BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046775
         (771 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/771 (77%), Positives = 672/771 (87%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT  KDL LG QVHGIVV TGFDSDEFVANSLV++YAKCG F D+R LFDAIP+RS
Sbjct: 16  VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRS 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+LFSCYVH D   EAV  F +MVLSGIRPNEFSLSSMIN C G  DS+ GRKIHG
Sbjct: 76  VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IKLGYDSD FSANALVDMYAKVG LEDA +VF +I  PDIVSWNA+IAGCVLHE++  
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHR 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L ++M  S + PNMFT +SALKACAGM L+ELGRQLH SLIKM++ SD  +GVGL+D
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC SMD+AR++F LMPE+++IAWN VISGH QN  D EAASLFP M+ EG+GF+QTT
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTT 315

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LSTVLKS+A+ QA  +C+Q+HALS+K+ FE D+Y+VNSLID YGKCGHVEDA ++F+ES 
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESP 375

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VDLV  TS++TAYAQ G GEEAL+LYLEMQDR I PDSFVCSSLLNACA+LSAYEQGKQ
Sbjct: 376 IVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQ 435

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VHVHI+KFGFMSD FAGNSLVNMYAKCGSI+DA  AFS IP RGIVSWSAMIGGLAQHG 
Sbjct: 436 VHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGY 495

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEALQ+F QML+ GV PNHITLVSVLCACNHAGLVAEAKH+F SM+  FGI+PMQEHYA
Sbjct: 496 GKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYA 555

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGRAGK + AMELV+ MPFQANA VWGALLGAARI+KN+++G+ AAEML A+EPE
Sbjct: 556 CMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPE 615

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           KS THVLL+NIYAS GMWD VA+VRR MKD K+KKEPGMSW+EVKDKVYTF VGDRSH+R
Sbjct: 616 KSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSR 675

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S EIYAKLDE+SDLL KAGYVPMVE DLHDVE SEKEQLLYHHSEKLAVAFGLIATPPGA
Sbjct: 676 STEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGA 735

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IRVKKNLRIC DCHT  +FISKIVSREIIVRD NRFHHFR GSCSCG YW
Sbjct: 736 PIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 161/494 (32%), Positives = 269/494 (54%), Gaps = 8/494 (1%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M L GI+ NEF+  S++ AC  + D +LG+++HG  +  G+DSD F AN+LV +YAK G 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
             DA ++F  I    +VSWNA+ +  V  + +  A+ LF  M  S I PN F+ +S +  
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C G+E    GR++H  LIK+   SD      LVDMYAK G +++A  +F  + + ++++W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I+G + +     A  L   M + G+  +  TLS+ LK+ A      + +Q+H+  +K
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
               SD ++   LID Y KC  ++DA  +FK     D++A  ++I+ ++Q    EEA  L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           +  M    I  +    S++L + A L A    +Q+H   +K GF  D +  NSL++ Y K
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG ++DA R F E P   +V +++++   AQ G+G+EAL+++ +M + G+ P+     S+
Sbjct: 361 CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420

Query: 507 LCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA--CMIDILGRAGKFQEAMELVDTMP 563
           L AC       + K  H   +  KFG   M + +A   ++++  + G  ++A      +P
Sbjct: 421 LNACASLSAYEQGKQVHVHIL--KFGF--MSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476

Query: 564 FQANASVWGALLGA 577
            +   S W A++G 
Sbjct: 477 VRGIVS-WSAMIGG 489


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score = 1208 bits (3125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/771 (74%), Positives = 672/771 (87%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+  KDL +G QVHG+VV +GF+ D FVAN+LVVMYAKC  F+DS+RLFD IPER+
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+LFSCYV  DF  EAV  F EMVLSGI+PNEFSLSSM+NAC G  DS  G+ IHG
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IKLGYD D FSANALVDMYAKVG+L DA++VF+ I+ PDIVSWNAVIAGCVLHEH++ 
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  QMK S I PN+FT +SALKACAGM LKELGRQLH SL+KM+++SD  V VGLVD
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  +++ARM F+L+PEK+LIAWN +ISG+ Q   DMEA SLF  M++EG+GF+QTT
Sbjct: 403 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 462

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LST+LKS A  Q + VC+QVH LSVK+ F SD Y+VNSLID+YGKC HVEDA +IF+E +
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 522

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV+ TSMITAYAQ+G GEEALKL+LEMQD E+ PD FVCSSLLNACANLSA+EQGKQ
Sbjct: 523 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 582

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +HVHI+K+GF+ D FAGNSLVNMYAKCGSIDDA RAFSE+ +RGIVSWSAMIGGLAQHG 
Sbjct: 583 LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGH 642

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++ALQ+F QML++GV PNHITLVSVL ACNHAGLV EAK +FESME+ FG +PMQEHYA
Sbjct: 643 GRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYA 702

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGRAGK  EA+ELV+ MPF+ANASVWGALLGAARI+K+VE+G+ AAEMLF +EPE
Sbjct: 703 CMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPE 762

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           KS THVLL+NIYASAG W+NVA+VRR M+D+K+KKEPGMSWIEVKDKVYTF VGDRSH R
Sbjct: 763 KSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYR 822

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S+EIYAKLDE+SDL++KAGYVPMVE DLHDVE+SEKE LLYHHSEKLAVAFGLIATP GA
Sbjct: 823 SQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGA 882

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IRVKKNLR+CVDCHT+F++I KIVSREIIVRD+NRFHHF++GSCSCG YW
Sbjct: 883 PIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 188/578 (32%), Positives = 310/578 (53%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C + K L  GLQ+H  +  +G   D  + N L+ +Y+KC NF  +R+L D   E  
Sbjct: 62  LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPD 121

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW++L S Y        A+  F EM L G++ NEF+ SS++ AC+   D  +G+++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G++ D+F AN LV MYAK     D+  +F +I   ++VSWNA+ +  V  +    
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE 241

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF +M  S I PN F+ +S + AC G+     G+ +H  LIK+    DP     LVD
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK G + +A  +F  + + ++++WN VI+G + +    +A  L   M R G+  +  T
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFT 361

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS+ LK+ A      + +Q+H+  +K   ESD ++   L+D Y KC  +EDA   F    
Sbjct: 362 LSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 421

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL+A  ++I+ Y+Q+    EAL L++EM    I  +    S++L + A L      +Q
Sbjct: 422 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 481

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K GF SD +  NSL++ Y KC  ++DA+R F E     +VS+++MI   AQ+G+
Sbjct: 482 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 541

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
           G+EAL++F +M +  + P+     S+L AC +     + K  H   ++  F +     + 
Sbjct: 542 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGN- 600

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             ++++  + G   +A      +  +   S W A++G 
Sbjct: 601 -SLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGG 636



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 227/414 (54%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P   S S +++ C  +     G +IH +  K G   D    N L+++Y+K  N   A  +
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
             +   PD+VSW+A+I+G   +     AL  F +M    +  N FT++S LKAC+ ++  
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            +G+Q+H  ++    + D  V   LV MYAKC    +++ +F  +PE+N+++WN + S +
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           +Q     EA  LF  M   G+  ++ +LS+++ +    +     K +H   +K  ++ D 
Sbjct: 234 VQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDP 293

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           +  N+L+D Y K G + DA+ +F++    D+V+  ++I         E+AL+L  +M+  
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRS 353

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I P+ F  SS L ACA +   E G+Q+H  ++K    SD F    LV+MY+KC  ++DA
Sbjct: 354 GICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 413

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
             AF+ +P++ +++W+A+I G +Q+    EAL +F +M ++G+  N  TL ++L
Sbjct: 414 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 467



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 67/142 (47%)

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I    QF    +   +   +      P S   S LL+ C    +   G Q+H HI K G
Sbjct: 27  LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D    N L+N+Y+KC +   A +   E  +  +VSWSA+I G AQ+G G  AL  F 
Sbjct: 87  LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146

Query: 490 QMLEDGVLPNHITLVSVLCACN 511
           +M   GV  N  T  SVL AC+
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACS 168


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score = 1160 bits (3000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/771 (71%), Positives = 647/771 (83%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+ K+DL +G +VHG+ V TGF+SD FVAN+LVVMYAKCG   DSRRLF  I ER+
Sbjct: 88  VLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERN 147

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+LFSCYV  +   EAV  FKEMV SGI PNEFS+S ++NACAG  +  LGRKIHG
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K+G D D FSANALVDMY+K G +E AVAVF+DI HPD+VSWNA+IAGCVLH+ ND 
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L  +MK S   PNMFT +SALKACA M  KELGRQLH SLIKM+  SD    VGLVD
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  MD+AR  +  MP+K++IAWN +ISG+ Q G  ++A SLF  M+ E + F+QTT
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LSTVLKSVAS QAI VCKQ+H +S+K+   SD Y++NSL+D YGKC H+++A KIF+E +
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT 447

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLVA TSMITAY+Q+G GEEALKLYL+MQD +I PD F+CSSLLNACANLSAYEQGKQ
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQ 507

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +HVH IKFGFM D FA NSLVNMYAKCGSI+DADRAFSEIP+RGIVSWSAMIGG AQHG 
Sbjct: 508 LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGH 567

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEAL++F QML DGV PNHITLVSVLCACNHAGLV E K +FE ME  FGI+P QEHYA
Sbjct: 568 GKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYA 627

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGR+GK  EA+ELV+++PF+A+  VWGALLGAARI+KN+E+GQ AA+MLF +EPE
Sbjct: 628 CMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPE 687

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           KS THVLL+NIYASAGMW+NVAKVR+FMKD+K+KKEPGMSWIE+KDKVYTF VGDRSH+R
Sbjct: 688 KSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSR 747

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S EIYAKLD++ DLL+KAGY  +VE D+H+V++SEKE+LLYHHSEKLAVAFGLIATPPG 
Sbjct: 748 SDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGG 807

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IRVKKNLRICVDCHT F+F+ KIVSREIIVRD+NRFHHF++GSCSCG YW
Sbjct: 808 PIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 187/564 (33%), Positives = 315/564 (55%), Gaps = 4/564 (0%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           +++H  ++  GF  D  + N LV +Y+KC  F  +R+L D   E  VVSW+SL S YV  
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
            F+EEA+  F EM L G++ NEF+  S++ AC+   D  +GRK+HG ++  G++SD F A
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           N LV MYAK G L+D+  +F  I   ++VSWNA+ +  V  E    A+ LF++M  S I 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           PN F+ +  L ACAG++  +LGR++H  ++KM +  D      LVDMY+K G ++ A  +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  +   ++++WN +I+G + +  +  A  L   M   G   +  TLS+ LK+ A+    
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            + +Q+H+  +K    SD +    L+D Y KC  ++DA + +      D++A  ++I+ Y
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           +Q G   +A+ L+ +M   +I+ +    S++L + A+L A +  KQ+H   IK G  SD 
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           +  NSL++ Y KC  ID+A + F E     +V++++MI   +Q+G G+EAL+++ QM + 
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            + P+     S+L AC +     + K  H  ++  KFG          ++++  + G  +
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAI--KFGFMCDIFASNSLVNMYAKCGSIE 538

Query: 554 EAMELVDTMPFQANASVWGALLGA 577
           +A      +P +   S W A++G 
Sbjct: 539 DADRAFSEIPNRGIVS-WSAMIGG 561


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score = 1155 bits (2988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/771 (72%), Positives = 650/771 (84%), Gaps = 27/771 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+  KDL +G QVHG+VV +GF+ D FVAN+LVVMYAKC  F+DS+RLFD IPER+
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+LFSCYV  DF  EAV  F EMVLSGI+PNEFSLSSM+NAC G  DS  G+ IHG
Sbjct: 223 VVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IKLGYD D FSANALVDMYAKVG+L DA++VF+ I+ PDIVSWNAVIAGCVLHEH++ 
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  QMK                           RQLH SL+KM+++SD  V VGLVD
Sbjct: 343 ALELLGQMK---------------------------RQLHSSLMKMDMESDLFVSVGLVD 375

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  +++ARM F+L+PEK+LIAWN +ISG+ Q   DMEA SLF  M++EG+GF+QTT
Sbjct: 376 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 435

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LST+LKS A  Q + VC+QVH LSVK+ F SD Y+VNSLID+YGKC HVEDA +IF+E +
Sbjct: 436 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 495

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV+ TSMITAYAQ+G GEEALKL+LEMQD E+ PD FVCSSLLNACANLSA+EQGKQ
Sbjct: 496 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 555

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +HVHI+K+GF+ D FAGNSLVNMYAKCGSIDDA RAFSE+ +RGIVSWSAMIGGLAQHG 
Sbjct: 556 LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGH 615

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++ALQ+F QML++GV PNHITLVSVL ACNHAGLV EAK +FESME+ FG +PMQEHYA
Sbjct: 616 GRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYA 675

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGRAGK  EA+ELV+ MPF+ANASVWGALLGAARI+K+VE+G+ AAEMLF +EPE
Sbjct: 676 CMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPE 735

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           KS THVLL+NIYASAG W+NVA+VRR M+D+K+KKEPGMSWIEVKDKVYTF VGDRSH R
Sbjct: 736 KSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYR 795

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S+EIYAKLDE+SDL++KAGYVPMVE DLHDVE+SEKE LLYHHSEKLAVAFGLIATP GA
Sbjct: 796 SQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGA 855

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IRVKKNLR+CVDCHT+F++I KIVSREIIVRD+NRFHHF++GSCSCG YW
Sbjct: 856 PIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/578 (31%), Positives = 296/578 (51%), Gaps = 31/578 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C + K L  GLQ+H  +  +G   D  + N L+ +Y+KC  F  +R+L D   E  
Sbjct: 62  LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPD 121

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW++L S Y        A+  F EM L G++ NEF+ SS++ AC+   D  +G+++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G++ D+F AN LV MYAK     D+  +F +I   ++VSWNA+ +  V  +    
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE 241

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF +M  S I PN F+ +S + AC G+     G+ +H  LIK+    DP     LVD
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK G + +A  +F  + + ++++WN VI+G + +    +A  L   M R         
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR--------- 352

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
                             Q+H+  +K   ESD ++   L+D Y KC  +EDA   F    
Sbjct: 353 ------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 394

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL+A  ++I+ Y+Q+    EAL L++EM    I  +    S++L + A L      +Q
Sbjct: 395 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 454

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K GF SD +  NSL++ Y KC  ++DA+R F E     +VS+++MI   AQ+G+
Sbjct: 455 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 514

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
           G+EAL++F +M +  + P+     S+L AC +     + K  H   ++  F +     + 
Sbjct: 515 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGN- 573

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             ++++  + G   +A      +  +   S W A++G 
Sbjct: 574 -SLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGG 609



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 213/414 (51%), Gaps = 27/414 (6%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P   S S +++ C  +     G +IH +  K G   D    N L+++Y+K      A  +
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
             +   PD+VSW+A+I+G   +     AL  F +M    +  N FT++S LKAC+ ++  
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            +G+Q+H  ++    + D  V   LV MYAKC    +++ +F  +PE+N+++WN + S +
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           +Q     EA  LF  M   G+  ++ +LS+++ +    +     K +H   +K  ++ D 
Sbjct: 234 VQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDP 293

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           +  N+L+D Y K G + DA+ +F++    D+V+  ++I         E+AL+L  +M+  
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK-- 351

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
                                    +Q+H  ++K    SD F    LV+MY+KC  ++DA
Sbjct: 352 -------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 386

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
             AF+ +P++ +++W+A+I G +Q+    EAL +F +M ++G+  N  TL ++L
Sbjct: 387 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 440



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 66/142 (46%)

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I    QF    +   +   +      P S   S LL+ C    +   G Q+H HI K G
Sbjct: 27  LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D    N L+N+Y+KC     A +   E  +  +VSWSA+I G AQ+G G  AL  F 
Sbjct: 87  LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146

Query: 490 QMLEDGVLPNHITLVSVLCACN 511
           +M   GV  N  T  SVL AC+
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACS 168


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score = 1042 bits (2694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/806 (63%), Positives = 615/806 (76%), Gaps = 43/806 (5%)

Query: 6   TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWN 65
           T+ KD+  G+ +H  ++         + N LV +Y+KC  F  +R+L     E  +VSW+
Sbjct: 61  TASKDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWS 117

Query: 66  SLFSCYVHCDFLEEA----------------------------------------VCFFK 85
           +L S YV     EEA                                        V    
Sbjct: 118 ALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVT 177

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           EM+ +GI PNEFSLS+++NACAG  D   G K+HGY IKLGYDSD FSANAL+DMYAK G
Sbjct: 178 EMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSG 237

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
             E A+AVF +I  PDIVSWNAVIAGCVLHE ND ALKL  +M S  + P+MFT +SALK
Sbjct: 238 CPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALK 297

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           ACA + L +LGRQLH +L+KM+++ D  VGVGL+DMY+KCG + +ARM+F LMP K++I 
Sbjct: 298 ACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIV 357

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +ISG+   G D+EA SLF  MY+EG+ F+QTTLST+LKS A  QA G C+QVH +S+
Sbjct: 358 WNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISI 417

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K+ ++ D Y+ NSL+D+YGKC  +EDA K+F+   A DLVA TSMITAY+Q+GLGEEALK
Sbjct: 418 KSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALK 477

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +YL MQDR+I PD+F+ SSL NACANLSAYEQGKQ+HVH++K G +SD FAGNSLVNMYA
Sbjct: 478 MYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYA 537

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCGSIDDA   F+EI  RGIVSWSAMIGGLAQHG G++ALQ+F QML++G+LPNHITLVS
Sbjct: 538 KCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVS 597

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL ACNHAGLV EA+  F  MEK FGI P QEHYACM+DILGR G+  EAM LV  MPFQ
Sbjct: 598 VLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQ 657

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
           A+A+VWGALLGAARI+KN+E+G+HAAEML  +EPEKS TH+LL+NIYAS GMWDNVAKVR
Sbjct: 658 ASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVR 717

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           R MK++ +KKEPGMSWIE+KDKVYTF VGDRSH RSKEIY KLD++ + L  AGYVPM+E
Sbjct: 718 RSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIE 777

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
           TDLHDVE+ EKEQLL+HHSEKLAVAFGLIATPPGA IRVKKNLR+C+DCHT+F+FISK+ 
Sbjct: 778 TDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVA 837

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
           SREIIVRD+NRFHHFR+GSCSCG YW
Sbjct: 838 SREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 163/541 (30%), Positives = 272/541 (50%), Gaps = 19/541 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC   +D   G++VHG ++  G+DSD F AN+L+ MYAK G    +  +F  IP+  
Sbjct: 194 VLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPD 253

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++ +  V  +  + A+    +M    + P+ F+LSS + ACA  G   LGR++H 
Sbjct: 254 IVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHS 313

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K+  + D F    L+DMY+K G L+DA  VF  +   D++ WN++I+G     ++  
Sbjct: 314 ALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIE 373

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF  M    +  N  T ++ LK+ AG +      Q+H   IK   + D  V   L+D
Sbjct: 374 AMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLD 433

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC  +++A  +F + P ++L+A+  +I+ + Q G   EA  ++  M    +  D   
Sbjct: 434 SYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFI 493

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S++  + A+  A    KQ+H   +K    SD +  NSL++ Y KCG ++DA  IF E S
Sbjct: 494 FSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEIS 553

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+ ++MI   AQ G G +AL+L+ +M    I P+     S+L+AC +     + ++
Sbjct: 554 WRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARR 613

Query: 421 VHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMI 472
                  FG M   F           +V++  + G +D+A     E+P +   + W A++
Sbjct: 614 F------FGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667

Query: 473 GGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE-SMEK 528
           G    H     G+ A +M    LE      HI L ++  +      VA+ +   + S+ K
Sbjct: 668 GAARIHKNIELGRHAAEML-LTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVK 726

Query: 529 K 529
           K
Sbjct: 727 K 727


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/763 (60%), Positives = 588/763 (77%), Gaps = 1/763 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLF-DAIPERSVVSWNSLF 68
           D  LG QVH + + TGF SD FVAN+LV MY   G   D+RR+F +A  ER+ VSWN L 
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S YV  D   +A+  F EMV SGI+P EF  S ++NAC GS +   GR++H   +++GYD
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY K+G ++ A  +F+ +   D+VSWNA+I+GCVL+ H+  A++L  QM
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           K S + PN+FT +S LKAC+G    +LGRQ+H  +IK    SD  +GVGLVDMYAK   +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D+AR +F  M  ++LI  N +ISG    G   EA SLF  + +EG+G ++TTL+ VLKS 
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           AS +A    +QVHAL+VK  F  D ++VN LID+Y KC  + DA ++F+E S+ D++ACT
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SMITA +Q   GE A+KL++EM  + + PD FV SSLLNACA+LSAYEQGKQVH H+IK 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            FMSD FAGN+LV  YAKCGSI+DA+ AFS +P+RG+VSWSAMIGGLAQHG GK AL++F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           G+M+++G+ PNHIT+ SVLCACNHAGLV EAK +F SM++ FGI   +EHY+CMID+LGR
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  +AMELV++MPFQANAS+WGALLGA+R++K+ E+G+ AAE LF +EPEKS THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           +N YASAGMW+ VAKVR+ MKD+ +KKEP MSWIEVKDKV+TF VGD+SH  +KEIYAKL
Sbjct: 715 ANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL 774

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
            E+ DL++KAG+VP V+ DLHD++ SEKE LL HHSE+LAVAF L++TPPGA IRVKKNL
Sbjct: 775 VELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 834

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RIC DCH +F+FISKIVSREII+RD+NRFHHFR+G+CSCG YW
Sbjct: 835 RICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 190/638 (29%), Positives = 330/638 (51%), Gaps = 20/638 (3%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L  G  +H  ++ +G  S     N L+  Y+KC     +RR+FD IP+   VSW+SL + 
Sbjct: 20  LLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTA 77

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y +      A+  F  M   G+  NEF+L  ++       D+ LG ++H  ++  G+ SD
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATGFGSD 134

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           +F ANALV MY   G ++DA  VF + +   + VSWN +++  V ++    A+++F +M 
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
            S I P  F ++  + AC G    E GRQ+H  +++M    D      LVDMY K G +D
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A +IF  MP+ ++++WN +ISG + NG D  A  L   M   G+  +  TLS++LK+ +
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACS 314

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A  + +Q+H   +K   +SDDYI   L+D Y K   ++DA K+F      DL+ C +
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNA 374

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I+  +  G  +EAL L+ E++   +  +    +++L + A+L A    +QVH   +K G
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIG 434

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F+ D    N L++ Y KC  + DA+R F E     I++ ++MI  L+Q   G+ A+++F 
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFM 494

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA--CMIDIL 546
           +ML  G+ P+   L S+L AC       + K  H   ++++F    M + +A   ++   
Sbjct: 495 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTY 550

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTH 605
            + G  ++A     ++P +   S W A++G    + +   G+ A E+   +  E  +  H
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 606

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
           + ++++  +      V + +R+   N +K+  G+   E
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYF--NSMKEMFGIDRTE 642



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 169/480 (35%), Positives = 256/480 (53%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +++  G QVH +VV  G+D D F AN+LV MY K G    +  +F+ +P+  
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L S  V       A+    +M  SG+ PN F+LSS++ AC+G+G   LGR+IHG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   DSD +    LVDMYAK   L+DA  VF  + H D++  NA+I+GC     +D 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +++   +  N  T  + LK+ A +E     RQ+H   +K+    D  V  GL+D
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC  + +A  +F      ++IA   +I+   Q      A  LF  M R+G+  D   
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L + AS  A    KQVHA  +K  F SD +  N+L+  Y KCG +EDA   F    
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+ ++MI   AQ G G+ AL+L+  M D  INP+    +S+L AC +    ++ K+
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
               + + FG        + ++++  + G +DDA    + +P +   S W A++G    H
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S  L   A   A   G  +H  ++K G ++ +F  N L++ Y+KC     A R F EIPD
Sbjct: 8   SQQLTRYAAAQALLPGAHLHASLLKSGSLA-SFR-NHLISFYSKCRRPCCARRVFDEIPD 65

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
              VSWS+++   + +G  + A+Q F  M  +GV  N   L  VL     A L A+   H
Sbjct: 66  PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV--H 123

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
             +M   FG      +   ++ + G  G   +A  + +    + NA  W  L+ A    K
Sbjct: 124 AMAMATGFGSDVFVAN--ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA--YVK 179

Query: 583 NVEVG---QHAAEMLFA-IEPEK 601
           N + G   Q   EM+++ I+P +
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTE 202


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/763 (60%), Positives = 588/763 (77%), Gaps = 1/763 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLF-DAIPERSVVSWNSLF 68
           D  LG QVH + + TGF SD FVAN+LV MY   G   D+RR+F +A  ER+ VSWN L 
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S YV  D   +A+  F EMV SGI+P EF  S ++NAC GS +   GR++H   +++GYD
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY K+G ++ A  +F+ +   D+VSWNA+I+GCVL+ H+  A++L  QM
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           K S + PN+FT +S LKAC+G    +LGRQ+H  +IK    SD  +GVGLVDMYAK   +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D+AR +F  M  ++LI  N +ISG    G   EA SLF  + +EG+G ++TTL+ VLKS 
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           AS +A    +QVHAL+VK  F  D ++VN LID+Y KC  + DA ++F+E S+ D++ACT
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SMITA +Q   GE A+KL++EM  + + PD FV SSLLNACA+LSAYEQGKQVH H+IK 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            FMSD FAGN+LV  YAKCGSI+DA+ AFS +P+RG+VSWSAMIGGLAQHG GK AL++F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           G+M+++G+ PNHIT+ SVLCACNHAGLV EAK +F SM++ FGI   +EHY+CMID+LGR
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  +AMELV++MPFQANAS+WGALLGA+R++K+ E+G+ AAE LF +EPEKS THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           +N YASAGMW+ VAKVR+ MKD+ +KKEP MSWIEVKDKV+TF VGD+SH  +KEIYAKL
Sbjct: 715 ANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL 774

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
            E+ DL++KAG+VP V+ DLHD++ SEKE LL HHSE+LAVAF L++TPPGA IRVKKNL
Sbjct: 775 VELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 834

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RIC DCH +F+FISKIVSREII+RD+NRFHHFR+G+CSCG YW
Sbjct: 835 RICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 190/638 (29%), Positives = 329/638 (51%), Gaps = 20/638 (3%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L  G  +H  ++ +G  S     N L+  Y+KC     +RR FD IP+   VSW+SL + 
Sbjct: 20  LLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTA 77

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y +      A+  F  M   G+  NEF+L  ++       D+ LG ++H  ++  G+ SD
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATGFGSD 134

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           +F ANALV MY   G ++DA  VF + +   + VSWN +++  V ++    A+++F +M 
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
            S I P  F ++  + AC G    E GRQ+H  +++M    D      LVDMY K G +D
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A +IF  MP+ ++++WN +ISG + NG D  A  L   M   G+  +  TLS++LK+ +
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACS 314

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A  + +Q+H   +K   +SDDYI   L+D Y K   ++DA K+F      DL+ C +
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNA 374

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I+  +  G  +EAL L+ E++   +  +    +++L + A+L A    +QVH   +K G
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIG 434

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F+ D    N L++ Y KC  + DA+R F E     I++ ++MI  L+Q   G+ A+++F 
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFM 494

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA--CMIDIL 546
           +ML  G+ P+   L S+L AC       + K  H   ++++F    M + +A   ++   
Sbjct: 495 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTY 550

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTH 605
            + G  ++A     ++P +   S W A++G    + +   G+ A E+   +  E  +  H
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 606

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
           + ++++  +      V + +R+   N +K+  G+   E
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYF--NSMKEMFGIDRTE 642



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 169/480 (35%), Positives = 256/480 (53%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +++  G QVH +VV  G+D D F AN+LV MY K G    +  +F+ +P+  
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L S  V       A+    +M  SG+ PN F+LSS++ AC+G+G   LGR+IHG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   DSD +    LVDMYAK   L+DA  VF  + H D++  NA+I+GC     +D 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +++   +  N  T  + LK+ A +E     RQ+H   +K+    D  V  GL+D
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC  + +A  +F      ++IA   +I+   Q      A  LF  M R+G+  D   
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L + AS  A    KQVHA  +K  F SD +  N+L+  Y KCG +EDA   F    
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+ ++MI   AQ G G+ AL+L+  M D  INP+    +S+L AC +    ++ K+
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
               + + FG        + ++++  + G +DDA    + +P +   S W A++G    H
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S  L   A   A   G  +H  ++K G ++ +F  N L++ Y+KC     A R F EIPD
Sbjct: 8   SQQLTRYAAAQALLPGAHLHASLLKSGSLA-SFR-NHLISFYSKCRRPCCARRFFDEIPD 65

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
              VSWS+++   + +G  + A+Q F  M  +GV  N   L  VL     A L A+   H
Sbjct: 66  PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV--H 123

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
             +M   FG      +   ++ + G  G   +A  + +    + NA  W  L+ A    K
Sbjct: 124 AMAMATGFGSDVFVAN--ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA--YVK 179

Query: 583 NVEVG---QHAAEMLFA-IEPEK 601
           N + G   Q   EM+++ I+P +
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTE 202


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  948 bits (2450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/763 (59%), Positives = 587/763 (76%), Gaps = 1/763 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLF 68
           D  LG QVH + + TGF SD FVAN+LV MY   G   D+RR+FD A  ER+ VSWN L 
Sbjct: 22  DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S YV  D   +A+  F EMV SGI+P EF  S ++NAC GS +   GR++H   +++GY+
Sbjct: 82  SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY K+G ++ A  +F+ +   D+VSWNA+I+GCVL+ H+  A++L  QM
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           KSS + PN+F  +S LKACAG    +LGRQ+H  +IK    SD  +GVGLVDMYAK   +
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 261

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D+A  +F  M  ++LI WN +ISG    G   EA S+F  + +EG+G ++TTL+ VLKS 
Sbjct: 262 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 321

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           AS +A    +QVHAL+ K  F  D ++VN LID+Y KC  + DA+++F+E S+ D++A T
Sbjct: 322 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 381

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SMITA +Q   GE A+KL++EM  + + PD FV SSLLNACA+LSAYEQGKQVH H+IK 
Sbjct: 382 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 441

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            FMSD FAGN+LV  YAKCGSI+DA+ AFS +P+RG+VSWSAMIGGLAQHG GK AL++F
Sbjct: 442 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 501

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           G+M+++G+ PNHIT+ SVLCACNHAGLV EAK +F SM++ FGI   +EHY+CMID+LGR
Sbjct: 502 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 561

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  +AMELV++MPFQANASVWGALLGA+R++K+ E+G+ AAE LF +EPEKS THVLL
Sbjct: 562 AGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 621

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           +N YAS+GMW+ VAKVR+ MKD+ +KKEP MSW+EVKDKV+TF VGD+SH  +KEIY+KL
Sbjct: 622 ANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKL 681

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
           DE+ DL++KAGY+P V+ DLHD++ SEKE LL HHSE+LAVAF L++TPPGA IRVKKNL
Sbjct: 682 DELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 741

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RIC DCH +F+FIS IVSREII+RD+NRFHHFR+G+CSCG YW
Sbjct: 742 RICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/480 (35%), Positives = 254/480 (52%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +++  G QVH +VV  G++ D F AN+LV MY K G    +  +F+ +P+  
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L S  V       A+    +M  SG+ PN F LSS++ ACAG+G   LGR+IHG
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 234

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   DSD +    LVDMYAK   L+DA+ VF  + H D++ WNA+I+GC     +D 
Sbjct: 235 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 294

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  +F  ++   +  N  T  + LK+ A +E     RQ+H    K+    D  V  GL+D
Sbjct: 295 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 354

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC  + +A  +F      ++IA   +I+   Q      A  LF  M R+G+  D   
Sbjct: 355 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 414

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L + AS  A    KQVHA  +K  F SD +  N+L+  Y KCG +EDA   F    
Sbjct: 415 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 474

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+ ++MI   AQ G G+ AL+L+  M D  INP+    +S+L AC +    ++ K+
Sbjct: 475 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 534

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
               + + FG        + ++++  + G +DDA    + +P +   S W A++G    H
Sbjct: 535 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/763 (59%), Positives = 587/763 (76%), Gaps = 1/763 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLF 68
           D  LG QVH + + TGF SD FVAN+LV MY   G   D+RR+FD A  ER+ VSWN L 
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S YV  D   +A+  F EMV SGI+P EF  S ++NAC GS +   GR++H   +++GY+
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY K+G ++ A  +F+ +   D+VSWNA+I+GCVL+ H+  A++L  QM
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           KSS + PN+F  +S LKACAG    +LGRQ+H  +IK    SD  +GVGLVDMYAK   +
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D+A  +F  M  ++LI WN +ISG    G   EA S+F  + +EG+G ++TTL+ VLKS 
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           AS +A    +QVHAL+ K  F  D ++VN LID+Y KC  + DA+++F+E S+ D++A T
Sbjct: 415 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 474

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SMITA +Q   GE A+KL++EM  + + PD FV SSLLNACA+LSAYEQGKQVH H+IK 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            FMSD FAGN+LV  YAKCGSI+DA+ AFS +P+RG+VSWSAMIGGLAQHG GK AL++F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           G+M+++G+ PNHIT+ SVLCACNHAGLV EAK +F SM++ FGI   +EHY+CMID+LGR
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  +AMELV++MPFQANASVWGALLGA+R++K+ E+G+ AAE LF +EPEKS THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           +N YAS+GMW+ VAKVR+ MKD+ +KKEP MSW+EVKDKV+TF VGD+SH  +KEIY+KL
Sbjct: 715 ANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKL 774

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
           DE+ DL++KAGY+P V+ DLHD++ SEKE LL HHSE+LAVAF L++TPPGA IRVKKNL
Sbjct: 775 DELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 834

