-value=2.9e-12 Score=128.24 Aligned_cols=246 Identities=7% Similarity=-0.034 Sum_probs=145.8
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECC-CCeEEEEecCCCCCccccccceEEEEEEcCCe--EEEEe------------
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLT-TRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQ--LIFAT------------ 209 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~-tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~--LasgS------------ 209 (453)
+..++|++ ++|++++.+ +|++||+. +|++.+... +.... .+. .+ ++..+|+. +++++
T Consensus 42 ~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~-~~~~g-~~~--~~-~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEAS-HPIGG-HPR--AN-DADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEE-EECCS-SGG--GG-CTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeE-eecCC-CCc--cE-EECCCCCEEEEEEecCCcceeccceee
Confidence 45788875 689999998 99999998 898765443 11000 011 11 12334663 44543
Q ss_pred -CCCCEEEEEeecCC-c-ceEEeeecceecCceEEEEeCCCceeeEEEEee-CCCeEEEeeCC-CCcEEecccccCCcce
Q 046773 210 -LDGDIHVAVIDDVA-N-ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL-AGRAFHIWDRQ-AEEVFVGGDLTDHNTV 284 (453)
Q Consensus 210 -~D~tIkvWd~~~~g-~-~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-~D~tIrvWD~~-tg~~~~g~~l~~~~~v 284 (453)
.++++++|+++..| + ..+.............++|+|||++ |+++. .+.+|++||++ +|+...-
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~---l~~~~~~~~~v~~~~~~~~g~~~~~--------- 183 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY---LYSADLTANKLWTHRKLASGEVELV--------- 183 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE---EEEEETTTTEEEEEEECTTSCEEEE---------
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE---EEEEcCCCCEEEEEEECCCCCEEEe---------
Confidence 68999999997434 1 1222210000011224899999997 44444 57899999998 7773210
Q ss_pred eeeeeee--eeccceeEEEEcCCce--EEEEc-CCcEEEEECC--CCceEE---EE-e------eccC------CeEEEE
Q 046773 285 MGWRMLT--EFTEFVGRVRVTSHES--AVACT-SSRVITFDLR--NQGMVL---GE-R------GYGR------GLYVTS 341 (453)
Q Consensus 285 ~~w~~l~--~h~~~v~~v~~s~~~~--~vas~-d~tIrlWDl~--t~~~~~---~~-~------g~~~------~~~v~~ 341 (453)
..+. .|...+..++|+|++. ++++. +++|++|++. +++... .. . +|.. ...-.+
T Consensus 184 ---~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 260 (365)
T 1jof_A 184 ---GSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVC 260 (365)
T ss_dssp ---EEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEE
T ss_pred ---eeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEE
Confidence 0111 1234567899999873 44454 5789999765 565422 11 1 1110 133356
Q ss_pred -EEecCCEEEEEeCCCccccCcceEEEEEcC-CCeeEEE---EEecCCCeeEEEEee---CCCeEEEEeC--CeEEEEEC
Q 046773 342 -VDVNAEAYIVVENRELENQNRRLAIVRRVD-TFEEVCR---FSLRADRNVNVMGCM---NQGYALMCVE--GVIRVWEV 411 (453)
Q Consensus 342 -~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~---l~~~~~~v~~~~~~~---~~~~lls~s~--~tIrlWD~ 411 (453)
|+|+|+.+++++.+.. .....+++||+++ +++.... +.........++++| ++++++++.. ++|+||++
T Consensus 261 ~~spdG~~l~v~~~~~~-~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 261 ALTFSGKYMFASSRANK-FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp EECTTSSEEEEEEEESS-TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred EECCCCCEEEEECCCCC-CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 7788888776554330 0011279999986 6654332 222334456788899 7999887764 89999999
Q ss_pred CCC
Q 046773 412 EGG 414 (453)
Q Consensus 412 ~tG 414 (453)
...
T Consensus 340 ~~~ 342 (365)
T 1jof_A 340 KDE 342 (365)
T ss_dssp ETT
T ss_pred chh
Confidence 876
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.50 E-value=1.4e-11 Score=120.81 Aligned_cols=257 Identities=12% Similarity=0.040 Sum_probs=146.4
Q ss_pred EEEEEecCCEEEEE---------eCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC---C
Q 046773 147 CRCLTLSDLYLACG---------FADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD---G 212 (453)
Q Consensus 147 v~~lafs~~~LaSG---------S~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D---~ 212 (453)
+..++|++++||.. +++.+|.+||+.+++.. .|. .+..++| ||+.|++.+.+ +
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~------------~~~~~~~SpDg~~la~~~~~~~~~ 83 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FIE------------NATMPRISPDGKKIAFMRANEEKK 83 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EEE------------SCEEEEECTTSSEEEEEEEETTTT
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ecc------------cCCCeEECCCCCEEEEEEeccCCC
Confidence 45566677776653 34788999999999854 441 1333444 57889998765 3
Q ss_pred C--EEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeC---------------------------CCeE
Q 046773 213 D--IHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLA---------------------------GRAF 262 (453)
Q Consensus 213 t--IkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~---------------------------D~tI 262 (453)
. |.+|++++ | ...+..+.. + ..++|+|||+. |+.++. ...|
T Consensus 84 ~~~l~~~~~~~-g~~~~l~~~~~-~----~~~~wspdg~~---l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 84 VSEIWVADLET-LSSKKILEAKN-I----RSLEWNEDSRK---LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp EEEEEEEETTT-TEEEEEEEESE-E----EEEEECTTSSE---EEEEEECCCC---------CCCC---------CEEEE
T ss_pred cceEEEEECCC-CceEEEEcCCC-c----cceeECCCCCE---EEEEEccCCCcCCcEEEcccceeecCcccccCccceE
Confidence 4 55556655 4 222222221 2 24799999997 444442 2579
Q ss_pred EEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc-C------C-cEEEEECCCCceEEEEeecc
Q 046773 263 HIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT-S------S-RVITFDLRNQGMVLGERGYG 334 (453)
Q Consensus 263 rvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~-d------~-tIrlWDl~t~~~~~~~~g~~ 334 (453)
.+||+.+++... .+.. . .+..+.++|++++.++. + . ..+||.+.+++ +..+..+
T Consensus 155 ~~~d~~~~~~~~--------------~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~- 216 (347)
T 2gop_A 155 WIFDTESEEVIE--------------EFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK- 216 (347)
T ss_dssp EEEETTTTEEEE--------------EEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-
T ss_pred EEEECCCCeEEe--------------eecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEeccC-
Confidence 999999887421 1223 2 57788999988433332 2 1 44565555443 3333222
Q ss_pred CCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeE-EEEeeCCCeEEEEeC-CeEEEEECC
Q 046773 335 RGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVN-VMGCMNQGYALMCVE-GVIRVWEVE 412 (453)
Q Consensus 335 ~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~-~~~~~~~~~lls~s~-~tIrlWD~~ 412 (453)
..+.+++|+|+.++.++.+..... ....+||.+++++.......++..+.. +.++ ++ .+++++. ++++|| +.
T Consensus 217 --~~~~~~spdg~~l~~~~~~~~~~~-~~~~~l~~~d~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 217 --VSFYAVDSDGERILLYGKPEKKYM-SEHNKLYIYDGKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp --ESEEEEEECSSCEEEEECCSSSCC-CSSCEEEEECSSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred --cceeeECCCCCEEEEEEccccCCc-cccceEEEECCCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 223455999998888775541100 012344444455433222222333554 6666 65 5455555 899999 88
Q ss_pred CCeEEEEecccCCceEEEEecCCCEEEEE-eCCcE-EEEec
Q 046773 413 GGEYMYSFRERIGEEVIAFVGDDRHVAAS-CGTNI-HLWDF 451 (453)
Q Consensus 413 tG~~l~tL~gh~~~~V~a~s~d~~~lasg-~D~~I-klWDl 451 (453)
+|+....+ .+.+. |.+++.++++++++ .+++. +||.+
T Consensus 291 ~g~~~~~~-~~~~~-v~~~~~s~~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 291 DGEIKPIA-KGRHW-IMGFDVDEIVVYLKETATRLRELFTW 329 (347)
T ss_dssp SSSEEEEE-CSSSE-EEEEEESSSEEEEEECSSSCCEEEEE
T ss_pred CCceEEEe-cCCCe-EEeeeeeCcEEEEEcCCCChHHheEe
Confidence 77765444 34555 77544222666666 55554 77754
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.46 E-value=1.8e-10 Score=110.14 Aligned_cols=237 Identities=9% Similarity=0.026 Sum_probs=143.6
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc---CCeEEEEeC-CCCEEEEEee
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT---DSQLIFATL-DGDIHVAVID 220 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~---g~~LasgS~-D~tIkvWd~~ 220 (453)
..++++++ +++++.+.+++|++||.+ ++.++.+..... . ......+.+++++ +..+++... ++.|++||.+
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~-~-~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~ 108 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGK-R-DSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 108 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSS-S-TTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCC-C-cccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC
Confidence 78899975 688888999999999987 777777742110 0 0011245678883 334444433 8899999843
Q ss_pred cCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEE
Q 046773 221 DVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRV 300 (453)
Q Consensus 221 ~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v 300 (453)
| ..+......-......++|+|+|+. +++.+.++.|.+||........- ...++...+..+
T Consensus 109 --g-~~~~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~~~~g~~~~~~-------------~~~~~~~~p~~i 169 (286)
T 1q7f_A 109 --G-QFVRKFGATILQHPRGVTVDNKGRI---IVVECKVMRVIIFDQNGNVLHKF-------------GCSKHLEFPNGV 169 (286)
T ss_dssp --S-CEEEEECTTTCSCEEEEEECTTSCE---EEEETTTTEEEEECTTSCEEEEE-------------ECTTTCSSEEEE
T ss_pred --C-cEEEEecCccCCCceEEEEeCCCCE---EEEECCCCEEEEEcCCCCEEEEe-------------CCCCccCCcEEE
Confidence 3 2221111000011224899999985 45667789999999653322110 001223456789
Q ss_pred EEcCCceEE-EEc-CCcEEEEECCCCceEEEEeecc--CCeEEEEEEecCCEEEEEeCC-CccccCcceEEEEEcCCCee
Q 046773 301 RVTSHESAV-ACT-SSRVITFDLRNQGMVLGERGYG--RGLYVTSVDVNAEAYIVVENR-ELENQNRRLAIVRRVDTFEE 375 (453)
Q Consensus 301 ~~s~~~~~v-as~-d~tIrlWDl~t~~~~~~~~g~~--~~~~v~~~~~~g~~l~s~s~d-g~~~~~~~~i~Iw~~~tg~~ 375 (453)
++++++.+. +.. ++.|++||.. ++.+.....++ ....-.+++++|+.+++.+.+ + .|++|+. +++.
T Consensus 170 ~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~-------~i~~~~~-~g~~ 240 (286)
T 1q7f_A 170 VVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF-------NLTIFTQ-DGQL 240 (286)
T ss_dssp EECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSC-------EEEEECT-TSCE
T ss_pred EECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCE-------EEEEECC-CCCE
Confidence 999876544 433 5789999985 45544442222 223335567777766665444 3 7889985 4666
Q ss_pred EEEEEecCC--CeeEEEEeeCCCeEEEEeCCeEEEEECCCC
Q 046773 376 VCRFSLRAD--RNVNVMGCMNQGYALMCVEGVIRVWEVEGG 414 (453)
Q Consensus 376 v~~l~~~~~--~v~~~~~~~~~~~lls~s~~tIrlWD~~tG 414 (453)
+..+..+.. ....+++++++..+++..+++|++|+....
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 241 ISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred EEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 777765433 255778888776544533399999998653
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.42 E-value=1.8e-10 Score=115.85 Aligned_cols=269 Identities=7% Similarity=0.008 Sum_probs=159.7
Q ss_pred EEEecC--CEEEEEe----------CCCcEEEEECCCCeEEEEecCCCCCc-cccccceEEEEEEcCCeEEEEeC--CCC
Q 046773 149 CLTLSD--LYLACGF----------ADGAVRLFDLTTRLHVRTFRPQHSDR-LGQFSRAVSGIIITDSQLIFATL--DGD 213 (453)
Q Consensus 149 ~lafs~--~~LaSGS----------~D~TIrlWD~~tg~~~~tl~gh~~~~-~~~~s~~V~~i~f~g~~LasgS~--D~t 213 (453)
.++|++ ++|..++ .|++|.+||+.+++.++++..+.... .+.....+ ++..+|+.|+.+.. +++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i-~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLF-RQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGE-EECTTSSEEEEEEESSSEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceE-EECCCCCEEEEECCCCCCe
Confidence 677875 5666665 37889999999999998875321100 00111111 13446888887764 688
Q ss_pred EEEEEeecCCcceEEe-eecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCC-CcEE-ecccccCCcceeeeeee
Q 046773 214 IHVAVIDDVANETRTA-HFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQA-EEVF-VGGDLTDHNTVMGWRML 290 (453)
Q Consensus 214 IkvWd~~~~g~~~~~~-~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~t-g~~~-~g~~l~~~~~v~~w~~l 290 (453)
|.|||+++ + ..... .. + .....+.+.|+++. .+++.+.|+++.+|+.+. ++.. ..+. . ..+
T Consensus 133 v~v~d~~~-~-~~~~~~i~--~-~~~~~v~~~p~~~~--~~~~~~~dg~~~~v~~~~~g~~~~~~~~------~---~~~ 196 (361)
T 2oiz_A 133 IGIVDVAK-G-DYVEDVTA--A-AGCWSVIPQPNRPR--SFMTICGDGGLLTINLGEDGKVASQSRS------K---QMF 196 (361)
T ss_dssp EEEEETTT-T-EEEEEEGG--G-TTEEEEEECTTSSS--EEEEEETTSSEEEEEECTTSSEEEEEEC------C---CCS
T ss_pred EEEEECCC-C-cEEEEEec--C-CCcceeEEcCCCCe--eEEEECCCCcEEEEEECCCCcEeeeccc------c---ceE
Confidence 99999987 4 22211 10 0 01112567787743 256788899999999875 5532 1100 0 000
Q ss_pred eeeccceeE-EEEcCCceEEEEcCCcEEEEECCCCceEE--EEe--e----cc----CCeEEEEEEecCCEEEEEeC-CC
Q 046773 291 TEFTEFVGR-VRVTSHESAVACTSSRVITFDLRNQGMVL--GER--G----YG----RGLYVTSVDVNAEAYIVVEN-RE 356 (453)
Q Consensus 291 ~~h~~~v~~-v~~s~~~~~vas~d~tIrlWDl~t~~~~~--~~~--g----~~----~~~~v~~~~~~g~~l~s~s~-dg 356 (453)
.....++.. ..-+++..+..+.+++|.++|+.+.+... ... . .. ......+|+++++.+.++.. ++
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 197 SVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp CTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred cCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 000111100 01122334555566789999997654221 110 0 00 00012478888887766543 22
Q ss_pred cc-cc--CcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCC--eEEEEecccCCce-EEE
Q 046773 357 LE-NQ--NRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGG--EYMYSFRERIGEE-VIA 430 (453)
Q Consensus 357 ~~-~~--~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG--~~l~tL~gh~~~~-V~a 430 (453)
.. .. ...++.+||..+++.+.++..+. ...++++++++++.++..++|.|||++++ +.+.++..+-... ..+
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~ 354 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQ 354 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEE
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCCCcEEEE
Confidence 00 00 12378999999999999988776 88999999999877665599999999999 9999985554441 237
Q ss_pred EecCCC
Q 046773 431 FVGDDR 436 (453)
Q Consensus 431 ~s~d~~ 436 (453)
++|||+
T Consensus 355 ~~p~G~ 360 (361)
T 2oiz_A 355 FHPVGG 360 (361)
T ss_dssp ECCCSC
T ss_pred ecCCCC
Confidence 789986
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.40 E-value=3e-11 Score=131.57 Aligned_cols=239 Identities=13% Similarity=0.029 Sum_probs=141.8
Q ss_pred EEEEEEecC--CEEE-----EEeCCCcEEEEECCCCeEE-EE-ecCCCCCccccccceEEEEEE--cCCeEEEEeCCCC-
Q 046773 146 TCRCLTLSD--LYLA-----CGFADGAVRLFDLTTRLHV-RT-FRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGD- 213 (453)
Q Consensus 146 ~v~~lafs~--~~La-----SGS~D~TIrlWD~~tg~~~-~t-l~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~t- 213 (453)
.+.+++||+ ++|| +|+.+.+|++||+++|+.+ .. +.+ .. ..+++| ||+.|++++.|.+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-~~---------~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG-GK---------YATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC-CT---------TCCCEECTTSSEEEEEECCCCT
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc-cc---------ccceEEecCCCEEEEEEecCCC
Confidence 378889986 5888 6677789999999999865 21 111 10 012444 6789999999887
Q ss_pred ------------EEEEEeecCCc-ceEEeeeccee-cCceEEEEeCCCceeeEEEEeeCCC----eEEEeeCCCCcEEec
Q 046773 214 ------------IHVAVIDDVAN-ETRTAHFGSVM-DDGVLIDFTGCSRYWVGLYAGLAGR----AFHIWDRQAEEVFVG 275 (453)
Q Consensus 214 ------------IkvWd~~~~g~-~~~~~~~~~v~-~~~~~v~Fs~dg~~~~~LaSgS~D~----tIrvWD~~tg~~~~g 275 (453)
|++|++.+ +. .........-. .....+.|||||++ |+..+.++ .|.+||..+++.
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t-~~~~~~lv~~~~~~~~~~~~~~~SpDG~~---l~~~~~~~~~~~~l~~~~~~~~~~--- 264 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGT-EPSKDTVVHERTGDPTTFLQSDLSRDGKY---LFVYILRGWSENDVYWKRPGEKDF--- 264 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTS-CGGGCEEEECCCCCTTCEEEEEECTTSCC---EEEEEEETTTEEEEEEECTTCSSC---
T ss_pred CCccccCCCCCEEEEEECCC-CchhceEEEecCCCCEEEEEEEECCCCCE---EEEEEeCCCCceEEEEEcCCCCce---
Confidence 99999887 31 11111111000 00124789999998 44444444 677777666551
Q ss_pred ccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc----CCcEEEEECCCCce--EEEEeeccCCeEEEEEEecCCE-
Q 046773 276 GDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT----SSRVITFDLRNQGM--VLGERGYGRGLYVTSVDVNAEA- 348 (453)
Q Consensus 276 ~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~----d~tIrlWDl~t~~~--~~~~~g~~~~~~v~~~~~~g~~- 348 (453)
..|..+.+.+....+..+.+++.+. +..|.+||+.+++. ...+..+.....+..++++++.
T Consensus 265 ------------~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~l 332 (695)
T 2bkl_A 265 ------------RLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHL 332 (695)
T ss_dssp ------------EEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEE
T ss_pred ------------EEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEE
Confidence 1222333333333333333444444 36799999988752 1222223323445666666655
Q ss_pred EEEEeCCCccccCcceEEEEEcC-CCeeEEEEEec-CCCeeEEEEeeCCCeEEE-EeC----CeEEEEECCCCeEEEEec
Q 046773 349 YIVVENRELENQNRRLAIVRRVD-TFEEVCRFSLR-ADRNVNVMGCMNQGYALM-CVE----GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 349 l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~l~~~-~~~v~~~~~~~~~~~lls-~s~----~tIrlWD~~tG~~l~tL~ 421 (453)
+++.+.++ ..+||.++ +++.+..+.+. ...+..+.+++++..++. .++ ++|++||+.+|+. ..|.
T Consensus 333 v~~~~~dg-------~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~ 404 (695)
T 2bkl_A 333 SLEYLKDA-------TSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWA 404 (695)
T ss_dssp EEEEEETT-------EEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEE
T ss_pred EEEEEECC-------EEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEe
Confidence 45566777 88888776 46666666655 333455556677766653 222 7999999999874 3443
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.40 E-value=2.2e-10 Score=109.57 Aligned_cols=230 Identities=12% Similarity=0.078 Sum_probs=143.8
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecCC-cceEEeee--cceecCceEEEE-eCCCceeeEEEEee-CCCeEEEee
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDVA-NETRTAHF--GSVMDDGVLIDF-TGCSRYWVGLYAGL-AGRAFHIWD 266 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g-~~~~~~~~--~~v~~~~~~v~F-s~dg~~~~~LaSgS-~D~tIrvWD 266 (453)
...+++++ ++.+++.+.++.|++||.+. . ...+.... ..-......++| +++|+. +++.. .++.|++||
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l---~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDI---IVTERSPTHQIQIYN 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEE---EEEECGGGCEEEEEC
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeE---EEEcCCCCCEEEEEC
Confidence 35667775 56677778899999999764 2 11111100 000011234788 577875 33443 388999999
Q ss_pred CCCCcEEecccccCCcceeeeeee-eeeccceeEEEEcCCceE-EEEc-CCcEEEEECCCCceEEEEe--eccCCeEEEE
Q 046773 267 RQAEEVFVGGDLTDHNTVMGWRML-TEFTEFVGRVRVTSHESA-VACT-SSRVITFDLRNQGMVLGER--GYGRGLYVTS 341 (453)
Q Consensus 267 ~~tg~~~~g~~l~~~~~v~~w~~l-~~h~~~v~~v~~s~~~~~-vas~-d~tIrlWDl~t~~~~~~~~--g~~~~~~v~~ 341 (453)
.+++.+. .+ ..+...+..+++++++.+ ++.. ++.|++||.. ++.+.... ++.....-.+
T Consensus 107 -~~g~~~~--------------~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 107 -QYGQFVR--------------KFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp -TTSCEEE--------------EECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEE
T ss_pred -CCCcEEE--------------EecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEE
Confidence 5565321 01 112245678999987654 4433 4789999975 44444332 2222333455
Q ss_pred EEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC--CCeeEEEEeeCCCeEEEEeC-C-eEEEEECCCCeEE
Q 046773 342 VDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA--DRNVNVMGCMNQGYALMCVE-G-VIRVWEVEGGEYM 417 (453)
Q Consensus 342 ~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~--~~v~~~~~~~~~~~lls~s~-~-tIrlWD~~tG~~l 417 (453)
++++++.+++.+.++ .|++|+.+ ++.+..+.... .....+++++++..+++... + .|++||. +|+.+
T Consensus 171 ~~~~g~l~v~~~~~~-------~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~ 241 (286)
T 1q7f_A 171 VNDKQEIFISDNRAH-------CVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLI 241 (286)
T ss_dssp ECSSSEEEEEEGGGT-------EEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEE
T ss_pred ECCCCCEEEEECCCC-------EEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEE
Confidence 667777666666677 89999974 55566664432 34677888888876666655 5 9999995 68888
Q ss_pred EEecccCCc-eEE--EEecCCCEEEEEeCCcEEEEecC
Q 046773 418 YSFRERIGE-EVI--AFVGDDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 418 ~tL~gh~~~-~V~--a~s~d~~~lasg~D~~IklWDl~ 452 (453)
.++..+... .+. +++|||+.+++..|++|+||++.
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred EEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 888665432 133 67899987776678999999974
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.39 E-value=2.3e-10 Score=124.82 Aligned_cols=233 Identities=12% Similarity=0.112 Sum_probs=146.2
Q ss_pred eEEEEEE--cCCeEEEEeCCC-----CEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCe-----
Q 046773 194 AVSGIII--TDSQLIFATLDG-----DIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRA----- 261 (453)
Q Consensus 194 ~V~~i~f--~g~~LasgS~D~-----tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~t----- 261 (453)
.+.+++| ||++||+++.++ +|+|||+++ | ..+........ ...++|+|||+. |+.++.|.+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t-g-~~~~~~~~~~~--~~~~~wspDg~~---l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-A-KELPDVLERVK--FSCMAWTHDGKG---MFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT-T-EEEEEEEEEEC--SCCEEECTTSSE---EEEEECCCCSSCCS
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC-C-CCCcccccCcc--cceEEEEeCCCE---EEEEEECCcccccc
Confidence 3455555 577898876654 899999988 5 22221111110 113799999997 666777766
Q ss_pred -----------EEEeeCCCCc---EEecccccCCcceeeeeeeeeeccceeEEEEcCCce--EEEEc-----CCcEEEEE
Q 046773 262 -----------FHIWDRQAEE---VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACT-----SSRVITFD 320 (453)
Q Consensus 262 -----------IrvWD~~tg~---~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~-----d~tIrlWD 320 (453)
|++|++.+++ .+.. ....|..++..+.++|++. ++++. +..|.+||
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~-------------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCA-------------EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEE-------------CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred ccccccCCCCEEEEEECCCCcccceEEe-------------ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 9999999876 2210 0112344567788998874 33343 35799999
Q ss_pred CCC------Cc-eEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe--eEEEEEecCC--CeeEE
Q 046773 321 LRN------QG-MVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE--EVCRFSLRAD--RNVNV 389 (453)
Q Consensus 321 l~t------~~-~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~--~v~~l~~~~~--~v~~~ 389 (453)
+.+ +. ....+..+.... ...++++|+.++..+..+. ....+.+|++++++ ....+..+.+ .+..+
T Consensus 266 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~ 341 (710)
T 2xdw_A 266 LQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWV 341 (710)
T ss_dssp GGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEE
T ss_pred CcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCCCCCeEEEE
Confidence 987 42 233343333333 2458899998887765441 12267788888764 2344544433 35556
Q ss_pred EEeeCCCeEEEEe-C---CeEEEEECCCCeEEEEecccCCceEEE--EecCCCEEEE---E--eCCcEEEEecC
Q 046773 390 MGCMNQGYALMCV-E---GVIRVWEVEGGEYMYSFRERIGEEVIA--FVGDDRHVAA---S--CGTNIHLWDFG 452 (453)
Q Consensus 390 ~~~~~~~~lls~s-~---~tIrlWD~~tG~~l~tL~gh~~~~V~a--~s~d~~~las---g--~D~~IklWDl~ 452 (453)
.++ ++++++.+. . ..|++||+.+|++++.|..+.+. |.. ++||++.|+. + ..++|.+||+.
T Consensus 342 ~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~-v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 342 ACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGS-VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp EEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSE-EEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred EEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCce-EEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 555 455555443 3 36788899889998999888666 764 4578876652 2 46789999974
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.38 E-value=1.9e-11 Score=131.20 Aligned_cols=237 Identities=8% Similarity=-0.061 Sum_probs=136.7
Q ss_pred cCCE-EEEEeC-CCcEEEEECC--CCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC----------CCEEE
Q 046773 153 SDLY-LACGFA-DGAVRLFDLT--TRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD----------GDIHV 216 (453)
Q Consensus 153 s~~~-LaSGS~-D~TIrlWD~~--tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D----------~tIkv 216 (453)
++++ ||..+. +..|.+||+. ++...+.|...... ++...+.+++| ||+.|++++.| .+|++
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAV---GGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCS---TTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccC---CCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 3567 776654 4556666665 30445667652100 00113455555 57899999887 57899
Q ss_pred EEeecC-----C-cceEE-eeecceecCceEEEEeCCCceeeEEEEeeCC--------CeEEEeeCC-CC---cEEeccc
Q 046773 217 AVIDDV-----A-NETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAG--------RAFHIWDRQ-AE---EVFVGGD 277 (453)
Q Consensus 217 Wd~~~~-----g-~~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D--------~tIrvWD~~-tg---~~~~g~~ 277 (453)
||+++. + ...+. .+...+ ..++|||||++ ||..+.| .+|.+||++ +| +..
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~SpDG~~---la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~---- 234 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFV----TGPRLSPDGRQ---AVWLAWDHPRMPWEGTELKTARVTEDGRFADTR---- 234 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEE----CCCEECTTSSE---EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE----
T ss_pred EECCCCccccCCceeEEEecCCCcc----cCceECCCCCE---EEEEECCCCCCCCCCcEEEEEEECCCCcccccE----
Confidence 998761 2 22222 222211 13789999997 5555544 479999999 57 311
Q ss_pred ccCCcceeeeeeeeeeccceeEEEEcCCceEEE-Ec-CC--cEEEEECCCCceEEEEeeccCC--------eEEEEEEec
Q 046773 278 LTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVA-CT-SS--RVITFDLRNQGMVLGERGYGRG--------LYVTSVDVN 345 (453)
Q Consensus 278 l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~va-s~-d~--tIrlWDl~t~~~~~~~~g~~~~--------~~v~~~~~~ 345 (453)
....+|...+..+.|+|++.++. ++ ++ .|.+||+.+++......++... ....+++++
T Consensus 235 ----------~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~ 304 (662)
T 3azo_A 235 ----------TLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLAN 304 (662)
T ss_dssp ----------EEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTT
T ss_pred ----------EeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCC
Confidence 11223456788899998875433 33 45 5777787776543222222111 112345567
Q ss_pred CCEEEEEeCCCccccCcceEEEEEc--CCCeeEEEEEecCCCeeEEEEeeCCCeEE-EEeC----CeEEEEECCCCeEEE
Q 046773 346 AEAYIVVENRELENQNRRLAIVRRV--DTFEEVCRFSLRADRNVNVMGCMNQGYAL-MCVE----GVIRVWEVEGGEYMY 418 (453)
Q Consensus 346 g~~l~s~s~dg~~~~~~~~i~Iw~~--~tg~~v~~l~~~~~~v~~~~~~~~~~~ll-s~s~----~tIrlWD~~tG~~l~ 418 (453)
+..+++++. + +++||.+ ++++ +..++.+...+..+. +++++.++ ++++ ..|.+||+.++++..
T Consensus 305 ~~~~~~~~~-~-------~~~l~~~d~~~~~-~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 305 GLIAVVHGK-G-------AAVLGILDPESGE-LVDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp SCEEEEEBS-S-------SCEEEEEETTTTE-EEECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred CEEEEEEEc-C-------ccEEEEEECCCCc-EEEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 777888777 8 8899954 4454 666665554455442 55666554 3332 367777888887654
Q ss_pred Eeccc
Q 046773 419 SFRER 423 (453)
Q Consensus 419 tL~gh 423 (453)
....|
T Consensus 375 l~~~~ 379 (662)
T 3azo_A 375 IGARH 379 (662)
T ss_dssp EESCC
T ss_pred eecCC
Confidence 43444
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.36 E-value=3.8e-11 Score=119.14 Aligned_cols=268 Identities=11% Similarity=-0.015 Sum_probs=143.9
Q ss_pred EEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCC-C--CEEEEEeecCCcceEEeeecceecCceEEEEe
Q 046773 168 LFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLD-G--DIHVAVIDDVANETRTAHFGSVMDDGVLIDFT 244 (453)
Q Consensus 168 lWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D-~--tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs 244 (453)
..|..+|+.++.|..+.......+...+ +++++|+.|++.+.+ + .|.+||+.+ + ...+...+.. .....+.|+
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~-~~SpdG~~l~~~~~~~g~~~l~~~d~~~-~-~~~~l~~~~~-~~~~~~~~s 89 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQK-CFTQDGKKLLFAGDFDGNRNYYLLNLET-Q-QAVQLTEGKG-DNTFGGFIS 89 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSC-CBCTTSCEEEEEECTTSSCEEEEEETTT-T-EEEECCCSSC-BCTTTCEEC
T ss_pred eecCCCCcceEEEecCCCCccceeeecC-cCCCCCCEEEEEEecCCCceEEEEECCC-C-cEEEeecCCC-CccccceEC
Confidence 4588999999888754221000000011 144568888887653 3 466667665 4 2222111110 001125799
Q ss_pred CCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeee---eeeccce-------eEEEEcCCceE--EE--
Q 046773 245 GCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRML---TEFTEFV-------GRVRVTSHESA--VA-- 310 (453)
Q Consensus 245 ~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l---~~h~~~v-------~~v~~s~~~~~--va-- 310 (453)
|||++ |+..+.+..|.+||+.+++...-... +.. |..- ....... ..+.++|++.. ++
T Consensus 90 pdg~~---l~~~~~~~~l~~~d~~~~~~~~~~~~--~~~---~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 90 TDERA---FFYVKNELNLMKVDLETLEEQVIYTV--DEE---WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TTSSE---EEEEETTTEEEEEETTTCCEEEEEEC--CTT---EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred CCCCE---EEEEEcCCcEEEEECCCCCcEEEEec--ccc---cCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 99997 66778888999999999872110000 000 1000 0000000 00123444422 11
Q ss_pred ---EcCCcEEEEECCCCceEEEEeeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC-C-
Q 046773 311 ---CTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA-D- 384 (453)
Q Consensus 311 ---s~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~-~- 384 (453)
..+..|.+||+.+++..... .+.....-..++| +++.++..+.+. .+.....+.+++.++++. ..+..+. .
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~-~~~~~~~l~~~d~~~~~~-~~l~~~~~~~ 238 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGP-HDLVDARMWLVNEDGSNV-RKIKEHAEGE 238 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSC-SSSCSCCCEEEETTSCCC-EESSCCCTTE
T ss_pred ccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCC-CCCCCceEEEEECCCCce-eEeeccCCCc
Confidence 23357999999987653332 2333344456777 677677766533 111112566777765542 2222221 1
Q ss_pred CeeEEEEeeCCCeEEEEeC------CeEEEEECCCCeEEEEecccCCceEEEEec-CCCEEEEE-e--------------
Q 046773 385 RNVNVMGCMNQGYALMCVE------GVIRVWEVEGGEYMYSFRERIGEEVIAFVG-DDRHVAAS-C-------------- 442 (453)
Q Consensus 385 ~v~~~~~~~~~~~lls~s~------~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~-d~~~lasg-~-------------- 442 (453)
.+..+.++|++++++..+. ++|++||+++|+...... ..+. .-+++| |+++|+.+ .
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPPC-SHLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCSE-EEEEECSSSSEEEEEECCC----------CC
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCCC-CCCccCCCCceEEEecCCcceeecccccccc
Confidence 3566788999988776532 349999999986543221 1122 246788 99988864 3
Q ss_pred --CCcEEEEecC
Q 046773 443 --GTNIHLWDFG 452 (453)
Q Consensus 443 --D~~IklWDl~ 452 (453)
+..|.+||+.
T Consensus 317 ~~~~~i~~~d~~ 328 (396)
T 3c5m_A 317 ENDPFLYVLNTK 328 (396)
T ss_dssp CCCCEEEEEETT
T ss_pred CCCCcEEEEecc
Confidence 3679999864
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.36 E-value=3.8e-10 Score=111.62 Aligned_cols=267 Identities=12% Similarity=0.031 Sum_probs=161.6
Q ss_pred eCCCcEEEEECCCCeEEEEecC-CCCCccccccceEEEEEEcCCeEEE-EeCCCCEEEEEeecCC--cceEEeeecceec
Q 046773 161 FADGAVRLFDLTTRLHVRTFRP-QHSDRLGQFSRAVSGIIITDSQLIF-ATLDGDIHVAVIDDVA--NETRTAHFGSVMD 236 (453)
Q Consensus 161 S~D~TIrlWD~~tg~~~~tl~g-h~~~~~~~~s~~V~~i~f~g~~Las-gS~D~tIkvWd~~~~g--~~~~~~~~~~v~~ 236 (453)
+.|++|.++|.+|++..+++.. ......| ....++++++.+|.. ...+++|.++|..+ + +.++.. ..
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg---~~~~~i~~~~~~lyv~~~~~~~v~viD~~t-~~~~~~i~~-----~~ 84 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLG---DVAQSMVIRDGIGWIVVNNSHVIFAIDINT-FKEVGRITG-----FT 84 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCB---SCEEEEEEETTEEEEEEGGGTEEEEEETTT-CCEEEEEEC-----CS
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccC---ccceEEEEECCEEEEEEcCCCEEEEEECcc-cEEEEEcCC-----CC
Confidence 4589999999999998766521 0001111 134567788776544 45578999999987 4 122211 12
Q ss_pred CceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc--CC
Q 046773 237 DGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT--SS 314 (453)
Q Consensus 237 ~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~--d~ 314 (453)
....|+|+++|+. .++...+++|.+||.++++...--.+.. ..+.......+.++.+.++++.. ++
T Consensus 85 ~p~~i~~~~~g~l---yv~~~~~~~v~~iD~~t~~~~~~i~~g~---------~~~~~~~p~~i~~~~~~lyv~~~~~~~ 152 (328)
T 3dsm_A 85 SPRYIHFLSDEKA---YVTQIWDYRIFIINPKTYEITGYIECPD---------MDMESGSTEQMVQYGKYVYVNCWSYQN 152 (328)
T ss_dssp SEEEEEEEETTEE---EEEEBSCSEEEEEETTTTEEEEEEECTT---------CCTTTCBCCCEEEETTEEEEEECTTCC
T ss_pred CCcEEEEeCCCeE---EEEECCCCeEEEEECCCCeEEEEEEcCC---------ccccCCCcceEEEECCEEEEEcCCCCC
Confidence 2235899999863 3344479999999999988321000000 00001123456666666677763 67
Q ss_pred cEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCcc---ccCcceEEEEEcCCCeeEEEEEecC-CCeeEE
Q 046773 315 RVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELE---NQNRRLAIVRRVDTFEEVCRFSLRA-DRNVNV 389 (453)
Q Consensus 315 tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~---~~~~~~i~Iw~~~tg~~v~~l~~~~-~~v~~~ 389 (453)
+|.++|+++++.+.+. .+.. ..-..++++|+.+++...+... .+....+.++|..+++.+..+.... .....+
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~--p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~l 230 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQ--PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEV 230 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSC--BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEE
T ss_pred EEEEEECCCCeEEEEEEcCCC--ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeE
Confidence 9999999998765554 2211 1124567777766554443000 0001278999999998776765432 346788
Q ss_pred EEeeCCCeEEEEeCCeEEEEECCCCeEEEE--ecccCCceEE--EEec-CCCEEEEE-----eCCcEEEEecC
Q 046773 390 MGCMNQGYALMCVEGVIRVWEVEGGEYMYS--FRERIGEEVI--AFVG-DDRHVAAS-----CGTNIHLWDFG 452 (453)
Q Consensus 390 ~~~~~~~~lls~s~~tIrlWD~~tG~~l~t--L~gh~~~~V~--a~s~-d~~~lasg-----~D~~IklWDl~ 452 (453)
+++++++++..+.. +|.+||+++++.... +..+... .. +++| +++..++. .+++|.+||..
T Consensus 231 a~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~-p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 231 QLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTK-YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSC-EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCc-eEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 89998888776554 899999999886422 2211223 44 6778 45555553 36789999853
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.33 E-value=2.6e-10 Score=124.17 Aligned_cols=270 Identities=9% Similarity=-0.051 Sum_probs=152.5
Q ss_pred ecCCEEEEEeCCC---cEEEEEC--CCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEE-----EeCCCCEEEEEe
Q 046773 152 LSDLYLACGFADG---AVRLFDL--TTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIF-----ATLDGDIHVAVI 219 (453)
Q Consensus 152 fs~~~LaSGS~D~---TIrlWD~--~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~Las-----gS~D~tIkvWd~ 219 (453)
.++++++-.+.++ .-.||-+ .+++....+.+.... ..+...+.+++| ||++||. |+.+.+|+|||+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a--~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWS--KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSS--SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhc--cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 5666666665554 3455554 455543333211000 000113555555 5778884 444578999999
Q ss_pred ecCCcceE-EeeecceecCceEEEEeCCCceeeEEEEeeCCCe-------------EEEeeCCCCc---EEecccccCCc
Q 046773 220 DDVANETR-TAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRA-------------FHIWDRQAEE---VFVGGDLTDHN 282 (453)
Q Consensus 220 ~~~g~~~~-~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~t-------------IrvWD~~tg~---~~~g~~l~~~~ 282 (453)
++ | ..+ ..+...+.. ..++|+|||+. |+.++.|.+ |++|++.+++ .+.
T Consensus 155 ~t-g-~~~~~~~~~~~~~--~~~~wspDg~~---l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv-------- 219 (695)
T 2bkl_A 155 DS-G-EWSKVDVIEGGKY--ATPKWTPDSKG---FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV-------- 219 (695)
T ss_dssp TT-C-CBCSSCCBSCCTT--CCCEECTTSSE---EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE--------
T ss_pred CC-C-CCcCCcccCcccc--cceEEecCCCE---EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE--------
Confidence 88 5 222 112221110 24799999996 677788877 9999999876 121
Q ss_pred ceeeeeeeeeeccceeEEEEcCCc--eEEEEcCC----cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCC
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHE--SAVACTSS----RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRE 356 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~----tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg 356 (453)
.....+...+..+.++|++ +++++.++ .|.+||..+++. ..+..+.... ...+.++++ ++..+...
T Consensus 220 -----~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~-~~~~~~~g~-l~~~s~~~ 291 (695)
T 2bkl_A 220 -----HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAK-YEVHAWKDR-FYVLTDEG 291 (695)
T ss_dssp -----ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCC-EEEEEETTE-EEEEECTT
T ss_pred -----EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCce-EEEEecCCc-EEEEECCC
Confidence 1112344567788999887 34444443 577777766542 3332222222 223346777 55544321
Q ss_pred ccccCcceEEEEEcCCCee--EEEEEec-CCC-eeEEEEeeCCCeEEE-EeC-CeEEEEECC-CCeEEEEeccc-CCceE
Q 046773 357 LENQNRRLAIVRRVDTFEE--VCRFSLR-ADR-NVNVMGCMNQGYALM-CVE-GVIRVWEVE-GGEYMYSFRER-IGEEV 428 (453)
Q Consensus 357 ~~~~~~~~i~Iw~~~tg~~--v~~l~~~-~~~-v~~~~~~~~~~~lls-~s~-~tIrlWD~~-tG~~l~tL~gh-~~~~V 428 (453)
..+..+.+|++++++. ...+..+ ++. +..+.++ +++++. ... ++.+||.+. +|++++.+..+ .+. |
T Consensus 292 ---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~-v 365 (695)
T 2bkl_A 292 ---APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGA-A 365 (695)
T ss_dssp ---CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSE-E
T ss_pred ---CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeE-E
Confidence 1123788888877753 2333333 232 4555554 445554 443 777777554 57778888766 444 6
Q ss_pred E--EEecCCCEEE----EE-eCCcEEEEecC
Q 046773 429 I--AFVGDDRHVA----AS-CGTNIHLWDFG 452 (453)
Q Consensus 429 ~--a~s~d~~~la----sg-~D~~IklWDl~ 452 (453)
. +++||++.|+ +. .+++|++||+.
T Consensus 366 ~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 366 SNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp CCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred EEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 5 4568888776 22 56889999974
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.32 E-value=3.4e-10 Score=110.56 Aligned_cols=254 Identities=7% Similarity=-0.022 Sum_probs=153.5
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~ 222 (453)
+.+++|++ ..+++.+.++++++| +++...++.++.. .+.+++++ ++.+++++.++.|.+||.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~- 75 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGL--------QLEGLNFDRQGQLFLLDVFEGNIFKINPET- 75 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCC--------CEEEEEECTTSCEEEEETTTCEEEEECTTT-
T ss_pred cceeeecCCccceeEEeecccCccc---ccceeEEEeccCc--------cccCcEECCCCCEEEEECCCCEEEEEeCCC-
Confidence 56788886 356666889999999 5677777765433 34667775 55666788899999999876
Q ss_pred C-cceEE-eeecceecCceEEEEeCCCceeeEEEEeeCC----CeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccc
Q 046773 223 A-NETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAG----RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEF 296 (453)
Q Consensus 223 g-~~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D----~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~ 296 (453)
+ ...+. .+...+ ..++|+|+|+. +++.+.+ +.|.+||.++++...- +.. ......
T Consensus 76 ~~~~~~~~~~~~~~----~~i~~~~dg~l---~v~~~~~~~~~~~i~~~d~~~~~~~~~--~~~----------~~~~~~ 136 (333)
T 2dg1_A 76 KEIKRPFVSHKANP----AAIKIHKDGRL---FVCYLGDFKSTGGIFAATENGDNLQDI--IED----------LSTAYC 136 (333)
T ss_dssp CCEEEEEECSSSSE----EEEEECTTSCE---EEEECTTSSSCCEEEEECTTSCSCEEE--ECS----------SSSCCC
T ss_pred CcEEEEeeCCCCCc----ceEEECCCCcE---EEEeCCCCCCCceEEEEeCCCCEEEEE--Ecc----------CccCCc
Confidence 4 22221 111111 24899999985 3454555 6899999988772100 000 012246
Q ss_pred eeEEEEcCCceEEE-EcC-------CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEE-eCCCccccCcceEEE
Q 046773 297 VGRVRVTSHESAVA-CTS-------SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVV-ENRELENQNRRLAIV 367 (453)
Q Consensus 297 v~~v~~s~~~~~va-s~d-------~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~-s~dg~~~~~~~~i~I 367 (453)
++.+.+++++.+.. +.. ..|..+|.++++.. ..........-.+++++++.+..+ +.++ .+.+
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~-------~i~~ 208 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PIIQNISVANGIALSTDEKVLWVTETTAN-------RLHR 208 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGT-------EEEE
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE-EeecCCCcccceEECCCCCEEEEEeCCCC-------eEEE
Confidence 78899998875444 332 24555566554432 221111122334567777755444 4456 8899
Q ss_pred EEcCC-CeeEEEE------EecC-CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCC------ceEE--E
Q 046773 368 RRVDT-FEEVCRF------SLRA-DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIG------EEVI--A 430 (453)
Q Consensus 368 w~~~t-g~~v~~l------~~~~-~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~------~~V~--a 430 (453)
|+.++ ++.+..+ .... .....+++++++..+++... +.|.+||. +|+.+.++..+.. . +. +
T Consensus 209 ~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~-~~~~~ 286 (333)
T 2dg1_A 209 IALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLR-STHPQ 286 (333)
T ss_dssp EEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCB-CCEEE
T ss_pred EEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccC-cceEE
Confidence 99864 4333221 1111 23566777788776666655 89999998 5777777754422 3 33 6
Q ss_pred EecCCCEEEEE
Q 046773 431 FVGDDRHVAAS 441 (453)
Q Consensus 431 ~s~d~~~lasg 441 (453)
|+||++.|..+
T Consensus 287 ~~~dg~~L~v~ 297 (333)
T 2dg1_A 287 FIPGTNQLIIC 297 (333)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 77898776433
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=6.3e-10 Score=121.30 Aligned_cols=237 Identities=12% Similarity=0.063 Sum_probs=142.9
Q ss_pred EEEEEEecC--CEEEEEeCCC-----cEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCCC---
Q 046773 146 TCRCLTLSD--LYLACGFADG-----AVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGD--- 213 (453)
Q Consensus 146 ~v~~lafs~--~~LaSGS~D~-----TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~t--- 213 (453)
.+..++||+ ++||.++.++ +|++||+.+|+.+.....+. .+.++++ ||+.|++++.|.+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~---------~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV---------KFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE---------CSCCEEECTTSSEEEEEECCCCSSC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc---------ccceEEEEeCCCEEEEEEECCcccc
Confidence 477888986 5888776554 99999999999876432211 1223555 6788999999877
Q ss_pred -------------EEEEEeecCCc-ceEEeeecceecC-ceEEEEeCCCceeeEEEEeeC-----CCeEEEeeCCC----
Q 046773 214 -------------IHVAVIDDVAN-ETRTAHFGSVMDD-GVLIDFTGCSRYWVGLYAGLA-----GRAFHIWDRQA---- 269 (453)
Q Consensus 214 -------------IkvWd~~~~g~-~~~~~~~~~v~~~-~~~v~Fs~dg~~~~~LaSgS~-----D~tIrvWD~~t---- 269 (453)
|++|++.+ +. .........-... ...+.|||||+++ +..+. +..|.+||+.+
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t-~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l---~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGT-DQSEDILCAEFPDEPKWMGGAELSDDGRYV---LLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTS-CGGGCEEEECCTTCTTCEEEEEECTTSCEE---EEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred ccccccccCCCCEEEEEECCC-CcccceEEeccCCCCeEEEEEEEcCCCCEE---EEEEEccCCCccEEEEEECcccccc
Confidence 99999876 41 1111111100000 1247999999984 33332 67899999987
Q ss_pred --CcEEecccccCCcceeeeeeeeeeccceeEEEEc--CCceEEEEcC----CcEEEEECCCCc--eEEEEeeccCCeEE
Q 046773 270 --EEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT--SHESAVACTS----SRVITFDLRNQG--MVLGERGYGRGLYV 339 (453)
Q Consensus 270 --g~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s--~~~~~vas~d----~tIrlWDl~t~~--~~~~~~g~~~~~~v 339 (453)
++.- +..|..+...+.. .++ ++.+++.+.. ..|.+||+.+++ ....+..+.....+
T Consensus 273 ~~~~~~-------------~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 338 (710)
T 2xdw_A 273 ITGILK-------------WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVL 338 (710)
T ss_dssp SCSSCC-------------CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEE
T ss_pred cCCccc-------------eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeE
Confidence 5200 1223333333333 244 3445555543 359999999864 12333333332345
Q ss_pred EEEEec-CC-EEEEEeCCCccccCcceEEE--EEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEE-EeC----CeEEEEE
Q 046773 340 TSVDVN-AE-AYIVVENRELENQNRRLAIV--RRVDTFEEVCRFSLRADRNVNVMGCMNQGYALM-CVE----GVIRVWE 410 (453)
Q Consensus 340 ~~~~~~-g~-~l~s~s~dg~~~~~~~~i~I--w~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls-~s~----~tIrlWD 410 (453)
..+.+. ++ .+++.+.++ ..+| |++.+|+.+..+.++...+..+.+++++..++. .++ ++|.+||
T Consensus 339 ~~~~~~~~~~lv~~~~~~g-------~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 339 EWVACVRSNFLVLCYLHDV-------KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp EEEEEETTTEEEEEEEETT-------EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred EEEEEEcCCEEEEEEEECC-------EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 555544 44 455566666 5444 566578877888776555666667777766653 333 7999999
Q ss_pred CCCCeE
Q 046773 411 VEGGEY 416 (453)
Q Consensus 411 ~~tG~~ 416 (453)
+.+|++
T Consensus 412 ~~tg~~ 417 (710)
T 2xdw_A 412 LTKEEL 417 (710)
T ss_dssp TTSSSC
T ss_pred CCCCcc
Confidence 999883
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.31 E-value=7.4e-10 Score=106.75 Aligned_cols=221 Identities=7% Similarity=-0.088 Sum_probs=136.0
Q ss_pred EEEEEEc--CC-eEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc
Q 046773 195 VSGIIIT--DS-QLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE 271 (453)
Q Consensus 195 V~~i~f~--g~-~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~ 271 (453)
..+++++ ++ .+++++.++.|..||.++ +...+..+...+ ..++|+|+|+. +++.+.++.|.+||.++|+
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~----~~l~~~~dg~l---~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDG-QLSPEMHPSHHQ----NGHCLNKQGHL---IACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTS-CEEEEESSCSSE----EEEEECTTCCE---EEEETTTTEEEEECSTTCC
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCC-CeEEEECCCCCc----ceeeECCCCcE---EEEecCCCeEEEEcCCCCc
Confidence 4556665 55 677888899999999877 333333322222 24899999985 4455567899999998887
Q ss_pred EEecccccCCcceeeeeeeee-eccceeEEEEcCCceEEEEcC-----------------CcEEEEECCCCceEEEEeec
Q 046773 272 VFVGGDLTDHNTVMGWRMLTE-FTEFVGRVRVTSHESAVACTS-----------------SRVITFDLRNQGMVLGERGY 333 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~-h~~~v~~v~~s~~~~~vas~d-----------------~tIrlWDl~t~~~~~~~~g~ 333 (453)
...- . ....+ ....++.+++++++.+..++. ..-+||.+...+.+.....+
T Consensus 102 ~~~~---~--------~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 170 (296)
T 3e5z_A 102 WESI---A--------DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD 170 (296)
T ss_dssp EEEE---E--------CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC
T ss_pred EEEE---e--------eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecC
Confidence 2110 0 00001 113456789998886555421 12245544432333333222
Q ss_pred cCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC-CCee---EEEEEecCCCeeEEEEeeCCCeEEEEeCCeEEEE
Q 046773 334 GRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD-TFEE---VCRFSLRADRNVNVMGCMNQGYALMCVEGVIRVW 409 (453)
Q Consensus 334 ~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~---v~~l~~~~~~v~~~~~~~~~~~lls~s~~tIrlW 409 (453)
.....-.+++++++.+++.+.++ .|.+|+.+ +++. ...+.........+++.+++..+++. .+.|.+|
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~-------~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~ 242 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDN-------ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVL 242 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTT-------EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEE
T ss_pred CCCCccEEECCCCCEEEEeCCCC-------eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEE
Confidence 22233456788888886656666 88899886 5543 22332223335567888888766655 7889999
Q ss_pred ECCCCeEEEEecccCCceEE-EE-ecCCCEEEEE-eCC
Q 046773 410 EVEGGEYMYSFRERIGEEVI-AF-VGDDRHVAAS-CGT 444 (453)
Q Consensus 410 D~~tG~~l~tL~gh~~~~V~-a~-s~d~~~lasg-~D~ 444 (453)
|.. |+.+..+..+... .. +| .||++.|..+ .++
T Consensus 243 ~~~-g~~~~~~~~~~~~-~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 243 TPD-GDELGRVLTPQTT-SNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp CTT-SCEEEEEECSSCC-CEEEEESTTSCEEEEEETTE
T ss_pred CCC-CCEEEEEECCCCc-eeEEEECCCCCEEEEEcCCe
Confidence 987 8888888766552 22 67 4888888766 553
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.30 E-value=6.9e-10 Score=108.68 Aligned_cols=217 Identities=9% Similarity=0.010 Sum_probs=129.8
Q ss_pred eEEEEEEcCCeEEEEe---------CCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCC---C-
Q 046773 194 AVSGIIITDSQLIFAT---------LDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAG---R- 260 (453)
Q Consensus 194 ~V~~i~f~g~~LasgS---------~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D---~- 260 (453)
.+...+++|+.|++.. .+.+|.+||+++ + ...+. . ....+.|||||++ ||..+.+ +
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l--~----~~~~~~~SpDg~~---la~~~~~~~~~~ 84 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKN-N-ARRFI--E----NATMPRISPDGKK---IAFMRANEEKKV 84 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTT-C-CEEEE--E----SCEEEEECTTSSE---EEEEEEETTTTE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCC-C-ceEEc--c----cCCCeEECCCCCE---EEEEEeccCCCc
Confidence 3455556888887753 255678888876 4 22222 1 1224799999997 4444432 2
Q ss_pred -eEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce--EEEEcC------------------------
Q 046773 261 -AFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACTS------------------------ 313 (453)
Q Consensus 261 -tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~d------------------------ 313 (453)
.|.+||+++++... +..+.. +..++++|++. +.++.+
T Consensus 85 ~~l~~~~~~~g~~~~---------------l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 85 SEIWVADLETLSSKK---------------ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp EEEEEEETTTTEEEE---------------EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred ceEEEEECCCCceEE---------------EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 47888998887321 222233 78899998874 333322
Q ss_pred ---CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcc-eEEEEEcCCCeeEEEEEecCCCeeEE
Q 046773 314 ---SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRR-LAIVRRVDTFEEVCRFSLRADRNVNV 389 (453)
Q Consensus 314 ---~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~-~i~Iw~~~tg~~v~~l~~~~~~v~~~ 389 (453)
..|.+||+.+++.+..+.. . .....+++++| .+++++.+.... ... ..+||.+++++ +..+..+ ..+..+
T Consensus 149 ~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~-~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~ 222 (347)
T 2gop_A 149 GEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIP-QYFKFWDIYIWEDGK-EEKMFEK-VSFYAV 222 (347)
T ss_dssp -CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSC-CSSCCEEEEEEETTE-EEEEEEE-ESEEEE
T ss_pred CccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccc-cccccccEEEeCCCc-eEEeccC-cceeeE
Confidence 4689999998765344332 2 33345667777 555554433100 001 34667666554 3444333 233333
Q ss_pred EEeeCCCeEEEEeC---------CeEEEEECCCCeEEEEecccCCceEE---EEecCCCEEEEE-eCCcEEEEec
Q 046773 390 MGCMNQGYALMCVE---------GVIRVWEVEGGEYMYSFRERIGEEVI---AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 390 ~~~~~~~~lls~s~---------~tIrlWD~~tG~~l~tL~gh~~~~V~---a~s~d~~~lasg-~D~~IklWDl 451 (453)
+|++++++..+. ..|.+|| +|+....+.+|... +. .++ |+ +++++ .|+.++|| +
T Consensus 223 --spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~-~~~~~~~s-dg-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 223 --DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRG-VGQAKIKD-GK-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp --EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSE-EEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred --CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcc-cCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence 889998876653 3688888 77765555566555 54 456 77 77888 89999999 6
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.22 E-value=2.7e-09 Score=103.44 Aligned_cols=208 Identities=9% Similarity=0.051 Sum_probs=136.9
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEeeecce
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTAHFGSV 234 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v 234 (453)
++|++++.|++|.+||.+||+.+.++..+... .