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RIC DCH +F+FIS IVSREII+RD+NRFHHFR+G+CSCG YW
Sbjct: 835 RICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 193/671 (28%), Positives = 342/671 (50%), Gaps = 29/671 (4%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L  G  +H  ++ +GF +   + N L+  Y+KC     +RR+FD IP+   VSW+SL + 
Sbjct: 20  LLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTA 77

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y +      A+  F  M   G+  NEF+L  ++       D+ LG ++H  ++  G+ SD
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFGSD 134

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           +F ANALV MY   G ++DA  VF +     + VSWN +++  V ++    A+++F +M 
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
            S I P  F ++  + AC G    + GRQ+H  +++M  + D      LVDMY K G +D
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD 254

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A +IF  MP+ ++++WN +ISG + NG D  A  L   M   G+  +   LS++LK+ A
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACA 314

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A  + +Q+H   +K   +SDDYI   L+D Y K   ++DA+K+F   S  DL+   +
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNA 374

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I+  +  G  +EA  ++  ++   +  +    +++L + A+L A    +QVH    K G
Sbjct: 375 LISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG 434

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F+ D    N L++ Y KC  + DA R F E     I++ ++MI  L+Q   G+ A+++F 
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFM 494

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA--CMIDIL 546
           +ML  G+ P+   L S+L AC       + K  H   ++++F    M + +A   ++   
Sbjct: 495 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTY 550

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTH 605
            + G  ++A     ++P +   S W A++G    + +   G+ A E+   +  E  +  H
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 606

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           + ++++  +      V + +R+   N +K+   M  I+  ++ Y+  +     A      
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYF--NSMKE---MFGIDRTEEHYSCMIDLLGRA------ 655

Query: 666 AKLDEVSDLLN 676
            KLD+  +L+N
Sbjct: 656 GKLDDAMELVN 666



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/480 (35%), Positives = 254/480 (52%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +++  G QVH +VV  G++ D F AN+LV MY K G    +  +F+ +P+  
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L S  V       A+    +M  SG+ PN F LSS++ ACAG+G   LGR+IHG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   DSD +    LVDMYAK   L+DA+ VF  + H D++ WNA+I+GC     +D 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 387

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  +F  ++   +  N  T  + LK+ A +E     RQ+H    K+    D  V  GL+D
Sbjct: 388 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 447

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC  + +A  +F      ++IA   +I+   Q      A  LF  M R+G+  D   
Sbjct: 448 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L + AS  A    KQVHA  +K  F SD +  N+L+  Y KCG +EDA   F    
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+ ++MI   AQ G G+ AL+L+  M D  INP+    +S+L AC +    ++ K+
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
               + + FG        + ++++  + G +DDA    + +P +   S W A++G    H
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S  L   A   A   G  +H +++K GF++     N L++ Y+KC     A R F EIPD
Sbjct: 8   SQQLTRYAAAQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPD 65

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
              VSWS+++   + +G  + A+Q F  M  +GV  N   L  VL     A L A+   H
Sbjct: 66  PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQV--H 123

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
             +M   FG      +   ++ + G  G   +A  + D    + NA  W  L+ A    K
Sbjct: 124 AMAMATGFGSDVFVAN--ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA--YVK 179

Query: 583 NVEVG---QHAAEMLFA-IEPEK 601
           N + G   Q   EM+++ I+P +
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTE 202


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/768 (59%), Positives = 583/768 (75%), Gaps = 6/768 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI----PERSVVSWN 65
           D+  G QVH + V T    D FVAN+LV +Y   G   ++RR+FD       ER+ VSWN
Sbjct: 115 DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWN 174

Query: 66  SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
           ++ S YV  D   +A+  F+EMV SG RPNEF  S ++NAC GS D   GR++HG  ++ 
Sbjct: 175 TMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT 234

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           GY+ D+F+ANALVDMY+K+G++E A  VF+ +   D+VSWNA I+GCV H H+  AL+L 
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            QMKSS + PN+FT +S LKACAG     LGRQ+H  ++K     D  V VGLVDMYAK 
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD--QTTLST 303
           G +D+AR +F  MP ++LI WN +ISG   +G   E  SLF  M +EG+  D  +TTL++
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           VLKS AS +AI   +QVHAL+ K    SD +++N LID+Y KCG ++ A+K+FKES + D
Sbjct: 415 VLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDD 474

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           +++ T+M+TA +Q   GE+A+KL+++M  + + PDSFV SSLLNAC +LSAYEQGKQVH 
Sbjct: 475 IISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHA 534

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
           H+IK  F SD FAGN+LV  YAKCGSI+DAD AFS +P+RGIVSWSAMIGGLAQHG GK 
Sbjct: 535 HLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKR 594

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL +F +ML++GV PNHITL SVL ACNHAGLV +AK +FESM++ FGI   +EHYACMI
Sbjct: 595 ALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMI 654

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           DILGRAGK ++AMELV+ MPFQANA+VWGALLGA+R++++ E+G+ AAE LF +EPEKS 
Sbjct: 655 DILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSG 714

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
           THVLL+N YASAGMWD +AKVR+ MKD+ +KKEP MSW+E+KDKV+TF VGD+SH  +++
Sbjct: 715 THVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRD 774

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           IY KL E+ DL+NKAGYVP VE DLHDV+ SEKE LL HHSE+LAVAF LI+TP GA IR
Sbjct: 775 IYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIR 834

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           VKKNLRIC DCH +F++ISKIVSREII+RD+NRFHHF NG+CSCG YW
Sbjct: 835 VKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 176/502 (35%), Positives = 265/502 (52%), Gaps = 17/502 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +DL  G QVHG VV TG++ D F AN+LV MY+K G+   +  +F+ +P   
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+  S  V       A+    +M  SG+ PN F+LSS++ ACAG+G   LGR+IHG
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K   D D F A  LVDMYAK G L+DA  VF  +   D++ WNA+I+GC     +  
Sbjct: 331 FMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 390

Query: 181 ALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            L LF +M+    +++ N  T  S LK+ A  E     RQ+H    K+ + SD  V  GL
Sbjct: 391 VLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGL 450

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y KCG +D A  +F      ++I+   +++   Q     +A  LF  M R+G+  D 
Sbjct: 451 IDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDS 510

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             LS++L +  S  A    KQVHA  +K  F SD +  N+L+ AY KCG +EDA   F  
Sbjct: 511 FVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSG 570

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +V+ ++MI   AQ G G+ AL L+  M D  + P+    +S+L+AC +    +  
Sbjct: 571 LPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDA 630

Query: 419 KQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIPDRGIVS-WSA 470
           K+       F  M +TF  +        ++++  + G ++DA    + +P +   + W A
Sbjct: 631 KKY------FESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGA 684

Query: 471 MIGGLAQHGRGKEALQMFGQML 492
           ++G    H R  E  +M  + L
Sbjct: 685 LLGASRVH-RDPELGRMAAEKL 705



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 179/636 (28%), Positives = 322/636 (50%), Gaps = 22/636 (3%)

Query: 7   SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS 66
           + + LF G  +H  ++ +G  +    +N L+ +Y++C     +R +FD IP+   VSW+S
Sbjct: 16  TSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSS 73

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           L + Y +     +A+  F+ M   G+  NEF+L  ++  CA   D   G ++H  ++   
Sbjct: 74  LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA--PDVRFGAQVHALAVATR 130

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDI----EHPDIVSWNAVIAGCVLHEHNDWAL 182
              D+F ANALV +Y   G +++A  +F +        + VSWN +I+  V ++ +  A+
Sbjct: 131 LVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAI 190

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
            +F++M  S   PN F ++  + AC G    E GRQ+H ++++   + D      LVDMY
Sbjct: 191 GVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMY 250

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           +K G ++ A  +F  MP  ++++WN  ISG + +G D  A  L   M   G+  +  TLS
Sbjct: 251 SKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLS 310

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           +VLK+ A   A  + +Q+H   VK   + D+++   L+D Y K G ++DA K+F      
Sbjct: 311 SVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR 370

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQ 420
           DL+   ++I+  +  G   E L L+  M+   ++ D      +S+L + A+  A    +Q
Sbjct: 371 DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQ 430

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH    K G +SD+   N L++ Y KCG +D A + F E     I+S + M+  L+Q   
Sbjct: 431 VHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDH 490

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
           G++A+++F QML  G+ P+   L S+L AC       + K  H   ++++F       + 
Sbjct: 491 GEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGN- 549

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             ++    + G  ++A      +P +   S W A++G    + +   G+ A ++   +  
Sbjct: 550 -ALVYAYAKCGSIEDADMAFSGLPERGIVS-WSAMIGGLAQHGH---GKRALDLFHRMLD 604

Query: 600 EK-SSTHVLLSNIYAS---AGMWDNVAKVRRFMKDN 631
           E  +  H+ L+++ ++   AG+ D+  K    MK+ 
Sbjct: 605 EGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKET 640


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  935 bits (2416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/763 (59%), Positives = 577/763 (75%), Gaps = 1/763 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLF 68
           D   G Q+H + + TG   D FVAN+LV MY   G   ++R +FD A  ER+ VSWN L 
Sbjct: 115 DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLM 174

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S YV  D    AV  F EMV  G++PNEF  S ++NAC GS D   GRK+H   I+ GYD
Sbjct: 175 SAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD 234

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY+K+G++  A  VF  +   D+VSWNA I+GCVLH H+  AL+L  QM
Sbjct: 235 KDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           KSS + PN+FT +S LKACAG     LGRQ+H  ++K    SD  +  GLVDMYAK G +
Sbjct: 295 KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLL 354

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D+A+ +F  +P+++L+ WN +ISG        EA SLF  M +EG   ++TTL+ VLKS 
Sbjct: 355 DDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKST 414

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           AS +AI   +QVHAL+ K  F SD ++VN LID+Y KC  +  A ++F++  + D++A T
Sbjct: 415 ASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFT 474

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SMITA +Q   GE+A+KL++EM  + ++PD FV SSLLNACA+LSAYEQGKQVH H+IK 
Sbjct: 475 SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            FMSD FAGN+LV  YAKCGSI+DAD AFS +P++G+VSWSAMIGGLAQHG GK AL +F
Sbjct: 535 QFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVF 594

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
            +M+++ + PNHIT+ SVLCACNHAGLV EAK +F SM++ FGI+  +EHYACMID+LGR
Sbjct: 595 HRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGR 654

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  +AMELV++MPFQ NA+VWGALL A+R++++ E+G+ AAE LF +EPEKS THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLL 714

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           +N YASAGMWD+VAKVR+ MKD+K+KKEP MSW+E+KDKV+TF VGD+SH R+++IYAKL
Sbjct: 715 ANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKL 774

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
           DE+ DL+ KAGYVP VE DLHDV+++EKE LL HHSE+LAVAF LI+TP GA IRVKKNL
Sbjct: 775 DELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNL 834

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RIC DCH +F+FIS IVSREII+RD+NRFHHFR+G+CSC  YW
Sbjct: 835 RICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/480 (35%), Positives = 256/480 (53%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +DL  G +VH +V+ TG+D D F AN+LV MY+K G+   +  +F  +PE  
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+  S  V     + A+    +M  SG+ PN F+LSS++ ACAGSG   LGR+IHG
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHG 327

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K   DSD + A  LVDMYAK G L+DA  VF  I   D+V WNA+I+GC     +  
Sbjct: 328 FMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAE 387

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M+    + N  T  + LK+ A +E     RQ+H    K+   SD  V  GL+D
Sbjct: 388 ALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLID 447

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC  ++ A  +F      ++IA+  +I+   Q     +A  LF  M R+G+  D   
Sbjct: 448 SYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFV 507

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L + AS  A    KQVHA  +K  F SD +  N+L+  Y KCG +EDA   F    
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP 567

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+ ++MI   AQ G G+ AL ++  M D  I+P+    +S+L AC +    ++ K+
Sbjct: 568 EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               + + FG          ++++  + G +DDA    + +P       W A++     H
Sbjct: 628 YFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 191/681 (28%), Positives = 340/681 (49%), Gaps = 29/681 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L    + + L  G  +H  ++ +G  +     N L+  Y+KC     +RR+FD IP+  
Sbjct: 10  LLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPC 67

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+SL + Y +     +A+  F+ M    +R NEF L  ++     +G    G ++H 
Sbjct: 68  HVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHA 124

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
            ++  G   D+F ANALV MY   G +++A  VF +     + VSWN +++  V ++   
Sbjct: 125 LAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCS 184

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+K+F +M    + PN F ++  + AC G    E GR++H  +I+     D      LV
Sbjct: 185 HAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALV 244

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+K G +  A ++F  +PE ++++WN  ISG + +G D  A  L   M   G+  +  
Sbjct: 245 DMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVF 304

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS++LK+ A   A  + +Q+H   VK   +SD+YI   L+D Y K G ++DA K+F   
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              DLV   ++I+  +      EAL L+  M+    + +    +++L + A+L A    +
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           QVH    K GF+SD+   N L++ Y KC  ++ A R F +     I+++++MI  L+Q  
Sbjct: 425 QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCD 484

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
            G++A+++F +ML  G+ P+   L S+L AC       + K  H   ++++F    M + 
Sbjct: 485 HGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----MSDV 540

Query: 539 YA--CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +A   ++    + G  ++A      +P +   S W A++G    + +   G+ A ++   
Sbjct: 541 FAGNALVYTYAKCGSIEDADLAFSGLPEKGVVS-WSAMIGGLAQHGH---GKRALDVFHR 596

Query: 597 IEPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           +  E  S  H+ ++++  +      V + +R+   N +K+   M  IE  ++ Y   +  
Sbjct: 597 MVDEHISPNHITMTSVLCACNHAGLVDEAKRYF--NSMKE---MFGIERTEEHYACMIDL 651

Query: 656 RSHARSKEIYAKLDEVSDLLN 676
              A       KLD+  +L+N
Sbjct: 652 LGRA------GKLDDAMELVN 666


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/765 (59%), Positives = 581/765 (75%), Gaps = 3/765 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLF 68
           D  LG+QVH + V TG   D FVAN+LV MY   G   ++RR+FD A  +R+ VSWN + 
Sbjct: 115 DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S +V  D   +AV  F EMV SG+RPNEF  S ++NAC GS D   GRK+H   ++ GYD
Sbjct: 175 SAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYD 234

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY+K+G++  A  VF  +   D+VSWNA I+GCVLH H+  AL+L  QM
Sbjct: 235 KDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 189 KSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           KSS + PN+FT +S LKACAG         RQ+H  +IK    SD  +GV LVDMYAK G
Sbjct: 295 KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +D+AR +F  +P K+L+ WN +ISG    G   E+ SLF  M +EG   ++TTL+ VLK
Sbjct: 355 LLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLK 414

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S AS +AI    QVHAL+ K  F SD ++VN LID+Y KC  +  A K+F+E S+ +++A
Sbjct: 415 STASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIA 474

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            TSMITA +Q   GE+A+KL++EM  + + PD FV SSLLNACA+LSAYEQGKQVH H+I
Sbjct: 475 FTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 534

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K  FM+D FAGN+LV  YAKCGSI+DAD AFS +PD+G+VSWSAMIGGLAQHG GK AL 
Sbjct: 535 KRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALD 594

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F +M+++ + PNHITL SVLCACNHAGLV EAK +F SM++ FGI   +EHY+CMID+L
Sbjct: 595 VFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLL 654

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAGK  +AMELV++MPF+ANA+VWGALL A+R++++ E+G+ AAE LF +EPEKS THV
Sbjct: 655 GRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHV 714

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           LL+N YASAGMWD VAKVR+ MKD+K+KKEP MSW+E+KD+V+TF VGD+SH R+++IYA
Sbjct: 715 LLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYA 774

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           KL+E+ DL++KAGYVP +E DLHDV++SEKE LL HHSE+LAVAF LI+TP GA IRVKK
Sbjct: 775 KLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKK 834

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLRIC DCH +F+FISKIVSREII+RD+NRFHHF +G+CSCG YW
Sbjct: 835 NLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 185/640 (28%), Positives = 329/640 (51%), Gaps = 23/640 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L    + + LFLG  +H  ++ +G        N L+  Y+KC     +RR+FD  P+  
Sbjct: 10  LLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDETPDPC 67

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+SL + Y +     EA+  F+ M   G+R NEF+L  ++     +G   LG ++H 
Sbjct: 68  HVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHA 124

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHEHND 179
            ++  G   D+F ANALV MY   G +++A  VF +     + VSWN +++  V ++   
Sbjct: 125 VAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCS 184

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A++LF +M  S + PN F ++  + AC G    E GR++H  +++     D      LV
Sbjct: 185 DAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALV 244

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+K G +  A ++F  +P+ ++++WN  ISG + +G D  A  L   M   G+  +  
Sbjct: 245 DMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVF 304

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           TLS++LK  + A   A  + +Q+H   +K   +SDDYI  +L+D Y K G ++DA K+F+
Sbjct: 305 TLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFE 364

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                DL+   ++I+  +  G   E+L L+  M+    + +    +++L + A+L A   
Sbjct: 365 WIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISD 424

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
             QVH    K GF+SD+   N L++ Y KC  +  A++ F E     I+++++MI  L+Q
Sbjct: 425 TTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQ 484

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQ 536
              G++A+++F +ML  G+ P+   L S+L AC       + K  H   +++KF    M 
Sbjct: 485 CDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKF----MT 540

Query: 537 EHYA--CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
           + +A   ++    + G  ++A      +P +   S W A++G    + +   G+ A ++ 
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVS-WSAMIGGLAQHGH---GKRALDVF 596

Query: 595 FAIEPEK-SSTHVLLSNIYAS---AGMWDNVAKVRRFMKD 630
             +  E+ +  H+ L+++  +   AG+ D        MK+
Sbjct: 597 RRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKE 636



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/482 (34%), Positives = 254/482 (52%), Gaps = 4/482 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +DL  G +VH +VV TG+D D F AN+LV MY+K G+   +  +F  +P+  
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTD 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINA--CAGSGDSLLGRKI 118
           VVSWN+  S  V     + A+    +M  SG+ PN F+LSS++ A   AG+G   LGR+I
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQI 327

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+ IK   DSD +   ALVDMYAK G L+DA  VF+ I   D++ WNA+I+GC     +
Sbjct: 328 HGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCH 387

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             +L LF +M+    + N  T  + LK+ A +E      Q+H    K+   SD  V  GL
Sbjct: 388 GESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGL 447

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y KC  +  A  +F      N+IA+  +I+   Q     +A  LF  M R+G+  D 
Sbjct: 448 IDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDP 507

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             LS++L + AS  A    KQVHA  +K  F +D +  N+L+  Y KCG +EDA   F  
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSG 567

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +V+ ++MI   AQ G G+ AL ++  M D  I P+    +S+L AC +    ++ 
Sbjct: 568 LPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEA 627

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           K     + + FG        + ++++  + G +DDA    + +P +     W A++    
Sbjct: 628 KGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASR 687

Query: 477 QH 478
            H
Sbjct: 688 VH 689



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           +P+S   S LL   A   +   G  +H H++K G +   F  N L++ Y+KC     A R
Sbjct: 3   SPESI--SPLLTRYAATQSLFLGAHIHAHLLKSGLLH-AFR-NHLLSFYSKCRLPGSARR 58

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F E PD   VSWS+++   + +   +EAL  F  M   GV  N   L  VL     AGL
Sbjct: 59  VFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL 118

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             +      ++    G+         ++ + G  G   EA  + D      NA  W  ++
Sbjct: 119 GVQV----HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174

Query: 576 GA 577
            A
Sbjct: 175 SA 176


>gi|255536747|ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549339|gb|EEF50827.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 678

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/557 (61%), Positives = 413/557 (74%), Gaps = 32/557 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  CT+ K    G ++H  V+  G   D  + N L+ +Y+KC  F  +R++ D   E  
Sbjct: 112 LLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKMVDESTEPD 171

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM--------------------------------V 88
           +VSW++L S Y    F +EA+  F EM                                +
Sbjct: 172 LVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTDMWLGRQDMI 231

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           LSGIRPNEFSLS MINAC G  DS  GRKIHGY IKL YD D+FSANALVDMYAKVG LE
Sbjct: 232 LSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGTLE 291

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A+ VF++I  PDIVSWNA+IAGC L E++ WAL+LF +M  S + PNMFT +SALKACA
Sbjct: 292 EAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFTISSALKACA 351

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           GM LKELGRQLH SL+KM+I+SD  + VGL+DMY+KC  M +AR++F+LMPE++LI WN 
Sbjct: 352 GMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERDLIVWNA 411

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
            I+GH QNG D+EA SLFP M++EGVGF+Q TLSTVLKSVAS Q   +C Q+HALS+K+ 
Sbjct: 412 AITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSG 471

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F+ D+Y+ NSLID YGKCG ++DA +IF+ES  VDLVA TSMITAY+Q G GEEALKLYL
Sbjct: 472 FQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYL 531

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           EMQDR+I PDSFVCSSLLNACANLSAYEQGKQVHVH++KFGF+SD FAGNSLVNMYAKCG
Sbjct: 532 EMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFAGNSLVNMYAKCG 591

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           SIDDADRAFSEIP+RGIVSWSAMIGG AQHG GKEALQ+F +MLEDG+ PNH+ +  V  
Sbjct: 592 SIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLFNRMLEDGIPPNHMYVYDVPS 651

Query: 509 ACNHAGLVAEAKHHFES 525
           ACN A L+A  +   ES
Sbjct: 652 ACNPAILIAHLEKTQES 668



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 249/519 (47%), Gaps = 40/519 (7%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P   S S+++  C  S  S  G++IH   IKLG   D    N L+++Y+K    + A  +
Sbjct: 104 PISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKM 163

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF---------------------------- 185
             +   PD+VSW+A+I+G   +     A+  F                            
Sbjct: 164 VDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTDM 223

Query: 186 ----QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
               Q M  S I PN F+ +  + AC G+E    GR++H  LIK+    D      LVDM
Sbjct: 224 WLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDM 283

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAK G+++EA  +F  + + ++++WN +I+G         A  LF  M R G+  +  T+
Sbjct: 284 YAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFTI 343

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           S+ LK+ A      + +Q+H+  +K    SD ++   LID Y KC  + DA  +F     
Sbjct: 344 SSALKACAGMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPE 403

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DL+   + IT ++Q G   EA+ L+  M    +  +    S++L + A+L       Q+
Sbjct: 404 RDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQI 463

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +K GF  D +  NSL++ Y KCG I DA R F E P   +V++++MI   +Q G+G
Sbjct: 464 HALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQG 523

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA 540
           +EAL+++ +M +  + P+     S+L AC +     + K  H   +  KFG   + + +A
Sbjct: 524 EEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVL--KFGF--ISDIFA 579

Query: 541 --CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              ++++  + G   +A      +P +   S W A++G 
Sbjct: 580 GNSLVNMYAKCGSIDDADRAFSEIPERGIVS-WSAMIGG 617



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 35/404 (8%)

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P   +Y++ L  C   +    G+++H  +IK+ +  DP +   L+++Y+KC     AR 
Sbjct: 103 TPISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARK 162

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ- 312
           +     E +L++W+ +ISG+ QNG   EA S F  M+  GV  ++ T  ++LK+  S   
Sbjct: 163 MVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTD 222

Query: 313 ----------------------AIGVC---------KQVHALSVKTAFESDDYIVNSLID 341
                                  I  C         +++H   +K A++ D +  N+L+D
Sbjct: 223 MWLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVD 282

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            Y K G +E+A+++F+E +  D+V+  ++I   A       AL+L+ +M    + P+ F 
Sbjct: 283 MYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFT 342

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            SS L ACA +   E G+Q+H  ++K    SD+F    L++MY+KC  + DA   F+ +P
Sbjct: 343 ISSALKACAGMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMP 402

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL-VAEAK 520
           +R ++ W+A I G +Q+G   EA+ +F  M ++GV  N ITL +VL +   A L V    
Sbjct: 403 ERDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSV--ASLQVDHIC 460

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
               ++  K G Q        +ID  G+ G+ ++A  +    PF
Sbjct: 461 SQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPF 504


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/773 (42%), Positives = 497/773 (64%), Gaps = 4/773 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L +C S   L  G ++H   +      D  VAN ++ MYAKCG+  ++R +FD +  +S
Sbjct: 250  LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS 309

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VVSW  +   Y  C   E A   F++M   G+ PN  +  +++NA +G      G+ +H 
Sbjct: 310  VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHS 369

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + +  G++SD+    ALV MYAK G+ +D   VF+ + + D+++WN +I G  L E  +W
Sbjct: 370  HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG--LAEGGNW 427

Query: 181  --ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              A +++ QM+   + PN  TY   L AC        GR++H  ++K     D  V   L
Sbjct: 428  EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNAL 487

Query: 239  VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
            + MYA+CGS+ +AR++F+ M  K++I+W  +I G  ++G   EA ++F  M + G+  ++
Sbjct: 488  ISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNR 547

Query: 299  TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             T +++L + +S  A+   +++H   ++    +D ++ N+L++ Y  CG V+DA ++F  
Sbjct: 548  VTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDR 607

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
             +  D+VA  +MI  YA   LG+EALKL+  +Q+  + PD     ++LNACAN  + E  
Sbjct: 608  MTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWA 667

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            K++H  ++K G++SDT  GN+LV+ YAKCGS  DA   F ++  R ++SW+A+IGG AQH
Sbjct: 668  KEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQH 727

Query: 479  GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
            GRG++ LQ+F +M  +G+ P+ +T VS+L AC+HAGL+ E + +F SM + FGI P  EH
Sbjct: 728  GRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEH 787

Query: 539  YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            Y CM+D+LGRAG+  E   L+ TMPFQAN  +WGALLGA RI+ NV V + AAE    ++
Sbjct: 788  YGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLD 847

Query: 599  PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
            P+ ++ +V LS++YA+AGMWD+ AK+R+ M+   + KEPG SWIEV DK++ F   DRSH
Sbjct: 848  PDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSH 907

Query: 659  ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
              S++IYA+LD+++  +   GYVP   + +HDV+E EKE  + HHSE+LA+A+GLI+T P
Sbjct: 908  PESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLP 967

Query: 719  GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G  IR+ KNLR+C DCHT+ +FI+KIV REI+ RDVNRFHHF++G CSCG YW
Sbjct: 968  GTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 189/579 (32%), Positives = 329/579 (56%), Gaps = 4/579 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI--PE 58
           +LK C   KDL  G +VH  ++      D++  N+L+ MY +CG+  ++R++++ +   E
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+V SWN++   YV   ++EEA+   +EM   G+     +   ++++C        GR+I
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K     D+  AN +++MYAK G++ +A  VF  +E   +VSW  +I G     H+
Sbjct: 267 HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHS 326

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A ++FQ+M+   + PN  TY + L A +G    + G+ +H  ++    +SD  VG  L
Sbjct: 327 EIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTAL 386

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V MYAKCGS  + R +F  +  ++LIAWN +I G  + G   EA+ ++  M REG+  ++
Sbjct: 387 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNK 446

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   +L +  +  A+   +++H+  VK  F  D  + N+LI  Y +CG ++DA  +F +
Sbjct: 447 ITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNK 506

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+++ T+MI   A+ GLG EAL ++ +MQ   + P+    +S+LNAC++ +A + G
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H  +I+ G  +D    N+LVNMY+ CGS+ DA + F  +  R IV+++AMIGG A H
Sbjct: 567 RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAH 626

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
             GKEAL++F ++ E+G+ P+ +T +++L AC ++G +  AK    S+  K G       
Sbjct: 627 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAK-EIHSLVLKDGYLSDTSL 685

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              ++    + G F +A+ + D M  + N   W A++G 
Sbjct: 686 GNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGG 723



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 169/534 (31%), Positives = 286/534 (53%), Gaps = 15/534 (2%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G R N      M+  C    D + GR++H + I+     D ++ NAL++MY + G++E+A
Sbjct: 136 GARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEA 195

Query: 151 VAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
             V+  + H +  + SWNA++ G V + + + ALKL ++M+   +     T    L +C 
Sbjct: 196 RQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCK 255

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
                E GR++H   +K  +  D  V   +++MYAKCGS+ EAR +F  M  K++++W I
Sbjct: 256 SPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTI 315

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G+   G    A  +F  M +EGV  ++ T   VL + +   A+   K VH+  +   
Sbjct: 316 IIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAG 375

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            ESD  +  +L+  Y KCG  +D  ++F++    DL+A  +MI   A+ G  EEA ++Y 
Sbjct: 376 HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYH 435

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +MQ   + P+      LLNAC N +A   G+++H  ++K GFM D    N+L++MYA+CG
Sbjct: 436 QMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCG 495

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           SI DA   F+++  + I+SW+AMIGGLA+ G G EAL +F  M + G+ PN +T  S+L 
Sbjct: 496 SIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILN 555

Query: 509 ACNH-AGLVAEAKHHFESMEKKFGIQPMQEHYA-CMIDILGRAGKFQEAMELVDTMPFQA 566
           AC+  A L    + H + +E          H A  ++++    G  ++A ++ D M  Q 
Sbjct: 556 ACSSPAALDWGRRIHQQVIEAGLATDA---HVANTLVNMYSMCGSVKDARQVFDRMT-QR 611

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE----KSSTHVLLSNIYASAG 616
           +   + A++G    Y    +G+ A ++   ++ E       T++ + N  A++G
Sbjct: 612 DIVAYNAMIGG---YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 215/404 (53%), Gaps = 10/404 (2%)

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL--GRQLHCSLIKMEIKSDPIVGV 236
           D A+ + Q ++      N   Y   LK C  +E+K+L  GR++H  +I+     D     
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRC--IEVKDLVAGREVHEHIIQHCTVLDQYTVN 180

Query: 237 GLVDMYAKCGSMDEARMIFHLM--PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
            L++MY +CGS++EAR +++ +   E+ + +WN ++ G++Q G   EA  L   M + G+
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
              + T   +L S  S  A+   +++H  ++K     D  + N +++ Y KCG + +A +
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F +     +V+ T +I  YA  G  E A +++ +MQ   + P+     ++LNA +  +A
Sbjct: 301 VFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            + GK VH HI+  G  SD   G +LV MYAKCGS  D  + F ++ +R +++W+ MIGG
Sbjct: 361 LKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 420

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQ 533
           LA+ G  +EA +++ QM  +G++PN IT V +L AC N   L    + H   ++  F   
Sbjct: 421 LAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFD 480

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              ++   +I +  R G  ++A  L + M  + +   W A++G 
Sbjct: 481 ISVQN--ALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 129/234 (55%), Gaps = 2/234 (0%)

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           G   A  +  ++ ++G   +      +LK     + +   ++VH   ++     D Y VN
Sbjct: 121 GKDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVN 180

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLV--ACTSMITAYAQFGLGEEALKLYLEMQDREI 395
           +LI+ Y +CG +E+A +++ + +  +    +  +M+  Y Q+G  EEALKL  EMQ   +
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
                    LL++C + SA E G+++HV  +K   + D    N ++NMYAKCGSI +A  
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
            F ++  + +VSW+ +IGG A  G  + A ++F +M ++GV+PN IT ++VL A
Sbjct: 301 VFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/770 (42%), Positives = 487/770 (63%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C S   L  G ++H   +  G   D  VAN ++ MYAKCG+  ++R +FD + ++SV
Sbjct: 133 LSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSV 192

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW      Y  C   E A   F++M   G+ PN  +  S++NA +       G+ +H  
Sbjct: 193 VSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSR 252

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +  G++SD     ALV MYAK G+ +D   VF+ + + D+++WN +I G     + + A
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEA 312

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            +++ QM+   + PN  TY   L AC        G+++H  + K    SD  V   L+ M
Sbjct: 313 SEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM 372

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y++CGS+ +AR++F  M  K++I+W  +I G  ++G   EA +++  M + GV  ++ T 
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L + +S  A+   +++H   V+    +D ++ N+L++ Y  CG V+DA ++F     
Sbjct: 433 TSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQ 492

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D+VA  +MI  YA   LG+EALKL+  +Q+  + PD     ++LNACAN  + E  +++
Sbjct: 493 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREI 552

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  + K GF SDT  GN+LV+ YAKCGS  DA   F ++  R ++SW+A+IGG AQHGRG
Sbjct: 553 HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRG 612

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           ++ALQ+F +M  +GV P+ +T VS+L AC+HAGL+ E + +F SM + F I P  EHY C
Sbjct: 613 QDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC 672

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           M+D+LGRAG+  EA  L+ TMPFQAN  +WGALLGA RI+ NV V + AAE    ++ + 
Sbjct: 673 MVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDN 732

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           +  +V LS++YA+AGMWD+ AK+R+ M+   + KEPG SWI+V DK++ F   DRSH +S
Sbjct: 733 AVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQS 792

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           ++IYA+LD ++  +   GYVP   + +HDV+E EKE  + HHSE+LA+A+GLI+TPPG  
Sbjct: 793 EKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTR 852

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I + KNLR+C DCHT+ +FISKIV REII RDVNRFHHF++G CSCG YW
Sbjct: 853 IHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 191/580 (32%), Positives = 332/580 (57%), Gaps = 4/580 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           +LK C   KDL  G QVH  ++      D++  N+L+ MY +CG+  ++R+++  +   E
Sbjct: 29  MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+V SWN++   Y+   ++E+A+   ++M   G+ P+  ++ S +++C   G    GR+I
Sbjct: 89  RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  +++ G   D+  AN +++MYAK G++E+A  VF  +E   +VSW   I G      +
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A ++FQ+M+   + PN  TY S L A +     + G+ +H  ++    +SD  VG  L
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTAL 268

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V MYAKCGS  + R +F  +  ++LIAWN +I G  + G   EA+ ++  M REGV  ++
Sbjct: 269 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNK 328