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~------------------------------------~----------- 38 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW------------------------------------E----------- 38 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTC------------------------------------C-----------
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccC------------------------------------C-----------
Confidence 58999999999999999999999888653210 0
Q ss_pred ecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEE--Ec
Q 046773 235 MDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVA--CT 312 (453)
Q Consensus 235 ~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~va--s~ 312 (453)
...++++|+|+. |+ +.++.|..||. +|+.+ |+.-......+.++++.+++.++. +.
T Consensus 39 ---~~~~~~~pdG~i---lv--s~~~~V~~~d~-~G~~~-------------W~~~~~~~~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 39 ---CNSVAATKAGEI---LF--SYSKGAKMITR-DGREL-------------WNIAAPAGCEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp ---CCEEEECTTSCE---EE--ECBSEEEEECT-TSCEE-------------EEEECCTTCEEEEEEECTTSCEEEEEES
T ss_pred ---CcCeEECCCCCE---EE--eCCCCEEEECC-CCCEE-------------EEEcCCCCccccccEECCCCCEEEEecC
Confidence 012567788874 44 45788999998 77743 211111113466777877764333 33
Q ss_pred -CCcEEEEECCCCceEEEEee------ccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCC
Q 046773 313 -SSRVITFDLRNQGMVLGERG------YGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADR 385 (453)
Q Consensus 313 -d~tIrlWDl~t~~~~~~~~g------~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~ 385 (453)
..+|..+|. +|+.+.+... +.....-.++.++|+.+++.+.++ .+..+|.+ |+.+.++... ..
T Consensus 97 ~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~-------~v~~~d~~-G~~~w~~~~~-~~ 166 (276)
T 3no2_A 97 HPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS-------EVREIAPN-GQLLNSVKLS-GT 166 (276)
T ss_dssp TTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT-------EEEEECTT-SCEEEEEECS-SC
T ss_pred CCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC-------EEEEECCC-CCEEEEEECC-CC
Confidence 346666776 5665544321 100111135677889998888888 99999998 9988888654 33
Q ss_pred eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccC--C-c--eEE--EEecCCCEEEEE
Q 046773 386 NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERI--G-E--EVI--AFVGDDRHVAAS 441 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~--~-~--~V~--a~s~d~~~lasg 441 (453)
...+...+++..++++.+ +.|..+|.+||+.+.++..+. + . .+. ++.++|.++++.
T Consensus 167 ~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 167 PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 455666677777777666 789999999999999886431 1 1 133 445788887765
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=5.2e-08 Score=104.29 Aligned_cols=272 Identities=13% Similarity=0.061 Sum_probs=168.1
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCCCCEEEEEee--cCCcceEEee
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLDGDIHVAVID--DVANETRTAH 230 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D~tIkvWd~~--~~g~~~~~~~ 230 (453)
.++++.+.|++|.++|..|++.+.++.... .+..+.| ||+.|+.++.|++|.++|+. + +....+..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---------~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t-~~~v~~i~ 237 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGY---------AVHISRLSASGRYLFVIGRDGKVNMIDLWMKE-PTTVAEIK 237 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSS---------CEEEEEECTTSCEEEEEETTSEEEEEETTSSS-CCEEEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCC---------CccceEECCCCCEEEEEcCCCeEEEEECCCCC-CcEeEEEe
Confidence 477888999999999999999998886322 2234555 57889889999999999985 4 31111111
Q ss_pred ecceecCceEEEEe----CCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc-ceeEEEEcCC
Q 046773 231 FGSVMDDGVLIDFT----GCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE-FVGRVRVTSH 305 (453)
Q Consensus 231 ~~~v~~~~~~v~Fs----~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~-~v~~v~~s~~ 305 (453)
.+. +...++|+ |||+++ +++...+++|.|+|..|.+.+.--.+.. ..+ .....|.. .+..+.++++
T Consensus 238 ~G~---~P~~ia~s~~~~pDGk~l--~v~n~~~~~v~ViD~~t~~~~~~i~~~~-~~~---~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 238 IGS---EARSIETSKMEGWEDKYA--IAGAYWPPQYVIMDGETLEPKKIQSTRG-MTY---DEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp CCS---EEEEEEECCSTTCTTTEE--EEEEEETTEEEEEETTTCCEEEEEECCE-ECT---TTCCEESCCCEEEEEECSS
T ss_pred cCC---CCceeEEccccCCCCCEE--EEEEccCCeEEEEECCCCcEEEEEeccc-ccc---ccccccCCCceEEEEEcCC
Confidence 121 12358999 699982 3445567999999999987432000000 000 00001222 4556666654
Q ss_pred c-e-EEEEc-CCcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeC-CCccccCcceEEEEEcCCCeeEEEEE
Q 046773 306 E-S-AVACT-SSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVEN-RELENQNRRLAIVRRVDTFEEVCRFS 380 (453)
Q Consensus 306 ~-~-~vas~-d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~-dg~~~~~~~~i~Iw~~~tg~~v~~l~ 380 (453)
. . ++... ++.|.+.|..+.+.+... ...+....-..|+++++.+++++. +. .|.++|..+++.+..+.
T Consensus 309 ~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn-------~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 309 RPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARN-------KLVVIDTKEGKLVAIED 381 (567)
T ss_dssp SSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGT-------EEEEEETTTTEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCC-------eEEEEECCCCcEEEEEe
Confidence 3 3 33333 478999999875433221 112222223468888888777653 44 89999999998777665
Q ss_pred e-c--CCCeeEEE-EeeCCCeEEEEe--C-CeEEEEECCC-------CeEEEEecccC-CceEEEEecCCCEEEEE-e--
Q 046773 381 L-R--ADRNVNVM-GCMNQGYALMCV--E-GVIRVWEVEG-------GEYMYSFRERI-GEEVIAFVGDDRHVAAS-C-- 442 (453)
Q Consensus 381 ~-~--~~~v~~~~-~~~~~~~lls~s--~-~tIrlWD~~t-------G~~l~tL~gh~-~~~V~a~s~d~~~lasg-~-- 442 (453)
. . |+-.+... ++|+++.+.+.+ + ++|.++|+.+ -+.++++.+.. +..-..++||+++|-.. .
T Consensus 382 vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 382 TGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp CSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTC
T ss_pred ccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCC
Confidence 4 1 11112333 466656655443 3 8999999998 56788887542 22123568999987544 2
Q ss_pred -----CCcEEEEecC
Q 046773 443 -----GTNIHLWDFG 452 (453)
Q Consensus 443 -----D~~IklWDl~ 452 (453)
.++|-|+|+.
T Consensus 462 ~~~~~~~~v~v~d~~ 476 (567)
T 1qks_A 462 PEAEISGSVAVFDIK 476 (567)
T ss_dssp SSHHHHTCEEEEEGG
T ss_pred CCcccCceEEEEECC
Confidence 3589998864
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.21 E-value=4.9e-09 Score=115.03 Aligned_cols=272 Identities=11% Similarity=0.007 Sum_probs=152.9
Q ss_pred EecCCEEEEEeCCCc---EEEEECC-----CCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEeCC-----CCEE
Q 046773 151 TLSDLYLACGFADGA---VRLFDLT-----TRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFATLD-----GDIH 215 (453)
Q Consensus 151 afs~~~LaSGS~D~T---IrlWD~~-----tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS~D-----~tIk 215 (453)
..++++++-...++. -.||-+. +++...-|....-. .+ ....+.+++| ||++||+++.+ .+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~-~~-~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWA-KD-GATALDAWAASDDGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC------EEEEEEEECTTSSEEEEEEEETTCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhc-cC-CCEEEEeEEECCCCCEEEEEEcCCCCceEEEE
Confidence 366777776665544 5677654 34433222211000 00 0013455555 57889887765 4699
Q ss_pred EEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCe--------------EEEeeCCCCc---EEecccc
Q 046773 216 VAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRA--------------FHIWDRQAEE---VFVGGDL 278 (453)
Q Consensus 216 vWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~t--------------IrvWD~~tg~---~~~g~~l 278 (453)
|||+++ | ..+..+...+.. ..++|+|| +. |+.++.|.+ |.+|++.+++ .+.-
T Consensus 193 v~dl~t-g-~~~~~~~~~~~~--~~~~wspD-~~---l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~--- 261 (741)
T 1yr2_A 193 FVGVAD-G-KPLADELKWVKF--SGLAWLGN-DA---LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF--- 261 (741)
T ss_dssp EEETTT-C-CEEEEEEEEEES--CCCEESTT-SE---EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE---
T ss_pred EEECCC-C-CCCCccCCCcee--ccEEEECC-CE---EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe---
Confidence 999988 5 223222211110 13789999 86 555566554 8999998875 1110
Q ss_pred cCCcceeeeeeeeeeccceeEEEEcCCce--EEEEcC-----CcEEEEECCCC--ceEEEEeeccCCeEEEEEEecCCEE
Q 046773 279 TDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACTS-----SRVITFDLRNQ--GMVLGERGYGRGLYVTSVDVNAEAY 349 (453)
Q Consensus 279 ~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~d-----~tIrlWDl~t~--~~~~~~~g~~~~~~v~~~~~~g~~l 349 (453)
....+...+..+.++|++. ++.+.+ ..|.+||+.++ ++...+..+.... ...++++|+.+
T Consensus 262 ----------~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~dg~~l 330 (741)
T 1yr2_A 262 ----------ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ-WDFVDGVGDQL 330 (741)
T ss_dssp ----------CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC-EEEEEEETTEE
T ss_pred ----------ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce-EEEEeccCCEE
Confidence 0112223567888999883 444433 37999999886 3133333222222 23356899998
Q ss_pred EEEeCCCccccCcceEEEEEcCCC-eeEEEEEecCCC-eeEEEEeeCCCeEEEE-eC-CeEEEEECC-CCeEEEEeccc-
Q 046773 350 IVVENRELENQNRRLAIVRRVDTF-EEVCRFSLRADR-NVNVMGCMNQGYALMC-VE-GVIRVWEVE-GGEYMYSFRER- 423 (453)
Q Consensus 350 ~s~s~dg~~~~~~~~i~Iw~~~tg-~~v~~l~~~~~~-v~~~~~~~~~~~lls~-s~-~tIrlWD~~-tG~~l~tL~gh- 423 (453)
+..+.++. ....+.+|+++++ .....+..+... +..+.++ +++++.+ .. +..+||.+. +|++++.+..+
T Consensus 331 ~~~s~~~~---~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~ 405 (741)
T 1yr2_A 331 WFVSGDGA---PLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG 405 (741)
T ss_dssp EEEECTTC---TTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS
T ss_pred EEEECCCC---CCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC
Confidence 88876541 1225778888875 233444333332 3334433 4555544 33 666666544 57777877654
Q ss_pred CCceEE--EEecCCCEEE----EE-eCCcEEEEecC
Q 046773 424 IGEEVI--AFVGDDRHVA----AS-CGTNIHLWDFG 452 (453)
Q Consensus 424 ~~~~V~--a~s~d~~~la----sg-~D~~IklWDl~ 452 (453)
.+. |. +++||++.|+ +. .+++|.+||+.
T Consensus 406 ~~~-v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 406 IGS-ASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp SCE-EEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred CeE-EEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 444 66 4568887655 22 56899999974
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.16 E-value=3.4e-09 Score=104.45 Aligned_cols=188 Identities=7% Similarity=0.037 Sum_probs=118.8
Q ss_pred EEEEeCCCceeeEEEEeeCC------------------------CeEEEeeCCCCcEEecccccCCcceeeeeeeeeecc
Q 046773 240 LIDFTGCSRYWVGLYAGLAG------------------------RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTE 295 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D------------------------~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~ 295 (453)
.|+|+|+|+. +++.+.+ ++|.+||.++|+.+.. .-.++..
T Consensus 28 ~va~d~~G~l---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-------------~~~~~~~ 91 (329)
T 3fvz_A 28 GVALDSKNNL---VIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS-------------SGKNLFY 91 (329)
T ss_dssp EEEECTTCCE---EEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE-------------ECTTTCS
T ss_pred EEEECCCCCE---EEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec-------------cCCCccC
Confidence 4899999985 4566666 4799999998884320 0012234
Q ss_pred ceeEEEEcCCceE-EEEc-CCcEEEEECCCCc-eEEEEe---------eccCCeEEEEEEe-cCCEEEEEe-CCCccccC
Q 046773 296 FVGRVRVTSHESA-VACT-SSRVITFDLRNQG-MVLGER---------GYGRGLYVTSVDV-NAEAYIVVE-NRELENQN 361 (453)
Q Consensus 296 ~v~~v~~s~~~~~-vas~-d~tIrlWDl~t~~-~~~~~~---------g~~~~~~v~~~~~-~g~~l~s~s-~dg~~~~~ 361 (453)
....|++++++.+ ++.. +++|++||+.... .+.+.. ++-....-.++++ +++.+++.+ .++
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~----- 166 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS----- 166 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC-----
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC-----
Confidence 5678999987744 4433 4789999987542 333331 1111222345666 566677665 466
Q ss_pred cceEEEEEcCCCeeEEEEEecCC----------CeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEecc--cCCce
Q 046773 362 RRLAIVRRVDTFEEVCRFSLRAD----------RNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFRE--RIGEE 427 (453)
Q Consensus 362 ~~~i~Iw~~~tg~~v~~l~~~~~----------~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~g--h~~~~ 427 (453)
.|++|+ .+|+.+..+..... ....++++++++.+..+. . +.|++||..+|+++.++.. +...
T Consensus 167 --~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~- 242 (329)
T 3fvz_A 167 --RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRN- 242 (329)
T ss_dssp --EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC-
T ss_pred --eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCC-
Confidence 888888 56766666643222 256788888856665554 4 8999999999999998843 3344
Q ss_pred EE--EEec------CCCEEEEE-eCCcEEEEecC
Q 046773 428 VI--AFVG------DDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 428 V~--a~s~------d~~~lasg-~D~~IklWDl~ 452 (453)
+. +++| +++..++. .+.+|++||+.
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~ 276 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS 276 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC
Confidence 55 5567 33333333 45689999853
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.15 E-value=2.3e-08 Score=96.19 Aligned_cols=228 Identities=8% Similarity=-0.064 Sum_probs=138.1
Q ss_pred EEEEEecC--C-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeec
Q 046773 147 CRCLTLSD--L-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDD 221 (453)
Q Consensus 147 v~~lafs~--~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~ 221 (453)
..+++|++ + +++++..+++|.+||..++ .+.+..+.. .+.+++++ |+.+++.+.++.|.+||..+
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~--------~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSH--------HQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCS--------SEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCC--------CcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 57888875 5 7899999999999999998 566654322 46678875 56666666678899999866
Q ss_pred CC-cceEEee-ecceecCceEEEEeCCCceeeEEEE----eeC-------------CCeEEEeeCCCCcEEecccccCCc
Q 046773 222 VA-NETRTAH-FGSVMDDGVLIDFTGCSRYWVGLYA----GLA-------------GRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 222 ~g-~~~~~~~-~~~v~~~~~~v~Fs~dg~~~~~LaS----gS~-------------D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
| ...+... .+........++|+|+|+. +++ |+. .+.|..+|.. ++..
T Consensus 100 -g~~~~~~~~~~~~~~~~~~~i~~d~~G~l---~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~--------- 165 (296)
T 3e5z_A 100 -GEWESIADSFEGKKLNSPNDVCLAPDGSL---WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS--------- 165 (296)
T ss_dssp -CCEEEEECEETTEECCCCCCEEECTTSCE---EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE---------
T ss_pred -CcEEEEeeccCCCCCCCCCCEEECCCCCE---EEECCccccccccccccccccCCCcEEEEECCC-CCEE---------
Confidence 4 2222111 1111111123899999986 445 331 2234444443 4421
Q ss_pred ceeeeeeeeeeccceeEEEEcCCceE-EEEc-CCcEEEEECC-CCce-E--EEEeeccCCeEEEEEEecCCEEEEEeCCC
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHESA-VACT-SSRVITFDLR-NQGM-V--LGERGYGRGLYVTSVDVNAEAYIVVENRE 356 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~~~-vas~-d~tIrlWDl~-t~~~-~--~~~~g~~~~~~v~~~~~~g~~l~s~s~dg 356 (453)
.+..+....+.++|+|++.. ++.. +++|.+||+. ++.. . .....+.....-.+++++|+.+++. ++
T Consensus 166 ------~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~ 237 (296)
T 3e5z_A 166 ------APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GD 237 (296)
T ss_dssp ------EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TT
T ss_pred ------EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CC
Confidence 12233355678999988743 3333 4789999997 4443 1 1111111111124677778766554 66
Q ss_pred ccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEe-eCCCeEEEEeCCeEEEEECCCCe
Q 046773 357 LENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGC-MNQGYALMCVEGVIRVWEVEGGE 415 (453)
Q Consensus 357 ~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~-~~~~~lls~s~~tIrlWD~~tG~ 415 (453)
.|.+|+.+ ++.+..+..... +..+++. ++++.+.+++.+.+--.++++.+
T Consensus 238 -------~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 238 -------GVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp -------EEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred -------eEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 88899886 777777776555 7778884 67777777766544445666644
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.15 E-value=2.2e-08 Score=98.80 Aligned_cols=235 Identities=10% Similarity=0.010 Sum_probs=143.0
Q ss_pred EEEEEecCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE-cCCeEEEEe-CCCCEEEEEeecCC
Q 046773 147 CRCLTLSDL-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII-TDSQLIFAT-LDGDIHVAVIDDVA 223 (453)
Q Consensus 147 v~~lafs~~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f-~g~~LasgS-~D~tIkvWd~~~~g 223 (453)
...++++++ ..++...+++|.+||+.|++.++++.... ....|++ .+.+|..+. .+++|.++|..+ +
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~---------~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-~ 115 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT---------SPRYIHFLSDEKAYVTQIWDYRIFIINPKT-Y 115 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS---------SEEEEEEEETTEEEEEEBSCSEEEEEETTT-T
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC---------CCcEEEEeCCCeEEEEECCCCeEEEEECCC-C
Confidence 567778775 55666678999999999999999985321 3456776 333554444 789999999877 4
Q ss_pred cceE-Eeeecce---ecCceEEEEeCCCceeeEEEEee-CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecccee
Q 046773 224 NETR-TAHFGSV---MDDGVLIDFTGCSRYWVGLYAGL-AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVG 298 (453)
Q Consensus 224 ~~~~-~~~~~~v---~~~~~~v~Fs~dg~~~~~LaSgS-~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~ 298 (453)
... +...+.- ......+++ .+++. +++.. .+++|.++|+++++... ++.. .....
T Consensus 116 -~~~~~i~~g~~~~~~~~p~~i~~-~~~~l---yv~~~~~~~~v~viD~~t~~~~~--------------~i~~-g~~p~ 175 (328)
T 3dsm_A 116 -EITGYIECPDMDMESGSTEQMVQ-YGKYV---YVNCWSYQNRILKIDTETDKVVD--------------ELTI-GIQPT 175 (328)
T ss_dssp -EEEEEEECTTCCTTTCBCCCEEE-ETTEE---EEEECTTCCEEEEEETTTTEEEE--------------EEEC-SSCBC
T ss_pred -eEEEEEEcCCccccCCCcceEEE-ECCEE---EEEcCCCCCEEEEEECCCCeEEE--------------EEEc-CCCcc
Confidence 111 1111110 001112566 34442 23333 48999999999988431 1111 12235
Q ss_pred EEEEcCCceE-EEEc-C----------CcEEEEECCCCceEEEEe-eccCCeEEEEEEecCCEEEEEeCCCccccCcceE
Q 046773 299 RVRVTSHESA-VACT-S----------SRVITFDLRNQGMVLGER-GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 299 ~v~~s~~~~~-vas~-d----------~tIrlWDl~t~~~~~~~~-g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i 365 (453)
.+++++++.+ +++. + ++|.++|+++++...+.. ..+....-.+++++++.+..+. . ++
T Consensus 176 ~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~--~-------~v 246 (328)
T 3dsm_A 176 SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN--N-------DI 246 (328)
T ss_dssp CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES--S-------SE
T ss_pred ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc--c-------EE
Confidence 6788887654 3333 2 579999999987554432 1111223356677777776643 2 67
Q ss_pred EEEEcCCCeeEEE--EEecCCCeeEEEEeeCCCeEEEEe-----C-CeEEEEECCCCeEEEEec
Q 046773 366 IVRRVDTFEEVCR--FSLRADRNVNVMGCMNQGYALMCV-----E-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 366 ~Iw~~~tg~~v~~--l~~~~~~v~~~~~~~~~~~lls~s-----~-~tIrlWD~~tG~~l~tL~ 421 (453)
.++|.++++.... +.........++++|+++.+..+. . ++|.+||.. |+.+.+++
T Consensus 247 ~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 247 WRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 7888888764211 111123356778888666665554 4 899999998 99988875
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.15 E-value=1.7e-07 Score=94.84 Aligned_cols=250 Identities=9% Similarity=-0.060 Sum_probs=147.7
Q ss_pred cEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEe----------CCCCEEEEEeecCCcceEEeeec--
Q 046773 165 AVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFAT----------LDGDIHVAVIDDVANETRTAHFG-- 232 (453)
Q Consensus 165 TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS----------~D~tIkvWd~~~~g~~~~~~~~~-- 232 (453)
+|.++|..|++.+.++..... + .+ .+++|++.|+.+. .+++|.++|..+ +...-+...+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~----p---~i-~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-~~~~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFL----P---NP-VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-FLPIADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEEEEecCCCC----C---Ce-EECCCCCEEEEEeccccccccCCCCCeEEEEECCC-CcEEEEEECCCc
Confidence 899999999999888863211 1 11 1445677777664 367899999876 3111111111
Q ss_pred -ce--ecCceEEEEeCCCceeeEEEEeeC--CCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC---
Q 046773 233 -SV--MDDGVLIDFTGCSRYWVGLYAGLA--GRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--- 304 (453)
Q Consensus 233 -~v--~~~~~~v~Fs~dg~~~~~LaSgS~--D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--- 304 (453)
.. ......++|+|||++ |+.++. +.+|.++| ++++... ++.... .++.+.+
T Consensus 119 ~~~~~g~~p~~~~~spDG~~---l~v~n~~~~~~v~viD-~t~~~~~--------------~~i~~~---~~~~~~~~~~ 177 (373)
T 2mad_H 119 PRFDVGPYSWMNANTPNNAD---LLFFQFAAGPAVGLVV-QGGSSDD--------------QLLSSP---TCYHIHPGAP 177 (373)
T ss_pred cccccCCCccceEECCCCCE---EEEEecCCCCeEEEEE-CCCCEEe--------------EEcCCC---ceEEEEeCCC
Confidence 00 011124799999998 555553 58899999 9988431 000000 1233322
Q ss_pred CceEEEEcCCcEEEEECCCCceEEEEe------eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe--eE
Q 046773 305 HESAVACTSSRVITFDLRNQGMVLGER------GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE--EV 376 (453)
Q Consensus 305 ~~~~vas~d~tIrlWDl~t~~~~~~~~------g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~--~v 376 (453)
+..++.+.|+++.++|+ +++...... +...-.....+..++..++..+..+ .+.+.|+.+.+ .+
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~v~vid~~~~~~~v~ 249 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSG-------KILQADISAAGATNK 249 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCc-------eEEEEeccCCcceEe
Confidence 22345567899999999 876542210 1000001123556666665556666 66666665432 11
Q ss_pred EEEE----------ecCCCeeEEEEeeCCCeEEEEe-----------CCeEEEEECCCCeEEEEecccCCceEEEEecCC
Q 046773 377 CRFS----------LRADRNVNVMGCMNQGYALMCV-----------EGVIRVWEVEGGEYMYSFRERIGEEVIAFVGDD 435 (453)
Q Consensus 377 ~~l~----------~~~~~v~~~~~~~~~~~lls~s-----------~~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~ 435 (453)
..+. +.|...+.+.++++++++..+. +++|.+.|++|++.+.++.......--+|+||+
T Consensus 250 ~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg 329 (373)
T 2mad_H 250 APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDG 329 (373)
T ss_pred eeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCC
Confidence 2221 2344445577788888766543 158999999999999988643222122789999
Q ss_pred C-EEEEE--eCCcEEEEecC
Q 046773 436 R-HVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 436 ~-~lasg--~D~~IklWDl~ 452 (453)
+ ++.++ .+++|.++|+.
T Consensus 330 ~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 330 GPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CeEEEEEcCCCCeEEEEECC
Confidence 9 67666 48999999974
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.13 E-value=7.4e-09 Score=100.39 Aligned_cols=175 Identities=10% Similarity=0.063 Sum_probs=120.5
Q ss_pred EEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeec-cceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEe
Q 046773 253 LYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFT-EFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGER 331 (453)
Q Consensus 253 LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~-~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~ 331 (453)
|++++.|+.|.+||.+||+.+ |. +..+. ..+.++.++|++.++.+.+..|..||. +++.+.+..
T Consensus 8 lv~~~~~~~v~~~d~~tG~~~-------------w~-~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 8 LVGGSGWNKIAIINKDTKEIV-------------WE-YPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp EEECTTCSEEEEEETTTTEEE-------------EE-EECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEE
T ss_pred EEeeCCCCEEEEEECCCCeEE-------------EE-eCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEc
Confidence 789999999999999999953 22 11221 346788899988777777889999999 787766653
Q ss_pred ec-cCCeEEEEEEecCCEEEEEeC-CCccccCcceEEEEEcCCCeeEEEEEecCC------CeeEEEEeeCCCeEEEEeC
Q 046773 332 GY-GRGLYVTSVDVNAEAYIVVEN-RELENQNRRLAIVRRVDTFEEVCRFSLRAD------RNVNVMGCMNQGYALMCVE 403 (453)
Q Consensus 332 g~-~~~~~v~~~~~~g~~l~s~s~-dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~------~v~~~~~~~~~~~lls~s~ 403 (453)
.+ ........+.++|+.+++.+. .+ .+..++. +|+.+.++..... ..+.+...+++.++++...
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~-------~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPS-------TILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTE-------EEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT
T ss_pred CCCCccccccEECCCCCEEEEecCCCC-------EEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC
Confidence 32 122333456678888887766 44 4433443 6777777764321 1334455678888877776
Q ss_pred -CeEEEEECCCCeEEEEecccCCceEEEEecCCCEEEEE-eCCcEEEEec
Q 046773 404 -GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 404 -~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~lasg-~D~~IklWDl 451 (453)
+.|..||.+ |+.+.++..+....-..+.+++++|+++ .++.|..+|.
T Consensus 145 ~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 145 TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp TTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 999999998 9999998754322112556899998887 6667877765
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.08 E-value=1.1e-06 Score=83.05 Aligned_cols=263 Identities=8% Similarity=-0.056 Sum_probs=152.8
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~ 222 (453)
+.++++++ ++.++...++.|.+||.. ++.. .+..... ...+.+++++ |...++...++.|..||.+.
T Consensus 17 ~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g- 87 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTP------DAKVMCLTISSDGEVWFTENAANKIGRITKKG- 87 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSST------TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-
T ss_pred ccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcc------cCceeeEEECCCCCEEEeCCCCCeEEEECCCC-
Confidence 78899875 566666668999999998 6543 3321100 0246778876 45555555577888887652
Q ss_pred CcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEE
Q 046773 223 ANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRV 302 (453)
Q Consensus 223 g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~ 302 (453)
....+...... .....++++|+|+. +++.+.++.|.+||. +++... ..+......+..+++
T Consensus 88 ~~~~~~~~~~~--~~~~~i~~~~~g~l---~v~~~~~~~i~~~d~-~g~~~~-------------~~~~~~~~~~~~i~~ 148 (299)
T 2z2n_A 88 IIKEYTLPNPD--SAPYGITEGPNGDI---WFTEMNGNRIGRITD-DGKIRE-------------YELPNKGSYPSFITL 148 (299)
T ss_dssp CEEEEECSSTT--CCEEEEEECTTSCE---EEEETTTTEEEEECT-TCCEEE-------------EECSSTTCCEEEEEE
T ss_pred cEEEEeCCCcC--CCceeeEECCCCCE---EEEecCCceEEEECC-CCCEEE-------------ecCCCCCCCCceEEE
Confidence 12222211000 11224889999985 345556789999998 665211 001112245678889
Q ss_pred cCCce-EEEEc-CCcEEEEECCCCceEEE-EeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 303 TSHES-AVACT-SSRVITFDLRNQGMVLG-ERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 303 s~~~~-~vas~-d~tIrlWDl~t~~~~~~-~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
++++. .++.. ++.|..+|+ +++.... .........-.+++++++.+++...++ .+.+++. +++. ..+
T Consensus 149 ~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-------~i~~~~~-~g~~-~~~ 218 (299)
T 2z2n_A 149 GSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGN-------KIGRITT-SGEI-TEF 218 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT-------EEEEECT-TCCE-EEE
T ss_pred cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCc-------eEEEECC-CCcE-EEE
Confidence 87764 44443 468999999 6654322 111122222344566666666554556 7888887 6653 333
Q ss_pred Eec--CCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEE-EecccCCceEE--EEecCCCEEEEEeCCcEEEEe
Q 046773 380 SLR--ADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMY-SFRERIGEEVI--AFVGDDRHVAASCGTNIHLWD 450 (453)
Q Consensus 380 ~~~--~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~-tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWD 450 (453)
... ...+..+++.+++...++... +.|.+||. +|+... .+.++... +. ++ +++++.++...+.|..+|
T Consensus 219 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~-~~~i~~-~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAE-PHGICF-DGETIWFAMECDKIGKLT 292 (299)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCC-EEEEEE-CSSCEEEEETTTEEEEEE
T ss_pred ECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCc-cceEEe-cCCCEEEEecCCcEEEEE
Confidence 222 244677888878775555444 89999999 565432 23444444 55 55 888877766334454444
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.07 E-value=4.5e-08 Score=107.27 Aligned_cols=240 Identities=10% Similarity=0.066 Sum_probs=139.3
Q ss_pred EEEEEEecC--CEEEEEeCC-----CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcC-CeEEEEeCCCC----
Q 046773 146 TCRCLTLSD--LYLACGFAD-----GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD-SQLIFATLDGD---- 213 (453)
Q Consensus 146 ~v~~lafs~--~~LaSGS~D-----~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g-~~LasgS~D~t---- 213 (453)
.+..++||+ ++||.++.+ .+|++||+++|+.+.... +.. .+.++++++ +.|++++.|.+
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~--------~~~~~~wspD~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWV--------KFSGLAWLGNDALLYSRFAEPKEGQ 234 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEE--------ESCCCEESTTSEEEEEECCCC----
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCc--------eeccEEEECCCEEEEEEecCccccc
Confidence 367888886 588877655 579999999999865321 110 112345532 67888888775
Q ss_pred ----------EEEEEeecCCc-ceEEeeecceec-CceEEEEeCCCceeeEEEEeeC-----CCeEEEeeCCCC--cEEe
Q 046773 214 ----------IHVAVIDDVAN-ETRTAHFGSVMD-DGVLIDFTGCSRYWVGLYAGLA-----GRAFHIWDRQAE--EVFV 274 (453)
Q Consensus 214 ----------IkvWd~~~~g~-~~~~~~~~~v~~-~~~~v~Fs~dg~~~~~LaSgS~-----D~tIrvWD~~tg--~~~~ 274 (453)
|++|++.+ +. .........-.. ....+.|||||+++ +..+. ...|.+||++++ +.+
T Consensus 235 ~~~~~~~~~~v~~~~lgt-~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l---~~~~~~~~~~~~~l~~~d~~~~~~~~~- 309 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGT-PQSADQPVFATPELPKRGHGASVSSDGRWV---VITSSEGTDPVNTVHVARVTNGKIGPV- 309 (741)
T ss_dssp ----CCCCCEEEEEETTS-CGGGCEEEECCTTCTTCEEEEEECTTSCEE---EEEEECTTCSCCEEEEEEEETTEECCC-
T ss_pred ccccCCCCCEEEEEECCC-CchhCEEEeccCCCCeEEEEEEECCCCCEE---EEEEEccCCCcceEEEEECCCCCCccc-
Confidence 77888765 31 111111110000 01247899999983 33333 348999999877 201
Q ss_pred cccccCCcceeeeeeeeeeccceeE-EEEcCCceEEEEcC----CcEEEEECCCCc-eEEEEeeccCCeEEEEEEecCCE
Q 046773 275 GGDLTDHNTVMGWRMLTEFTEFVGR-VRVTSHESAVACTS----SRVITFDLRNQG-MVLGERGYGRGLYVTSVDVNAEA 348 (453)
Q Consensus 275 g~~l~~~~~v~~w~~l~~h~~~v~~-v~~s~~~~~vas~d----~tIrlWDl~t~~-~~~~~~g~~~~~~v~~~~~~g~~ 348 (453)
..|..+.+.+.. +.-+++.+++.+.+ ..|.+||+.++. ....+..+... .+..++++++.
T Consensus 310 -------------~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~ 375 (741)
T 1yr2_A 310 -------------TALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNR 375 (741)
T ss_dssp -------------EEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTE
T ss_pred -------------EEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCE
Confidence 112222222222 22234445555543 359999998852 33333222222 35566666665
Q ss_pred -EEEEeCCCccccCcceEEEEEcC-CCeeEEEEEec-CCCeeEEEEeeCCCeEEE-EeC----CeEEEEECCCCeEEEEe
Q 046773 349 -YIVVENRELENQNRRLAIVRRVD-TFEEVCRFSLR-ADRNVNVMGCMNQGYALM-CVE----GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 349 -l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v~~l~~~-~~~v~~~~~~~~~~~lls-~s~----~tIrlWD~~tG~~l~tL 420 (453)
+++.+.++ ..+||.++ +++.+..+.+. ...+..+.+++++..++. .++ ++|.+||+.+|+ +..|
T Consensus 376 lv~~~~~dg-------~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l 447 (741)
T 1yr2_A 376 LFASYIHDA-------KSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPW 447 (741)
T ss_dssp EEEEEEETT-------EEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEEC
T ss_pred EEEEEEECC-------EEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEE
Confidence 45566677 77888766 46666666653 333556667777766552 222 899999999987 3444
Q ss_pred c
Q 046773 421 R 421 (453)
Q Consensus 421 ~ 421 (453)
.
T Consensus 448 ~ 448 (741)
T 1yr2_A 448 E 448 (741)
T ss_dssp S
T ss_pred e
Confidence 3
No 195
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.05 E-value=2.2e-07 Score=92.54 Aligned_cols=272 Identities=10% Similarity=0.058 Sum_probs=159.7
Q ss_pred EEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcce
Q 046773 147 CRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANET 226 (453)
Q Consensus 147 v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~ 226 (453)
......++..|..++.|+.|..+|.+||+.+..+..... . .......+..++.++.|+.|..+|..+ |...
T Consensus 96 ~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~-~-------~~~p~~~~~~v~v~~~~g~l~~~d~~t-G~~~ 166 (376)
T 3q7m_A 96 SGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE-A-------LSRPVVSDGLVLIHTSNGQLQALNEAD-GAVK 166 (376)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC-C-------CSCCEEETTEEEEECTTSEEEEEETTT-CCEE
T ss_pred ccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc-e-------EcCCEEECCEEEEEcCCCeEEEEECCC-CcEE
Confidence 345667788888899999999999999999877654221 1 011234466888889999999888876 5111
Q ss_pred EEeeec-ceec--CceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEc
Q 046773 227 RTAHFG-SVMD--DGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT 303 (453)
Q Consensus 227 ~~~~~~-~v~~--~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s 303 (453)
.+.... .... ........ ++. |+.++.++.|..+|.++|+.+.-.....+... ..+....+......+.
T Consensus 167 W~~~~~~~~~~~~~~~~~~~~-~~~----v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~---~~~~~~~~~~~~p~~~ 238 (376)
T 3q7m_A 167 WTVNLDMPSLSLRGESAPTTA-FGA----AVVGGDNGRVSAVLMEQGQMIWQQRISQATGS---TEIDRLSDVDTTPVVV 238 (376)
T ss_dssp EEEECCC-----CCCCCCEEE-TTE----EEECCTTTEEEEEETTTCCEEEEEECCC--------------CCCCCCEEE
T ss_pred EEEeCCCCceeecCCCCcEEE-CCE----EEEEcCCCEEEEEECCCCcEEEEEecccCCCC---cccccccccCCCcEEE
Confidence 111110 0000 00011112 232 56788899999999999984311000000000 0000000000111233
Q ss_pred CCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC
Q 046773 304 SHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA 383 (453)
Q Consensus 304 ~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~ 383 (453)
.+.+++++.++.+..+|+++|+.+..... .. ...+..+++.+..++.++ .+..+|..+|+.+......+
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~--~~~~~~~~~~l~~~~~~g-------~l~~~d~~tG~~~w~~~~~~ 307 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GS--VNDFIVDGNRIYLVDQND-------RVMALTIDGGVTLWTQSDLL 307 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CC--EEEEEEETTEEEEEETTC-------CEEEEETTTCCEEEEECTTT
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CC--CCCceEECCEEEEEcCCC-------eEEEEECCCCcEEEeecccC
Confidence 44456666678999999999986654321 11 234555688888888888 88999999998776654211
Q ss_pred C-CeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE-E-EecCCCEEEEE-eCCcEEEEe
Q 046773 384 D-RNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI-A-FVGDDRHVAAS-CGTNIHLWD 450 (453)
Q Consensus 384 ~-~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~-a-~s~d~~~lasg-~D~~IklWD 450 (453)
. .....+. .++.+..++. +.|.++|.++|+.+..++..... +. . +..++ .|..+ .|+.|..+|
T Consensus 308 ~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~-~~~~~~~~~~-~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 308 HRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSG-FQTEPVAADG-KLLIQAKDGTVYSIT 375 (376)
T ss_dssp TSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTC-BCSCCEEETT-EEEEEBTTSCEEEEE
T ss_pred CCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCc-ceeCCEEECC-EEEEEeCCCEEEEEe
Confidence 1 1112221 3566766666 89999999999998877643333 32 1 12344 45445 899999887
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.05 E-value=4.6e-08 Score=92.06 Aligned_cols=229 Identities=8% Similarity=-0.027 Sum_probs=133.5
Q ss_pred EEEEEEc--CCeEE-EEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc
Q 046773 195 VSGIIIT--DSQLI-FATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE 271 (453)
Q Consensus 195 V~~i~f~--g~~La-sgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~ 271 (453)
..+++++ |+..+ +.+.++.|.+||..+ +......... . .....|+|+++|+. +++.. ++.|.+||..++.
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~-~~~~~~~~~~-~-~~p~~i~~~~~g~l---~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGS-TGTTVLPFNG-L-YQPQGLAVDGAGTV---YVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCS-C-CSCCCEEECTTCCE---EEEET-TTEEEEECTTCSC
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCC-cccceEeeCC-c-CCcceeEECCCCCE---EEEcC-CCEEEEEeCCCce
Confidence 4567775 45455 336788899988655 2111110111 0 11124899999985 23434 8899999987765
Q ss_pred EEecccccCCcceeeeeeeeeeccceeEEEEcCCce-EEEEc-CCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEE
Q 046773 272 VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-AVACT-SSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAY 349 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-~vas~-d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l 349 (453)
...- ..........+++++++. .++.. ++.|.+||..+...............-.+++++++.+
T Consensus 99 ~~~~--------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 99 QTVL--------------PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVY 164 (270)
T ss_dssp CEEC--------------CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEE
T ss_pred Eeee--------------ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEE
Confidence 2110 001113467889987764 44443 4789999877654332211111112224567778766
Q ss_pred EEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceE
Q 046773 350 IVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEV 428 (453)
Q Consensus 350 ~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V 428 (453)
++...++ .|.+++.++................+++.+++...++... +.|.+||..+.........+... +
T Consensus 165 v~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-p 236 (270)
T 1rwi_B 165 VTDTDNN-------RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT-P 236 (270)
T ss_dssp EEEGGGT-------EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC-E
T ss_pred EEECCCC-------EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCC-c
Confidence 6655566 8888888765433221111134667777777754444444 89999999876544333333334 4
Q ss_pred E--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 429 I--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 429 ~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
. ++.+||+..++. .+++|+++++.
T Consensus 237 ~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred eeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 4 567899987887 89999999864
No 197
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.04 E-value=2.3e-07 Score=90.24 Aligned_cols=221 Identities=11% Similarity=0.090 Sum_probs=131.8
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCC----CCEEEEE
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLD----GDIHVAV 218 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D----~tIkvWd 218 (453)
+.+++|++ +++++++.++.|.+||+++++..+.+..+. ..+.+++++ |+.+++...+ +.|.+||
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK--------ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS--------SSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC--------CCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 57888875 577889999999999999998765543222 146778886 5556665555 5788998
Q ss_pred eecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeC------CCeEEEeeCCCCcEEecccccCCcceeeeeeee
Q 046773 219 IDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLA------GRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 219 ~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~------D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~ 291 (453)
.++ + ...+...... ......++|+|+|+.+ ++.+. ...|..+|.++++.. .+.
T Consensus 119 ~~~-~~~~~~~~~~~~-~~~~~~i~~d~~g~l~---v~~~~~~~~~~~~~l~~~~~~~~~~~---------------~~~ 178 (333)
T 2dg1_A 119 ENG-DNLQDIIEDLST-AYCIDDMVFDSKGGFY---FTDFRGYSTNPLGGVYYVSPDFRTVT---------------PII 178 (333)
T ss_dssp TTS-CSCEEEECSSSS-CCCEEEEEECTTSCEE---EEECCCBTTBCCEEEEEECTTSCCEE---------------EEE
T ss_pred CCC-CEEEEEEccCcc-CCcccceEECCCCCEE---EEeccccccCCCceEEEEeCCCCEEE---------------Eee
Confidence 776 3 2211110000 0111248999999863 34332 244555565555521 111
Q ss_pred eeccceeEEEEcCCc--eEEEEc-CCcEEEEECCC-CceEEEE------eeccC-CeEEEEEEecCCEEEEEeCCCcccc
Q 046773 292 EFTEFVGRVRVTSHE--SAVACT-SSRVITFDLRN-QGMVLGE------RGYGR-GLYVTSVDVNAEAYIVVENRELENQ 360 (453)
Q Consensus 292 ~h~~~v~~v~~s~~~--~~vas~-d~tIrlWDl~t-~~~~~~~------~g~~~-~~~v~~~~~~g~~l~s~s~dg~~~~ 360 (453)
.....++.+++++++ ++++.. ++.|.+||+++ ++.+... ....+ ...-.+++++|+.+++...++
T Consensus 179 ~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~---- 254 (333)
T 2dg1_A 179 QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG---- 254 (333)
T ss_dssp EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT----
T ss_pred cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC----
Confidence 222456788999886 344443 57899999974 3322111 11111 112245566777777666667
Q ss_pred CcceEEEEEcCCCeeEEEEEecCC------CeeEEEEeeCCCeEEEEeC
Q 046773 361 NRRLAIVRRVDTFEEVCRFSLRAD------RNVNVMGCMNQGYALMCVE 403 (453)
Q Consensus 361 ~~~~i~Iw~~~tg~~v~~l~~~~~------~v~~~~~~~~~~~lls~s~ 403 (453)
.+.+|+. .++.+..+..... .+..++++++++.+..++.
T Consensus 255 ---~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 255 ---RVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp ---EEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred ---EEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 8899987 4666666655432 4677888878777764443
No 198
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.01 E-value=5.6e-07 Score=89.57 Aligned_cols=271 Identities=8% Similarity=0.054 Sum_probs=155.4
Q ss_pred ecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCcc-cc-ccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEe
Q 046773 152 LSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRL-GQ-FSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTA 229 (453)
Q Consensus 152 fs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~-~~-~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~ 229 (453)
..+..|..++.++.|..+|.+||+.+..+........ .. .......+..++..|+.++.|+.|..+|..+ |....+.
T Consensus 51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~t-G~~~W~~ 129 (376)
T 3q7m_A 51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSD-GTVAWQT 129 (376)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTT-CCEEEEE
T ss_pred EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCC-CCEEEEE
Confidence 3567788888899999999999999877653211000 00 0012234566788888899999999999877 5211111
Q ss_pred eec-ceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceE
Q 046773 230 HFG-SVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESA 308 (453)
Q Consensus 230 ~~~-~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~ 308 (453)
... .+.. ..... ++. |+.++.|+.|..+|.++|+.+.-.....+. ..+..... ..+..+.++
T Consensus 130 ~~~~~~~~---~p~~~-~~~----v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~-----~~~~~~~~----~~~~~~~v~ 192 (376)
T 3q7m_A 130 KVAGEALS---RPVVS-DGL----VLIHTSNGQLQALNEADGAVKWTVNLDMPS-----LSLRGESA----PTTAFGAAV 192 (376)
T ss_dssp ECSSCCCS---CCEEE-TTE----EEEECTTSEEEEEETTTCCEEEEEECCC----------CCCCC----CEEETTEEE
T ss_pred eCCCceEc---CCEEE-CCE----EEEEcCCCeEEEEECCCCcEEEEEeCCCCc-----eeecCCCC----cEEECCEEE
Confidence 111 1111 01111 332 567888999999999999843110000000 00011111 223344455
Q ss_pred EEEcCCcEEEEECCCCceEEEEeeccCCeE--------E-EEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 309 VACTSSRVITFDLRNQGMVLGERGYGRGLY--------V-TSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 309 vas~d~tIrlWDl~t~~~~~~~~g~~~~~~--------v-~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
+++.++.|..+|+++|+.+........... + ......++.+..++.++ .+..+|..+|+.+...
T Consensus 193 ~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g-------~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 193 VGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG-------NLTALDLRSGQIMWKR 265 (376)
T ss_dssp ECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTS-------CEEEEETTTCCEEEEE
T ss_pred EEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCc-------EEEEEECCCCcEEeec
Confidence 556678899999999987655321110000 0 11123356777777778 8888999999877655
Q ss_pred EecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEEEEecCCCEEEEE-eCCcEEEEec
Q 046773 380 SLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 380 ~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~lasg-~D~~IklWDl 451 (453)
.... ....+ .+++.+..++. +.|..+|.++|+.+..........+.+....+..|..+ .++.|.++|.
T Consensus 266 ~~~~--~~~~~--~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 266 ELGS--VNDFI--VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp CCCC--EEEEE--EETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEET
T ss_pred cCCC--CCCce--EECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEEC
Confidence 4322 22222 24666666666 89999999999988776522121022222234455556 7788888875
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.01 E-value=1.9e-07 Score=89.65 Aligned_cols=231 Identities=6% Similarity=-0.031 Sum_probs=132.9
Q ss_pred EEEEEc--CCeEEE-------EeCCCCEEEEEeecCC-cceEEee-ecceecCceEEEEeCC-CceeeEEEEeeCCCeEE
Q 046773 196 SGIIIT--DSQLIF-------ATLDGDIHVAVIDDVA-NETRTAH-FGSVMDDGVLIDFTGC-SRYWVGLYAGLAGRAFH 263 (453)
Q Consensus 196 ~~i~f~--g~~Las-------gS~D~tIkvWd~~~~g-~~~~~~~-~~~v~~~~~~v~Fs~d-g~~~~~LaSgS~D~tIr 263 (453)
.+++++ +..+++ ++.++.|.+||..+ + ...+... ..........++|+++ |+.+ .++.+..|.
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~----v~~~~~~l~ 95 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-GKKTVICKPEVNGYGGIPAGCQCDRDANQLF----VADMRLGLL 95 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-CCEEEEECCEETTEECCEEEEEECSSSSEEE----EEETTTEEE
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC-CcEEEEEecccCCCCCCCceEEEecCCCcEE----EEECCCCEE
Confidence 456775 555555 47788999998766 4 2222210 0000111224889999 8742 334455899
Q ss_pred EeeCCCCcEEec-ccccCCcceeeeeeeeeeccceeEEEEcCCceE-EEEcC----------------CcEEEEECCCCc
Q 046773 264 IWDRQAEEVFVG-GDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESA-VACTS----------------SRVITFDLRNQG 325 (453)
Q Consensus 264 vWD~~tg~~~~g-~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~-vas~d----------------~tIrlWDl~t~~ 325 (453)
+||.+ ++...- ... .. ......++.+++++++.+ +++.. +.|..+|.. ++
T Consensus 96 ~~d~~-g~~~~~~~~~--~~--------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~ 163 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKD--SE--------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ 163 (314)
T ss_dssp EEETT-SCEEECCSBC--TT--------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC
T ss_pred EEeCC-CCEEEEEecc--CC--------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC
Confidence 99998 763210 000 00 001134678999987754 44332 346666765 44
Q ss_pred eEEEEeeccCCeEEEEEE----ecCCEEEEE-eCCCccccCcceEEEEEcC-CCee-----EEEEEecC-CCeeEEEEee
Q 046773 326 MVLGERGYGRGLYVTSVD----VNAEAYIVV-ENRELENQNRRLAIVRRVD-TFEE-----VCRFSLRA-DRNVNVMGCM 393 (453)
Q Consensus 326 ~~~~~~g~~~~~~v~~~~----~~g~~l~s~-s~dg~~~~~~~~i~Iw~~~-tg~~-----v~~l~~~~-~~v~~~~~~~ 393 (453)
...... +.....-.+++ ++++.+..+ +.++ .+.+|+.+ +++. ...+..+. .....+++++
T Consensus 164 ~~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~~~-------~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 164 MIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTK-------KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp EEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTT-------EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred EEEecc-CCCCcceEEEecccCCCCCEEEEEECCCC-------eEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 322211 11122234566 666555444 4456 78888876 4531 11121111 3356677777
Q ss_pred CCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEE-EEE-eCCcEEEEecC
Q 046773 394 NQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHV-AAS-CGTNIHLWDFG 452 (453)
Q Consensus 394 ~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~l-asg-~D~~IklWDl~ 452 (453)
++...++... +.|.+||.++|+.+..+..+... +. +|+||+++| ++. .++.|..+|+.
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEK-PSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSC-EEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCC-ceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 8776666655 89999999989888877766555 65 566899855 555 67899999865
No 200
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.00 E-value=2.8e-07 Score=100.70 Aligned_cols=286 Identities=7% Similarity=0.009 Sum_probs=162.5
Q ss_pred cCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccc--cc-eEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEe
Q 046773 153 SDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQF--SR-AVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTA 229 (453)
Q Consensus 153 s~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~--s~-~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~ 229 (453)
.+..|..++.|+.|.-+|++||+.+.++..+........ .. .-+++++++.+|+.++.|+.+..+|..+ |...-+.
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~T-G~~~W~~ 147 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKT-GQRAWSV 147 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCC-CCEeeee
Confidence 466777788899999999999999998864322100000 00 0123456788899999999999999887 6211111
Q ss_pred eec-ceecCceEEEEeC---CCceeeEEEEee------CCCeEEEeeCCCCcEEec-cccc-CCcce-------------
Q 046773 230 HFG-SVMDDGVLIDFTG---CSRYWVGLYAGL------AGRAFHIWDRQAEEVFVG-GDLT-DHNTV------------- 284 (453)
Q Consensus 230 ~~~-~v~~~~~~v~Fs~---dg~~~~~LaSgS------~D~tIrvWD~~tg~~~~g-~~l~-~~~~v------------- 284 (453)
... .. .....+..+| +++ ++.++ .|+.|..+|.+||+++-- ...+ ++...
T Consensus 148 ~~~~~~-~~~~~~~~sP~v~~g~----v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 148 DTRADH-KRSYTITGAPRVVNGK----VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp ECCSCT-TSCCBCCSCCEEETTE----EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred cCcCCC-CCCccccCCcEEECCE----EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 111 00 0000011111 333 23332 378999999999994311 0000 00000
Q ss_pred --eeeeeeeeeccceeEEEEcCCc--eEEEEcCC-------------------cEEEEECCCCceEEEEee--cc-----
Q 046773 285 --MGWRMLTEFTEFVGRVRVTSHE--SAVACTSS-------------------RVITFDLRNQGMVLGERG--YG----- 334 (453)
Q Consensus 285 --~~w~~l~~h~~~v~~v~~s~~~--~~vas~d~-------------------tIrlWDl~t~~~~~~~~g--~~----- 334 (453)
..|....+....-..+.++++. +++++.++ .|..+|++||+.+-.... |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 0000000111111246677633 34444443 499999999987755421 21
Q ss_pred --CCeEEEEEEecCC---EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC-CCe----------------------
Q 046773 335 --RGLYVTSVDVNAE---AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA-DRN---------------------- 386 (453)
Q Consensus 335 --~~~~v~~~~~~g~---~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~-~~v---------------------- 386 (453)
....+..+.++|. .++.++.+| .+.++|..||+.+....+.+ .+.
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G-------~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~ 375 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNG-------FFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKN 375 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTS-------EEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTS
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCC-------eEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCC
Confidence 1112223445564 567778888 99999999999875544332 010
Q ss_pred ----------------eEEEEeeCCCeEEEEe----------------------------------------------CC
Q 046773 387 ----------------VNVMGCMNQGYALMCV----------------------------------------------EG 404 (453)
Q Consensus 387 ----------------~~~~~~~~~~~lls~s----------------------------------------------~~ 404 (453)
..++++|+.+.+.+.+ ++
T Consensus 376 ~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g 455 (689)
T 1yiq_A 376 GKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSG 455 (689)
T ss_dssp SSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEE
T ss_pred CCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcce
Confidence 0134555555444321 16
Q ss_pred eEEEEECCCCeEEEEecccCCceEE-EEecCCCEEEEE-eCCcEEEEecC
Q 046773 405 VIRVWEVEGGEYMYSFRERIGEEVI-AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 405 tIrlWD~~tG~~l~tL~gh~~~~V~-a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+|+.||+.||+.+..++.+... .. .++..+..|..+ .|+.|+.||..
T Consensus 456 ~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 456 KLIAWDPVKQQAAWEVPYVTIF-NGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEEEEETTTTEEEEEEEESSSC-CCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred eEEEEECCCCCeEeEccCCCCc-cCccceECCCEEEEECCCCcEEEEECC
Confidence 7999999999999888655432 21 566677788888 99999999964
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.99 E-value=1.8e-06 Score=92.39 Aligned_cols=272 Identities=13% Similarity=0.079 Sum_probs=166.3
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECC--CCeEEEEecCCCCCccccccceEEEEEEc------CCeEEEE-eCCCCEE
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLT--TRLHVRTFRPQHSDRLGQFSRAVSGIIIT------DSQLIFA-TLDGDIH 215 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~--tg~~~~tl~gh~~~~~~~~s~~V~~i~f~------g~~Lasg-S~D~tIk 215 (453)
+.++.||+ ++|.+++.|++|.+||+. +++.+.++.... ....++|+ |+.++.+ -.+++|.
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---------EARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---------EEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---------CCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 45788875 688889999999999996 999888886322 12446665 6666655 4579999
Q ss_pred EEEeecCCcceEEe-eecce-------ecC--ceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCccee
Q 046773 216 VAVIDDVANETRTA-HFGSV-------MDD--GVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVM 285 (453)
Q Consensus 216 vWd~~~~g~~~~~~-~~~~v-------~~~--~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~ 285 (453)
|+|..+ . ..+.. ..+.. ..+ ...+.+++++..+ +++-..++.|.+.|..+.+.+.-
T Consensus 270 ViD~~t-~-~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~--vv~~~~~g~v~~vd~~~~~~~~v---------- 335 (567)
T 1qks_A 270 IMDGET-L-EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF--IVNVKETGKILLVDYTDLNNLKT---------- 335 (567)
T ss_dssp EEETTT-C-CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEE--EEEETTTTEEEEEETTCSSEEEE----------
T ss_pred EEECCC-C-cEEEEEeccccccccccccCCCceEEEEEcCCCCEE--EEEecCCCeEEEEecCCCcccee----------
Confidence 999766 3 22221 11110 001 1236678876642 44556778999999887652210
Q ss_pred eeeeeeeeccceeEEEEcCCc--eEEEEc-CCcEEEEECCCCceEEEE-e-e---ccCCeEEEEEEecCCEEEEEe--CC
Q 046773 286 GWRMLTEFTEFVGRVRVTSHE--SAVACT-SSRVITFDLRNQGMVLGE-R-G---YGRGLYVTSVDVNAEAYIVVE--NR 355 (453)
Q Consensus 286 ~w~~l~~h~~~v~~v~~s~~~--~~vas~-d~tIrlWDl~t~~~~~~~-~-g---~~~~~~v~~~~~~g~~l~s~s--~d 355 (453)
..+ ........+.|+|++ +++++. +++|.++|+++++.+... . + |.... ..-+++++..+...+ .+
T Consensus 336 --~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g-~~~~~p~~g~v~~t~~~g~ 411 (567)
T 1qks_A 336 --TEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG-ANFVHPTFGPVWATSHMGD 411 (567)
T ss_dssp --EEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTC-EEEEETTTEEEEEEEBSSS
T ss_pred --eee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccc-eeeECCCCCcEEEeCCCCC
Confidence 000 111234456788876 355553 578999999998755443 3 2 21111 122566655444333 34
Q ss_pred CccccCcceEEEEEcCC-------CeeEEEEEecCCCeeEEEEeeCCCeEEEEe--------CCeEEEEECCCC-----e
Q 046773 356 ELENQNRRLAIVRRVDT-------FEEVCRFSLRADRNVNVMGCMNQGYALMCV--------EGVIRVWEVEGG-----E 415 (453)
Q Consensus 356 g~~~~~~~~i~Iw~~~t-------g~~v~~l~~~~~~v~~~~~~~~~~~lls~s--------~~tIrlWD~~tG-----~ 415 (453)
+ +|.|++.++ -+.++++...+..-.-+..+|+++++.... +++|-|.|+.+. .
T Consensus 412 ~-------~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~ 484 (567)
T 1qks_A 412 D-------SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSD 484 (567)
T ss_dssp S-------EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSC
T ss_pred C-------eEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccC
Confidence 5 999999987 456777776543333455688888887655 149999999876 2
Q ss_pred -EEEEec-c------cCCceEE--EEecCCCEEEEE-e-----CCcEEEEecC
Q 046773 416 -YMYSFR-E------RIGEEVI--AFVGDDRHVAAS-C-----GTNIHLWDFG 452 (453)
Q Consensus 416 -~l~tL~-g------h~~~~V~--a~s~d~~~lasg-~-----D~~IklWDl~ 452 (453)
+...+. + ..+..++ .|.|||+.|-.+ . ++.|-|.|..
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 485 PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 223332 1 1122254 788999976433 2 6889998853
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.98 E-value=6.6e-08 Score=90.93 Aligned_cols=232 Identities=7% Similarity=-0.060 Sum_probs=132.5
Q ss_pred EEEEEecC--CEEE-EEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeec
Q 046773 147 CRCLTLSD--LYLA-CGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDD 221 (453)
Q Consensus 147 v~~lafs~--~~La-SGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~ 221 (453)
..++++++ ++.+ +.+.++.|.+||..++........+.. .+.+|+++ ++..++.. ++.|.+||.++
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY--------QPQGLAVDGAGTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC--------SCCCEEECTTCCEEEEET-TTEEEEECTTC
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC--------CcceeEECCCCCEEEEcC-CCEEEEEeCCC
Confidence 57888875 5666 557889999999877764322111111 23457776 45444444 88899998765
Q ss_pred CCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 222 VANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 222 ~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
.-...+.. .. ......++|+|+|+. +++.+.++.|.+||..+...... ..........++
T Consensus 97 ~~~~~~~~--~~-~~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~~~~~~~~--------------~~~~~~~p~~i~ 156 (270)
T 1rwi_B 97 NNQTVLPF--DG-LNYPEGLAVDTQGAV---YVADRGNNRVVKLAAGSKTQTVL--------------PFTGLNDPDGVA 156 (270)
T ss_dssp SCCEECCC--CS-CSSEEEEEECTTCCE---EEEEGGGTEEEEECTTCCSCEEC--------------CCCSCCSCCCEE
T ss_pred ceEeeeec--CC-cCCCcceEECCCCCE---EEEECCCCEEEEEECCCceeEee--------------ccccCCCceeEE
Confidence 11111110 10 011224899999985 44556678999998766542110 001113456788
Q ss_pred EcCCce-EEEEc-CCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 302 VTSHES-AVACT-SSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 302 ~s~~~~-~vas~-d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
+++++. .++.. ++.|.+||+.+.........+.....-.+++++|..+++...++ .+.+++.++..... +
T Consensus 157 ~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~-------~v~~~~~~~~~~~~-~ 228 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTN-------QVVKLLAGSTTSTV-L 228 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTS-------CEEEECTTCSCCEE-C
T ss_pred EeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCC-------cEEEEcCCCCccee-e
Confidence 887654 44443 47899999987654322211112223345566666666655566 78888876543322 2
Q ss_pred Ee-cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCe
Q 046773 380 SL-RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGE 415 (453)
Q Consensus 380 ~~-~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~ 415 (453)
.. .......+++++++...++... ++|+++++...+
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 11 1234677888888775555555 999999987654
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.96 E-value=5.1e-07 Score=86.60 Aligned_cols=236 Identities=14% Similarity=0.123 Sum_probs=139.1
Q ss_pred EEEEEecC--CEEEE-------EeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCC--eEEEEeCCCCEE
Q 046773 147 CRCLTLSD--LYLAC-------GFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDS--QLIFATLDGDIH 215 (453)
Q Consensus 147 v~~lafs~--~~LaS-------GS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~--~LasgS~D~tIk 215 (453)
..+++|++ .++++ ++.++.|.+||..+++......+ ... .....+.+++++.+ .|..++.+..|.
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~---~~~~~~~~i~~~~~~g~l~v~~~~~~l~ 95 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP-EVN---GYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC-EET---TEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEec-ccC---CCCCCCceEEEecCCCcEEEEECCCCEE
Confidence 36788864 56777 67889999999999986432221 000 00124667888644 555555555788
Q ss_pred EEEeecCCcceE-Eeee-cceecCceEEEEeCCCceeeEEEEeeCC---------------CeEEEeeCCCCcEEecccc
Q 046773 216 VAVIDDVANETR-TAHF-GSVMDDGVLIDFTGCSRYWVGLYAGLAG---------------RAFHIWDRQAEEVFVGGDL 278 (453)
Q Consensus 216 vWd~~~~g~~~~-~~~~-~~v~~~~~~v~Fs~dg~~~~~LaSgS~D---------------~tIrvWD~~tg~~~~g~~l 278 (453)
+||.+. ....+ .... +.-......++++++|+.| ++.+.+ +.|..+|.. ++...
T Consensus 96 ~~d~~g-~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~---v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~---- 166 (314)
T 1pjx_A 96 VVQTDG-TFEEIAKKDSEGRRMQGCNDCAFDYEGNLW---ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ---- 166 (314)
T ss_dssp EEETTS-CEEECCSBCTTSCBCBCCCEEEECTTSCEE---EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE----
T ss_pred EEeCCC-CEEEEEeccCCCccccCCcCEEECCCCCEE---EEecCcccccccccccccCCCCeEEEECCC-CCEEE----
Confidence 888662 11111 1100 0000112248999999863 344433 456666665 54210
Q ss_pred cCCcceeeeeeeeeeccceeEEEEc----CCc--eEEEEc-CCcEEEEECC-CCceE-----EEEeecc-CCeEEEEEEe
Q 046773 279 TDHNTVMGWRMLTEFTEFVGRVRVT----SHE--SAVACT-SSRVITFDLR-NQGMV-----LGERGYG-RGLYVTSVDV 344 (453)
Q Consensus 279 ~~~~~v~~w~~l~~h~~~v~~v~~s----~~~--~~vas~-d~tIrlWDl~-t~~~~-----~~~~g~~-~~~~v~~~~~ 344 (453)
+..+....+.++++ +++ +.++.. ++.|.+||++ ++... ....++. ....-.++++
T Consensus 167 -----------~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 167 -----------VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp -----------EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred -----------eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 11222345678888 876 345443 5789999987 44321 1111111 1122234566
Q ss_pred cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEEECCC
Q 046773 345 NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVWEVEG 413 (453)
Q Consensus 345 ~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~t 413 (453)
+|+.+++...++ .|.+|+.++++.+..+......+..++++++++++..++. +.|..+|+.+
T Consensus 236 ~G~l~v~~~~~~-------~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 236 DNNLLVANWGSS-------HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TCCEEEEEETTT-------EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCC-------EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 777777666677 8899998878777777665566788888888886665554 6999999875
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.90 E-value=8e-07 Score=90.91 Aligned_cols=186 Identities=12% Similarity=0.036 Sum_probs=110.2
Q ss_pred EEEeCCCceeeEEEEeeCCC--eEEEeeCCCCcEEecccccCCcceeeeeee-eeeccceeEEEEcC-CceEEEE-cCCc
Q 046773 241 IDFTGCSRYWVGLYAGLAGR--AFHIWDRQAEEVFVGGDLTDHNTVMGWRML-TEFTEFVGRVRVTS-HESAVAC-TSSR 315 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~--tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l-~~h~~~v~~v~~s~-~~~~vas-~d~t 315 (453)
++|+|+|+. |+++..++ .|.++|..++....- ...+ ......+..++++| ++.+..+ .+++
T Consensus 176 ia~~~~g~~---l~~~d~~~~~~I~~~d~~~~~~~~~-----------~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~ 241 (409)
T 3hrp_A 176 PAVTKDKQR---VYSIGWEGTHTVYVYMKASGWAPTR-----------IGQLGSTFSGKIGAVALDETEEWLYFVDSNKN 241 (409)
T ss_dssp CEECTTSSE---EEEEBSSTTCEEEEEEGGGTTCEEE-----------EEECCTTSCSCCCBCEECTTSSEEEEECTTCE
T ss_pred eeEecCCCc---EEEEecCCCceEEEEEcCCCceeEE-----------eeeccchhcCCcEEEEEeCCCCeEEEEECCCc
Confidence 567777774 55555544 677777765542100 0000 10124456788988 5544434 3468
Q ss_pred EEEEECCCCceEEE----EeeccCCe-E-EEEEEec-CCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC-----
Q 046773 316 VITFDLRNQGMVLG----ERGYGRGL-Y-VTSVDVN-AEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA----- 383 (453)
Q Consensus 316 IrlWDl~t~~~~~~----~~g~~~~~-~-v~~~~~~-g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~----- 383 (453)
|+.||+.++..... ..+..... . -.+|+++ +..+++-+..+ .|++++.+.. +..+..+.
T Consensus 242 I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~-------~I~~~~~~g~--~~~~~g~~~~~g~ 312 (409)
T 3hrp_A 242 FGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS-------SVYKITPDGE--CEWFCGSATQKTV 312 (409)
T ss_dssp EEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT-------EEEEECTTCC--EEEEEECTTCCSC
T ss_pred EEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC-------EEEEEecCCC--EEEEEeCCCCCCc
Confidence 99999998754332 11111111 1 3567775 44455544455 7777766533 44444432
Q ss_pred ----------CCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEeccc---------------CCceEE--EEecC
Q 046773 384 ----------DRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFRER---------------IGEEVI--AFVGD 434 (453)
Q Consensus 384 ----------~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh---------------~~~~V~--a~s~d 434 (453)
.....+++++++...++-+ . +.|+.||+.+|+ +.++.|+ ... .+ ++.+|
T Consensus 313 ~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~-P~giavd~~ 390 (409)
T 3hrp_A 313 QDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNY-PYDICYDGE 390 (409)
T ss_dssp BCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSS-EEEEEECSS
T ss_pred CCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCC-ceEEEEcCC
Confidence 2356788888887666666 6 899999988887 4556555 122 33 67788
Q ss_pred CCEEEEE-eCCcEEEEec
Q 046773 435 DRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 435 ~~~lasg-~D~~IklWDl 451 (453)
+..+++- ..+.|+..++
T Consensus 391 g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 391 GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp SEEEEEESTTCEEEEEEE
T ss_pred CCEEEEECCCCeEEEEEe
Confidence 8777777 7788887765
No 205
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.88 E-value=1.3e-06 Score=95.26 Aligned_cols=283 Identities=8% Similarity=0.046 Sum_probs=164.8
Q ss_pred cCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCcccc--cc-ceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEe
Q 046773 153 SDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQ--FS-RAVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTA 229 (453)
Q Consensus 153 s~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~--~s-~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~ 229 (453)
.+..|..++.++.|.-+|+.||+.+.++.........+ +. ...+++++++.+|+.++.|+.+..+|..+ |...-+.
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~t-G~~~W~~ 154 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAAT-GKEVWHQ 154 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCC-CCEEeee
Confidence 45667777889999999999999998886432110000 00 01134566788999999999999999887 6211111
Q ss_pred eec------ceecCceEEEEeCCCceeeEEEEeeC------CCeEEEeeCCCCcEEecccccCCc------------cee
Q 046773 230 HFG------SVMDDGVLIDFTGCSRYWVGLYAGLA------GRAFHIWDRQAEEVFVGGDLTDHN------------TVM 285 (453)
Q Consensus 230 ~~~------~v~~~~~~v~Fs~dg~~~~~LaSgS~------D~tIrvWD~~tg~~~~g~~l~~~~------------~v~ 285 (453)
... ......-.+ . +++ ++.++. |+.|..+|.+||+.+--.....+. ...
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~-~~~----v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~ 227 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--F-KGK----VIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAAR 227 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--E-TTE----EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred cCCcCcCcCcccccCcEE--E-CCE----EEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccc
Confidence 111 000000011 1 232 334432 789999999999943110000000 000
Q ss_pred eee----ee--eeeccceeEEEEcCCc--eEEEEcC-------------------CcEEEEECCCCceEEEEe-e-cc--
Q 046773 286 GWR----ML--TEFTEFVGRVRVTSHE--SAVACTS-------------------SRVITFDLRNQGMVLGER-G-YG-- 334 (453)
Q Consensus 286 ~w~----~l--~~h~~~v~~v~~s~~~--~~vas~d-------------------~tIrlWDl~t~~~~~~~~-g-~~-- 334 (453)
.|. .. .+.......+.++++. +++++.+ .+|..+|++||+.+-... . |.
T Consensus 228 ~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 228 TWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp TSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred cccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 010 00 0111111345666543 3444333 259999999998765532 1 21
Q ss_pred -----CCeEEEEEEecC---CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC-Ce-------------------
Q 046773 335 -----RGLYVTSVDVNA---EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD-RN------------------- 386 (453)
Q Consensus 335 -----~~~~v~~~~~~g---~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~-~v------------------- 386 (453)
..-.+..+..+| ..++.++.+| .+.++|..||+.+..+.+.+. +.
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G-------~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~ 380 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNG-------FFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGS 380 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTS-------EEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTT
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCC-------EEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCC
Confidence 112233344567 5677788888 999999999998877654321 00
Q ss_pred ---------------eEEEEeeCCCeEEEEe-------------------------------------------C-CeEE
Q 046773 387 ---------------VNVMGCMNQGYALMCV-------------------------------------------E-GVIR 407 (453)
Q Consensus 387 ---------------~~~~~~~~~~~lls~s-------------------------------------------~-~tIr 407 (453)
..++++++.+.+.+.+ . ++|.
T Consensus 381 ~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~ 460 (677)
T 1kb0_A 381 KPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLL 460 (677)
T ss_dssp SCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEE
T ss_pred CccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEE
Confidence 1345666666655421 1 6899
Q ss_pred EEECCCCeEEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEecC
Q 046773 408 VWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 408 lWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.||+.||+.+-.++.. .. ++ .++.++..|..+ .|+.+++||..
T Consensus 461 A~D~~tG~~~W~~~~~-~~-~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 461 AWDPVAQKAAWSVEHV-SP-WNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEETTTTEEEEEEEES-SS-CCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EEeCCCCcEEeecCCC-CC-CcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 9999999998877532 22 23 567778888878 99999999974
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.87 E-value=1.8e-07 Score=102.02 Aligned_cols=192 Identities=9% Similarity=0.064 Sum_probs=118.4
Q ss_pred EEEeCCCceeeEEE--EeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEc-CCceEEEEcCC---
Q 046773 241 IDFTGCSRYWVGLY--AGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT-SHESAVACTSS--- 314 (453)
Q Consensus 241 v~Fs~dg~~~~~La--SgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s-~~~~~vas~d~--- 314 (453)
++|||||++++... +|+.+.+|+|||++||+.+.. ++.+.. ...+.++ ++.++.++.+.
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-------------~~~~~k--~~~~~WsDg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-------------PLKDVK--FSGISWLGNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-------------EEEEEE--SCCCEEETTTEEEEEESSCCC-
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-------------ccCCce--eccEEEeCCCEEEEEEecCccc
Confidence 68999999743222 345557899999999985421 111110 1234454 44456666553
Q ss_pred ----------cEEEEECCCCce----EEEEee-ccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe-eEEE
Q 046773 315 ----------RVITFDLRNQGM----VLGERG-YGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE-EVCR 378 (453)
Q Consensus 315 ----------tIrlWDl~t~~~----~~~~~g-~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~-~v~~ 378 (453)
.|++|++.+++. +..... +.....-..++++|+.++..+..+. ..+.+.++++++++ +...
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST---SGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS---SCCEEEEEETTSTTCCCEE
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC---CCcEEEEEECCCCCCceEE
Confidence 399999998752 222222 2222333567888988765544331 12377888887763 4556
Q ss_pred EEecCCCeeEEEEeeCCCeEEEEeC-----CeEEEEECCCCeE--EEEecccCCceEEEEecCCCEEEEE--eCC--cEE
Q 046773 379 FSLRADRNVNVMGCMNQGYALMCVE-----GVIRVWEVEGGEY--MYSFRERIGEEVIAFVGDDRHVAAS--CGT--NIH 447 (453)
Q Consensus 379 l~~~~~~v~~~~~~~~~~~lls~s~-----~tIrlWD~~tG~~--l~tL~gh~~~~V~a~s~d~~~lasg--~D~--~Ik 447 (453)
+..+.+..... ++++++.++..+. ..|.+||+.++++ ..+|..|....+ .+++++++|+.. .|+ .|+
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEE
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEE
Confidence 66655554444 5667777765442 5899999998765 456666665535 999999988765 555 688
Q ss_pred EEecC
Q 046773 448 LWDFG 452 (453)
Q Consensus 448 lWDl~ 452 (453)
+||+.
T Consensus 354 ~~d~~ 358 (693)
T 3iuj_A 354 QFDYE 358 (693)
T ss_dssp EECTT
T ss_pred EEECC
Confidence 88763
No 207
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.87 E-value=1.5e-06 Score=94.85 Aligned_cols=278 Identities=11% Similarity=0.026 Sum_probs=155.6
Q ss_pred EEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCC-CCC-ccccccceEEEEEEcCCeEEEEeC------CCCEEEEEee
Q 046773 149 CLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQ-HSD-RLGQFSRAVSGIIITDSQLIFATL------DGDIHVAVID 220 (453)
Q Consensus 149 ~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh-~~~-~~~~~s~~V~~i~f~g~~LasgS~------D~tIkvWd~~ 220 (453)
.+++.+..|..++.|+.|..+|++||+.+.++..+ ... .....+ +..+.+.+++.++. |+.|+.+|..
T Consensus 123 ~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~----~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 123 GVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITG----APRVFKGKVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp CCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCS----CCEEETTEEEECCBCTTTCCBCEEEEEETT
T ss_pred CceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccccc----CcEEECCEEEEEecccccCCCCEEEEEECC
Confidence 34556778899999999999999999999888753 100 001101 11233555665553 6889998887
Q ss_pred cCCcceEEeeeccee---------------------------cCc---eEEEEeCCCceeeEEEEeeCCC----------
Q 046773 221 DVANETRTAHFGSVM---------------------------DDG---VLIDFTGCSRYWVGLYAGLAGR---------- 260 (453)
Q Consensus 221 ~~g~~~~~~~~~~v~---------------------------~~~---~~v~Fs~dg~~~~~LaSgS~D~---------- 260 (453)
+ |...-+.....-. ... ..++|+|++.. |+.++.+.
T Consensus 199 t-G~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~---vy~~~~~~~~w~~~~~~~ 274 (677)
T 1kb0_A 199 T-GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNT---MYVGTGNGSPWSHKVRSP 274 (677)
T ss_dssp T-CCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTE---EEEECCCEESSCHHHHST
T ss_pred C-CcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCE---EEEECCCCccccCCCCCc
Confidence 7 5222111110000 000 13688888775 55555443
Q ss_pred ---------eEEEeeCCCCcEEecccccCCcceeeeeeeeeecccee-EEEEcC---CceEEEEcCCcEEEEECCCCceE
Q 046773 261 ---------AFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVG-RVRVTS---HESAVACTSSRVITFDLRNQGMV 327 (453)
Q Consensus 261 ---------tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~-~v~~s~---~~~~vas~d~tIrlWDl~t~~~~ 327 (453)
+|..+|.+||+..--..+..+. .|. ......++. ....++ +.+++++.++.+.++|.+||+.+
T Consensus 275 ~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d---~wd-~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 275 KGGDNLYLASIVALDPDTGKYKWHYQETPGD---NWD-YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp TCCCCTTTTEEEEECTTTCCEEEEEESSTTC---CSC-CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cCCCCeeeEEEEEEECCCCCEEEEEecCCCc---ccc-cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 5999999999943100000000 000 000011211 111222 12344455689999999999876
Q ss_pred EEEe-eccC--------CeE--------------------------EEEEEecCCEEEEEeCC-------------C---
Q 046773 328 LGER-GYGR--------GLY--------------------------VTSVDVNAEAYIVVENR-------------E--- 356 (453)
Q Consensus 328 ~~~~-g~~~--------~~~--------------------------v~~~~~~g~~l~s~s~d-------------g--- 356 (453)
.+.. .... ... -.+++++...+++.+.+ +
T Consensus 351 ~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 351 SAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCC
T ss_pred ccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccc
Confidence 5432 1100 000 13567766776665432 0
Q ss_pred --------cc------------ccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCe
Q 046773 357 --------LE------------NQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGE 415 (453)
Q Consensus 357 --------~~------------~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~ 415 (453)
.. ......+..||..|++.+-.+..... .....+..+++.++.++. +++++||++||+
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP-WNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC-CcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 00 00124789999999998877764321 223344556777776665 999999999999
Q ss_pred EEEEecccCCce--EEEEecCCCEEE
Q 046773 416 YMYSFRERIGEE--VIAFVGDDRHVA 439 (453)
Q Consensus 416 ~l~tL~gh~~~~--V~a~s~d~~~la 439 (453)
.+.++.-..+.. -..+.+||+..+
T Consensus 510 ~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 510 KLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred eeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 999986443220 124458887544
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.86 E-value=2.2e-05 Score=74.12 Aligned_cols=264 Identities=9% Similarity=-0.030 Sum_probs=148.9
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~~ 222 (453)
+.++++++ ++.++...++.|.+||.. ++... +.-... ...+.+++++ +...++...++.|.++|.+.
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~------~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g- 92 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTP------DAKVMCLIVSSLGDIWFTENGANKIGKLSKKG- 92 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSST------TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCC------CCcceeEEECCCCCEEEEecCCCeEEEECCCC-
Confidence 67888874 577777788999999998 66443 221110 0146678876 44455544567788887652
Q ss_pred CcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEE
Q 046773 223 ANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRV 302 (453)
Q Consensus 223 g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~ 302 (453)
....+...... .....++++++|+.+ ++...++.|..+|.+ ++...- .+......+..+.+
T Consensus 93 ~~~~~~~~~~~--~~~~~i~~~~~g~l~---v~~~~~~~i~~~~~~-g~~~~~-------------~~~~~~~~~~~i~~ 153 (300)
T 2qc5_A 93 GFTEYPLPQPD--SGPYGITEGLNGDIW---FTQLNGDRIGKLTAD-GTIYEY-------------DLPNKGSYPAFITL 153 (300)
T ss_dssp CEEEEECSSTT--CCEEEEEECSTTCEE---EEETTTTEEEEECTT-SCEEEE-------------ECSSTTCCEEEEEE
T ss_pred CeEEecCCCCC--CCCccceECCCCCEE---EEccCCCeEEEECCC-CCEEEc-------------cCCCCCCCceeEEE
Confidence 12212111000 112248899999853 345557889999987 663210 01111235677888
Q ss_pred cCCc-eEEEEc-CCcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 303 TSHE-SAVACT-SSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 303 s~~~-~~vas~-d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
++++ +.++.. ++.|..+|. +++..... ..+.....-.+++++++.+++....+ .+.+++. +++.. .+
T Consensus 154 d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-------~i~~~~~-~g~~~-~~ 223 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGN-------KIGRITT-TGEIS-EY 223 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT-------EEEEECT-TCCEE-EE
T ss_pred CCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCC-------EEEEEcC-CCcEE-EE
Confidence 8766 445544 468999998 55433211 11222222334556666665544455 6777776 44432 22
Q ss_pred Ee--cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEE-EEecccCCceEE--EEecCCCEEEEEeCCcEEEEec
Q 046773 380 SL--RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYM-YSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDF 451 (453)
Q Consensus 380 ~~--~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l-~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl 451 (453)
.. .......+++.+++...++... +.|..+|. +|+.. ..+...... +. ++.++|+..++... .|...|.
T Consensus 224 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAE-PHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCC-CCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCc-cceeEeCCCCCEEEEccC-ceEEeCC
Confidence 22 2234667777777765555544 89999998 56543 233322333 44 55688887665553 5555553
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.86 E-value=6.7e-07 Score=97.38 Aligned_cols=230 Identities=12% Similarity=0.082 Sum_probs=137.4
Q ss_pred eEEEEEE--cCCeEEEEe-----CCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCe-----
Q 046773 194 AVSGIII--TDSQLIFAT-----LDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRA----- 261 (453)
Q Consensus 194 ~V~~i~f--~g~~LasgS-----~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~t----- 261 (453)
.+.+++| ||++||.+. .+.+|+|+|+++ | ..+..+...+.. ..++|+ ||+. |+..+.|.+
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t-g-~~~~~~~~~~k~--~~~~Ws-Dg~~---l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES-K-QPLETPLKDVKF--SGISWL-GNEG---FFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT-C-SEEEEEEEEEES--CCCEEE-TTTE---EEEEESSCCC----
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC-C-CCCccccCCcee--ccEEEe-CCCE---EEEEEecCcccccc
Confidence 3455555 577888543 235799999988 5 223322222200 136899 9986 566676644
Q ss_pred --------EEEeeCCCCc---EEecccccCCcceeeeeeeee-eccceeEEEEcCCce--EEEEc-C---CcEEEEECCC
Q 046773 262 --------FHIWDRQAEE---VFVGGDLTDHNTVMGWRMLTE-FTEFVGRVRVTSHES--AVACT-S---SRVITFDLRN 323 (453)
Q Consensus 262 --------IrvWD~~tg~---~~~g~~l~~~~~v~~w~~l~~-h~~~v~~v~~s~~~~--~vas~-d---~tIrlWDl~t 323 (453)
|++|++.+++ .+. ..... |..+...+.++|++. ++.+. + ..|.++|+.+
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v-------------~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLV-------------FGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEE-------------ESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred cccCCCcEEEEEECCCCcccceEE-------------EecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 9999998865 111 01112 333456788898874 33332 2 4799999987
Q ss_pred Cc-eEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCee--EEEEEecCCCeeEEEEeeCCCeEEE
Q 046773 324 QG-MVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEE--VCRFSLRADRNVNVMGCMNQGYALM 400 (453)
Q Consensus 324 ~~-~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~--v~~l~~~~~~v~~~~~~~~~~~lls 400 (453)
+. ...++..+..... ..++++++.++..+..+. ....+.+++++++++ ...+..+...+. .+++++++++.
T Consensus 269 ~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 269 ENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp TTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEE
T ss_pred CCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEE
Confidence 63 3333333332222 237788888766655431 122677778887654 355666655554 77888888876
Q ss_pred EeC----CeEEEEECCCCeEEEEecc-cCCceEEE--EecCCCEEEEE-eC----CcEEEEecC
Q 046773 401 CVE----GVIRVWEVEGGEYMYSFRE-RIGEEVIA--FVGDDRHVAAS-CG----TNIHLWDFG 452 (453)
Q Consensus 401 ~s~----~tIrlWD~~tG~~l~tL~g-h~~~~V~a--~s~d~~~lasg-~D----~~IklWDl~ 452 (453)
... ..|++||+.++. ++.+.- ..+. +.. +++|++.|+.. .+ ++|.+||+.
T Consensus 343 ~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~-~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKR-VREVALPGLGS-VSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EEEETTEEEEEEECTTSCE-EEEECCSSSSE-EEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCeeEEEEEECCCCe-eEEeecCCCce-EEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 653 489999998554 455532 3344 553 45788766544 43 788888863
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.85 E-value=1.6e-06 Score=94.64 Aligned_cols=276 Identities=9% Similarity=0.045 Sum_probs=153.4
Q ss_pred EEecCCEEEEEeCCCcEEEEECCCCeEEEEecCC-C-CCccccccceEEEEEEcCCeEEEEe------CCCCEEEEEeec
Q 046773 150 LTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQ-H-SDRLGQFSRAVSGIIITDSQLIFAT------LDGDIHVAVIDD 221 (453)
Q Consensus 150 lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh-~-~~~~~~~s~~V~~i~f~g~~LasgS------~D~tIkvWd~~~ 221 (453)
+++.+.+|+.++.|++|..+|++||+.+..+... . ...+...+. .+.. +.+++.++ .|+.|..+|..+
T Consensus 117 ~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~s---P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~t 192 (689)
T 1yiq_A 117 VAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGA---PRVV-NGKVVIGNGGAEFGVRGYVTAYDAET 192 (689)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSC---CEEE-TTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred cEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCC---cEEE-CCEEEEEeCCCccCCCCEEEEEECCC
Confidence 4456778899999999999999999998877642 1 100111001 1223 34444443 367888888887
Q ss_pred CCcceEEeeec--c---------e------e---------cCc---eEEEEeCCCceeeEEEEeeCCC------------
Q 046773 222 VANETRTAHFG--S---------V------M---------DDG---VLIDFTGCSRYWVGLYAGLAGR------------ 260 (453)
Q Consensus 222 ~g~~~~~~~~~--~---------v------~---------~~~---~~v~Fs~dg~~~~~LaSgS~D~------------ 260 (453)
|...-+.... . + . ..+ ..++|+|++.. |+.++.++
T Consensus 193 -G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~---vy~~~~~g~~w~~~~~~~~~ 268 (689)
T 1yiq_A 193 -GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNL---LYIGVGNGSLWDPKWRSQAK 268 (689)
T ss_dssp -CCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTE---EEEECCCEESSCHHHHHTTC
T ss_pred -CcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCE---EEEeCCCCCccccCCCCCCC
Confidence 6221111110 0 0 0 000 13688888764 66676665
Q ss_pred -------eEEEeeCCCCcEEecccccCCcceeeeeeeeeeccce--eEEEEcCC---ceEEEEcCCcEEEEECCCCceEE
Q 046773 261 -------AFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFV--GRVRVTSH---ESAVACTSSRVITFDLRNQGMVL 328 (453)
Q Consensus 261 -------tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v--~~v~~s~~---~~~vas~d~tIrlWDl~t~~~~~ 328 (453)
+|..+|.+||+..--.....+. .|.. ..+.+. ..+.+.+. -+++++.++.+.++|.+||+.+-
T Consensus 269 gd~~y~~~v~AlD~~TG~~~W~~~~~~~d---~wd~--~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 269 GDNLFLSSIVAVNADTGEYVWHYQTTPGD---AWDY--TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp SCCTTTTEEEEEETTTCCEEEEEESSTTC---CSCC--CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCceeeeeEEEEEccCCceeEeeecCCcc---cccc--cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEec
Confidence 4999999999943100000000 0000 001111 11223332 13344556899999999998763
Q ss_pred EEee-ccCC---------eE-----------------------------EEEEEecCCEEEEEeCCC-------------
Q 046773 329 GERG-YGRG---------LY-----------------------------VTSVDVNAEAYIVVENRE------------- 356 (453)
Q Consensus 329 ~~~g-~~~~---------~~-----------------------------v~~~~~~g~~l~s~s~dg------------- 356 (453)
.... .... .. -.+++++...+++.+.+.
T Consensus 344 ~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~ 423 (689)
T 1yiq_A 344 AKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKR 423 (689)
T ss_dssp EEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCC
T ss_pred cccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccc
Confidence 3210 0000 00 035666666666553320
Q ss_pred -----cccc--------------------CcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEE
Q 046773 357 -----LENQ--------------------NRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWE 410 (453)
Q Consensus 357 -----~~~~--------------------~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD 410 (453)
..+. -+.+++.||..||+.+-.+..+... ........++.+..++. +.|+.||
T Consensus 424 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 424 NPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF-NGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp CSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC-CCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc-cCccceECCCEEEEECCCCcEEEEE
Confidence 0000 0247999999999988887665422 22244456777777665 9999999
Q ss_pred CCCCeEEEEecccCCce--EEEEecCCCEEE
Q 046773 411 VEGGEYMYSFRERIGEE--VIAFVGDDRHVA 439 (453)
Q Consensus 411 ~~tG~~l~tL~gh~~~~--V~a~s~d~~~la 439 (453)
.+||+.|..++...+.. -..+..||+..+
T Consensus 503 ~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 503 ADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp TTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 99999998886553330 124568888543
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.83 E-value=2.8e-06 Score=86.57 Aligned_cols=253 Identities=9% Similarity=-0.035 Sum_probs=150.0
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEe----------CCCCEEEEEeecCC--cceEEee
Q 046773 163 DGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFAT----------LDGDIHVAVIDDVA--NETRTAH 230 (453)
Q Consensus 163 D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS----------~D~tIkvWd~~~~g--~~~~~~~ 230 (453)
+++|-+.|..|++.+.++..... | . -.+++||+.|+.++ .+++|.+||..+ + +..+...
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~----P---~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t-~~v~~~I~v~ 128 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFL----P---N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT-LLPTADIELP 128 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSS----C---E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-CCEEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCCC----C---c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC-CeEEEEEECC
Confidence 67999999999999988863221 2 1 12455677776654 367899999887 3 1222111
Q ss_pred ec-c--eecCceEEEEeCCCceeeEEEEee--CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEE-EcC
Q 046773 231 FG-S--VMDDGVLIDFTGCSRYWVGLYAGL--AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVR-VTS 304 (453)
Q Consensus 231 ~~-~--v~~~~~~v~Fs~dg~~~~~LaSgS--~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~-~s~ 304 (453)
.+ . +......++|+|||++ |+.+. .+++|.|+|+++++...- + .+.+. ..+. ...
T Consensus 129 ~g~r~~~g~~P~~~a~spDGk~---lyVan~~~~~~VsVID~~t~~vv~t--------I----~v~g~----~~~~P~g~ 189 (386)
T 3sjl_D 129 DAPRFLVGTYPWMTSLTPDGKT---LLFYQFSPAPAVGVVDLEGKAFKRM--------L----DVPDC----YHIFPTAP 189 (386)
T ss_dssp TCCCCCBSCCGGGEEECTTSSE---EEEEECSSSCEEEEEETTTTEEEEE--------E----ECCSE----EEEEEEET
T ss_pred CccccccCCCCceEEEcCCCCE---EEEEEcCCCCeEEEEECCCCcEEEE--------E----ECCCc----ceeecCCC
Confidence 00 0 0011123899999997 44444 378999999999984310 0 00110 0011 112
Q ss_pred CceEEEEcCCcEEEEECCC-CceEEEEe-e-ccCCeEE---EEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe--eE
Q 046773 305 HESAVACTSSRVITFDLRN-QGMVLGER-G-YGRGLYV---TSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE--EV 376 (453)
Q Consensus 305 ~~~~vas~d~tIrlWDl~t-~~~~~~~~-g-~~~~~~v---~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~--~v 376 (453)
+.++..|.|+++-+.|+.+ ++...+.. . ......+ ..|+....+++-.+.++ ++.+-|..++. .+
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g-------~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTG-------KIHQIDLSSGDAKFL 262 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTS-------EEEEEECTTSSCEEC
T ss_pred ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCC-------EEEEEECCCCcceee
Confidence 3345668888888889876 44322111 0 0000111 13432233455577778 88888876543 22
Q ss_pred EEEE----------ecCCCeeEEEEeeCCCeEEEEe-----------CCeEEEEECCCCeEEEEecccCCceEE--EEec
Q 046773 377 CRFS----------LRADRNVNVMGCMNQGYALMCV-----------EGVIRVWEVEGGEYMYSFRERIGEEVI--AFVG 433 (453)
Q Consensus 377 ~~l~----------~~~~~v~~~~~~~~~~~lls~s-----------~~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~ 433 (453)
..+. ..+...+.+..+++++++.... +++|-+-|++|++.+.++.--. .++ +|++
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~ 340 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQ 340 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECS
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECC
Confidence 2222 1244456677788887776542 1689999999999999885321 244 7889
Q ss_pred CCC-EEEEE--eCCcEEEEecC
Q 046773 434 DDR-HVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 434 d~~-~lasg--~D~~IklWDl~ 452 (453)
|++ +|.++ .+++|.++|..
T Consensus 341 D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 341 DEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEEcCCCCeEEEEECC
Confidence 997 66554 68999999964
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.82 E-value=2.9e-06 Score=82.04 Aligned_cols=207 Identities=9% Similarity=-0.012 Sum_probs=119.9
Q ss_pred eEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcc
Q 046773 204 QLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 204 ~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
.+++...+++|..||.++ +..........+ ..++|+|+|+++ .+. +..|.+||.++++...-......
T Consensus 27 l~~~d~~~~~i~~~d~~~-~~~~~~~~~~~~----~~i~~~~dG~l~----v~~-~~~l~~~d~~~g~~~~~~~~~~~-- 94 (297)
T 3g4e_A 27 LLFVDIPAKKVCRWDSFT-KQVQRVTMDAPV----SSVALRQSGGYV----ATI-GTKFCALNWKEQSAVVLATVDND-- 94 (297)
T ss_dssp EEEEETTTTEEEEEETTT-CCEEEEECSSCE----EEEEEBTTSSEE----EEE-TTEEEEEETTTTEEEEEEECCTT--
T ss_pred EEEEECCCCEEEEEECCC-CcEEEEeCCCce----EEEEECCCCCEE----EEE-CCeEEEEECCCCcEEEEEecCCC--
Confidence 445556678888888776 311111111111 248999999953 223 67899999998872110000000
Q ss_pred eeeeeeeeeeccceeEEEEcCCceEEEEc-----------CCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEE-E
Q 046773 284 VMGWRMLTEFTEFVGRVRVTSHESAVACT-----------SSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYI-V 351 (453)
Q Consensus 284 v~~w~~l~~h~~~v~~v~~s~~~~~vas~-----------d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~-s 351 (453)
.....++.+++++++.+..++ ....+||-+...+.+...........-.+++++++.+. +
T Consensus 95 --------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 95 --------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp --------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEE
T ss_pred --------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEe
Confidence 001346788999877544432 13456776654333322211111122356777887654 4
Q ss_pred EeCCCccccCcceEEEEEc--CCCeeE--EEE-Ee--cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEeccc
Q 046773 352 VENRELENQNRRLAIVRRV--DTFEEV--CRF-SL--RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRER 423 (453)
Q Consensus 352 ~s~dg~~~~~~~~i~Iw~~--~tg~~v--~~l-~~--~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh 423 (453)
.+.++ .|.+++. .+|+.. ..+ .+ .+.....+++.+++...++... +.|.+||.++|+.+.++..+
T Consensus 167 ~~~~~-------~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 167 DSLSY-------SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EGGGT-------EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred cCCCC-------cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 44455 7888876 455421 112 11 1233567777788876666665 88999999999999999877
Q ss_pred CCceEE--EEe-cCCCEE
Q 046773 424 IGEEVI--AFV-GDDRHV 438 (453)
Q Consensus 424 ~~~~V~--a~s-~d~~~l 438 (453)
... +. +|. ||+++|
T Consensus 240 ~~~-~t~~~f~g~d~~~L 256 (297)
T 3g4e_A 240 VDK-TTSCCFGGKNYSEM 256 (297)
T ss_dssp SSB-EEEEEEESGGGCEE
T ss_pred CCC-ceEEEEeCCCCCEE
Confidence 655 55 676 787765
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.79 E-value=1e-08 Score=103.41 Aligned_cols=189 Identities=10% Similarity=0.057 Sum_probs=103.9
Q ss_pred EEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcc--eE
Q 046773 150 LTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANE--TR 227 (453)
Q Consensus 150 lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~--~~ 227 (453)
.+.++.+|++++.|++|..||+.||+++.++.. ... .+. .+..++..+++++.|++|+.||..+ |.. ..
T Consensus 5 P~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~---~s~---p~~~~g~~~v~~s~dg~l~a~d~~t-G~~~w~~ 75 (369)
T 2hz6_A 5 VTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPV---LQV---PTHVEEPAFLPDPNDGSLYTLGSKN-NEGLTKL 75 (369)
T ss_dssp ---CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCS---CCC---C-----CCEEECTTTCCEEEC------CCSEEC
T ss_pred CeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCc---eec---ceEcCCCEEEEeCCCCEEEEEECCC-Cceeeee
Confidence 344678999999999999999999999988875 211 111 1223566777788999999999976 511 12
Q ss_pred EeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEc--CC
Q 046773 228 TAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT--SH 305 (453)
Q Consensus 228 ~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s--~~ 305 (453)
..+....... ...+..++. |++|+.|++|..||.+||+.+ |. +..+. .+.++ .+
T Consensus 76 ~~~~~~~~~~--sp~~~~~~~----v~~g~~dg~v~a~D~~tG~~~-------------w~-~~~~~----~~~~~p~~~ 131 (369)
T 2hz6_A 76 PFTIPELVQA--SPCRSSDGI----LYMGKKQDIWYVIDLLTGEKQ-------------QT-LSSAF----ADSLSPSTS 131 (369)
T ss_dssp SCCHHHHHTT--CSCC---------CCCCEEEEEEEEECCC---------------------------------------
T ss_pred eccCcccccc--CceEecCCE----EEEEeCCCEEEEEECCCCcEE-------------EE-ecCCC----cccccccCC
Confidence 1221111100 001112332 567889999999999999843 11 11110 11222 33
Q ss_pred ceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecC-----CEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE
Q 046773 306 ESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNA-----EAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS 380 (453)
Q Consensus 306 ~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g-----~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~ 380 (453)
.+++++.+++|+.||+++|+.+....... .....+++ +.++.++.++ .+..||..+|+.+-.+.
T Consensus 132 ~v~~~~~dg~v~a~d~~tG~~~W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg-------~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 132 LLYLGRTEYTITMYDTKTRELRWNATYFD----YAASLPEDDVDYKMSHFVSNGDG-------LVVTVDSESGDVLWIQN 200 (369)
T ss_dssp -EEEEEEEEEEECCCSSSSSCCCEEEEEE----ECCBCCCCCTTCCCCEEEEETSC-------EEEEECTTTCCEEEEEE
T ss_pred EEEEEecCCEEEEEECCCCCEEEeEeccc----ccCccccCCccccceEEEECCCC-------EEEEEECCCCcEEEEec
Confidence 45666778899999999997654432111 11222223 5677788888 99999999999887766
Q ss_pred ec
Q 046773 381 LR 382 (453)
Q Consensus 381 ~~ 382 (453)
..
T Consensus 201 ~~ 202 (369)
T 2hz6_A 201 YA 202 (369)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.74 E-value=1.3e-05 Score=75.61 Aligned_cols=226 Identities=8% Similarity=-0.029 Sum_probs=131.2
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE 271 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~ 271 (453)
.+.+|+++ |...++...++.|.+||.+. ....+...... .....++++++|+.| ++...++.|..||.+ ++
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~--~~~~~i~~~~~g~l~---v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLDG-KITEYPLPTPD--AKVMCLTISSDGEVW---FTENAANKIGRITKK-GI 88 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEECSSTT--CCEEEEEECTTSCEE---EEETTTTEEEEECTT-SC
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCCC-CeEEecCCccc--CceeeEEECCCCCEE---EeCCCCCeEEEECCC-Cc
Confidence 46678776 44455444478898888662 22222111000 112248899999863 344557889999986 44
Q ss_pred EEecccccCCcceeeeeeeeeeccceeEEEEcCCce-EEEEc-CCcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCE
Q 046773 272 VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-AVACT-SSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEA 348 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-~vas~-d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~ 348 (453)
... ..+......+..+.+++++. .++.. ++.|.+||+ +++..... ........-.+++++++.
T Consensus 89 ~~~-------------~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l 154 (299)
T 2z2n_A 89 IKE-------------YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL 154 (299)
T ss_dssp EEE-------------EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred EEE-------------EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE
Confidence 210 00111223567888987664 44443 468999999 55433221 112222333445566666
Q ss_pred EEEEeCCCccccCcceEEEEEcCCCeeEEEEEe--cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEE-EecccC
Q 046773 349 YIVVENRELENQNRRLAIVRRVDTFEEVCRFSL--RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMY-SFRERI 424 (453)
Q Consensus 349 l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~--~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~-tL~gh~ 424 (453)
+++...++ .+.+++. +++.. .+.. .......+++.+++...++... +.|.+||. +++... .+..+.
T Consensus 155 ~v~~~~~~-------~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 224 (299)
T 2z2n_A 155 WFTENQNN-------AIGRITE-SGDIT-EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPN 224 (299)
T ss_dssp EEEETTTT-------EEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred EEEeCCCC-------EEEEEcC-CCcEE-EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCC
Confidence 66555556 7777777 55433 2222 2233567777777765555444 89999999 776543 233344
Q ss_pred CceEE--EEecCCCEEEEE-eCCcEEEEec
Q 046773 425 GEEVI--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 425 ~~~V~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
.. +. ++.++|+..++. .++.|.+||.
T Consensus 225 ~~-~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 225 AR-PHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CC-EEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CC-ceeEEECCCCCEEEeccCCceEEEECC
Confidence 44 55 556888877777 7788988885
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.71 E-value=6.9e-09 Score=104.66 Aligned_cols=189 Identities=10% Similarity=0.020 Sum_probs=95.8
Q ss_pred EEEcCCeEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEeccc
Q 046773 198 IIITDSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGD 277 (453)
Q Consensus 198 i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~ 277 (453)
.+.++.+|++++.|++|+.||..+ |....+...+.+. ...+.++++. +++++.|++|..||.++|+.+.-
T Consensus 5 P~v~~~~v~~gs~dg~v~a~d~~t-G~~~W~~~~~~~~----s~p~~~~g~~---~v~~s~dg~l~a~d~~tG~~~w~-- 74 (369)
T 2hz6_A 5 VTLPETLLFVSTLDGSLHAVSKRT-GSIKWTLKEDPVL----QVPTHVEEPA---FLPDPNDGSLYTLGSKNNEGLTK-- 74 (369)
T ss_dssp ---CTTEEEEEETTSEEEEEETTT-CCEEEEEECCCSC----CCC-----CC---EEECTTTCCEEEC-----CCSEE--
T ss_pred CeeeCCEEEEEcCCCEEEEEECCC-CCEEEEecCCCce----ecceEcCCCE---EEEeCCCCEEEEEECCCCceeee--
Confidence 345788999999999999999887 6221111112221 1223455553 56778999999999999873210
Q ss_pred ccCCcceeeeee-eee--eccceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeC
Q 046773 278 LTDHNTVMGWRM-LTE--FTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVEN 354 (453)
Q Consensus 278 l~~~~~v~~w~~-l~~--h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~ 354 (453)
|.. ... ...++- ...+.+++++.+++|..||++||+++.+...+. ...+.++++.+++++.
T Consensus 75 ---------~~~~~~~~~~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~ 138 (369)
T 2hz6_A 75 ---------LPFTIPELVQASPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRT 138 (369)
T ss_dssp ---------CSCCHHHHHTTCSCC--------CCCCEEEEEEEEECCC--------------------------EEEEEE
T ss_pred ---------eeccCccccccCceE---ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEec
Confidence 000 000 011111 022335566777899999999998765543221 1234567788888888
Q ss_pred CCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCC---CeEEEEeC-CeEEEEECCCCeEEEEec
Q 046773 355 RELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQ---GYALMCVE-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 355 dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~---~~lls~s~-~tIrlWD~~tG~~l~tL~ 421 (453)
++ .+..||..+|+.+..+.... ....+...+. +.++.++. +.|+.||.++|+.+.++.
T Consensus 139 dg-------~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 139 EY-------TITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EE-------EEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred CC-------EEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 88 99999999998766554322 1111112211 45555555 999999999999988765
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.66 E-value=3.4e-06 Score=87.04 Aligned_cols=252 Identities=10% Similarity=-0.024 Sum_probs=147.1
Q ss_pred CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEe----------CCCCEEEEEeecCCcceEEeee
Q 046773 164 GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFAT----------LDGDIHVAVIDDVANETRTAHF 231 (453)
Q Consensus 164 ~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS----------~D~tIkvWd~~~~g~~~~~~~~ 231 (453)
++|-+.|+.|++.+.++.-... . .|++ |++.|+.+. .+++|.+.|..+ +....+...
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~--------P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t-~~vv~~I~v 167 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL--------P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT-FLPIADIEL 167 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS--------C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-CCEEEEEEE
T ss_pred CeEEEEECCCCEEEEEEECCCC--------C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-CcEEEEEEC
Confidence 7999999999999999863111 1 3554 566676655 367889998877 311111111
Q ss_pred c---ce--ecCceEEEEeCCCceeeEEEEeeC--CCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC
Q 046773 232 G---SV--MDDGVLIDFTGCSRYWVGLYAGLA--GRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS 304 (453)
Q Consensus 232 ~---~v--~~~~~~v~Fs~dg~~~~~LaSgS~--D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~ 304 (453)
+ .+ ......++|+|||++ |+.+.. +++|.|.|+++++...- +. +.+ ...+...+
T Consensus 168 ~g~~r~~~g~~P~~~~~spDGk~---lyV~n~~~~~~VsVID~~t~kvv~~--I~----------v~g----~~~~~p~g 228 (426)
T 3c75_H 168 PDAPRFLVGTYQWMNALTPDNKN---LLFYQFSPAPAVGVVDLEGKTFDRM--LD----------VPD----CYHIFPAS 228 (426)
T ss_dssp TTCCCCCBSCCGGGSEECTTSSE---EEEEECSSSCEEEEEETTTTEEEEE--EE----------CCS----EEEEEEEE
T ss_pred CCccccccCCCcceEEEcCCCCE---EEEEecCCCCeEEEEECCCCeEEEE--EE----------cCC----ceeeccCC
Confidence 1 00 001123789999997 555553 68999999999984310 00 000 00111111
Q ss_pred -CceEEEEcCCcEEEEECCCCceEEEE-----eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCee--E
Q 046773 305 -HESAVACTSSRVITFDLRNQGMVLGE-----RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEE--V 376 (453)
Q Consensus 305 -~~~~vas~d~tIrlWDl~t~~~~~~~-----~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~--v 376 (453)
...+..+.|+++-+-|+.+++...+. .+...-.....+.+++.+++..+..+ ++.+-|...... +
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g-------~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTG-------KIFQADLTAEGATFR 301 (426)
T ss_dssp TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTS-------EEEEEEECSSCEEEC
T ss_pred CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCC-------cEEEEeccCCceEEe
Confidence 22344466777777777555433111 00000000124677777777777666 777777654321 1
Q ss_pred EEEE----------ecCCCeeEEEEeeCCCeEEEEe-----------CCeEEEEECCCCeEEEEecccCCceEEEEecCC
Q 046773 377 CRFS----------LRADRNVNVMGCMNQGYALMCV-----------EGVIRVWEVEGGEYMYSFRERIGEEVIAFVGDD 435 (453)
Q Consensus 377 ~~l~----------~~~~~v~~~~~~~~~~~lls~s-----------~~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~ 435 (453)
..+. ..+...+.+.++++++++.... +++|-+.|++|++.+.++.......=-+|+||+
T Consensus 302 ~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg 381 (426)
T 3c75_H 302 APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDA 381 (426)
T ss_dssp CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSS
T ss_pred eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCC
Confidence 1111 1123334467888888766542 258999999999999988633222012788999
Q ss_pred C-EEEEE--eCCcEEEEecC
Q 046773 436 R-HVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 436 ~-~lasg--~D~~IklWDl~ 452 (453)
+ ++.++ .+++|-++|..