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   +L +  +  A+   K++H+   K  F SD  + N+LI  Y +CG ++DA  +F +
Sbjct: 329 ITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDK 388

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+++ T+MI   A+ G G EAL +Y EMQ   + P+    +S+LNAC++ +A E G
Sbjct: 389 MVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWG 448

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H  +++ G  +D   GN+LVNMY+ CGS+ DA + F  +  R IV+++AMIGG A H
Sbjct: 449 RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAH 508

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
             GKEAL++F ++ E+G+ P+ +T +++L AC ++G +  A+    ++ +K G       
Sbjct: 509 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR-EIHTLVRKGGFFSDTSV 567

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
              ++    + G F +A  + + M  + N   W A++G +
Sbjct: 568 GNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGS 606



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 266/487 (54%), Gaps = 14/487 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A +S   L  G  VH  ++  G +SD  V  +LV MYAKCG++ D R++F+ +  R 
Sbjct: 233 VLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRD 292

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +++WN++        + EEA   + +M   G+ PN+ +   ++NAC  S     G++IH 
Sbjct: 293 LIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHS 352

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G+ SD+   NAL+ MY++ G+++DA  VF  +   D++SW A+I G         
Sbjct: 353 RVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAE 412

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL ++Q+M+ + + PN  TYTS L AC+     E GR++H  +++  + +D  VG  LV+
Sbjct: 413 ALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVN 472

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+ CGS+ +AR +F  M +++++A+N +I G+  +    EA  LF  +  EG+  D+ T
Sbjct: 473 MYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVT 532

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L + A+  ++   +++H L  K  F SD  + N+L+  Y KCG   DA  +F++ +
Sbjct: 533 YINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT 592

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++++  ++I   AQ G G++AL+L+  M+   + PD     SLL+AC++    E+G++
Sbjct: 593 KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRR 652

Query: 421 VHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMI 472
                  F  MS  FA          +V++  + G +D+A+     +P +     W A++
Sbjct: 653 Y------FCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALL 706

Query: 473 GGLAQHG 479
           G    HG
Sbjct: 707 GACRIHG 713



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 296/544 (54%), Gaps = 13/544 (2%)

Query: 80  AVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
           AV   + +   G + N      M+  C    D + GR++H + I+     D ++ NAL++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 140 MYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           MY + G++E+A  V+K + + +  + SWNA++ G + + + + ALKL +QM+   + P+ 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
            T  S L +C      E GR++H   ++  +  D  V   +++MYAKCGS++EAR +F  
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M +K++++W I I G+   G    A  +F  M +EGV  ++ T  +VL + +S  A+   
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K VH+  +    ESD  +  +L+  Y KCG  +D  ++F++    DL+A  +MI   A+ 
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  EEA ++Y +MQ   + P+      LLNAC N +A   GK++H  + K GF SD    
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           N+L++MY++CGSI DA   F ++  + ++SW+AMIGGLA+ G G EAL ++ +M + GV 
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426

Query: 498 PNHITLVSVLCACNH-AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           PN +T  S+L AC+  A L    + H + +E   G+         ++++    G  ++A 
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEA--GLATDAHVGNTLVNMYSMCGSVKDAR 484

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE----KSSTHVLLSNIY 612
           ++ D M  Q +   + A++G    Y    +G+ A ++   ++ E       T++ + N  
Sbjct: 485 QVFDRM-IQRDIVAYNAMIGG---YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 540

Query: 613 ASAG 616
           A++G
Sbjct: 541 ANSG 544



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 219/408 (53%), Gaps = 18/408 (4%)

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL--GRQLHCSLIKMEIKSDPIVGV 236
           D A+ + Q ++      N   Y   LK C  +E+K+L  GRQ+H  +I+     D     
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRC--IEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62

Query: 237 GLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
            L++MY +CGS++EAR ++  +   E+ + +WN ++ G++Q G   +A  L   M + G+
Sbjct: 63  ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+TT+ + L S  S  A+   +++H  +++     D  + N +++ Y KCG +E+A +
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEARE 182

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F +     +V+ T  I  YA  G  E A +++ +M+   + P+     S+LNA ++ +A
Sbjct: 183 VFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAA 242

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            + GK VH  I+  G  SDT  G +LV MYAKCGS  D  + F ++ +R +++W+ MIGG
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 302

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKF--- 530
           LA+ G  +EA +++ QM  +GV+PN IT V +L AC N A L    + H    +  F   
Sbjct: 303 LAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD 362

Query: 531 -GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            G+Q        +I +  R G  ++A  + D M  + +   W A++G 
Sbjct: 363 IGVQN------ALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGG 403


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/771 (41%), Positives = 485/771 (62%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L AC++ K L  G  +H  +   G  SD  + N+L+ MYA+CG+   +R LF  +P+R 
Sbjct: 336  ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++SWN++ + Y   +   EA+  +K+M   G++P   +   +++ACA S     G+ IH 
Sbjct: 396  LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++ G  S+   ANAL++MY + G+L +A  VF+  +  D++SWN++IAG   H   + 
Sbjct: 456  DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A KLFQ+M++ E+ P+  T+ S L  C   E  ELG+Q+H  + +  ++ D  +G  L++
Sbjct: 516  AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY +CGS+ +AR +FH +  +++++W  +I G    G DM+A  LF  M  EG    ++T
Sbjct: 576  MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKST 635

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             S++LK   S   +   K+V A  + + +E D  + N+LI AY K G + DA ++F +  
Sbjct: 636  FSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            + D+V+   +I  YAQ GLG+ A++   +MQ++++ P+ F   SLLNAC++ SA E+GK+
Sbjct: 696  SRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKR 755

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            VH  I+K     D   G +L++MYAKCGS  +A   F  I ++ +V+W+AMI   AQHG 
Sbjct: 756  VHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGL 815

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
              +AL  F  M ++G+ P+  T  S+L ACNHAGLV E    F SME ++G+ P  EHY 
Sbjct: 816  ASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYG 875

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++ +LGRA +FQEA  L++ MPF  +A+VW  LLGA RI+ N+ + +HAA     +   
Sbjct: 876  CLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNAR 935

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
              + ++LLSN+YA+AG WD+VAK+RR M+   ++KEPG SWIEV + ++ F   DRSH  
Sbjct: 936  NPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPE 995

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + EIYA+L  +S  + +AGY P  +  LHD+ ++ +E  L  HSE+LA+A+GLI TPPG 
Sbjct: 996  TAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGT 1055

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLRIC DCHT+ +FISK+V REII RD NRFH F+NG CSC  YW
Sbjct: 1056 PIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 308/578 (53%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CT K+ L    ++H  +V      D F++N L+ MY KC + +D+ ++F  +P R 
Sbjct: 33  LLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRD 92

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SWNSL SCY    F ++A   F+EM  +G  PN+ +  S++ AC    +   G+KIH 
Sbjct: 93  VISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHS 152

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK GY  D    N+L+ MY K G+L  A  VF  I   D+VS+N ++       +   
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L LF QM S  I+P+  TY + L A     + + G+++H   ++  + SD  VG  LV 
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M  +CG +D A+  F    +++++ +N +I+   Q+G ++EA   +  M  +GV  ++TT
Sbjct: 273 MCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTT 332

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + ++ +A+   K +H+   +    SD  I N+LI  Y +CG +  A ++F    
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP 392

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  ++I  YA+     EA++LY +MQ   + P       LL+ACAN SAY  GK 
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM 452

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I++ G  S+    N+L+NMY +CGS+ +A   F     R ++SW++MI G AQHG 
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
            + A ++F +M  + + P++IT  SVL  C +   +   K  H    E   G+Q      
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES--GLQLDVNLG 570

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             +I++  R G  Q+A  +  ++  + +   W A++G 
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGG 607



 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 186/578 (32%), Positives = 315/578 (54%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A T+   L  G ++H + V  G +SD  V  +LV M  +CG+   +++ F    +R 
Sbjct: 235 LLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRD 294

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV +N+L +         EA   +  M   G+  N  +  S++NAC+ S     G+ IH 
Sbjct: 295 VVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHS 354

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  + G+ SD+   NAL+ MYA+ G+L  A  +F  +   D++SWNA+IAG    E    
Sbjct: 355 HISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGE 414

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L++QM+S  + P   T+   L ACA       G+ +H  +++  IKS+  +   L++
Sbjct: 415 AMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMN 474

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY +CGS+ EA+ +F     +++I+WN +I+GH Q+G    A  LF  M  E +  D  T
Sbjct: 475 MYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNIT 534

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++VL    + +A+ + KQ+H    ++  + D  + N+LI+ Y +CG ++DA  +F    
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ 594

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+++ T+MI   A  G   +A++L+ +MQ+    P     SS+L  C + +  ++GK+
Sbjct: 595 HRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKK 654

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           V  +I+  G+  DT  GN+L++ Y+K GS+ DA   F ++P R IVSW+ +I G AQ+G 
Sbjct: 655 VIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGL 714

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
           G+ A++   QM E  V+PN  + VS+L AC+    + E K  H E +++K  +Q      
Sbjct: 715 GQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRK--LQGDVRVG 772

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           A +I +  + G   EA E+ D +  + N   W A++ A
Sbjct: 773 AALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINA 809



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 204/397 (51%), Gaps = 12/397 (3%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           TY + L+ C    L    +++H  +++  +  D  +   L++MY KC S+ +A  +F  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P +++I+WN +IS + Q G   +A  LF  M   G   ++ T  ++L +  S   +   K
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H+  +K  ++ D  + NSL+  YGKCG +  A ++F   S  D+V+  +M+  YAQ  
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             +E L L+ +M    I+PD     +LL+A    S  ++GK++H   ++ G  SD   G 
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LV M  +CG +D A +AF    DR +V ++A+I  LAQHG   EA + + +M  DGV  
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           N  T +S+L AC+ +  + EA     S   + G     +    +I +  R G   +A EL
Sbjct: 329 NRTTYLSILNACSTSKAL-EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 559 VDTMPFQANASVWGALLG----------AARIYKNVE 585
             TMP + +   W A++           A R+YK ++
Sbjct: 388 FYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQ 423



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 128/225 (56%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++ T   +L++    + +   K++HA  V+     D ++ N LI+ Y KC  V DA ++F
Sbjct: 26  ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           KE    D+++  S+I+ YAQ G  ++A +L+ EMQ+    P+     S+L AC + +  E
Sbjct: 86  KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GK++H  IIK G+  D    NSL++MY KCG +  A + F+ I  R +VS++ M+G  A
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           Q    KE L +FGQM  +G+ P+ +T +++L A     ++ E K 
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q R    +     +LL  C       + K++H  +++     D F  N L+NMY KC S+
Sbjct: 19  QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            DA + F E+P R ++SW+++I   AQ G  K+A Q+F +M   G +PN IT +S+L AC
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 511 -NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
            + A L    K H + ++  +   P  ++   ++ + G+ G    A ++   +  +   S
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPRDVVS 196

Query: 570 VWGALLG--AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
            +  +LG  A + Y    +G         I P+K  T++ L + + +  M D   ++ + 
Sbjct: 197 -YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK-VTYINLLDAFTTPSMLDEGKRIHKL 254

Query: 628 MKDNKLKKE 636
             +  L  +
Sbjct: 255 TVEEGLNSD 263


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/773 (41%), Positives = 478/773 (61%), Gaps = 4/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C   KDL +G QVH  ++  G   + ++ N+L+ +Y  CG+  ++RRLFD    +S
Sbjct: 50  LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN + S Y H    +EA   F  M   G+ P++F+  S+++AC+       GR++H 
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G  ++    NAL+ MYAK G++ DA  VF  +   D VSW  +        +   
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +LK +  M    + P+  TY + L AC  +   E G+Q+H  +++ E  SD  V   L  
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ +AR +F  +P +++IAWN +I G + +G   EA  +F  M +E V  D+ T
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVT 349

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L + A    +   K++HA +VK    SD    N+LI+ Y K G ++DA ++F    
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQG 418
             D+V+ T+++  YA  G   E+   + +M  Q  E N  +++C  +L AC+N  A + G
Sbjct: 410 KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMC--VLKACSNPVALKWG 467

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H  ++K G  +D    N+L++MY KCGS++DA R    +  R +V+W+ +IGGLAQ+
Sbjct: 468 KEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQN 527

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG EALQ F  M  + + PN  T V+V+ AC    LV E +  F SM K +GI P ++H
Sbjct: 528 GRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKH 587

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YACM+DIL RAG   EA +++ TMPF+ +A++WGALL A R + NVE+G+ AAE    +E
Sbjct: 588 YACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLE 647

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+ + T+V LS IYA+AGMW +VAK+R+ MK+  +KKEPG SWIEV  +V++F  GD+SH
Sbjct: 648 PQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSH 707

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            R++EIY++L+ ++  +   GYVP     +HD+++  KE+ + HHSEKLA+A+GLI+TPP
Sbjct: 708 PRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPP 767

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              IRV KNLR+C DCHT+ +FISKI  REII RD +RFHHF+NG CSCG YW
Sbjct: 768 ETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 254/487 (52%), Gaps = 4/487 (0%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G + + +    ++ +C  + D  +G+++H + ++ G   +++  N L+ +Y   G++ +A
Sbjct: 39  GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEA 98

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +F    +  +VSWN +I+G         A  LF  M+   + P+ FT+ S L AC+  
Sbjct: 99  RRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                GR++H  +++  + ++  VG  L+ MYAKCGS+ +AR +F  M  ++ ++W  + 
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
             + ++G   E+   +  M +EGV   + T   VL +  S  A+   KQ+HA  V++   
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           SD  +  +L   Y KCG V+DA ++F+     D++A  +MI      G  EEA  ++  M
Sbjct: 279 SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
               + PD     ++L+ACA       GK++H   +K G +SD   GN+L+NMY+K GS+
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSM 398

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            DA + F  +P R +VSW+A++GG A  G+  E+   F +ML+ GV  N IT + VL AC
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458

Query: 511 NHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           ++   +   K  H E +  K GI         ++ +  + G  ++A+ + + M  + +  
Sbjct: 459 SNPVALKWGKEIHAEVV--KAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVV 515

Query: 570 VWGALLG 576
            W  L+G
Sbjct: 516 TWNTLIG 522



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 166/301 (55%), Gaps = 16/301 (5%)

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
           A +  +++++G   D      +L+S    + + V KQVH   ++   + + YI+N+L+  
Sbjct: 29  ADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL 88

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y  CG V +A ++F + S   +V+   MI+ YA  GLG+EA  L+  MQ   + PD F  
Sbjct: 89  YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            S+L+AC++ +A   G++VHV +++ G  ++   GN+L++MYAKCGS+ DA R F  +  
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
           R  VSW+ + G  A+ G  +E+L+ +  ML++GV P+ IT ++VL AC     + + K  
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268

Query: 522 HFESMEKKFGIQPMQEHYA------CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           H + +E         EH++       +  +  + G  ++A E+ + +P + +   W  ++
Sbjct: 269 HAQIVE--------SEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR-DVIAWNTMI 319

Query: 576 G 576
           G
Sbjct: 320 G 320


>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
 gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/574 (56%), Positives = 420/574 (73%), Gaps = 3/574 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP-ERSVVSWNSLF 68
           D+  G QVH + V T    D FV N+LV MY   G   +++R+FD    ER+ VSWN + 
Sbjct: 115 DVRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMI 174

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S YV  D   +AV  F+EMV SG RPNEF  S ++NAC GS D   GR++HG  ++ GYD
Sbjct: 175 SAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYD 234

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D+F+ANALVDMY+K+G++E A  VF+ I   D+VSWNA+IAGCV H H+  AL+L  QM
Sbjct: 235 KDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQM 294

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           K   + PN+FT +S LKACAG     LGRQ+H  +IK +  SD  V VGLVDMYAK G +
Sbjct: 295 KPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFL 354

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD--QTTLSTVLK 306
           D+AR +F  MP ++LI WN +ISG   +G   E  SLF  M +EG+  D  +TTL+ VLK
Sbjct: 355 DDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLK 414

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S AS +AI   KQVHAL+ K    SD ++VN LID+Y KCG ++ A+K+F+ES + D+++
Sbjct: 415 STASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIIS 474

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            TSM+TA +Q   GE+A+KL+++M  + + PDSFV SSLLNACA+LSAYEQGKQVH H+I
Sbjct: 475 STSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLI 534

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K  F SD FAGN+LV  YAKCGSI+DAD AFS +P++G+VSWSAMIGGLAQHG GK AL+
Sbjct: 535 KRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALE 594

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F +ML++GV PN+ITL SVL ACNHAGLV +AK +FESM++ FGI   +EHYACMIDIL
Sbjct: 595 LFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDIL 654

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
           GRAGK ++AMELV+ MPFQANA+VWGALLGA+R+
Sbjct: 655 GRAGKLKDAMELVNNMPFQANAAVWGALLGASRL 688



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 170/478 (35%), Positives = 261/478 (54%), Gaps = 6/478 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ ACT  +D   G QVHG+VV TG+D D F AN+LV MY+K G+   +  +F+ IP   
Sbjct: 208 VVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAAD 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L +  V       A+    +M   G+ PN F+LSS++ ACAG+G   LGR+IHG
Sbjct: 268 VVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHG 327

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   DSD F A  LVDMYAK G L+DA  VF  +   D++ WNA+I+GC     +  
Sbjct: 328 FMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 387

Query: 181 ALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            L LF +M+    +++ N  T  + LK+ A +E     +Q+H    K+ + SD  V  GL
Sbjct: 388 VLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGL 447

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y KCG +D A  +F      ++I+   +++   Q     +A  LF  M R+G+  D 
Sbjct: 448 IDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDS 507

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             LS++L + AS  A    KQVHA  +K  F SD +  N+L+  Y KCG +EDA   F  
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSG 567

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +V+ ++MI   AQ G G+ AL+L+  M D  + P++   +S+L+AC +    +  
Sbjct: 568 LPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDA 627

Query: 419 KQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIG 473
           K+ +   +K  F  D    +   ++++  + G + DA    + +P +   + W A++G
Sbjct: 628 KK-YFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLG 684



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 177/632 (28%), Positives = 321/632 (50%), Gaps = 19/632 (3%)

Query: 7   SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS 66
           + + L  G  +H  ++ +G  +    +N L+  Y++C     +R +FD IP+   VSW+S
Sbjct: 16  ASRSLLAGAHLHSHLLKSGLLAS--YSNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSS 73

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           L + Y +     +A+  F+ M   G+  NE++L  ++  CA   D   G ++H  ++   
Sbjct: 74  LVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CA--PDVRFGAQVHALAVATR 130

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLF 185
              D+F  NALV MY   G +++A  +F +     + VSWN +I+  V ++    A+ +F
Sbjct: 131 LIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVF 190

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           ++M  S   PN F ++  + AC G    E GRQ+H  +++     D      LVDMY+K 
Sbjct: 191 REMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKL 250

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G ++ A ++F  +P  ++++WN +I+G + +G D  A  L   M   GV  +  TLS+VL
Sbjct: 251 GDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVL 310

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           K+ A   A  + +Q+H   +K   +SD+++   L+D Y K G ++DA K+F      DL+
Sbjct: 311 KACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLI 370

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQVHV 423
              ++I+  +  G   E L L+  M+   ++ D      +++L + A+L A    KQVH 
Sbjct: 371 LWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHA 430

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
              K G +SD+   N L++ Y KCG +D A + F E     I+S ++M+  L+Q   G++
Sbjct: 431 LAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGED 490

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACM 542
           A+++F QML  G+ P+   L S+L AC       + K  H   ++++F       +   +
Sbjct: 491 AIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGN--AL 548

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK- 601
           +    + G  ++A      +P +   S W A++G    + +   G+ A E+   +  E  
Sbjct: 549 VYTYAKCGSIEDADMAFSGLPEKGVVS-WSAMIGGLAQHGH---GKRALELFHRMLDEGV 604

Query: 602 SSTHVLLSNIYAS---AGMWDNVAKVRRFMKD 630
           +  ++ L+++ ++   AG+ D+  K    MK+
Sbjct: 605 APNNITLTSVLSACNHAGLVDDAKKYFESMKE 636


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/771 (40%), Positives = 473/771 (61%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C   KDL +G QVH  ++  G   + ++ N+L+ +YA CG+  ++R+LFD    +S
Sbjct: 34  LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKS 93

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN + S Y H    +EA   F  M    + P++F+  S+++AC+       GR+IH 
Sbjct: 94  VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G  +D    NAL+ MYAK G++ DA  VF  +   D VSW  +        + + 
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +LK +  M    + P+  TY + L AC  +   E G+Q+H  +++ E  SD  V   L  
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG+  +AR +F  +  +++IAWN +I G + +G   EA   F  M  EGV  D+ T
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +TVL + A    +   K++HA + K    SD    N+LI+ Y K G ++DA ++F    
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 393

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ T+++  YA      E+   + +M  + +  +      +L AC+N  A + GK+
Sbjct: 394 KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKE 453

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  ++K G ++D    N+L++MY KCGS++DA R F  +  R +V+W+ +IGGL Q+GR
Sbjct: 454 IHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGR 513

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EALQ +  M  +G+ PN  T V+VL AC    LV E +  F  M K +GI P ++HYA
Sbjct: 514 GLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYA 573

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DIL RAG  +EA +++ T+P + +A++WGALL A RI+ NVE+G+ AAE    +EP+
Sbjct: 574 CMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQ 633

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +V LS IYA+AGMW +VAK+R+FMK+  +KKEPG SWIE+  +V++F   D+SH R
Sbjct: 634 NAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPR 693

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           ++EIYA+L+ +   +   GYVP     +HD+++  KE+ + HHSEKLA+A+GLI+TPPG 
Sbjct: 694 TQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGT 753

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IR+ KNLR+C DCHT+ +FISKI  REII RD +RFHHF+NG CSCG YW
Sbjct: 754 PIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 280/562 (49%), Gaps = 37/562 (6%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G + + +    ++ +C  + D  +G+++H + ++ G   +++  N L+ +YA  G++ +A
Sbjct: 23  GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +F    +  +VSWN +I+G         A  LF  M+   + P+ FT+ S L AC+  
Sbjct: 83  RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
            +   GR++H  +++  + +D  VG  L+ MYAKCGS+ +AR +F  M  ++ ++W  + 
Sbjct: 143 AVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
             + ++G   E+   +  M +E V   + T   VL +  S  A+   KQ+HA  V++ + 
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           SD  +  +L   Y KCG  +DA ++F+  S  D++A  +MI  +   G  EEA   +  M
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
            +  + PD    +++L+ACA      +GK++H    K G +SD   GN+L+NMY+K GS+
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSM 382

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            DA + F  +P R +VSW+ ++G  A   +  E+   F QML+ GV  N IT + VL AC
Sbjct: 383 KDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKAC 442

Query: 511 NH----------------AGLVAEAKHHFESMEKKFGIQPMQE--------------HYA 540
           ++                AGL+A+       M   F    +++               + 
Sbjct: 443 SNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWN 502

Query: 541 CMIDILGRAGKFQEAMELVDTMP---FQANASVWGALLGAARIYKNVEVGQHAAEML--- 594
            +I  LG+ G+  EA++  + M     + NA+ +  +L A R+   VE G+     +   
Sbjct: 503 TLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKD 562

Query: 595 FAIEPEKSSTHVLLSNIYASAG 616
           + I P +   +  + +I A AG
Sbjct: 563 YGIVPTEKH-YACMVDILARAG 583



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 161/294 (54%), Gaps = 4/294 (1%)

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
           A +  +++R+G   D      +L+S    + + V KQVH   ++   + + YI N+L+  
Sbjct: 13  ADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKL 72

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y  CG V +A ++F + S   +V+   MI+ YA  GL +EA  L+  MQ   + PD F  
Sbjct: 73  YAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTF 132

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            S+L+AC++ +    G+++HV +++ G  +DT  GN+L++MYAKCGS+ DA R F  +  
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
           R  VSW+ + G  A+ G G+E+L+ +  ML++ V P+ IT ++VL AC     + + K  
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           H   +E ++           +  +  + G F++A E+ + + ++ +   W  ++
Sbjct: 253 HAHIVESEYHSDVRVS--TALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMI 303


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/771 (39%), Positives = 485/771 (62%), Gaps = 1/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC   +++  G +++ +++  G+D+D FV  +L+ M+ KCG+  D+ ++FD +P R 
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+W S+ +        ++A   F+ M   G++P++ +  S++ AC        G+K+H 
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++G+D++++   A++ MY K G++EDA+ VF  ++  ++VSW A+IAG   H   D 
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A   F +M  S I PN  T+ S L AC+     + G+Q+   +I+    SD  V   L+ 
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A  +F  + ++N++AWN +I+ ++Q+     A + F  + +EG+  + +T
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++L    S  ++ + K VH L +K   ESD ++ N+L+  +  CG +  A  +F +  
Sbjct: 517 FTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV+  ++I  + Q G  + A   +  MQ+  I PD    + LLNACA+  A  +G++
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR 636

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I +  F  D   G  L++MY KCGSI+DA + F ++P + + SW++MI G AQHGR
Sbjct: 637 LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGR 696

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEAL++F QM ++GV P+ IT V  L AC HAGL+ E  HHF+SM K+F I+P  EHY 
Sbjct: 697 GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYG 755

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+ GRAG   EA+E +  M  + ++ VWGALLGA +++ NVE+ + AA+    ++P 
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +   V+LSNIYA+AGMW  VAK+R+ M D  + K+PG SWIEV  KV+TF   D++H +
Sbjct: 816 DNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQ 875

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           ++EI+A+L+ +   + + GYVP     LHDVE++EKEQ L++HSE+LA+ +GL+ TPP  
Sbjct: 876 TEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLT 935

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I + KNLR+C DCHT+ +FISKI  R+II RD NRFHHF++G CSCG +W
Sbjct: 936 PIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 328/601 (54%), Gaps = 7/601 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   K+L  G +++  +  +G   D F+ N+L+ MYAKCGN I ++++FD + E+ 
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKD 175

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SWN L   YV     EEA    ++MV   ++P++ +  SM+NACA + +   GR+++ 
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G+D+D+F   AL++M+ K G++ DA  VF ++   D+V+W ++I G   H     
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LFQ+M+   + P+   + S L+AC   E  E G+++H  + ++   ++  VG  ++ 
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGSM++A  +F L+  +N+++W  +I+G  Q+G   EA   F  M   G+  ++ T
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + +S  A+   +Q+    ++  + SDD +  +L+  Y KCG ++DA ++F++ S
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++VA  +MITAY Q    + AL  +  +    I P+S   +S+LN C +  + E GK 
Sbjct: 476 KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKW 535

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH  I+K G  SD    N+LV+M+  CG +  A   F+++P R +VSW+ +I G  QHG+
Sbjct: 536 VHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGK 595

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
            + A   F  M E G+ P+ IT   +L AC     + E +  H    E  F    +    
Sbjct: 596 NQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG-- 653

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             +I +  + G  ++A ++   +P + N   W +++     Y     G+ A E+ + ++ 
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAG---YAQHGRGKEALELFYQMQQ 709

Query: 600 E 600
           E
Sbjct: 710 E 710



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 276/548 (50%), Gaps = 43/548 (7%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV----SWNSLFSCYVHCDF 76
           VVF     D   AN+++   +K G F ++ ++ + +    +     ++++L    +    
Sbjct: 67  VVFADI-KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L +    +  +  SG++P+ F  +++IN                                
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLIN-------------------------------- 153

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
              MYAK GN   A  +F D+   D+ SWN ++ G V H   + A KL +QM    + P+
Sbjct: 154 ---MYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T+ S L ACA     + GR+L+  ++K    +D  VG  L++M+ KCG + +A  +F 
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +P ++L+ W  +I+G  ++G   +A +LF  M  EGV  D+    ++L++    +A+  
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K+VHA   +  ++++ Y+  +++  Y KCG +EDA+++F      ++V+ T+MI  +AQ
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  +EA   + +M +  I P+     S+L AC++ SA ++G+Q+  HII+ G+ SD   
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             +L++MYAKCGS+ DA R F +I  + +V+W+AMI    QH +   AL  F  +L++G+
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510

Query: 497 LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            PN  T  S+L  C  +  +   K  HF  M  K G++        ++ +    G    A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIM--KAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 556 MELVDTMP 563
             L + MP
Sbjct: 569 KNLFNDMP 576



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 233/426 (54%), Gaps = 6/426 (1%)

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF DI+  D    NAV+         + A+++ +++ SS I     TY++ L+ C   + 
Sbjct: 68  VFADIK--DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              G +++  + K  ++ D  +   L++MYAKCG+   A+ IF  M EK++ +WN+++ G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           ++Q+G   EA  L   M ++ V  D+ T  ++L + A  + +   ++++ L +K  +++D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +LI+ + KCG + DA K+F      DLV  TSMIT  A+ G  ++A  L+  M++
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + PD     SLL AC +  A EQGK+VH  + + G+ ++ + G ++++MY KCGS++D
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A   F  +  R +VSW+AMI G AQHGR  EA   F +M+E G+ PN +T +S+L AC+ 
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425

Query: 513 AGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
              +   +      +E  +G          ++ +  + G  ++A  + + +  Q N   W
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISKQ-NVVAW 482

Query: 572 GALLGA 577
            A++ A
Sbjct: 483 NAMITA 488


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/773 (43%), Positives = 484/773 (62%), Gaps = 6/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C    D  +G QVH   +  GF  D  V  SLV MY K  +  D  R+FD +  ++
Sbjct: 98  VLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN 157

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL + Y      E+A+  F +M L GI+PN F+ ++++   A  G    G ++H 
Sbjct: 158 VVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G DS +F  N++V+MY+K   + DA AVF  +E+ + VSWN++IAG V +  +  
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +LF +M+   +      + + +K CA ++     +QLHC +IK     D  +   L+ 
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            Y+KC  +D+A  +F +M   +N+++W  +ISG++QNG    A +LF  M REGV  +  
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHF 397

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ST+L + A+        Q+HAL VKT +E+   +  +L D+Y K G   +A KIF+  
Sbjct: 398 TYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELI 453

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQG 418
              D+VA ++M++ YAQ G  E A+K++L++    + P+ F  SS+LNACA  +A  EQG
Sbjct: 454 DEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG 513

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ H   IK GF +     ++LV MYAK G+I+ A+  F    DR +VSW++MI G AQH
Sbjct: 514 KQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQH 573

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GK++L++F +M    +  + IT + V+ AC HAGLV E + +F+ M K + I P  EH
Sbjct: 574 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEH 633

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y+CM+D+  RAG  ++AM+L++ MPF A A++W  LL A R++ NV++G+ AAE L +++
Sbjct: 634 YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQ 693

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+ S+ +VLLSNIYA+AG W   AKVR+ M   K+KKE G SWIEVK+K ++F  GD SH
Sbjct: 694 PQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSH 753

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            +S  IY KL+E+S  L  AGY P  +  LHDVEE  KE +L  HSE+LA+AFGLIATPP
Sbjct: 754 PQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPP 813

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  I++ KNLR+C DCHT  + ISKI  R+I+VRD NRFHHF+ GSCSCG YW
Sbjct: 814 GTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 166/511 (32%), Positives = 275/511 (53%), Gaps = 5/511 (0%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           S++LFD  P++ +   N L   +   D  +EA+  F  +  SG   +  SLS ++  C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
             D ++G+++H   IK G+  D+    +LVDMY K  ++ED   VF ++   ++VSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           +AG   +  N+ ALKLF QM+   I PN FT+ + L   A     E G Q+H  +IK  +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            S   VG  +V+MY+K   + +A+ +F  M  +N ++WN +I+G + NG D+EA  LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M  EGV   QT  +TV+K  A+ + +   KQ+H   +K   + D  I  +L+ AY KC  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 349 VEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
           ++DA K+F     V ++V+ T++I+ Y Q G  + A+ L+ +M+   + P+ F  S++L 
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           A A +S      Q+H  ++K  + +    G +L + Y+K G  ++A + F  I ++ IV+
Sbjct: 405 ANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVA 460

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           WSAM+ G AQ G  + A+++F Q+ ++GV PN  T  SVL AC       E    F S  
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 520

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
            K G        + ++ +  + G  + A E+
Sbjct: 521 IKSGFSNALCVSSALVTMYAKRGNIESANEV 551


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/771 (39%), Positives = 485/771 (62%), Gaps = 1/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC   +++  G +++ +++  G+D+D FV  +L+ M+ KCG+  D+ ++FD +P R 
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+W S+ +        ++A   F+ M   G++P++ +  S++ AC        G+K+H 
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++G+D++++   A++ MY K G++EDA+ VF  ++  ++VSW A+IAG   H   D 
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A   F +M  S I PN  T+ S L AC+     + G+Q+   +I+    SD  V   L+ 
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A  +F  + ++N++AWN +I+ ++Q+     A + F  + +EG+  + +T
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++L    S  ++ + K VH L +K   ESD ++ N+L+  +  CG +  A  +F +  
Sbjct: 517 FTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV+  ++I  + Q G  + A   +  MQ+  I PD    + LLNACA+  A  +G++
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR 636

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I +  F  D   G  L++MY KCGSI+DA + F ++P + + SW++MI G AQHGR
Sbjct: 637 LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGR 696

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEAL++F QM ++GV P+ IT V  L AC HAGL+ E  HHF+SM K+F I+P  EHY 
Sbjct: 697 GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYG 755

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+ GRAG   EA+E +  M  + ++ VWGALLGA +++ NVE+ + AA+    ++P 
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +   V+LSNIYA+AGMW  VAK+R+ M D  + K+PG SWIEV  KV+TF   D++H +
Sbjct: 816 DNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQ 875

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           ++EI+A+L+ +   + + GYVP     LHDVE++EKEQ L++HSE+LA+ +GL+ TPP  
Sbjct: 876 TEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLT 935

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I + KNLR+C DCHT+ +FISKI  R+II RD NRFHHF++G CSCG +W
Sbjct: 936 PIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 328/601 (54%), Gaps = 7/601 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   K+L  G +++  +  +G   D F+ N+L+ MYAKCGN I ++++FD + E+ 
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKD 175

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SWN L   YV     EEA    ++MV   ++P++ +  SM+NACA + +   GR+++ 
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G+D+D+F   AL++M+ K G++ DA  VF ++   D+V+W ++I G   H     
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LFQ+M+   + P+   + S L+AC   E  E G+++H  + ++   ++  VG  ++ 
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGSM++A  +F L+  +N+++W  +I+G  Q+G   EA   F  M   G+  ++ T
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + +S  A+   +Q+    ++  + SDD +  +L+  Y KCG ++DA ++F++ S
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++VA  +MITAY Q    + AL  +  +    I P+S   +S+LN C +  + E GK 
Sbjct: 476 KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKW 535

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH  I+K G  SD    N+LV+M+  CG +  A   F+++P R +VSW+ +I G  QHG+
Sbjct: 536 VHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGK 595

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
            + A   F  M E G+ P+ IT   +L AC     + E +  H    E  F    +    
Sbjct: 596 NQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG-- 653

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             +I +  + G  ++A ++   +P + N   W +++     Y     G+ A E+ + ++ 
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITG---YAQHGRGKEALELFYQMQQ 709

Query: 600 E 600
           E
Sbjct: 710 E 710



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 276/548 (50%), Gaps = 43/548 (7%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV----SWNSLFSCYVHCDF 76
           VVF     D   AN+++   +K G F ++ ++ + +    +     ++++L    +    
Sbjct: 67  VVFADI-KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L +    +  +  SG++P+ F  +++IN                                
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLIN-------------------------------- 153

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
              MYAK GN   A  +F D+   D+ SWN ++ G V H   + A KL +QM    + P+
Sbjct: 154 ---MYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T+ S L ACA     + GR+L+  ++K    +D  VG  L++M+ KCG + +A  +F 
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +P ++L+ W  +I+G  ++G   +A +LF  M  EGV  D+    ++L++    +A+  
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K+VHA   +  ++++ Y+  +++  Y KCG +EDA+++F      ++V+ T+MI  +AQ
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  +EA   + +M +  I P+     S+L AC++ SA ++G+Q+  HII+ G+ SD   
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             +L++MYAKCGS+ DA R F +I  + +V+W+AMI    QH +   AL  F  +L++G+
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510

Query: 497 LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            PN  T  S+L  C  +  +   K  HF  M  K G++        ++ +    G    A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIM--KAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 556 MELVDTMP 563
             L + MP
Sbjct: 569 KNLFNDMP 576



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 233/426 (54%), Gaps = 6/426 (1%)

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF DI+  D    NAV+         + A+++ +++ SS I     TY++ L+ C   + 
Sbjct: 68  VFADIK--DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              G +++  + K  ++ D  +   L++MYAKCG+   A+ IF  M EK++ +WN+++ G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           ++Q+G   EA  L   M ++ V  D+ T  ++L + A  + +   ++++ L +K  +++D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +LI+ + KCG + DA K+F      DLV  TSMIT  A+ G  ++A  L+  M++
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + PD     SLL AC +  A EQGK+VH  + + G+ ++ + G ++++MY KCGS++D
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A   F  +  R +VSW+AMI G AQHGR  EA   F +M+E G+ PN +T +S+L AC+ 
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425

Query: 513 AGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
              +   +      +E  +G          ++ +  + G  ++A  + + +  Q N   W
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISKQ-NVVAW 482

Query: 572 GALLGA 577
            A++ A
Sbjct: 483 NAMITA 488


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/771 (40%), Positives = 477/771 (61%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC++ K L  G  +H  +   G  SD  + NSL+ MYA+CG+   +R LF+ +P+R 
Sbjct: 391  VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRD 450

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++SWN++ + Y   +   EA+  +K+M   G++P   +   +++AC  S     G+ IH 
Sbjct: 451  LISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHE 510

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++ G  S+   ANAL++MY + G++ +A  VF+     DI+SWN++IAG   H   + 
Sbjct: 511  DILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEA 570

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A KLF +MK   + P+  T+ S L  C   E  ELGRQ+H  +I+  ++ D  +G  L++
Sbjct: 571  AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALIN 630

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY +CGS+ +A  +FH +  +N+++W  +I G    G D +A  LF  M  +G    ++T
Sbjct: 631  MYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKST 690

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             S++LK+  S   +   K+V A  + + +E D  + N+LI AY K G + DA K+F +  
Sbjct: 691  FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              D+++   MI  YAQ GLG  AL+   +MQ++ +  + F   S+LNAC++ SA E+GK+
Sbjct: 751  NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKR 810

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            VH  I+K     D   G +L++MYAKCGS+++A   F    ++ +V+W+AMI   AQHG 
Sbjct: 811  VHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGL 870

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
              +AL  F  M ++G+ P+  T  S+L ACNH+GLV E    F S+E + G+ P  EHY 
Sbjct: 871  ASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYG 930

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++ +LGRAG+FQEA  L++ MPF  +A+VW  LLGA RI+ NV + +HAA     +   
Sbjct: 931  CLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNAR 990

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
              + +VLLSN+YA+AG WD+VAK+RR M+   ++KEPG SWIEV + ++ F   DRSH  
Sbjct: 991  NPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPE 1050

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + EIY +L  +S  + +AGY P  +  LH++++  +E  L  HSE+LA+A+GL+ TPPG 
Sbjct: 1051 TAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGT 1110

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLRIC DCHT+ +FISK+V REII RD NRFH F+NG CSC  +W
Sbjct: 1111 PIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 325/578 (56%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A T+   L  G ++H + V  G +SD  V  +L  M+ +CG+   +++  +A  +R 
Sbjct: 290 LLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD 349

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV +N+L +        EEA   + +M   G+  N  +  S++NAC+ S     G  IH 
Sbjct: 350 VVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHS 409

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  ++G+ SD+   N+L+ MYA+ G+L  A  +F  +   D++SWNA+IAG    E    
Sbjct: 410 HISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGE 469

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KL++QM+S  + P   T+   L AC        G+ +H  +++  IKS+  +   L++
Sbjct: 470 AMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMN 529

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY +CGS+ EA+ +F     +++I+WN +I+GH Q+G    A  LF  M +EG+  D+ T
Sbjct: 530 MYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKIT 589

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++VL    + +A+ + +Q+H L +++  + D  + N+LI+ Y +CG ++DA ++F    
Sbjct: 590 FASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR 649

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++++ T+MI  +A  G   +A +L+ +MQ+    P     SS+L AC + +  ++GK+
Sbjct: 650 HRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKK 709

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           V  HI+  G+  DT  GN+L++ Y+K GS+ DA + F ++P+R I+SW+ MI G AQ+G 
Sbjct: 710 VIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGL 769

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
           G  ALQ   QM E GV+ N  + VS+L AC+    + E K  H E +++K  +Q      
Sbjct: 770 GGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRK--MQGDVRVG 827

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           A +I +  + G  +EA E+ D    + N   W A++ A
Sbjct: 828 AALISMYAKCGSLEEAQEVFDNFT-EKNVVTWNAMINA 864



 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 186/578 (32%), Positives = 306/578 (52%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ CT K+ L    ++H  +V  G   D F++N L+ MY KC +  D+ ++F  +P R 
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SWNSL SCY    F ++A   F+EM  +G  P++ +  S++ AC    +   G+KIH 
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I+ GY  D    N+L++MY K  +L  A  VF  I   D+VS+N ++       + + 
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + LF QM S  I P+  TY + L A     + + G+++H   +   + SD  VG  L  
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M+ +CG +  A+       +++++ +N +I+   Q+G   EA   +  M  +GV  ++TT
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + ++ +A+G  + +H+   +    SD  I NSLI  Y +CG +  A ++F    
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP 447

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  ++I  YA+     EA+KLY +MQ   + P       LL+AC N SAY  GK 
Sbjct: 448 KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKM 507

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I++ G  S+    N+L+NMY +CGSI +A   F     R I+SW++MI G AQHG 
Sbjct: 508 IHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGS 567

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            + A ++F +M ++G+ P+ IT  SVL  C N   L    + H   +E   G+Q      
Sbjct: 568 YEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES--GLQLDVNLG 625

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             +I++  R G  Q+A E+  ++  + N   W A++G 
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMIGG 662



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 243/471 (51%), Gaps = 4/471 (0%)

Query: 93  RPNEFSLSS---MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           RP E + ++   ++  C         ++IH   ++ G   D+F +N L++MY K  ++ D
Sbjct: 76  RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSD 135

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF  +   D++SWN++I+          A +LF++M+++   P+  TY S L AC  
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS 195

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
               E G+++H  +I+   + DP V   L++MY KC  +  AR +F  +  ++++++N +
Sbjct: 196 PAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTM 255

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           +  + Q     E   LF  M  EG+  D+ T   +L +  +   +   K++H L+V    
Sbjct: 256 LGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGL 315

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            SD  +  +L   + +CG V  A +  +  +  D+V   ++I A AQ G  EEA + Y +
Sbjct: 316 NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQ 375

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M+   +  +     S+LNAC+   A   G+ +H HI + G  SD   GNSL++MYA+CG 
Sbjct: 376 MRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGD 435

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +  A   F+ +P R ++SW+A+I G A+     EA++++ QM  +GV P  +T + +L A
Sbjct: 436 LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           C ++   ++ K   E + +  GI+        ++++  R G   EA  + +
Sbjct: 496 CTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFE 545



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 7/260 (2%)

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G E   L    Q R    +      L+  C    +  + K++H  +++ G   D F  N 
Sbjct: 63  GSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNL 122

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L+NMY KC S+ DA + F ++P R ++SW+++I   AQ G  K+A Q+F +M   G +P+
Sbjct: 123 LINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182

Query: 500 HITLVSVLCA-CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
            IT +S+L A C+ A L    K H + +E  +   P  ++   ++++ G+      A ++
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQV 240

Query: 559 VDTMPFQANASVWGALLG--AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
              + ++ +   +  +LG  A + Y    +G         I P+K  T++ L + + +  
Sbjct: 241 FSGI-YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDK-VTYINLLDAFTTPS 298

Query: 617 MWDNVAKVRRFMKDNKLKKE 636
           M D   ++ +   +  L  +
Sbjct: 299 MLDEGKRIHKLAVNEGLNSD 318


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/714 (43%), Positives = 456/714 (63%)

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
             + V W      YV   F  +A+  + +M  +GI P++    S+I AC    D   GRK
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H   I  G++SD+    AL  MY K G+LE+A  VF  +   D+VSWNA+IAG   +  
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL LF +M+ + I PN  T  S +  CA +   E G+Q+HC  I+  I+SD +V  G
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LV+MYAKCG+++ A  +F  MP +++ +WN +I G+  N    EA + F  M   G+  +
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T+ +VL + A   A+   +Q+H  ++++ FES+D + N+L++ Y KCG+V  A K+F+
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                ++VA  ++I+ Y+Q G   EAL L++EMQ + I PDSF   S+L ACA+  A EQ
Sbjct: 382 RMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQ 441

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GKQ+H + I+ GF S+   G  LV++YAKCG+++ A + F  +P++ +VSW+ MI     
Sbjct: 442 GKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGI 501

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG G++AL +F +M E G   +HI   ++L AC+HAGLV +   +F+ M+  +G+ P  E
Sbjct: 502 HGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLE 561

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HYAC++D+LGRAG   EA  ++  M  + +A+VWGALLGA RI+ N+E+G+ AA+ LF +
Sbjct: 562 HYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFEL 621

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +P+ +  +VLLSNIYA A  W++VAK+R+ MK+  +KK+PG S + V   V TF VGDR+
Sbjct: 622 DPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRT 681

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H +S++IYA L+ + + + KAGYVP     L DVEE  KE +L  HSEKLA++FG+I T 
Sbjct: 682 HPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTS 741

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PG  IR+ KNLR+C DCH + +FISKIV REIIVRD NRFHH +NG CSCG YW
Sbjct: 742 PGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 179/483 (37%), Positives = 282/483 (58%), Gaps = 8/483 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC S+ DL  G +VH  ++  GF+SD  V  +L  MY KCG+  ++R++FD +P+R 
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRD 185

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN++ + Y       EA+  F EM ++GI+PN  +L S++  CA       G++IH 
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y+I+ G +SD+   N LV+MYAK GN+  A  +F+ +   D+ SWNA+I G  L+  +  
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  F +M+   I PN  T  S L ACA +   E G+Q+H   I+   +S+ +VG  LV+
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG+++ A  +F  MP+KN++AWN +ISG+ Q+G   EA +LF  M  +G+  D   
Sbjct: 366 MYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFA 425

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + +VL + A F A+   KQ+H  ++++ FES+  +   L+D Y KCG+V  A K+F+   
Sbjct: 426 IVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ T+MI AY   G GE+AL L+ +MQ+     D    +++L AC++    +QG Q
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545

Query: 421 VHVHIIK--FGFMSDTFAGNSLVNMYAKCGSIDDAD---RAFSEIPDRGIVSWSAMIGGL 475
            +   +K  +G          LV++  + G +D+A+   +  S  PD  +  W A++G  
Sbjct: 546 -YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANV--WGALLGAC 602

Query: 476 AQH 478
             H
Sbjct: 603 RIH 605


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/772 (40%), Positives = 475/772 (61%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S  +L  G ++H  ++  G+  D  V NSL+ MY KCG+   +R++F  I  R 
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRD 193

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS+N++   Y    +++E +  F +M   GI P++ +  ++++A         G++IH 
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +++ G +SD+    ALV M  + G+++ A   FK I   D+V +NA+IA    H HN  
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVE 313

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A + + +M+S  +  N  TY S L AC+  +  E G+ +H  + +    SD  +G  L+ 
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYA+CG + +AR +F+ MP+++LI+WN +I+G+ +     EA  L+  M  EGV   + T
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L + A+  A    K +H   +++  +S+ ++ N+L++ Y +CG + +A  +F+ + 
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D+++  SMI  +AQ G  E A KL+ EMQ+ E+ PD+   +S+L+ C N  A E GKQ
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I + G   D   GN+L+NMY +CGS+ DA   F  +  R ++SW+AMIGG A  G 
Sbjct: 554 IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGE 613

Query: 481 GKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +A+++F QM  +G  P +  T  S+L ACNHAGLV E    F SME ++G+ P  EHY
Sbjct: 614 DMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 673

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++ +LGRA +FQEA  L++ MPF  +A+VW  LLGA RI+ N+ + +HAA     +  
Sbjct: 674 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNA 733

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
              + ++LLSN+YA+AG WD+VAK+RR M+   ++KEPG SWIEV + ++ F   DRSH 
Sbjct: 734 RNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHP 793

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            + EIYA+L  +S  + +AGY P  +  LHD+ ++ +E  L  HSE+LA+A+GLI TPPG
Sbjct: 794 ETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPG 853

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLRIC DCHT+ +FISK+V REII RD NRFH F+NG CSC  YW
Sbjct: 854 TPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 186/578 (32%), Positives = 310/578 (53%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CT K+ L    ++H  +V  G   D F++N L+ MY KC + +D+ ++F  +P R 
Sbjct: 33  LLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRD 92

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SWNSL SCY    F ++A   F+EM  +G  PN+ +  S++ AC    +   G+KIH 
Sbjct: 93  VISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHS 152

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK GY  D    N+L+ MY K G+L  A  VF  I   D+VS+N ++       +   
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L LF QM S  I+P+  TY + L A     + + G+++H   ++  + SD  VG  LV 
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M  +CG +D A+  F  + +++++ +N +I+   Q+G ++EA   +  M  +GV  ++TT
Sbjct: 273 MCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTT 332

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + ++ +A+   K +H+   +    SD  I N+LI  Y +CG +  A ++F    
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP 392

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  ++I  YA+     EA++LY +MQ   + P       LL+ACAN SAY  GK 
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM 452

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I++ G  S+    N+L+NMY +CGS+ +A   F     R ++SW++MI G AQHG 
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
            + A ++F +M  + + P++IT  SVL  C +   +   K  H    E   G+Q      
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES--GLQLDVNLG 570

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             +I++  R G  Q+A  +  ++  + +   W A++G 
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGG 607



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 205/397 (51%), Gaps = 12/397 (3%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           TY + L+ C    L    +++H  +++  +  D  +   L++MY KC S+ +A  +F  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P +++I+WN +IS + Q G   +A  LF  M   G   ++ T  ++L +  S   +   K
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H+  +K  ++ D  + NSL+  YGKCG +  A ++F   S  D+V+  +M+  YAQ  
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             +E L L+ +M    I+PD     +LL+A    S  ++GK++H   ++ G  SD   G 
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LV M  +CG +D A +AF  I DR +V ++A+I  LAQHG   EA + + +M  DGV  
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           N  T +S+L AC+ +  + EA     S   + G     +    +I +  R G   +A EL
Sbjct: 329 NRTTYLSILNACSTSKAL-EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 559 VDTMPFQANASVWGALLG----------AARIYKNVE 585
             TMP + +   W A++           A R+YK ++
Sbjct: 388 FYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQ 423



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 128/224 (57%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D+ T   +L++    + +   K++HA  V+     D ++ N LI+ Y KC  V DA ++F
Sbjct: 26  DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           KE    D+++  S+I+ YAQ G  ++A +L+ EMQ+    P+     S+L AC + +  E
Sbjct: 86  KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GK++H  IIK G+  D    NSL++MY KCG +  A + F+ I  R +VS++ M+G  A
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           Q    KE L +FGQM  +G+ P+ +T +++L A     ++ E K
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 7/249 (2%)

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q R    D     +LL  C       + K++H  +++ G   D F  N L+NMY KC S+
Sbjct: 19  QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            DA + F E+P R ++SW+++I   AQ G  K+A Q+F +M   G +PN IT +S+L AC
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 511 -NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
            + A L    K H + ++  +   P  ++   ++ + G+ G    A ++   +  +   S
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPRDVVS 196

Query: 570 VWGALLG--AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
            +  +LG  A + Y    +G         I P+K  T++ L + + +  M D   ++ + 
Sbjct: 197 -YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK-VTYINLLDAFTTPSMLDEGKRIHKL 254

Query: 628 MKDNKLKKE 636
             +  L  +
Sbjct: 255 TVEEGLNSD 263


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  639 bits (1648), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 305/771 (39%), Positives = 476/771 (61%), Gaps = 1/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC   K++  G ++  +++  G+D+D FV  +L+ M+ KCG   D+ ++F+ +P R 
Sbjct: 211 MLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +++W S+ +        ++A   F+ M   G++P++ +  S++ AC        G+++H 
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHA 330

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++G D++++   AL+ MY K G++EDA+ VF  ++  ++VSW A+IAG   H   + 
Sbjct: 331 RMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEE 390

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A   F +M  S I PN  T+ S L AC+     + GRQ+H  +IK    +D  V   L+ 
Sbjct: 391 AFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLS 450

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +AR +F  + ++N++AWN +I+ ++Q+     A + F  + +EG+  D +T
Sbjct: 451 MYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSST 510

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++L    S  A+ + K V +L ++  FESD +I N+L+  +  CG +  A+ +F +  
Sbjct: 511 FTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV+  ++I  + Q G  + A   +  MQ+  + PD    + LLNACA+  A  +G++
Sbjct: 571 ERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRR 630

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I +     D   G  L++MY KCGSIDDA   F  +P + + SW++MI G AQHGR
Sbjct: 631 LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGR 690

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEAL++F QM ++GV P+ IT V  L AC HAGL+ E  HHFESM K F I+P  EHY 
Sbjct: 691 GKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYG 749

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+ GRAG   EA+E ++ M  + ++ +WGALLGA +++ +VE+ +  A+    ++P 
Sbjct: 750 CMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPN 809

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               +V+LSNIYA+AGMW  V K+R+ M D  + K+PG SWIEV  +V+ F   D++H +
Sbjct: 810 DDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQ 869

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +EI+A+L  +   + K GYVP     LHDVE+SEKE  L HHSE+LA+A+GL+ TPP  
Sbjct: 870 IEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLT 929

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I + KNLR+C DCHT+ + ISKI  R+II RD NRFHHF++G CSCG +W
Sbjct: 930 PIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 174/520 (33%), Positives = 292/520 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   K+L  G ++H  + F+    D F+ N L+ MYAKCGN   ++++FD +P++ 
Sbjct: 110 LLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKD 169

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SWN L   YV     EEA    ++MV  G++P++++   M+NACA + +   G ++  
Sbjct: 170 VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFS 229

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G+D+D+F   AL++M+ K G ++DA+ VF ++   D+++W ++I G   H     
Sbjct: 230 LILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LFQ M+   + P+   + S LKAC   E  E G+++H  + ++ + ++  VG  L+ 
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGSM++A  +F+L+  +N+++W  +I+G  Q+G   EA   F  M   G+  ++ T
Sbjct: 350 MYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVT 409

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + +   A+   +Q+H   +K  + +DD +  +L+  Y KCG + DA  +F+  S
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS 469

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++VA  +MITAY Q    + A+  +  +    I PDS   +S+LN C +  A E GK 
Sbjct: 470 KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKW 529

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           V   II+ GF SD    N+LV+M+  CG +  A   F+++P+R +VSW+ +I G  QHG 
Sbjct: 530 VQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGE 589

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            + A   F  M E GV P+ IT   +L AC     + E +
Sbjct: 590 NQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGR 629



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 280/560 (50%), Gaps = 13/560 (2%)

Query: 20  IVVFTGFDSDEFVANSLVVMYAKC-GN-FIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           +V+   FD+      S    Y+K  GN F+D +    A         N+  +       L
Sbjct: 35  LVILEEFDTFRLYTTSFSGSYSKGQGNEFVDIKNTQRA---------NAFLNRLSKAGQL 85

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
            EA+     +    I+ +  + SS++  C    +   G +IH +        D+F  N L
Sbjct: 86  SEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNML 145

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           + MYAK GN   A  +F ++   D+ SWN ++ G V H   + A +L +QM    + P+ 
Sbjct: 146 ISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDK 205

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           +T+   L ACA  +  + G +L   ++     +D  VG  L++M+ KCG +D+A  +F+ 
Sbjct: 206 YTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNN 265

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           +P ++LI W  +I+G  ++    +A +LF  M  EGV  D+    ++LK+    +A+   
Sbjct: 266 LPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQG 325

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K+VHA   +   +++ Y+  +L+  Y KCG +EDA+++F      ++V+ T+MI  +AQ 
Sbjct: 326 KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  EEA   + +M +  I P+     S+L AC+  SA +QG+Q+H  IIK G+++D    
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            +L++MYAKCGS+ DA   F  I  + +V+W+AMI    QH +   A+  F  +L++G+ 
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+  T  S+L  C     +   K   +S+  + G +        ++ +    G    AM 
Sbjct: 506 PDSSTFTSILNVCKSPDALELGK-WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMN 564

Query: 558 LVDTMPFQANASVWGALLGA 577
           L + MP + +   W  ++  
Sbjct: 565 LFNDMP-ERDLVSWNTIIAG 583


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 329/774 (42%), Positives = 483/774 (62%), Gaps = 7/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLK C    D   G Q+H + V  GFD  E  V  +LV MY KCG   D R +F+ +P+R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W SL + YV      + +  F  M   G+ PN F+ +S+++A A  G   LGR++H
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             S+K G  S +F  N+L++MY+K G +E+A AVF+ +E  D+VSWN ++AG +L+EH  
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF   ++S    +  TY++ +K CA ++   L RQLH  ++K    SD  V   ++
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D Y+KCG +D+A  IF LMP  +N+++W  +I G +QN     AA+LF  M  + V  ++
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T STVL +        +  Q+HA  +KT ++    +  +L+ +Y K G+ E+A+ IFK 
Sbjct: 405 FTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKM 460

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQ 417
               D+VA ++M++ Y+Q G  + A  ++++M  + + P+ F  SS ++ACA+ +A  +Q
Sbjct: 461 IDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQ 520

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q H   IK+ +      G++LV MYA+ GSID A   F    DR +VSW++MI G AQ
Sbjct: 521 GRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQ 580

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG  KEAL  F QM   G+  +  T ++V+  C HAGLV E + +F+SM     I P  E
Sbjct: 581 HGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTME 640

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY+CM+D+  RAGK  E M L++ MPF A A VW  LLGA R++KNVE+G+ AA+ L  +
Sbjct: 641 HYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLL 700

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP+ S+T+VLLSNIYA+AG W    +VR+ M   K+KKE G SWI++K+KV++F   D+S
Sbjct: 701 EPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKS 760

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H  S++IYAKL  ++  L + GY P     LHD+ E +KE +L  HSE+LA+AFGLIATP
Sbjct: 761 HPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATP 820

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P   +++ KNLR+C DCH   + +S I  REII+RD +RFHHF  G+CSCG +W
Sbjct: 821 PRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 260/519 (50%), Gaps = 14/519 (2%)

Query: 45  NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLE------EAVCFFKEMVLSGIRPNEFS 98
           N   +R+  D +P R   + +S     +  D+        EA+  F ++   G R    +
Sbjct: 44  NAPGARQALDGMPSRDAAAGSSSNPVAI-VDYGRRGKGRGEALDHFVDVHRCG-RVQGAA 101

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +S ++  C    D + G ++H   +K G+D +++    ALVDMY K G +ED   VF+ +
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              ++V+W +++ G V        + LF +M++  + PN FT+TS L A A     +LGR
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           ++H   +K   +S   V   L++MY+KCG ++EA+ +F  M  +++++WN +++G L N 
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
             +EA  LF           Q+T STV+K  A+ + + + +Q+H+  +K  F SD  ++ 
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMT 341

Query: 338 SLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           +++DAY KCG ++DA  IF     + ++V+ T+MI    Q      A  L+  M++  + 
Sbjct: 342 AIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVK 401

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P+ F  S++L A   +       Q+H  IIK  +      G +L+  Y+K G+ ++A   
Sbjct: 402 PNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSI 457

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  I  + +V+WSAM+   +Q G    A  +F +M   G+ PN  T+ S + AC      
Sbjct: 458 FKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAG 517

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            +    F ++  K+  Q      + ++ +  R G    A
Sbjct: 518 IDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSA 556


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 325/784 (41%), Positives = 492/784 (62%), Gaps = 14/784 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+   S  +L LG   H  +V +G   D F++N+L+ MY+KCG+   +R++FD  PER 
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 61  VVSWNSLFSCYVHC-----DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           +V+WN++   Y           +E +  F+ +  S       +L+ ++  C  SG     
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
             +HGY+IK+G + D+F + ALV++Y+K G + DA  +F  +   D+V WN ++ G V  
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDPI 233
                A +LF +   S + P+ F+    L  C  AG +  ELG+Q+H   +K  + SD  
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V   LV+MY+K G    AR +F+ M   +LI+WN +IS   Q+  + E+ +LF  +  EG
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382

Query: 294 VGFDQTTLSTVLKSVASFQAIGVC------KQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
           +  D  TL+++  + A+ +A G        KQ+HA ++K  F+SD ++ + ++D Y KCG
Sbjct: 383 LKPDHFTLASITLATAA-KACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            + +A  +F   SA D VA TSMI+     G  ++AL++Y  M+   + PD +  ++L+ 
Sbjct: 442 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 501

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           A + ++A EQG+Q+H ++IK   +SD F G SLV+MYAKCG+I+DA R F ++  R I  
Sbjct: 502 ASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL 561

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           W+AM+ GLAQHG  +EA+ +F  M   G+ P+ ++ + +L AC+HAGL +EA  +  SM 
Sbjct: 562 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMP 621

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
             +GI+P  EHY+C++D LGRAG  QEA ++++TMPF+A+AS+  ALLGA RI  +VE G
Sbjct: 622 NDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETG 681

Query: 588 QHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDK 647
           +  A  LFA+EP  S+ +VLLSNIYA+A  WD+V   R+ MK   +KK+PG SWI+VK+ 
Sbjct: 682 KRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNM 741

Query: 648 VYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKL 707
           ++ F V DRSH ++  IY K++E+   + + GYVP  E  L DVE+ EKE+ LY+HSEKL
Sbjct: 742 LHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKL 801

Query: 708 AVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           A+A+GLI+TP   TIRV KNLR+C DCH + ++ISK+  REI++RD NRFHHFR+G CSC
Sbjct: 802 AIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSC 861

Query: 768 GGYW 771
           G YW
Sbjct: 862 GDYW 865


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  636 bits (1641), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 320/783 (40%), Positives = 500/783 (63%), Gaps = 17/783 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
           +LK+C   ++  LG  VH  ++ +G + D  V N+L+ +Y+KCG+   +R +F+ +  +R
Sbjct: 32  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 91

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            +VSW+++ SC+ +     +A+  F +M+  G  PNE+  +++I AC+ +  + +G  I+
Sbjct: 92  DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151

Query: 120 GYSIKLGY-DSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIA-----GC 172
           G+ +K GY ++D+     L+DM+ K  G+L  A  VF  +   ++V+W  +I      GC
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 211

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                   A+ LF  M+ S   P+ FTY+S L AC  + L  LG+QLH  +I++ +  D 
Sbjct: 212 ARD-----AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266

Query: 233 IVGVGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPW 288
            VG  LVDMYAKC   GS+D++R +F  MPE N+++W  +I+ ++Q+G  D EA  LF  
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 326

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M    +  +  + S+VLK+  +       +QV++ +VK    S + + NSLI  Y + G 
Sbjct: 327 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 386

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +EDA K F      +LV+  +++  YA+    EEA  L+ E+ D  I   +F  +SLL+ 
Sbjct: 387 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 446

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
            A++ A  +G+Q+H  ++K G+ S+    N+L++MY++CG+I+ A + F+E+ DR ++SW
Sbjct: 447 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 506

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           ++MI G A+HG    AL+MF +MLE G  PN IT V+VL AC+H G+++E + HF SM K
Sbjct: 507 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 566

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
           + GI P  EHYACM+D+LGR+G   EAME +++MP  A+A VW  LLGA R++ N E+G+
Sbjct: 567 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGR 626

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
           HAAEM+   EP+  + ++LLSN++ASAG W +V K+R+ MK+  L KE G SWIEV+++V
Sbjct: 627 HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 686

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F VG+ SH ++ +IY +LD+++  + + GY+P  +  LHD+EE +KEQ L+ HSEK+A
Sbjct: 687 HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIA 746

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           VAFGLI+T     IR+ KNLR+C DCHT+ ++IS    REI+VRD NRFHH +NG CSC 
Sbjct: 747 VAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCN 806

Query: 769 GYW 771
            YW
Sbjct: 807 DYW 809



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 262/490 (53%), Gaps = 11/490 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+  + S ++ +C    +  LG+ +H   ++ G + D    N L+ +Y+K G+ E A  +
Sbjct: 24  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83

Query: 154 FKDIEHP-DIVSWNAVIAGCVLHEHNDW-ALKLFQQMKSSEINPNMFTYTSALKACAGME 211
           F+ + +  D+VSW+A+++ C  +   +W A+  F  M      PN + + + ++AC+   
Sbjct: 84  FEGMGNKRDLVSWSAMVS-CFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 142

Query: 212 LKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAK-CGSMDEARMIFHLMPEKNLIAWNIV 269
              +G  ++  ++K   +++D  VG  L+DM+ K  G +  A  +F  MPE+NL+ W ++
Sbjct: 143 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 202

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+   Q G   +A  LF  M   G   D+ T S+VL +      + + KQ+H+  ++   
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262

Query: 330 ESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVACTSMITAYAQFG-LGEEALK 385
             D  +  SL+D Y KC   G V+D+ K+F++    ++++ T++ITAY Q G   +EA++
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 322

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L+ +M    I P+ F  SS+L AC NLS    G+QV+ + +K G  S    GNSL++MYA
Sbjct: 323 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYA 382

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           + G ++DA +AF  + ++ +VS++A++ G A++ + +EA  +F ++ + G+  +  T  S
Sbjct: 383 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 442

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           +L      G + + +     + K  G +  Q     +I +  R G  + A ++ + M   
Sbjct: 443 LLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-D 500

Query: 566 ANASVWGALL 575
            N   W +++
Sbjct: 501 RNVISWTSMI 510



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 218/413 (52%), Gaps = 10/413 (2%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A      M      P++ TY+  LK+C      +LG+ +H  L++  ++ D +V   L+ 
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 241 MYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +Y+KCG  + AR+IF  M  K +L++W+ ++S    N  + +A   F  M   G   ++ 
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAF-ESDDYIVNSLIDAYGK-CGHVEDAVKIFK 357
             + V+++ ++     V + ++   VKT + E+D  +   LID + K  G +  A K+F 
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +    +LV  T MIT +AQ G   +A+ L+L+M+     PD F  SS+L+AC  L     
Sbjct: 190 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 249

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKC---GSIDDADRAFSEIPDRGIVSWSAMIGG 474
           GKQ+H  +I+ G   D   G SLV+MYAKC   GS+DD+ + F ++P+  ++SW+A+I  
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 309

Query: 475 LAQHGR-GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             Q G   KEA+++F +M+   + PNH +  SVL AC +       +  + S   K GI 
Sbjct: 310 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYAVKLGIA 368

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVE 585
            +      +I +  R+G+ ++A +  D + F+ N   + A++ G A+  K+ E
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLKSEE 420


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 320/783 (40%), Positives = 500/783 (63%), Gaps = 17/783 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
           +LK+C   ++  LG  VH  ++ +G + D  V N+L+ +Y+KCG+   +R +F+ +  +R
Sbjct: 50  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 109