T Consensus 382 ~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 382 EPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp SCEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEcCCCCeEEEEECC
Confidence 9 88777 48999999974
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.64 E-value=1.2e-05 Score=77.54 Aligned_cols=192 Identities=11% Similarity=0.095 Sum_probs=116.3
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEE
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFD 320 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWD 320 (453)
..++|+++. .+++...+++|..||.++++... ..+...+.++++++++.+..+.+..|.+||
T Consensus 18 p~w~~~~~~--l~~~d~~~~~i~~~d~~~~~~~~----------------~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d 79 (297)
T 3g4e_A 18 PVWEEVSNS--LLFVDIPAKKVCRWDSFTKQVQR----------------VTMDAPVSSVALRQSGGYVATIGTKFCALN 79 (297)
T ss_dssp EEEETTTTE--EEEEETTTTEEEEEETTTCCEEE----------------EECSSCEEEEEEBTTSSEEEEETTEEEEEE
T ss_pred CeEECCCCE--EEEEECCCCEEEEEECCCCcEEE----------------EeCCCceEEEEECCCCCEEEEECCeEEEEE
Confidence 567776543 25677788999999999887321 012356888999988766666677899999
Q ss_pred CCCCceEEEEee--ccCCeEEE--EEEecCCEEEEEeCCCcc--ccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeC
Q 046773 321 LRNQGMVLGERG--YGRGLYVT--SVDVNAEAYIVVENRELE--NQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMN 394 (453)
Q Consensus 321 l~t~~~~~~~~g--~~~~~~v~--~~~~~g~~l~s~s~dg~~--~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~ 394 (453)
+++++....... ......+. .++++|+.+++....... .......+||.++....+..+.........++++++
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTT
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCC
Confidence 998754222111 11123333 456777766543322100 000124578877643223323222233467888899
Q ss_pred CCeEEEEeC--CeEEEEEC--CCCeE-----EEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEec
Q 046773 395 QGYALMCVE--GVIRVWEV--EGGEY-----MYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 395 ~~~lls~s~--~tIrlWD~--~tG~~-----l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
++.+..+.. +.|.+||+ ++|+. +..+..+.+. .. ++.++|++.++. .++.|.+||.
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~-p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI-PDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE-EEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCC-CCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 887765544 89999987 56653 2333333333 44 567899877777 6788999986
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.59 E-value=2.3e-06 Score=87.19 Aligned_cols=168 Identities=16% Similarity=0.117 Sum_probs=111.8
Q ss_pred EEEEEEc--CCeEEEEeCCCCEEEEEeecCC---------cce--EEeeecceecCceEEEEeCCCceeeEEEEeeCCCe
Q 046773 195 VSGIIIT--DSQLIFATLDGDIHVAVIDDVA---------NET--RTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRA 261 (453)
Q Consensus 195 V~~i~f~--g~~LasgS~D~tIkvWd~~~~g---------~~~--~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~t 261 (453)
+..++++ ...+++|+.| .++||+.+... ..+ ...+.. + ..|+| |+.+ |+.+ .|+.
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V----~~l~f--d~~~---L~v~-~~~~ 107 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-V----IFVCF--HGDQ---VLVS-TRNA 107 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-E----EEEEE--ETTE---EEEE-ESSE
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-e----eEEEE--CCCE---EEEE-cCCc
Confidence 3445554 4568888887 56779865411 111 111222 2 25899 7776 6777 8899
Q ss_pred EEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEE
Q 046773 262 FHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTS 341 (453)
Q Consensus 262 IrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~ 341 (453)
|++||+.+-... ..+..|...+..+++.+..+++++.|+++.+||+.++.... . . ..|.|
T Consensus 108 l~v~dv~sl~~~--------------~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~---~--~~Vs~ 167 (388)
T 1xip_A 108 LYSLDLEELSEF--------------RTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L---A--QNVTS 167 (388)
T ss_dssp EEEEESSSTTCE--------------EEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E---E--ESEEE
T ss_pred EEEEEchhhhcc--------------CccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c---c--CCceE
Confidence 999999875421 12334556677888776567777889999999999876532 1 1 23567
Q ss_pred EEecCCEEEEEeCCCccccCcceEEEEEcCCCee--EEEEE---------ecCCCeeEEEEeeCCCeEEEE
Q 046773 342 VDVNAEAYIVVENRELENQNRRLAIVRRVDTFEE--VCRFS---------LRADRNVNVMGCMNQGYALMC 401 (453)
Q Consensus 342 ~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~--v~~l~---------~~~~~v~~~~~~~~~~~lls~ 401 (453)
++.++++++++..|+ ++++|+.++++. ..++. .++..|.++.+.++..++++-
T Consensus 168 v~WSpkG~~vg~~dg-------~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 168 FDVTNSQLAVLLKDR-------SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEECSSEEEEEETTS-------CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCceEEEEcCC-------cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 777777799999999 999999888775 45551 134447777777777776653
No 219
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.56 E-value=3.6e-05 Score=83.65 Aligned_cols=284 Identities=8% Similarity=0.059 Sum_probs=157.5
Q ss_pred cCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCcccc--ccce-EEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEe
Q 046773 153 SDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQ--FSRA-VSGIIITDSQLIFATLDGDIHVAVIDDVANETRTA 229 (453)
Q Consensus 153 s~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~--~s~~-V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~ 229 (453)
.+..|..++.++.|.-+|++||+.+.++.......... .... -+++++.+.+|+.++.|+.+..+|..+ |...-+.
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~t-G~~~W~~ 143 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKT-GKAIWSQ 143 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTT-CCEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCC-CCEeeee
Confidence 45667777889999999999999998886432110000 0000 123456678888999999999999887 6111111
Q ss_pred eec-----ceecCceEEEEeCCCceeeEEEEeeC------CCeEEEeeCCCCcEEecccc-c-CCcce------------
Q 046773 230 HFG-----SVMDDGVLIDFTGCSRYWVGLYAGLA------GRAFHIWDRQAEEVFVGGDL-T-DHNTV------------ 284 (453)
Q Consensus 230 ~~~-----~v~~~~~~v~Fs~dg~~~~~LaSgS~------D~tIrvWD~~tg~~~~g~~l-~-~~~~v------------ 284 (453)
... ......-.|. +++ ++.++. ++.|..+|.+||+.+--... . ++...
T Consensus 144 ~~~~~~~~~~~~~~P~v~---~~~----v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV---KGK----VIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE---TTE----EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred ccCCCCCcceecCCCEEE---CCE----EEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccccccccccc
Confidence 110 0000000111 232 333332 58999999999994311000 0 00000
Q ss_pred ----eeeeeeeeeccceeEEEEcCC-c-eEEEEcCC-------------------cEEEEECCCCceEEEEe-e-cc---
Q 046773 285 ----MGWRMLTEFTEFVGRVRVTSH-E-SAVACTSS-------------------RVITFDLRNQGMVLGER-G-YG--- 334 (453)
Q Consensus 285 ----~~w~~l~~h~~~v~~v~~s~~-~-~~vas~d~-------------------tIrlWDl~t~~~~~~~~-g-~~--- 334 (453)
..|.. .+.......+.++++ + +++++.++ +|..+|++||+.+-... . |.
T Consensus 217 ~~g~~~w~~-~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd 295 (668)
T 1kv9_A 217 WQGDQYWKL-GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWD 295 (668)
T ss_dssp CCSSCHHHH-CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred CCccceeee-CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccc
Confidence 00100 011111234677653 2 34444333 49999999998765542 1 11
Q ss_pred ----CCeEEEEEEecCC---EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC-Cee-------------------
Q 046773 335 ----RGLYVTSVDVNAE---AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD-RNV------------------- 387 (453)
Q Consensus 335 ----~~~~v~~~~~~g~---~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~-~v~------------------- 387 (453)
.......+..+|+ .++.++.+| .+.+.|..||+.+....+.+. +..
T Consensus 296 ~~~~~~~~~~d~~~~G~~~~~v~~~~~~G-------~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~ 368 (668)
T 1kv9_A 296 FTATQQITLAELNIDGKPRKVLMQAPKNG-------FFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEK 368 (668)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTS-------EEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSS
T ss_pred ccCCCCcEEEEeccCCcEEEEEEEECCCC-------EEEEEECCCCCEeccccccccccccccccccCCccccccccccC
Confidence 1122233456665 467778888 999999999988755443320 000
Q ss_pred ----------------EEEEeeCCCeEEE-----------------------------------E-eC-CeEEEEECCCC
Q 046773 388 ----------------NVMGCMNQGYALM-----------------------------------C-VE-GVIRVWEVEGG 414 (453)
Q Consensus 388 ----------------~~~~~~~~~~lls-----------------------------------~-s~-~tIrlWD~~tG 414 (453)
.++++++.+.+.. . .. ++|..||+.||
T Consensus 369 ~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG 448 (668)
T 1kv9_A 369 EPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ 448 (668)
T ss_dssp SCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT
T ss_pred CeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC
Confidence 1233443333221 0 12 78999999999
Q ss_pred eEEEEecccCCceEEEEecCCCEEEEE-eCCcEEEEecC
Q 046773 415 EYMYSFRERIGEEVIAFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 415 ~~l~tL~gh~~~~V~a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
+.+-..+.+....--.+...+..|..+ .|+.|+.||..
T Consensus 449 ~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 449 KAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 998776543222011455667777778 89999999864
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.54 E-value=3.4e-06 Score=83.49 Aligned_cols=252 Identities=10% Similarity=-0.016 Sum_probs=132.4
Q ss_pred EEEEEecC--CEEEEEe--CCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcC-CeEEEEe-C-----CCCEE
Q 046773 147 CRCLTLSD--LYLACGF--ADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD-SQLIFAT-L-----DGDIH 215 (453)
Q Consensus 147 v~~lafs~--~~LaSGS--~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g-~~LasgS-~-----D~tIk 215 (453)
...+++++ +++++.. .++.++||.+.+|+ +..+....... ......+.+|++++ ..|.... . +..|.
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~-~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNA-IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSC-CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCc-ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 67888874 6778764 23447788877775 34442110000 00113577899974 3343333 2 57888
Q ss_pred EEEeecCC--cceEEeeeccee--cCceEEEEeCCCceeeEEEEee---CCCeEEEeeCCCCcEEecccccCCcceeeee
Q 046773 216 VAVIDDVA--NETRTAHFGSVM--DDGVLIDFTGCSRYWVGLYAGL---AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWR 288 (453)
Q Consensus 216 vWd~~~~g--~~~~~~~~~~v~--~~~~~v~Fs~dg~~~~~LaSgS---~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~ 288 (453)
+||..+ | +.++........ .....|+|+|++.. .+++.+ .+++|.+||.++++...
T Consensus 97 ~~d~~t-g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~--~yvtd~~~~~~~~i~v~d~~~g~~~r-------------- 159 (343)
T 2qe8_A 97 AWDTLN-NQLSRVIYLPPPITLSNSFVNDLAVDLIHNF--VYISDPAPDDKAALIRVDLQTGLAAR-------------- 159 (343)
T ss_dssp EEETTT-TEEEEEEECCTTTSCTTCCCCEEEEETTTTE--EEEEECCSGGGCEEEEEETTTCCEEE--------------
T ss_pred EEECCC-CeEEEEEECChhhcccccccceEEEecCCCE--EEEEcCccCCCCeEEEEECCCCCEEE--------------
Confidence 999876 4 222222111000 00124889986543 245555 68899999999887321
Q ss_pred eeeeeccce---eEEEEcCCceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceE
Q 046773 289 MLTEFTEFV---GRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA 365 (453)
Q Consensus 289 ~l~~h~~~v---~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i 365 (453)
.+.+|.... ..+.+.+..+.+.+.+++++.|... ..-.+++++++.+..++.++ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~--------------~~gia~s~dg~~ly~~~~~~-------~- 217 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLG--------------VNGIVLDAENEWLYLSPMHS-------T- 217 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCC--------------EEEEEECTTSCEEEEEESSC-------S-
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceeceecc--------------cceeEeccCCCEEEEEeCCC-------C-
Confidence 111221100 1111222222333455666666421 11156778887777766555 2
Q ss_pred EEEEcCCC-----e--------eEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEeccc-CCceEE-
Q 046773 366 IVRRVDTF-----E--------EVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRER-IGEEVI- 429 (453)
Q Consensus 366 ~Iw~~~tg-----~--------~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh-~~~~V~- 429 (453)
+||.+++. . .+..+ .+......+++++++...++... +.|.+||.++|+........ ... ..
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~-p~~ 295 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSW-TDS 295 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSC-EEE
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceec-CCe
Confidence 56655421 0 01111 11112345677777765555555 89999999778753333222 233 44
Q ss_pred -EEecCCCEEEEE
Q 046773 430 -AFVGDDRHVAAS 441 (453)
Q Consensus 430 -a~s~d~~~lasg 441 (453)
+|.+|++.+++.
T Consensus 296 va~~~~g~l~v~~ 308 (343)
T 2qe8_A 296 FNFGSDGYLYFDC 308 (343)
T ss_dssp EEECTTSCEEEEE
T ss_pred eEECCCCcEEEEe
Confidence 667888877665
No 221
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.51 E-value=5.2e-06 Score=84.61 Aligned_cols=175 Identities=11% Similarity=0.091 Sum_probs=114.6
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcE-EecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEE
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEV-FVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVIT 318 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~-~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrl 318 (453)
+++++++... |++|+.| .++||++++-+. +.. ....... ..+..+.. |.+|+|+. ..++.+.++.|++
T Consensus 42 lLais~~~gl---l~a~~~~-~l~v~~~~~l~~~~~~----~~~~~~~-~~~~~lp~-V~~l~fd~-~~L~v~~~~~l~v 110 (388)
T 1xip_A 42 NLDISNSKSL---FVAASGS-KAVVGELQLLRDHITS----DSTPLTF-KWEKEIPD-VIFVCFHG-DQVLVSTRNALYS 110 (388)
T ss_dssp CEEEETTTTE---EEEEETT-EEEEEEHHHHHHHHHS----SSCCCCC-SEEEECTT-EEEEEEET-TEEEEEESSEEEE
T ss_pred EEEEcCCCCE---EEEeCCC-EEEEEEhhHhhhhhcc----ccccccc-eEEeeCCC-eeEEEECC-CEEEEEcCCcEEE
Confidence 5889998875 7788887 577799765430 000 0000000 01234556 99999943 3444447789999
Q ss_pred EECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeE
Q 046773 319 FDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYA 398 (453)
Q Consensus 319 WDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~l 398 (453)
||+++.........+ ...+.++.+.+..+++++.|| ++.+|++.+++... + ...|+++.+++.| ..
T Consensus 111 ~dv~sl~~~~~~~~~--~~~v~~i~~~~p~~av~~~dG-------~L~v~dl~~~~~~~-~---~~~Vs~v~WSpkG-~~ 176 (388)
T 1xip_A 111 LDLEELSEFRTVTSF--EKPVFQLKNVNNTLVILNSVN-------DLSALDLRTKSTKQ-L---AQNVTSFDVTNSQ-LA 176 (388)
T ss_dssp EESSSTTCEEEEEEC--SSCEEEEEECSSEEEEEETTS-------EEEEEETTTCCEEE-E---EESEEEEEECSSE-EE
T ss_pred EEchhhhccCcccee--ecceeeEEecCCCEEEEECCC-------CEEEEEccCCcccc-c---cCCceEEEEcCCc-eE
Confidence 999876543333223 233556666665689999999 99999999887643 2 2358899999888 33
Q ss_pred EEEeCCeEEEEECCCCeE--EEEe------c---ccCCceEEE--EecCCCEEEE
Q 046773 399 LMCVEGVIRVWEVEGGEY--MYSF------R---ERIGEEVIA--FVGDDRHVAA 440 (453)
Q Consensus 399 ls~s~~tIrlWD~~tG~~--l~tL------~---gh~~~~V~a--~s~d~~~las 440 (453)
+.+.+++|++|+..++++ ..++ . +|... |.+ +.+++.++++
T Consensus 177 vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~-V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS-PLSVTILSPQDFLAV 230 (388)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE-EEEEEESSSSEEEEE
T ss_pred EEEcCCcEEEEcCCCccccccceecCCcccccccCCCee-EEEEEEecCCeEEEE
Confidence 333449999999998887 7777 2 35555 664 4578888876
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.50 E-value=3.6e-05 Score=75.56 Aligned_cols=188 Identities=9% Similarity=-0.000 Sum_probs=112.5
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEcCCcEEEEE
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFD 320 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~d~tIrlWD 320 (453)
.+|+|+++. .++++..++.|.+||.++++... + .+...+.++.+++++.+..+....|.+||
T Consensus 54 p~~~~~~~~--l~~~d~~~~~i~~~d~~~~~~~~---------------~-~~~~~v~~i~~~~dg~l~v~~~~gl~~~d 115 (326)
T 2ghs_A 54 PTFDPASGT--AWWFNILERELHELHLASGRKTV---------------H-ALPFMGSALAKISDSKQLIASDDGLFLRD 115 (326)
T ss_dssp EEEETTTTE--EEEEEGGGTEEEEEETTTTEEEE---------------E-ECSSCEEEEEEEETTEEEEEETTEEEEEE
T ss_pred CeEeCCCCE--EEEEECCCCEEEEEECCCCcEEE---------------E-ECCCcceEEEEeCCCeEEEEECCCEEEEE
Confidence 678898654 35677788999999999887321 0 11245778888877754444455699999
Q ss_pred CCCCceEEEEee-c-cCCeEEEE--EEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCC
Q 046773 321 LRNQGMVLGERG-Y-GRGLYVTS--VDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQG 396 (453)
Q Consensus 321 l~t~~~~~~~~g-~-~~~~~v~~--~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~ 396 (453)
+++++....... . .....+.. ++++|+.+++..... .......||.+++++. ..+.........++++++++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~---~~~~~~~l~~~~~g~~-~~~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK---AETGAGSIYHVAKGKV-TKLFADISIPNSICFSPDGT 191 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT---CCTTCEEEEEEETTEE-EEEEEEESSEEEEEECTTSC
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc---CCCCceEEEEEeCCcE-EEeeCCCcccCCeEEcCCCC
Confidence 998764322111 1 11233444 566676655433211 0011456666655543 33322223356778888888
Q ss_pred eEEEEeC--CeEEEEECC--CC-e-----EEEEecccCCceEE--EEecCCCEEEEE-eCCcEEEEec
Q 046773 397 YALMCVE--GVIRVWEVE--GG-E-----YMYSFRERIGEEVI--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 397 ~lls~s~--~tIrlWD~~--tG-~-----~l~tL~gh~~~~V~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
.+..+.. +.|.+||+. +| + .+..+.+..+. .. ++.++|++.++. .++.|.+||.
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~-p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGG-MDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSE-EEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCC-CCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 7765543 899999986 67 3 23334333333 44 456788877766 6788988875
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.48 E-value=0.00024 Score=71.53 Aligned_cols=250 Identities=12% Similarity=0.062 Sum_probs=139.5
Q ss_pred EEEecC--CEEEEEe----------CCCcEEEEECCCCeEEEEecCC-CCC-ccccccceEEEEEEcCCeEEEEeC--CC
Q 046773 149 CLTLSD--LYLACGF----------ADGAVRLFDLTTRLHVRTFRPQ-HSD-RLGQFSRAVSGIIITDSQLIFATL--DG 212 (453)
Q Consensus 149 ~lafs~--~~LaSGS----------~D~TIrlWD~~tg~~~~tl~gh-~~~-~~~~~s~~V~~i~f~g~~LasgS~--D~ 212 (453)
.++||+ ++|..+. .|++|-++|+.|++.+.++.-. ... ..+.....+ .+.+||+.|+.++. +.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~-~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMN-ANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccce-EECCCCCEEEEEecCCCC
Confidence 355554 5555553 4789999999999988776421 000 000000111 24456888888764 47
Q ss_pred CEEEEEeecCCcceEE-eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeee
Q 046773 213 DIHVAVIDDVANETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLT 291 (453)
Q Consensus 213 tIkvWd~~~~g~~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~ 291 (453)
+|.|.| .+ +....+ .... + .+.+.|+++. .+++.+.|+++.++|. +++...-... .+ ...
T Consensus 149 ~v~viD-~t-~~~~~~~i~~~-----~-~~~~~~~~~~--~~~~~~~dg~~~~vd~-~g~~~~~~~~-~~-------~~~ 209 (373)
T 2mad_H 149 AVGLVV-QG-GSSDDQLLSSP-----T-CYHIHPGAPS--TFYLLCAQGGLAKTDH-AGGAAGAGLV-GA-------MLT 209 (373)
T ss_pred eEEEEE-CC-CCEEeEEcCCC-----c-eEEEEeCCCc--eEEEEcCCCCEEEEEC-CCcEEEEEec-cc-------ccc
Confidence 799999 77 411111 1111 1 2456677654 2456678999999999 8773310000 00 000
Q ss_pred eeccce-eEEEEc--CCceEEEEcCCcEEEEECCCCceE--EEEe---------e-ccCCeEEEEEEecCCEEEEEeCCC
Q 046773 292 EFTEFV-GRVRVT--SHESAVACTSSRVITFDLRNQGMV--LGER---------G-YGRGLYVTSVDVNAEAYIVVENRE 356 (453)
Q Consensus 292 ~h~~~v-~~v~~s--~~~~~vas~d~tIrlWDl~t~~~~--~~~~---------g-~~~~~~v~~~~~~g~~l~s~s~dg 356 (453)
+ ..++ ....+. ++..+..+..+.|.+.|+.++... .+.. + .........++++++++..+...+
T Consensus 210 ~-~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~ 288 (373)
T 2mad_H 210 A-AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQ 288 (373)
T ss_pred C-CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccC
Confidence 0 0111 111222 223444455567888888654211 1110 0 011122356788888776654322
Q ss_pred ccc---cCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCC-eEEEEe-C-CeEEEEECCCCeEEEEe
Q 046773 357 LEN---QNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQG-YALMCV-E-GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 357 ~~~---~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~-~lls~s-~-~tIrlWD~~tG~~l~tL 420 (453)
.+. ...+++.|.|..+++.+.++.... ....+.+++|++ .++++. . ++|.++|+++++.+.++
T Consensus 289 ~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 289 SAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 100 012378888999998888886432 356889999999 566665 3 99999999999998874
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=6.4e-06 Score=83.36 Aligned_cols=251 Identities=8% Similarity=-0.101 Sum_probs=141.7
Q ss_pred EEEEEeCCC----cEEEEECCCCeEEEEecCCCCCccccccceEEEEEE--cCCeEEEEe----------CCCCEEEEEe
Q 046773 156 YLACGFADG----AVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII--TDSQLIFAT----------LDGDIHVAVI 219 (453)
Q Consensus 156 ~LaSGS~D~----TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f--~g~~LasgS----------~D~tIkvWd~ 219 (453)
..++-..++ +|-+.|..|++.+.++..... . .++| |++.|+.+. .|++|.++|.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~--------P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~ 103 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL--------S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP 103 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT--------C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCC--------C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 455555555 888999999999999863221 1 2555 577777765 3788999998
Q ss_pred ecCC--cceEEee-ecc--eecCceEEEEeCCCceeeEEEEeeC--CCeEEE--eeCCCCcEEecccccCCcceeeeeee
Q 046773 220 DDVA--NETRTAH-FGS--VMDDGVLIDFTGCSRYWVGLYAGLA--GRAFHI--WDRQAEEVFVGGDLTDHNTVMGWRML 290 (453)
Q Consensus 220 ~~~g--~~~~~~~-~~~--v~~~~~~v~Fs~dg~~~~~LaSgS~--D~tIrv--WD~~tg~~~~g~~l~~~~~v~~w~~l 290 (453)
.+ + +.++... ... ...+...++|+|||++ |+.+.. +.+|.| +|+++-..+. + +
T Consensus 104 ~T-~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~---lyVan~~~~~~v~V~~iD~~tv~~i~---v--~--------- 165 (368)
T 1mda_H 104 VT-FLPIADIELPDAPRFSVGPRVHIIGNCASSAC---LLFFLFGSSAAAGLSVPGASDDQLTK---S--A--------- 165 (368)
T ss_dssp TT-CCEEEEEEETTSCSCCBSCCTTSEEECTTSSC---EEEEECSSSCEEEEEETTTEEEEEEE---C--S---------
T ss_pred CC-CCEEEEEECCCccccccCCCcceEEEcCCCCE---EEEEccCCCCeEEEEEEchhhceEEE---C--C---------
Confidence 87 4 2222221 000 0011224899999998 555543 467888 9998711111 0 0
Q ss_pred eeeccceeEEEEcCCce-EEEEcCCcEEEEECCC-----CceEEE----E-eeccCCeEEEEEEecCCEEEEEeCCCccc
Q 046773 291 TEFTEFVGRVRVTSHES-AVACTSSRVITFDLRN-----QGMVLG----E-RGYGRGLYVTSVDVNAEAYIVVENRELEN 359 (453)
Q Consensus 291 ~~h~~~v~~v~~s~~~~-~vas~d~tIrlWDl~t-----~~~~~~----~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~ 359 (453)
+ +..+..+++.. ++.|.|+++-+-|+++ ++...+ . .+. ... . .+++..++.++. +
T Consensus 166 -~----~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~---~P~-~-~~~~~~~~~vs~-~--- 231 (368)
T 1mda_H 166 -S----CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS---QAA-Q-ANYPGMLVWAVA-S--- 231 (368)
T ss_dssp -S----CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCS---CCE-E-ETTTTEEEECBS-S---
T ss_pred -C----ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCC---Ccc-c-cccCCEEEEEcC-C---
Confidence 0 00011122222 3335566666677776 221100 0 111 111 2 556666666666 6
Q ss_pred cCcceEEEEEcCCCe--eEEEEEe----------cCCCeeEEEEeeCCCeEEEE-e---------CCeEEEEECCCCeEE
Q 046773 360 QNRRLAIVRRVDTFE--EVCRFSL----------RADRNVNVMGCMNQGYALMC-V---------EGVIRVWEVEGGEYM 417 (453)
Q Consensus 360 ~~~~~i~Iw~~~tg~--~v~~l~~----------~~~~v~~~~~~~~~~~lls~-s---------~~tIrlWD~~tG~~l 417 (453)
++.+-|..+.+ .+..+.+ .|...+.+.++++++++..+ . ++.+.++|++|++.+
T Consensus 232 ----~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv 307 (368)
T 1mda_H 232 ----SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS 307 (368)
T ss_dssp ----CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE
T ss_pred ----EEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE
Confidence 66666665432 1111111 12222336788888877643 2 224559999999999
Q ss_pred EEecccCCceEEEEecCCCE-EEEE--eCCcEEEEecC
Q 046773 418 YSFRERIGEEVIAFVGDDRH-VAAS--CGTNIHLWDFG 452 (453)
Q Consensus 418 ~tL~gh~~~~V~a~s~d~~~-lasg--~D~~IklWDl~ 452 (453)
.+++......=.+|+||+++ +++. .+++|.++|+.
T Consensus 308 ~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 308 GPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp ECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred EEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 98864432211278899985 4444 38999999975
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.44 E-value=0.0001 Score=71.11 Aligned_cols=221 Identities=7% Similarity=-0.088 Sum_probs=123.4
Q ss_pred EEEEE--cCC-eEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcE
Q 046773 196 SGIII--TDS-QLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEV 272 (453)
Q Consensus 196 ~~i~f--~g~-~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~ 272 (453)
.+.++ +++ .++++..++.|..|+.+. ....+..+...+ ..++|+++|+. +++...++.|.+||.. |+.
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~~~~~~~~~~~----~gl~~d~dG~l---~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWREDG-TVDVLLDATAFT----NGNAVDAQQRL---VHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETTS-CEEEEEESCSCE----EEEEECTTSCE---EEEETTTTEEEEECTT-SCE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeCCC-CEEEEeCCCCcc----ceeeECCCCCE---EEEECCCCEEEEECCC-CCE
Confidence 44555 455 466677788898888632 233333322221 24899999985 3343455789999986 652
Q ss_pred --EecccccCCcceeeeeeeeee-ccceeEEEEcCCceEEEEc-------------------CCcEEEEECCCCceEEEE
Q 046773 273 --FVGGDLTDHNTVMGWRMLTEF-TEFVGRVRVTSHESAVACT-------------------SSRVITFDLRNQGMVLGE 330 (453)
Q Consensus 273 --~~g~~l~~~~~v~~w~~l~~h-~~~v~~v~~s~~~~~vas~-------------------d~tIrlWDl~t~~~~~~~ 330 (453)
+.. ...+. ...++.+.+++++.+..++ .+.|..+|.++++.....
T Consensus 119 ~~~~~-------------~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 119 HLLVG-------------RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp EEEEC-------------EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred EEEEe-------------ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 210 00011 1345678899887655532 135777888776543222
Q ss_pred eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEE---EEE-ecCCCeeEEEEeeCCCeEEEEeCCeE
Q 046773 331 RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVC---RFS-LRADRNVNVMGCMNQGYALMCVEGVI 406 (453)
Q Consensus 331 ~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~---~l~-~~~~~v~~~~~~~~~~~lls~s~~tI 406 (453)
+ .....-.+|+++++.+..+...... .....|.+++++.+. +. .+. ........+...+++...+ +..+.|
T Consensus 186 -~-~~~p~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~gv 260 (305)
T 3dr2_A 186 -D-LDHPNGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGTGV 260 (305)
T ss_dssp -E-ESSEEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEE-CCSSEE
T ss_pred -c-CCCCcceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEE-ecCCcE
Confidence 1 1122235778888877666544100 001177888877543 21 111 1111223456666766443 334559
Q ss_pred EEEECCCCeEEEEecccCCceEE-EEecCCCEEEEE-eCCc
Q 046773 407 RVWEVEGGEYMYSFRERIGEEVI-AFVGDDRHVAAS-CGTN 445 (453)
Q Consensus 407 rlWD~~tG~~l~tL~gh~~~~V~-a~s~d~~~lasg-~D~~ 445 (453)
.+||. +|+.+..+..+... .. +|++|++.|..+ .++.
T Consensus 261 ~~~~~-~g~~~~~~~~~~~~-~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 261 CVFDS-DGQLLGHIPTPGTA-SNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEECT-TSCEEEEEECSSCC-CEEEECTTSCEEEEEETTEE
T ss_pred EEECC-CCCEEEEEECCCce-eEEEEeCCCCEEEEEcCCeE
Confidence 99998 58888777655432 22 677899887666 5533
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.44 E-value=8.7e-05 Score=72.76 Aligned_cols=207 Identities=9% Similarity=-0.016 Sum_probs=115.6
Q ss_pred eEEEEeCCCCEEEEEeecCC-cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCc
Q 046773 204 QLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHN 282 (453)
Q Consensus 204 ~LasgS~D~tIkvWd~~~~g-~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~ 282 (453)
.+++...++.|.+||.++ + ...+. ....+ ..++|+|+|+++ ++ + +..|.+||.++++...-......
T Consensus 63 l~~~d~~~~~i~~~d~~~-~~~~~~~-~~~~v----~~i~~~~dg~l~---v~-~-~~gl~~~d~~~g~~~~~~~~~~~- 130 (326)
T 2ghs_A 63 AWWFNILERELHELHLAS-GRKTVHA-LPFMG----SALAKISDSKQL---IA-S-DDGLFLRDTATGVLTLHAELESD- 130 (326)
T ss_dssp EEEEEGGGTEEEEEETTT-TEEEEEE-CSSCE----EEEEEEETTEEE---EE-E-TTEEEEEETTTCCEEEEECSSTT-
T ss_pred EEEEECCCCEEEEEECCC-CcEEEEE-CCCcc----eEEEEeCCCeEE---EE-E-CCCEEEEECCCCcEEEEeeCCCC-
Confidence 455566678888888776 4 11111 11111 247899999863 22 3 34599999998873110000000
Q ss_pred ceeeeeeeeeeccceeEEEEcCCceEE-EEcC-----CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEE-eCC
Q 046773 283 TVMGWRMLTEFTEFVGRVRVTSHESAV-ACTS-----SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVV-ENR 355 (453)
Q Consensus 283 ~v~~w~~l~~h~~~v~~v~~s~~~~~v-as~d-----~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~-s~d 355 (453)
.....++.+.+++++.+. ++.+ ...+||.+.+++ +...........-.+++++++.+..+ +.+
T Consensus 131 ---------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 131 ---------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ---------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred ---------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 001347788999887543 3321 234555444443 22221111122335677788766444 444
Q ss_pred CccccCcceEEEEEcC--CC-ee--EEEE-Ee--cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCc
Q 046773 356 ELENQNRRLAIVRRVD--TF-EE--VCRF-SL--RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGE 426 (453)
Q Consensus 356 g~~~~~~~~i~Iw~~~--tg-~~--v~~l-~~--~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~ 426 (453)
+ .|.+++.+ ++ +. ...+ .+ .......+...+++...++... +.|.+||. +|+.+..+..+...
T Consensus 201 ~-------~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~ 272 (326)
T 2ghs_A 201 N-------RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ 272 (326)
T ss_dssp C-------EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB
T ss_pred C-------EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC
Confidence 5 78888876 56 31 1122 11 1222455666677766666555 88999998 68888887766655
Q ss_pred eEE--EEe-cCCCEE-EEE
Q 046773 427 EVI--AFV-GDDRHV-AAS 441 (453)
Q Consensus 427 ~V~--a~s-~d~~~l-asg 441 (453)
+. +|+ +|++.| ++.
T Consensus 273 -~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 273 -TTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp -EEEEEEESTTSCEEEEEE
T ss_pred -cEEEEEecCCCCEEEEEe
Confidence 65 566 787766 444
No 227
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.41 E-value=0.00042 Score=65.15 Aligned_cols=226 Identities=7% Similarity=-0.082 Sum_probs=128.9
Q ss_pred eEEEEEEc--CCeEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc
Q 046773 194 AVSGIIIT--DSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE 271 (453)
Q Consensus 194 ~V~~i~f~--g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~ 271 (453)
...+|+++ |...++...++.|.++|.+. ....+..... ......++++++|+.+ ++...++.|.++|.. ++
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~--~~~~~~i~~~~~g~l~---v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQSG-RIKEFEVPTP--DAKVMCLIVSSLGDIW---FTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEECSST--TCCEEEEEECTTSCEE---EEETTTTEEEEECTT-SC
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCCC-ceEEEECCCC--CCcceeEEECCCCCEE---EEecCCCeEEEECCC-CC
Confidence 34567775 45555555678888888652 1111111100 0112247889999853 344557889999987 65
Q ss_pred EEecccccCCcceeeeeeeeeeccceeEEEEcCCc-eEEEEc-CCcEEEEECCCCceEEE-EeeccCCeEEEEEEecCCE
Q 046773 272 VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE-SAVACT-SSRVITFDLRNQGMVLG-ERGYGRGLYVTSVDVNAEA 348 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~-~~vas~-d~tIrlWDl~t~~~~~~-~~g~~~~~~v~~~~~~g~~ 348 (453)
... ..+......+..+++++++ +.++.. ++.|..+|.+ ++.... .........-.+++++++.
T Consensus 94 ~~~-------------~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 94 FTE-------------YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp EEE-------------EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred eEE-------------ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 211 0011112446778888765 445544 4689999998 554322 1111222233445666775
Q ss_pred EEEEeCCCccccCcceEEEEEcCCCeeEEEEEe--cCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEE-EecccC
Q 046773 349 YIVVENRELENQNRRLAIVRRVDTFEEVCRFSL--RADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMY-SFRERI 424 (453)
Q Consensus 349 l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~--~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~-tL~gh~ 424 (453)
+++...++ .+.+++. +++.. .+.. .......+++.+++...++... +.|.++|. +|+... .+..+.
T Consensus 160 ~v~~~~~~-------~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 160 WFTENQNN-------SIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPN 229 (300)
T ss_dssp EEEETTTT-------EEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred EEEecCCC-------eEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCC
Confidence 55544455 6777776 44433 2332 1233566777777655555444 78999999 665543 344344
Q ss_pred CceEE--EEecCCCEEEEE-eCCcEEEEec
Q 046773 425 GEEVI--AFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 425 ~~~V~--a~s~d~~~lasg-~D~~IklWDl 451 (453)
.. +. ++.++++..++. .++.|..+|.
T Consensus 230 ~~-~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 230 AR-PHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CC-EEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CC-ceEEEECCCCCEEEeccCCCeEEEECC
Confidence 44 55 556888877777 6788888874
No 228
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.37 E-value=4.5e-08 Score=70.89 Aligned_cols=47 Identities=19% Similarity=0.399 Sum_probs=38.8
Q ss_pred cchHHHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhccCCchhHHHh
Q 046773 43 EPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRL 93 (453)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l~~~~~~w~~~ 93 (453)
.+.++.||.|+..+|+.||+ .++|+.+++||++|+.++.++.+|+++
T Consensus 6 ~~~~~~LP~eil~~I~~~L~----~~dl~~~~~Vck~w~~~~~~~~lW~~l 52 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLC----LPELLKVSGVCKRWYRLASDESLWQTL 52 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSC----GGGHHHHHTTCHHHHHHHTCGGGC---
T ss_pred CCCHHHCCHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHhCChHHHHhc
Confidence 34457899999999999987 679999999999999999999999754
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.32 E-value=0.00015 Score=73.76 Aligned_cols=241 Identities=10% Similarity=0.112 Sum_probs=130.3
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCC--ccccccceEEEEEEcCCeEEEEeC--CCCEEEEEeecCC--cceEEeeeccee
Q 046773 162 ADGAVRLFDLTTRLHVRTFRPQHSD--RLGQFSRAVSGIIITDSQLIFATL--DGDIHVAVIDDVA--NETRTAHFGSVM 235 (453)
Q Consensus 162 ~D~TIrlWD~~tg~~~~tl~gh~~~--~~~~~s~~V~~i~f~g~~LasgS~--D~tIkvWd~~~~g--~~~~~~~~~~v~ 235 (453)
.+++|.+||+.|++.+.++.-..+. ..+.....+ ++..||+.|..+.. +++|-|.|+.+ + +.++.. .
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~-a~spDGk~lyVan~~~~~~VsVID~~t-~~vv~tI~v--~--- 179 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT-SLTPDGKTLLFYQFSPAPAVGVVDLEG-KAFKRMLDV--P--- 179 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGE-EECTTSSEEEEEECSSSCEEEEEETTT-TEEEEEEEC--C---
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceE-EEcCCCCEEEEEEcCCCCeEEEEECCC-CcEEEEEEC--C---
Confidence 4789999999999999887421100 000001111 24456888776653 68899999887 3 122211 0
Q ss_pred cCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCC-CcEEecc-cccCCcceeeeeeeeeeccce-eEEEEc-CCc-eEEE
Q 046773 236 DDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQA-EEVFVGG-DLTDHNTVMGWRMLTEFTEFV-GRVRVT-SHE-SAVA 310 (453)
Q Consensus 236 ~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~t-g~~~~g~-~l~~~~~v~~w~~l~~h~~~v-~~v~~s-~~~-~~va 310 (453)
++...+ |.|.. .+++.+.|+++-+.++.+ ++..... ...++. ..++ +...|. +++ ++..
T Consensus 180 --g~~~~~-P~g~~--~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~-----------~~~~~~~~~~~~~dG~~~~v 243 (386)
T 3sjl_D 180 --DCYHIF-PTAPD--TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE-----------DEFLINHPAYSQKAGRLVWP 243 (386)
T ss_dssp --SEEEEE-EEETT--EEEEEETTSCEEEEECCSSSCCEEEECCCCSCT-----------TSCBCSCCEEETTTTEEEEE
T ss_pred --Ccceee-cCCCc--eeEEECCCCCEEEEECCCCCeEEEeecceeccc-----------cccccccceeEcCCCcEEEE
Confidence 000111 22111 133455566666666654 4421100 000000 0111 112342 455 4456
Q ss_pred EcCCcEEEEECCCCce-E-EEEe---------e-ccCCeEEEEEEecCCEEEEEeCC-CccccC--cceEEEEEcCCCee
Q 046773 311 CTSSRVITFDLRNQGM-V-LGER---------G-YGRGLYVTSVDVNAEAYIVVENR-ELENQN--RRLAIVRRVDTFEE 375 (453)
Q Consensus 311 s~d~tIrlWDl~t~~~-~-~~~~---------g-~~~~~~v~~~~~~g~~l~s~s~d-g~~~~~--~~~i~Iw~~~tg~~ 375 (453)
+.+++|.+.|+.++.. + .+.. + ........+++++++++..+..+ ++..+. .+.|-+-|..|++.
T Consensus 244 s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv 323 (386)
T 3sjl_D 244 TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER 323 (386)
T ss_dssp BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE
Confidence 6678999999976542 1 1111 0 00011235678888887665431 111111 23566778888988
Q ss_pred EEEEEecCCCeeEEEEeeCCC-eEEEEeC--CeEEEEECCCCeEEEEec--ccCCc
Q 046773 376 VCRFSLRADRNVNVMGCMNQG-YALMCVE--GVIRVWEVEGGEYMYSFR--ERIGE 426 (453)
Q Consensus 376 v~~l~~~~~~v~~~~~~~~~~-~lls~s~--~tIrlWD~~tG~~l~tL~--gh~~~ 426 (453)
+..+.... ...++.+++|++ +++++.. ++|.+.|+++++.+.++. +|...
T Consensus 324 ~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~ 378 (386)
T 3sjl_D 324 LAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQ 378 (386)
T ss_dssp EEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCC
T ss_pred EEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCce
Confidence 88876532 356889999987 5555543 999999999999999885 44444
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.30 E-value=0.00032 Score=67.71 Aligned_cols=184 Identities=8% Similarity=0.031 Sum_probs=117.4
Q ss_pred EEEeCCCceeeEEEEee-CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc-CCcEEE
Q 046773 241 IDFTGCSRYWVGLYAGL-AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT-SSRVIT 318 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS-~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~-d~tIrl 318 (453)
++|+|||+.+ ..+|. .+++|++.|++|++...-.. +..+ ...-.+.++++.+.++.. +++|-+
T Consensus 26 l~~~~dg~Ly--vstg~~~~s~v~~iD~~tg~v~~~i~------------l~~~-~fgeGi~~~g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 26 LVYAENDTLF--ESTGLYGRSSVRQVALQTGKVENIHK------------MDDS-YFGEGLTLLNEKLYQVVWLKNIGFI 90 (266)
T ss_dssp EEECSTTEEE--EEECSTTTCEEEEEETTTCCEEEEEE------------CCTT-CCEEEEEEETTEEEEEETTCSEEEE
T ss_pred EEEeCCCeEE--EECCCCCCCEEEEEECCCCCEEEEEe------------cCCC-cceEEEEEeCCEEEEEEecCCEEEE
Confidence 7899987531 22231 36899999999999542100 1111 112246667777777775 478999
Q ss_pred EECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC-----CeeEEEEe
Q 046773 319 FDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD-----RNVNVMGC 392 (453)
Q Consensus 319 WDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~-----~v~~~~~~ 392 (453)
+|++|.+.+.+. .+...+ ..++++|+.++.+..++ ++.+.|.++.+.+..+..... ....+.+.
T Consensus 91 iD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~-------~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQMKDG---WGLATDGKILYGSDGTS-------ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp EETTTTEEEEEEECCSSSC---CEEEECSSSEEEECSSS-------EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EECCCCcEEEEEECCCCCe---EEEEECCCEEEEECCCC-------eEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 999998776665 231222 45788888877665555 888999999887777654321 12344444
Q ss_pred eCCCeEEEEe-C-CeEEEEECCCCeEEEEeccc------------CCceEE--EEecCCCEE-EEE-eCCcEEEEec
Q 046773 393 MNQGYALMCV-E-GVIRVWEVEGGEYMYSFRER------------IGEEVI--AFVGDDRHV-AAS-CGTNIHLWDF 451 (453)
Q Consensus 393 ~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh------------~~~~V~--a~s~d~~~l-asg-~D~~IklWDl 451 (453)
++ ++.+.. . ++|.+=|++||+.+.++.-. .....+ ++.|++++| +++ ..++|.+-|+
T Consensus 161 -dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 161 -NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp -TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred -CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 44 555444 3 89999999999998888521 011134 778998755 677 6777766554
No 231
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.30 E-value=2.2e-07 Score=90.54 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhccCCchhHHHhhhhc
Q 046773 45 FVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRI 97 (453)
Q Consensus 45 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l~~~~~~w~~~~~~~ 97 (453)
|++.||.|+.++|++||. +++||.+++||++||.+++|+.||+.+|.+.
T Consensus 4 ~l~~LP~ei~l~IlsfL~----p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLS----PHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHHHSCHHHHHHHHHTSC----HHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred hhHhCCHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 689999999999999998 8899999999999999999999999999874
No 232
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.26 E-value=2.7e-07 Score=90.48 Aligned_cols=74 Identities=15% Similarity=0.313 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHhhhhhhHhHhhhh-hHHhhcccchhccCCchhHHHhhhhcc--CC--CCcCcchhHHHHHHHhhhhh
Q 046773 46 VEALAAQVAIEASRSVGRLAAAAALA-NVFQVCSTWRAVSRSDLLWHRLTRRIW--GR--TNLLHATWRDEYIYRHRTAQ 120 (453)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~~~l~-~~aqv~~~W~~l~~~~~~w~~~~~~~~--~~--~~~~~~~Wk~~y~~~~~~~~ 120 (453)
++.||.|+..+|+++|. +++|+ ++++||++|+.|++++.+|+++|++.+ +. ..+...+||..|..+ +..+
T Consensus 51 ~~~LP~ell~~Il~~Lp----~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~Wk~~y~~~-~~gR 125 (297)
T 2e31_A 51 LAELPEPLLLRVLAELP----ATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFLS-KRRR 125 (297)
T ss_dssp TTSSCHHHHHHHHHTSC----HHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHTTCCCC-----CCSCHHHHHHHH-HHCC
T ss_pred hhhCCHHHHHHHHHcCC----HHHHHHHHHHHhHHHHHHhcChHHHHHHhhccCcccccccCCCCCChhhhhehe-eccc
Confidence 57799999999999987 78999 999999999999999999999998753 11 123567899999885 5566
Q ss_pred cccc
Q 046773 121 NFRT 124 (453)
Q Consensus 121 nw~~ 124 (453)
|+-+
T Consensus 126 NLL~ 129 (297)
T 2e31_A 126 NLLR 129 (297)
T ss_dssp CCSS
T ss_pred ceee
Confidence 6444
No 233
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.26 E-value=0.00037 Score=67.21 Aligned_cols=215 Identities=8% Similarity=-0.028 Sum_probs=122.4
Q ss_pred EEEEEecC--C-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEeCCCCEEEEEeec
Q 046773 147 CRCLTLSD--L-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFATLDGDIHVAVIDD 221 (453)
Q Consensus 147 v~~lafs~--~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS~D~tIkvWd~~~ 221 (453)
.....|++ + +++++..++.|..||. +|+ +.++..+.. .+.+++++ |+.+++...++.|.+++.+.
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~--------~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g 116 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATA--------FTNGNAVDAQQRLVHCEHGRRAITRSDADG 116 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCS--------CEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCC--------ccceeeECCCCCEEEEECCCCEEEEECCCC
Confidence 45677764 5 7888989999999998 565 344443221 35678876 55444444457788887642
Q ss_pred CCcceEEeeeccee-cCceEEEEeCCCceeeEEEE----eeC-------------CCeEEEeeCCCCcEEecccccCCcc
Q 046773 222 VANETRTAHFGSVM-DDGVLIDFTGCSRYWVGLYA----GLA-------------GRAFHIWDRQAEEVFVGGDLTDHNT 283 (453)
Q Consensus 222 ~g~~~~~~~~~~v~-~~~~~v~Fs~dg~~~~~LaS----gS~-------------D~tIrvWD~~tg~~~~g~~l~~~~~ 283 (453)
....+..+..... .....++++|+|+.| +| |+. .+.|..+|.++++...
T Consensus 117 -~~~~~~~~~~~~~~~~~~~i~~d~dG~l~---~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~--------- 183 (305)
T 3dr2_A 117 -QAHLLVGRYAGKRLNSPNDLIVARDGAIW---FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR--------- 183 (305)
T ss_dssp -CEEEEECEETTEECSCCCCEEECTTSCEE---EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE---------
T ss_pred -CEEEEEeccCCCccCCCCCEEECCCCCEE---EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE---------
Confidence 1222222211111 111237899999863 44 332 2457777777776211
Q ss_pred eeeeeeeeeeccceeEEEEcCCc--eEEEEcC------CcEEEEECCCCceEEEE-ee-c--cCCeEEEEEEecCCEEEE
Q 046773 284 VMGWRMLTEFTEFVGRVRVTSHE--SAVACTS------SRVITFDLRNQGMVLGE-RG-Y--GRGLYVTSVDVNAEAYIV 351 (453)
Q Consensus 284 v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d------~tIrlWDl~t~~~~~~~-~g-~--~~~~~v~~~~~~g~~l~s 351 (453)
+. .....+.++|+|++ ++++... ..|.+||+..++ +... .. . .....-.+++.+|+.+++
T Consensus 184 ------~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 184 ------MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS 255 (305)
T ss_dssp ------EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC
T ss_pred ------Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe
Confidence 11 22345778999886 4455444 579999998654 2111 00 0 000001356667774433
Q ss_pred EeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC
Q 046773 352 VENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE 403 (453)
Q Consensus 352 ~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~ 403 (453)
+ .+ -|.+++. .++.+..+.... .+..+++.++++.+..++.
T Consensus 256 -~-~~-------gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 256 -S-GT-------GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp -C-SS-------EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEET
T ss_pred -c-CC-------cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcC
Confidence 3 33 4677776 466666665443 5677888877777776665
No 234
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.23 E-value=0.0012 Score=71.74 Aligned_cols=274 Identities=11% Similarity=0.088 Sum_probs=144.5
Q ss_pred EEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCC-ccccccceEEEEEEcCCeEEEEeC------CCCEEEEEeecC
Q 046773 150 LTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSD-RLGQFSRAVSGIIITDSQLIFATL------DGDIHVAVIDDV 222 (453)
Q Consensus 150 lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~-~~~~~s~~V~~i~f~g~~LasgS~------D~tIkvWd~~~~ 222 (453)
+++.+.+|..++.|+.|..+|++||+.+.++...... .+...+.. + ..+.+++.++. ++.|..+|..+
T Consensus 113 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P---~-v~~~~v~vg~~~~~~~~~g~v~a~D~~t- 187 (668)
T 1kv9_A 113 VALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAP---R-VVKGKVIIGNGGAEYGVRGFVSAYDADT- 187 (668)
T ss_dssp CEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCC---E-EETTEEEECCBCTTTCCBCEEEEEETTT-
T ss_pred eEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCC---E-EECCEEEEeCCCCCcCCCCEEEEEECCC-
Confidence 3445678888999999999999999998887642110 01100001 1 22445555443 47788888777
Q ss_pred CcceEEeee--cc---------e------e---------cCc---eEEEEeCCCceeeEEEEeeCCC-------------
Q 046773 223 ANETRTAHF--GS---------V------M---------DDG---VLIDFTGCSRYWVGLYAGLAGR------------- 260 (453)
Q Consensus 223 g~~~~~~~~--~~---------v------~---------~~~---~~v~Fs~dg~~~~~LaSgS~D~------------- 260 (453)
|...-+... +. + . ..+ ..++|+|++.. ++.++.++
T Consensus 188 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~---vy~~~~~g~~w~~~~~~~~~g 264 (668)
T 1kv9_A 188 GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDL---LYVGTGNGSPWNREVRSPGGG 264 (668)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTE---EEEECCCEESSCHHHHSTTCC
T ss_pred CcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCE---EEEeCCCCCccccCCCCCCCC
Confidence 511111111 00 0 0 000 13678887664 55666554
Q ss_pred ------eEEEeeCCCCcEEecccccCCcceeeeeeeeeecccee--EEEEcCC---ceEEEEcCCcEEEEECCCCceEEE
Q 046773 261 ------AFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVG--RVRVTSH---ESAVACTSSRVITFDLRNQGMVLG 329 (453)
Q Consensus 261 ------tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~--~v~~s~~---~~~vas~d~tIrlWDl~t~~~~~~ 329 (453)
+|..+|.+||+..--.....+. .|.. ....+.. .+.++++ -+++++.++.+.++|.+||+.+.+
T Consensus 265 d~l~~~~v~AlD~~tG~~~W~~~~~~~~---~wd~--~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 265 DNLYLSSILAIRPDTGKLAWHYQVTPGD---SWDF--TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEESSTTC---CSCC--CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CceeeeeEEEEcCCCCceeeEeecCCCc---cccc--cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence 4999999999943100000000 0000 0011111 1223332 134445668999999999987633
Q ss_pred EeeccC----------CeE--------------------------EEEEEecCCEEEEEeCC------------------
Q 046773 330 ERGYGR----------GLY--------------------------VTSVDVNAEAYIVVENR------------------ 355 (453)
Q Consensus 330 ~~g~~~----------~~~--------------------------v~~~~~~g~~l~s~s~d------------------ 355 (453)
...... ... -.+++++...+.....+
T Consensus 340 ~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~ 419 (668)
T 1kv9_A 340 EKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAF 419 (668)
T ss_dssp EESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSC
T ss_pred ccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccccccc
Confidence 211000 000 02445544443332110
Q ss_pred --Cc---------cccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEeccc
Q 046773 356 --EL---------ENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRER 423 (453)
Q Consensus 356 --g~---------~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh 423 (453)
+. ....+..+.-||..||+.+-....... .........++.+..++. +.|++||.++|+.+..++-.
T Consensus 420 ~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 420 NTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp CCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 00 000124788899999998877654332 222233446777777665 99999999999999888644
Q ss_pred CCce--EEEEecCCCE
Q 046773 424 IGEE--VIAFVGDDRH 437 (453)
Q Consensus 424 ~~~~--V~a~s~d~~~ 437 (453)
.+.. -..+..||+.
T Consensus 499 ~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 499 SGIVAAPMTFELAGRQ 514 (668)
T ss_dssp SCCCSCCEEEEETTEE
T ss_pred CCcccCceEEEECCEE
Confidence 3210 1133567763
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.17 E-value=3.8e-05 Score=75.86 Aligned_cols=192 Identities=8% Similarity=-0.021 Sum_probs=109.1
Q ss_pred EEEEeCCCceeeEEEEee--CCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceE-EEEc----
Q 046773 240 LIDFTGCSRYWVGLYAGL--AGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESA-VACT---- 312 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS--~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~-vas~---- 312 (453)
.|+|+|+|+. +++.. .++.++||.+.+++... .+... ....++...+..|++++++.+ ++..
T Consensus 21 ~va~~~~g~~---~v~~~~~~~~~~~l~~~~~g~~~~---~p~~~-----~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 21 NITLTPDGRL---FLSLHQFYQPEMQVAELTQDGLIP---FPPQS-----GNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp EEEECTTSCE---EEEECGGGCCSCSEEEEETTEEEE---SCCCC-----SSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred eEEECCCCCE---EEEeCCCCCCceEEEEECCCCeec---CCCcc-----cCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 4899999985 44543 23337788776665321 00000 011234467889999987744 4432
Q ss_pred --CCcEEEEECCCCceEEEEeecc----CCe--EEEEEEecCCE-EEEEe---CCCccccCcceEEEEEcCCCeeEEEEE
Q 046773 313 --SSRVITFDLRNQGMVLGERGYG----RGL--YVTSVDVNAEA-YIVVE---NRELENQNRRLAIVRRVDTFEEVCRFS 380 (453)
Q Consensus 313 --d~tIrlWDl~t~~~~~~~~g~~----~~~--~v~~~~~~g~~-l~s~s---~dg~~~~~~~~i~Iw~~~tg~~v~~l~ 380 (453)
+..|.+||+.+++.+.+..... +.. .-.++++++.. +++-+ .++ .|.+++.++++....+.
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~-------~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA-------ALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC-------EEEEEETTTCCEEEECT
T ss_pred CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC-------eEEEEECCCCCEEEEec
Confidence 4689999999987555442210 111 12345654444 45544 344 88999998876554432
Q ss_pred ecC-----------------------------CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCC----------eEEE--
Q 046773 381 LRA-----------------------------DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGG----------EYMY-- 418 (453)
Q Consensus 381 ~~~-----------------------------~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG----------~~l~-- 418 (453)
.++ .....++++++++.+..+.. +. +||.+.+. +...