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            +VSW+++ SC+ +     +A+  F +M+  G  PNE+  +++I AC+ +  + +G  I+
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169

Query: 120 GYSIKLGY-DSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIA-----GC 172
           G+ +K GY ++D+     L+DM+ K  G+L  A  VF  +   ++V+W  +I      GC
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 229

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                   A+ LF  M+ S   P+ FTY+S L AC  + L  LG+QLH  +I++ +  D 
Sbjct: 230 ARD-----AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284

Query: 233 IVGVGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPW 288
            VG  LVDMYAKC   GS+D++R +F  MPE N+++W  +I+ ++Q+G  D EA  LF  
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 344

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M    +  +  + S+VLK+  +       +QV++ +VK    S + + NSLI  Y + G 
Sbjct: 345 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 404

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +EDA K F      +LV+  +++  YA+    EEA  L+ E+ D  I   +F  +SLL+ 
Sbjct: 405 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 464

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
            A++ A  +G+Q+H  ++K G+ S+    N+L++MY++CG+I+ A + F+E+ DR ++SW
Sbjct: 465 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 524

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           ++MI G A+HG    AL+MF +MLE G  PN IT V+VL AC+H G+++E + HF SM K
Sbjct: 525 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 584

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
           + GI P  EHYACM+D+LGR+G   EAME +++MP  A+A VW  LLGA R++ N E+G+
Sbjct: 585 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGR 644

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
           HAAEM+   EP+  + ++LLSN++ASAG W +V K+R+ MK+  L KE G SWIEV+++V
Sbjct: 645 HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 704

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F VG+ SH ++ +IY +LD+++  + + GY+P  +  LHD+EE +KEQ L+ HSEK+A
Sbjct: 705 HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIA 764

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           VAFGLI+T     IR+ KNLR+C DCHT+ ++IS    REI+VRD NRFHH +NG CSC 
Sbjct: 765 VAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCN 824

Query: 769 GYW 771
            YW
Sbjct: 825 DYW 827



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 262/490 (53%), Gaps = 11/490 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+  + S ++ +C    +  LG+ +H   ++ G + D    N L+ +Y+K G+ E A  +
Sbjct: 42  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101

Query: 154 FKDIEHP-DIVSWNAVIAGCVLHEHNDW-ALKLFQQMKSSEINPNMFTYTSALKACAGME 211
           F+ + +  D+VSW+A+++ C  +   +W A+  F  M      PN + + + ++AC+   
Sbjct: 102 FEGMGNKRDLVSWSAMVS-CFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 160

Query: 212 LKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAK-CGSMDEARMIFHLMPEKNLIAWNIV 269
              +G  ++  ++K   +++D  VG  L+DM+ K  G +  A  +F  MPE+NL+ W ++
Sbjct: 161 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 220

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+   Q G   +A  LF  M   G   D+ T S+VL +      + + KQ+H+  ++   
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280

Query: 330 ESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVACTSMITAYAQFG-LGEEALK 385
             D  +  SL+D Y KC   G V+D+ K+F++    ++++ T++ITAY Q G   +EA++
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 340

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L+ +M    I P+ F  SS+L AC NLS    G+QV+ + +K G  S    GNSL++MYA
Sbjct: 341 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYA 400

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           + G ++DA +AF  + ++ +VS++A++ G A++ + +EA  +F ++ + G+  +  T  S
Sbjct: 401 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 460

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           +L      G + + +     + K  G +  Q     +I +  R G  + A ++ + M   
Sbjct: 461 LLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-D 518

Query: 566 ANASVWGALL 575
            N   W +++
Sbjct: 519 RNVISWTSMI 528



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 218/413 (52%), Gaps = 10/413 (2%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A      M      P++ TY+  LK+C      +LG+ +H  L++  ++ D +V   L+ 
Sbjct: 28  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87

Query: 241 MYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +Y+KCG  + AR+IF  M  K +L++W+ ++S    N  + +A   F  M   G   ++ 
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAF-ESDDYIVNSLIDAYGK-CGHVEDAVKIFK 357
             + V+++ ++     V + ++   VKT + E+D  +   LID + K  G +  A K+F 
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +    +LV  T MIT +AQ G   +A+ L+L+M+     PD F  SS+L+AC  L     
Sbjct: 208 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 267

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKC---GSIDDADRAFSEIPDRGIVSWSAMIGG 474
           GKQ+H  +I+ G   D   G SLV+MYAKC   GS+DD+ + F ++P+  ++SW+A+I  
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 327

Query: 475 LAQHGR-GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             Q G   KEA+++F +M+   + PNH +  SVL AC +       +  + S   K GI 
Sbjct: 328 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYAVKLGIA 386

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVE 585
            +      +I +  R+G+ ++A +  D + F+ N   + A++ G A+  K+ E
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLKSEE 438


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 331/775 (42%), Positives = 486/775 (62%), Gaps = 9/775 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLK C S  D  LG Q+HG+ +  G D  D  V  SLV MY K  + +D R++F+A+P+R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W SL + Y+    L + +  F  M   G+ PN  + +S+++  A  G   LGR++H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             S+K G  S +F  N+L++MYAK G +E+A  VF  +E  D+VSWN ++AG VL+ H+ 
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF   +SS       TY + +K CA ++   L RQLH S++K    S   V   L+
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D Y+K G +  A  IF LM   +N+++W  +I+G +QNG    AA+LF  M  +GV  + 
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPND 408

Query: 299 TTLSTVLK-SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T ST+L  SVAS        Q+HA  +KT +E    +  +L+ +Y K  + E+A+ IFK
Sbjct: 409 FTYSTILTASVASLP-----PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFK 463

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YE 416
                D+V+ ++M+T YAQ G  + A  ++++M    + P+ F  SS+++ACA+ +A  +
Sbjct: 464 MIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVD 523

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+Q H   IK          ++LV+MYA+ GSI+ A   F    DR +VSW++M+ G A
Sbjct: 524 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYA 583

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           QHG  ++AL +F QM  +G+  + +T +SV+  C HAGLV E + +F+SM + +GI P  
Sbjct: 584 QHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTM 643

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYACM+D+  RAGK  EAM L++ M F A   VW  LLGA +++KNVE+G+ AAE L +
Sbjct: 644 EHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLS 703

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP  S+T+VLLSNIY++AG W    +VR+ M   K+KKE G SWI++K+KV++F   D+
Sbjct: 704 LEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDK 763

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  S++IYAKL  ++  L + GY P     LH+V E +KE +L  HSE+LA+AFGLIAT
Sbjct: 764 SHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIAT 823

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PPGA + + KNLR+C DCHT  + +SKI  REI++RD +RFHHF +G CSCG +W
Sbjct: 824 PPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 258/509 (50%), Gaps = 7/509 (1%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           +R+ FD IP R+ +  ++LF         +    F       G R    +L  ++  C  
Sbjct: 57  ARQAFDEIPHRNTLD-HALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGS 115

Query: 109 SGDSLLGRKIHGYSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
             D +LG+++HG  I+ G+D  D+    +LVDMY K  ++ D   VF+ +   ++V+W +
Sbjct: 116 VPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTS 175

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           ++ G +        ++LF +M++  + PN  T+ S L   A   + +LGR++H   +K  
Sbjct: 176 LLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFG 235

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
             S   V   L++MYAKCG ++EAR++F  M  +++++WN +++G + NG D+EA  LF 
Sbjct: 236 CCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFH 295

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
                     Q+T +TV+K  A+ + +G+ +Q+H+  +K  F S   ++ +L+DAY K G
Sbjct: 296 DSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAG 355

Query: 348 HVEDAVKIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
            + +A+ IF   S + ++V+ T+MI    Q G    A  L+  M++  + P+ F  S++L
Sbjct: 356 QLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTIL 415

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            A    S      Q+H  +IK  +   +  G +L+  Y+K  + ++A   F  I  + +V
Sbjct: 416 TA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVV 471

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           SWSAM+   AQ G    A  +F +M   G+ PN  T+ SV+ AC       +    F ++
Sbjct: 472 SWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAI 531

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             K          + ++ +  R G  + A
Sbjct: 532 SIKHRCHDALCVSSALVSMYARKGSIESA 560


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  626 bits (1615), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 323/773 (41%), Positives = 472/773 (61%), Gaps = 6/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V   C    D  LG QVH   V  G      V  SLV MY K  N  D RR+FD + ER+
Sbjct: 99  VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL + Y            F +M   G+ PN +++S++I A    G   +G ++H 
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G++  +   N+L+ +Y+++G L DA  VF  +E  D V+WN++IAG V +  +  
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLE 278

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
             ++F +M+ + + P   T+ S +K+CA +    L + + C  +K    +D IV   L+ 
Sbjct: 279 VFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV 338

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
             +KC  MD+A  +F LM E KN+++W  +ISG LQNGG+ +A +LF  M REGV  +  
Sbjct: 339 ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHF 398

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S +L    +        ++HA  +KT +E    +  +L+DAY K G+  DAVK+F+  
Sbjct: 399 TYSAIL----TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEII 454

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN-LSAYEQG 418
            A DL+A ++M+  YAQ G  EEA KL+ ++    I P+ F  SS++NACA+  +A EQG
Sbjct: 455 EAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQG 514

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ H + IK    +     ++LV MYAK G+ID A   F    +R +VSW++MI G +QH
Sbjct: 515 KQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQH 574

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G+ K+AL++F +M +  +  + +T + V+ AC HAGLV + + +F SM     I P  +H
Sbjct: 575 GQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKH 634

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y+CMID+  RAG  ++AM +++ MPF   A+VW  LLGAAR+++NVE+G+ AAE L +++
Sbjct: 635 YSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQ 694

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PE S+ +VLLSN+YA+AG W     VR+ M   K+KKEPG SWIEVK+K Y+F  GD +H
Sbjct: 695 PEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTH 754

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             S +IY+KL E+S  L  AGY P  +   HD+E+ +KE +L HHSE+LA+AFGLIATPP
Sbjct: 755 PLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPP 814

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              I++ KNLR+C DCH   + +S +  R I+VRD NRFHHF++G CSCG YW
Sbjct: 815 EIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 280/534 (52%), Gaps = 13/534 (2%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFK 85
           S +F++N+++     C   I +  LFD IP R  ++   N L   Y      +EA+  F 
Sbjct: 29  SLKFISNTVL-----CVPHI-AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFV 82

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            ++ S ++P+E +LS + N CAGS D  LGR++H   +K G    +    +LVDMY K  
Sbjct: 83  SLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTE 142

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           N+ D   VF ++   ++VSW +++AG   +    +  +LF QM+   + PN +T ++ + 
Sbjct: 143 NVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIA 202

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           A     +  +G Q+H  ++K   +    V   L+ +Y++ G + +AR +F  M  ++ + 
Sbjct: 203 ALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVT 262

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +I+G+++NG D+E   +F  M   GV     T ++V+KS AS + + + K +   ++
Sbjct: 263 WNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKAL 322

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEAL 384
           K+ F +D  ++ +L+ A  KC  ++DA+ +F       ++V+ T+MI+   Q G  ++A+
Sbjct: 323 KSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAV 382

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L+ +M+   + P+ F  S++L     +   E    +H  +IK  +   +  G +L++ Y
Sbjct: 383 NLFSQMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAY 438

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
            K G+  DA + F  I  + +++WSAM+ G AQ G  +EA ++F Q++++G+ PN  T  
Sbjct: 439 VKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFS 498

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           SV+ AC      AE    F +   K  +       + ++ +  + G    A E+
Sbjct: 499 SVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEV 552


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 309/771 (40%), Positives = 476/771 (61%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT  +   LG Q+HG +V  G  S+ FV N+LV +Y++ GN I + ++F  +  R 
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+NSL S      F + A+  F++M L  ++P+  +++S+++ACA  G    G+++H 
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK+G  SD+    +L+D+Y K  ++E A   F   E  ++V WN ++       +   
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +  +F QM+   + PN +TY S L+ C  +   +LG Q+H  +IK   + +  V   L+D
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLID 458

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK G +D AR I   + E+++++W  +I+G+ Q+    EA  LF  M  +G+  D   
Sbjct: 459 MYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIG 518

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+ + + A  QA+   +Q+HA S  + +  D  I N+L+  Y +CG  +DA   F++  
Sbjct: 519 FSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID 578

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D ++  ++I+ +AQ G  EEAL+++ +M    +  + F   S ++A AN +  +QGKQ
Sbjct: 579 AKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ 638

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK G+ S+T A N L+ +Y+KCGSI+DA R F E+P++ +VSW+AMI G +QHG 
Sbjct: 639 IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGY 698

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EA+ +F +M + G++PNH+T V VL AC+H GLV E   +F SM K+ G+ P  EHY 
Sbjct: 699 GSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYV 758

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+LGRA     A E ++ MP + +A +W  LL A  ++KN+E+G+ AA  L  +EPE
Sbjct: 759 CVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPE 818

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+T+VLLSN+YA +G WD   + R+ MKD  +KKEPG SWIEVK+ ++ F VGDR H  
Sbjct: 819 DSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPL 878

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           +++IY  +D++++   + GYV      L+DVE+ +K+   Y HSEKLAVAFGL++     
Sbjct: 879 AEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTM 938

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IRV KNLR+C DCH   +F+SKI +R I+VRD  RFHHF  G CSC  YW
Sbjct: 939 PIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/576 (32%), Positives = 313/576 (54%), Gaps = 3/576 (0%)

Query: 1   VLKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+AC+  K  F +  Q+H  ++  GF S   V N L+ +Y+K G+   ++ +F+ +  +
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK 176

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSW ++ S        +EA+  F +M  S + P  +  SS+++AC       LG ++H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G+ +K G  S+ F  NALV +Y++ GNL  A  +F  +   D +S+N++I+G      +D
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF++M+   + P+  T  S L ACA +     G+QLH  +IKM + SD I+   L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KC  ++ A   F     +N++ WN+++  + Q G   E+  +F  M  EG+  +Q 
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L++  S  A+ + +Q+H   +K+ F+ + Y+ + LID Y K G ++ A  I +  
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ T+MI  Y Q  L  EALKL+ EM+++ I  D+   SS ++ACA + A  QG+
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H      G+  D   GN+LV++YA+CG   DA  AF +I  +  +SW+A+I G AQ G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +EALQ+F QM + GV  N  T  S + A  +   + + K    +M  K G     E  
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGK-QIHAMMIKTGYDSETEAS 655

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             +I +  + G  ++A      MP + N   W A++
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMI 690



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 174/579 (30%), Positives = 301/579 (51%), Gaps = 9/579 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + C +   L    ++H  +  +GFD ++ + + L+ +Y   G   ++ +LFD IP  +
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
           V  WN + S  +      + +  F  M+   + P+E + +S++ AC+G      +  +IH
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              I  G+ S     N L+D+Y+K G+++ A  VF+ +   D VSW A+I+G   +   D
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ LF QM  S + P  + ++S L AC  +EL +LG QLH  ++K  + S+  V   LV
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            +Y++ G++  A  IF  M  ++ I++N +ISG  Q G    A  LF  M  + +  D  
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCV 315

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++++L + AS  A    KQ+H+  +K    SD  I  SL+D Y KC  +E A + F  +
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++V    M+ AY Q G   E+  ++L+MQ   + P+ +   S+L  C +L A + G+
Sbjct: 376 ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  +IK GF  + +  + L++MYAK G +D A      + +  +VSW+AMI G  QH 
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              EAL++F +M   G+  ++I   S + AC  AG+  +A +  + +  +  I    E  
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISAC--AGI--QALNQGQQIHAQSYISGYSEDL 551

Query: 540 A---CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           +    ++ +  R G+ Q+A    + +  + N S W AL+
Sbjct: 552 SIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALI 589



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 252/491 (51%), Gaps = 9/491 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           GIR N  +   +   C  SG  L  +K+H    K G+D +    + L+D+Y   G +++A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           + +F DI   ++  WN VI+G +  +     L LF  M +  + P+  T+ S L+AC+G 
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 211 ELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   ++  Q+H  +I     S P+V   L+D+Y+K G +D A+++F  +  K+ ++W  +
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG  QNG + EA  LF  M++  V       S+VL +    +   + +Q+H   VK   
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            S+ ++ N+L+  Y + G++  A +IF +    D ++  S+I+  AQ G  + AL+L+ +
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           MQ   + PD    +SLL+ACA++ A  +GKQ+H ++IK G  SD     SL+++Y KC  
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+ A   F       +V W+ M+    Q G   E+  +F QM  +G++PN  T  S+L  
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 510 CNHAGLVAEAKH-HFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQA 566
           C   G +   +  H + ++  F        Y C  +ID+  + G+   A  ++  +  + 
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARGILQRLR-EE 479

Query: 567 NASVWGALLGA 577
           +   W A++  
Sbjct: 480 DVVSWTAMIAG 490



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 9/190 (4%)

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M++R I  +      L   C N  +    K++H  I K GF  +   G+ L+++Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +D+A + F +IP   +  W+ +I GL       + L +F  M+ + V P+  T  SVL A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 510 CN--HAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQ 565
           C+   A      + H + +   FG  P+     C  +ID+  + G    A +LV    F 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPL----VCNPLIDLYSKNGHVDLA-KLVFERLFL 175

Query: 566 ANASVWGALL 575
            ++  W A++
Sbjct: 176 KDSVSWVAMI 185


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 310/770 (40%), Positives = 470/770 (61%)

Query: 2    LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            LKAC+   DL  G QVH   +  G  SD FV ++LV +YAKCG  + + R+F  +P+++ 
Sbjct: 236  LKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNA 295

Query: 62   VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            VSWN+L + +      E+ +  F  M  S I  ++F+LS+++  CA SG+   G+ +H  
Sbjct: 296  VSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSL 355

Query: 122  SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +I++G + D F +  LVDMY+K G   DA+ VF  IE PD+VSW+A+I        +  A
Sbjct: 356  AIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREA 415

Query: 182  LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             ++F++M+ S + PN FT  S + A   +     G  +H  + K   + D  V   LV M
Sbjct: 416  AEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTM 475

Query: 242  YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
            Y K GS+ +   +F     ++LI+WN ++SG   N        +F  M  EG   +  T 
Sbjct: 476  YMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTF 535

Query: 302  STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             ++L+S +S   + + KQVHA  VK + + +D++  +L+D Y K   +EDA  IF     
Sbjct: 536  ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK 595

Query: 362  VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             DL A T ++  YAQ G GE+A+K +++MQ   + P+ F  +S L+ C+ ++  + G+Q+
Sbjct: 596  RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 655

Query: 422  HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
            H   IK G   D F  ++LV+MYAKCG ++DA+  F  +  R  VSW+ +I G +QHG+G
Sbjct: 656  HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 715

Query: 482  KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
             +AL+ F  ML++G +P+ +T + VL AC+H GL+ E K HF S+ K +GI P  EHYAC
Sbjct: 716  GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYAC 775

Query: 542  MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
            M+DILGRAGKF E    ++ M   +N  +W  +LGA +++ N+E G+ AA  LF +EPE 
Sbjct: 776  MVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEI 835

Query: 602  SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
             S ++LLSN++A+ GMWD+V  VR  M    +KKEPG SW+EV  +V+ F   D SH + 
Sbjct: 836  DSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKI 895

Query: 662  KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            +EI+ KL ++   L   GY P  +  LH+V + EK++LL++HSE+LA+AF L++T    T
Sbjct: 896  REIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKT 955

Query: 722  IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IR+ KNLRIC DCH   + IS+I ++E++VRD+N FHHF+NGSCSC  +W
Sbjct: 956  IRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 184/575 (32%), Positives = 317/575 (55%), Gaps = 2/575 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C SK DL  G  +HG V+ +G + D  + NSLV +YAKCG+   + ++F  IPER 
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW +L + +V   +   AV  F EM   G+  NEF+ ++ + AC+   D   G+++H 
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK+G  SD+F  +ALVD+YAK G +  A  VF  +   + VSWNA++ G       + 
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L LF +M  SEIN + FT ++ LK CA       G+ +H   I++  + D  +   LVD
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG   +A  +F  + + ++++W+ +I+   Q G   EAA +F  M   GV  +Q T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++++ +      +   + +HA   K  FE D+ + N+L+  Y K G V+D  ++F+ ++
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  ++++ +      +  L+++ +M     NP+ +   S+L +C++LS  + GKQ
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH  I+K     + F G +LV+MYAK   ++DA+  F+ +  R + +W+ ++ G AQ G+
Sbjct: 554 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 613

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++A++ F QM  +GV PN  TL S L  C+    + ++     SM  K G        +
Sbjct: 614 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL-DSGRQLHSMAIKAGQSGDMFVAS 672

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++D+  + G  ++A  + D +  +   S W  ++
Sbjct: 673 ALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTII 706



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 164/515 (31%), Positives = 287/515 (55%), Gaps = 8/515 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C +  +L  G  VH + +  G + DEF++  LV MY+KCG   D+ ++F  I +  
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD 395

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW+++ +C        EA   FK M  SG+ PN+F+L+S+++A    GD   G  IH 
Sbjct: 396 VVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHA 455

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G++ D    NALV MY K+G+++D   VF+   + D++SWNA+++G   +E  D 
Sbjct: 456 CVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDT 515

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L++F QM +   NPNM+T+ S L++C+ +   +LG+Q+H  ++K  +  +  VG  LVD
Sbjct: 516 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 575

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +++A  IF+ + +++L AW ++++G+ Q+G   +A   F  M REGV  ++ T
Sbjct: 576 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 635

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++ L   +    +   +Q+H++++K     D ++ ++L+D Y KCG VEDA  +F    
Sbjct: 636 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 695

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D V+  ++I  Y+Q G G +ALK +  M D    PD      +L+AC+++   E+GK+
Sbjct: 696 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 755

Query: 421 VHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               + K   ++ T    + +V++  + G   + +    E+     ++ W  ++G    H
Sbjct: 756 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMH 815

Query: 479 GR----GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           G      + A+++F   LE  +  N+I L ++  A
Sbjct: 816 GNIEFGERAAMKLF--ELEPEIDSNYILLSNMFAA 848



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/412 (36%), Positives = 232/412 (56%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           S M+  CA  GD   G+ IHG  IK G + D    N+LV++YAK G+   A  VF +I  
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VSW A+I G V   +   A+ LF +M+   +  N FTY +ALKAC+     E G+Q+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H   IK+   SD  VG  LVD+YAKCG M  A  +F  MP++N ++WN +++G  Q G  
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            +  +LF  M    + F + TLSTVLK  A+   +   + VH+L+++   E D++I   L
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG   DA+K+F      D+V+ +++IT   Q G   EA +++  M+   + P+ 
Sbjct: 372 VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQ 431

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F  +SL++A  +L     G+ +H  + K+GF  D    N+LV MY K GS+ D  R F  
Sbjct: 432 FTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEA 491

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
             +R ++SW+A++ G   +      L++F QML +G  PN  T +S+L +C+
Sbjct: 492 TTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 173/315 (54%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y+  L+ CA       G+ +H  +IK  I  D  +   LV++YAKCGS + A  +F  +P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+++++W  +I+G +  G    A +LF  M REGV  ++ T +T LK+ +    +   KQ
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VHA ++K    SD ++ ++L+D Y KCG +  A ++F      + V+  +++  +AQ G 
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            E+ L L+  M   EIN   F  S++L  CAN      G+ VH   I+ G   D F    
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           LV+MY+KCG   DA + F  I D  +VSWSA+I  L Q G+ +EA ++F +M   GV+PN
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 500 HITLVSVLCACNHAG 514
             TL S++ A    G
Sbjct: 431 QFTLASLVSAATDLG 445


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 320/775 (41%), Positives = 476/775 (61%), Gaps = 10/775 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C    +  +G QVH   V  G      V NSLV MY K GN  D RR+FD + +R 
Sbjct: 108 VLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD 167

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL + Y    F ++    F  M + G RP+ +++S++I A A  G   +G +IH 
Sbjct: 168 VVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +KLG++++    N+L+ M +K G L DA  VF ++E+ D VSWN++IAG V++  +  
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGL 238
           A + F  M+ +   P   T+ S +K+CA   LKELG  R LHC  +K  + ++  V   L
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSCAS--LKELGLVRVLHCKTLKSGLSTNQNVLTAL 345

Query: 239 VDMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           +    KC  +D+A  +F LM   +++++W  +ISG+LQNG   +A +LF  M REGV  +
Sbjct: 346 MVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPN 405

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T ST+L    + Q      ++HA  +KT +E    +  +L+DA+ K G++ DAVK+F+
Sbjct: 406 HFTYSTIL----TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFE 461

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYE 416
                D++A ++M+  YAQ G  EEA K++ ++    I P+ F   S++NAC A  ++ E
Sbjct: 462 LIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVE 521

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QGKQ H + IK    +     +SLV +YAK G+I+ A   F    +R +VSW++MI G A
Sbjct: 522 QGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYA 581

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           QHG+ K+AL++F +M +  +  + IT + V+ AC HAGLV + +++F  M     I P  
Sbjct: 582 QHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTM 641

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHY+CMID+  RAG   +AM++++ MPF   A+VW  +L A+R+++N+E+G+ AAE + +
Sbjct: 642 EHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIIS 701

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP+ S+ +VLLSNIYA+AG W     VR+ M   ++KKEPG SWIEVK+K Y+F  GD 
Sbjct: 702 LEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDL 761

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  S  IY+KL E++  L   GY P      HD+E+ +KE +L HHSE+LA+AFGLIAT
Sbjct: 762 SHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIAT 821

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            P   +++ KNLR+C DCH+  + +S +  R I+VRD NRFHHF+ G CSCG YW
Sbjct: 822 LPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 273/511 (53%), Gaps = 5/511 (0%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           +++LFD  P R +   N L   Y  CD  +EA+  F  +  SG+ P+ +++S +++ CAG
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
           S +  +G ++H   +K G    +   N+LVDMY K GN+ D   VF ++   D+VSWN++
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           + G   +  ND   +LF  M+     P+ +T ++ + A A      +G Q+H  ++K+  
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
           +++ +V   L+ M +K G + +AR++F  M  K+ ++WN +I+GH+ NG D+EA   F  
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M   G      T ++V+KS AS + +G+ + +H  ++K+   ++  ++ +L+ A  KC  
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354

Query: 349 VEDAVKIFKESSAVD-LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
           ++DA  +F     V  +V+ T+MI+ Y Q G  ++A+ L+  M+   + P+ F  S++L 
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT 414

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
               +   E    +H  +IK  +   +  G +L++ + K G+I DA + F  I  + +++
Sbjct: 415 VQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIA 470

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           WSAM+ G AQ G  +EA ++F Q+  +G+ PN  T  S++ AC       E    F +  
Sbjct: 471 WSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYA 530

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
            K  +       + ++ +  + G  + A E+
Sbjct: 531 IKLRLNNALCVSSSLVTLYAKRGNIESAHEI 561


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 314/777 (40%), Positives = 484/777 (62%), Gaps = 7/777 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PERS 60
           LK C   +   +G  VH  +  +    D    NSL+ +Y+KCG +  +  +F  +   R 
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRD 132

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ SC+ + +    A+  F +M+ +G  PNE+  ++   AC+ +    +G  I G
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 121 YSIKLGY-DSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           + +K GY  SD+     L+DM+ K  G+L  A  VF+ +   + V+W  +I   +   + 
Sbjct: 193 FVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF +M  S   P+ FT +  + ACA MEL  LG+QLH   I+  +  D  VG  L
Sbjct: 253 GEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCL 312

Query: 239 VDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYREGV 294
           ++MYAKC   GSM  AR IF  + + N+ +W  +I+G++Q GG D EA  LF  M    V
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHV 372

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             +  T S+ LK+ A+  A+ + +QV   +VK  F S + + NSLI  Y + G ++DA K
Sbjct: 373 IPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            F      +L++  ++I AYA+    EEAL+L+ E++D+ +   +F  +SLL+  A++  
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
             +G+Q+H  +IK G   +    N+L++MY++CG+I+ A + F ++ DR ++SW+++I G
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITG 552

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A+HG   +AL++F +MLE+GV PN +T ++VL AC+H GLV E   HF+SM  + G+ P
Sbjct: 553 FAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIP 612

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHYACM+DILGR+G   EA++ +++MP++A+A VW   LGA R++ N+E+G+HAA+M+
Sbjct: 613 RMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMI 672

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
              EP   + ++LLSN+YAS   WD V+ +R+ MK+  L KE G SW+EV++KV+ F VG
Sbjct: 673 IEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVG 732

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH ++ EIY +L  +S  + K GYVP ++  LHDVEE +KE+LL+ HSEK+AVAFGLI
Sbjct: 733 DTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLI 792

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T     IRV KNLRIC DCH++ ++IS    REIIVRD NRFHH ++G CSC  YW
Sbjct: 793 STSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 260/506 (51%), Gaps = 9/506 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L +A+   + MV  G  P+  + S  +  C  +    +G  +H    +     D  + N+
Sbjct: 47  LHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNS 106

Query: 137 LVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           L+ +Y+K G  E A ++F+ +    D++SW+A+++    +     AL  F  M  +   P
Sbjct: 107 LISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKC-GSMDEARM 253
           N + + +A +AC+  E   +G  +   ++K   ++SD  VG GL+DM+ K  G +  A  
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFK 226

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  MPE+N + W ++I+  +Q G   EA  LF  M   G   D+ TLS V+ + A+ + 
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMEL 286

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVACTSM 370
           + + +Q+H+ +++     D  +   LI+ Y KC   G +  A KIF +    ++ + T+M
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346

Query: 371 ITAYAQF-GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           IT Y Q  G  EEAL L+  M    + P+ F  SS L ACANL+A   G+QV  H +K G
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F S     NSL++MYA+ G IDDA +AF  + ++ ++S++ +I   A++   +EAL++F 
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           ++ + G+  +  T  S+L      G + + +    +   K G++  Q     +I +  R 
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGE-QIHARVIKSGLKLNQSVCNALISMYSRC 525

Query: 550 GKFQEAMELVDTMPFQANASVWGALL 575
           G  + A ++ + M    N   W +++
Sbjct: 526 GNIESAFQVFEDME-DRNVISWTSII 550



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 214/417 (51%), Gaps = 11/417 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC---GNFIDSRRLFDAIP 57
           V+ AC + + L LG Q+H   +  G   D  V   L+ MYAKC   G+   +R++FD I 
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336

Query: 58  ERSVVSWNSLFSCYVH-CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           + +V SW ++ + YV    + EEA+  F+ M+L+ + PN F+ SS + ACA      +G 
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++  +++KLG+ S    AN+L+ MYA+ G ++DA   F  +   +++S+N VI     + 
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           +++ AL+LF +++   +  + FT+ S L   A +     G Q+H  +IK  +K +  V  
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+ MY++CG+++ A  +F  M ++N+I+W  +I+G  ++G   +A  LF  M  EGV  
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576

Query: 297 DQTTLSTVLKSVASFQAIGV-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           +  T   VL + +    +    K   ++  +            ++D  G+ G + +A++ 
Sbjct: 577 NLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQF 636

Query: 356 FKE-SSAVDLVACTSMITA---YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
                   D +   + + A   +    LG+ A K+ +E +  +  P +++  S L A
Sbjct: 637 INSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHD--PAAYILLSNLYA 691



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 219/455 (48%), Gaps = 17/455 (3%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDW----ALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           ++ P   + N  + G ++ E N+     A+   + M     +P++ TY+  LK C     
Sbjct: 23  LQFPTFTNPNP-LTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRS 81

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM-PEKNLIAWNIVIS 271
            ++G  +H  L + +++ D +    L+ +Y+KCG  ++A  IF LM   ++LI+W+ ++S
Sbjct: 82  FDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVS 141

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
               N     A   F  M   G   ++   +   ++ ++ + + V   +    VKT +  
Sbjct: 142 CFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQ 201

Query: 332 DDYIVN-SLIDAYGKC-GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            D  V   LID + K  G +  A K+F++    + V  T MIT   QFG   EA+ L+LE
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLE 261

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-- 447
           M      PD F  S +++ACAN+     G+Q+H   I+ G   D   G  L+NMYAKC  
Sbjct: 262 MILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321

Query: 448 -GSIDDADRAFSEIPDRGIVSWSAMIGGLAQH-GRGKEALQMFGQMLEDGVLPNHITLVS 505
            GS+  A + F +I D  + SW+AMI G  Q  G  +EAL +F  M+   V+PNH T  S
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
            L AC +   +   +  F +   K G   +      +I +  R+G+  +A +  D + F+
Sbjct: 382 TLKACANLAALRIGEQVF-THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FE 439

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            N   +  ++ A    KN+   + A E+   IE +
Sbjct: 440 KNLISYNTVIDAYA--KNLN-SEEALELFNEIEDQ 471


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 310/720 (43%), Positives = 475/720 (65%), Gaps = 6/720 (0%)

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           +R +VSW++L SCY + +   EA+  F +M+  G  PNE+  + +  AC+   +  LG+ 
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 118 IHGYSIKLGY-DSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           I G+ +K GY +SD+    AL+DM+ K  G+LE A  VF  +   ++V+W  +I      
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             +  A+ LF  M  S   P+ FT +  + ACA M L  LGRQ HC ++K  +  D  VG
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 236 VGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYR 291
             LVDMYAKC   GS+D+AR +F  MP  N+++W  +I+G++Q+GG D EA  LF  M +
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
             V  +  T S+VLK+ A+   I + +QV+AL VK    S + + NSLI  Y +CG++E+
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A K F      +LV+  +++ AYA+    EEA +L+ E++      ++F  +SLL+  ++
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           + A  +G+Q+H  I+K GF S+    N+L++MY++CG+I+ A + F+E+ D  ++SW++M
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G A+HG    AL+ F +MLE GV PN +T ++VL AC+H GL++E   HF+SM+ + G
Sbjct: 424 ITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHG 483