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKI 241 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcce
Confidence 210 12466788888887776655 32 45544321 1000
Q ss_pred EecccCCceE--EEEecCCCEEEEE-eCCcEEEEec
Q 046773 419 SFRERIGEEV--IAFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 419 tL~gh~~~~V--~a~s~d~~~lasg-~D~~IklWDl 451 (453)
...|+.+. . .++.++|+..++. .++.|.+||.
T Consensus 242 ~~~g~~g~-pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 242 ERYSEKPI-CDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEECCS-CSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred EecccCCC-CceEEECCCCCEEEEccCCCeEEEEEC
Confidence 11122222 1 2678999988888 8899999996
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.16 E-value=0.00017 Score=69.34 Aligned_cols=255 Identities=10% Similarity=0.008 Sum_probs=140.2
Q ss_pred EEEEEec-CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcc
Q 046773 147 CRCLTLS-DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVANE 225 (453)
Q Consensus 147 v~~lafs-~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~ 225 (453)
+.++.++ +..|..++.+ |..+|. +|+.+..+..... ......+.+..|..++.++.+..+|.+ |..
T Consensus 62 ~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~--------~~~~~~~~~~~l~v~t~~~~l~~~d~~--g~~ 128 (330)
T 3hxj_A 62 ECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKA--------IVSDFTIFEDILYVTSMDGHLYAINTD--GTE 128 (330)
T ss_dssp EECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-------------CCEEEETTEEEEECTTSEEEEECTT--SCE
T ss_pred ccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCC--------cccCceEECCEEEEEecCCEEEEEcCC--CCE
Confidence 4566665 3455556655 888896 7776554432111 111223336677888888888887765 311
Q ss_pred eEEeee-cceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC
Q 046773 226 TRTAHF-GSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS 304 (453)
Q Consensus 226 ~~~~~~-~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~ 304 (453)
..+... ..+. ..+.++++|+ |+.|+.++.|..+|.+ |+.+. . .......+.++.+++
T Consensus 129 ~~~~~~~~~~~---~~~~~~~~g~----l~vgt~~~~l~~~d~~-g~~~~-------------~-~~~~~~~~~~~~~d~ 186 (330)
T 3hxj_A 129 KWRFKTKKAIY---ATPIVSEDGT----IYVGSNDNYLYAINPD-GTEKW-------------R-FKTNDAITSAASIGK 186 (330)
T ss_dssp EEEEECSSCCC---SCCEECTTSC----EEEECTTSEEEEECTT-SCEEE-------------E-EECSSCCCSCCEECT
T ss_pred EEEEcCCCcee---eeeEEcCCCE----EEEEcCCCEEEEECCC-CCEeE-------------E-EecCCCceeeeEEcC
Confidence 111111 1111 1245666776 4457888999999998 76331 1 111123455566765
Q ss_pred CceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCC-EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC
Q 046773 305 HESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAE-AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA 383 (453)
Q Consensus 305 ~~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~-~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~ 383 (453)
++.+..+. +.|..+| .+++.+....... ..+.++..+++ .+..++.++ .+..++ .+++.+..+....
T Consensus 187 ~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~~g~l~v~t~~~-------gl~~~~-~~g~~~~~~~~~~ 254 (330)
T 3hxj_A 187 DGTIYFGS-DKVYAIN-PDGTEKWNFYAGY--WTVTRPAISEDGTIYVTSLDG-------HLYAIN-PDGTEKWRFKTGK 254 (330)
T ss_dssp TCCEEEES-SSEEEEC-TTSCEEEEECCSS--CCCSCCEECTTSCEEEEETTT-------EEEEEC-TTSCEEEEEECSS
T ss_pred CCEEEEEe-CEEEEEC-CCCcEEEEEccCC--cceeceEECCCCeEEEEcCCC-------eEEEEC-CCCCEeEEeeCCC
Confidence 55554455 8899999 6766554432111 12333333333 455566666 555555 3555555554433
Q ss_pred CCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEec
Q 046773 384 DRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWDF 451 (453)
Q Consensus 384 ~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWDl 451 (453)
.....++... ++.+..++. +.|..+|. +|+.+..+.-.... +. .+.++++..+.+.+|.+++-..
T Consensus 255 ~~~~~~~~~~-~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~-~~~~~~d~~g~l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 255 RIESSPVIGN-TDTIYFGSYDGHLYAINP-DGTEKWNFETGSWI-IATPVIDENGTIYFGTRNGKFYALFN 322 (330)
T ss_dssp CCCSCCEECT-TSCEEEECTTCEEEEECT-TSCEEEEEECSSCC-CSCCEECTTCCEEEECTTSCEEEEEC
T ss_pred CccccceEcC-CCeEEEecCCCCEEEECC-CCcEEEEEEcCCcc-ccceEEcCCCEEEEEcCCCeEEEEec
Confidence 2223333332 445555655 78999996 78877766533333 33 3346777766558899887654
No 237
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.09 E-value=0.00027 Score=71.94 Aligned_cols=182 Identities=12% Similarity=-0.040 Sum_probs=108.5
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce--EEEEcCC--c
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES--AVACTSS--R 315 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~--~vas~d~--t 315 (453)
.|+|+++|+. +++...++.|++||.++++...- +.. ..... +++++++. +++..++ .
T Consensus 135 ~la~d~~g~l---yv~d~~~~~I~~id~~~g~~~~~--------------~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~ 195 (409)
T 3hrp_A 135 GIAAVGNNTV---LAYQRDDPRVRLISVDDNKVTTV--------------HPG-FKGGK-PAVTKDKQRVYSIGWEGTHT 195 (409)
T ss_dssp EEEECSTTEE---EEEETTTTEEEEEETTTTEEEEE--------------EET-CCBCB-CEECTTSSEEEEEBSSTTCE
T ss_pred EEEEeCCCCE---EEEecCCCcEEEEECCCCEEEEe--------------ecc-CCCCc-eeEecCCCcEEEEecCCCce
Confidence 5899999984 45666779999999998873210 011 11122 78887763 4444433 7
Q ss_pred EEEEECCCCceEEEE--e-e-ccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE-----ecCCCe
Q 046773 316 VITFDLRNQGMVLGE--R-G-YGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS-----LRADRN 386 (453)
Q Consensus 316 IrlWDl~t~~~~~~~--~-g-~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~-----~~~~~v 386 (453)
|.++|..++...... . . ......-.++++++..+..+..++ .|..++.+++.. ..+. ......
T Consensus 196 I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~-------~I~~~d~~~~~~-~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNK-------NFGRFNVKTQEV-TLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTC-------EEEEEETTTCCE-EEEEECCCCSCCCCS
T ss_pred EEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCC-------cEEEEECCCCCE-EEEecccccCCCCCC
Confidence 999998876543222 0 1 111112245666444454455555 788888887753 2221 111112
Q ss_pred -e-EEEEeeCCCeEEEEeC--CeEEEEECCCCeEEEEecccC---------------CceEE--EEecCCCEEEEE--eC
Q 046773 387 -V-NVMGCMNQGYALMCVE--GVIRVWEVEGGEYMYSFRERI---------------GEEVI--AFVGDDRHVAAS--CG 443 (453)
Q Consensus 387 -~-~~~~~~~~~~lls~s~--~tIrlWD~~tG~~l~tL~gh~---------------~~~V~--a~s~d~~~lasg--~D 443 (453)
. .++++++++.+..+.. +.|+.||... + +.++.|+. .. .. ++.|||++.++- .+
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~-P~gia~d~dG~lyvad~~~~ 344 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQ-PNGMTVDEDGNFYIVDGFKG 344 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSS-EEEEEECTTCCEEEEETTTT
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCC-CeEEEEeCCCCEEEEeCCCC
Confidence 2 7888887677665544 8999999764 3 44454442 22 33 678999866654 46
Q ss_pred CcEEEEec
Q 046773 444 TNIHLWDF 451 (453)
Q Consensus 444 ~~IklWDl 451 (453)
+.|+.||+
T Consensus 345 ~~I~~~~~ 352 (409)
T 3hrp_A 345 YCLRKLDI 352 (409)
T ss_dssp CEEEEEET
T ss_pred CEEEEEEC
Confidence 78999984
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.08 E-value=0.00011 Score=70.65 Aligned_cols=252 Identities=8% Similarity=-0.026 Sum_probs=134.6
Q ss_pred EEec-CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc-CCeEEEEeCCCCEEEEEeecCCcceE
Q 046773 150 LTLS-DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT-DSQLIFATLDGDIHVAVIDDVANETR 227 (453)
Q Consensus 150 lafs-~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~-g~~LasgS~D~tIkvWd~~~~g~~~~ 227 (453)
..++ +..|..|+.++.|..|| .+|+.+..+..+. ..+.++.++ +..|..++.+ +..+|.+..-...+
T Consensus 25 ~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~--------~~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~ 93 (330)
T 3hxj_A 25 PILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGE--------IIECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRF 93 (330)
T ss_dssp CEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGG--------EEEECCEETTTTEECCSSCE--EEEECCCGGGGGGS
T ss_pred ceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCC--------CcccceEEecCCcEEEecCc--EEEECCCCcEEEEE
Confidence 4443 34666778899999999 9999876654211 134556665 4455555555 77777532001111
Q ss_pred EeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc-
Q 046773 228 TAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE- 306 (453)
Q Consensus 228 ~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~- 306 (453)
... ..... ...+. +++ |+.|+.++.|..+|.+ |+... . .......+.++.+++++
T Consensus 94 ~~~-~~~~~---~~~~~-~~~----l~v~t~~~~l~~~d~~-g~~~~-------------~-~~~~~~~~~~~~~~~~g~ 149 (330)
T 3hxj_A 94 DTK-KAIVS---DFTIF-EDI----LYVTSMDGHLYAINTD-GTEKW-------------R-FKTKKAIYATPIVSEDGT 149 (330)
T ss_dssp CC------C---CEEEE-TTE----EEEECTTSEEEEECTT-SCEEE-------------E-EECSSCCCSCCEECTTSC
T ss_pred ECC-CCccc---CceEE-CCE----EEEEecCCEEEEEcCC-CCEEE-------------E-EcCCCceeeeeEEcCCCE
Confidence 111 11110 12222 444 5567889999999998 76321 1 01112234455666444
Q ss_pred eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCe
Q 046773 307 SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRN 386 (453)
Q Consensus 307 ~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v 386 (453)
+.+++.++.|..+|.+ ++.+..............++.++. +..++ + .+..++ .+++.+..+......+
T Consensus 150 l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~-------~l~~~d-~~g~~~~~~~~~~~~~ 217 (330)
T 3hxj_A 150 IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS--D-------KVYAIN-PDGTEKWNFYAGYWTV 217 (330)
T ss_dssp EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--S-------SEEEEC-TTSCEEEEECCSSCCC
T ss_pred EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--C-------EEEEEC-CCCcEEEEEccCCcce
Confidence 4555556889999999 665444322211111122333444 44444 5 566777 6776665555444445
Q ss_pred eEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecccCCceEE--EEecCCCEEEEEeCCcEEEEe
Q 046773 387 VNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRERIGEEVI--AFVGDDRHVAASCGTNIHLWD 450 (453)
Q Consensus 387 ~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~gh~~~~V~--a~s~d~~~lasg~D~~IklWD 450 (453)
.+++...++...+.+.++.|..+|. +|+.+..+...... +. .+.++++..++..++.|..+|
T Consensus 218 ~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~-~~~~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 218 TRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRI-ESSPVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp SCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCC-CSCCEECTTSCEEEECTTCEEEEEC
T ss_pred eceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCc-cccceEcCCCeEEEecCCCCEEEEC
Confidence 5666655554444333466777774 67776665433222 22 333456555444666777666
No 239
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.07 E-value=0.0032 Score=66.96 Aligned_cols=112 Identities=10% Similarity=0.103 Sum_probs=64.7
Q ss_pred cCCEEEEEeC-CCcEEEEEC-CCCeEEEEecCCCCC-ccc-ccc-ceEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceE
Q 046773 153 SDLYLACGFA-DGAVRLFDL-TTRLHVRTFRPQHSD-RLG-QFS-RAVSGIIITDSQLIFATLDGDIHVAVIDDVANETR 227 (453)
Q Consensus 153 s~~~LaSGS~-D~TIrlWD~-~tg~~~~tl~gh~~~-~~~-~~s-~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~ 227 (453)
.+..|..++. ++.|.-.|+ +||+.+.++...... ... .+. ..-+++++++.+|+.++.|+.+...|..+ |...-
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~t-G~~~W 139 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKT-GKINW 139 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTT-CCEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCC-CCEEE
Confidence 3555666666 899999999 999999887532110 000 000 00123456788888899999998888877 51111
Q ss_pred Eeeec------ceecCceEEEEeCCCceeeEEEEeeC------CCeEEEeeCCCCcEE
Q 046773 228 TAHFG------SVMDDGVLIDFTGCSRYWVGLYAGLA------GRAFHIWDRQAEEVF 273 (453)
Q Consensus 228 ~~~~~------~v~~~~~~v~Fs~dg~~~~~LaSgS~------D~tIrvWD~~tg~~~ 273 (453)
+.... .+.... .| . +++ ++.++. |+.|..+|.+||+.+
T Consensus 140 ~~~~~~~~~~~~~~~~P-~v--~-~g~----v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAP-FV--A-KDT----VLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EEECCCGGGTCBCCSCC-EE--E-TTE----EEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred EecCCCCCccceeccCC-EE--E-CCE----EEEEecCCccCCCCEEEEEECCCCcEE
Confidence 11111 111000 11 1 333 344443 789999999999943
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.07 E-value=0.00084 Score=71.54 Aligned_cols=77 Identities=8% Similarity=0.032 Sum_probs=49.5
Q ss_pred ceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCce--EEEEecCCCEEE
Q 046773 363 RLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEE--VIAFVGDDRHVA 439 (453)
Q Consensus 363 ~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~--V~a~s~d~~~la 439 (453)
..+..+|..+|+.+-++..... +.+......++.+..++. +.|+.+|.+||+.+.+++-..... -..+.+||+.++
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKFA-AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSC-CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEecCCCC-ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 4788899999988777654321 222222334566666665 999999999999998886332110 113457887655
Q ss_pred E
Q 046773 440 A 440 (453)
Q Consensus 440 s 440 (453)
.
T Consensus 523 ~ 523 (571)
T 2ad6_A 523 G 523 (571)
T ss_dssp E
T ss_pred E
Confidence 4
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.04 E-value=0.0014 Score=62.95 Aligned_cols=172 Identities=10% Similarity=0.022 Sum_probs=107.7
Q ss_pred EEEeCCCceeeEEEEeeCC--CeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc-CCcEE
Q 046773 241 IDFTGCSRYWVGLYAGLAG--RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT-SSRVI 317 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D--~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~-d~tIr 317 (453)
+.|+ +++. ..|.+.+ .+|++.|++||+.+.-.. +... -+--.+.+.++.+.++.. ++.+.
T Consensus 48 L~~~-~~~L---yestG~~g~S~v~~vD~~Tgkv~~~~~------------l~~~-~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 48 FFYR-NGYF---YESTGLNGRSSIRKVDIESGKTLQQIE------------LGKR-YFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEE-TTEE---EEEEEETTEEEEEEECTTTCCEEEEEE------------CCTT-CCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEE-CCEE---EEECCCCCCceEEEEECCCCcEEEEEe------------cCCc-cceeEEEEeCCEEEEEEeeCCEEE
Confidence 6787 5553 3455554 489999999999542111 1110 111236667777777765 47899
Q ss_pred EEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCC-----CeeEEEEe
Q 046773 318 TFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRAD-----RNVNVMGC 392 (453)
Q Consensus 318 lWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~-----~v~~~~~~ 392 (453)
++|++|.+.+.+......+ ..++++++.++....+. .+.+.|..|.+.+.++....+ .+..+.+
T Consensus 111 v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~-------~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~- 179 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTP-------VLRFLDPESLTPVRTITVTAHGEELPELNELEW- 179 (262)
T ss_dssp EEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSS-------EEEEECTTTCSEEEEEECEETTEECCCEEEEEE-
T ss_pred EEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCC-------eEEEEcCCCCeEEEEEEeccCCccccccceeEE-
Confidence 9999998877665321221 35667888777655455 788889999888777655321 1122332
Q ss_pred eCCCeEEEEe-C-CeEEEEECCCCeEEEEeccc-----------CCceEE--EEecCCCEE-EEE
Q 046773 393 MNQGYALMCV-E-GVIRVWEVEGGEYMYSFRER-----------IGEEVI--AFVGDDRHV-AAS 441 (453)
Q Consensus 393 ~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh-----------~~~~V~--a~s~d~~~l-asg 441 (453)
.++ ++.+.. . ++|.+-|.+||+.+.++.-. .+...+ |+.|++++| ++|
T Consensus 180 ~~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 180 VDG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ETT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ECC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 354 444443 3 89999999999998877421 122134 778887754 778
No 242
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.93 E-value=0.0015 Score=67.42 Aligned_cols=162 Identities=9% Similarity=0.060 Sum_probs=90.6
Q ss_pred CeEEEeeCCCCcEEecccccCCcceeeeeeeeeec-cceeEEEEcCCc-eEEEEc--------------------CCcEE
Q 046773 260 RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFT-EFVGRVRVTSHE-SAVACT--------------------SSRVI 317 (453)
Q Consensus 260 ~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~-~~v~~v~~s~~~-~~vas~--------------------d~tIr 317 (453)
+.|-+.|.+|++...- |. ..... ..-..+.++|+. .+++|. +++|.
T Consensus 164 g~v~vlD~~T~~v~~~-----------~~-~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~ 231 (462)
T 2ece_A 164 GGILMLDHYSFEPLGK-----------WE-IDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIH 231 (462)
T ss_dssp CEEEEECTTTCCEEEE-----------CC-SBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEE
T ss_pred CeEEEEECCCCeEEEE-----------Ec-cCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEE
Confidence 7899999999884321 10 00011 112235667665 444443 57899
Q ss_pred EEECCCCceEEEE-eeccCCeEEE----EEEecCCEEEEEe------CCCccccCcceEEEEEcCCCe--eEEEEEec--
Q 046773 318 TFDLRNQGMVLGE-RGYGRGLYVT----SVDVNAEAYIVVE------NRELENQNRRLAIVRRVDTFE--EVCRFSLR-- 382 (453)
Q Consensus 318 lWDl~t~~~~~~~-~g~~~~~~v~----~~~~~g~~l~s~s------~dg~~~~~~~~i~Iw~~~tg~--~v~~l~~~-- 382 (453)
+||+.+++.+.+. .+.. +.... .+++++....+++ .++ ++.+|..+.++ .++.+...
T Consensus 232 v~D~~~~k~~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss-------~V~v~~~d~g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 232 FWDLRKRKRIHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKDLSS-------SIWLWFYEDGKWNAEKVIEIPAE 303 (462)
T ss_dssp EEETTTTEEEEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTTCCE-------EEEEEEEETTEEEEEEEEEECCE
T ss_pred EEECCCCcEeeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccCCCc-------eEEEEEecCCceeEEEEEeCCCc
Confidence 9999987655444 2211 11112 2366777655544 344 66666555442 12221111
Q ss_pred ----------------CCCeeEEEEeeCCCeEEEEeC--CeEEEEECCC---CeEEEEec-c-c---------C----Cc
Q 046773 383 ----------------ADRNVNVMGCMNQGYALMCVE--GVIRVWEVEG---GEYMYSFR-E-R---------I----GE 426 (453)
Q Consensus 383 ----------------~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~t---G~~l~tL~-g-h---------~----~~ 426 (453)
+.....+..++|+++|..+.- ++|.++|+.. .+.+..+. | . . +.
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP 383 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP 383 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC
T ss_pred cccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC
Confidence 123456778899999876654 9999999863 35555543 2 1 0 12
Q ss_pred eEEEEecCCCEEEEE
Q 046773 427 EVIAFVGDDRHVAAS 441 (453)
Q Consensus 427 ~V~a~s~d~~~lasg 441 (453)
.-.+++|||++|..+
T Consensus 384 r~~~lSpDGk~LyVa 398 (462)
T 2ece_A 384 QMLEISRDGRRVYVT 398 (462)
T ss_dssp CCEEECTTSSEEEEE
T ss_pred CEEEEcCCCCEEEEE
Confidence 123789999988765
No 243
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.90 E-value=0.019 Score=61.23 Aligned_cols=217 Identities=12% Similarity=0.073 Sum_probs=111.8
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccc-eEEEEEEcCCeEEEEeCCCCEEEEEeecCCcceEEeeec
Q 046773 154 DLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSR-AVSGIIITDSQLIFATLDGDIHVAVIDDVANETRTAHFG 232 (453)
Q Consensus 154 ~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~-~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~ 232 (453)
+..|..++.++.|.-.|++||+.+.++.........+... .-+++++.+.+|+.++.|+.+.-.|..+ |...-+....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~T-G~~~W~~~~~ 146 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNT-GKVVWKKKFA 146 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSS-CCEEEEEECS
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCC-CCEEeeecCC
Confidence 4444445553349999999999998876432110000000 0123455678888899999988888877 6221111111
Q ss_pred c-----eecCceEEEEeC--CCceeeEEEEee------CCCeEEEeeCCCCcEEecccccC---------------Ccce
Q 046773 233 S-----VMDDGVLIDFTG--CSRYWVGLYAGL------AGRAFHIWDRQAEEVFVGGDLTD---------------HNTV 284 (453)
Q Consensus 233 ~-----v~~~~~~v~Fs~--dg~~~~~LaSgS------~D~tIrvWD~~tg~~~~g~~l~~---------------~~~v 284 (453)
. -....-.| +.. +|+. .|+.++ .++.|.-+|.+||+.+--....+ ....
T Consensus 147 ~~~~~~~~~~sP~v-~~~~~~G~~--~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 147 DHGAGYTMTGAPTI-VKDGKTGKV--LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp CGGGTCBCCSCCEE-EECTTTCCE--EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred CCCcCcccccCCEE-eCCCcCCcE--EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 0 00001012 211 2332 244544 37899999999999432100000 0000
Q ss_pred eeeee-------------eeeeccceeEEEEcCC--ceEEEEc--------------------C----CcEEEEECCCCc
Q 046773 285 MGWRM-------------LTEFTEFVGRVRVTSH--ESAVACT--------------------S----SRVITFDLRNQG 325 (453)
Q Consensus 285 ~~w~~-------------l~~h~~~v~~v~~s~~--~~~vas~--------------------d----~tIrlWDl~t~~ 325 (453)
..|.. .-+...+ ...+++++ .+++++. | ++|..+|++||+
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w-~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~ 302 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPW-QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGE 302 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCC-SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCC
T ss_pred ccCCCccccccccccccccCCcccc-CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCC
Confidence 00000 0011111 23455543 2344442 2 479999999998
Q ss_pred eEEEEe--ecc------CCeEEE-EEE-ecCC---EEEEEeCCCccccCcceEEEEEcCCCeeEEEEEec
Q 046773 326 MVLGER--GYG------RGLYVT-SVD-VNAE---AYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLR 382 (453)
Q Consensus 326 ~~~~~~--g~~------~~~~v~-~~~-~~g~---~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~ 382 (453)
.+-... .|. ....+. ... .+|+ .++.++.+| .+.+.|.+||+.+..+...
T Consensus 303 ~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G-------~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 303 VKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNG-------FFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp EEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTS-------EEEEEETTTCCEEEEEESS
T ss_pred EEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCc-------eEEEEECCCCCEecccccc
Confidence 765542 121 011111 121 3564 566778888 9999999999988776554
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.89 E-value=0.0061 Score=57.84 Aligned_cols=172 Identities=10% Similarity=0.044 Sum_probs=106.0
Q ss_pred EEEeCCCceeeEEEEeeCC--CeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc-CCcEE
Q 046773 241 IDFTGCSRYWVGLYAGLAG--RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT-SSRVI 317 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D--~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~-d~tIr 317 (453)
+.|++ ++. ..|.+.+ .+|++.|++||+.+.-..+ ..+ -.--.+.+.++.+..... ++.+.
T Consensus 26 L~~~~-~~L---yestG~~g~S~v~~vD~~tgkv~~~~~l------------~~~-~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 26 LFYLR-GHL---YESTGETGRSSVRKVDLETGRILQRAEV------------PPP-YFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEET-TEE---EEEECCTTSCEEEEEETTTCCEEEEEEC------------CTT-CCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEC-CEE---EEECCCCCCceEEEEECCCCCEEEEEeC------------CCC-cceeEEEEeCCEEEEEEeeCCEEE
Confidence 56776 342 2343433 5999999999995431111 111 011235566677777665 47899
Q ss_pred EEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCC-----eeEEEEe
Q 046773 318 TFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADR-----NVNVMGC 392 (453)
Q Consensus 318 lWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~-----v~~~~~~ 392 (453)
++|++|.+.+.+......+ ..+.+++..++....+. .+.+.|..|.+.+.++....+. +..+. +
T Consensus 89 v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~-------~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~ 157 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTA-------VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-W 157 (243)
T ss_dssp EEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSS-------EEEEECTTTCCEEEEEECEETTEECCCEEEEE-E
T ss_pred EEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCC-------eEEEEeCCCCeEEEEEEEccCCcccccceeeE-E
Confidence 9999998877665322222 46667888777665555 8889999998888777553221 11222 2
Q ss_pred eCCCeEEEEe-C-CeEEEEECCCCeEEEEeccc------------CCceEE--EEecCCCE-EEEE
Q 046773 393 MNQGYALMCV-E-GVIRVWEVEGGEYMYSFRER------------IGEEVI--AFVGDDRH-VAAS 441 (453)
Q Consensus 393 ~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh------------~~~~V~--a~s~d~~~-lasg 441 (453)
.++ ++.+.. . ..|.+-|.+||+.+.++.-. .+...+ |+.|++++ +++|
T Consensus 158 ~~G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 158 VNG-ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ETT-EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred eCC-EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 344 444333 3 89999999999998876411 222245 67787665 5888
No 245
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.86 E-value=0.0018 Score=66.64 Aligned_cols=234 Identities=12% Similarity=0.130 Sum_probs=121.6
Q ss_pred CCCcEEEEECCCCeEEEEecCC--CCC--ccccccceEEEEEEcCCeEEEEeC--CCCEEEEEeecCC--cceEEeeecc
Q 046773 162 ADGAVRLFDLTTRLHVRTFRPQ--HSD--RLGQFSRAVSGIIITDSQLIFATL--DGDIHVAVIDDVA--NETRTAHFGS 233 (453)
Q Consensus 162 ~D~TIrlWD~~tg~~~~tl~gh--~~~--~~~~~s~~V~~i~f~g~~LasgS~--D~tIkvWd~~~~g--~~~~~~~~~~ 233 (453)
.+++|-++|+.|++.++++.-. ... ...|+ .+ .+..||++|+.+.. +++|-|-|+.+ + +.++.. +.
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~--~~-~~spDGk~lyV~n~~~~~~VsVID~~t-~kvv~~I~v--~g 220 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW--MN-ALTPDNKNLLFYQFSPAPAVGVVDLEG-KTFDRMLDV--PD 220 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG--GS-EECTTSSEEEEEECSSSCEEEEEETTT-TEEEEEEEC--CS
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcc--eE-EEcCCCCEEEEEecCCCCeEEEEECCC-CeEEEEEEc--CC
Confidence 4789999999999998887411 000 00111 11 14456778877664 57788888776 3 111111 10
Q ss_pred eecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccce-eEEEEcCC--ceEEE
Q 046773 234 VMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFV-GRVRVTSH--ESAVA 310 (453)
Q Consensus 234 v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v-~~v~~s~~--~~~va 310 (453)
. ....|+|+. .+++-+.|+++-+-|..+++...-.+ ..+.--..++ ..+.|+++ .++..
T Consensus 221 -----~-~~~~p~g~~--~~v~~~~dG~~~~V~~~~~~v~~~~~----------~~~~v~~~p~~~~~~~~~dg~~~~~~ 282 (426)
T 3c75_H 221 -----C-YHIFPASPT--VFYMNCRDGSLARVDFADGETKVTNT----------EVFHTEDELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp -----E-EEEEEEETT--EEEEEETTSSEEEEECCTTCCEEEEC----------CCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred -----c-eeeccCCCc--EEEEEcCCCCEEEEECCCCcEEEEee----------eeeccCCCceeeEeeecCCCCEEEEE
Confidence 0 111222221 12233344444444443333110000 0000000010 01233433 34444
Q ss_pred EcCCcEEEEECCCCceEEE--Ee---------e-ccCCeEEEEEEecCCEEEEEeCCCcc-c--cCcceEEEEEcCCCee
Q 046773 311 CTSSRVITFDLRNQGMVLG--ER---------G-YGRGLYVTSVDVNAEAYIVVENRELE-N--QNRRLAIVRRVDTFEE 375 (453)
Q Consensus 311 s~d~tIrlWDl~t~~~~~~--~~---------g-~~~~~~v~~~~~~g~~l~s~s~dg~~-~--~~~~~i~Iw~~~tg~~ 375 (453)
+..++|.+.|+.++..... .. + ........+++++++++.++...+.+ . +..+++.|.|..+.+.
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE
Confidence 4556788888765432110 00 0 00011124788998877665421100 0 1123788999999998
Q ss_pred EEEEEecCCCeeEEEEeeCCC-eEEEEe-C-CeEEEEECCCCeEEEEe
Q 046773 376 VCRFSLRADRNVNVMGCMNQG-YALMCV-E-GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 376 v~~l~~~~~~v~~~~~~~~~~-~lls~s-~-~tIrlWD~~tG~~l~tL 420 (453)
+.++.... ....+.++++++ +++++. . ++|.+.|++|++.+.++
T Consensus 363 v~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 363 INKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 88876432 245788999998 777666 3 99999999999999887
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.84 E-value=0.0031 Score=60.66 Aligned_cols=171 Identities=8% Similarity=-0.014 Sum_probs=108.6
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCceEEEEc-CCcEEEE
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHESAVACT-SSRVITF 319 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~~vas~-d~tIrlW 319 (453)
|.|+. ++. ..|.+.++.|++.|++||+.+.-. +.. .-+--.+.+.++.+.++.. ++.+.++
T Consensus 60 L~~~~-~~L---y~stG~~g~v~~iD~~Tgkv~~~~-------------l~~-~~FgeGit~~g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 60 LVFHQ-GHF---FESTGHQGTLRQLSLESAQPVWME-------------RLG-NIFAEGLASDGERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEET-TEE---EEEETTTTEEEECCSSCSSCSEEE-------------ECT-TCCEEEEEECSSCEEEEESSSCEEEEE
T ss_pred EEEEC-CEE---EEEcCCCCEEEEEECCCCcEEeEE-------------CCC-CcceeEEEEeCCEEEEEEccCCEEEEE
Confidence 66764 332 456667788999999999843100 111 0111236777778877765 4789999
Q ss_pred ECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCC-----eeEEEEeeC
Q 046773 320 DLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADR-----NVNVMGCMN 394 (453)
Q Consensus 320 Dl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~-----v~~~~~~~~ 394 (453)
|++|.+.+.+......+ ..+++++..|+....++ .+.+.|..|.+.+.++....+. +..+. +.+
T Consensus 122 D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSdGs~-------~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe-~~d 190 (268)
T 3nok_A 122 SGMPPQRERTTRYSGEG---WGLCYWNGKLVRSDGGT-------MLTFHEPDGFALVGAVQVKLRGQPVELINELE-CAN 190 (268)
T ss_dssp ETTTTEEEEEEECSSCC---CCEEEETTEEEEECSSS-------EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EET
T ss_pred ECCcCcEEEEEeCCCce---eEEecCCCEEEEECCCC-------EEEEEcCCCCeEEEEEEeCCCCcccccccccE-EeC
Confidence 99998877665322221 45668888887766566 8889999999888776543211 12222 235
Q ss_pred CCeEEEEe-C-CeEEEEECCCCeEEEEeccc------------CCceEE--EEecCCC-EEEEE
Q 046773 395 QGYALMCV-E-GVIRVWEVEGGEYMYSFRER------------IGEEVI--AFVGDDR-HVAAS 441 (453)
Q Consensus 395 ~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh------------~~~~V~--a~s~d~~-~lasg 441 (453)
+ ++.+.. . ++|.+=|.+||+.+.++.-. .+...+ |+.|+++ .+++|
T Consensus 191 G-~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 191 G-VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp T-EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred C-EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5 444443 3 89999999999998877421 122245 6667654 56888
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.82 E-value=0.00036 Score=70.42 Aligned_cols=236 Identities=11% Similarity=0.072 Sum_probs=123.7
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCCcc--ccccceEEEEEEcCCeEEEEeC--CCCEEE--EEeecCCcceEEeeeccee
Q 046773 162 ADGAVRLFDLTTRLHVRTFRPQHSDRL--GQFSRAVSGIIITDSQLIFATL--DGDIHV--AVIDDVANETRTAHFGSVM 235 (453)
Q Consensus 162 ~D~TIrlWD~~tg~~~~tl~gh~~~~~--~~~s~~V~~i~f~g~~LasgS~--D~tIkv--Wd~~~~g~~~~~~~~~~v~ 235 (453)
.|++|.+||+.|++.++++.-+....+ +..... -++..||+.|+.+.. +.++.| +|..+ ...+.. +.
T Consensus 94 ~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~-ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v--~~-- 166 (368)
T 1mda_H 94 RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI-IGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKS--AS-- 166 (368)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTS-EEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEEC--SS--
T ss_pred CCCEEEEEECCCCCEEEEEECCCccccccCCCcce-EEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEEC--CC--
Confidence 478999999999999999853200000 000001 124446777777764 356777 77654 111111 00
Q ss_pred cCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCC-----CcEEecccccCCcceeeeeeeeeeccceeEEEEc-CCceEE
Q 046773 236 DDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQA-----EEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT-SHESAV 309 (453)
Q Consensus 236 ~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~t-----g~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s-~~~~~v 309 (453)
. +.+.|+|+. .+++.+.|+++-+-|+++ ++...-.+ . . +. .+ ..+. .+. ++.++.
T Consensus 167 --~--~~~~p~g~~--~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t---~-~---i~--vg-~~P~---~~~~~~~~~~ 227 (368)
T 1mda_H 167 --C--FHIHPGAAA--THYLGSCPASLAASDLAAAPAAAGIVGAQCT---G-A---QN--CS-SQAA---QANYPGMLVW 227 (368)
T ss_dssp --C--CCCEEEETT--EEECCCCTTSCEEEECCSSCCCCEECCCCSC---T-T---SC--BC-SCCE---EETTTTEEEE
T ss_pred --c--eEEccCCCe--EEEEEcCCCCEEEEECccccccCCeEEEEee---e-e---ee--CC-CCcc---ccccCCEEEE
Confidence 0 122344443 133455677766667766 33110000 0 0 00 00 1222 122 222344
Q ss_pred EEcCCcEEEEECCCCce--EEEEe---------e-ccCCeEEEEEEecCCEEEEEeC-C-CccccCcceEEEEEcCCCee
Q 046773 310 ACTSSRVITFDLRNQGM--VLGER---------G-YGRGLYVTSVDVNAEAYIVVEN-R-ELENQNRRLAIVRRVDTFEE 375 (453)
Q Consensus 310 as~d~tIrlWDl~t~~~--~~~~~---------g-~~~~~~v~~~~~~g~~l~s~s~-d-g~~~~~~~~i~Iw~~~tg~~ 375 (453)
.+. ++|.+-|+.++.. +.+.. + ........+|+++++++..+.. . +.....+....|+|+.+.+.
T Consensus 228 vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v 306 (368)
T 1mda_H 228 AVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT 306 (368)
T ss_dssp CBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE
T ss_pred EcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE
Confidence 444 6777777764321 11100 0 0001111468999888766432 1 10000000445999999988
Q ss_pred EEEEEecCCCeeEEEEeeCCCeE-EEEe-C-CeEEEEECCCCeEEEEecccCC
Q 046773 376 VCRFSLRADRNVNVMGCMNQGYA-LMCV-E-GVIRVWEVEGGEYMYSFRERIG 425 (453)
Q Consensus 376 v~~l~~~~~~v~~~~~~~~~~~l-ls~s-~-~tIrlWD~~tG~~l~tL~gh~~ 425 (453)
+..+.... ....+.++++++++ ++.. . ++|.++|++|++.+.+++....
T Consensus 307 v~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~ 358 (368)
T 1mda_H 307 SGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358 (368)
T ss_dssp EECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred EEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC
Confidence 87775543 35678889998854 4555 4 9999999999999999975443
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.74 E-value=0.028 Score=60.17 Aligned_cols=112 Identities=10% Similarity=0.117 Sum_probs=63.2
Q ss_pred CCEEEEEeC-CCcEEEEEC-CCCeEEEEecCCCCCcccc--cc-ceEEEEEE--cCCe----EEEEeCCCCEEEEEeecC
Q 046773 154 DLYLACGFA-DGAVRLFDL-TTRLHVRTFRPQHSDRLGQ--FS-RAVSGIII--TDSQ----LIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 154 ~~~LaSGS~-D~TIrlWD~-~tg~~~~tl~gh~~~~~~~--~s-~~V~~i~f--~g~~----LasgS~D~tIkvWd~~~~ 222 (453)
+..|..++. ++.|.-.|+ +||+.+.++.........+ +. ...+++++ .+.+ |+.++.|+.+.-.|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T- 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET- 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT-
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC-
Confidence 556666666 899999999 9999998876322110000 00 00123455 5555 88889999888888777
Q ss_pred CcceEEeeecc-----eecCceEEEEeCCCceeeEEEEee------CCCeEEEeeCCCCcEE
Q 046773 223 ANETRTAHFGS-----VMDDGVLIDFTGCSRYWVGLYAGL------AGRAFHIWDRQAEEVF 273 (453)
Q Consensus 223 g~~~~~~~~~~-----v~~~~~~v~Fs~dg~~~~~LaSgS------~D~tIrvWD~~tg~~~ 273 (453)
|...-+..... .....-.| . +++ ++.++ .++.|+-+|.+||+++
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v--~-~g~----V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYV--V-KDK----VIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE--E-TTE----EEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCEEEeecCCCCCccceeecCCEE--E-CCE----EEEEecccccCCCCeEEEEECCCCcEE
Confidence 62211111110 00000011 1 333 33444 3789999999999943
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.69 E-value=0.028 Score=53.98 Aligned_cols=192 Identities=9% Similarity=-0.039 Sum_probs=110.4
Q ss_pred EEEEEecC-CE-EEEEe--CCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecC
Q 046773 147 CRCLTLSD-LY-LACGF--ADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDV 222 (453)
Q Consensus 147 v~~lafs~-~~-LaSGS--~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~ 222 (453)
...|+|++ .. .+|.+ .+++|++.|+.||+.++++.-... . ...+++++++.|..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~------fgeGi~~~g~~lyv--------------- 80 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-Y------FGEGLTLLNEKLYQ--------------- 80 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-C------CEEEEEEETTEEEE---------------
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-c------ceEEEEEeCCEEEE---------------
Confidence 46788987 43 33333 268999999999999888642111 0 11223333332211
Q ss_pred CcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEE
Q 046773 223 ANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRV 302 (453)
Q Consensus 223 g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~ 302 (453)
+.-.+++|-++|.+|.+.+.- ++ .+ ...-..+..
T Consensus 81 --------------------------------~t~~~~~v~viD~~t~~v~~~--i~-----------~g-~~~g~glt~ 114 (266)
T 2iwa_A 81 --------------------------------VVWLKNIGFIYDRRTLSNIKN--FT-----------HQ-MKDGWGLAT 114 (266)
T ss_dssp --------------------------------EETTCSEEEEEETTTTEEEEE--EE-----------CC-SSSCCEEEE
T ss_pred --------------------------------EEecCCEEEEEECCCCcEEEE--EE-----------CC-CCCeEEEEE
Confidence 122456778888888773310 00 00 000112445
Q ss_pred cCCceEEEEcCCcEEEEECCCCceEEEE-eecc-CCe-EEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEEE
Q 046773 303 TSHESAVACTSSRVITFDLRNQGMVLGE-RGYG-RGL-YVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVCR 378 (453)
Q Consensus 303 s~~~~~vas~d~tIrlWDl~t~~~~~~~-~g~~-~~~-~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~~ 378 (453)
+++.++++..+++|.+.|.++.+.+.+. .+.. ... ..+.+.+.+..+.... .++ +|.+-|..+++.+..
T Consensus 115 Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~-------~V~vID~~tg~V~~~ 187 (266)
T 2iwa_A 115 DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTD-------CIARISAKDGTLLGW 187 (266)
T ss_dssp CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSS-------EEEEEETTTCCEEEE
T ss_pred CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCC-------eEEEEECCCCcEEEE
Confidence 5555666655678999999998766553 2211 100 1234443334444333 345 889999999998888
Q ss_pred EEecC-------------CCeeEEEEeeCCCeEEEEeC--CeEEEEECCC
Q 046773 379 FSLRA-------------DRNVNVMGCMNQGYALMCVE--GVIRVWEVEG 413 (453)
Q Consensus 379 l~~~~-------------~~v~~~~~~~~~~~lls~s~--~tIrlWD~~t 413 (453)
+.+.+ +....++++++++++..+.. .+|.+=|+.+
T Consensus 188 I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 188 ILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 87641 23467888888887765554 7776666654
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.61 E-value=0.03 Score=53.67 Aligned_cols=182 Identities=7% Similarity=-0.042 Sum_probs=103.2
Q ss_pred eEEEEEEecCC-EEEEEeCCC--cEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeec
Q 046773 145 LTCRCLTLSDL-YLACGFADG--AVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDD 221 (453)
Q Consensus 145 v~v~~lafs~~-~LaSGS~D~--TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~ 221 (453)
-+...|.|++. +.+|.+.++ +|++.|++||+.++++.-.. ..| -.++++++++|..
T Consensus 43 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~F------geGit~~g~~ly~-------------- 101 (262)
T 3nol_A 43 AFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYF------GEGISDWKDKIVG-------------- 101 (262)
T ss_dssp CEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCC------EEEEEEETTEEEE--------------
T ss_pred cccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccc------eeEEEEeCCEEEE--------------
Confidence 44677899864 556666655 99999999999988875321 111 1234444332221
Q ss_pred CCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 222 VANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 222 ~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
..-.++.+-++|.+|.+.+.--.. .+ .+ ..++
T Consensus 102 ---------------------------------ltw~~~~v~v~D~~t~~~~~ti~~------------~~-eG--~glt 133 (262)
T 3nol_A 102 ---------------------------------LTWKNGLGFVWNIRNLRQVRSFNY------------DG-EG--WGLT 133 (262)
T ss_dssp ---------------------------------EESSSSEEEEEETTTCCEEEEEEC------------SS-CC--CCEE
T ss_pred ---------------------------------EEeeCCEEEEEECccCcEEEEEEC------------CC-Cc--eEEe
Confidence 112356777888888773310000 00 01 1234
Q ss_pred EcCCceEEEEcCCcEEEEECCCCceEEEE-ee-ccCC-eEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEE
Q 046773 302 VTSHESAVACTSSRVITFDLRNQGMVLGE-RG-YGRG-LYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVC 377 (453)
Q Consensus 302 ~s~~~~~vas~d~tIrlWDl~t~~~~~~~-~g-~~~~-~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~ 377 (453)
.+++.++++..+++|.+.|.+|.+.+.+. .+ .+.. ...+.+.+.+..+.... .+. +|.+-|..+|+.+.
T Consensus 134 ~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~-------~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 134 HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTN-------KIVRIDPETGKVTG 206 (262)
T ss_dssp ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSS-------EEEEECTTTCBEEE
T ss_pred cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCC-------eEEEEECCCCcEEE
Confidence 44544555544567999999988766553 21 1111 11233444444444443 344 88889999999888
Q ss_pred EEEecC------------CCeeEEEEeeCCCeEEEEe
Q 046773 378 RFSLRA------------DRNVNVMGCMNQGYALMCV 402 (453)
Q Consensus 378 ~l~~~~------------~~v~~~~~~~~~~~lls~s 402 (453)
.+.+.+ +-...++++++.+.+..++
T Consensus 207 ~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 207 IIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 887641 2245678888777666544
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.60 E-value=0.011 Score=62.91 Aligned_cols=76 Identities=9% Similarity=0.052 Sum_probs=48.4
Q ss_pred ceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCce--EEEEecCCCEEE
Q 046773 363 RLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEE--VIAFVGDDRHVA 439 (453)
Q Consensus 363 ~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~--V~a~s~d~~~la 439 (453)
..+.-||..||+.+-....... .........++.+..++. +.++.+|.+||+.+..++...+.. -..+..||+..+
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLP-LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSC-CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ceEEEEECCCCCEEEEecCCCC-CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 4788899999988766654321 111111224566666655 999999999999998886543320 113457887443
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.58 E-value=0.0061 Score=58.61 Aligned_cols=180 Identities=8% Similarity=-0.033 Sum_probs=104.0
Q ss_pred EEEEEEecCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCc
Q 046773 146 TCRCLTLSDL-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVAN 224 (453)
Q Consensus 146 ~v~~lafs~~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~ 224 (453)
+...|.|+++ +.+|.+.++.|++.|++||+.++++ - ....|+ .++++++++|..
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~Fg------eGit~~g~~Ly~----------------- 110 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFA------EGLASDGERLYQ----------------- 110 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCE------EEEEECSSCEEE-----------------
T ss_pred ccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcce------eEEEEeCCEEEE-----------------
Confidence 3578999875 6678888889999999999987776 2 111111 234444432221
Q ss_pred ceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC
Q 046773 225 ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS 304 (453)
Q Consensus 225 ~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~ 304 (453)
..-.++.+.++|.+|.+.+.- +.- ...-..++.++
T Consensus 111 ------------------------------ltw~~~~v~V~D~~Tl~~~~t--------------i~~-~~eGwGLt~Dg 145 (268)
T 3nok_A 111 ------------------------------LTWTEGLLFTWSGMPPQRERT--------------TRY-SGEGWGLCYWN 145 (268)
T ss_dssp ------------------------------EESSSCEEEEEETTTTEEEEE--------------EEC-SSCCCCEEEET
T ss_pred ------------------------------EEccCCEEEEEECCcCcEEEE--------------EeC-CCceeEEecCC
Confidence 112356677888888773310 000 00011234455
Q ss_pred CceEEEEcCCcEEEEECCCCceEEEE-e-eccCCe-EEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEEEEE
Q 046773 305 HESAVACTSSRVITFDLRNQGMVLGE-R-GYGRGL-YVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVCRFS 380 (453)
Q Consensus 305 ~~~~vas~d~tIrlWDl~t~~~~~~~-~-g~~~~~-~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~~l~ 380 (453)
+.++++..+++|.++|.+|.+.+.+. . .++... .++.+.+.+..+.... .+. .|.+-|..+|+.+..+.
T Consensus 146 ~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~-------~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 146 GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSS-------DVLEIDPATGTVVGVID 218 (268)
T ss_dssp TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCS-------EEEEECTTTCBEEEEEE
T ss_pred CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCC-------eEEEEeCCCCcEEEEEE
Confidence 55555555678999999998766553 2 111111 2344554444554443 344 88888999999888887
Q ss_pred ecC-------------CCeeEEEEeeCCCeEEEEe
Q 046773 381 LRA-------------DRNVNVMGCMNQGYALMCV 402 (453)
Q Consensus 381 ~~~-------------~~v~~~~~~~~~~~lls~s 402 (453)
+.+ +-...+++.++.+.+...+
T Consensus 219 l~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 219 ASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 641 2245677777666555443
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.49 E-value=0.037 Score=59.25 Aligned_cols=75 Identities=8% Similarity=0.029 Sum_probs=46.6
Q ss_pred ceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEecccCCce--EEEEecCCCEE
Q 046773 363 RLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSFRERIGEE--VIAFVGDDRHV 438 (453)
Q Consensus 363 ~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL~gh~~~~--V~a~s~d~~~l 438 (453)
..+.-||..||+.+-........ .+-.....++.+..++. +.|+.+|.+||+.|..++-..+.. -..+..||+..
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFAV-WGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQY 530 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC-CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CeEEEEECCCCCEEeEecCCCCc-cCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEE
Confidence 47888899999887766432211 11111224566666655 999999999999998875433220 11345788743
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.37 E-value=0.01 Score=61.34 Aligned_cols=192 Identities=12% Similarity=0.118 Sum_probs=111.4
Q ss_pred CCCceeeEEEEeeCCCeEEEeeCCCC--c-EEecccccCCcceeeeeeee--------eeccceeEEEEcCCceEEEEc-
Q 046773 245 GCSRYWVGLYAGLAGRAFHIWDRQAE--E-VFVGGDLTDHNTVMGWRMLT--------EFTEFVGRVRVTSHESAVACT- 312 (453)
Q Consensus 245 ~dg~~~~~LaSgS~D~tIrvWD~~tg--~-~~~g~~l~~~~~v~~w~~l~--------~h~~~v~~v~~s~~~~~vas~- 312 (453)
+++++ .+++|-.+.+|.|.|+.+. + .+. +++. +.+ .--.+...|+++++++.
T Consensus 93 ~~r~~--l~v~~l~s~~I~viD~~t~p~~p~~~-------------k~ie~~~~~~~~g~s-~Ph~~~~~pdGi~Vs~~g 156 (462)
T 2ece_A 93 IERRF--LIVPGLRSSRIYIIDTKPNPREPKII-------------KVIEPEEVKKVSGYS-RLHTVHCGPDAIYISALG 156 (462)
T ss_dssp CCSCE--EEEEBTTTCCEEEEECCSCTTSCEEE-------------EEECHHHHHHHHCEE-EEEEEEECSSCEEEEEEE
T ss_pred ccCCE--EEEccCCCCeEEEEECCCCCCCceee-------------eeechhhcccccCCC-cccceeECCCeEEEEcCC
Confidence 66665 3567888999999999864 1 111 1110 111 11235567777666532
Q ss_pred C------CcEEEEECCCCceEEEE-eeccCC--eEEEEEEecCCEEEEEeC-------CC---cc--ccCcceEEEEEcC
Q 046773 313 S------SRVITFDLRNQGMVLGE-RGYGRG--LYVTSVDVNAEAYIVVEN-------RE---LE--NQNRRLAIVRRVD 371 (453)
Q Consensus 313 d------~tIrlWDl~t~~~~~~~-~g~~~~--~~v~~~~~~g~~l~s~s~-------dg---~~--~~~~~~i~Iw~~~ 371 (453)
+ +.|-+.|.+|.+.+.+. .+.... .+-.-++|+++.+++..- .| ++ .+...+|.+||++
T Consensus 157 ~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~ 236 (462)
T 2ece_A 157 NEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR 236 (462)
T ss_dssp ETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT
T ss_pred CcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC
Confidence 2 57999999998877664 221111 111345788887766531 00 00 0112389999999
Q ss_pred CCeeEEEEEecCC--CeeEEEE--eeCCCeEEE-Ee-----C-CeEEEEECCCCeE--EEEe--ccc--C----------
Q 046773 372 TFEEVCRFSLRAD--RNVNVMG--CMNQGYALM-CV-----E-GVIRVWEVEGGEY--MYSF--RER--I---------- 424 (453)
Q Consensus 372 tg~~v~~l~~~~~--~v~~~~~--~~~~~~lls-~s-----~-~tIrlWD~~tG~~--l~tL--~gh--~---------- 424 (453)
+++.+.++..... ..+.+.| +|++++... +. . ++|-+|....|+. ++++ ... .
T Consensus 237 ~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 237 KRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp TTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGG
T ss_pred CCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccc
Confidence 9988888876422 2344444 778877653 44 4 7887766554432 1111 100 0
Q ss_pred ---CceEE--EEecCCCEEEEE--eCCcEEEEecC
Q 046773 425 ---GEEVI--AFVGDDRHVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 425 ---~~~V~--a~s~d~~~lasg--~D~~IklWDl~ 452 (453)
+.... .+++||++|-.+ ..+.|.++|+.
T Consensus 317 ~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 317 KAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 01012 689999998544 67899999973
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.35 E-value=0.1 Score=49.36 Aligned_cols=182 Identities=12% Similarity=-0.037 Sum_probs=104.2
Q ss_pred eEEEEEEecCC-EEEEEeCC--CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeec
Q 046773 145 LTCRCLTLSDL-YLACGFAD--GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDD 221 (453)
Q Consensus 145 v~v~~lafs~~-~LaSGS~D--~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~ 221 (453)
-+...|.|++. +..|.+.+ .+|+..|++||+.++++.-... .|| .++++++++|.-
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fg------eGi~~~~~~ly~-------------- 79 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFG------AGIVAWRDRLIQ-------------- 79 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCE------EEEEEETTEEEE--------------
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cce------eEEEEeCCEEEE--------------
Confidence 34678999986 44555554 5999999999999888753211 111 223333332211
Q ss_pred CCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 222 VANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 222 ~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
..-.++++.++|.+|.+.+.--.. + ..+ ..++
T Consensus 80 ---------------------------------ltw~~~~v~v~D~~tl~~~~ti~~--~--~~G-----------wglt 111 (243)
T 3mbr_X 80 ---------------------------------LTWRNHEGFVYDLATLTPRARFRY--P--GEG-----------WALT 111 (243)
T ss_dssp ---------------------------------EESSSSEEEEEETTTTEEEEEEEC--S--SCC-----------CEEE
T ss_pred ---------------------------------EEeeCCEEEEEECCcCcEEEEEeC--C--CCc-----------eEEe
Confidence 112356778888888773310000 0 011 1233
Q ss_pred EcCCceEEEEcCCcEEEEECCCCceEEEE-ee-ccCC-eEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEE
Q 046773 302 VTSHESAVACTSSRVITFDLRNQGMVLGE-RG-YGRG-LYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVC 377 (453)
Q Consensus 302 ~s~~~~~vas~d~tIrlWDl~t~~~~~~~-~g-~~~~-~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~ 377 (453)
.+++.++++..+++|.++|.+|.+.+.+. .+ ++.. ..++.+.+.+..+.... .+. .|.+-|..+|+.+.
T Consensus 112 ~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~-------~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 112 SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTS-------RIARIDPASGKVVA 184 (243)
T ss_dssp ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTT-------EEEEECTTTCBEEE
T ss_pred eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCC-------eEEEEECCCCCEEE
Confidence 44555666555678999999998766553 21 1111 12345555555555444 344 88889999999888
Q ss_pred EEEecC-------------CCeeEEEEeeCCCeEEEEe
Q 046773 378 RFSLRA-------------DRNVNVMGCMNQGYALMCV 402 (453)
Q Consensus 378 ~l~~~~-------------~~v~~~~~~~~~~~lls~s 402 (453)
.+.+.+ +-...++..++.+.+...+
T Consensus 185 ~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 185 WIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 887542 1234567777666665444
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.32 E-value=0.028 Score=61.52 Aligned_cols=236 Identities=6% Similarity=-0.029 Sum_probs=117.8
Q ss_pred EEEEEEec-C--CEEEEEe-----CCCcEEEEECCCC-eEEE-EecCCCCCccccccceEEEEE--EcCCeEEEEeCCC-
Q 046773 146 TCRCLTLS-D--LYLACGF-----ADGAVRLFDLTTR-LHVR-TFRPQHSDRLGQFSRAVSGII--ITDSQLIFATLDG- 212 (453)
Q Consensus 146 ~v~~lafs-~--~~LaSGS-----~D~TIrlWD~~tg-~~~~-tl~gh~~~~~~~~s~~V~~i~--f~g~~LasgS~D~- 212 (453)
.+...+|| + ++||-++ ...+|+++|+.+| +.+. .+.. ...+++ .||+.|+..+.|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-----------~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-----------TNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-----------ECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-----------ceeeEEEecCCCEEEEEEECCC
Confidence 36678888 6 5676332 2246999999999 6321 1111 011233 4677888888763
Q ss_pred ----CEEEEEeecCCc-c-eEEee-e-cceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc-EEecccccCCcc
Q 046773 213 ----DIHVAVIDDVAN-E-TRTAH-F-GSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE-VFVGGDLTDHNT 283 (453)
Q Consensus 213 ----tIkvWd~~~~g~-~-~~~~~-~-~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~-~~~g~~l~~~~~ 283 (453)
.|.++++.+ +. . .+... . ... ...+.+||||++++..........|.++|+.++. .+.