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P  EHYAC++D+LGR+G  +EAMELV++MPF+A+A V    LGA R++ N+++G+HAA
Sbjct: 484 IVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAA 543

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           EM+   +P   + ++LLSN++ASAG W+ VA++R+ MK+  L KE G SWIEV++KV+ F
Sbjct: 544 EMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKF 603

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
            VGD SH +++EIY +LD+++  + + GY+P  +  LHDVEE +KEQ L+ HSEK+AVA+
Sbjct: 604 YVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAY 663

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G I+T     IRV KNLR+C DCHT+F++ S +  +EI++RD NRFHHF++G+CSC  YW
Sbjct: 664 GFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 288/498 (57%), Gaps = 11/498 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKC-GNFIDSRRLFDAIPE 58
           V +AC++K+++ LG  + G ++ TG F+SD  V  +L+ M+ K  G+   + ++FD +P+
Sbjct: 48  VFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD 107

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+VV+W  + + +    F  +AV  F +MVLSG  P+ F+LS +++ACA  G   LGR+ 
Sbjct: 108 RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKV---GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           H   +K G D D+    +LVDMYAK    G+++DA  VF  +   +++SW A+I G V  
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQS 227

Query: 176 EHNDW-ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
              D  A++LF +M   ++ PN FT++S LKACA +    LG Q++  ++KM + S   V
Sbjct: 228 GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV 287

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  L+ MY++CG+M+ AR  F ++ EKNL+++N +++ + ++    EA  LF  +   G 
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGT 347

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
           G +  T +++L   +S  AIG  +Q+H+  +K+ F+S+ +I N+LI  Y +CG++E A +
Sbjct: 348 GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQ 407

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E    ++++ TSMIT +A+ G    AL+ + +M +  ++P+     ++L+AC+++  
Sbjct: 408 VFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGL 467

Query: 415 YEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMI 472
             +G K      ++ G +        +V++  + G +++A    + +P +   +     +
Sbjct: 468 ISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFL 527

Query: 473 GGLAQHGR---GKEALQM 487
           G    HG    GK A +M
Sbjct: 528 GACRVHGNMDLGKHAAEM 545



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 224/457 (49%), Gaps = 39/457 (8%)

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           +G   D+ S +AL+  YA      +A++ F D                            
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFD---------------------------- 32

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYA 243
              M      PN + +T   +AC+  E   LG+ +   L+K    +SD  VG  L+DM+ 
Sbjct: 33  ---MLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFV 89

Query: 244 KC-GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           K  G ++ A  +F  MP++N++ W ++I+   Q G   +A  LF  M   G   D+ TLS
Sbjct: 90  KGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLS 149

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKES 359
            V+ + A    + + +Q H L +K+  + D  +  SL+D Y KC   G V+DA K+F   
Sbjct: 150 GVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRM 209

Query: 360 SAVDLVACTSMITAYAQF-GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
              ++++ T++IT Y Q  G   EA++L+LEM   ++ P+ F  SS+L ACANLS    G
Sbjct: 210 PVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLG 269

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +QV+  ++K    S    GNSL++MY++CG++++A +AF  + ++ +VS++ ++   A+ 
Sbjct: 270 EQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKS 329

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
              +EA ++F ++   G   N  T  S+L   +  G + + +    S   K G +     
Sbjct: 330 LNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGE-QIHSRILKSGFKSNLHI 388

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              +I +  R G  + A ++ + M    N   W +++
Sbjct: 389 CNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMI 424


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 323/774 (41%), Positives = 472/774 (60%), Gaps = 7/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLKAC S  D  LG Q+H + V  G D  E  A  SLV MY KCG+  +   +F+ +P++
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W SL +   H     E +  F  M   GI PN F+ +S+++A A  G   LG+++H
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             S+K G  S +F  N+L++MYAK G +EDA +VF  +E  D+VSWN ++AG  L+E   
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF + +++       TY + +K CA ++   L RQLH  ++K        V   L 
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D Y+KCG + +A  IF +    +N+++W  +ISG +QNG    A  LF  M  + V  ++
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T S +LK+  S     +  Q+HA  +KT ++   ++  +L+ +Y K G  EDA+ IFK 
Sbjct: 405 FTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKM 460

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQ 417
               D+VA ++M++ +AQ G  E A  L+ +M  + I P+ F  SS+++ACA  SA  +Q
Sbjct: 461 IEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ 520

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q H   IK+ +       ++LV+MY++ G+ID A   F    DR +VSW++MI G AQ
Sbjct: 521 GRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ 580

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG   +A++ F QM   G+  + +T ++V+  C H GLV E + +F+SM +   I P  E
Sbjct: 581 HGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTME 640

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HYACM+D+  RAGK  E M L+  MPF A A VW  LLGA R++KNVE+G+ +A+ L ++
Sbjct: 641 HYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSL 700

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP  SST+VLLSNIYA+AG W    +VR+ M   K+KKE G SWI++K+KV++F   D+S
Sbjct: 701 EPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKS 760

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H  S +IY KL  +   L + GY P     LHD+ E +KE +L  HSE+LA+AFGLIATP
Sbjct: 761 HPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATP 820

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PG  +++ KNLR+C DCH   + +S I  REII+RD +RFHHF  G+CSCG +W
Sbjct: 821 PGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 263/487 (54%), Gaps = 9/487 (1%)

Query: 49  SRRLFDAIPER-SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           +R   D IP R + V  N +   Y     + E +  F      G+  +  +LS ++ AC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSA-NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN 166
              D +LG ++H   +K G+D    SA  +LVDMY K G++ + + VF+ +   ++V+W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +++ GC   + +   + LF +M++  I PN FT+ S L A A     +LG+++H   +K 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
             +S   V   L++MYAKCG +++A+ +F+ M  +++++WN +++G   N  ++EA  LF
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
                      Q+T +TV+K  A+ + + + +Q+H+  +K  F     ++ +L DAY KC
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC 350

Query: 347 GHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           G + DA+ IF  ++ + ++V+ T++I+   Q G    A+ L+  M++  + P+ F  S++
Sbjct: 351 GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L A  ++       Q+H  +IK  +    F G +L+  Y+K GS +DA   F  I  + +
Sbjct: 411 LKASLSILP----PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDV 466

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHF 523
           V+WSAM+   AQ G  + A  +F +M   G+ PN  T+ SV+  CAC  AG+    + H 
Sbjct: 467 VAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA 526

Query: 524 ESMEKKF 530
            S++ ++
Sbjct: 527 ISIKYRY 533


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 476/771 (61%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC   + L +G Q+HG+V+  GF SD +V N+LV +Y   GN I +  +F  + +R 
Sbjct: 294  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             V++N+L +    C + E+A+  FK M L G+ P+  +L+S++ AC+  G    G+++H 
Sbjct: 354  AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            Y+ KLG+ S+     AL+++YAK  ++E A+  F + E  ++V WN ++    L +    
Sbjct: 414  YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + ++F+QM+  EI PN +TY S LK C  +   ELG Q+H  +IK   + +  V   L+D
Sbjct: 474  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAK G +D A  I      K++++W  +I+G+ Q   D +A + F  M   G+  D+  
Sbjct: 534  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            L+  + + A  QA+   +Q+HA +  + F SD    N+L+  Y +CG +E++   F+++ 
Sbjct: 594  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            A D +A  ++++ + Q G  EEAL++++ M    I+ ++F   S + A +  +  +QGKQ
Sbjct: 654  AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            VH  I K G+ S+T   N+L++MYAKCGSI DA++ F E+  +  VSW+A+I   ++HG 
Sbjct: 714  VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G EAL  F QM+   V PNH+TLV VL AC+H GLV +   +FESM  ++G+ P  EHY 
Sbjct: 774  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+L RAG    A E +  MP + +A VW  LL A  ++KN+E+G+ AA  L  +EPE
Sbjct: 834  CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             S+T+VLLSN+YA +  WD     R+ MK+  +KKEPG SWIEVK+ +++F VGD++H  
Sbjct: 894  DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + EI+    +++   ++ GYV    + L++++  +K+ +++ HSEKLA++FGL++ P   
Sbjct: 954  ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I V KNLR+C DCH   +F+SK+ +REIIVRD  RFHHF  G+CSC  YW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 283/575 (49%), Gaps = 7/575 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  ++  G DS+  ++  L   Y   G+   + ++FD +PER++ +WN +      
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMF 132
            + + E    F  MV   + PNE + S ++ AC G   +  +  +IH   +  G      
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N L+D+Y++ G ++ A  VF  +   D  SW A+I+G   +E    A++LF  M    
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I P  + ++S L AC  +E  E+G QLH  ++K+   SD  V   LV +Y   G++  A 
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  M +++ + +N +I+G  Q G   +A  LF  M+ +G+  D  TL++++ + ++  
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   +Q+HA + K  F S++ I  +L++ Y KC  +E A+  F E+   ++V    M+ 
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AY        + +++ +MQ  EI P+ +   S+L  C  L   E G+Q+H  IIK  F  
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           + +  + L++MYAK G +D A         + +VSW+ MI G  Q+    +AL  F QML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ-PMQEHYACMIDILGRAG 550
           + G+  + + L + + AC     + E +  H ++    F    P Q     ++ +  R G
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCG 640

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           K +E+    +      N + W AL+   +   N E
Sbjct: 641 KIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 674



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 237/474 (50%), Gaps = 9/474 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           GIRPN  +L  ++  C  +  SL  GRK+H   +KLG DS+   +  L D Y   G+L  
Sbjct: 79  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF ++    I +WN +I              LF +M S  + PN  T++  L+AC G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198

Query: 210 MELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
             +  ++  Q+H  ++   ++   +V   L+D+Y++ G +D AR +F  +  K+  +W  
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG  +N  + EA  LF  MY  G+       S+VL +    +++ + +Q+H L +K  
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F SD Y+ N+L+  Y   G++  A  IF   S  D V   ++I   +Q G GE+A++L+ 
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M    + PDS   +SL+ AC+      +G+Q+H +  K GF S+     +L+N+YAKC 
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            I+ A   F E     +V W+ M+         + + ++F QM  + ++PN  T  S+L 
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498

Query: 509 ACNHAG-LVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELV 559
            C   G L    + H + ++  F +      Y C  +ID+  + GK   A +++
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 548



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 390 MQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +++R I P+      LL  C   + + ++G+++H  I+K G  S+      L + Y   G
Sbjct: 75  VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +  A + F E+P+R I +W+ MI  LA      E   +F +M+ + V PN  T   VL 
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC    +  +      +     G++        +ID+  R G    A  + D +  + ++
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254

Query: 569 SVWGALL 575
           S W A++
Sbjct: 255 S-WVAMI 260


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 476/771 (61%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC   + L +G Q+HG+V+  GF SD +V N+LV +Y   GN I +  +F  + +R 
Sbjct: 254  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             V++N+L +    C + E+A+  FK M L G+ P+  +L+S++ AC+  G    G+++H 
Sbjct: 314  AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            Y+ KLG+ S+     AL+++YAK  ++E A+  F + E  ++V WN ++    L +    
Sbjct: 374  YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + ++F+QM+  EI PN +TY S LK C  +   ELG Q+H  +IK   + +  V   L+D
Sbjct: 434  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 493

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAK G +D A  I      K++++W  +I+G+ Q   D +A + F  M   G+  D+  
Sbjct: 494  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            L+  + + A  QA+   +Q+HA +  + F SD    N+L+  Y +CG +E++   F+++ 
Sbjct: 554  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 613

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            A D +A  ++++ + Q G  EEAL++++ M    I+ ++F   S + A +  +  +QGKQ
Sbjct: 614  AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 673

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            VH  I K G+ S+T   N+L++MYAKCGSI DA++ F E+  +  VSW+A+I   ++HG 
Sbjct: 674  VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 733

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G EAL  F QM+   V PNH+TLV VL AC+H GLV +   +FESM  ++G+ P  EHY 
Sbjct: 734  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 793

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+L RAG    A E +  MP + +A VW  LL A  ++KN+E+G+ AA  L  +EPE
Sbjct: 794  CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 853

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             S+T+VLLSN+YA +  WD     R+ MK+  +KKEPG SWIEVK+ +++F VGD++H  
Sbjct: 854  DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 913

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + EI+    +++   ++ GYV    + L++++  +K+ +++ HSEKLA++FGL++ P   
Sbjct: 914  ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 973

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I V KNLR+C DCH   +F+SK+ +REIIVRD  RFHHF  G+CSC  YW
Sbjct: 974  PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 283/575 (49%), Gaps = 7/575 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  ++  G DS+  ++  L   Y   G+   + ++FD +PER++ +WN +      
Sbjct: 64  GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 123

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMF 132
            + + E    F  MV   + PNE + S ++ AC G   +  +  +IH   +  G      
Sbjct: 124 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 183

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N L+D+Y++ G ++ A  VF  +   D  SW A+I+G   +E    A++LF  M    
Sbjct: 184 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 243

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I P  + ++S L AC  +E  E+G QLH  ++K+   SD  V   LV +Y   G++  A 
Sbjct: 244 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 303

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  M +++ + +N +I+G  Q G   +A  LF  M+ +G+  D  TL++++ + ++  
Sbjct: 304 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 363

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   +Q+HA + K  F S++ I  +L++ Y KC  +E A+  F E+   ++V    M+ 
Sbjct: 364 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AY        + +++ +MQ  EI P+ +   S+L  C  L   E G+Q+H  IIK  F  
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           + +  + L++MYAK G +D A         + +VSW+ MI G  Q+    +AL  F QML
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ-PMQEHYACMIDILGRAG 550
           + G+  + + L + + AC     + E +  H ++    F    P Q     ++ +  R G
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCG 600

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           K +E+    +      N + W AL+   +   N E
Sbjct: 601 KIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 634



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 237/474 (50%), Gaps = 9/474 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           GIRPN  +L  ++  C  +  SL  GRK+H   +KLG DS+   +  L D Y   G+L  
Sbjct: 39  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF ++    I +WN +I              LF +M S  + PN  T++  L+AC G
Sbjct: 99  AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158

Query: 210 MELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
             +  ++  Q+H  ++   ++   +V   L+D+Y++ G +D AR +F  +  K+  +W  
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG  +N  + EA  LF  MY  G+       S+VL +    +++ + +Q+H L +K  
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F SD Y+ N+L+  Y   G++  A  IF   S  D V   ++I   +Q G GE+A++L+ 
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 338

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M    + PDS   +SL+ AC+      +G+Q+H +  K GF S+     +L+N+YAKC 
Sbjct: 339 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 398

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            I+ A   F E     +V W+ M+         + + ++F QM  + ++PN  T  S+L 
Sbjct: 399 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 458

Query: 509 ACNHAG-LVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELV 559
            C   G L    + H + ++  F +      Y C  +ID+  + GK   A +++
Sbjct: 459 TCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 508



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 390 MQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +++R I P+      LL  C   + + ++G+++H  I+K G  S+      L + Y   G
Sbjct: 35  VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 94

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +  A + F E+P+R I +W+ MI  LA      E   +F +M+ + V PN  T   VL 
Sbjct: 95  DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 154

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC    +  +      +     G++        +ID+  R G    A  + D +  + ++
Sbjct: 155 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 214

Query: 569 SVWGALL 575
           S W A++
Sbjct: 215 S-WVAMI 220


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 314/777 (40%), Positives = 483/777 (62%), Gaps = 7/777 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PERS 60
           LK C   +   +G  VH  +  +    D    NSL+ +Y+KCG +  +  +F  +   R 
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRD 132

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ SC+ + +    A+  F +M+ +G  PNE+  ++   AC+ +    +G  I G
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 121 YSIKLGY-DSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           + IK GY  SD+     L+DM+ K  G+L  A  VF+ +   + V+W  +I   +   + 
Sbjct: 193 FVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF  M  S   P+ FT +  + ACA MEL  LG+QLH   I+  +  D  VG  L
Sbjct: 253 GEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCL 312

Query: 239 VDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYREGV 294
           ++MYAKC   GSM  AR IF  + + N+ +W  +I+G++Q GG D EA  LF  M    V
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHV 372

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             +  T S+ LK+ A+  A+ + +QV   +VK  F S + + NSLI  Y + G ++DA K
Sbjct: 373 IPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            F      +L++  ++I AYA+    EEAL+L+ E++D+ +   +F  +SLL+  A++  
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
             +G+Q+H  +IK G   +    N+L++MY++CG+I+ A + F ++ DR ++SW+++I G
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITG 552

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A+HG   +AL++F +MLE+GV PN +T ++VL AC+H GLV E   HF+SM  + G+ P
Sbjct: 553 FAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIP 612

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHYAC++DILGR+G   EA++ +++MP++A+A VW   LGA R++ N+E+G+HAA+M+
Sbjct: 613 RMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMI 672

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
              EP   + ++LLSN+YAS   WD V+ +R+ MK+  L KE G SW+EV++KV+ F VG
Sbjct: 673 IEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVG 732

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH ++ EIY +L  +S  + K GYVP ++  LHDVEE +KE+LL+ HSEK+AVAFGLI
Sbjct: 733 DTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLI 792

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T     IRV KNLRIC DCH++ ++IS    REIIVRD NRFHH ++G CSC  YW
Sbjct: 793 STSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 260/506 (51%), Gaps = 9/506 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L +A+   + MV  G  P+  + S  +  C  +    +G  +H    +     D  + N+
Sbjct: 47  LHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNS 106

Query: 137 LVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           L+ +Y+K G  E A ++F+ +    D++SW+A+++    +     AL  F  M  +   P
Sbjct: 107 LISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKC-GSMDEARM 253
           N + + +A +AC+  E   +G  +   +IK   ++SD  VG GL+DM+ K  G +  A  
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFK 226

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  MPE+N + W ++I+  +Q G   EA  LF  M   G   D+ TLS V+ + A+ + 
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMEL 286

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVACTSM 370
           + + +Q+H+ +++     D  +   LI+ Y KC   G +  A KIF +    ++ + T+M
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346

Query: 371 ITAYAQF-GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           IT Y Q  G  EEAL L+  M    + P+ F  SS L ACANL+A   G+QV  H +K G
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F S     NSL++MYA+ G IDDA +AF  + ++ ++S++ +I   A++   +EAL++F 
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           ++ + G+  +  T  S+L      G + + +    +   K G++  Q     +I +  R 
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGE-QIHARVIKSGLKLNQSVCNALISMYSRC 525

Query: 550 GKFQEAMELVDTMPFQANASVWGALL 575
           G  + A ++ + M    N   W +++
Sbjct: 526 GNIESAFQVFEDME-DRNVISWTSII 550



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 221/426 (51%), Gaps = 13/426 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC---GNFIDSRRLFDAIP 57
           V+ AC + + L LG Q+H   +  G   D  V   L+ MYAKC   G+   +R++FD I 
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336

Query: 58  ERSVVSWNSLFSCYVH-CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           + +V SW ++ + YV    + EEA+  F+ M+L+ + PN F+ SS + ACA      +G 
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++  +++KLG+ S    AN+L+ MYA+ G ++DA   F  +   +++S+N VI     + 
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           +++ AL+LF +++   +  + FT+ S L   A +     G Q+H  +IK  +K +  V  
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+ MY++CG+++ A  +F  M ++N+I+W  +I+G  ++G   +A  LF  M  EGV  
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576

Query: 297 DQTTLSTVLKSVASFQAIGV-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           ++ T   VL + +    +    K   ++  +            ++D  G+ G + +A++ 
Sbjct: 577 NEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQF 636

Query: 356 FKE-SSAVDLVACTSMITA---YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
                   D +   + + A   +    LG+ A K+ +E +  +  P +++   L N  A+
Sbjct: 637 INSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHD--PAAYIL--LSNLYAS 692

Query: 412 LSAYEQ 417
           +S +++
Sbjct: 693 ISKWDE 698



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 219/455 (48%), Gaps = 17/455 (3%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDW----ALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           ++ P   + N  + G ++ E N+     A+   + M     +P++ TY+  LK C     
Sbjct: 23  LQFPTFTNPNP-LTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRS 81

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM-PEKNLIAWNIVIS 271
            ++G  +H  L + +++ D +    L+ +Y+KCG  ++A  IF LM   ++LI+W+ ++S
Sbjct: 82  FDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVS 141

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
               N     A   F  M   G   ++   +   ++ ++ + + V   +    +KT +  
Sbjct: 142 CFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQ 201

Query: 332 DDYIVN-SLIDAYGKC-GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            D  V   LID + K  G +  A K+F++    + V  T MIT   QFG   EA+ L+L+
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLD 261

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-- 447
           M      PD F  S +++ACAN+     G+Q+H   I+ G   D   G  L+NMYAKC  
Sbjct: 262 MIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321

Query: 448 -GSIDDADRAFSEIPDRGIVSWSAMIGGLAQH-GRGKEALQMFGQMLEDGVLPNHITLVS 505
            GS+  A + F +I D  + SW+AMI G  Q  G  +EAL +F  M+   V+PNH T  S
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
            L AC +   +   +  F +   K G   +      +I +  R+G+  +A +  D + F+
Sbjct: 382 TLKACANLAALRIGEQVF-THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FE 439

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            N   +  ++ A    KN+   + A E+   IE +
Sbjct: 440 KNLISYNTVIDAYA--KNLN-SEEALELFNEIEDQ 471


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 323/774 (41%), Positives = 471/774 (60%), Gaps = 7/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLKAC S  D  LG Q+H + V  G D  E  A  SLV MY KCG+  +   +F+ +P++
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W SL +   H     E +  F  M   GI PN F+ +S+++A A  G   LG+++H
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             S+K G  S +F  N+L++MYAK G +EDA +VF  +E  D+VSWN ++AG  L+E   
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF + +++       TY + +K CA ++   L RQLH  ++K        V   L 
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D Y+KCG + +A  IF +    +N+++W  +ISG +QNG    A  LF  M  + V  ++
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T S +LK+  S     +  Q+HA  +KT ++    +  +L+ +Y K G  EDA+ IFK 
Sbjct: 405 FTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKM 460

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQ 417
               D+VA ++M++ +AQ G  E A  L+ +M  + I P+ F  SS+++ACA  SA  +Q
Sbjct: 461 IEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ 520

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q H   IK+ +       ++LV+MY++ G+ID A   F    DR +VSW++MI G AQ
Sbjct: 521 GRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ 580

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG   +A++ F QM   G+  + +T ++V+  C H GLV E + +F+SM +   I P  E
Sbjct: 581 HGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTME 640

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HYACM+D+  RAGK  E M L+  MPF A A VW  LLGA R++KNVE+G+ +A+ L ++
Sbjct: 641 HYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSL 700

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP  SST+VLLSNIYA+AG W    +VR+ M   K+KKE G SWI++K+KV++F   D+S
Sbjct: 701 EPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKS 760

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H  S +IY KL  +   L + GY P     LHD+ E +KE +L  HSE+LA+AFGLIATP
Sbjct: 761 HPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATP 820

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PG  +++ KNLR+C DCH   + +S I  REII+RD +RFHHF  G+CSCG +W
Sbjct: 821 PGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 262/487 (53%), Gaps = 9/487 (1%)

Query: 49  SRRLFDAIPER-SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           +R   D IP R + V  N +   Y     + E +  F      G+  +  +LS ++ AC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSA-NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN 166
              D +LG ++H   +K G+D    SA  +LVDMY K G++ + + VF+ +   ++V+W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +++ GC   + +   + LF +M++  I PN FT+ S L A A     +LG+++H   +K 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
             +S   V   L++MYAKCG +++A+ +F+ M  +++++WN +++G   N  ++EA  LF
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
                      Q+T +TV+K  A+ + + + +Q+H+  +K  F     ++ +L DAY KC
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC 350

Query: 347 GHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           G + DA+ IF  ++ + ++V+ T++I+   Q G    A+ L+  M++  + P+ F  S++
Sbjct: 351 GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L A  ++       Q+H  +IK  +      G +L+  Y+K GS +DA   F  I  + +
Sbjct: 411 LKASLSILP----PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDV 466

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHF 523
           V+WSAM+   AQ G  + A  +F +M   G+ PN  T+ SV+  CAC  AG+    + H 
Sbjct: 467 VAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA 526

Query: 524 ESMEKKF 530
            S++ ++
Sbjct: 527 ISIKYRY 533


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/695 (42%), Positives = 441/695 (63%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA+     M+L G R        ++  CA       GR++H   +K G   + +  N 
Sbjct: 77  LKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ MYAK G+L DA  VF  I   +IVSW A+I   V    N  A K ++ MK +   P+
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T+ S L A    EL ++G+++H  + K  ++ +P VG  LV MYAKCG + +A++IF 
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +PEKN++ W ++I+G+ Q G    A  L   M +  V  ++ T +++L+   +  A+  
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K+VH   +++ +  + ++VN+LI  Y KCG +++A K+F +    D+V  T+M+T YAQ
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  +EA+ L+  MQ + I PD    +S L +C++ +  ++GK +H  ++  G+  D + 
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYL 436

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            ++LV+MYAKCGS+DDA   F+++ +R +V+W+AMI G AQHGR +EAL+ F QM + G+
Sbjct: 437 QSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGI 496

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ +T  SVL AC H GLV E + HF SM   +GI+PM EHY+C +D+LGRAG  +EA 
Sbjct: 497 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 556

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
            ++ TMPFQ   SVWGALL A RI+ +VE G+ AAE +  ++P+    +V LSNIYA+AG
Sbjct: 557 NVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAG 616

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            +++  KVR+ M+   + KEPG SWIEV  KV+ F V D+SH  +KEIYA+L ++++ + 
Sbjct: 617 RYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIK 676

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + GYVP     LHDV+E +K Q L  HSE+LA+ +GL+ TPPG  IR+ KNLR+C DCHT
Sbjct: 677 EQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHT 736

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + +FISK+V REII RD +RFHHF +G CSCG +W
Sbjct: 737 ASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 158/536 (29%), Positives = 286/536 (53%), Gaps = 13/536 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   + L  G +VH  ++ +G   + ++ N+L+ MYAKCG+  D+RR+FD I +R+
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW ++   +V  +   EA   ++ M L+G +P++ +  S++NA        +G+K+H 
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G + +     +LV MYAK G++  A  +F  +   ++V+W  +IAG       D 
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L ++M+ +E+ PN  TYTS L+ C      E G+++H  +I+     +  V   L+ 
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG + EAR +F  +P ++++ W  +++G+ Q G   EA  LF  M ++G+  D+ T
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++ L S +S   +   K +H   V   +  D Y+ ++L+  Y KCG ++DA  +F + S
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-K 419
             ++VA T+MIT  AQ G   EAL+ + +M+ + I PD    +S+L+AC ++   E+G K
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                 + +G        +  V++  + G +++A+     +P   G   W A++     H
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581

Query: 479 G---RGKEALQMFGQM--LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
               RG+ A +   ++   +DG    ++ L ++  A   AG   +A+   + MEK+
Sbjct: 582 SDVERGERAAENVLKLDPDDDGA---YVALSNIYAA---AGRYEDAEKVRQVMEKR 631



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 11/280 (3%)

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGK 419
           VD +A +  ++   + G  +EAL +   M  Q   +  D F    LL  CA L + EQG+
Sbjct: 59  VDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVF--RGLLQECARLRSLEQGR 116

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH  I+K G   + +  N+L++MYAKCGS+ DA R F  I DR IVSW+AMI       
Sbjct: 117 EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGN 176

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCA-CNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           +  EA + +  M   G  P+ +T VS+L A  N   L    K H E  +    ++P    
Sbjct: 177 QNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG- 235

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
              ++ +  + G   +A  + D +P + N   W  L+        V+V     E +   E
Sbjct: 236 -TSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293

Query: 599 --PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
             P K +   +L        + ++  KV R++  +   +E
Sbjct: 294 VAPNKITYTSILQGCTTPLAL-EHGKKVHRYIIQSGYGRE 332


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/696 (41%), Positives = 444/696 (63%), Gaps = 1/696 (0%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA+     M+L G R        ++  CA       GR++H   +K G   + +  N 
Sbjct: 28  LKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 87

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ MYAK G+L DA  VF  I   +IVSW A+I   V    N  A K ++ MK +   P+
Sbjct: 88  LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T+ S L A    EL +LG+++H  +++  ++ +P VG  LV MYAKCG + +AR+IF 
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +PEKN++ W ++I+G+ Q G    A  L   M +  V  ++ T +++L+   +  A+  
Sbjct: 208 RLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH 267

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K+VH   +++ +  + ++VNSLI  Y KCG +E+A K+F +    D+V  T+M+T YAQ
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  +EA+ L+  MQ + I PD    +S+L +C++ +  ++GK++H  ++  G+  D + 
Sbjct: 328 LGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYL 387

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL-AQHGRGKEALQMFGQMLEDG 495
            ++LV+MYAKCGS+DDA   F+++ +R +V+W+A+I G  AQHGR +EAL+ F QM + G
Sbjct: 388 QSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQG 447

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           + P+ +T  SVL AC H GLV E + HF SM   +GI+PM EHY+C +D+LGRAG  +EA
Sbjct: 448 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 507

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
             ++ +MPF    SVWGALL A R++ +VE G+ AAE +  ++P+    +V LS+IYA+A
Sbjct: 508 ENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAA 567

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G +++  KVR+ M+   + KEPG SWIEV  KV+ F V D+SH  S++IY +L ++++ +
Sbjct: 568 GRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQI 627

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            + GYVP     LHDV+E +KE++L+ HSE+LA+ +GL+ TPPG  IR+ KNLR+C DCH
Sbjct: 628 KEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCH 687

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+ +FISK+V REII RD  RFHHF +G CSCG +W
Sbjct: 688 TATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 290/537 (54%), Gaps = 14/537 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   + L  G +VH  ++ +G   + ++ N+L+ MYAKCG+  D+RR+FD+I +R+
Sbjct: 53  LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW ++   +V  +   EA   ++ M L+G +P++ +  S++NA        LG+K+H 
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G + +     +LV MYAK G++  A  +F  +   ++V+W  +IAG       D 
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L + M+ +E+ PN  T+ S L+ C      E G+++H  +I+     +  V   L+ 
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG ++EAR +F  +P ++++ W  +++G+ Q G   EA +LF  M ++G+  D+ T
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++VL S +S   +   K++H   V   +  D Y+ ++L+  Y KCG ++DA  +F + S
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412

Query: 361 AVDLVACTSMITA-YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG- 418
             ++VA T++IT   AQ G   EAL+ + +M+ + I PD    +S+L+AC ++   E+G 
Sbjct: 413 ERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 472

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
           K      + +G        +  V++  + G +++A+     +P   G   W A++     
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRV 532

Query: 478 HG---RGKEALQMFGQM--LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           H    RG+ A +   ++   +DG    ++ L S+  A   AG   +A+   + MEK+
Sbjct: 533 HSDVERGERAAENVLKLDPDDDGA---YVALSSIYAA---AGRYEDAEKVRQVMEKR 583



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 132/280 (47%), Gaps = 11/280 (3%)

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGK 419
           V+ +A +  ++   + G  +EAL +   M  Q   +  D F    LL  CA L + EQG+
Sbjct: 10  VETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVF--RGLLQECARLRSLEQGR 67

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH  I+K G   + +  N+L++MYAKCGS+ DA R F  I DR IVSW+AMI       
Sbjct: 68  EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGN 127

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA-KHHFESMEKKFGIQPMQEH 538
           +  EA + +  M   G  P+ +T VS+L A  +  L+    K H E +E    ++P    
Sbjct: 128 KNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG- 186

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
              ++ +  + G   +A  + D +P + N   W  L+        V+V     E +   E
Sbjct: 187 -TSLVGMYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244

Query: 599 --PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
             P K +   +L      A + ++  KV R++  +   +E
Sbjct: 245 VAPNKITFASILQGCTTPAAL-EHGKKVHRYIIQSGYGRE 283


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 301/773 (38%), Positives = 480/773 (62%), Gaps = 3/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   +DLF G ++HG+ +  G DS  FV NSLV +YAKC +   +R+LFD +  R+
Sbjct: 64  LLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRN 123

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VVSWNS+ S Y       EA+C F EM+ +G+  N ++ ++ + AC  S    LG +IH
Sbjct: 124 DVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIH 183

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K G   D++ ANALV MY + G + +A  +F ++E  DIV+WN+++ G + +    
Sbjct: 184 AAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYS 243

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+ F  ++++++ P+  +  S + A   +     G+++H   IK    S+ +VG  L+
Sbjct: 244 EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLI 303

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKC  M      F LM  K+LI+W    +G+ QN   ++A  L   +  EG+  D T
Sbjct: 304 DMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDAT 363

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + ++L +      +G  K++H  +++    SD  + N++ID YG+CG ++ AV+IF+  
Sbjct: 364 MIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESI 422

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ TSMI+ Y   GL  +AL+++  M++  + PD     S+L+A  +LS  ++GK
Sbjct: 423 ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGK 482

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  II+ GF+ +    N+LV+MYA+CGS++DA + F+   +R ++ W+AMI     HG
Sbjct: 483 EIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHG 542

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+ A+++F +M ++ ++P+HIT +++L AC+H+GLV E K   E M+ ++ ++P  EHY
Sbjct: 543 YGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHY 602

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++D+LGR    +EA ++V +M  +    VW ALLGA RI+ N E+G+ AAE L  ++ 
Sbjct: 603 TCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDL 662

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +    +VL+SN++A+ G W +V +VR  MK + L K PG SWIEV +K++ F   D+ H 
Sbjct: 663 DNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHP 722

Query: 660 RSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
              +IY KL +V++ L +  GYV   +  LH+V E EK Q+LY HSE+LA+A+GL+AT  
Sbjct: 723 ECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAE 782

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  IRV KNLR+C DCH+    +S+   RE+IVRD +RFHHF++G CSCG +W
Sbjct: 783 GTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 171/565 (30%), Positives = 304/565 (53%), Gaps = 9/565 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY KCG+ +D+  +FD + ERS+ +WN++   YV       A+  ++EM   G+  + ++
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
              ++ AC    D   G +IHG +IK G DS +F  N+LV +YAK  ++  A  +F  + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 159 -HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              D+VSWN++I+    +     AL LF +M  + +  N +T+ +AL+AC      +LG 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+H +++K     D  V   LV MY + G M EA +IF  +  K+++ WN +++G +QNG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA   F  +    +  DQ ++ +++ +      +   K++HA ++K  F+S+  + N
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +LID Y KC  +    + F   +  DL++ T+    YAQ     +AL+L  ++Q   ++ 
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D+ +  S+L AC  L+   + K++H + I+ G +SD    N+++++Y +CG ID A R F
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIR-GGLSDPVLQNTIIDVYGECGIIDYAVRIF 419

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA-CNHAGLV 516
             I  + +VSW++MI     +G   +AL++F  M E G+ P+++TLVS+L A C+ + L 
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLK 479

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
              + H   + K F ++    +   ++D+  R G  ++A ++  T     N  +W A++ 
Sbjct: 480 KGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIF-TCTKNRNLILWTAMIS 536

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEK 601
           A   Y     G+ A E+   ++ EK
Sbjct: 537 A---YGMHGYGEAAVELFMRMKDEK 558


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 310/756 (41%), Positives = 459/756 (60%), Gaps = 3/756 (0%)

Query: 17   VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
            +HG V    F S   V+N L+ +Y+KCG+   +RR+FD + ++  VSW ++ + Y H   
Sbjct: 252  IHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 77   LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
              E +  F +M L  +R N+ S  S   A A + D   G++IHG +++   DSD+  A  
Sbjct: 310  FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 137  LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
            L+ MYAK G  E A  +F  ++  D+V+W+A+IA  V   + + AL LFQ+M++ ++ PN
Sbjct: 370  LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 197  MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
              T  S L ACA + L +LG+ +HC  +K ++ SD   G  LV MYAKCG    A   F+
Sbjct: 430  RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489

Query: 257  LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
             M  ++++ WN +I+G+ Q G    A  +F  +    +  D  T+  V+ + A    +  
Sbjct: 490  RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549

Query: 317  CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYA 375
               +H L VK  FESD ++ N+LID Y KCG +  A  +F ++    D V    +I AY 
Sbjct: 550  GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609

Query: 376  QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
            Q G  +EA+  + +M+    +P+S    S+L A A L+A+ +G   H  II+ GF+S+T 
Sbjct: 610  QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL 669

Query: 436  AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             GNSL++MYAKCG +D +++ F+E+  +  VSW+AM+ G A HG G  A+ +F  M E  
Sbjct: 670  VGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 729

Query: 496  VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            V  + ++ VSVL AC HAGLV E +  F SM  K+ I+P  EHYACM+D+LGRAG F E 
Sbjct: 730  VQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDET 789

Query: 556  MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            +  +  MP + +A VWGALLG+ R++ NV++G+ A + L  +EP   +  V+LS+IYA +
Sbjct: 790  LGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS 849

Query: 616  GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            G W +  K R  M D  LKK PG SW+E+K+KV+ F VGD+SH + + ++   + + + +
Sbjct: 850  GRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKM 909

Query: 676  NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
             K GYVP     L +VEE +KE  LY HSE+LA+ F L+ TPPG+TI++ KNLR+C DCH
Sbjct: 910  EKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCH 969

Query: 736  TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T+ +FISKI +R IIVRD  RFHHF +G CSC  YW
Sbjct: 970  TTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 187/585 (31%), Positives = 306/585 (52%), Gaps = 11/585 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT   +L  G+  HG +   G + D F+   LV MY+K G+   +R +FD +P+R 
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRD 194

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN++ +     +   EAV FF+ M L G+ P+  SL ++        +  L R IHG
Sbjct: 195 VVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHG 254

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +  + S +  +N L+D+Y+K G+++ A  VF  +   D VSW  ++AG   + HN  
Sbjct: 255 YVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG---YAHNGC 309

Query: 181 ---ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
               L+LF +MK   +  N  +  SA  A A     E G+++H   ++  I SD +V   
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MYAKCG  ++A+ +F  +  ++L+AW+ +I+  +Q G   EA SLF  M  + +  +
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + TL ++L + A    + + K +H  +VK   +SD     +L+  Y KCG    A+  F 
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             S+ D+V   S+I  YAQ G    A+ ++ +++   INPD+     ++ ACA L+  +Q
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           G  +H  I+K GF SD    N+L++MYAKCGS+  A+  F++    +  V+W+ +I    
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G  KEA+  F QM  +   PN +T VSVL A  +     E    F +   + G     
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFLSNT 668

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
                +ID+  + G+   + +L + M  +   S W A+L    ++
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVH 712



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/574 (29%), Positives = 289/574 (50%), Gaps = 8/574 (1%)

Query: 6   TSKKDLFLGLQVHGIVVFTGFDSDEFVAN--SLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           +S K L   LQ+H  ++ +GF     + +  +L  ++ KC     +R +FD+ P  S + 
Sbjct: 40  SSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARSVFDSTPNPSRIL 96

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           WNS+   Y       EA+  +  MV  G+ P++++ + ++ AC G+ +   G   HG   
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           + G + D+F    LVDMY+K+G+L+ A  VF  +   D+V+WNA+IAG    E    A+ 
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
            F+ M+   + P+  +  +       +   EL R +H  + + +  S   V  GL+D+Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYS 274

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
           KCG +D AR +F  M +++ ++W  +++G+  NG  +E   LF  M    V  ++ +  +
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
              + A    +   K++H  +++   +SD  +   L+  Y KCG  E A ++F      D
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           LVA +++I A  Q G  EEAL L+ EMQ++++ P+     S+L ACA+LS  + GK +H 
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
             +K    SD   G +LV+MYAKCG    A   F+ +  R IV+W+++I G AQ G    
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+ MF ++    + P+  T+V V+ AC     + +       +  K G +        +I
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALI 573

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           D+  + G    A  L +   F  +   W  ++ A
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/479 (32%), Positives = 254/479 (53%), Gaps = 9/479 (1%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           DL  G ++HG  +    DSD  VA  L+VMYAKCG    +++LF  +  R +V+W+++ +
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
             V   + EEA+  F+EM    ++PN  +L S++ ACA      LG+ IH +++K   DS
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D+ +  ALV MYAK G    A+  F  +   DIV+WN++I G         A+ +F +++
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR 523

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
            S INP+  T    + ACA +   + G  +H  ++K+  +SD  V   L+DMYAKCGS+ 
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583

Query: 250 EARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            A  +F+     K+ + WN++I+ ++QNG   EA S F  M  E    +  T  +VL + 
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A   A       HA  ++  F S+  + NSLID Y KCG ++ + K+F E    D V+  
Sbjct: 644 AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWN 703

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIK 427
           +M++ YA  G G+ A+ L+  MQ+ ++  DS    S+L+AC +    E+G+++ H    K
Sbjct: 704 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDK 763

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI----PDRGIVSWSAMIGGLAQHGRGK 482
           +    D      +V++  + G  D+    F ++    PD G+  W A++G    H   K
Sbjct: 764 YHIKPDLEHYACMVDLLGRAGLFDET-LGFIKVMPVEPDAGV--WGALLGSCRMHSNVK 819



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 232/492 (47%), Gaps = 13/492 (2%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   I  G+     S   L+++Y+     + A +VF    +P  + WN++I      +
Sbjct: 50  QIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + AL+++  M    + P+ +T+T  LKAC G    + G   H  + +  ++ D  +G 
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           GLVDMY+K G +  AR +F  MP+++++AWN +I+G  Q+    EA   F  M   GV  
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              +L  +   +     I +C+ +H    +  F S   + N LID Y KCG V+ A ++F
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVF 286

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +    D V+  +M+  YA  G   E L+L+ +M+   +  +     S   A A     E
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +GK++H   ++    SD      L+ MYAKCG  + A + F  +  R +V+WSA+I  L 
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q G  +EAL +F +M    + PN +TL+S+L AC    L+   K        K  +    
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK-SIHCFTVKADMDSDL 465

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF- 595
                ++ +  + G F  A+   + M  + +   W +L+     Y  +    +A +M + 
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLING---YAQIGDPYNAIDMFYK 521

Query: 596 ----AIEPEKSS 603
               AI P+  +
Sbjct: 522 LRLSAINPDAGT 533



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/467 (31%), Positives = 225/467 (48%), Gaps = 37/467 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L LG  +H   V    DSD     +LV MYAKCG F  +   F+ +  R 
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNSL + Y        A+  F ++ LS I P+  ++  ++ ACA   D   G  IHG
Sbjct: 496 IVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHG 555

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHEHND 179
             +KLG++SD    NAL+DMYAK G+L  A  +F   +   D V+WN +IA  + + H  
Sbjct: 556 LIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+  F QM+    +PN  T+ S L A A +     G   H  +I+M   S+ +VG  L+
Sbjct: 616 EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLI 675

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG +D +  +F+ M  K+ ++WN ++SG+  +G    A +LF  M    V  D  
Sbjct: 676 DMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 735

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +  +VL +         C+  HA  V    E    I +S+ D Y    H++         
Sbjct: 736 SFVSVLSA---------CR--HAGLV----EEGRKIFHSMSDKY----HIKP-------- 768

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              DL     M+    + GL +E L     M    + PD+ V  +LL +C   S  + G+
Sbjct: 769 ---DLEHYACMVDLLGRAGLFDETLGFIKVM---PVEPDAGVWGALLGSCRMHSNVKLGE 822

Query: 420 QVHVHIIKFGFMSDT-FAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               H++K    +   F    L ++YA+ G   DA +A S++ D G+
Sbjct: 823 VALDHLVKLEPRNPAHFV--VLSSIYAQSGRWADAGKARSKMNDLGL 867


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 319/801 (39%), Positives = 481/801 (60%), Gaps = 31/801 (3%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
            VLKA  +  DL LG Q+H  V   G    S   VANSLV MY KCG+   +R++FD IP+
Sbjct: 336  VLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPD 395

Query: 59   RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG-SGDSLLGRK 117
            R  VSWNS+ +     +  E ++  F+ M+   + P  F+L S+ +AC+   G   LG++
Sbjct: 396  RDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQ 455

Query: 118  IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            +H Y+++ G D   ++ NALV MYA++G + DA A+F   +  D+VSWN VI+    ++ 
Sbjct: 456  VHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDR 514

Query: 178  NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC-SLIKMEIKSDPIVGV 236
             + AL     M    + P+  T  S L AC+ +E   +GR++HC +L   ++  +  VG 
Sbjct: 515  FEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGT 574

Query: 237  GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VG 295
             LVDMY  C    + R++F  +  + +  WN +++G+ +N  D +A  LF  M  E    
Sbjct: 575  ALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFC 634

Query: 296  FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             + TT ++VL +    +     + +H   VK  F  D Y+ N+L+D Y + G VE +  I
Sbjct: 635  PNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTI 694

Query: 356  FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE------------------INP 397
            F   +  D+V+  +MIT     G  ++AL L  EMQ R+                    P
Sbjct: 695  FGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKP 754

Query: 398  DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
            +S    ++L  CA L+A  +GK++H + +K     D   G++LV+MYAKCG ++ A R F
Sbjct: 755  NSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVF 814

Query: 458  SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG------VLPNHITLVSVLCACN 511
             ++P R +++W+ +I     HG+G+EAL++F  M   G      + PN +T +++  AC+
Sbjct: 815  DQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACS 874

Query: 512  HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASV 570
            H+G+V E  H F +M+   G++P  +HYAC++D+LGR+G+ +EA EL++TMP   N    
Sbjct: 875  HSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA 934

Query: 571  WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
            W +LLGA RI+++VE G+ AA+ LF +EP  +S +VL+SNIY+SAG+WD    VR+ MK+
Sbjct: 935  WSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKE 994

Query: 631  NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
              ++KEPG SWIE  D+V+ F  GD SH +SKE++  L+ +S  + K GYVP +   LH+
Sbjct: 995  MGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHN 1054

Query: 691  VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
            V++ EKE +L  HSE+LA+AFGL+ TPPG TIRV KNLR+C DCH + + ISKIV REII
Sbjct: 1055 VDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREII 1114

Query: 751  VRDVNRFHHFRNGSCSCGGYW 771
            +RDV RFHHF NG+CSCG YW
Sbjct: 1115 LRDVRRFHHFANGTCSCGDYW 1135



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 276/564 (48%), Gaps = 33/564 (5%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           +  RS   W  L     H     +A+  +  M+ +   P+ F+  +++ A A   D  LG
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 116 RKIHGYSIKLGY--DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH +  K G+   S +  AN+LV+MY K G+L  A  VF DI   D VSWN++IA   
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK-ELGRQLHC-SLIKMEIKSD 231
             E  + +L LF+ M S  ++P  FT  S   AC+ +     LG+Q+H  +L   ++++ 
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRT- 468

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
                 LV MYA+ G +++A+ +F +   K+L++WN VIS   QN    EA      M  
Sbjct: 469 -YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVE 350
           +GV  D  TL++VL + +  + + + +++H  +++      + ++  +L+D Y  C   +
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNAC 409
               +F       +    +++  YA+    ++AL+L++EM  + E  P++   +S+L AC
Sbjct: 588 KGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPAC 647

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
                +   + +H +I+K GF  D +  N+L++MY++ G ++ +   F  +  R IVSW+
Sbjct: 648 VRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWN 707

Query: 470 AMIGGLAQHGRGKEALQMFGQML----EDG--------------VLPNHITLVSVLCACN 511
            MI G    GR  +AL +  +M     EDG                PN +TL++VL  C 
Sbjct: 708 TMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA 767

Query: 512 HAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
               + + K  H  ++++K  +       + ++D+  + G    A  + D MP + N   
Sbjct: 768 ALAALGKGKEIHAYAVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPIR-NVIT 824

Query: 571 WGALLGAARIYKNVEVGQHAAEML 594
           W  L+ A  ++     G+ A E+ 
Sbjct: 825 WNVLIMAYGMHGK---GEEALELF 845


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 473/771 (61%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC   + L +G Q+HG+V+  GF SD +V N+LV +Y   G+ I +  +F  + +R 
Sbjct: 277  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             V++N+L +    C + E+A+  FK M L G+ P+  +L+S++ AC+  G    G+++H 
Sbjct: 337  AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            Y+ KLG+ S+     AL+++YAK  ++E A+  F + E  ++V WN ++    L +    
Sbjct: 397  YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + ++F+QM+  EI PN +TY S LK C  +   ELG Q+H  +IK   + +  V   L+D
Sbjct: 457  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLID 516

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAK G +D A  I      K++++W  +I+G+ Q   D +A + F  M   G+  D+  
Sbjct: 517  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            L+  + + A  QA+   +Q+HA +  + F SD    N+L+  Y KCG++E+A   F+++ 
Sbjct: 577  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            A D +A  ++++ + Q G  EEAL+++  M    I+ ++F   S + A +  +  +QGKQ
Sbjct: 637  AGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ 696

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            VH  I K G+ S+T   N++++MYAKCGSI DA + F E+  +  VSW+AMI   ++HG 
Sbjct: 697  VHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGF 756

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G EAL  F QM+   V PNH+TLV VL AC+H GLV +   +FESM  ++G+ P  EHY 
Sbjct: 757  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYV 816

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+L RAG    A + +  MP + +A VW  LL A  ++KN+E+G+ AA  L  +EPE
Sbjct: 817  CVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 876

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             S+T+VLLSN+YA    WD     R+ MK+  +KKEPG SWIEVK+ +++F VGD++H  
Sbjct: 877  DSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 936

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + EI+    +++   ++ GYV    + L ++++ +K+  ++ HSEKLA++FGL++ P   
Sbjct: 937  ADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATM 996

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I V KNLR+C DCH   +F+SK+ +REIIVRD  RFHHF  G+CSC  YW
Sbjct: 997  PINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/505 (30%), Positives = 259/505 (51%), Gaps = 3/505 (0%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  ++  GFD++  ++  L+  Y   G+   + ++FD +PER++ +WN +      
Sbjct: 87  GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELAS 146

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMF 132
                +  C F  MV   + PNE + S ++ AC G   +  +  +IH   I  G      
Sbjct: 147 RSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTI 206

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N L+D+Y++ G ++ A  VF  +   D  SW A+I+G   +E    A++LF  M    
Sbjct: 207 VCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLG 266

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I P  + ++S L AC  +E  E+G QLH  ++K+   SD  V   LV +Y   GS+  A 
Sbjct: 267 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAE 326

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  M +++ + +N +I+G  Q G   +A  LF  M  +G+  D  TL++++ + +S  
Sbjct: 327 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG 386

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   +Q+HA + K  F S+D I  +L++ Y KC  +E A+  F E+   ++V    M+ 
Sbjct: 387 TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AY        + +++ +MQ  EI P+ +   S+L  C  L   E G+Q+H  IIK  F  
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           + +  + L++MYAK G +D A         + +VSW+ MI G  Q+    +AL  F QML
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566

Query: 493 EDGVLPNHITLVSVLCACNHAGLVA 517
           + G+  + + L + + AC  AGL A
Sbjct: 567 DRGIRSDEVGLTNAVSAC--AGLQA 589



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 242/474 (51%), Gaps = 9/474 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           GIRPN  +L  ++  C  +  SL  GRK+H   +KLG+D++   +  L+D Y   G+L+ 
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A+ VF ++    I +WN +I        +     LF +M +  + PN  T++  L+AC G
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 210 MELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
             +  ++  Q+H  +I   +    IV   L+D+Y++ G +D AR +F  +  K+  +W  
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG  +N  ++EA  LF  MY  G+       S+VL +    +++ + +Q+H L +K  
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F SD Y+ N+L+  Y   G +  A  IF   S  D V   ++I   +Q G GE+A++L+ 
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 361

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            MQ   + PDS   +SL+ AC++      G+Q+H +  K GF S+     +L+N+YAKC 
Sbjct: 362 RMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS 421

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            I+ A   F E     +V W+ M+         + + ++F QM  + ++PN  T  S+L 
Sbjct: 422 DIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 481

Query: 509 ACNHAG-LVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELV 559
            C   G L    + H + ++  F +      Y C  +ID+  + GK   A +++
Sbjct: 482 TCIRLGDLELGEQIHSQIIKTSFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 531



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 2/182 (1%)

Query: 395 INPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           I P+      LL  C   + + ++G+++H  I+K GF ++      L++ Y   G +D A
Sbjct: 63  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            + F E+P+R I +W+ MI  LA      +   +FG+M+ + V PN  T   VL AC   
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
            +  +      +     G+         +ID+  R G    A  + D +  + ++S W A
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS-WVA 241

Query: 574 LL 575
           ++
Sbjct: 242 MI 243


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/773 (41%), Positives = 458/773 (59%), Gaps = 3/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A  S   L    +VH   V  G   D  V N+LV MYAK G+  D+R +FD + ER 
Sbjct: 137 ILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERD 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG--RKI 118
           + SW  +          +EA   F +M   G  PN  +  S++NA A +    L   +++
Sbjct: 197 IFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEV 256

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H ++ K G+ SD+   NAL+ MYAK G+++DA  VF  +   D++SWNA+I G   +   
Sbjct: 257 HKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCG 316

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A  +F +M+     P+  TY S L         E  +++H   +++ + SD  VG   
Sbjct: 317 HEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAF 376

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V MY +CGS+D+A++IF  +  +N+  WN +I G  Q     EA SLF  M REG   D 
Sbjct: 377 VHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDA 436

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           TT   +L +    +A+   K+VH+ ++      D  + N+L+  Y KCG+   A ++F +
Sbjct: 437 TTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDD 495

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               ++   T MI+  AQ G G EA  L+L+M    I PD+    S+L+ACA+  A E  
Sbjct: 496 MVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWV 555

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K+VH H +  G +SD   GN+LV+MYAKCGS+DDA R F ++ +R + SW+ MIGGLAQH
Sbjct: 556 KEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQH 615

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG +AL +F +M  +G  PN  + V+VL AC+HAGLV E +  F S+ + +GI+P  EH
Sbjct: 616 GRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEH 675

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y CM+D+LGRAG+ +EA   +  MP +   + WGALLGA   Y N+E+ + AA+    ++
Sbjct: 676 YTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLK 735

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+ +ST+VLLSNIYA+ G W+    VR  M+   ++KEPG SWIEV +++++F VGD SH
Sbjct: 736 PKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSH 795

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             SKEIYAKL ++   L   GYVP     L + ++  KEQ L  HSEKLA+ +GL+ TP 
Sbjct: 796 PESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPY 855

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              IRV KNLR+C DCHT+ +FISK+  REI+ RD  RFHHF++G CSCG YW
Sbjct: 856 RNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 200/579 (34%), Positives = 309/579 (53%), Gaps = 5/579 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC S   L  G ++H  ++ +GF SD  V  +LV MY KCG+  D++ +FD + ER+
Sbjct: 36  ILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERN 95

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW  +     H    +EA   F +M   G  PN ++  S++NA A +G     +++H 
Sbjct: 96  VISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 155

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++  G   D+   NALV MYAK G+++DA  VF  +   DI SW  +I G   H     
Sbjct: 156 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQE 215

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGL 238
           A  LF QM+     PN+ TY S L A A      L   +++H    K    SD  VG  L
Sbjct: 216 AFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNAL 275

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MYAKCGS+D+AR++F  M ++++I+WN +I G  QNG   EA ++F  M +EG   D 
Sbjct: 276 IHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDS 335

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           TT  ++L +  S  A    K+VH  +V+    SD  + ++ +  Y +CG ++DA  IF +
Sbjct: 336 TTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDK 395

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  ++    +MI   AQ   G EAL L+L+M+     PD+    ++L+A     A E  
Sbjct: 396 LAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV 455

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K+VH + I  G + D   GN+LV+MYAKCG+   A + F ++ +R + +W+ MI GLAQH
Sbjct: 456 KEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G EA  +F QML +G++P+  T VS+L AC   G +   K    S     G+      
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVK-EVHSHAVNAGLVSDLRV 573

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              ++ +  + G   +A  + D M  + +   W  ++G 
Sbjct: 574 GNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGG 611



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 161/441 (36%), Positives = 246/441 (55%), Gaps = 2/441 (0%)

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y    + E+A+  + +M   G +PNE +  S++ AC        G+KIH + I+ G+ SD
Sbjct: 5   YAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSD 64

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +    ALV+MY K G+++DA  +F  +   +++SW  +I G   +     A   F QM+ 
Sbjct: 65  VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQR 124

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
               PN +TY S L A A     E  +++H   +   +  D  VG  LV MYAK GS+D+
Sbjct: 125 EGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD 184

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK--SV 308
           AR++F  M E+++ +W ++I G  Q+G   EA SLF  M R G   + TT  ++L   ++
Sbjct: 185 ARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAI 244

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
            S  A+   K+VH  + K  F SD  + N+LI  Y KCG ++DA  +F      D+++  
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 304

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +MI   AQ G G EA  ++L+MQ     PDS    SLLN   +  A+E  K+VH H ++ 
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           G +SD   G++ V+MY +CGSIDDA   F ++  R + +W+AMIGG+AQ   G+EAL +F
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLF 424

Query: 489 GQMLEDGVLPNHITLVSVLCA 509
            QM  +G  P+  T V++L A
Sbjct: 425 LQMRREGFFPDATTFVNILSA 445



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/413 (35%), Positives = 226/413 (54%), Gaps = 6/413 (1%)

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +I G   + + + A+K++ QM+     PN  TY S LKAC      + G+++H  +I+  
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
            +SD  V   LV+MY KCGS+D+A++IF  M E+N+I+W ++I G    G   EA   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M REG   +  T  ++L + AS  A+   K+VH+ +V      D  + N+L+  Y K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            ++DA  +F      D+ + T MI   AQ G G+EA  L+L+M+     P+     S+LN
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 408 ACANLS--AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           A A  S  A E  K+VH H  K GF+SD   GN+L++MYAKCGSIDDA   F  + DR +
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFE 524
           +SW+AMIGGLAQ+G G EA  +F +M ++G +P+  T +S+L      G     K  H  
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           ++E   G+       +  + +  R G   +A  + D +  + N + W A++G 
Sbjct: 361 AVE--VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 11/364 (3%)

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G+ + G   +A  ++  M REG   ++ T  ++LK+  S  ++   K++HA  +++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F+SD  +  +L++ Y KCG ++DA  IF +    ++++ T MI   A +G G+EA   +L
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +MQ     P+S+   S+LNA A+  A E  K+VH H +  G   D   GN+LV+MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL- 507
           SIDDA   F  + +R I SW+ MIGGLAQHGRG+EA  +F QM   G LPN  T +S+L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 508 -CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
             A    G +   K   +   K   I  ++   A +I +  + G   +A  + D M  + 
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNA-LIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE----KSSTHVLLSNIYASAGMWDNVA 622
             S W A++G   + +N   G  A  +   ++ E     S+T++ L N + S G W+ V 
Sbjct: 300 VIS-WNAMIGG--LAQN-GCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355

Query: 623 KVRR 626
           +V +
Sbjct: 356 EVHK 359


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/800 (39%), Positives = 488/800 (61%), Gaps = 30/800 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA--NSLVVMYAKCGNFIDSRRLFDAIPE 58
           VLKA    ++L+LG Q+H  V   G+ S   V   N+LV MY KCG   D+ ++FD I E
Sbjct: 16  VLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITE 75

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG--SGDSL-LG 115
           R  VSWNS+ S     +  E A+  F+ M++ G  P+ F+L SM  AC+     D L LG
Sbjct: 76  RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLG 135

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++IHG   + G+    FS NAL+ MYAK+G L+DA ++    E  D+V+WN++I+    +
Sbjct: 136 KQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQN 194

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIV 234
           E    AL   + M    + P+  T+ S L AC+ ++L   G+++H   ++ + +  +  V
Sbjct: 195 ERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFV 254

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREG 293
           G  LVDMY  CG ++  R++F  + ++ +  WN +I+G+ Q+  D +A  LF  M    G
Sbjct: 255 GSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAG 314

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  + TT+S+++ +    + I   + +H   +K   E++ Y+ N+LID Y + G ++ + 
Sbjct: 315 LYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSK 374

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE----------------INP 397
           +IF      D+V+  ++IT+Y   G   +AL L  EMQ  E                  P
Sbjct: 375 RIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKP 434

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           +S    ++L  CA+LSA  +GK++H + I+    S    G++LV+MYAKCG ++ A R F
Sbjct: 435 NSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVF 494

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-----VLPNHITLVSVLCACNH 512
            ++P R +++W+ +I     HG+GKE+L++F  M+ +G     V P  +T +++  +C+H
Sbjct: 495 DQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSH 554

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVW 571
           +G+V E    F  M+ + GI+P  +HYAC++D++GRAGK +EA  LV+TMP   +    W
Sbjct: 555 SGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAW 614

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
            +LLGA RIY N+E+G+ AAE L  ++P+ +S +VLLSNIY+SAG+WD    +RR MK  
Sbjct: 615 SSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAM 674

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            +KKEPG SWIE  D+V+ F  GD SH +S++++  L+ +S+ L K GYVP     LHD+
Sbjct: 675 GVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDI 734

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E EKE +L  HSEKLA+AFG++ TPPG TIRV KNLR+C DCHT+ +FISKI  REII+
Sbjct: 735 DEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIIL 794

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD  RFHHF++G+CSCG YW
Sbjct: 795 RDARRFHHFKDGTCSCGDYW 814



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/522 (30%), Positives = 254/522 (48%), Gaps = 42/522 (8%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA----NALVDMYA 142
           M+ SG  P+ F+  +++ A AG  +  LG++IH +  K GY S  FS+    N LV+MY 
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGS--FSSVTIDNTLVNMYG 58

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K G L DA  VF  I   D VSWN++I+     E  + A+K F+ M      P+ FT  S
Sbjct: 59  KCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVS 118

Query: 203 ALKACAGMELKE---LGRQLH-CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
              AC+ +  ++   LG+Q+H C   K   ++       L+ MYAK G +D+A+ +  L 
Sbjct: 119 MALACSNLRKRDGLWLGKQIHGCCFRKGHWRT--FSNNALMAMYAKLGRLDDAKSLLVLF 176

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            +++L+ WN +IS   QN   MEA      M  EGV  D  T ++VL + +    +   K
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236

Query: 319 QVHALSVKTAFESDDYIVNS-----LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           ++HA +++T    DD I NS     L+D Y  CG VE    +F       +    +MI  
Sbjct: 237 EIHAYALRT----DDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAG 292

Query: 374 YAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           YAQ    E+AL L++EM+    +  ++   SS++ A        + + +H ++IK G  +
Sbjct: 293 YAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLET 352

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           + +  N+L++MY++ G I  + R F  + DR IVSW+ +I      GR  +AL +  +M 
Sbjct: 353 NRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQ 412

Query: 493 E-------DG---------VLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPM 535
                   DG           PN ITL++VL  C     +A+ K  H  ++      Q  
Sbjct: 413 RIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVT 472

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               + ++D+  + G    A  + D MP + N   W  ++ A
Sbjct: 473 VG--SALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMA 511


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 309/771 (40%), Positives = 468/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT  K    G  +H  V    F S+ FV N+L+ +Y   G+F  + R+F  +    
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F EM LSG+RP+  +++S++ ACA  GD   G+++H 
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K G   D  +  +L+D+Y K G++E A  +F   +  ++V WN ++           
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           + ++F QM+++ I+PN FTY   L+ C      ELG Q+H   IK   +SD  V   L+D
Sbjct: 330 SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+K   +D+AR I  ++ ++++++W  +I+G++Q+    EA + F  M   GV  D   
Sbjct: 390 MYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++   + A  +A+    Q+HA    + + +D  I N+L++ Y +CG  E+A  +F+E  
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D +    +I+ + Q  L E+AL ++++M       + F   S ++A ANL+  +QGKQ
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K G  S+T   N+L+++Y KCGSI+DA   FSE+  R  VSW+ +I   +QHGR
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL +F QM ++G+ PN +T + VL AC+H GLV E   +F+SM   +G+ P+ +HYA
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++DILGRAG+   A   VD MP  ANA +W  LL A +++KN+E+G+ AA+ L  +EP 
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+++VLLSN YA  G W N  +VR+ MKD  ++KEPG SWIEVK+ V+ F VGDR H  
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S +IY  L E++D L+K GY        H+ E+ +K+   + HSEKLAVAFGL+  PP  
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCI 869

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +RV KNLR+C DCH+  +F S++  REI++RDV RFHHF +GSCSCG YW
Sbjct: 870 PLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 177/575 (30%), Positives = 295/575 (51%), Gaps = 3/575 (0%)

Query: 2   LKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L+AC  + + + L L++H   V  G  +D  + N L+ +YAK G    +R++F  +  R 
Sbjct: 49  LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ S Y      +EA   + +M  + + P  + LSS+++AC        GR IH 
Sbjct: 109 HVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHA 168

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K  + S+ F  NAL+ +Y   G+ + A  VF D+   D V++N +I+G     H + 
Sbjct: 169 QVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++F +M+ S + P+  T  S L ACA +   + G+QLH  L+K  +  D I    L+D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KCG ++ A  IF+L    N++ WN+++  + Q     ++  +F  M   G+  ++ T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L++      I + +Q+H+LS+K  FESD Y+   LID Y K   ++ A KI +   
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ TSMI  Y Q    EEAL  + EMQD  + PD+   +S  +ACA + A  QG Q
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +   G+ +D    N+LVN+YA+CG  ++A   F EI  +  ++W+ +I G  Q   
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            ++AL +F +M + G   N  T +S + A  +   + + K        K G     E   
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGK-QVHGRAVKTGHTSETEVAN 587

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            +I + G+ G  ++A  +   M  +   S W  ++
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTII 621


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 315/800 (39%), Positives = 490/800 (61%), Gaps = 30/800 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLKA +  +DL  G Q+H   V  G+ S    VAN+LV MY KCG   D  ++FD I +R
Sbjct: 98  VLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDR 157

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---DSLLGR 116
             VSWNS  +     +  E+A+  F+ M +  +  + F+L S+  AC+  G      LG+
Sbjct: 158 DQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGK 217

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++HGYS+++G D   F+ NAL+ MYAK+G ++D+ A+F+     D+VSWN +I+     +
Sbjct: 218 QLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSD 276

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVG 235
               AL  F+ M    +  +  T  S L AC+ +E  ++G+++H  +++  ++  +  VG
Sbjct: 277 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGV 294
             LVDMY  C  ++  R +F  +  + +  WN +ISG+ +NG D +A  LF  M +  G+
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 396

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             + TT+++V+ +    +A    + +H  +VK  F+ D Y+ N+L+D Y + G ++ +  
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-----------------INP 397
           IF      D V+  +MIT Y   G    AL L  EMQ  E                   P
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           ++    ++L  CA L+A  +GK++H + I+    SD   G++LV+MYAKCG ++ + R F
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-----VLPNHITLVSVLCACNH 512
           +E+P++ +++W+ +I     HG+G+EAL++F  M+ +        PN +T ++V  AC+H
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVW 571
           +GL++E  + F  M+   G++P  +HYAC++D+LGRAG+ +EA ELV+TMP + +    W
Sbjct: 637 SGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAW 696

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
            +LLGA RI++NVE+G+ AA+ L  +EP  +S +VLLSNIY+SAG+W+   +VR+ M+  
Sbjct: 697 SSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQM 756