T Consensus 244 ~~~~~v~~~~lgt-~~~~~~lv~~~~~~~~---~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~--------- 310 (751)
T 2xe4_A 244 LRENKVWRHVMGK-LQSEDVCLYEEHNPLF---SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT--------- 310 (751)
T ss_dssp CCEEEEEEEETTS-CGGGCEEEEECCCTTC---EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC---------
T ss_pred CCCCEEEEEECCC-CchhcEEEEecCCCce---EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce---------
Confidence 355555554 21 1 11111 1 111 1247899999985422221234568888998762 110
Q ss_pred eeeeeee-eeeccceeEEEEc-CCceEEEEcC-----CcEEEEECCCCceEEE-EeeccCCeEEEEEEecCCEEEE-EeC
Q 046773 284 VMGWRML-TEFTEFVGRVRVT-SHESAVACTS-----SRVITFDLRNQGMVLG-ERGYGRGLYVTSVDVNAEAYIV-VEN 354 (453)
Q Consensus 284 v~~w~~l-~~h~~~v~~v~~s-~~~~~vas~d-----~tIrlWDl~t~~~~~~-~~g~~~~~~v~~~~~~g~~l~s-~s~ 354 (453)
...+ ....+...++.++ ++.++..+.. ..|.++|+.+++.... +..+.....+..+++.++.++. ...
T Consensus 311 ---~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~ 387 (751)
T 2xe4_A 311 ---LEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR 387 (751)
T ss_dssp ---EEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEE
T ss_pred ---eEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEe
Confidence 0001 1122334444432 4445555542 2466778875322122 2223334456778888877654 444
Q ss_pred CCccccCcceEEEE--Ec-------CCCeeEEEEEecCCCeeEEEE------eeCCCeEE-EEeC----CeEEEEECCCC
Q 046773 355 RELENQNRRLAIVR--RV-------DTFEEVCRFSLRADRNVNVMG------CMNQGYAL-MCVE----GVIRVWEVEGG 414 (453)
Q Consensus 355 dg~~~~~~~~i~Iw--~~-------~tg~~v~~l~~~~~~v~~~~~------~~~~~~ll-s~s~----~tIrlWD~~tG 414 (453)
++ ..+|+ +. ++++.+..+.+... .....+ ..++..++ +.++ .++.+.|+.+|
T Consensus 388 ~g-------~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~-~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 388 AG-------LTRIWTMMADSQDGVFKAGTGLREVVMEEP-IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp TT-------EEEEEEEECCTTTSCCCTTTCCEECCCCCS-SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred CC-------EEEEEEEecccccccccCCccceEECCCCc-eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 55 44554 43 33331344433221 112222 23444443 3333 68888899887
Q ss_pred eE
Q 046773 415 EY 416 (453)
Q Consensus 415 ~~ 416 (453)
+.
T Consensus 460 ~~ 461 (751)
T 2xe4_A 460 SR 461 (751)
T ss_dssp CE
T ss_pred cE
Confidence 53
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.32 E-value=0.021 Score=60.92 Aligned_cols=243 Identities=9% Similarity=0.052 Sum_probs=128.3
Q ss_pred EEEe-----cCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE----cCCeEEEEe---------
Q 046773 149 CLTL-----SDL-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII----TDSQLIFAT--------- 209 (453)
Q Consensus 149 ~laf-----s~~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f----~g~~LasgS--------- 209 (453)
.+.| +++ ..++...+.+|-+-|+.+.+|.+.+.-... ....++++ ++.++..++
T Consensus 91 ~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-------~~phg~~~~~~p~~~~v~~~~~~~~p~~~d 163 (595)
T 1fwx_A 91 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-------KGIHGLRPQKWPRSNYVFCNGEDETPLVND 163 (595)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-------CSEEEEEECCSSBCSEEEEEECSCEESSCS
T ss_pred ccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-------CCCcceeeeecCCCcEEEEecccccccCCC
Confidence 4666 555 455677778899999999999995531111 12344554 456665553
Q ss_pred ---------CCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCC---------------eEEEe
Q 046773 210 ---------LDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGR---------------AFHIW 265 (453)
Q Consensus 210 ---------~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~---------------tIrvW 265 (453)
.++++-+.|.++ ..-..+.-.+. .. ..++++|||++ +++.+.+. .|.|-
T Consensus 164 g~~l~~~~~~~~~vtvID~~t-~~v~~qI~Vgg-~p--d~~~~spdGk~---~~vt~~~se~~~~i~~~~~~~~d~v~V~ 236 (595)
T 1fwx_A 164 GTNMEDVANYVNVFTAVDADK-WEVAWQVLVSG-NL--DNCDADYEGKW---AFSTSYNSEKGMTLPEMTAAEMDHIVVF 236 (595)
T ss_dssp SSSTTCGGGEEEEEEEEETTT-TEEEEEEEESS-CC--CCEEECSSSSE---EEEEESCTTCCSSHHHHTCCSEEEEEEE
T ss_pred CcccccccccCceEEEEECCC-CeEEEEEEeCC-Cc--cceEECCCCCE---EEEEecCcccCcchhhccccccceEEEe
Confidence 233555666554 21111111111 11 23789999998 45555432 24444
Q ss_pred eCCCCc--------EEecc-cccCCcc--eee-eeeeeeeccceeEEEEcCCce-EEEEc--CCcEEEEECCCCc-----
Q 046773 266 DRQAEE--------VFVGG-DLTDHNT--VMG-WRMLTEFTEFVGRVRVTSHES-AVACT--SSRVITFDLRNQG----- 325 (453)
Q Consensus 266 D~~tg~--------~~~g~-~l~~~~~--v~~-w~~l~~h~~~v~~v~~s~~~~-~vas~--d~tIrlWDl~t~~----- 325 (453)
|..+.+ ...+. ++-|... -.- ..++.. .....+|.++|++. +.+++ +.+|-+.|+++.+
T Consensus 237 ~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~ 315 (595)
T 1fwx_A 237 NIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYE 315 (595)
T ss_dssp EHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHS
T ss_pred eccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccc
Confidence 433221 00000 0000000 000 001110 01224588999885 33343 4789999999652
Q ss_pred ------eEEEE--eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCC----------CeeEEEEEecCC-Ce
Q 046773 326 ------MVLGE--RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDT----------FEEVCRFSLRAD-RN 386 (453)
Q Consensus 326 ------~~~~~--~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~t----------g~~v~~l~~~~~-~v 386 (453)
++... .|. +-.=.+|+++|..+++.-.|+ ++.+|++++ .+.+.++..+-. +.
T Consensus 316 ~l~~~~~v~~~v~vG~--gP~h~aF~~dG~aY~t~~lds-------qV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh 386 (595)
T 1fwx_A 316 NADPRSAVVAEPELGL--GPLHTAFDGRGNAYTSLFLDS-------QVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGH 386 (595)
T ss_dssp CCCGGGGEEECCBCCS--CEEEEEECTTSEEEEEETTTT-------EEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEE
T ss_pred ccCcccceEEEcCCCC--CcceEEECCCCeEEEEEecCC-------cEEEEEhhHhhhhhcccccceeEEEeeccccccc
Confidence 12222 222 223367888885556666677 999999887 456677766532 11
Q ss_pred eE----EEEeeCCCeEEEEeC---CeE-----------EEEECCCCe
Q 046773 387 VN----VMGCMNQGYALMCVE---GVI-----------RVWEVEGGE 415 (453)
Q Consensus 387 ~~----~~~~~~~~~lls~s~---~tI-----------rlWD~~tG~ 415 (453)
.. ...++||++++++.. ..+ .|.|+.+++
T Consensus 387 ~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 387 LKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred ceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 11 133578999887643 233 889996654
No 258
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.18 E-value=0.1 Score=55.93 Aligned_cols=108 Identities=7% Similarity=-0.054 Sum_probs=60.5
Q ss_pred cCCEEEEEeCCC-----------cEEEEECCCCeEEE--EecCCCCCccccccceEEEEEEcCCeEEEEeC-CCCEEEEE
Q 046773 153 SDLYLACGFADG-----------AVRLFDLTTRLHVR--TFRPQHSDRLGQFSRAVSGIIITDSQLIFATL-DGDIHVAV 218 (453)
Q Consensus 153 s~~~LaSGS~D~-----------TIrlWD~~tg~~~~--tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~-D~tIkvWd 218 (453)
++++++.|+.+. .+.+||+.+++... .+...+. . +... .++..++..+++|+. +.++.+||
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~-~---~~~~-~~~~~~g~lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD-M---FCPG-ISMDGNGQIVVTGGNDAKKTSLYD 271 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC-C---SSCE-EEECTTSCEEEECSSSTTCEEEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC-C---cccc-ccCCCCCCEEEeCCCCCCceEEec
Confidence 557888887654 68999999997432 2211111 0 0001 112346888899885 55789998
Q ss_pred eecCCcceEE-eeecceecCceEEEEeCCCceeeEEEEee-CC-----CeEEEeeCCCCc
Q 046773 219 IDDVANETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGL-AG-----RAFHIWDRQAEE 271 (453)
Q Consensus 219 ~~~~g~~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-~D-----~tIrvWD~~tg~ 271 (453)
..+....... .+.. .....+++.++|+. ++.|+ .+ .++.+||.++++
T Consensus 272 ~~t~~W~~~~~~~~~---R~~~s~~~~~dg~i---yv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 272 SSSDSWIPGPDMQVA---RGYQSSATMSDGRV---FTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp GGGTEEEECCCCSSC---CSSCEEEECTTSCE---EEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CcCCceeECCCCCcc---ccccceEEecCCeE---EEEeCcccCCcccccceEeCCCCCc
Confidence 7651111110 0000 01123455567775 44555 44 679999999887
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.10 E-value=0.041 Score=60.26 Aligned_cols=188 Identities=4% Similarity=-0.105 Sum_probs=99.3
Q ss_pred EEEe-CCCceeeEEEE--eeCCCeEEEeeCCCC-cEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcC-
Q 046773 241 IDFT-GCSRYWVGLYA--GLAGRAFHIWDRQAE-EVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTS- 313 (453)
Q Consensus 241 v~Fs-~dg~~~~~LaS--gS~D~tIrvWD~~tg-~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d- 313 (453)
..|| |||++++...+ |+...+|+|+|+++| +.+. . .+.. ....+.++|++ ++..+.+
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-------~------~~~~---~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-------D------KVSG---TNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-------C------CEEE---ECSCCEECSSTTEEEEEEECT
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-------c------cccC---ceeeEEEecCCCEEEEEEECC
Confidence 6899 99997432222 233357999999999 6321 0 0111 12356788776 3444443
Q ss_pred ----CcEEEEECCCCce--EEEEe-eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe-eE--EEEEecC
Q 046773 314 ----SRVITFDLRNQGM--VLGER-GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE-EV--CRFSLRA 383 (453)
Q Consensus 314 ----~tIrlWDl~t~~~--~~~~~-g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~-~v--~~l~~~~ 383 (453)
..|.++++.+++. .+... ....-..-..++++|+.++..+.+. ....+.++++++++ .. ..+....
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~~d~~~~~~~~~~~~l~~~~ 318 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP----ETAEVHLLDLRKGNAHNTLEIVRPRE 318 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS----SCEEEEEEESSSCTTCCCEEESSCCC
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC----CCceEEEEECCCCCCCceeEEeecCC
Confidence 2588899988642 12211 1111222346788898887766443 12256677777652 22 3332222
Q ss_pred CC-eeEEEEeeCCCeEEEEeC------CeEEEEECCCCeEEEE-ecccC-CceEEEEecCCCEEE-EE-eCCcEEEE
Q 046773 384 DR-NVNVMGCMNQGYALMCVE------GVIRVWEVEGGEYMYS-FRERI-GEEVIAFVGDDRHVA-AS-CGTNIHLW 449 (453)
Q Consensus 384 ~~-v~~~~~~~~~~~lls~s~------~tIrlWD~~tG~~l~t-L~gh~-~~~V~a~s~d~~~la-sg-~D~~IklW 449 (453)
.. ..+..+ .+++.++..+. ..|.++|+.++..... +-.|. +..+..+++++..|+ +. .|+..+||
T Consensus 319 ~~~~~s~~~-~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 319 KGVRYDVQM-HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp TTCCEEEEE-ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEE
T ss_pred CCceEEEee-eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEE
Confidence 21 122111 23676655432 3677778876433233 32233 323557777776654 55 78866555
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.67 E-value=0.13 Score=55.16 Aligned_cols=235 Identities=9% Similarity=-0.060 Sum_probs=113.3
Q ss_pred cCCeEEEEeCCC-----------CEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEee-CCCeEEEeeCC
Q 046773 201 TDSQLIFATLDG-----------DIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL-AGRAFHIWDRQ 268 (453)
Q Consensus 201 ~g~~LasgS~D~-----------tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-~D~tIrvWD~~ 268 (453)
++..++.|+.+. .+.+||..+.....+.........-...+++.++|+. ++.|+ .+.++.+||..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~l---yv~GG~~~~~v~~yd~~ 273 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQI---VVTGGNDAKKTSLYDSS 273 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCE---EEECSSSTTCEEEEEGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCE---EEeCCCCCCceEEecCc
Confidence 677788887654 4677887662122211100000000113567788885 45665 56689999999
Q ss_pred CCcEEecccccCCcceeeeeeeeeeccceeEEEEc-CCceEEEEc--C-----CcEEEEECCCCceEEEE-e--e--ccC
Q 046773 269 AEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVT-SHESAVACT--S-----SRVITFDLRNQGMVLGE-R--G--YGR 335 (453)
Q Consensus 269 tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s-~~~~~vas~--d-----~tIrlWDl~t~~~~~~~-~--g--~~~ 335 (453)
+++-.....++.+ ... .++.+. .+.+++.++ + .++.+||+.++...... . . ...
T Consensus 274 t~~W~~~~~~~~~------------R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~ 340 (656)
T 1k3i_A 274 SDSWIPGPDMQVA------------RGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA 340 (656)
T ss_dssp GTEEEECCCCSSC------------CSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC
T ss_pred CCceeECCCCCcc------------ccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc
Confidence 8872211111111 011 122333 233433332 2 46999999987533210 0 0 000
Q ss_pred CeEEEEEEecCCEEEEEeCCCccc--cCcceEEEEEcCCCeeEEEEEecCC---------CeeEEEEeeCCCeEEEEeC-
Q 046773 336 GLYVTSVDVNAEAYIVVENRELEN--QNRRLAIVRRVDTFEEVCRFSLRAD---------RNVNVMGCMNQGYALMCVE- 403 (453)
Q Consensus 336 ~~~v~~~~~~g~~l~s~s~dg~~~--~~~~~i~Iw~~~tg~~v~~l~~~~~---------~v~~~~~~~~~~~lls~s~- 403 (453)
.. ...+..++..++.+..++... ....++..+|..+.+....+...+. ....+++...++.++.+++
T Consensus 341 ~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~ 419 (656)
T 1k3i_A 341 DK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGS 419 (656)
T ss_dssp CT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCB
T ss_pred cc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCC
Confidence 00 001112334445554443100 0122677888877654433322211 1222333333445554432
Q ss_pred ---------C---eEEEEECCCCeEEEEe--cccCCc-e-EEEEecCCCEEEEE-eC-----------CcEEEEecC
Q 046773 404 ---------G---VIRVWEVEGGEYMYSF--RERIGE-E-VIAFVGDDRHVAAS-CG-----------TNIHLWDFG 452 (453)
Q Consensus 404 ---------~---tIrlWD~~tG~~l~tL--~gh~~~-~-V~a~s~d~~~lasg-~D-----------~~IklWDl~ 452 (453)
. .|.+||.++.+..... .-+... . ...+.||+++++.| .+ ..+.+||..
T Consensus 420 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 420 PDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp SSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred CCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC
Confidence 1 7899999988765443 222222 0 11445799998887 54 468888853
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.62 E-value=0.28 Score=47.01 Aligned_cols=192 Identities=10% Similarity=0.044 Sum_probs=96.7
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcE--Eeccc-ccC---CcceeeeeeeeeeccceeEEEEcC-Cc-eEEEEc
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEV--FVGGD-LTD---HNTVMGWRMLTEFTEFVGRVRVTS-HE-SAVACT 312 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~--~~g~~-l~~---~~~v~~w~~l~~h~~~v~~v~~s~-~~-~~vas~ 312 (453)
++++++|+. |+++..++.|..||..+++. +.... ... ....... ...........+++++ ++ ++++..
T Consensus 24 i~~d~~g~~---l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 24 FTFDSTNKG---FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDA-EKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp EECCTTCSS---EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCG-GGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred EEEcCCCCE---EEEEcCCCeEEEECCCCCceEEEecccccccccccccccch-hccccCCCCceEEEcCCCCcEEEEEC
Confidence 788899874 56778889999999887652 21000 000 0000000 0000112456788886 54 556555
Q ss_pred CCcEEEEECCCCceEEEE--eecc---CCeEEEEEEe-cCCEEEEEeCCCc----------cccCcceEEEEEcCCCeeE
Q 046773 313 SSRVITFDLRNQGMVLGE--RGYG---RGLYVTSVDV-NAEAYIVVENREL----------ENQNRRLAIVRRVDTFEEV 376 (453)
Q Consensus 313 d~tIrlWDl~t~~~~~~~--~g~~---~~~~v~~~~~-~g~~l~s~s~dg~----------~~~~~~~i~Iw~~~tg~~v 376 (453)
...|..+|+.++.. ..+ .... ....-.++++ +|+.+++-+...- .......+..++.++++..
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 56688899886532 111 1110 1112244566 6766665432100 0001124556666666532
Q ss_pred EEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCC---e--EEEEecccCCceEEEEecCCCEEEEE
Q 046773 377 CRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGG---E--YMYSFRERIGEEVIAFVGDDRHVAAS 441 (453)
Q Consensus 377 ~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG---~--~l~tL~gh~~~~V~a~s~d~~~lasg 441 (453)
.... .......++++++++++..+. . +.|.++|+.+. + .+..+.+ .+. .++.++|++.++.
T Consensus 179 ~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~g--i~~d~~G~l~va~ 246 (322)
T 2fp8_A 179 LLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGN--IKRNADGHFWVSS 246 (322)
T ss_dssp EEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEE--EEECTTSCEEEEE
T ss_pred Eecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCC--eEECCCCCEEEEe
Confidence 2111 111234577888887666553 3 89999998752 2 2222333 111 1566788766654
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.60 E-value=0.53 Score=44.88 Aligned_cols=181 Identities=7% Similarity=-0.099 Sum_probs=92.7
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce-EEEEcC-Cc--
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-AVACTS-SR-- 315 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-~vas~d-~t-- 315 (453)
.++++++|+. +++-..++.|..+|.+++.... + ........+++++++. +++... ..
T Consensus 36 gia~~~~g~l---yv~d~~~~~I~~~d~~g~~~~~------------~----~~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 36 NLASAPDGTI---FVTNHEVGEIVSITPDGNQQIH------------A----TVEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp EEEECTTSCE---EEEETTTTEEEEECTTCCEEEE------------E----ECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred eEEECCCCCE---EEEeCCCCeEEEECCCCceEEE------------E----eCCCCceeEEEcCCCcEEEEeccCCcce
Confidence 3788999874 3454567889999987654210 0 1113467788987764 444422 23
Q ss_pred EEEEECCCCceEEEEe-eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCe-eEEEEEe-----c--C--C
Q 046773 316 VITFDLRNQGMVLGER-GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFE-EVCRFSL-----R--A--D 384 (453)
Q Consensus 316 IrlWDl~t~~~~~~~~-g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~-~v~~l~~-----~--~--~ 384 (453)
|..+|..+++...... .......-.++...+..+++-+..+ .+.+.+..+++ .+..... . . .
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g-------~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG-------AIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTT-------EEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCC-------eEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 6667888775432111 1111111112222222333333345 44455554432 1211110 0 0 1
Q ss_pred CeeEEEEeeCCCeEEEEeC--CeEEEEECCC-CeE-----EEEecccCCceEEEEecCCCEEEEE-eCCcEEEEec
Q 046773 385 RNVNVMGCMNQGYALMCVE--GVIRVWEVEG-GEY-----MYSFRERIGEEVIAFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 385 ~v~~~~~~~~~~~lls~s~--~tIrlWD~~t-G~~-----l~tL~gh~~~~V~a~s~d~~~lasg-~D~~IklWDl 451 (453)
....+ +++++++..+.. +.|..+|+.. |+. +..+ ...+. .++.+||+..++. ..+.|.++|.
T Consensus 170 ~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~g--i~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 170 AANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDD--FAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp SEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSS--EEEBTTCCEEEECBTTCCEEEECT
T ss_pred cCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCC--eEECCCCCEEEEeCCCCeEEEECC
Confidence 12233 677777766554 8999999875 431 1122 12222 1667888876665 5677877763
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.53 E-value=1.2 Score=48.36 Aligned_cols=279 Identities=8% Similarity=-0.022 Sum_probs=153.0
Q ss_pred EEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCC-eEEEEeCCCCEEEEEeecCCc
Q 046773 147 CRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDS-QLIFATLDGDIHVAVIDDVAN 224 (453)
Q Consensus 147 v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~-~LasgS~D~tIkvWd~~~~g~ 224 (453)
|+|+..+. ..|--|+.+ .|.++|..+++..+.... .....+.....|.+|..|.+ .|-.|+.++-|..++..+...
T Consensus 265 i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~ 342 (795)
T 4a2l_A 265 IRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSN-PVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRF 342 (795)
T ss_dssp EEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCC-TTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSS
T ss_pred EEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecC-CCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccc
Confidence 78898874 344455655 799999999876543221 11001111236888888743 466788878888887654111
Q ss_pred ceEEee--ecceecCce-EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEE-ecccccCCcceeeeeeeeeeccceeEE
Q 046773 225 ETRTAH--FGSVMDDGV-LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVF-VGGDLTDHNTVMGWRMLTEFTEFVGRV 300 (453)
Q Consensus 225 ~~~~~~--~~~v~~~~~-~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~-~g~~l~~~~~v~~w~~l~~h~~~v~~v 300 (453)
..+... ......+.+ .+..+++|..| .|+.++-|..+|..+++.. ......++. ..+ ....|.++
T Consensus 343 ~~~~~~~~~~~l~~~~V~~i~~d~~g~lW----iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~-----~~l--~~~~v~~i 411 (795)
T 4a2l_A 343 KNIRNIPYKNSLSDNVVSCIVEDKDKNLW----IGTNDGGLNLYNPITQRFTSYTLQEDESA-----RGI--GSNNIKAV 411 (795)
T ss_dssp EEECCCTTSSSCSCSSEEEEEECTTSCEE----EEESSSCEEEECTTTCCEEEECCC-----------CC--SCSCEEEE
T ss_pred eEEcCCCCCCCCCCCeeEEEEECCCCCEE----EEECCCCeEEEcCCCCcEEEEecCCCCcc-----cCC--CCccEEEE
Confidence 211110 011111222 36677888855 4788878999999887621 100000000 000 12457888
Q ss_pred EEcCCc--eEEEEcCCcEEEEECCCCceEEEEe--eccCCeEEEEEEecC-CEEEEEeCCCccccCcceEEEEEcCCCee
Q 046773 301 RVTSHE--SAVACTSSRVITFDLRNQGMVLGER--GYGRGLYVTSVDVNA-EAYIVVENRELENQNRRLAIVRRVDTFEE 375 (453)
Q Consensus 301 ~~s~~~--~~vas~d~tIrlWDl~t~~~~~~~~--g~~~~~~v~~~~~~g-~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~ 375 (453)
..++++ +.+++.++.+.++|.++++...-.. .......|.++..+. ..+-.++..| +.+++..+++.
T Consensus 412 ~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~G--------l~~~~~~~~~~ 483 (795)
T 4a2l_A 412 YVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSA--------LVRFNPEQRSF 483 (795)
T ss_dssp EEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSC--------EEEEETTTTEE
T ss_pred EEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCc--------eeEEeCCCCeE
Confidence 877555 6777776789999999876432211 001123456665543 2344455544 55677766543
Q ss_pred EEEEE------ecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEec-------ccCCceEEEEe--cCCCEEEE
Q 046773 376 VCRFS------LRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFR-------ERIGEEVIAFV--GDDRHVAA 440 (453)
Q Consensus 376 v~~l~------~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~-------gh~~~~V~a~s--~d~~~las 440 (453)
..... +....+..+....++...+.+. +-|.+||..+++. .+. .+... |.++. ++|++.++
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~-i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLF-TNCIYEASNGIIWVG 559 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSC-EEEEEECTTSCEEEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCe-eEEEEECCCCCEEEE
Confidence 22111 1124466666666666655444 5688899988876 222 12334 77664 56775554
Q ss_pred EeCCcEEEEec
Q 046773 441 SCGTNIHLWDF 451 (453)
Q Consensus 441 g~D~~IklWDl 451 (453)
... .|..||.
T Consensus 560 T~~-Gl~~~d~ 569 (795)
T 4a2l_A 560 TRE-GFYCFNE 569 (795)
T ss_dssp ESS-CEEEEET
T ss_pred eCC-CceeECC
Confidence 433 5556653
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.26 E-value=0.85 Score=43.52 Aligned_cols=228 Identities=8% Similarity=-0.030 Sum_probs=121.7
Q ss_pred EEEc--CCeEEEEeCCCCEEEEEeecCCcceEEeee---------c-------ceecCceEEEEeC-CCceeeEEEEeeC
Q 046773 198 IIIT--DSQLIFATLDGDIHVAVIDDVANETRTAHF---------G-------SVMDDGVLIDFTG-CSRYWVGLYAGLA 258 (453)
Q Consensus 198 i~f~--g~~LasgS~D~tIkvWd~~~~g~~~~~~~~---------~-------~v~~~~~~v~Fs~-dg~~~~~LaSgS~ 258 (453)
++++ ++.+.++..++.|..|+.++.....+.... + ........++|++ +|+. +.+..
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l----~v~d~ 99 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL----YIVDC 99 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE----EEEET
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcE----EEEEC
Confidence 5554 455777778888888876651122221100 0 0001122478997 7764 44555
Q ss_pred CCeEEEeeCCCCc--EEecccccCCcceeeeeeeee-eccceeEEEEcC-Cce-EEEEcC------------------Cc
Q 046773 259 GRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTE-FTEFVGRVRVTS-HES-AVACTS------------------SR 315 (453)
Q Consensus 259 D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~-h~~~v~~v~~s~-~~~-~vas~d------------------~t 315 (453)
.+.|.++|..+++ .+.. ...+ .....+.+++++ ++. .++... +.
T Consensus 100 ~~~i~~~d~~~g~~~~~~~-------------~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLAT-------------SVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp TTEEEEECTTCEECEEEES-------------EETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCCEEEEecc-------------cCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce
Confidence 5668888988775 2210 0000 012456788888 664 444322 45
Q ss_pred EEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEE-eCCCccccCcceEEEEEcCCCe--eEEEEEecCCCeeEEEEe
Q 046773 316 VITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVV-ENRELENQNRRLAIVRRVDTFE--EVCRFSLRADRNVNVMGC 392 (453)
Q Consensus 316 IrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~-s~dg~~~~~~~~i~Iw~~~tg~--~v~~l~~~~~~v~~~~~~ 392 (453)
|..+|..+++......+-... .-.+++++++.+..+ +..+ .|.+++.+... ....+...+. ...++..
T Consensus 167 v~~~d~~~~~~~~~~~~~~~p-~gia~~~dg~~lyv~d~~~~-------~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d 237 (322)
T 2fp8_A 167 LIKYDPSTKETTLLLKELHVP-GGAEVSADSSFVLVAEFLSH-------QIVKYWLEGPKKGTAEVLVKIPN-PGNIKRN 237 (322)
T ss_dssp EEEEETTTTEEEEEEEEESCC-CEEEECTTSSEEEEEEGGGT-------EEEEEESSSTTTTCEEEEEECSS-EEEEEEC
T ss_pred EEEEeCCCCEEEEeccCCccC-cceEECCCCCEEEEEeCCCC-------eEEEEECCCCcCCccceEEeCCC-CCCeEEC
Confidence 888898876532221110111 114677777755444 4445 77777776421 1222221122 4566777
Q ss_pred eCCCeEEEEeC-----------CeEEEEECCCCeEEEEecccCC---ceEEEEe-cCCCEEEEE-eCCcEEEEecC
Q 046773 393 MNQGYALMCVE-----------GVIRVWEVEGGEYMYSFRERIG---EEVIAFV-GDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 393 ~~~~~lls~s~-----------~tIrlWD~~tG~~l~tL~gh~~---~~V~a~s-~d~~~lasg-~D~~IklWDl~ 452 (453)
+++...++... +.|...|. .|+.+..+....+ ..+..+. .+++..++. ..+.|..+++.
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 77776665432 56777887 4887777754322 1133332 456555666 77888888764
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.23 E-value=1.8 Score=47.02 Aligned_cols=277 Identities=9% Similarity=0.042 Sum_probs=152.4
Q ss_pred EEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcC-CeEEEEeCCCCEEEEEeecCC-
Q 046773 147 CRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD-SQLIFATLDGDIHVAVIDDVA- 223 (453)
Q Consensus 147 v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g-~~LasgS~D~tIkvWd~~~~g- 223 (453)
|.++..+. ..|--|+.++-|.+||..+++.......... ........|.+|..+. ..|..|+.+ -|.++|..+ +
T Consensus 217 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~-~~ 293 (795)
T 4a2l_A 217 IQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSN-PKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGT-DS 293 (795)
T ss_dssp EEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTC-TTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTT-TE
T ss_pred eEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCC-ccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCC-Ce
Confidence 67777653 3455566666699999999876543221100 0001123588888873 345556655 677787654 2
Q ss_pred cceEEee---ecceecCce-EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeeccce
Q 046773 224 NETRTAH---FGSVMDDGV-LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTEFV 297 (453)
Q Consensus 224 ~~~~~~~---~~~v~~~~~-~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~~v 297 (453)
...+... ......+.+ .+..+++|..| .|+.++-|..+|..+++ .+.. . ..++ .| ....|
T Consensus 294 ~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW----igt~~~Gl~~~~~~~~~~~~~~~-~-~~~~------~l--~~~~V 359 (795)
T 4a2l_A 294 FASYSSNPVENGSLSQRSVRSIFMDSQGGMW----LGTYFGGLNYYHPIRNRFKNIRN-I-PYKN------SL--SDNVV 359 (795)
T ss_dssp EEEECCCTTSTTSCSSSCEEEEEECTTSCEE----EEESSSCEEEECGGGGSSEEECC-C-TTSS------SC--SCSSE
T ss_pred EEEEecCCCCCCCCCCCcEEEEEEeCCcCEE----EEECCCCeEEeCCCcccceEEcC-C-CCCC------CC--CCCee
Confidence 1111100 011111222 37778888865 57788889999987765 2210 0 0000 01 12458
Q ss_pred eEEEEcCCc-eEEEEcCCcEEEEECCCCceEEEEeec------cCCeEEEEEEe--cCCEEEEEeCCCccccCcceEEEE
Q 046773 298 GRVRVTSHE-SAVACTSSRVITFDLRNQGMVLGERGY------GRGLYVTSVDV--NAEAYIVVENRELENQNRRLAIVR 368 (453)
Q Consensus 298 ~~v~~s~~~-~~vas~d~tIrlWDl~t~~~~~~~~g~------~~~~~v~~~~~--~g~~l~s~s~dg~~~~~~~~i~Iw 368 (453)
.++..++++ +.+++.++-|..||..++......... -....|.++.. +++.+-.++.++ -+.++
T Consensus 360 ~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~-------Gl~~~ 432 (795)
T 4a2l_A 360 SCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAG-------GLSIL 432 (795)
T ss_dssp EEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTT-------EEEEE
T ss_pred EEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcC-------ceeEE
Confidence 888888665 566666678999999887543321110 01233556544 444266677666 56777
Q ss_pred EcCCCeeEEEEE-----ecCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecc------cCCceEEEEe--cCC
Q 046773 369 RVDTFEEVCRFS-----LRADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRE------RIGEEVIAFV--GDD 435 (453)
Q Consensus 369 ~~~tg~~v~~l~-----~~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~g------h~~~~V~a~s--~d~ 435 (453)
+..+++. ..+. +....+..+....++...+.+. +-|.++|.++++....... .... |.++. +++
T Consensus 433 d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~~d~~g 509 (795)
T 4a2l_A 433 HRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQ-ITTLFRDSHK 509 (795)
T ss_dssp ETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCC-EEEEEECTTC
T ss_pred eCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCce-EEEEEECCCC
Confidence 7777653 2232 1234466776666666555443 5588899998876433211 1234 77654 566
Q ss_pred CEEEEEeCCcEEEEec
Q 046773 436 RHVAASCGTNIHLWDF 451 (453)
Q Consensus 436 ~~lasg~D~~IklWDl 451 (453)
+..++.. +.|..||.
T Consensus 510 ~lWigt~-~Gl~~~~~ 524 (795)
T 4a2l_A 510 RLWIGGE-EGLSVFKQ 524 (795)
T ss_dssp CEEEEES-SCEEEEEE
T ss_pred CEEEEeC-CceEEEeC
Confidence 6555434 45666654
No 266
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.15 E-value=0.82 Score=42.28 Aligned_cols=195 Identities=9% Similarity=-0.039 Sum_probs=105.3
Q ss_pred EEEEEEc--CCeEEEE-eCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc
Q 046773 195 VSGIIIT--DSQLIFA-TLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE 271 (453)
Q Consensus 195 V~~i~f~--g~~Lasg-S~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~ 271 (453)
..+++++ +..|..+ ...+.|.+.+.++ + .......... .....++|+|++..+ .++-...+.|.+.|.....
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g-~-~~~~~~~~~~-~~p~~ia~d~~~~~l--yv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHG-G-EPTTIIRQDL-GSPEGIALDHLGRTI--FWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSS-C-CCEEEECTTC-CCEEEEEEETTTTEE--EEEETTTTEEEEEETTSCS
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCC-C-CcEEEEECCC-CCccEEEEEecCCeE--EEEECCCCEEEEEEcCCCC
Confidence 4567776 3455544 4467788888765 2 1111111110 112348899976541 3344566789999986543
Q ss_pred --EEecccccCCcceeeeeeeeeeccceeEEEEcC-Cc-eEEEEcC---CcEEEEECCCCceEEEE-eeccCCeEEEEEE
Q 046773 272 --VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS-HE-SAVACTS---SRVITFDLRNQGMVLGE-RGYGRGLYVTSVD 343 (453)
Q Consensus 272 --~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~-~~-~~vas~d---~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~ 343 (453)
.+.. .+. ...+.++++| ++ +.++... +.|...++.... .... ......-.-.+++
T Consensus 113 ~~~~~~---------------~~~-~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 113 RRVLFD---------------TGL-VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp CEEEEC---------------SSC-SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEE
T ss_pred EEEEEE---------------CCC-CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEc
Confidence 2110 011 2346788887 34 4555432 578888886432 1111 1111112224566
Q ss_pred ecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEEECCCCeEEEEe
Q 046773 344 VNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 344 ~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~tG~~l~tL 420 (453)
++++.+..+. ..+ .|.+.+.+.......+. ....-..+ +++++++..+.. +.|.+.|..+|+.+.++
T Consensus 176 ~~~~~lyv~d~~~~-------~I~~~~~~g~~~~~~~~-~~~~P~gi--~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 176 AFSSQLCWVDAGTH-------RAECLNPAQPGRRKVLE-GLQYPFAV--TSYGKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTTEEEEEETTTT-------EEEEEETTEEEEEEEEE-CCCSEEEE--EEETTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCC-------EEEEEecCCCceEEEec-CCCCceEE--EEeCCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 6666655444 344 77777776543222222 11122333 345666665543 89999999999999888
Q ss_pred c
Q 046773 421 R 421 (453)
Q Consensus 421 ~ 421 (453)
.
T Consensus 246 ~ 246 (267)
T 1npe_A 246 H 246 (267)
T ss_dssp C
T ss_pred c
Confidence 5
No 267
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.13 E-value=0.32 Score=51.81 Aligned_cols=146 Identities=8% Similarity=-0.043 Sum_probs=91.1
Q ss_pred ceEEEEcC-CcEEEEECCCCceEEEE-eeccCCeEEEEE-E-ecCCEEEEEeCC-------C----ccccCcceEEEEEc
Q 046773 306 ESAVACTS-SRVITFDLRNQGMVLGE-RGYGRGLYVTSV-D-VNAEAYIVVENR-------E----LENQNRRLAIVRRV 370 (453)
Q Consensus 306 ~~~vas~d-~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~-~-~~g~~l~s~s~d-------g----~~~~~~~~i~Iw~~ 370 (453)
-+++...+ .+|.+-|+++.+|.... ...++...-.++ + |++++++.++.. | ..+..+.++.+.|.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 35565443 57999999999876532 111222222344 4 788887776422 1 11233558999999
Q ss_pred CCCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC---------------------------------------CeEEEEEC
Q 046773 371 DTFEEVCRFSLRADRNVNVMGCMNQGYALMCVE---------------------------------------GVIRVWEV 411 (453)
Q Consensus 371 ~tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~---------------------------------------~tIrlWD~ 411 (453)
++.+.+.++.... .-..+..+++++++.+++. +.|.|-|.
T Consensus 183 ~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~ 261 (595)
T 1fwx_A 183 DKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDG 261 (595)
T ss_dssp TTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEEC
T ss_pred CCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeC
Confidence 9988777765422 1234567777777766542 25888999
Q ss_pred CC--CeE-EEEecccCCceEEEEecCCCEEEE-E-eCCcEEEEecC
Q 046773 412 EG--GEY-MYSFRERIGEEVIAFVGDDRHVAA-S-CGTNIHLWDFG 452 (453)
Q Consensus 412 ~t--G~~-l~tL~gh~~~~V~a~s~d~~~las-g-~D~~IklWDl~ 452 (453)
++ ++. +.+++.....-=..++|||+++.. + .+.+|.+.|+.
T Consensus 262 ~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 262 RKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp SGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred cccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 88 655 555543222101268999998754 4 78899999975
No 268
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.03 E-value=0.93 Score=41.90 Aligned_cols=189 Identities=4% Similarity=-0.133 Sum_probs=100.9
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC-c-eEEEEc-CCcE
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH-E-SAVACT-SSRV 316 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~-~-~~vas~-d~tI 316 (453)
.++++++++.+ .++-...+.|.++|..++.... .+..-......++++++ + +.++.. .++|
T Consensus 40 gi~~d~~~~~l--y~~d~~~~~I~~~~~~g~~~~~--------------~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 40 GLAFDCVDKVV--YWTDISEPSIGRASLHGGEPTT--------------IIRQDLGSPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEETTTTEE--EEEETTTTEEEEEESSSCCCEE--------------EECTTCCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEecCCCEE--EEEECCCCEEEEEecCCCCcEE--------------EEECCCCCccEEEEEecCCeEEEEECCCCEE
Confidence 47899976642 3455567899999997764110 00000123567888863 3 455544 3689
Q ss_pred EEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE-ecCCCeeEEEEeeCC
Q 046773 317 ITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS-LRADRNVNVMGCMNQ 395 (453)
Q Consensus 317 rlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~-~~~~~v~~~~~~~~~ 395 (453)
.+.|+...............-.-.++++++..+..+.... +...|.+.+.+. +....+. .....-..+++++++
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS----SSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTT
T ss_pred EEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC----CCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCC
Confidence 9999875332111111111122245677555554443321 001555556553 2222232 111234567788877
Q ss_pred CeEEEEeC--CeEEEEECCCCeEEEEecccCCceEEEEecCCCEE-EEE-eCCcEEEEec
Q 046773 396 GYALMCVE--GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHV-AAS-CGTNIHLWDF 451 (453)
Q Consensus 396 ~~lls~s~--~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~l-asg-~D~~IklWDl 451 (453)
+++..+.. +.|.+.|+.++.....+.+ ... -..+.+|+..| ++. ..+.|...|.
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~-P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQY-PFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEEC-CCS-EEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEecC-CCC-ceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 77765544 8999999986544333332 122 23455556655 444 5678887775
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.93 E-value=8.4 Score=41.61 Aligned_cols=281 Identities=11% Similarity=0.024 Sum_probs=141.4
Q ss_pred EEEEEecCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcC-CeEEEEeCCCCEEEEEeecCCc
Q 046773 147 CRCLTLSDL-YLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD-SQLIFATLDGDIHVAVIDDVAN 224 (453)
Q Consensus 147 v~~lafs~~-~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g-~~LasgS~D~tIkvWd~~~~g~ 224 (453)
|.++..+.+ .|--|..+ -+.++|..+++..+-.... ..........|.+|..+. ..|..|+..+-|.++|..+.-.
T Consensus 213 i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~ 290 (781)
T 3v9f_A 213 VRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNP-GNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQF 290 (781)
T ss_dssp EEEEEECTTCCEEEEETT-EEEEEETTTTEEEC------------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC--
T ss_pred eeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCC-CccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCee
Confidence 778887652 33345555 7899999888754322111 000001123578888764 3566677656677777654111
Q ss_pred ceEEe-------e---ecceecCce-EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc-EEeccccc--CCcceeeeeee
Q 046773 225 ETRTA-------H---FGSVMDDGV-LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE-VFVGGDLT--DHNTVMGWRML 290 (453)
Q Consensus 225 ~~~~~-------~---~~~v~~~~~-~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~-~~~g~~l~--~~~~v~~w~~l 290 (453)
..+.. . ...+..+.+ .+..+++|..| .|+.++-|..+|..++. ....+... .+. .+
T Consensus 291 ~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW----igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~------~l 360 (781)
T 3v9f_A 291 LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW----IGTWGGGINFISNAPPTFHTWSYSPTQMNES------SL 360 (781)
T ss_dssp -------CEEECBCSSTTSBSSSCEEEEEECSSCCEE----EEEBSSCEEEECSSCCSCEEEC----CCCSS------CC
T ss_pred eeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE----EEecCCeEEEeCCCCCcceeeccCccccccC------CC
Confidence 11110 0 011111222 36778888765 46777889999988766 21100000 000 01
Q ss_pred eeeccceeEEEEcCCc-eEEEEcCCcEEEEECCCCceEEEE-eeccCCeEEEEEEec-CCEEEEEeCCCccccCcceEEE
Q 046773 291 TEFTEFVGRVRVTSHE-SAVACTSSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVN-AEAYIVVENRELENQNRRLAIV 367 (453)
Q Consensus 291 ~~h~~~v~~v~~s~~~-~~vas~d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~-g~~l~s~s~dg~~~~~~~~i~I 367 (453)
....|.++..++++ +.+++.++-+.++|..++...... ........|.++..+ ...+-.++.++ -+.+
T Consensus 361 --~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~-------Gl~~ 431 (781)
T 3v9f_A 361 --SNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLG-------NISY 431 (781)
T ss_dssp --SSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTE-------EEEE
T ss_pred --CCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccC-------CEEE
Confidence 12458888888654 566666677889998865322111 001112345666554 23455566544 4455
Q ss_pred EEcCCCeeEEEEEe---cCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEeccc-----CCceEEEEe--cCCCE
Q 046773 368 RRVDTFEEVCRFSL---RADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRER-----IGEEVIAFV--GDDRH 437 (453)
Q Consensus 368 w~~~tg~~v~~l~~---~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~gh-----~~~~V~a~s--~d~~~ 437 (453)
++..+++. ..+.. ....+..+....++...+ ++.+-|.++|..+++........ ... |.++. ++|++
T Consensus 432 ~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~~d~~g~l 508 (781)
T 3v9f_A 432 YNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWI-GTHAGVFVIDLASKKVIHHYDTSNSQLLENF-VRSIAQDSEGRF 508 (781)
T ss_dssp ECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEE-EETTEEEEEESSSSSCCEEECTTTSSCSCSC-EEEEEECTTCCE
T ss_pred EcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEE-EECCceEEEeCCCCeEEecccCcccccccce-eEEEEEcCCCCE
Confidence 55555532 22211 123466665555554444 44456888999887654332211 234 66554 56666
Q ss_pred EEEEeCCcEEEEec
Q 046773 438 VAASCGTNIHLWDF 451 (453)
Q Consensus 438 lasg~D~~IklWDl 451 (453)
.++..++.+..+|.
T Consensus 509 Wigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 509 WIGTFGGGVGIYTP 522 (781)
T ss_dssp EEEESSSCEEEECT
T ss_pred EEEEcCCCEEEEeC
Confidence 55444333545553
No 270
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=93.87 E-value=0.0045 Score=60.17 Aligned_cols=45 Identities=20% Similarity=0.457 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhccCCchhHHHhh
Q 046773 46 VEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLT 94 (453)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l~~~~~~w~~~~ 94 (453)
++.||.|+..+|+.||+ .++++.+++||++|+.+..+..+|+++-
T Consensus 9 ~~~LP~eil~~If~~L~----~~d~~~~~~vc~~W~~~~~~~~~~~~l~ 53 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLC----LPELLKVSGVCKRWYRLASDESLWQTLD 53 (336)
T ss_dssp SSSSCHHHHHHHHTTSC----HHHHHHTTSSCHHHHHHHTCSTTSSEEE
T ss_pred hhhCCHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHhcCchhheeec
Confidence 48899999999999997 5589999999999999998888886543
No 271
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.73 E-value=9 Score=41.34 Aligned_cols=280 Identities=8% Similarity=-0.001 Sum_probs=145.5
Q ss_pred EEEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecC------CCCCccccccceEEEEEEcCC-eEEEEeCCCCEEEEE
Q 046773 147 CRCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRP------QHSDRLGQFSRAVSGIIITDS-QLIFATLDGDIHVAV 218 (453)
Q Consensus 147 v~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~g------h~~~~~~~~s~~V~~i~f~g~-~LasgS~D~tIkvWd 218 (453)
|+++..+. ..|--|+..+-|.++|..+++....... ......+.....|.+|..|.+ .|-.|+.++-|..++
T Consensus 260 i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~ 339 (781)
T 3v9f_A 260 IFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFIS 339 (781)
T ss_dssp EEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEEC
T ss_pred EEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeC
Confidence 78888865 4666677767888999988864322110 000000111236888888743 466677777777777
Q ss_pred eecCCcceEEee-----ecceecCc-eEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeee
Q 046773 219 IDDVANETRTAH-----FGSVMDDG-VLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTE 292 (453)
Q Consensus 219 ~~~~g~~~~~~~-----~~~v~~~~-~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~ 292 (453)
........+... ......+. ..+..+++|+.| .|+.++-|.++|..+++... ...+. ..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW----igt~~~Gl~~~~~~~~~~~~---~~~~~--------~~ 404 (781)
T 3v9f_A 340 NAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW----IGTDGGGINVFENGKRVAIY---NKENR--------EL 404 (781)
T ss_dssp SSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE----EEEBSSCEEEEETTEEEEEC---C-------------C
T ss_pred CCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE----EEeCCCcEEEEECCCCeEEE---ccCCC--------CC
Confidence 654111221100 01111111 136677778754 56767779999987765211 00000 01
Q ss_pred eccceeEEEEcCCc-eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecC-CEEEEEeCCCccccCcceEEEEEc
Q 046773 293 FTEFVGRVRVTSHE-SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNA-EAYIVVENRELENQNRRLAIVRRV 370 (453)
Q Consensus 293 h~~~v~~v~~s~~~-~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g-~~l~s~s~dg~~~~~~~~i~Iw~~ 370 (453)
....|.++..++++ +.+++.++.+..+|.++++.............|.++..+. ..+-.++..| +.+++.
T Consensus 405 ~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~G--------l~~~~~ 476 (781)
T 3v9f_A 405 LSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAG--------VFVIDL 476 (781)
T ss_dssp CCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETTE--------EEEEES
T ss_pred CCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECCc--------eEEEeC
Confidence 12567888877554 5666666678899998865322111001123466665553 3455555533 455666
Q ss_pred CCCeeEEEEEec-----CCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEec--cc-CCceEEEEe--cCCCEEEE
Q 046773 371 DTFEEVCRFSLR-----ADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFR--ER-IGEEVIAFV--GDDRHVAA 440 (453)
Q Consensus 371 ~tg~~v~~l~~~-----~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~--gh-~~~~V~a~s--~d~~~las 440 (453)
.+++........ ...+..+....++...+++.++-|..+|..+++...-.. +- ... |.++. ++++..++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLA 555 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEE
T ss_pred CCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEE
Confidence 655432211111 234666666666666665554446779988776533211 11 233 66654 56665554
Q ss_pred EeCCcEEEEe
Q 046773 441 SCGTNIHLWD 450 (453)
Q Consensus 441 g~D~~IklWD 450 (453)
..+|.|..+|
T Consensus 556 T~~Glv~~~d 565 (781)
T 3v9f_A 556 TGEGLVCFPS 565 (781)
T ss_dssp ETTEEEEESC
T ss_pred ECCCceEEEC
Confidence 3444325554
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.82 E-value=12 Score=37.76 Aligned_cols=145 Identities=15% Similarity=0.031 Sum_probs=75.2
Q ss_pred EEEEeCC---CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCce-EEEEcCC-
Q 046773 240 LIDFTGC---SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-AVACTSS- 314 (453)
Q Consensus 240 ~v~Fs~d---g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-~vas~d~- 314 (453)
-|+++|+ |+ |+.+...+.|+.+|.++++... +..-....+.|++++++. +++...+
T Consensus 143 gvavd~~s~~g~----Lyv~D~~~~I~~id~~~g~v~~---------------~~~~~~~P~giavd~dG~lyVad~~~~ 203 (433)
T 4hw6_A 143 RMMFDPNSNYDD----LYWVGQRDAFRHVDFVNQYVDI---------------KTTNIGQCADVNFTLNGDMVVVDDQSS 203 (433)
T ss_dssp EEEECTTTTTCE----EEEECBTSCEEEEETTTTEEEE---------------ECCCCSCEEEEEECTTCCEEEEECCSC
T ss_pred eEEEccccCCCE----EEEEeCCCCEEEEECCCCEEEE---------------eecCCCCccEEEECCCCCEEEEcCCCC
Confidence 4889985 55 3444434899999998887321 111123467788987664 4444321
Q ss_pred ---c-EEEEECCCCce-EEEE-eeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEE-EecC-CC
Q 046773 315 ---R-VITFDLRNQGM-VLGE-RGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRF-SLRA-DR 385 (453)
Q Consensus 315 ---t-IrlWDl~t~~~-~~~~-~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l-~~~~-~~ 385 (453)
. +...+...+.. ...+ .+.. -.-.++++ ++..+++-...+ .|...+.++++.+..+ .... ..
T Consensus 204 ~~~~gv~~~~~~~~~~~~~~~~~~~~--P~giavd~~~G~lyv~d~~~~-------~V~~~d~~~g~~~~~~~~~~~~~~ 274 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTERLSLCNARG--AKTCAVHPQNGKIYYTRYHHA-------MISSYDPATGTLTEEEVMMDTKGS 274 (433)
T ss_dssp TTSEEEEEECGGGTTCCEEEEEECSS--BCCCEECTTTCCEEECBTTCS-------EEEEECTTTCCEEEEEEECSCCSS
T ss_pred cccceEEEEECCCCeeccccccccCC--CCEEEEeCCCCeEEEEECCCC-------EEEEEECCCCeEEEEEeccCCCCC
Confidence 1 22223322111 0011 1100 01135666 455555433344 5666666666542333 2211 12
Q ss_pred eeEEEEeeCCCeEEEEeC--CeEEEEECC
Q 046773 386 NVNVMGCMNQGYALMCVE--GVIRVWEVE 412 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s~--~tIrlWD~~ 412 (453)
-..++++++++++..+.. +.|+..|..
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 345888888886655543 899998765
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=90.76 E-value=14 Score=36.49 Aligned_cols=234 Identities=8% Similarity=-0.056 Sum_probs=118.6
Q ss_pred EEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEEEeecCC
Q 046773 148 RCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVAVIDDVA 223 (453)
Q Consensus 148 ~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvWd~~~~g 223 (453)
.|.+.++ .+|.-+ ....|+..|+.+++....+.+.. ...+++++ +..|... ...+.|+.++.++..
T Consensus 80 ~C~~~~~~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~---------~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 80 SCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLNNLE---------NAIALDFHHRRELVFWSDVTLDRILRANLNGSN 149 (386)
T ss_dssp CEEECSSCCEEEEE-CBSCEEEECTTSCCCEEEECSCS---------CEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred eECCccccceeEee-cCccceeeccCCCcEEEEecCCC---------ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC
Confidence 3555554 344433 34679999998876554443321 35668876 3455544 445667777766511
Q ss_pred cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 224 NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 224 ~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
...+ ....+ ....-|++++.+..+ .++-+..+.|.+.++.... .+. .......+.++
T Consensus 150 ~~~~--~~~~~-~~p~glavd~~~g~l--Y~~d~~~~~I~~~~~dg~~~~~l~----------------~~~l~~P~gia 208 (386)
T 3v65_B 150 VEEV--VSTGL-ESPGGLAVDWVHDKL--YWTDSGTSRIEVANLDGAHRKVLL----------------WQSLEKPRAIA 208 (386)
T ss_dssp EEEE--ECSSC-SCCCCEEEETTTTEE--EEEETTTTEEEECBTTSCSCEEEE----------------CSSCSCEEEEE
T ss_pred cEEE--EeCCC-CCccEEEEEeCCCeE--EEEcCCCCeEEEEeCCCCceEEee----------------cCCCCCCcEEE
Confidence 1111 11111 011137888765541 3444566788888886543 211 01112346788
Q ss_pred EcCC-c-eEEEEc-C-CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeE
Q 046773 302 VTSH-E-SAVACT-S-SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEV 376 (453)
Q Consensus 302 ~s~~-~-~~vas~-d-~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v 376 (453)
++|. + ++.+.. . ..|...|+...............-.-.+++++++.+..+. ..+ .|...+.+.....
T Consensus 209 vdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~-------~I~~~d~dG~~~~ 281 (386)
T 3v65_B 209 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH-------VIERANLDGSHRK 281 (386)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTT-------EEEEECTTSCSCE
T ss_pred EEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCC-------EEEEEeCCCCeeE
Confidence 8863 3 344432 3 5688888874322111111111112245676666655543 333 5666666533222
Q ss_pred EEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEec
Q 046773 377 CRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 377 ~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~ 421 (453)
..+......-..++. +.+.+..+. . +.|...|..+|+.+.++.
T Consensus 282 ~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 282 AVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEECCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 122211122334444 344554443 3 889889988887777664
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.55 E-value=15 Score=36.81 Aligned_cols=150 Identities=8% Similarity=-0.004 Sum_probs=78.6
Q ss_pred eeEEEEcCC--c-eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCC
Q 046773 297 VGRVRVTSH--E-SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTF 373 (453)
Q Consensus 297 v~~v~~s~~--~-~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg 373 (453)
...|+++|. + +.++.....|+.+|++++.. ..+......-.-.+++++++.+..+...+. ... ...++....+
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~--~~~-~~v~~~~~~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKVRTICWTHEADSMIITNDQNN--NDR-PNNYILTRES 214 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCEEEEEECTTSSEEEEEECCSC--TTS-EEEEEEEGGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCcceEEEeCCCCEEEEEeCCCC--ccc-ceEEEEeCCC
Confidence 356788862 3 44544447899999987643 332222222233567777885555544220 000 1122322222
Q ss_pred ee--EEEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeE--EEEecccCCceEEEEecCCCEE-EEE-eCCc
Q 046773 374 EE--VCRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEY--MYSFRERIGEEVIAFVGDDRHV-AAS-CGTN 445 (453)
Q Consensus 374 ~~--v~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~--l~tL~gh~~~~V~a~s~d~~~l-asg-~D~~ 445 (453)
.. ...+.. ......++.+++.+++..+. . +.|..+|..+++. +..+.+.....=.+|+|++++| ++- ..+.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 11 122221 11234566777455555544 3 8999999988765 2222222122112788999955 444 6778
Q ss_pred EEEEec
Q 046773 446 IHLWDF 451 (453)
Q Consensus 446 IklWDl 451 (453)
|..+|.
T Consensus 294 I~~~~~ 299 (430)
T 3tc9_A 294 ILRSDY 299 (430)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 888764
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.05 E-value=13 Score=34.99 Aligned_cols=215 Identities=10% Similarity=-0.034 Sum_probs=104.7
Q ss_pred EEEEEEc--CCeEEEEeCCCCEEEEEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCCC-eEEEeeCCCCc
Q 046773 195 VSGIIIT--DSQLIFATLDGDIHVAVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGR-AFHIWDRQAEE 271 (453)
Q Consensus 195 V~~i~f~--g~~LasgS~D~tIkvWd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~-tIrvWD~~tg~ 271 (453)
..+++++ ++.+++-...+.|..+|.++ ...... ..+. ....++|+++|+.+ ++....++ .|-.+|..+|+
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~-~~~~---~p~gia~~~dG~l~--vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHA-TVEG---KVSGLAFTSNGDLV--ATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEE-ECSS---EEEEEEECTTSCEE--EEEECTTSCEEEEEECTTSC
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEE-eCCC---CceeEEEcCCCcEE--EEeccCCcceEEEEcCCCCe
Confidence 3456765 45445544677777777554 211111 1111 11248899999852 22222232 45556777877
Q ss_pred EEecccccCCcceeeeeeeeeeccceeEEEEcCCce-EEEE-cCCcEEEEECCCCc-eEEEEee-------ccCCeEEEE
Q 046773 272 VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHES-AVAC-TSSRVITFDLRNQG-MVLGERG-------YGRGLYVTS 341 (453)
Q Consensus 272 ~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~~-~vas-~d~tIrlWDl~t~~-~~~~~~g-------~~~~~~v~~ 341 (453)
...-.. +.. ....+.+.+.+++. +++. ..+.|...|..++. .+....+ ...-.....
T Consensus 107 ~~~~~~------------~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~png 173 (306)
T 2p4o_A 107 VETLLT------------LPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG 173 (306)
T ss_dssp EEEEEE------------CTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE
T ss_pred EEEEEe------------CCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCC
Confidence 311000 000 01123344444444 3333 25778888887642 1211100 001012244
Q ss_pred EEecCCEEEEE-eCCCccccCcceEEEEEcCC-Cee--EEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECCCCeE
Q 046773 342 VDVNAEAYIVV-ENRELENQNRRLAIVRRVDT-FEE--VCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVEGGEY 416 (453)
Q Consensus 342 ~~~~g~~l~s~-s~dg~~~~~~~~i~Iw~~~t-g~~--v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~ 416 (453)
++++++.+..+ +..+ .|.+++.+. ++. ...+.. ......++..+++...++... +.|.++|.. |+.
T Consensus 174 is~dg~~lyv~d~~~~-------~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 174 LKRFGNFLYVSNTEKM-------LLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEEETTEEEEEETTTT-------EEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred cCcCCCEEEEEeCCCC-------EEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 58888765444 3444 777788764 321 122211 112244667777765454444 889999975 765
Q ss_pred EE--EecccCCceEE--EEe---cCCCEEE
Q 046773 417 MY--SFRERIGEEVI--AFV---GDDRHVA 439 (453)
Q Consensus 417 l~--tL~gh~~~~V~--a~s---~d~~~la 439 (453)
.. .+...... .. +|. ||+++|.
T Consensus 245 ~~~~~~~~~~~~-p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 245 TIIAQAEQGVIG-STAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EEEECGGGTCTT-EEEEEECCSTTTTTEEE
T ss_pred EEEeecccccCC-ceEEEEecccCCCCEEE
Confidence 33 33322233 44 566 7877664
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=89.93 E-value=14 Score=37.05 Aligned_cols=145 Identities=15% Similarity=0.059 Sum_probs=78.6
Q ss_pred EEEEeC-CCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCCc--eEEEEcC-C-
Q 046773 240 LIDFTG-CSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSHE--SAVACTS-S- 314 (453)
Q Consensus 240 ~v~Fs~-dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~~--~~vas~d-~- 314 (453)
.|+|+| ++.. |+.....+.|+.+|+++++... +..-......|+|++++ ++++... +
T Consensus 141 ~lavdp~~~g~---Lyv~d~~~~I~~id~~~~~v~~---------------~~~~~~~P~~ia~d~~G~~lyvad~~~~~ 202 (430)
T 3tc9_A 141 WLSFDPKNHNH---LYLVGEQHPTRLIDFEKEYVST---------------VYSGLSKVRTICWTHEADSMIITNDQNNN 202 (430)
T ss_dssp EEEEETTEEEE---EEEEEBTEEEEEEETTTTEEEE---------------EECCCSCEEEEEECTTSSEEEEEECCSCT
T ss_pred EEEECCCCCCe---EEEEeCCCcEEEEECCCCEEEE---------------EecCCCCcceEEEeCCCCEEEEEeCCCCc
Confidence 489998 3432 4554444889999998876211 11112345678898765 4454432 1
Q ss_pred --cEEEEECCCCceE--EEE--eeccCCeEEEEEEe-cCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecC-CCe
Q 046773 315 --RVITFDLRNQGMV--LGE--RGYGRGLYVTSVDV-NAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRA-DRN 386 (453)
Q Consensus 315 --tIrlWDl~t~~~~--~~~--~g~~~~~~v~~~~~-~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~-~~v 386 (453)
...+|-...+... ..+ ..+.+. .++++ ++..+++-...+ .|..++.++++....+.... .+-
T Consensus 203 ~~~~v~~~~~~g~~~~~~~l~~~~~p~g---iavdp~~g~lyv~d~~~~-------~V~~~~~~~~~~~~~~~~~~~~~P 272 (430)
T 3tc9_A 203 DRPNNYILTRESGFKVITELTKGQNCNG---AETHPINGELYFNSWNAG-------QVFRYDFTTQETTPLFTIQDSGWE 272 (430)
T ss_dssp TSEEEEEEEGGGTSCSEEEEEECSSCCC---EEECTTTCCEEEEETTTT-------EEEEEETTTTEEEEEEECSSSSCC
T ss_pred ccceEEEEeCCCceeeeeeeccCCCceE---EEEeCCCCEEEEEECCCC-------EEEEEECCCCcEEEEEEcCCCCcc
Confidence 1223333333221 111 112222 45777 555555544445 67777777665322222221 235
Q ss_pred eEEEEeeCCCeEEEEeC--CeEEEEECC
Q 046773 387 VNVMGCMNQGYALMCVE--GVIRVWEVE 412 (453)
Q Consensus 387 ~~~~~~~~~~~lls~s~--~tIrlWD~~ 412 (453)
+.++++++++++..+.. +.|..+|..
T Consensus 273 ~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 273 FHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 67899999986665543 889887764
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.97 E-value=18 Score=35.41 Aligned_cols=154 Identities=10% Similarity=0.137 Sum_probs=86.7
Q ss_pred EEEeCC-CceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeee-ccceeEEEE---cCCceEEE-Ec--
Q 046773 241 IDFTGC-SRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEF-TEFVGRVRV---TSHESAVA-CT-- 312 (453)
Q Consensus 241 v~Fs~d-g~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h-~~~v~~v~~---s~~~~~va-s~-- 312 (453)
++|++. +++ ++|.-..++|-.||..++....- ...+.. ..+- ...+..|.+ ++++.+.+ +.
T Consensus 18 ~~wd~~~g~~---~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s-------~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 18 TIYDRTRQVF---YQSNLYKGRIEVYNPKTQSHFNV-VIDGAS-------SNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp EEEETTTTEE---EEEETTTTEEEEECTTTCCEEEE-CCTTTC-------CSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred ccCcCCCCEE---EEEeccCCEEEEEcCCCCeEEEE-ecCCcc-------ccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 567663 443 33434789999999986652210 011000 0000 012357888 56664443 32
Q ss_pred ------------CCcEEEEECC---CCceEEEE--eeccC-----------CeEEEEEEecCCEEEEEeCC-CccccCcc
Q 046773 313 ------------SSRVITFDLR---NQGMVLGE--RGYGR-----------GLYVTSVDVNAEAYIVVENR-ELENQNRR 363 (453)
Q Consensus 313 ------------d~tIrlWDl~---t~~~~~~~--~g~~~-----------~~~v~~~~~~g~~l~s~s~d-g~~~~~~~ 363 (453)
+..+..+|+. |++.+... ..... ...-.+++++|+.+++.+.. +
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~------- 159 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP------- 159 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC-------
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC-------
Confidence 3458889999 77654322 11111 12335678889999998877 6
Q ss_pred eEEEEEcCC-CeeEEEEEecC-C-----CeeEEEEeeCCCeEEEEeC-CeEEEEECCCC
Q 046773 364 LAIVRRVDT-FEEVCRFSLRA-D-----RNVNVMGCMNQGYALMCVE-GVIRVWEVEGG 414 (453)
Q Consensus 364 ~i~Iw~~~t-g~~v~~l~~~~-~-----~v~~~~~~~~~~~lls~s~-~tIrlWD~~tG 414 (453)
.||-++. |+.+..+.... . ....+++.|++..|++... +.+.-.|+.+-
T Consensus 160 --~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 160 --AIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp --EEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred --eEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 4555442 44444332222 1 1347888999888887655 88888898853
No 278
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=87.81 E-value=0.16 Score=53.08 Aligned_cols=38 Identities=13% Similarity=0.240 Sum_probs=27.9
Q ss_pred cchHHHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhc
Q 046773 43 EPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAV 83 (453)
Q Consensus 43 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l 83 (453)
.|.++.||.|+..+|++||. ..+++..+++||++|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~---~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQ---LDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCC---CHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcC---CchhHHHHHHHHHHHHHh
Confidence 47789999999999999986 246889999999999988
No 279
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.39 E-value=0.79 Score=49.79 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=33.1
Q ss_pred EEEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEec
Q 046773 146 TCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFR 181 (453)
Q Consensus 146 ~v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~ 181 (453)
.|.|+.++..+|++=+.|+++|+||+.|++|+.+..
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 378999999999999999999999999999998864
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=87.01 E-value=19 Score=36.18 Aligned_cols=149 Identities=10% Similarity=-0.011 Sum_probs=76.5
Q ss_pred eeEEEEcCC---c-eEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCC
Q 046773 297 VGRVRVTSH---E-SAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDT 372 (453)
Q Consensus 297 v~~v~~s~~---~-~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~t 372 (453)
...|+++++ + +.++.....|+.+|++++.. .+..+....-.-.+++++|+.+++ ...+. ..+...++....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v-~~~~~~~~~P~giavd~dG~lyVa-d~~~~---~~~~gv~~~~~~ 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV-DIKTTNIGQCADVNFTLNGDMVVV-DDQSS---DTNTGIYLFTRA 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE-EEECCCCSCEEEEEECTTCCEEEE-ECCSC---TTSEEEEEECGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEE-EEeecCCCCccEEEECCCCCEEEE-cCCCC---cccceEEEEECC
Confidence 356888873 4 44543337899999988653 333222222334567788884444 32210 001112222211
Q ss_pred Cee--EEEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEeccc--CCce-EEEEecCCCEE-EEE-eC
Q 046773 373 FEE--VCRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFRER--IGEE-VIAFVGDDRHV-AAS-CG 443 (453)
Q Consensus 373 g~~--v~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~gh--~~~~-V~a~s~d~~~l-asg-~D 443 (453)
+.. ...+. ....-..++..++.+.+..+. . +.|+.+|..+|+....+... .... =.+|+|++++| ++- ..
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 110 01111 112223456666445555443 3 88999999988763333211 1111 13788999855 444 66
Q ss_pred CcEEEEec
Q 046773 444 TNIHLWDF 451 (453)
Q Consensus 444 ~~IklWDl 451 (453)
+.|+.+|+
T Consensus 295 ~~I~~~~~ 302 (433)
T 4hw6_A 295 HCIYRVDY 302 (433)
T ss_dssp TEEEEEEB
T ss_pred CEEEEEeC
Confidence 78888774
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.72 E-value=26 Score=34.62 Aligned_cols=88 Identities=13% Similarity=0.167 Sum_probs=53.0
Q ss_pred eEEEEEc---C----CCeeEEEEEecCCCeeEEEEeeCCCeEEEEeC-CeEEEEECC-----CCeEEEEec-ccCCceEE
Q 046773 364 LAIVRRV---D----TFEEVCRFSLRADRNVNVMGCMNQGYALMCVE-GVIRVWEVE-----GGEYMYSFR-ERIGEEVI 429 (453)
Q Consensus 364 ~i~Iw~~---~----tg~~v~~l~~~~~~v~~~~~~~~~~~lls~s~-~tIrlWD~~-----tG~~l~tL~-gh~~~~V~ 429 (453)
.+..|++ . +++.+++|.+.+ .+..++..+..+++..+-. .-|...|.+ +++.+..+. ++-...+.
T Consensus 154 ~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvE 232 (355)
T 3amr_A 154 EFEQYELKADKNGYISGKKVRAFKMNS-QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIE 232 (355)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECSS-CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEE
T ss_pred eEEEEEEEeCCCCcccceEEEEecCCC-CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcc
Confidence 6666665 2 335677777643 4566666666677777765 336556754 456666552 33221144
Q ss_pred --EE--ecCCC--EEEEE-eCCcEEEEecC
Q 046773 430 --AF--VGDDR--HVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 430 --a~--s~d~~--~lasg-~D~~IklWDl~ 452 (453)
++ .++++ .|||+ .+++..|+|..
T Consensus 233 GLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 233 GLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 34 35655 45677 78899999874
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.49 E-value=24 Score=34.95 Aligned_cols=138 Identities=12% Similarity=0.206 Sum_probs=72.0
Q ss_pred ceEEEEcC-CcEEEEECCCCceEEEEe-eccCCeE-EEEEEecCCE--EEEEeCCCccccCcceEEEEEcC--CCeeEEE
Q 046773 306 ESAVACTS-SRVITFDLRNQGMVLGER-GYGRGLY-VTSVDVNAEA--YIVVENRELENQNRRLAIVRRVD--TFEEVCR 378 (453)
Q Consensus 306 ~~~vas~d-~tIrlWDl~t~~~~~~~~-g~~~~~~-v~~~~~~g~~--l~s~s~dg~~~~~~~~i~Iw~~~--tg~~v~~ 378 (453)
+++++... +.+.++|+ +|+.+..+. +..+++- ...|...|+. ++.++..+.. .++++|++++ +++ +..
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~---~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEG---KNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTT---CCEEEEEEECTTTCC-EEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCC---CCeEEEEEECCCCCc-eee
Confidence 35666544 57999999 677665553 2222222 1234444544 3444432100 1289999774 332 444
Q ss_pred EEec--C-----CCeeEEEE--eeCCC--eEEEEeC-CeEEEEEC-------CCCeEEEEecccCCceEEEE--ecCCCE
Q 046773 379 FSLR--A-----DRNVNVMG--CMNQG--YALMCVE-GVIRVWEV-------EGGEYMYSFRERIGEEVIAF--VGDDRH 437 (453)
Q Consensus 379 l~~~--~-----~~v~~~~~--~~~~~--~lls~s~-~tIrlWD~-------~tG~~l~tL~gh~~~~V~a~--s~d~~~ 437 (453)
+..- | .....++. ++..+ +++.... +.+..|++ .+++.+++|.-.. . +..+ .+...+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q-~EgcvvDd~~g~ 193 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-Q-TEGMAADDEYGR 193 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-C-EEEEEEETTTTE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-C-cceEEEcCCCCe
Confidence 4210 1 22344444 34333 3444444 88888888 3457777775432 2 4433 355567
Q ss_pred EEEE-eCCcEEEEecC
Q 046773 438 VAAS-CGTNIHLWDFG 452 (453)
Q Consensus 438 lasg-~D~~IklWDl~ 452 (453)
|-.+ +|.. ||.+.
T Consensus 194 Lyv~eEd~G--Iw~~d 207 (355)
T 3amr_A 194 LYIAEEDEA--IWKFS 207 (355)
T ss_dssp EEEEETTTE--EEEEE
T ss_pred EEEecccce--EEEEe
Confidence 7777 6644 66554
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.64 E-value=46 Score=36.43 Aligned_cols=240 Identities=8% Similarity=-0.057 Sum_probs=119.0
Q ss_pred EEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcC--CeEEEE-eCCCCEEEEEeecCC
Q 046773 148 RCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITD--SQLIFA-TLDGDIHVAVIDDVA 223 (453)
Q Consensus 148 ~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g--~~Lasg-S~D~tIkvWd~~~~g 223 (453)
.|.+.+. .+|.-. ....|+.-++...+....+.+. . .+.+|+|+. .+|... ...+.|+.++++...
T Consensus 388 ~C~~~~~~p~Ll~a-n~~~Ir~i~l~~~~~~~l~~~~-~--------~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~ 457 (791)
T 3m0c_C 388 ACKAVGSIAYLFFT-NRHEVRKMTLDRSEYTSLIPNL-R--------NVVALDTEVASNRIYWSDLSQRMICSTQLDRAH 457 (791)
T ss_dssp CCEETTSCCEEEEE-CBSSEEEECTTSCCCEEEECSC-S--------SEEEEEEETTTTEEEEEETTTTEEEEEEC----
T ss_pred eeeecccccccccc-cccceeEeeccCCcceeeecCC-C--------ceEEEeecccCCeeEEeeccceeEEEEeccCCC
Confidence 3555554 244333 3467888888877654444331 1 356688863 455444 445667777766411
Q ss_pred c--ceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 224 N--ETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 224 ~--~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
. .........+ .....|++++.++.+ .++-+..+.|.+-|+....... .+.........|+
T Consensus 458 ~~~~~~~vi~~~l-~~P~GLAvD~~~~~L--Y~tD~~~~~I~v~~ldG~~~~~--------------l~~~~l~~P~gIa 520 (791)
T 3m0c_C 458 GVSSYDTVISRDI-QAPDGLAVDWIHSNI--YWTDSVLGTVSVADTKGVKRKT--------------LFRENGSKPRAIV 520 (791)
T ss_dssp ----CEEEECSSC-SCCCEEEEETTTTEE--EEEETTTTEEEEEETTSSSEEE--------------EEECTTCCEEEEE
T ss_pred CCcceeEEEecCC-CCcceeeeeecCCcE--EEEecCCCeEEEEeCCCCeEEE--------------EEeCCCCCcceEE
Confidence 0 0111111011 111247888887642 3455667899999987654210 0011112356788
Q ss_pred EcCC-c-eEEEEc-C-CcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeE
Q 046773 302 VTSH-E-SAVACT-S-SRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEV 376 (453)
Q Consensus 302 ~s~~-~-~~vas~-d-~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v 376 (453)
++|. + ++.+.. . ..|..-++.... ...+ ......-.-.+|++....|..+.... ..|.+.+.+.....
T Consensus 521 VDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~------~~I~~~d~dG~~~~ 593 (791)
T 3m0c_C 521 VDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKL------HSISSIDVNGGNRK 593 (791)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTT------TEEEEEETTSCSCE
T ss_pred EecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeEEEEeCCC------CcEEEEecCCCceE
Confidence 8874 3 555543 2 578888887433 2222 11111122245665566665553322 15555566533222
Q ss_pred EEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEEECCCCeEEEEec
Q 046773 377 CRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 377 ~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~tG~~l~tL~ 421 (453)
..+.........+.....+++|..+.. +.|..-|..+|+.+.++.
T Consensus 594 ~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 594 TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 222221111122233334556654443 788888888887666553
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=83.78 E-value=55 Score=35.80 Aligned_cols=199 Identities=10% Similarity=0.014 Sum_probs=99.1
Q ss_pred EEEEEecC---CEEEEEeCCCcEEEEECCCC----eEEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEE
Q 046773 147 CRCLTLSD---LYLACGFADGAVRLFDLTTR----LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHV 216 (453)
Q Consensus 147 v~~lafs~---~~LaSGS~D~TIrlWD~~tg----~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkv 216 (453)
+..|+|+. .+.++-...+.|+.+++... .....+.... ....+|++| +..|+.+ +..++|.+
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l--------~~P~GLAvD~~~~~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--------QAPDGLAVDWIHSNIYWTDSVLGTVSV 497 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--------SCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC--------CCcceeeeeecCCcEEEEecCCCeEEE
Confidence 56788875 35667677788999998753 2222222111 123457776 5555544 45677877
Q ss_pred EEeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEee-CC-CeEEEeeCCCCcEEecccccCCcceeeeeeeeeec
Q 046773 217 AVIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGL-AG-RAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFT 294 (453)
Q Consensus 217 Wd~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS-~D-~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~ 294 (453)
-+++.....++. ...+ .....|+++|.+.+ |+-.. .. ..|.+-++....... .+..--
T Consensus 498 ~~ldG~~~~~l~--~~~l-~~P~gIaVDp~~g~---LYwtD~g~~~~I~~~~~dG~~~~~--------------lv~~~l 557 (791)
T 3m0c_C 498 ADTKGVKRKTLF--RENG-SKPRAIVVDPVHGF---MYWTDWGTPAKIKKGGLNGVDIYS--------------LVTENI 557 (791)
T ss_dssp EETTSSSEEEEE--ECTT-CCEEEEEEETTTTE---EEEEECSSSCEEEEEETTSCCEEE--------------EECSSC
T ss_pred EeCCCCeEEEEE--eCCC-CCcceEEEecCCCC---EEEecCCCCCeEEEEecCCCceEE--------------EEeCCC
Confidence 777641112221 1111 11224889987554 33322 22 678888886543210 001111
Q ss_pred cceeEEEEcCC--ceEEEEcC-CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC
Q 046773 295 EFVGRVRVTSH--ESAVACTS-SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD 371 (453)
Q Consensus 295 ~~v~~v~~s~~--~~~vas~d-~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~ 371 (453)
.+.+.|++++. .+.++-.. ..|...|+..............-....++++.++.|..+.... ..|..-+..
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~------~~I~~~dk~ 631 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN------EAIFSANRL 631 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT------TEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCC------CEEEEEeCC
Confidence 35677888843 35566443 5799999875432221222111111245665666655543322 144444555
Q ss_pred CCeeEEEE
Q 046773 372 TFEEVCRF 379 (453)
Q Consensus 372 tg~~v~~l 379 (453)
+|+.+..+
T Consensus 632 tG~~~~~l 639 (791)
T 3m0c_C 632 TGSDVNLL 639 (791)
T ss_dssp TCCCCEEE
T ss_pred CCcceEEe
Confidence 66555444
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.92 E-value=6.8 Score=42.27 Aligned_cols=222 Identities=7% Similarity=-0.093 Sum_probs=104.8
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEEEeecC--CcceEEeeecceecC
Q 046773 163 DGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVAVIDDV--ANETRTAHFGSVMDD 237 (453)
Q Consensus 163 D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvWd~~~~--g~~~~~~~~~~v~~~ 237 (453)
.+.|+.-++.+.+....+.... .+.+|+++ +..|... ...+.|+..++++. +..........+ ..
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~---------~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-~~ 454 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLR---------NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QA 454 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCT---------TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC---
T ss_pred ccceEEEeCCCCcceeeeccCc---------ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC-CC
Confidence 4688888998877654443211 12346665 3455544 34567877776531 000000000000 01
Q ss_pred ceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC-c-eEEEEc-C-
Q 046773 238 GVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH-E-SAVACT-S- 313 (453)
Q Consensus 238 ~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~-~-~~vas~-d- 313 (453)
...|++++.++.+ +++-...++|.+.|+.......- +..-......++++|. + ++.+.. .
T Consensus 455 P~glavD~~~g~L--Y~tD~~~~~I~v~d~dg~~~~~l--------------~~~~~~~P~giavDp~~g~ly~td~~~~ 518 (699)
T 1n7d_A 455 PDGLAVDWIHSNI--YWTDSVLGTVSVADTKGVKRKTL--------------FREQGSKPRAIVVDPVHGFMYWTDWGTP 518 (699)
T ss_dssp CCCEECCCSSSBC--EECCTTTSCEEEEBSSSCCEEEE--------------CCCSSCCCCCEECCSSSSCCEECCCSSS
T ss_pred cceEEEEeeCCcE--EEEeccCCeEEEEecCCCceEEE--------------EeCCCCCcceEEEccCCCcEEEcccCCC
Confidence 1136777554431 33445567899999876542110 0000012345677753 2 444432 2
Q ss_pred CcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEE-eCCCccccCcceEEEEEcCCCeeEEEEEec-C--CCeeE
Q 046773 314 SRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVV-ENRELENQNRRLAIVRRVDTFEEVCRFSLR-A--DRNVN 388 (453)
Q Consensus 314 ~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~-s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~-~--~~v~~ 388 (453)
.+|...++..... ..+ ......-.-.+|+++++.|..+ +... .|.+.+.+... ...+... . .....
T Consensus 519 ~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~-------~I~~~d~dG~~-~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 519 AKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLH-------SISSIDVNGGN-RKTILEDEKRLAHPFS 589 (699)
T ss_dssp CCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCCEEEEETTTT-------EEEEECSSSSC-CEEECCCSSSCSSCCC
T ss_pred CeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCEEEEEecCCC-------eEEEEccCCCc-eEEEEecCCcCCCceE
Confidence 5677777753211 111 0000001114666665554443 3333 66666665322 2222211 1 11122
Q ss_pred EEEeeCCCeEEEEeC--CeEEEEECCCCeEEEEec
Q 046773 389 VMGCMNQGYALMCVE--GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 389 ~~~~~~~~~lls~s~--~tIrlWD~~tG~~l~tL~ 421 (453)
++. ++.++..+.. +.|...|..+|+.+.++.
T Consensus 590 lav--d~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 590 LAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CEE--ETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred eEE--ECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 333 3445554433 899999999998887774
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=82.70 E-value=38 Score=34.94 Aligned_cols=151 Identities=10% Similarity=0.019 Sum_probs=79.3
Q ss_pred eeEEEEcCC--c-eEEEEcC-CcEEEEECCCCceEEEE--eeccC--CeEEEEE-------EecCCEEEEEeCCCccccC
Q 046773 297 VGRVRVTSH--E-SAVACTS-SRVITFDLRNQGMVLGE--RGYGR--GLYVTSV-------DVNAEAYIVVENRELENQN 361 (453)
Q Consensus 297 v~~v~~s~~--~-~~vas~d-~tIrlWDl~t~~~~~~~--~g~~~--~~~v~~~-------~~~g~~l~s~s~dg~~~~~ 361 (453)
...|+|+|. . ++++... ..|++.|++++.. .++ .+... .-.-.+| +++++.++.+...+....+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v-~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML-SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE-EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE-EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 457889972 3 4555443 5799999998643 333 11111 1233556 7788866666544311011
Q ss_pred cceEEEEEcCC-CeeE-----EEEE-e-cCCCeeEEEEeeCCCeEEEEeC--CeEEEEECC-------CCeE--------
Q 046773 362 RRLAIVRRVDT-FEEV-----CRFS-L-RADRNVNVMGCMNQGYALMCVE--GVIRVWEVE-------GGEY-------- 416 (453)
Q Consensus 362 ~~~i~Iw~~~t-g~~v-----~~l~-~-~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~-------tG~~-------- 416 (453)
...+.+.+... ++-. ..+. + ++ ..++.+++.++|..+.. +.|..+|++ +++.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p---~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQC---NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCC---CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccCCCc---eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 11233333222 1110 1221 1 23 34566776677766554 889999998 6653
Q ss_pred ------EEEecccCCceEEEEecCCCEEEEE--eCCcEEEEec
Q 046773 417 ------MYSFRERIGEEVIAFVGDDRHVAAS--CGTNIHLWDF 451 (453)
Q Consensus 417 ------l~tL~gh~~~~V~a~s~d~~~lasg--~D~~IklWDl 451 (453)
+.++.......-.+|+|++++|..+ ..+.|+.+|+
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 2233221112123889999964333 5667777553
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.55 E-value=4.1 Score=43.98 Aligned_cols=197 Identities=11% Similarity=0.013 Sum_probs=93.9
Q ss_pred EEEEecC--C-EEEEEeCCCcEEEEECCCC---eEEEEecCCCCCccccccceEEEEEEc--CCeEE-EEeCCCCEEEEE
Q 046773 148 RCLTLSD--L-YLACGFADGAVRLFDLTTR---LHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLI-FATLDGDIHVAV 218 (453)
Q Consensus 148 ~~lafs~--~-~LaSGS~D~TIrlWD~~tg---~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~La-sgS~D~tIkvWd 218 (453)
..++|++ . +.++-...+.|+..++.+. ....++..... ....+|+++ +..|+ +-...++|.+.+
T Consensus 409 ~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-------~~P~glavD~~~g~LY~tD~~~~~I~v~d 481 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-------QAPDGLAVDWIHSNIYWTDSVLGTVSVAD 481 (699)
T ss_dssp CCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC---------CCCEECCCSSSBCEECCTTTSCEEEEB
T ss_pred EEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC-------CCcceEEEEeeCCcEEEEeccCCeEEEEe
Confidence 4567764 3 4555556789999998761 11111110000 012346765 34444 334567788877
Q ss_pred eecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeCC-CeEEEeeCCCCc--EEecccccCCcceeeeeeeeeecc
Q 046773 219 IDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAG-RAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTE 295 (453)
Q Consensus 219 ~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D-~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~ 295 (453)
.+..-..++ ...+. .....|+++|++.++ .++-... +.|.+.++.... .+. ..--.
T Consensus 482 ~dg~~~~~l-~~~~~--~~P~giavDp~~g~l--y~td~~~~~~I~~~~~dG~~~~~l~----------------~~~l~ 540 (699)
T 1n7d_A 482 TKGVKRKTL-FREQG--SKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGVDIYSLV----------------TENIQ 540 (699)
T ss_dssp SSSCCEEEE-CCCSS--CCCCCEECCSSSSCC--EECCCSSSCCEEBCCSSSCCCCEES----------------CSSCS
T ss_pred cCCCceEEE-EeCCC--CCcceEEEccCCCcE--EEcccCCCCeEEEEeCCCCCeeEEE----------------eCCCC
Confidence 664111111 11110 111237888876542 2232222 567777765332 221 00013
Q ss_pred ceeEEEEcCC--ceEEEEcC-CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcC
Q 046773 296 FVGRVRVTSH--ESAVACTS-SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVD 371 (453)
Q Consensus 296 ~v~~v~~s~~--~~~vas~d-~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~ 371 (453)
.-+.|+|+++ .+.++... .+|...|+....................++++++.++.+. ..+ .|...+..
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~-------~V~~~d~~ 613 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINE-------AIFSANRL 613 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTT-------CEEEEETT
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCC-------eEEEEEcc
Confidence 3467888864 35566543 6799999874322111111000001123444555554443 333 66666766
Q ss_pred CCeeEEEE
Q 046773 372 TFEEVCRF 379 (453)
Q Consensus 372 tg~~v~~l 379 (453)
+|+.+..+
T Consensus 614 ~G~~~~~i 621 (699)
T 1n7d_A 614 TGSDVNLL 621 (699)
T ss_dssp TEEEEECC
T ss_pred CCCceEEe
Confidence 77666555
No 288
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.72 E-value=39 Score=32.58 Aligned_cols=233 Identities=8% Similarity=-0.048 Sum_probs=117.7
Q ss_pred EEEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEEEeecCC
Q 046773 148 RCLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVAVIDDVA 223 (453)
Q Consensus 148 ~~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvWd~~~~g 223 (453)
.|.+.++ .+|.-+ ..+.|+..++.+.+....+.+.. ...+++++ +..|... ...+.|+.++.++..
T Consensus 37 ~C~~~~~~~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~---------~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 37 SCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLNNLE---------NAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp CEEESSSCCEEEEE-CBSCEEEECTTSCCEEEEECSCS---------CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cccccccCceeEee-cccceEEEeCCCCeeEEeecCCC---------ceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 4666554 344333 34568888988776554443321 34668876 3455544 446677777766511
Q ss_pred cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeeccceeEEE
Q 046773 224 NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTEFVGRVR 301 (453)
Q Consensus 224 ~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~ 301 (453)
...+. ..+ + .....+++++.+..+ .++-+..+.|.+.|+.... .+. .......+.++
T Consensus 107 ~~~~~-~~~-~-~~p~glavd~~~g~l--y~~d~~~~~I~~~~~dG~~~~~l~----------------~~~l~~P~~ia 165 (349)
T 3v64_C 107 VEEVV-STG-L-ESPGGLAVDWVHDKL--YWTDSGTSRIEVANLDGAHRKVLL----------------WQSLEKPRAIA 165 (349)
T ss_dssp CEEEE-CSS-C-SCCCEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEE----------------CTTCSCEEEEE
T ss_pred ceEEE-eCC-C-CCccEEEEecCCCeE--EEEcCCCCeEEEEcCCCCceEEEE----------------eCCCCCcceEE
Confidence 11111 111 1 111237888765531 3454566789999987543 211 01112346788
Q ss_pred EcC-Cc-eEEEEc-C-CcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCee
Q 046773 302 VTS-HE-SAVACT-S-SRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEE 375 (453)
Q Consensus 302 ~s~-~~-~~vas~-d-~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~ 375 (453)
++| ++ ++.+.. . ..|...|+..... ..+ ......-.-.+++++++.+..+. ..+ .|...+.+....
T Consensus 166 vdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~-------~I~~~~~dG~~~ 237 (349)
T 3v64_C 166 LHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHH-------VIERANLDGSHR 237 (349)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTT-------EEEEEETTSCSC
T ss_pred EecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCC-------EEEEEeCCCCce
Confidence 886 33 344432 3 5688888874322 221 11111112245666566655543 333 666667664322
Q ss_pred EEEEEecCCCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEec
Q 046773 376 VCRFSLRADRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 376 v~~l~~~~~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~ 421 (453)
...+......-..++. +.+.+..+. . +.|...|..+|+.+.++.
T Consensus 238 ~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 238 KAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeCCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 2112111122334444 344554443 3 788888877887666654
No 289
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.55 E-value=52 Score=32.15 Aligned_cols=186 Identities=10% Similarity=-0.040 Sum_probs=91.2
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcE--EecccccCCcceeeeeeeeeeccceeEEEEcC--CceEEEEc-CC
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEV--FVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HESAVACT-SS 314 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~--~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~~~vas~-d~ 314 (453)
.|+|++.++.+ +.+-...+.|..+++.++.. +.. .+. .....+++++ +.+..+.. ..
T Consensus 120 gl~~d~~~~~l--y~~D~~~~~I~r~~~~g~~~~~~~~---------------~~~-~~p~glavd~~~g~lY~~d~~~~ 181 (386)
T 3v65_B 120 ALDFHHRRELV--FWSDVTLDRILRANLNGSNVEEVVS---------------TGL-ESPGGLAVDWVHDKLYWTDSGTS 181 (386)
T ss_dssp EEEEETTTTEE--EEEETTTTEEEEEETTSCCEEEEEC---------------SSC-SCCCCEEEETTTTEEEEEETTTT
T ss_pred EEEEecCCCeE--EEEeCCCCcEEEEecCCCCcEEEEe---------------CCC-CCccEEEEEeCCCeEEEEcCCCC
Confidence 48898765541 34555678899999887652 110 011 1224567764 23445443 36
Q ss_pred cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEE-ecCCCeeEEEEee
Q 046773 315 RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFS-LRADRNVNVMGCM 393 (453)
Q Consensus 315 tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~-~~~~~v~~~~~~~ 393 (453)
+|.+.|+...............-.-.+++|.+..+..+.... ...|...+.+. .....+. ..-..-..+++++
T Consensus 182 ~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG-~~~~~~~~~~~~~PnGlavd~ 255 (386)
T 3v65_B 182 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-----TPRIEASSMDG-SGRRIIADTHLFWPNGLTIDY 255 (386)
T ss_dssp EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTS-CSCEEEECSSCSCEEEEEEEG
T ss_pred eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC-----CCEEEEEeCCC-CCcEEEEECCCCCeeeEEEeC
Confidence 788888875432211111111122245666555544432221 01444444443 2222222 1122346788887
Q ss_pred CCCeEEEEeC--CeEEEEECCCCeEEEEecccCCceEEEEe-cCCCEEEEE-eCCcEEEEe
Q 046773 394 NQGYALMCVE--GVIRVWEVEGGEYMYSFRERIGEEVIAFV-GDDRHVAAS-CGTNIHLWD 450 (453)
Q Consensus 394 ~~~~lls~s~--~tIrlWD~~tG~~l~tL~gh~~~~V~a~s-~d~~~lasg-~D~~IklWD 450 (453)
+++++..+.. +.|...|+........+...... -..+. ..+...++- ..+.|...|
T Consensus 256 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~-P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 256 AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH-PFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp GGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSS-EEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCC-ceEEEEECCEEEEeeCCCCeEEEEE
Confidence 7777765544 88999998643222222222222 22222 333344454 556666555
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=77.85 E-value=56 Score=32.15 Aligned_cols=236 Identities=8% Similarity=-0.057 Sum_probs=117.9
Q ss_pred EEEecC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEEe-CCCCEEEEEeecCC-
Q 046773 149 CLTLSD-LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFAT-LDGDIHVAVIDDVA- 223 (453)
Q Consensus 149 ~lafs~-~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~LasgS-~D~tIkvWd~~~~g- 223 (453)
|.+..+ .+|.-.. .+.|+.-|+.+.+....+.+. ..+.+|+|+ +..|.... ..+.|+.++.+...
T Consensus 77 C~~~~~~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~---------~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~ 146 (400)
T 3p5b_L 77 CKAVGSIAYLFFTN-RHEVRKMTLDRSEYTSLIPNL---------RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 146 (400)
T ss_dssp CCCSTTSCEEEEEE-TTEEEEECTTSCSCEEEECSC---------SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----
T ss_pred eeeccccceeEEec-cceeEEEccCCcceeEecccc---------CcceEEeeeeccCceEEEecCCCeEEEEEcccCCC
Confidence 444433 3444443 478999999877654444321 135678887 35565554 45667777765410
Q ss_pred -cceEEeeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEE
Q 046773 224 -NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRV 302 (453)
Q Consensus 224 -~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~ 302 (453)
..........+ ....-|++++.++.+ .++-+..+.|.+-|++.+.... .+..--.....+++
T Consensus 147 ~~~~~~~~~~~~-~~p~glavD~~~~~l--Y~~d~~~~~I~~~~~~g~~~~~--------------l~~~~~~~P~~iav 209 (400)
T 3p5b_L 147 VSSYDTVISRDI-QAPDGLAVDWIHSNI--YWTDSVLGTVSVADTKGVKRKT--------------LFRENGSKPRAIVV 209 (400)
T ss_dssp -CCCEEEECSSC-SCEEEEEEETTTTEE--EEEETTTTEEEEECTTTCSEEE--------------EEECSSCCEEEEEE
T ss_pred CCcceEEEeCCC-CCcccEEEEecCCce--EEEECCCCeEEEEeCCCCceEE--------------EEeCCCCCcceEEE
Confidence 00111111111 111237888754431 3344566789998887654210 00011123467888
Q ss_pred cCC-c-eEEEEcC--CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeC-CCccccCcceEEEEEcCCCeeEE
Q 046773 303 TSH-E-SAVACTS--SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVEN-RELENQNRRLAIVRRVDTFEEVC 377 (453)
Q Consensus 303 s~~-~-~~vas~d--~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~-dg~~~~~~~~i~Iw~~~tg~~v~ 377 (453)
+|. + ++.+... ..|...|+...............-.-.+++++++.|..+.. .. .|...+.+... ..
T Consensus 210 dp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~-------~I~~~d~dG~~-~~ 281 (400)
T 3p5b_L 210 DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH-------SISSIDVNGGN-RK 281 (400)
T ss_dssp ETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT-------EEEEEETTSCC-CE
T ss_pred ecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC-------EEEEEeCCCCc-cE
Confidence 873 3 4444322 57888888743221111111111222556666666655533 33 66666665432 23
Q ss_pred EEEec-C--CCeeEEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEec
Q 046773 378 RFSLR-A--DRNVNVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 378 ~l~~~-~--~~v~~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~ 421 (453)
.+... . ..-..++. +.+++..+. . +.|...|..+|+.+.++.
T Consensus 282 ~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 282 TILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 33221 1 11223333 445555443 3 889999988887776664
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=76.84 E-value=60 Score=31.94 Aligned_cols=199 Identities=11% Similarity=0.023 Sum_probs=99.8
Q ss_pred EEEEEecC---CEEEEEeCCCcEEEEECCCCe---EEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEE
Q 046773 147 CRCLTLSD---LYLACGFADGAVRLFDLTTRL---HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVA 217 (453)
Q Consensus 147 v~~lafs~---~~LaSGS~D~TIrlWD~~tg~---~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvW 217 (453)
+..|+|+. .+..+-...+.|+.+++.... ...++.... .....+|++| +..|..+ +..+.|.+-
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-------~~~p~glavD~~~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-------IQAPDGLAVDWIHSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-------CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-------CCCcccEEEEecCCceEEEECCCCeEEEE
Confidence 56888884 355666677899999987632 122222111 0135678886 4555554 445667777
Q ss_pred EeecCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeC-CCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeec
Q 046773 218 VIDDVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLA-GRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFT 294 (453)
Q Consensus 218 d~~~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~-D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~ 294 (453)
+.+.....++. .... .....|+++|.+.++ ..+-.. ...|...++.... .+. ..-.
T Consensus 187 ~~~g~~~~~l~--~~~~-~~P~~iavdp~~g~l--y~td~~~~~~I~~~~~dG~~~~~~~----------------~~~l 245 (400)
T 3p5b_L 187 DTKGVKRKTLF--RENG-SKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGVDIYSLV----------------TENI 245 (400)
T ss_dssp CTTTCSEEEEE--ECSS-CCEEEEEEETTTTEE--EEEECSSSCCEEEEETTSCSCEEEE----------------CSSC
T ss_pred eCCCCceEEEE--eCCC-CCcceEEEecccCeE--EEEeCCCCCEEEEEeCCCCccEEEE----------------ECCC
Confidence 66541111111 1111 112247899865542 223222 2567777776533 211 0111
Q ss_pred cceeEEEEcCC--ceEEEEcC-CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEc
Q 046773 295 EFVGRVRVTSH--ESAVACTS-SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRV 370 (453)
Q Consensus 295 ~~v~~v~~s~~--~~~vas~d-~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~ 370 (453)
.+-+.+++++. .+..+... .+|...|+..............-....+++.+++.+..+. ..+ .|...+.
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~-------~V~~~~~ 318 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINE-------AIFSANR 318 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSC-------SEEEEES
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCC-------eEEEEEc
Confidence 34577888853 35565443 6899999875432111121111111235555565554433 333 5666666
Q ss_pred CCCeeEEEEE
Q 046773 371 DTFEEVCRFS 380 (453)
Q Consensus 371 ~tg~~v~~l~ 380 (453)
.+|+.+..+.
T Consensus 319 ~~G~~~~~i~ 328 (400)
T 3p5b_L 319 LTGSDVNLLA 328 (400)
T ss_dssp SSCCCCEEEE
T ss_pred CCCCceEEEe
Confidence 6776665554
No 292
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.22 E-value=5.8 Score=44.55 Aligned_cols=35 Identities=20% Similarity=0.157 Sum_probs=28.3
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEec
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFR 181 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~ 181 (453)
+.+++..+ .+|.|=+.|+++||||+.+|+|+.+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 34554443 589999999999999999999998853
No 293
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=71.73 E-value=2.9 Score=33.60 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=27.4
Q ss_pred hHhhhhhHHhhcccchhccCCchhHHHhhhhccCCC-CcCcchhHHHHHH
Q 046773 66 AAAALANVFQVCSTWRAVSRSDLLWHRLTRRIWGRT-NLLHATWRDEYIY 114 (453)
Q Consensus 66 ~~~~l~~~aqv~~~W~~l~~~~~~w~~~~~~~~~~~-~~~~~~Wk~~y~~ 114 (453)
.+..|.....-|- .-+.+.+.||++.|.+..+.. .....+|++.|.+
T Consensus 26 tp~QL~~IE~~nP--~L~~dTdeLWk~~c~rdF~~~~p~e~esWRelY~r 73 (97)
T 4hfx_A 26 TPDQLYRIEEYNH--VLIEETDQLWKVHCHRDFKEERPEEYESWREMYLR 73 (97)
T ss_dssp CHHHHHHHHTC--------CCHHHHHHHC----CCSCCCSSSCHHHHHHH
T ss_pred CHHHHHHHHHhCc--ccchhhHHHHHHHHHhHCcccCCCCCCCHHHHHHH
Confidence 4667777766665 456789999999999987542 2334589999976
No 294
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.73 E-value=4.8 Score=46.09 Aligned_cols=29 Identities=24% Similarity=0.183 Sum_probs=25.9
Q ss_pred cCCEEEEEeCCCcEEEEECCCCeEEEEec
Q 046773 153 SDLYLACGFADGAVRLFDLTTRLHVRTFR 181 (453)
Q Consensus 153 s~~~LaSGS~D~TIrlWD~~tg~~~~tl~ 181 (453)
+..+|.|=+.|+++||||+.||+|+.+..
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34799999999999999999999998854
No 295
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=63.14 E-value=1.4 Score=45.72 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhhhhhHhHhhhhhHHhhcccchhc
Q 046773 47 EALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAV 83 (453)
Q Consensus 47 ~~l~~~~~~~~~~~~~~~~~~~~l~~~aqv~~~W~~l 83 (453)
..||.|+..+|+.||. ..+++..++.||++|+.+
T Consensus 14 ~~LPdeil~~I~~~L~---~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYIT---DPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCC---CHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcC---CHHHHHHHHHHhHHHHHh
Confidence 3599999999999983 256889999999999987
No 296
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=61.13 E-value=1.1e+02 Score=28.70 Aligned_cols=221 Identities=8% Similarity=-0.066 Sum_probs=112.6
Q ss_pred CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEEEeecC--CcceEEeeecceecCc
Q 046773 164 GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVAVIDDV--ANETRTAHFGSVMDDG 238 (453)
Q Consensus 164 ~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvWd~~~~--g~~~~~~~~~~v~~~~ 238 (453)
+.|+.-|+.+.+....+.... ...+++++ +..|..+ ...+.|...+.++. +..........+ ...
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~---------~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~-~~p 79 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLR---------NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QAP 79 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCS---------SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC-SCC
T ss_pred CeEEEEECCCcceEehhcCCC---------ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC-CCc
Confidence 568888998887655553211 34567876 3455554 44577888776641 001111111111 111
Q ss_pred eEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC-Cc-eEEEEcC--C
Q 046773 239 VLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS-HE-SAVACTS--S 314 (453)
Q Consensus 239 ~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~-~~-~~vas~d--~ 314 (453)
..+++++.++.+ .++-+..++|.+.|.+...... .+.......+.++++| ++ ++.+... .
T Consensus 80 ~glavd~~~~~l--y~~d~~~~~I~~~~~~g~~~~~--------------~~~~~~~~P~~iavdp~~g~ly~~d~~~~~ 143 (316)
T 1ijq_A 80 DGLAVDWIHSNI--YWTDSVLGTVSVADTKGVKRKT--------------LFRENGSKPRAIVVDPVHGFMYWTDWGTPA 143 (316)
T ss_dssp CEEEEETTTTEE--EEEETTTTEEEEEETTSSSEEE--------------EEECTTCCEEEEEEETTTTEEEEEECSSSC
T ss_pred CEEEEeecCCeE--EEEECCCCEEEEEeCCCCceEE--------------EEECCCCCcceEEeCCCCCEEEEEccCCCC
Confidence 247888755531 2344567889999987544110 0000112346788886 33 4555433 5
Q ss_pred cEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEEEEEec-C--CCeeEE
Q 046773 315 RVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVCRFSLR-A--DRNVNV 389 (453)
Q Consensus 315 tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~-~--~~v~~~ 389 (453)
.|...|+... ....+ ......-.-.+++++++.+..+. ... .|...+.+. .....+... . ..-..+
T Consensus 144 ~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~-------~I~~~d~dg-~~~~~~~~~~~~~~~P~gi 214 (316)
T 1ijq_A 144 KIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH-------SISSIDVNG-GNRKTILEDEKRLAHPFSL 214 (316)
T ss_dssp EEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTT-------EEEEEETTS-CSCEEEEECTTTTSSEEEE
T ss_pred eEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCC-------eEEEEecCC-CceEEEeecCCccCCcEEE
Confidence 7888888632 22222 11111122245666666665543 333 677777763 223333211 1 122344
Q ss_pred EEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEec
Q 046773 390 MGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 390 ~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~ 421 (453)
+. +++++..+. . +.|...|..+|+.+.++.
T Consensus 215 av--~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 215 AV--FEDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EE--ETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EE--ECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 44 345555443 3 899999998887666653
No 297
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=60.16 E-value=1.2e+02 Score=28.94 Aligned_cols=149 Identities=9% Similarity=-0.065 Sum_probs=77.7
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeeccceeEEEEcC--CceEEEEc-CC
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HESAVACT-SS 314 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~~~vas~-d~ 314 (453)
.|+|++..+.+ ..+-...+.|..++++++. .+.. .+. .....+++++ +.+..+.. .+
T Consensus 77 ~l~~d~~~~~l--y~~D~~~~~I~r~~~~g~~~~~~~~---------------~~~-~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 77 ALDFHHRRELV--FWSDVTLDRILRANLNGSNVEEVVS---------------TGL-ESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp EEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEEC---------------SSC-SCCCEEEEETTTTEEEEEETTTT
T ss_pred EEEEeccccEE--EEEeccCCceEEEecCCCCceEEEe---------------CCC-CCccEEEEecCCCeEEEEcCCCC
Confidence 47888765541 3455567889999988765 2110 011 2234577774 23445443 36
Q ss_pred cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEE-eCC-CccccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEE
Q 046773 315 RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVV-ENR-ELENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMG 391 (453)
Q Consensus 315 tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~-s~d-g~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~ 391 (453)
.|.+.|+...............-.-.+++|.+..+... ... + .|...+.+. .....+.. .-..-..+++
T Consensus 139 ~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~-------~I~r~~~dG-~~~~~~~~~~~~~PnGla~ 210 (349)
T 3v64_C 139 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP-------RIEASSMDG-SGRRIIADTHLFWPNGLTI 210 (349)
T ss_dssp EEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC-------EEEEEETTS-CSCEESCCSSCSCEEEEEE
T ss_pred eEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC-------EEEEEeCCC-CCcEEEEECCCCCcceEEE
Confidence 89999987543221111111112224566655544333 222 3 444444443 22222211 1123456788
Q ss_pred eeCCCeEEEEeC--CeEEEEECCCC
Q 046773 392 CMNQGYALMCVE--GVIRVWEVEGG 414 (453)
Q Consensus 392 ~~~~~~lls~s~--~tIrlWD~~tG 414 (453)
+++++.+..+.. +.|...|+...
T Consensus 211 d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 211 DYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCC
Confidence 877777765544 88999998743
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=59.88 E-value=1e+02 Score=28.08 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=37.2
Q ss_pred EEEecCCEEEEEeCC-----CcEEEEECCCCe---EEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCC-----CEE
Q 046773 149 CLTLSDLYLACGFAD-----GAVRLFDLTTRL---HVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDG-----DIH 215 (453)
Q Consensus 149 ~lafs~~~LaSGS~D-----~TIrlWD~~tg~---~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~-----tIk 215 (453)
++.+++.+++.|+.+ ..+.++|+.+.+ -.. +..-.... ..-.++.+++...+.|+.++ ++.
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~-~~~~p~~r-----~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 131 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYS-VAPMNVRR-----GLAGATTLGDMIYVSGGFDGSRRHTSME 131 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEE-ECCCSSCC-----BSCEEEEETTEEEEECCBCSSCBCCEEE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEE-CCCCCCCc-----cceeEEEECCEEEEEcccCCCcccceEE
Confidence 344567777777765 468899999887 322 21111100 01123445777777776543 355
Q ss_pred EEEeec
Q 046773 216 VAVIDD 221 (453)
Q Consensus 216 vWd~~~ 221 (453)
++|..+
T Consensus 132 ~~d~~~ 137 (301)
T 2vpj_A 132 RYDPNI 137 (301)
T ss_dssp EEETTT
T ss_pred EEcCCC
Confidence 666544
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=57.90 E-value=1.3e+02 Score=28.41 Aligned_cols=259 Identities=11% Similarity=0.007 Sum_probs=115.9
Q ss_pred EEEEEecC--CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCCCCEEEEEeecCCc
Q 046773 147 CRCLTLSD--LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVAN 224 (453)
Q Consensus 147 v~~lafs~--~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D~tIkvWd~~~~g~ 224 (453)
+.+++|.+ ..+|.| .++.| +.....|+.-..+...... ....+.+|+|++..+..++.++.|.. -...|
T Consensus 38 ~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~----~~~~~~~i~~~~~~~~~~g~~g~i~~--S~DgG- 108 (327)
T 2xbg_A 38 ILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDH----SDYRFNSVSFQGNEGWIVGEPPIMLH--TTDGG- 108 (327)
T ss_dssp EEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSC----CCCEEEEEEEETTEEEEEEETTEEEE--ESSTT-
T ss_pred EEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCC----CCccEEEEEecCCeEEEEECCCeEEE--ECCCC-
Confidence 78999953 456644 56665 4455556533332211000 01246778887766555555664432 22213
Q ss_pred ceEEe------eecceecCceEEEEeCCCceeeEEEEeeCCCeE-EEeeCCCCcEEecccccCCcceeeeeee-eeeccc
Q 046773 225 ETRTA------HFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAF-HIWDRQAEEVFVGGDLTDHNTVMGWRML-TEFTEF 296 (453)
Q Consensus 225 ~~~~~------~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tI-rvWD~~tg~~~~g~~l~~~~~v~~w~~l-~~h~~~ 296 (453)
.+.+. +.+.+ ..|.+.++++. ++.+. ++.| |-+| .|++ |..+ ......
T Consensus 109 ~tW~~~~~~~~~~~~~----~~i~~~~~~~~---~~~~~-~g~v~~S~D--gG~t--------------W~~~~~~~~~~ 164 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSP----RLIKALGNGSA---EMITN-VGAIYRTKD--SGKN--------------WQALVQEAIGV 164 (327)
T ss_dssp SSCEECCCCTTCSSCE----EEEEEEETTEE---EEEET-TCCEEEESS--TTSS--------------EEEEECSCCCC
T ss_pred CCceECccccCCCCCe----EEEEEECCCCE---EEEeC-CccEEEEcC--CCCC--------------CEEeecCCCcc
Confidence 11111 11111 13566666663 34443 4433 4333 2331 2211 122345
Q ss_pred eeEEEEcCCceEEE-EcCCc-EEEEEC--CCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCC
Q 046773 297 VGRVRVTSHESAVA-CTSSR-VITFDL--RNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDT 372 (453)
Q Consensus 297 v~~v~~s~~~~~va-s~d~t-IrlWDl--~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~t 372 (453)
+..+.+++++.+++ +.++. .+-+|- .+-+.+ ..+......-..+++++.. ..++.++ .+.+...+.
T Consensus 165 ~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~-~~~~~~G-------~~~~s~~D~ 234 (327)
T 2xbg_A 165 MRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRL-WMIVNGG-------KIAFSDPDN 234 (327)
T ss_dssp EEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCE-EEEETTT-------EEEEEETTE
T ss_pred eEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCE-EEEeCCc-------eEEEecCCC
Confidence 66788887665544 44444 455553 221111 1111222222334455544 4455566 554443222
Q ss_pred CeeEEEEEe----cCCCeeEEEEeeCCCeEEEEeCCeEEEEECCCCeEEEEecc---cCCceEE--EEecCCCEEEEEeC
Q 046773 373 FEEVCRFSL----RADRNVNVMGCMNQGYALMCVEGVIRVWEVEGGEYMYSFRE---RIGEEVI--AFVGDDRHVAASCG 443 (453)
Q Consensus 373 g~~v~~l~~----~~~~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~~l~tL~g---h~~~~V~--a~s~d~~~lasg~D 443 (453)
|+.-..+.. ....+..+.+.+++..++++..+.| ++-...|+.=..+.. .... +. .+.++++.++.|.+
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~-~~~v~~~~~~~~~~~G~~ 312 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSN-FYKILFFSPDQGFILGQK 312 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSC-CCEEEEEETTEEEEECST
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCC-eEEEEEECCCceEEEcCC
Confidence 322111111 1123556666655554444444766 444444544333331 2222 33 34455665666688
Q ss_pred CcEEEEe
Q 046773 444 TNIHLWD 450 (453)
Q Consensus 444 ~~IklWD 450 (453)
|+|.-++
T Consensus 313 G~i~~~~ 319 (327)
T 2xbg_A 313 GILLRYV 319 (327)
T ss_dssp TEEEEEC
T ss_pred ceEEEEc
Confidence 8877654
No 300
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=55.50 E-value=1.4e+02 Score=28.21 Aligned_cols=150 Identities=8% Similarity=-0.089 Sum_probs=75.6
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc---EEecccccCCcceeeeeeeeeeccceeEEEEcC--CceEEEEc-C
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE---VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HESAVACT-S 313 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~---~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~~~vas~-d 313 (453)
.|+|++.+.. ...+-...+.|..+++.++. .+. ..+. .....+++++ +.+..+.. .
T Consensus 39 ~ld~d~~~~~--lyw~D~~~~~I~r~~~~g~~~~~~~~---------------~~~l-~~p~glavd~~~g~ly~~d~~~ 100 (318)
T 3sov_A 39 AVDFVFSHGL--IYWSDVSEEAIKRTEFNKTESVQNVV---------------VSGL-LSPDGLACDWLGEKLYWTDSET 100 (318)
T ss_dssp EEEEEGGGTE--EEEEETTTTEEEEEETTSSSCCCEEE---------------EECC-SCCCEEEEETTTTEEEEEETTT
T ss_pred EEEEEeCCCE--EEEEECCCCcEEEEEccCCCceEEEE---------------cCCC-CCccEEEEEcCCCeEEEEECCC
Confidence 4677775443 13344566788888887653 111 0011 2234577774 23445443 3
Q ss_pred CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEEe
Q 046773 314 SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMGC 392 (453)
Q Consensus 314 ~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~~ 392 (453)
+.|.+.|+...............-.-.++++.+..+..+.... ...|...+.+ |.....+.. .-..-..++++
T Consensus 101 ~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~-----~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd 174 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE-----VPKIERAGMD-GSSRFIIINSEIYWPNGLTLD 174 (318)
T ss_dssp TEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS-----SCEEEEEETT-SCSCEEEECSSCSCEEEEEEE
T ss_pred CEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-----CCEEEEEEcC-CCCeEEEEECCCCCccEEEEe
Confidence 6899999875432111111111122345666555544433221 0033333443 322222211 11234567888
Q ss_pred eCCCeEEEEeC--CeEEEEECCC
Q 046773 393 MNQGYALMCVE--GVIRVWEVEG 413 (453)
Q Consensus 393 ~~~~~lls~s~--~tIrlWD~~t 413 (453)
++++.+..+.. +.|...|+..
T Consensus 175 ~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 175 YEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS
T ss_pred ccCCEEEEEECCCCEEEEEcCCC
Confidence 87777765544 8999999864
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=53.37 E-value=1.3e+02 Score=27.39 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=31.8
Q ss_pred EEEEeC--CCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCC----CCEEEEEeec
Q 046773 157 LACGFA--DGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLD----GDIHVAVIDD 221 (453)
Q Consensus 157 LaSGS~--D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D----~tIkvWd~~~ 221 (453)
++.|+. ...+.++|+.+++-. .+..-.... ..-.++.+++..++.|+.+ .++.++|..+
T Consensus 15 ~~~GG~~~~~~~~~~d~~~~~W~-~~~~~p~~r-----~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~ 79 (306)
T 3ii7_A 15 IALFGGSQPQSCRYFNPKDYSWT-DIRCPFEKR-----RDAACVFWDNVVYILGGSQLFPIKRMDCYNVVK 79 (306)
T ss_dssp EEEECCSSTTSEEEEETTTTEEE-ECCCCSCCC-----BSCEEEEETTEEEEECCBSSSBCCEEEEEETTT
T ss_pred EEEeCCCCCceEEEecCCCCCEe-cCCCCCccc-----ceeEEEEECCEEEEEeCCCCCCcceEEEEeCCC
Confidence 334443 367888999988743 222111100 0112345677777888765 4456666554
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=50.19 E-value=1.8e+02 Score=27.82 Aligned_cols=188 Identities=9% Similarity=-0.058 Sum_probs=0.0
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC-----ceEEEEcC--
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH-----ESAVACTS-- 313 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~-----~~~vas~d-- 313 (453)
++|+|||+ |+.+..++.|++++ +++. ..+........-......|+|+|+ .+.++...
T Consensus 36 ia~~pdG~----l~V~e~~g~I~~i~--~g~~---------~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 36 LAFLPDGG----MLIAERPGRIRLFR--EGRL---------STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp EEECTTSC----EEEEETTTEEEEEE--TTEE---------EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred EEEcCCCe----EEEEeCCCeEEEEE--CCCc---------cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC
Q ss_pred ----CcEEEEECC-----CCceEEE-Ee---eccCCeEEEEEEecCCEEEEEeCCCccccCcceE-----------EEEE
Q 046773 314 ----SRVITFDLR-----NQGMVLG-ER---GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA-----------IVRR 369 (453)
Q Consensus 314 ----~tIrlWDl~-----t~~~~~~-~~---g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i-----------~Iw~ 369 (453)
..|..+++. +.+.+.. .. +..|...-..|+++|..+++....+ .. +|+.
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~-------~~~~~~d~~~~~g~I~r 173 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVY-------ERELAQDLASLGGKILR 173 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTT-------CGGGGGCTTCSSSEEEE
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCC-------CCccccCCCCCceEEEE
Q ss_pred cCCCe--------------eEEEEEecCCCeeEEEEee-CCCeEEEEeC-CeE------EEEECCCCe------------
Q 046773 370 VDTFE--------------EVCRFSLRADRNVNVMGCM-NQGYALMCVE-GVI------RVWEVEGGE------------ 415 (453)
Q Consensus 370 ~~tg~--------------~v~~l~~~~~~v~~~~~~~-~~~~lls~s~-~tI------rlWD~~tG~------------ 415 (453)
++... ....+...-.....+++.+ ++...++-.+ ..+ +|.-++.|.
T Consensus 174 i~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 174 LTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGN 253 (352)
T ss_dssp ECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCC
T ss_pred EcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCC
Q ss_pred ------EEEEecccCCceEE-EEecCCCEEEEE-eCCcEEEEecC
Q 046773 416 ------YMYSFRERIGEEVI-AFVGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 416 ------~l~tL~gh~~~~V~-a~s~d~~~lasg-~D~~IklWDl~ 452 (453)
.+..+..|... .- +| .++..+++. ..+.|..-++.
T Consensus 254 ~~~~~~p~~~~~~~~ap-~G~~~-~~G~l~v~~~~~~~v~~v~~~ 296 (352)
T 2ism_A 254 DPRYRDPLYFWPQGFPP-GNLAF-FRGDLYVAGLRGQALLRLVLE 296 (352)
T ss_dssp CTTSCCCSEECTTCCCE-EEEEE-ETTEEEEEETTTTEEEEEEEE
T ss_pred CCCCcCCeEecCCCCCC-cceEE-ECCEEEEEECCCCEEEEEEEC
No 303
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=49.47 E-value=1.7e+02 Score=27.52 Aligned_cols=218 Identities=6% Similarity=-0.059 Sum_probs=107.1
Q ss_pred CCcEEEEECCCCe--EEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEEEeecCCc-ceEEeeecceec
Q 046773 163 DGAVRLFDLTTRL--HVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVAVIDDVAN-ETRTAHFGSVMD 236 (453)
Q Consensus 163 D~TIrlWD~~tg~--~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvWd~~~~g~-~~~~~~~~~v~~ 236 (453)
...|+..|+++.. ....+.+. ....+++|+ +..|... ...+.|+.++.++... .+.. ..+ + .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~---------~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~-~~~-l-~ 79 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGL---------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VSG-L-L 79 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEE---------EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-EEC-C-S
T ss_pred cCeEEEEECCCCceEEEEEecCC---------CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-cCC-C-C
Confidence 4578889988763 11112110 123457776 3445444 4566777777665111 1111 111 1 1
Q ss_pred CceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeeccceeEEEEcCC-c-eEEEEc
Q 046773 237 DGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH-E-SAVACT 312 (453)
Q Consensus 237 ~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~-~-~~vas~ 312 (453)
....+++++.++.+ .++-+..+.|.+.|++... .+. ..-...-+.++++|. + ++.+..
T Consensus 80 ~p~glavd~~~g~l--y~~d~~~~~I~~~~~dG~~~~~l~----------------~~~~~~P~giavdp~~g~ly~td~ 141 (318)
T 3sov_A 80 SPDGLACDWLGEKL--YWTDSETNRIEVSNLDGSLRKVLF----------------WQELDQPRAIALDPSSGFMYWTDW 141 (318)
T ss_dssp CCCEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEE----------------CSSCSSEEEEEEEGGGTEEEEEEC
T ss_pred CccEEEEEcCCCeE--EEEECCCCEEEEEECCCCcEEEEE----------------eCCCCCccEEEEeCCCCEEEEEec
Confidence 11237888755531 3344566789999987543 221 011123456778763 3 444442
Q ss_pred --CCcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEe-CCCccccCcceEEEEEcCCCeeEEEEEe-cCCCee
Q 046773 313 --SSRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVE-NRELENQNRRLAIVRRVDTFEEVCRFSL-RADRNV 387 (453)
Q Consensus 313 --d~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s-~dg~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~ 387 (453)
...|...|+.-... ..+ ......-.-.+++++++.+..+. ... .|...+.+.. ....+.. ....-.
T Consensus 142 ~~~~~I~r~~~dG~~~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~-------~I~~~d~dG~-~~~~~~~~~~~~P~ 212 (318)
T 3sov_A 142 GEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLN-------FIHKSNLDGT-NRQAVVKGSLPHPF 212 (318)
T ss_dssp SSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTT-------EEEEEETTSC-SCEEEECSCCSCEE
T ss_pred CCCCEEEEEEcCCCCe-EEEEECCCCCccEEEEeccCCEEEEEECCCC-------EEEEEcCCCC-ceEEEecCCCCCce
Confidence 35688888763221 111 11111112246676566655443 333 6666666532 2222221 111223
Q ss_pred EEEEeeCCCeEEEEe-C-CeEEEEECCCCeEEEEec
Q 046773 388 NVMGCMNQGYALMCV-E-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 388 ~~~~~~~~~~lls~s-~-~tIrlWD~~tG~~l~tL~ 421 (453)
.++. +.+.+..+. . +.|...|..+|+.+.++.
T Consensus 213 glav--~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 213 ALTL--FEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEE--eCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 3443 344444333 3 889999998887655553
No 304
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=47.98 E-value=1.6e+02 Score=26.79 Aligned_cols=67 Identities=4% Similarity=-0.023 Sum_probs=39.8
Q ss_pred EEEecCCEEEEEeCC----CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeCC------CCEEEEE
Q 046773 149 CLTLSDLYLACGFAD----GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATLD------GDIHVAV 218 (453)
Q Consensus 149 ~lafs~~~LaSGS~D----~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~D------~tIkvWd 218 (453)
++.+++.+++.|+.+ ..+.++|+.+.+-.. +..-..... .-.++.+++..++.|+.+ .++.++|
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 124 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYS-KLGPPTPRD-----SLAACAAEGKIYTSGGSEVGNSALYLFECYD 124 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEE-EECCSSCCB-----SCEEEEETTEEEEECCBBTTBSCCCCEEEEE
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEE-CCCCCcccc-----ceeEEEECCEEEEECCCCCCCcEeeeEEEEe
Confidence 344677777778766 678899999987432 221111100 112345677777888766 3466777
Q ss_pred eec
Q 046773 219 IDD 221 (453)
Q Consensus 219 ~~~ 221 (453)
..+
T Consensus 125 ~~~ 127 (306)
T 3ii7_A 125 TRT 127 (306)
T ss_dssp TTT
T ss_pred CCC
Confidence 554
No 305
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=47.89 E-value=3.6e+02 Score=30.72 Aligned_cols=86 Identities=19% Similarity=0.402 Sum_probs=54.0
Q ss_pred eEEEEEcCCCeeEEEEEecCCC-eeEEEEee---C-CCeEEEEe----------C-CeEEEEECCCCeEEEEec--ccCC
Q 046773 364 LAIVRRVDTFEEVCRFSLRADR-NVNVMGCM---N-QGYALMCV----------E-GVIRVWEVEGGEYMYSFR--ERIG 425 (453)
Q Consensus 364 ~i~Iw~~~tg~~v~~l~~~~~~-v~~~~~~~---~-~~~lls~s----------~-~tIrlWD~~tG~~l~tL~--gh~~ 425 (453)
.+++.|-.+.+.+..+.+.++. +.++.... + ..+++.+. . |.|.+.++..++ +..+. ...+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~~~v~g 886 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEEEEESS
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEEEEcCC
Confidence 5778887788878777777654 33333221 1 24666553 2 678999887543 33331 1245
Q ss_pred ceEEEEec-CCCEEEEEeCCcEEEEecC
Q 046773 426 EEVIAFVG-DDRHVAASCGTNIHLWDFG 452 (453)
Q Consensus 426 ~~V~a~s~-d~~~lasg~D~~IklWDl~ 452 (453)
. |.++.+ +| +|+.|..++|+|||++
T Consensus 887 ~-v~al~~~~g-~Lla~ig~~l~vy~l~ 912 (1158)
T 3ei3_A 887 A-VYSMVEFNG-KLLASINSTVRLYEWT 912 (1158)
T ss_dssp C-EEEEEEETT-EEEEEETTEEEEEEEC
T ss_pred c-CEEEeeeCC-EEEEEcCCEEEEEECC
Confidence 5 888774 66 5666766899999986
No 306
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=45.98 E-value=97 Score=28.77 Aligned_cols=76 Identities=11% Similarity=0.125 Sum_probs=0.0
Q ss_pred EEEEecCCCeeEEEEeeCCCeEEEEeC--CeEEEEECCCCeEEEEe--cccCCceEEEEecCCCEEEEE-eCCcEEEEec
Q 046773 377 CRFSLRADRNVNVMGCMNQGYALMCVE--GVIRVWEVEGGEYMYSF--RERIGEEVIAFVGDDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 377 ~~l~~~~~~v~~~~~~~~~~~lls~s~--~tIrlWD~~tG~~l~tL--~gh~~~~V~a~s~d~~~lasg-~D~~IklWDl 451 (453)
+.+.+-.+.+..++++++++.+.++.+ +.|-.-|+. |+.++++ .|..+..=-++.++++++++. .++.+.+.++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Q ss_pred CC
Q 046773 452 GA 453 (453)
Q Consensus 452 ~~ 453 (453)
..
T Consensus 99 ~~ 100 (255)
T 3qqz_A 99 TP 100 (255)
T ss_dssp CT
T ss_pred CC
No 307
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=43.82 E-value=1.2e+02 Score=29.37 Aligned_cols=107 Identities=9% Similarity=0.101 Sum_probs=57.7
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEE--E-EcCCeEEEE--eCCCCEEEEEeecCCcceEEe
Q 046773 155 LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGI--I-ITDSQLIFA--TLDGDIHVAVIDDVANETRTA 229 (453)
Q Consensus 155 ~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i--~-f~g~~Lasg--S~D~tIkvWd~~~~g~~~~~~ 229 (453)
.+++.++.|+.|.-.|.+||+.+.++.... ..+ .+..- + ..+..++.+ +.|+.+...+.++ |......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~---~~p---~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~ 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN---FQP---LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPL 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG---SCC---SEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc---cCC---cEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeee
Confidence 467889999999999999999999987420 011 11100 0 011122222 4566666555544 3111111
Q ss_pred eecceecCceEEEE------------eCCCceeeEEEEeeCCCeEEEeeCCCCcEE
Q 046773 230 HFGSVMDDGVLIDF------------TGCSRYWVGLYAGLAGRAFHIWDRQAEEVF 273 (453)
Q Consensus 230 ~~~~v~~~~~~v~F------------s~dg~~~~~LaSgS~D~tIrvWD~~tg~~~ 273 (453)
-...... ...+.+ +.+| .+++|+.++++---|++||+.+
T Consensus 84 ~~~~lv~-~SP~~~~~~pvv~~~~~~~~~g----~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 84 SIRQLVS-TSPLHLKTNIVVNDSGKIVEDE----KVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp EHHHHHT-TCSEEEECC----------CCE----EEEECEEEEEEEEEETTTCCEE
T ss_pred cccccee-ccccccCCCceeecccccccCC----EEEEEecCCEEEEEECCCCcEE
Confidence 1000000 000111 1232 3678999999999999999943
No 308
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=42.82 E-value=34 Score=38.28 Aligned_cols=35 Identities=6% Similarity=0.040 Sum_probs=26.0
Q ss_pred eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe
Q 046773 386 NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL 420 (453)
+.+++..++..++.+-+- +++|||++.+|+|+.+.
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 334444445667766655 99999999999999875
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=39.84 E-value=3.5e+02 Score=28.30 Aligned_cols=184 Identities=9% Similarity=-0.046 Sum_probs=90.3
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCc--EEecccccCCcceeeeeeeeeeccceeEEEEcC--CceEEEEc-CC
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE--VFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HESAVACT-SS 314 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~--~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~~~vas~-d~ 314 (453)
.|+|++++..+ ..+-..++.|..+++.... .+.. .+. .....+++++ +.+..+.. .+
T Consensus 41 ~l~~d~~~~~l--ywtD~~~~~I~r~~~~g~~~~~v~~---------------~g~-~~P~GlAvD~~~~~LY~tD~~~~ 102 (628)
T 4a0p_A 41 ALDFDVTDNRI--YWTDISLKTISRAFMNGSALEHVVE---------------FGL-DYPEGMAVDWLGKNLYWADTGTN 102 (628)
T ss_dssp EEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEEC---------------SSC-SCCCEEEEETTTTEEEEEETTTT
T ss_pred EEEEECCCCEE--EEEECCCCeEEEEECCCCCcEEEEe---------------CCC-CCcceEEEEeCCCEEEEEECCCC
Confidence 48898876541 3354567889888887643 2110 011 2234577763 33555543 36
Q ss_pred cEEEEECCCCceEEEEe-eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCeeEEEEee
Q 046773 315 RVITFDLRNQGMVLGER-GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNVNVMGCM 393 (453)
Q Consensus 315 tIrlWDl~t~~~~~~~~-g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~~~~~~~ 393 (453)
+|.+-|+..... ..+. .....-.-.+++|....+....... ...|...+.+. .....+...-.+-..+++.+
T Consensus 103 ~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG-~~~~~l~~~~~~P~GlalD~ 175 (628)
T 4a0p_A 103 RIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGG-----KPKIDRAAMDG-SERTTLVPNVGRANGLTIDY 175 (628)
T ss_dssp EEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTS-CSCEEEECSCSSEEEEEEET
T ss_pred EEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCC-----CCEEEEEeCCC-CceEEEECCCCCcceEEEcc
Confidence 788889875432 1111 1111222345666444444433221 00333334442 22233322223345677777
Q ss_pred CCCeEEEEeC--CeEEEEECCCCeEEEEecccCCceEEEEecCCCEE-EEE-eCCcEEEEe
Q 046773 394 NQGYALMCVE--GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDRHV-AAS-CGTNIHLWD 450 (453)
Q Consensus 394 ~~~~lls~s~--~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~~l-asg-~D~~IklWD 450 (453)
+++++..+.. +.|...|+..+.. ..+...... -.+++.++..| ++- ..+.|..-|
T Consensus 176 ~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~-P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 176 AKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPH-PFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSC-EEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCC-ceEEEEECCEEEEecCCCCEEEEEE
Confidence 7777765544 8899999875433 334332222 23333333333 343 455565544
No 310
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.45 E-value=27 Score=39.83 Aligned_cols=35 Identities=6% Similarity=0.040 Sum_probs=26.1
Q ss_pred eeEEEEeeCCCeEEEEeC-CeEEEEECCCCeEEEEe
Q 046773 386 NVNVMGCMNQGYALMCVE-GVIRVWEVEGGEYMYSF 420 (453)
Q Consensus 386 v~~~~~~~~~~~lls~s~-~tIrlWD~~tG~~l~tL 420 (453)
+.+++..++..++++-+- +++||||+.+|+|+.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 334444556677766665 99999999999998874
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=39.18 E-value=2.2e+02 Score=25.79 Aligned_cols=100 Identities=10% Similarity=-0.073 Sum_probs=45.0
Q ss_pred CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCC-eeEEEEe
Q 046773 314 SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADR-NVNVMGC 392 (453)
Q Consensus 314 ~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~-v~~~~~~ 392 (453)
..+-++|+.++.-..............++..++..++.+..++. ...+++.++|..+.+=. .+..-+.. ....+..
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~ 249 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGP--LVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCA 249 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSS--SBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCC--cccceEEEEeCCCCCEe-eCCCCCCccccCeEEE
Confidence 35889999987432211000000011233345555566554431 11236777887776321 11111111 0111112
Q ss_pred eCCCeEEEEeC------CeEEEEECCCCeE
Q 046773 393 MNQGYALMCVE------GVIRVWEVEGGEY 416 (453)
Q Consensus 393 ~~~~~lls~s~------~tIrlWD~~tG~~ 416 (453)
.++...+.++. ..|.++|+++.+-
T Consensus 250 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 250 VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 23333333321 4689999988754
No 312
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=38.90 E-value=1.3e+02 Score=32.69 Aligned_cols=37 Identities=8% Similarity=0.152 Sum_probs=32.7
Q ss_pred EEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEe
Q 046773 338 YVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL 381 (453)
Q Consensus 338 ~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~ 381 (453)
.|.++.++...+++.+.|. ++|||++.+++++.+...
T Consensus 223 ~Is~~~~~~~fLftL~~Dh-------~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNC-------HLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEETTTEEEEEETTC-------EEEEEETTTTEEEEEEET
T ss_pred eEEEeccCCcEEEEEEcCC-------eEEEEEcCCCceEEeecc
Confidence 5677788888899999999 999999999999988876
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=38.29 E-value=2.3e+02 Score=25.69 Aligned_cols=136 Identities=10% Similarity=-0.022 Sum_probs=60.5
Q ss_pred cEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCee-EEEEee
Q 046773 315 RVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNV-NVMGCM 393 (453)
Q Consensus 315 tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~-~~~~~~ 393 (453)
.+-++|+.+.+-..............+...++..++.+..++...+...++.++|..+.+=.. +..-+.... ..+...
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~ 203 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY-IAEMSTRRSGAGVGVL 203 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE-CCCCccccccccEEEE
Confidence 577899998753222110000011122334555555554433111112257777877653211 111111111 111122
Q ss_pred CCCeEEEEeC------CeEEEEECCCCeEEE--EecccCCceEEEEecCCCEEEEE-eCC-----cEEEEecC
Q 046773 394 NQGYALMCVE------GVIRVWEVEGGEYMY--SFRERIGEEVIAFVGDDRHVAAS-CGT-----NIHLWDFG 452 (453)
Q Consensus 394 ~~~~lls~s~------~tIrlWD~~tG~~l~--tL~gh~~~~V~a~s~d~~~lasg-~D~-----~IklWDl~ 452 (453)
++...+.++. +.+.++|+++.+-.. .++..... -.++..++++++.| .++ .|.++|+.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AGVCAVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-CeEEEECCEEEEECCcCCCcccccEEEEcCC
Confidence 3333333321 578999999875532 22211111 11334577776666 543 47777764
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=33.12 E-value=2.8e+02 Score=25.25 Aligned_cols=67 Identities=7% Similarity=0.053 Sum_probs=36.1
Q ss_pred EEEecCCEEEEEeCC----CcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEcCCeEEEEeC----C-----CCEE
Q 046773 149 CLTLSDLYLACGFAD----GAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIITDSQLIFATL----D-----GDIH 215 (453)
Q Consensus 149 ~lafs~~~LaSGS~D----~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~g~~LasgS~----D-----~tIk 215 (453)
|+.+++.+++-|+.+ ..+.++|+.+.+-. .+..-..... .-..+.+++..++.|+. + ..+.
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~-----~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 93 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWL-RLADLQVPRS-----GLAGCVVGGLLYAVGGRNNSPDGNTDSSALD 93 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEE-ECCCCSSCCB-----SCEEEEETTEEEEECCEEEETTEEEECCCEE
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEe-ECCCCCcccc-----cceEEEECCEEEEECCCcCCCCCCeecceEE
Confidence 455566666666642 47889999998743 2321111000 11224456777777765 2 3456
Q ss_pred EEEeec
Q 046773 216 VAVIDD 221 (453)
Q Consensus 216 vWd~~~ 221 (453)
++|..+
T Consensus 94 ~~d~~~ 99 (308)
T 1zgk_A 94 CYNPMT 99 (308)
T ss_dssp EEETTT
T ss_pred EECCCC
Confidence 666544
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=31.83 E-value=6.2e+02 Score=28.76 Aligned_cols=126 Identities=10% Similarity=0.004 Sum_probs=64.3
Q ss_pred CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEE-EEEecCCCeeEEEEe
Q 046773 314 SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVC-RFSLRADRNVNVMGC 392 (453)
Q Consensus 314 ~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~-~l~~~~~~v~~~~~~ 392 (453)
+.|.++++..++ +....-......|.++..-+.+++.+ ... .++||++...+.+. .....++ +..+...
T Consensus 864 Gri~vf~v~~~k-L~lv~~~~v~g~v~al~~~~g~Lla~-ig~-------~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~ 933 (1158)
T 3ei3_A 864 GRIVVFQYSDGK-LQTVAEKEVKGAVYSMVEFNGKLLAS-INS-------TVRLYEWTTEKELRTECNHYNN-IMALYLK 933 (1158)
T ss_dssp EEEEEEEEETTE-EEEEEEEEESSCEEEEEEETTEEEEE-ETT-------EEEEEEECTTSCEEEEEEECCC-SCEEEEE
T ss_pred eEEEEEEEECCE-EEEEEEEEcCCcCEEEeeeCCEEEEE-cCC-------EEEEEECCCCceEEEEeecccc-EEEEEEe
Confidence 568999987443 22210011123467776545555544 445 89999998654333 2222222 2222222
Q ss_pred eCCCeEEEEeC-CeEE--EEECCCCeEEEEeccc--CCceEEEEec-CCCEEEEE-eCCcEEEEec
Q 046773 393 MNQGYALMCVE-GVIR--VWEVEGGEYMYSFRER--IGEEVIAFVG-DDRHVAAS-CGTNIHLWDF 451 (453)
Q Consensus 393 ~~~~~lls~s~-~tIr--lWD~~tG~~l~tL~gh--~~~~V~a~s~-d~~~lasg-~D~~IklWDl 451 (453)
..+.+++.+.. ..|. -|+...++.. .+-.+ ..+ +.+..+ |...++.+ .+++|.+...
T Consensus 934 ~~~~~I~vgD~~~Sv~~~~y~~~~~~L~-~~a~D~~~~~-vta~~~ld~~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 934 TKGDFILVGDLMRSVLLLAYKPMEGNFE-EIARDFNPNW-MSAVEILDDDNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp EETTEEEEEESSBCEEEEEEETTTTEEE-EEEECCSCBC-EEEEEEEETTEEEEEETTSEEEEEEE
T ss_pred ccCCEEEEEEhhheEEEEEEEcCCCeEE-EEEeeccccc-EEEEEEEccCcEEEEcCCCcEEEEec
Confidence 23556555543 4343 3666655443 33222 233 654443 44566667 8899888754
No 316
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=31.76 E-value=3.1e+02 Score=25.35 Aligned_cols=152 Identities=10% Similarity=-0.029 Sum_probs=77.6
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCC---cEEecccccCCcceeeeeeeeeeccceeEEEEcC--CceEEEEc-C
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAE---EVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HESAVACT-S 313 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg---~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~~~vas~-d 313 (453)
.++|+++++.+ ..+-...+.|...|+.+. .... ..+.........+++++ +.+.++.. .
T Consensus 34 g~~~d~~~~~l--y~~D~~~~~I~~~~~~g~~~~~~~~-------------~~~~~~~~~p~glavd~~~~~ly~~d~~~ 98 (316)
T 1ijq_A 34 ALDTEVASNRI--YWSDLSQRMICSTQLDRAHGVSSYD-------------TVISRDIQAPDGLAVDWIHSNIYWTDSVL 98 (316)
T ss_dssp EEEEETTTTEE--EEEETTTTEEEEEEC--------CE-------------EEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred EEEEEeCCCEE--EEEECCCCcEEEEECCCCCCCcccE-------------EEEeCCCCCcCEEEEeecCCeEEEEECCC
Confidence 48899876541 345556789999998762 1000 00100012235677764 33555543 4
Q ss_pred CcEEEEECCCCceEEEE-eeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEe-cCCCeeEEEE
Q 046773 314 SRVITFDLRNQGMVLGE-RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSL-RADRNVNVMG 391 (453)
Q Consensus 314 ~tIrlWDl~t~~~~~~~-~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~-~~~~v~~~~~ 391 (453)
++|.+.|+..... ..+ ......-.-.+++|.+..+..+.... ...|...+.+ |+....+.. .-..-..+++
T Consensus 99 ~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-----~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~ 171 (316)
T 1ijq_A 99 GTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----PAKIKKGGLN-GVDIYSLVTENIQWPNGITL 171 (316)
T ss_dssp TEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSS-----SCEEEEEETT-SCCEEEEECSSCSCEEEEEE
T ss_pred CEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEccCC-----CCeEEEEcCC-CCCeEEEEECCCCCceEEEE
Confidence 7899999875432 222 11111222245666555554443321 0144444444 333333321 1233567888
Q ss_pred eeCCCeEEEEeC--CeEEEEECCC
Q 046773 392 CMNQGYALMCVE--GVIRVWEVEG 413 (453)
Q Consensus 392 ~~~~~~lls~s~--~tIrlWD~~t 413 (453)
+++++.+..+.. +.|...|+..
T Consensus 172 d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 172 DLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTS
T ss_pred eccCCEEEEEECCCCeEEEEecCC
Confidence 877777765544 7999999874
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=31.09 E-value=3.2e+02 Score=25.19 Aligned_cols=57 Identities=14% Similarity=0.068 Sum_probs=34.4
Q ss_pred eEEEEcCCceEEEEcCCcEEEEECCCCceEE-----EEeecc--CCeEEEEEEecCCEEEEEeCCC
Q 046773 298 GRVRVTSHESAVACTSSRVITFDLRNQGMVL-----GERGYG--RGLYVTSVDVNAEAYIVVENRE 356 (453)
Q Consensus 298 ~~v~~s~~~~~vas~d~tIrlWDl~t~~~~~-----~~~g~~--~~~~v~~~~~~g~~l~s~s~dg 356 (453)
.++.|++++.+-++.|+.|.-+|.-+.++-. +..+.. .......++|+|..++.. ++
T Consensus 91 ~a~~fD~~G~LYav~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 91 QFLFFDPNGYLYAVSKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp SEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred eEEEECCCCCEEEeCCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 5688999998777788999877874422110 111111 133445667777776655 77
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=29.78 E-value=5e+02 Score=27.08 Aligned_cols=150 Identities=8% Similarity=0.005 Sum_probs=81.1
Q ss_pred EEEEEecC---CEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEEc--CCeEEEE-eCCCCEEEEEee
Q 046773 147 CRCLTLSD---LYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIIIT--DSQLIFA-TLDGDIHVAVID 220 (453)
Q Consensus 147 v~~lafs~---~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f~--g~~Lasg-S~D~tIkvWd~~ 220 (453)
...|+|+. ....+-..+++|+.+++........+...- ....+|++| +..|..+ +..+.|.+-+.+
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~--------~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL--------DYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--------SCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC--------CCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 56888885 356677778999999997654333332110 123467776 4556554 445667776665
Q ss_pred cCCcceEEeeecceecCceEEEEeCCCceeeEEEEeeC--CCeEEEeeCCCCcEEecccccCCcceeeeeeeeeecccee
Q 046773 221 DVANETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLA--GRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVG 298 (453)
Q Consensus 221 ~~g~~~~~~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~--D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~ 298 (453)
.....++. ... ......|+++|.... |+-... ...|...++...... .+...-.+-+
T Consensus 111 G~~~~~l~--~~~-l~~P~~iavdp~~G~---lY~tD~g~~~~I~r~~~dG~~~~---------------~l~~~~~~P~ 169 (628)
T 4a0p_A 111 GQHRQVLV--WKD-LDSPRALALDPAEGF---MYWTEWGGKPKIDRAAMDGSERT---------------TLVPNVGRAN 169 (628)
T ss_dssp STTCEEEE--CSS-CCCEEEEEEETTTTE---EEEEECSSSCEEEEEETTSCSCE---------------EEECSCSSEE
T ss_pred CCcEEEEE--eCC-CCCcccEEEccCCCe---EEEeCCCCCCEEEEEeCCCCceE---------------EEECCCCCcc
Confidence 41112221 111 112235889985433 333232 356666676544311 0111123457
Q ss_pred EEEEcCC--ceEEEEcC-CcEEEEECCCCc
Q 046773 299 RVRVTSH--ESAVACTS-SRVITFDLRNQG 325 (453)
Q Consensus 299 ~v~~s~~--~~~vas~d-~tIrlWDl~t~~ 325 (453)
.++++++ .+..+... +.|...|+....
T Consensus 170 GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 7888863 35565443 689999997543
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=29.45 E-value=3.3e+02 Score=24.82 Aligned_cols=134 Identities=9% Similarity=-0.046 Sum_probs=58.7
Q ss_pred CcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCee-EEEEe
Q 046773 314 SRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNV-NVMGC 392 (453)
Q Consensus 314 ~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~-~~~~~ 392 (453)
..+.++|+.+.+-............-.+...++..++.+..++... ..++.++|..+.+=. .+..-+.... ..+..
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~ 166 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIH--HNSVERYEPERDEWH-LVAPMLTRRIGVGVAV 166 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEE--CCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcc--cccEEEECCCCCeEe-ECCCCCccccceEEEE
Confidence 4688899988643221100000000122334555555554333111 125667777665311 1111111111 11111
Q ss_pred eCCCeEEEEeC-------CeEEEEECCCCeEEE--EecccCCceEEEEecCCCEEEEE-eC-----CcEEEEecC
Q 046773 393 MNQGYALMCVE-------GVIRVWEVEGGEYMY--SFRERIGEEVIAFVGDDRHVAAS-CG-----TNIHLWDFG 452 (453)
Q Consensus 393 ~~~~~lls~s~-------~tIrlWD~~tG~~l~--tL~gh~~~~V~a~s~d~~~lasg-~D-----~~IklWDl~ 452 (453)
.+ +.+...++ +.+.++|+.+.+-.. .++..... -.++..++++++.| .+ ..|.++|+.
T Consensus 167 ~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 167 LN-RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSG-AGVCVLHNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp ET-TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EC-CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcccc-ceEEEECCEEEEEeCCCCCCccceEEEEeCC
Confidence 23 34443321 578999998875432 22211111 11333467766665 43 457777753
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=28.35 E-value=3.6e+02 Score=25.03 Aligned_cols=144 Identities=8% Similarity=0.038 Sum_probs=64.9
Q ss_pred EEEEEecCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCCccccccceEEEEEE-cCCeEEEEeCCCCEEEEEeecCC--
Q 046773 147 CRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLGQFSRAVSGIII-TDSQLIFATLDGDIHVAVIDDVA-- 223 (453)
Q Consensus 147 v~~lafs~~~LaSGS~D~TIrlWD~~tg~~~~tl~gh~~~~~~~~s~~V~~i~f-~g~~LasgS~D~tIkvWd~~~~g-- 223 (453)
+.+++|+++.+...+.++.|.. ....|+.-..+..... ....+..|.+ ++..++.++.++.|. --...|
T Consensus 82 ~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~g~v~--~S~DgG~t 153 (327)
T 2xbg_A 82 FNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPK-----LPGSPRLIKALGNGSAEMITNVGAIY--RTKDSGKN 153 (327)
T ss_dssp EEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTT-----CSSCEEEEEEEETTEEEEEETTCCEE--EESSTTSS
T ss_pred EEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccC-----CCCCeEEEEEECCCCEEEEeCCccEE--EEcCCCCC
Confidence 7889998764444455665533 3344553333221000 0012344554 333433334455442 211113
Q ss_pred cceEE-eeecceecCceEEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeee-eeeccceeEEE
Q 046773 224 NETRT-AHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRML-TEFTEFVGRVR 301 (453)
Q Consensus 224 ~~~~~-~~~~~v~~~~~~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l-~~h~~~v~~v~ 301 (453)
..... .....+ ..++|+|++++ ++.+......+-+|- .|+. |..+ ......+..+.
T Consensus 154 W~~~~~~~~~~~----~~~~~~~~~~~---~~~g~~G~~~~S~d~-gG~t--------------W~~~~~~~~~~~~~~~ 211 (327)
T 2xbg_A 154 WQALVQEAIGVM----RNLNRSPSGEY---VAVSSRGSFYSTWEP-GQTA--------------WEPHNRTTSRRLHNMG 211 (327)
T ss_dssp EEEEECSCCCCE----EEEEECTTSCE---EEEETTSSEEEEECT-TCSS--------------CEEEECCSSSCEEEEE
T ss_pred CEEeecCCCcce----EEEEEcCCCcE---EEEECCCcEEEEeCC-CCCc--------------eeECCCCCCCccceeE
Confidence 11111 111111 24788998875 455555555555553 1221 1111 01123456677
Q ss_pred EcCCce-EEEEcCCcEEEEE
Q 046773 302 VTSHES-AVACTSSRVITFD 320 (453)
Q Consensus 302 ~s~~~~-~vas~d~tIrlWD 320 (453)
+++++. ++++.++.+++++
T Consensus 212 ~~~~g~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 212 FTPDGRLWMIVNGGKIAFSD 231 (327)
T ss_dssp ECTTSCEEEEETTTEEEEEE
T ss_pred ECCCCCEEEEeCCceEEEec
Confidence 776554 4445567777764
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.07 E-value=4.4e+02 Score=25.50 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=17.8
Q ss_pred EEecCCCEEEEE--eCCcEEEEecC
Q 046773 430 AFVGDDRHVAAS--CGTNIHLWDFG 452 (453)
Q Consensus 430 a~s~d~~~lasg--~D~~IklWDl~ 452 (453)
+++||+++|..+ ..+.|..+|+.
T Consensus 227 a~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 227 NISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred eECCCCCEEEEEeCCCCeEEEEEEC
Confidence 789999877544 56788888874
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=26.07 E-value=3.6e+02 Score=24.21 Aligned_cols=135 Identities=5% Similarity=-0.074 Sum_probs=61.4
Q ss_pred CcEEEEECCCCc---eEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcCCCeeEEEEEecCCCee-EE
Q 046773 314 SRVITFDLRNQG---MVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVDTFEEVCRFSLRADRNV-NV 389 (453)
Q Consensus 314 ~tIrlWDl~t~~---~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~tg~~v~~l~~~~~~v~-~~ 389 (453)
..+.++|+.++. -............-.++..++..++.+..++.. ...++.++|..+.+=.. +...+.... ..
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~--~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~ 154 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR--RHTSMERYDPNIDQWSM-LGDMQTAREGAG 154 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC--BCCEEEEEETTTTEEEE-EEECSSCCBSCE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc--ccceEEEEcCCCCeEEE-CCCCCCCcccce
Confidence 468899999876 322211000000112233455555555444311 12266777777664221 111121111 11
Q ss_pred EEeeCCCeEEEEe-----C-CeEEEEECCCCeEEEE--ecccCCceEEEEecCCCEEEEE-eC-----CcEEEEecC
Q 046773 390 MGCMNQGYALMCV-----E-GVIRVWEVEGGEYMYS--FRERIGEEVIAFVGDDRHVAAS-CG-----TNIHLWDFG 452 (453)
Q Consensus 390 ~~~~~~~~lls~s-----~-~tIrlWD~~tG~~l~t--L~gh~~~~V~a~s~d~~~lasg-~D-----~~IklWDl~ 452 (453)
+...++...+.++ . ..+.++|+++.+-... ++..... ..++..++++++.| .+ ..|.++|+.
T Consensus 155 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 155 LVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSG-AGVALLNDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccccc-ceEEEECCEEEEEeCCCCCcccceEEEEeCC
Confidence 1122333333332 1 5789999998755332 2211111 12334567766666 43 457777764
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=24.80 E-value=5e+02 Score=25.45 Aligned_cols=142 Identities=11% Similarity=0.148 Sum_probs=0.0
Q ss_pred EEEEcCCceEEE-EcCCcEEEEECCCCceEEEEeeccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEEEcC-CCeeE
Q 046773 299 RVRVTSHESAVA-CTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVRRVD-TFEEV 376 (453)
Q Consensus 299 ~v~~s~~~~~va-s~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw~~~-tg~~v 376 (453)
+.-++|...++| =...++.++|+++...++.......-++-.=++++-=.+++.+ .+--|+++ ..+++
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~t----------aVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDN----------AVYHWSMEGESQPV 140 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESS----------EEEEEESSTTCCCE
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCC----------cEEEEcccCCCCCc
Q ss_pred EEEEecCCC----eeEEEEeeCCCeEEEEe-----C---CeEEEEECCCCeEEEEecccCCceEEEEecCCC-----EEE
Q 046773 377 CRFSLRADR----NVNVMGCMNQGYALMCV-----E---GVIRVWEVEGGEYMYSFRERIGEEVIAFVGDDR-----HVA 439 (453)
Q Consensus 377 ~~l~~~~~~----v~~~~~~~~~~~lls~s-----~---~tIrlWD~~tG~~l~tL~gh~~~~V~a~s~d~~-----~la 439 (453)
..|..|++. +.....+++.++++.++ . |.+.|+.++.+.. +.++||.+. -..+..+|. .++
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~-F~~~~~~g~~~~~~lf~ 218 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAAS-FAQFKMEGNAEESTLFC 218 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEEE-EEEECCTTCSSCEEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeeee-eEEEecCCCCCCceEEE
Q ss_pred EE-eC---CcEEEEecC
Q 046773 440 AS-CG---TNIHLWDFG 452 (453)
Q Consensus 440 sg-~D---~~IklWDl~ 452 (453)
-+ .. ++++|-+++
T Consensus 219 fa~r~~~g~kLhIiEi~ 235 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVG 235 (365)
T ss_dssp EEEEETTEEEEEEEECS
T ss_pred EEEecCCCcEEEEEEcC
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.22 E-value=2e+02 Score=27.83 Aligned_cols=107 Identities=8% Similarity=-0.022 Sum_probs=58.0
Q ss_pred ceEEEEcCCcEEEEECCCCceEEEEeeccCCeEEEEEE-e---cCCEEEEE--eCCCccccCcceEEEEEcCCCeeEEEE
Q 046773 306 ESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVD-V---NAEAYIVV--ENRELENQNRRLAIVRRVDTFEEVCRF 379 (453)
Q Consensus 306 ~~~vas~d~tIrlWDl~t~~~~~~~~g~~~~~~v~~~~-~---~g~~l~s~--s~dg~~~~~~~~i~Iw~~~tg~~v~~l 379 (453)
.+++++.|+.|.-.|.++|+.+-+....... .+.... + .+..++.+ +.|| .+...+..+|.....+
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~-p~~~~~~~~~~~~~~~~vv~p~~dG-------~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQ-PLIEIQEPSRLETYETLIIEPFGDG-------NIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSC-CSEECCCSCTTTSSEEEEECCSTTT-------EEEEEETTTEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccC-CcEEecCCccccCCcEEEEEECCCC-------EEEEEECCCCcEEeee
Confidence 3567788899999999998776554221100 111111 1 12233333 4677 6666677776443333
Q ss_pred EecCCCe--eEEEEe-----------eCCCeEEEEeC-CeEEEEECCCCeEEEEec
Q 046773 380 SLRADRN--VNVMGC-----------MNQGYALMCVE-GVIRVWEVEGGEYMYSFR 421 (453)
Q Consensus 380 ~~~~~~v--~~~~~~-----------~~~~~lls~s~-~tIrlWD~~tG~~l~tL~ 421 (453)
+... .+ ..+.+. ..++.+.+++. +++.--|++||+.+..+.
T Consensus 84 ~~~~-lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 84 SIRQ-LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp EHHH-HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred cccc-ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 2210 00 011111 13445555555 888888999999988875
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=23.68 E-value=5.8e+02 Score=25.78 Aligned_cols=67 Identities=15% Similarity=0.213 Sum_probs=44.2
Q ss_pred CeeEEEEeeCCCeEEEEeCCeEEEEECCCCe------------EEEEec-c-----cCCceEE--EEec---CCCEEEEE
Q 046773 385 RNVNVMGCMNQGYALMCVEGVIRVWEVEGGE------------YMYSFR-E-----RIGEEVI--AFVG---DDRHVAAS 441 (453)
Q Consensus 385 ~v~~~~~~~~~~~lls~s~~tIrlWD~~tG~------------~l~tL~-g-----h~~~~V~--a~s~---d~~~lasg 441 (453)
.++.+..+++|.+++..+..+|.|=.+-.+. ..+++. + .... |. -+.| .+..|+.=
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~-I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSS-IKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCC-EEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCc-eeEEEeccccCCCCeEEEE
Confidence 3667888888888887777889888887332 112222 1 1233 54 2444 55677776
Q ss_pred -eCCcEEEEecC
Q 046773 442 -CGTNIHLWDFG 452 (453)
Q Consensus 442 -~D~~IklWDl~ 452 (453)
+|++||+||+.
T Consensus 146 tsD~~Ir~yDl~ 157 (452)
T 3pbp_A 146 KEDDTITMFDIL 157 (452)
T ss_dssp ETTSCEEEEETT
T ss_pred ecCCEEEEEEcc
Confidence 99999999985
No 326
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=22.81 E-value=4.9e+02 Score=24.65 Aligned_cols=189 Identities=13% Similarity=0.003 Sum_probs=0.0
Q ss_pred EEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcCC-----ceEEEEcC--
Q 046773 241 IDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTSH-----ESAVACTS-- 313 (453)
Q Consensus 241 v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~~-----~~~vas~d-- 313 (453)
++|.|||+ |+.+..++.|+++| .+|+ -. +........-......|+|+|+ .+.++...
T Consensus 34 ia~~pdG~----l~V~e~~g~I~~~d-~~G~-~~---------~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 34 IAPLGGGR----YLVTERPGRLVLIS-PSGK-KL---------VASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp EEEEETTE----EEEEETTTEEEEEC-SSCE-EE---------EEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred EEEcCCCe----EEEEeCCCEEEEEe-CCCc-eE---------eeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Q ss_pred ------CcEEEEECCCC-------ceEEEE--eeccCCeEEEEEEecCCEEEEEeCCCccccCcceE-----------EE
Q 046773 314 ------SRVITFDLRNQ-------GMVLGE--RGYGRGLYVTSVDVNAEAYIVVENRELENQNRRLA-----------IV 367 (453)
Q Consensus 314 ------~tIrlWDl~t~-------~~~~~~--~g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i-----------~I 367 (453)
..|..+++... +.+... .+..|...-..|+++|..+++....+ .. +|
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~-------~~~~~~d~~~~~G~I 171 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAA-------DPRLAQDLSSLAGKI 171 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTT-------CGGGGTCTTCCSSEE
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCC-------CCccccCCCCCCeEE
Q ss_pred EEcC-CCe--------eEEEEEecCCCeeEEEEee-CCCeEEEEeC--CeEEEEECCCCe------------------EE
Q 046773 368 RRVD-TFE--------EVCRFSLRADRNVNVMGCM-NQGYALMCVE--GVIRVWEVEGGE------------------YM 417 (453)
Q Consensus 368 w~~~-tg~--------~v~~l~~~~~~v~~~~~~~-~~~~lls~s~--~tIrlWD~~tG~------------------~l 417 (453)
+.++ .|+ ....+...-.....+++.+ .+...++-.. ..=+|.-++.|. .+
T Consensus 172 ~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 251 (354)
T 3a9g_A 172 LRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPV 251 (354)
T ss_dssp EEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred EEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCE
Q ss_pred EEe-cccCCceEE-EE-------ecCCCEEEEE-eCCcEEEEecC
Q 046773 418 YSF-RERIGEEVI-AF-------VGDDRHVAAS-CGTNIHLWDFG 452 (453)
Q Consensus 418 ~tL-~gh~~~~V~-a~-------s~d~~~lasg-~D~~IklWDl~ 452 (453)
..+ ..|... .- +| ..+++.+++. ..+.|...++.
T Consensus 252 ~~~~~~~~ap-~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 252 IDTGSETWAP-SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp EECTTCCCCE-EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC
T ss_pred eecCCCCcCC-cceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=21.76 E-value=5.9e+02 Score=25.20 Aligned_cols=28 Identities=0% Similarity=-0.114 Sum_probs=19.6
Q ss_pred EEEEeCCCceeeEEEEeeCC-CeEEEeeCCCCc
Q 046773 240 LIDFTGCSRYWVGLYAGLAG-RAFHIWDRQAEE 271 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D-~tIrvWD~~tg~ 271 (453)
.++|.|||+. |++ ... +.|++.+..+|+
T Consensus 31 ~~a~~pdG~l---~V~-e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 31 ALLWGPDNQI---WLT-ERATGKILRVNPESGS 59 (454)
T ss_dssp EEEECTTSCE---EEE-ETTTCEEEEECTTTCC
T ss_pred EEEEcCCCcE---EEE-EcCCCEEEEEECCCCc
Confidence 4899999985 334 444 468888776665
No 328
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=21.02 E-value=7.1e+02 Score=25.80 Aligned_cols=151 Identities=7% Similarity=-0.080 Sum_probs=73.8
Q ss_pred EEEEeCCCceeeEEEEeeCCCeEEEeeCCCCcEEecccccCCcceeeeeeeeeeccceeEEEEcC--CceEEEEc-CCcE
Q 046773 240 LIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEEVFVGGDLTDHNTVMGWRMLTEFTEFVGRVRVTS--HESAVACT-SSRV 316 (453)
Q Consensus 240 ~v~Fs~dg~~~~~LaSgS~D~tIrvWD~~tg~~~~g~~l~~~~~v~~w~~l~~h~~~v~~v~~s~--~~~~vas~-d~tI 316 (453)
.|+|++.+..+ ..+-...+.|..++++...... ..+..-......+++++ +.+..+.. .+.|
T Consensus 44 ~ld~~~~~~~l--y~sD~~~~~I~r~~~~g~~~~~-------------~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I 108 (619)
T 3s94_A 44 AVDFVFSHGLI--YWSDVSEEAIKRTEFNKTESVQ-------------NVVVSGLLSPDGLACDWLGEKLYWTDSETNRI 108 (619)
T ss_dssp EEEEETTTTEE--EEEETTTTEEEEEEC-----CE-------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEeCCCEE--EEEECCCCeEEEEEccCCCceE-------------EEEeCCCCCcCeEEEEecCCEEEEEeCCCCEE
Confidence 47888866541 2343456778888886542100 00000012356788875 33555544 3689
Q ss_pred EEEECCCCceEEEEe-eccCCeEEEEEEecCCEEEEEeCCCccccCcceEEEE--EcCCCeeEEEEEe-cCCCeeEEEEe
Q 046773 317 ITFDLRNQGMVLGER-GYGRGLYVTSVDVNAEAYIVVENRELENQNRRLAIVR--RVDTFEEVCRFSL-RADRNVNVMGC 392 (453)
Q Consensus 317 rlWDl~t~~~~~~~~-g~~~~~~v~~~~~~g~~l~s~s~dg~~~~~~~~i~Iw--~~~tg~~v~~l~~-~~~~v~~~~~~ 392 (453)
.+-|+....+ ..+. .....-.-.++++.+..+....... .-+|+ +.+ |.....+.. .-.+-..++..
T Consensus 109 ~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~-------~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald 179 (619)
T 3s94_A 109 EVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGE-------VPKIERAGMD-GSSRFIIINSEIYWPNGLTLD 179 (619)
T ss_dssp EEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSS-------SCEEEEEETT-SCSCEEEECSSCSSEEEEEEE
T ss_pred EEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCC-------CCEEEEEECC-CCceEEEEeCCCCCCcEEEEE
Confidence 9999985432 2221 1111111245666655444433221 12444 333 322222221 12234567777
Q ss_pred eCCCeEEEEeC--CeEEEEECCCC
Q 046773 393 MNQGYALMCVE--GVIRVWEVEGG 414 (453)
Q Consensus 393 ~~~~~lls~s~--~tIrlWD~~tG 414 (453)
++.+.+..+-. +.|..-|+...
T Consensus 180 ~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 180 YEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp TTTTEEEEEETTTCCEEEESSSCC
T ss_pred ccCCEEEEEeCCCCeEEEecCCCC
Confidence 77777765544 78888888643
Done!