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            +KKEPG SWIE +D+V+ F  GD SH +S++++  L+ +S+ + K GYVP     LH+V
Sbjct: 757 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNV 816

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E EKE LL  HSEKLA+AFG++ TPPG TIRV KNLR+C DCH + +FISKI+ REIIV
Sbjct: 817 DEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIV 876

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RDV RFHHF+ G+CSCG YW
Sbjct: 877 RDVRRFHHFKEGTCSCGDYW 896



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 276/565 (48%), Gaps = 37/565 (6%)

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           P RS  SW          +   EA+  + EM +SG RP+ F+  +++ A +G  D   G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 117 KIHGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +IH  ++K GY S   + AN LV+MY K G + D   VF  I   D VSWN+ IA     
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK---ELGRQLHCSLIKMEIKSDP 232
           E  + AL+ F+ M+   +  + FT  S   AC+ + +     LG+QLH   +++      
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                L+ MYAK G +D+++ +F    ++++++WN +IS   Q+    EA + F  M  E
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVED 351
           GV  D  T+++VL + +  + + V K++HA  ++      + ++ ++L+D Y  C  VE 
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACA 410
             ++F       +    +MI+ YA+ GL E+AL L++EM +   + P++   +S++ AC 
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +  A+   + +H + +K GF  D +  N+L++MY++ G +D ++  F  +  R  VSW+ 
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471

Query: 471 MIGGLAQHGRGKEALQMFGQM--LEDGVL---------------PNHITLVSVLCACNHA 513
           MI G    GR   AL +  +M  +E+                  PN ITL++VL  C   
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANAS 569
             +A+ K         + I+ M        + ++D+  + G    +  + + MP   N  
Sbjct: 532 AAIAKGKE-----IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVI 585

Query: 570 VWGALLGAARIYKNVEVGQHAAEML 594
            W  L+ A  ++     G+ A E+ 
Sbjct: 586 TWNVLIMACGMHGK---GEEALELF 607


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 305/771 (39%), Positives = 474/771 (61%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL ACT  +   +G Q+HG+V+  GF  + +V N+LV +Y++ GNFI + ++F+A+ +R 
Sbjct: 277  VLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD 336

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             VS+NSL S      + ++A+  FK+M L  ++P+  +++S+++AC+  G  L+G++ H 
Sbjct: 337  EVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHS 396

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            Y+IK G  SD+    AL+D+Y K  +++ A   F   E  ++V WN ++    L ++ + 
Sbjct: 397  YAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNE 456

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + K+F QM+   I PN FTY S L+ C+ +   +LG Q+H  ++K   + +  V   L+D
Sbjct: 457  SFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLID 516

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAK G +D A  IF  + EK++++W  +I+G+ Q+    EA +LF  M  +G+  D   
Sbjct: 517  MYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIG 576

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++ + + A  QA+   +Q+HA +  + +  D  + N+L+  Y +CG V DA   F +  
Sbjct: 577  FASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIF 636

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            + D ++  S+I+ +AQ G  EEAL L+ +M       +SF     ++A AN++  + GKQ
Sbjct: 637  SKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQ 696

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            +H  IIK G  S+T   N L+ +YAKCG+IDDA+R F E+P++  +SW+AM+ G +QHG 
Sbjct: 697  IHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGH 756

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G +AL +F  M + GVLPNH+T V VL AC+H GLV E   +F+SM +  G+ P  EHYA
Sbjct: 757  GFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYA 816

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+LGR+G    A   V+ MP Q +A V   LL A  ++KN+++G+ AA  L  +EP+
Sbjct: 817  CVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPK 876

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             S+T+VLLSN+YA  G W    + R+ MKD  +KKEPG SWIEV + V+ F  GD+ H  
Sbjct: 877  DSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPN 936

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
              +IY  L ++++L  + GY+P   + L+D E  +K      HSEKLA+AFGL++     
Sbjct: 937  VDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSST 996

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I V KNLR+C DCH   +++SKI  R I+VRD  RFHHF+ G CSC  YW
Sbjct: 997  PIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 304/580 (52%), Gaps = 11/580 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S      G ++HG ++  GF ++  +   L+ +Y   G+   +  +FD +P R 
Sbjct: 74  LLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRP 133

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG--RKI 118
           +  WN +   +V        +  F+ M+   ++P+E + + ++  C G GD       KI
Sbjct: 134 LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKI 192

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  +I  GY++ +F  N L+D+Y K G L  A  VF  ++  D VSW A+++G       
Sbjct: 193 HARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCE 252

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A+ LF QM +S + P  + ++S L AC  +E  ++G QLH  ++K     +  V   L
Sbjct: 253 EEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNAL 312

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V +Y++ G+   A  +F+ M +++ +++N +ISG  Q G   +A  LF  M  + +  D 
Sbjct: 313 VTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDC 372

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T++++L + +S  A+ V KQ H+ ++K    SD  +  +L+D Y KC  ++ A + F  
Sbjct: 373 VTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS 432

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           +   ++V    M+ AY       E+ K++ +MQ   I P+ F   S+L  C++L A + G
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +Q+H  ++K GF  + +  + L++MYAK G +D A + F  + ++ +VSW+AMI G AQH
Sbjct: 493 EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQH 552

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
            +  EAL +F +M + G+  ++I   S + AC  AG+  +A +  + +  +  +    + 
Sbjct: 553 EKFAEALNLFKEMQDQGIHSDNIGFASAISAC--AGI--QALNQGQQIHAQACVSGYSDD 608

Query: 539 YA---CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            +    ++ +  R GK ++A    D +  + N S W +L+
Sbjct: 609 LSVGNALVSLYARCGKVRDAYFAFDKIFSKDNIS-WNSLI 647



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 243/499 (48%), Gaps = 3/499 (0%)

Query: 80  AVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
            + F   M   G+R N  +   +++ C  SG    G K+HG  +K+G+ +++     L+D
Sbjct: 52  GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           +Y   G+L+ AV VF ++    +  WN V+   V  +     L LF++M   ++ P+  T
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171

Query: 200 YTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           Y   L+ C G ++      ++H   I    ++   V   L+D+Y K G ++ A+ +F  +
Sbjct: 172 YAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGL 231

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            +++ ++W  ++SG  Q+G + EA  LF  M+  GV       S+VL +    +   V +
Sbjct: 232 QKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGE 291

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q+H L +K  F  + Y+ N+L+  Y + G+   A ++F      D V+  S+I+  +Q G
Sbjct: 292 QLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             ++AL+L+ +M    + PD    +SLL+AC+++ A   GKQ H + IK G  SD     
Sbjct: 352 YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEG 411

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +L+++Y KC  I  A   F       +V W+ M+          E+ ++F QM  +G+ P
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           N  T  S+L  C+    V +      +   K G Q      + +ID+  + GK   A+++
Sbjct: 472 NQFTYPSILRTCSSLRAV-DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530

Query: 559 VDTMPFQANASVWGALLGA 577
              +  + +   W A++  
Sbjct: 531 FRRLK-EKDVVSWTAMIAG 548


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 289/771 (37%), Positives = 466/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + C   +D  LG QV   ++ +G   + +  N+L+ +++ CGN +++R+ FD++  ++
Sbjct: 67  LFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKT 126

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN++ + Y     ++EA   F++MV   + P+  +   +++AC+      LG++ H 
Sbjct: 127 VVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHA 186

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK+G+ SD     ALV MY K G+++ A  VF  +   D+ ++N +I G       + 
Sbjct: 187 QVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEK 246

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +LF +M+     PN  ++ S L  C+  E    G+ +H   +   +  D  V   L+ 
Sbjct: 247 AFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIR 306

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY  CGS++ AR +F  M  +++++W ++I G+ +N    +A  LF  M  EG+  D+ T
Sbjct: 307 MYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRIT 366

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              ++ + AS   + + +++H+  V+  F +D  +  +L+  Y KCG ++DA ++F   S
Sbjct: 367 YIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS 426

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ ++MI AY + G GEEA + +  M+   + PD     +LLNAC +L A + G +
Sbjct: 427 RRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGME 486

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           ++   IK   +S    GN+L+NM  K GSI+ A   F  +  R +V+W+ MIGG + HG 
Sbjct: 487 IYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGN 546

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +EAL +F +ML++   PN +T V VL AC+ AG V E +  F  +    GI P  E Y 
Sbjct: 547 AREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYG 606

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+LGRAG+  EA  L++ MP + N+S+W  LL A RIY N++V + AAE     EP 
Sbjct: 607 CMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPY 666

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             + +V LS++YA+AGMW+NVAKVR+ M+   ++KE G +WIEV+ K++TF V DRSH +
Sbjct: 667 DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQ 726

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           + EIYA+L  +   + + GY+P+ +  LH+V E EKE+ + +HSEKLA+A+G+++ P GA
Sbjct: 727 AGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGA 786

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IR+ KNLR+C DCH++ +FISK+  REII RD +RFHHF+NG CSCG YW
Sbjct: 787 PIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 10/333 (3%)

Query: 289 MYREGVG---FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           ++R G G    D  T   + +     +  G+ KQV    +++  + + Y +N+LI  +  
Sbjct: 49  LHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSI 108

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG++ +A + F       +V   ++I  YAQ G  +EA  L+ +M D  + P       +
Sbjct: 109 CGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIV 168

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L+AC++ +  + GK+ H  +IK GF+SD   G +LV+MY K GS+D A + F  +  R +
Sbjct: 169 LDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDV 228

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFE 524
            +++ MIGG A+ G G++A Q+F +M ++G  PN I+ +S+L  C+    +A  K  H +
Sbjct: 229 STFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQ 288

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
            M    G+         +I +    G  + A  + D M  +   S W  ++       N+
Sbjct: 289 CMNT--GLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVS-WTVMIRGYAENSNI 345

Query: 585 E--VGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
           E   G  A      I+P++  T++ + N  AS+
Sbjct: 346 EDAFGLFATMQEEGIQPDR-ITYIHIINACASS 377


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 314/726 (43%), Positives = 456/726 (62%), Gaps = 3/726 (0%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           S++LFD  P++ +   N L   +   D  +EA+  F  +  SG   +  SLS ++  C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
             D ++G+++H   IK G+  D+    +LVDMY K  ++ED   VF ++   ++VSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           +AG   +  N+ ALKLF QM+   I PN FT+ + L   A     E G Q+H  +IK  +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            S   VG  +V+MY+K   + +A+ +F  M  +N ++WN +I+G + NG D+EA  LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M  EGV   QT  +TV+K  A+ + +   KQ+H   +K   + D  I  +L+ AY KC  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 349 VEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLL 406
           ++DA K+F     V ++V+ T++I+ Y Q G  + A+ L+ +M+  E + P+ F  SS+L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404

Query: 407 NACANLSA-YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           NACA  +A  EQGKQ H   IK GF +     ++LV MYAK G+I+ A+  F    DR +
Sbjct: 405 NACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 464

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW++MI G AQHG GK++L++F +M    +  + IT + V+ AC HAGLV E + +F+ 
Sbjct: 465 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 524

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           M K + I P  EHY+CM+D+  RAG  ++AM+L++ MPF A A++W  LL A R++ NV+
Sbjct: 525 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQ 584

Query: 586 VGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVK 645
           +G+ AAE L +++P+ S+ +VLLSNIYA+AG W   AKVR+ M   K+KKE G SWIEVK
Sbjct: 585 LGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK 644

Query: 646 DKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSE 705
           +K ++F  GD SH +S  IY KL+E+S  L  AGY P  +  LHDVEE  KE +L  HSE
Sbjct: 645 NKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSE 704

Query: 706 KLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSC 765
           +LA+AFGLIATPPG  I++ KNLR+C DCHT  + ISKI  R+I+VRD NRFHHF+ GSC
Sbjct: 705 RLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSC 764

Query: 766 SCGGYW 771
           SCG YW
Sbjct: 765 SCGDYW 770



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 265/483 (54%), Gaps = 5/483 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C    D  +G QVH   +  GF  D  V  SLV MY K  +  D  R+FD +  ++
Sbjct: 98  VLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN 157

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL + Y      E+A+  F +M L GI+PN F+ ++++   A  G    G ++H 
Sbjct: 158 VVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G DS +F  N++V+MY+K   + DA AVF  +E+ + VSWN++IAG V +  +  
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +LF +M+   +      + + +K CA ++     +QLHC +IK     D  +   L+ 
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQ 298
            Y+KC  +D+A  +F +M   +N+++W  +ISG++QNG    A +LF  M R EGV  ++
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNE 397

Query: 299 TTLSTVLKSVASFQA-IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T S+VL + A+  A +   KQ H+ S+K+ F +   + ++L+  Y K G++E A ++FK
Sbjct: 398 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 457

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                DLV+  SMI+ YAQ G G+++LK++ EM+ + +  D      +++AC +     +
Sbjct: 458 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE 517

Query: 418 GKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           G++    ++K   +  T    S +V++Y++ G ++ A    +++P   G   W  ++   
Sbjct: 518 GQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAAC 577

Query: 476 AQH 478
             H
Sbjct: 578 RVH 580


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 308/756 (40%), Positives = 457/756 (60%), Gaps = 3/756 (0%)

Query: 17   VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
            +HG V    F S   V+N L+ +Y+KCG+   +RR+FD + ++  VSW ++ + Y H   
Sbjct: 252  IHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 77   LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
              E +  F +M L  +R N+ S  S   A A + D   G++IHG +++   DSD+  A  
Sbjct: 310  FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 137  LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
            L+ MYAK G  E A  +F  ++  D+V+W+A+IA  V   + + AL LFQ+M++ ++ PN
Sbjct: 370  LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 197  MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
              T  S L ACA + L +LG+ +HC  +K ++ SD   G  LV MYAKCG    A   F+
Sbjct: 430  RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489

Query: 257  LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
             M  ++++ WN +I+G+ Q G    A  +F  +    +  D  T+  V+ + A    +  
Sbjct: 490  RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549

Query: 317  CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYA 375
               +H L VK  FESD ++ N+LID Y KCG +  A  +F ++    D V    +I AY 
Sbjct: 550  GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609

Query: 376  QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
            Q G  +EA+  + +M+    +P+S    S+L A A L+A+ +G   H  II+ GF+S+T 
Sbjct: 610  QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL 669

Query: 436  AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             GNSL++MYAKCG +  +++ F+E+  +  VSW+AM+ G A HG G  A+ +F  M E  
Sbjct: 670  VGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 729

Query: 496  VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            V  + ++ VSVL AC H GLV E +  F SM  K+ I+P  EHYACM+D+LGRAG F E 
Sbjct: 730  VQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDET 789

Query: 556  MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            +  +  MP + +A VWGALLG+ R++ NV++G+ A + L  +EP   +  V+LS+IYA +
Sbjct: 790  LGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS 849

Query: 616  GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            G W +  K R  M D  LKK PG SW+E+K+KV+ F VGD+SH + + ++   + + + +
Sbjct: 850  GRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKM 909

Query: 676  NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
             K GYVP     L +VEE +KE  LY HSE+LA+ F L+ TPPG+TI++ KNLR+C DCH
Sbjct: 910  EKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCH 969

Query: 736  TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T+ +FISKI +R IIVRD  RFHHF +G CSC  YW
Sbjct: 970  TTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 187/585 (31%), Positives = 306/585 (52%), Gaps = 11/585 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT   +L  G+  HG +   G + D F+   LV MY+K G+   +R +FD +P+R 
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRD 194

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN++ +     +   EAV FF+ M L G+ P+  SL ++        +  L R IHG
Sbjct: 195 VVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHG 254

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +  + S +  +N L+D+Y+K G+++ A  VF  +   D VSW  ++AG   + HN  
Sbjct: 255 YVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG---YAHNGC 309

Query: 181 ---ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
               L+LF +MK   +  N  +  SA  A A     E G+++H   ++  I SD +V   
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MYAKCG  ++A+ +F  +  ++L+AW+ +I+  +Q G   EA SLF  M  + +  +
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + TL ++L + A    + + K +H  +VK   +SD     +L+  Y KCG    A+  F 
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             S+ D+V   S+I  YAQ G    A+ ++ +++   INPD+     ++ ACA L+  +Q
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           G  +H  I+K GF SD    N+L++MYAKCGS+  A+  F++    +  V+W+ +I    
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G  KEA+  F QM  +   PN +T VSVL A  +     E    F +   + G     
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFLSNT 668

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
                +ID+  + G+   + +L + M  +   S W A+L    ++
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVH 712



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/574 (29%), Positives = 289/574 (50%), Gaps = 8/574 (1%)

Query: 6   TSKKDLFLGLQVHGIVVFTGFDSDEFVAN--SLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           +S K L   LQ+H  ++ +GF     + +  +L  ++ KC     +R +FD+ P  S + 
Sbjct: 40  SSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARSVFDSTPNPSRIL 96

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           WNS+   Y       EA+  +  MV  G+ P++++ + ++ AC G+ +   G   HG   
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           + G + D+F    LVDMY+K+G+L+ A  VF  +   D+V+WNA+IAG    E    A+ 
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
            F+ M+   + P+  +  +       +   EL R +H  + + +  S   V  GL+D+Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYS 274

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
           KCG +D AR +F  M +++ ++W  +++G+  NG  +E   LF  M    V  ++ +  +
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
              + A    +   K++H  +++   +SD  +   L+  Y KCG  E A ++F      D
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           LVA +++I A  Q G  EEAL L+ EMQ++++ P+     S+L ACA+LS  + GK +H 
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
             +K    SD   G +LV+MYAKCG    A   F+ +  R IV+W+++I G AQ G    
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+ MF ++    + P+  T+V V+ AC     + +       +  K G +        +I
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALI 573

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           D+  + G    A  L +   F  +   W  ++ A
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/479 (32%), Positives = 253/479 (52%), Gaps = 9/479 (1%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           DL  G ++HG  +    DSD  VA  L+VMYAKCG    +++LF  +  R +V+W+++ +
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
             V   + EEA+  F+EM    ++PN  +L S++ ACA      LG+ IH +++K   DS
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D+ +  ALV MYAK G    A+  F  +   DIV+WN++I G         A+ +F +++
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR 523

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
            S INP+  T    + ACA +   + G  +H  ++K+  +SD  V   L+DMYAKCGS+ 
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583

Query: 250 EARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            A  +F+     K+ + WN++I+ ++QNG   EA S F  M  E    +  T  +VL + 
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A   A       HA  ++  F S+  + NSLID Y KCG +  + K+F E    D V+  
Sbjct: 644 AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWN 703

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIK 427
           +M++ YA  G G+ A+ L+  MQ+ ++  DS    S+L+AC +    E+G+++ H    K
Sbjct: 704 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDK 763

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI----PDRGIVSWSAMIGGLAQHGRGK 482
           +    D      +V++  + G  D+    F ++    PD G+  W A++G    H   K
Sbjct: 764 YHIKPDLEHYACMVDLLGRAGLFDET-LGFIKVMPVEPDAGV--WGALLGSCRMHSNVK 819



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 232/492 (47%), Gaps = 13/492 (2%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   I  G+     S   L+++Y+     + A +VF    +P  + WN++I      +
Sbjct: 50  QIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + AL+++  M    + P+ +T+T  LKAC G    + G   H  + +  ++ D  +G 
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           GLVDMY+K G +  AR +F  MP+++++AWN +I+G  Q+    EA   F  M   GV  
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              +L  +   +     I +C+ +H    +  F S   + N LID Y KCG V+ A ++F
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVF 286

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +    D V+  +M+  YA  G   E L+L+ +M+   +  +     S   A A     E
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +GK++H   ++    SD      L+ MYAKCG  + A + F  +  R +V+WSA+I  L 
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q G  +EAL +F +M    + PN +TL+S+L AC    L+   K        K  +    
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK-SIHCFTVKADMDSDL 465

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF- 595
                ++ +  + G F  A+   + M  + +   W +L+     Y  +    +A +M + 
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLING---YAQIGDPYNAIDMFYK 521

Query: 596 ----AIEPEKSS 603
               AI P+  +
Sbjct: 522 LRLSAINPDAGT 533



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 222/467 (47%), Gaps = 37/467 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L LG  +H   V    DSD     +LV MYAKCG F  +   F+ +  R 
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNSL + Y        A+  F ++ LS I P+  ++  ++ ACA   D   G  IHG
Sbjct: 496 IVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHG 555

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHEHND 179
             +KLG++SD    NAL+DMYAK G+L  A  +F   +   D V+WN +IA  + + H  
Sbjct: 556 LIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+  F QM+    +PN  T+ S L A A +     G   H  +I+M   S+ +VG  L+
Sbjct: 616 EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLI 675

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG +  +  +F+ M  K+ ++WN ++SG+  +G    A +LF  M    V  D  
Sbjct: 676 DMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 735

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +  +VL +         C+    +      E    I +S+ D Y    H++         
Sbjct: 736 SFVSVLSA---------CRHXGLV------EEGRKIFHSMSDKY----HIKP-------- 768

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              DL     M+    + GL +E L     M    + PD+ V  +LL +C   S  + G+
Sbjct: 769 ---DLEHYACMVDLLGRAGLFDETLGFIKVM---PVEPDAGVWGALLGSCRMHSNVKLGE 822

Query: 420 QVHVHIIKFGFMSDT-FAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               H++K    +   F    L ++YA+ G   DA +A S++ D G+
Sbjct: 823 VALDHLVKLEPRNPAHFV--VLSSIYAQSGRWADAGKARSKMNDLGL 867


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 308/771 (39%), Positives = 468/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT  K    G  +H  V    F S+ FV N+L+ +Y   G+F  + R+F  +    
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F EM LSG+RP+  +++S++ ACA  GD   G+++H 
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K G   D  +  +L+D+Y K G++E A  +F   +  ++V WN ++           
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           + ++F QM+++ I+PN FTY   L+ C      ELG Q+H   IK   +SD  V   L+D
Sbjct: 330 SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+K G +D+AR I  ++ ++++++W  +I+G++Q+    EA + F  M   GV  D   
Sbjct: 390 MYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++   + A  +A+    Q+HA    + + +D  I N+L++ Y +CG  E+A  +F+E  
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D +    +I+ + Q  L ++AL ++++M       + F   S ++A ANL+  +QGKQ
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K G  S+T   N+L+++Y KCGSI+DA   FSE+  R  VSW+ +I   +QHGR
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL +F QM ++G+ PN +T + VL AC+H GLV E   +F+SM   +G+ P+ +HYA
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++DILGRAG+   A   VD MP  ANA +W  LL A +++KN+E+G+ AA+ L  +EP 
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+++VLLSN YA  G W N  +VR+ MKD  ++KEPG SWIEVK+ V+ F VGDR H  
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S +IY  L E++D L+K GY        H+ E+ +K+   + HSEKLAVAFGL+  PP  
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCI 869

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +RV KNLR+C DCH+  +  S++  REI++RDV RFHHF +GSCSCG YW
Sbjct: 870 PLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 180/575 (31%), Positives = 296/575 (51%), Gaps = 3/575 (0%)

Query: 2   LKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L+AC  + + + L L++H   V  G  +D  + N L+ +YAK G    +R++F  +  R 
Sbjct: 49  LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ S Y      +EA   + +M  + + P  + LSS+++AC        GR IH 
Sbjct: 109 HVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHA 168

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K  + S+ F  NAL+ +Y   G+ + A  VF D+   D V++N +I+G     H + 
Sbjct: 169 QVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++F +M+ S + P+  T  S L ACA +   + G+QLH  L+K  +  D I    L+D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KCG ++ A  IF+L    N++ WN+++  + Q     ++  +F  M   G+  +Q T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L++      I + +Q+H+LS+K  FESD Y+   LID Y K G ++ A KI +   
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ TSMI  Y Q    EEAL  + EMQD  + PD+   +S  +ACA + A  QG Q
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +   G+ +D    N+LVN+YA+CG  ++A   F EI  +  ++W+ +I G  Q   
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            K+AL +F +M + G   N  T +S + A  +   + + K        K G     E   
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGK-QVHGRAVKTGHTSETEVAN 587

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            +I + G+ G  ++A  +   M  +   S W  ++
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTII 621


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 305/758 (40%), Positives = 457/758 (60%), Gaps = 11/758 (1%)

Query: 24   TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER---------SVVSWNSLFSCYVHC 74
            TGF  D+    +L  +  KC   I   + F A   +          V+ WN   S ++  
Sbjct: 855  TGFRPDDVTLRTLSRV-VKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQR 913

Query: 75   DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
                EAV  F +M+ S +  +  +   M+   AG     LG++IHG  ++ G D  +   
Sbjct: 914  GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVG 973

Query: 135  NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
            N L++MY K G++  A +VF  +   D++SWN +I+GC L    + ++ +F  +    + 
Sbjct: 974  NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033

Query: 195  PNMFTYTSALKACAGMELKE-LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+ FT  S L+AC+ +E    L  Q+H   +K  +  D  V   L+D+Y+K G M+EA  
Sbjct: 1034 PDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEF 1093

Query: 254  IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            +F      +L +WN ++ G++ +G   +A  L+  M   G   DQ TL    K+      
Sbjct: 1094 LFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVG 1153

Query: 314  IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
            +   KQ+HA+ VK  F  D ++ + ++D Y KCG +E A ++F E  + D VA T+MI+ 
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213

Query: 374  YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
              + G  E AL  Y +M+  ++ PD +  ++L+ AC+ L+A EQG+Q+H +I+K     D
Sbjct: 1214 CVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFD 1273

Query: 434  TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             F   SLV+MYAKCG+I+DA   F     R I SW+AMI GLAQHG  KEALQ F  M  
Sbjct: 1274 PFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333

Query: 494  DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
             GV+P+ +T + VL AC+H+GLV+EA  +F SM+K +GI+P  EHY+C++D L RAG+ +
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIE 1393

Query: 554  EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            EA +++ +MPF+A+AS++  LL A R+  + E G+  AE L A+EP  S+ +VLLSN+YA
Sbjct: 1394 EAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYA 1453

Query: 614  SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
            +A  W+NVA  R  M+   +KK+PG SW+++K+KV+ F  GDRSH  +  IY K++ +  
Sbjct: 1454 AANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMK 1513

Query: 674  LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
             + + GYVP  +  L DVEE +KE  LY+HSEKLA+A+GL+ TPP  T+RV KNLR+C D
Sbjct: 1514 RIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGD 1573

Query: 734  CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            CH++ ++ISK+  REI++RD NRFHHFRNG CSCG YW
Sbjct: 1574 CHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 248/453 (54%), Gaps = 2/453 (0%)

Query: 11   LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
            L LG Q+HGIV+ +G D    V N L+ MY K G+   +R +F  + E  ++SWN++ S 
Sbjct: 951  LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010

Query: 71   YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG-SGDSLLGRKIHGYSIKLGYDS 129
                   E +V  F  ++   + P++F+++S++ AC+   G   L  +IH  ++K G   
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVL 1070

Query: 130  DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            D F + AL+D+Y+K G +E+A  +F + +  D+ SWNA++ G ++      AL+L+  M+
Sbjct: 1071 DSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQ 1130

Query: 190  SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
             S    +  T  +A KA  G+   + G+Q+H  ++K     D  V  G++DMY KCG M+
Sbjct: 1131 ESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEME 1190

Query: 250  EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
             AR +F  +P  + +AW  +ISG ++NG +  A   +  M    V  D+ T +T++K+ +
Sbjct: 1191 SARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACS 1250

Query: 310  SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               A+   +Q+HA  VK     D +++ SL+D Y KCG++EDA  +FK ++   + +  +
Sbjct: 1251 LLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNA 1310

Query: 370  MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-F 428
            MI   AQ G  +EAL+ +  M+ R + PD      +L+AC++     +  +    + K +
Sbjct: 1311 MIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNY 1370

Query: 429  GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            G   +    + LV+  ++ G I++A++  S +P
Sbjct: 1371 GIEPEIEHYSCLVDALSRAGRIEEAEKVISSMP 1403



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 272/572 (47%), Gaps = 42/572 (7%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
            +L+   +  DL LG + H  ++ +G   D FV N+L+ MYAKCG+   +R+LFD  P+  
Sbjct: 662  ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN 721

Query: 59   RSVVSWNSLFSCYV-HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            R +V+WN++ S    H D   +    F+ +  S +     +L+ +   C  S        
Sbjct: 722  RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781

Query: 118  IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN----AVIAGCV 173
            +HGY++K+G   D+F A ALV++YAK G + +A  +F  +   D+V WN    A +  C+
Sbjct: 782  LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841

Query: 174  LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
             +E    A+ LF +   +   P+  T            L+ L R + C    +E+K    
Sbjct: 842  EYE----AMLLFSEFHRTGFRPDDVT------------LRTLSRVVKCKKNILELKQFKA 885

Query: 234  VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
                L  MY   GS              ++I WN  +S  LQ G   EA   F  M    
Sbjct: 886  YATKLF-MYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 294  VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
            V  D  T   +L  VA    + + KQ+H + +++  +    + N LI+ Y K G V  A 
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 354  KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
             +F + + VDL++  +MI+     GL E ++ +++ +    + PD F  +S+L AC++L 
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050

Query: 414  -AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              Y    Q+H   +K G + D+F   +L+++Y+K G +++A+  F       + SW+A++
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 473  GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVAEAKHHFESMEKKFG 531
             G    G   +AL+++  M E G   + ITLV+   A     GL    + H   +++ F 
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170

Query: 532  IQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
            +       + ++D+  + G+ + A  +   +P
Sbjct: 1171 LDLFVT--SGVLDMYLKCGEMESARRVFSEIP 1200



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 220/447 (49%), Gaps = 37/447 (8%)

Query: 1    VLKACTS-KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
            VL+AC+S +   +L  Q+H   +  G   D FV+ +L+ +Y+K G   ++  LF      
Sbjct: 1042 VLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF 1101

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             + SWN++   Y+      +A+  +  M  SG R ++ +L +   A  G      G++IH
Sbjct: 1102 DLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIH 1161

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               +K G++ D+F  + ++DMY K G +E A  VF +I  PD V+W  +I+GCV +   +
Sbjct: 1162 AVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEE 1221

Query: 180  WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             AL  + QM+ S++ P+ +T+ + +KAC+ +   E GRQ+H +++K+    DP V   LV
Sbjct: 1222 HALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLV 1281

Query: 240  DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            DMYAKCG++++AR +F     + + +WN +I G  Q+G   EA   F +M   GV  D+ 
Sbjct: 1282 DMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRV 1341

Query: 300  TLSTVLKSVASFQAIG-VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL + +    +    +  +++      E +    + L+DA  + G +E+A K+   
Sbjct: 1342 TFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVI-- 1399

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
             S++   A  SM                                 +LLNAC      E G
Sbjct: 1400 -SSMPFEASASMY-------------------------------RTLLNACRVQVDRETG 1427

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYA 445
            K+V   ++     SD+ A   L N+YA
Sbjct: 1428 KRVAEKLLALE-PSDSAAYVLLSNVYA 1453



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 209/460 (45%), Gaps = 34/460 (7%)

Query: 101  SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-- 158
            S++     + D  LG++ H   +  G+  D F  N L+ MYAK G+L  A  +F      
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 159  HPDIVSWNAVIAGCVLH-EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
            + D+V+WNA+++    H + +     LF+ ++ S ++    T     K C          
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 218  QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
             LH   +K+ ++ D  V   LV++YAK G + EAR++F  M  ++++ WN+++  ++   
Sbjct: 781  SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 278  GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
             + EA  LF   +R G   D  TL T+ + V   + I   KQ  A + K     DD    
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDD---- 896

Query: 338  SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
                                     D++     ++ + Q G   EA+  +++M +  +  
Sbjct: 897  -----------------------GSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933

Query: 398  DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
            D      +L   A L+  E GKQ+H  +++ G       GN L+NMY K GS+  A   F
Sbjct: 934  DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993

Query: 458  SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN--HAGL 515
             ++ +  ++SW+ MI G    G  + ++ MF  +L D +LP+  T+ SVL AC+    G 
Sbjct: 994  GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGY 1053

Query: 516  VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
                + H  +M  K G+         +ID+  + GK +EA
Sbjct: 1054 YLATQIHACAM--KAGVVLDSFVSTALIDVYSKRGKMEEA 1091



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           C S+L      S    GK+ H  I+  G   D F  N+L+ MYAKCGS+  A + F   P
Sbjct: 659 CFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718

Query: 462 D--RGIVSWSAMIGGLAQHG-RGKEALQMFGQMLEDGVLPNHITLVSV--LCACNHAGLV 516
           D  R +V+W+A++  LA H  +  +   +F  +    V     TL  V  +C  + +   
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
           +E+ H +     K G+Q        +++I  + G  +EA  L D M  + +  +W  ++ 
Sbjct: 779 SESLHGYAV---KIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMK 834

Query: 577 A 577
           A
Sbjct: 835 A 835


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 300/771 (38%), Positives = 467/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  CT  K   +G Q+H +V   G   + +V N+LV +Y++  NF+ + ++F  +  + 
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+NSL S      F + A+  F +M    ++P+  +++S+++ACA +G    G ++H 
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK G  SDM    AL+D+Y    +++ A  +F   +  ++V WN ++      ++   
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           + ++F+QM+   + PN FTY S L+ C  +   +LG Q+H  +IK   + +  V   L+D
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLID 458

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK G +D A +I   + E ++++W  +ISG+ Q+    EA   F  M   G+  D   
Sbjct: 459 MYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIG 518

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+ + + A  QA+   +Q+HA S  + +  D  I N+L+  Y +CG +++A   F++  
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 578

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D ++   +I+ +AQ G  E+ALK++ +M   ++    F   S ++A AN++  +QGKQ
Sbjct: 579 AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ 638

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK GF SD    N+L+  YAKCGSI+DA R F E+P++  VSW+AMI G +QHG 
Sbjct: 639 IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGY 698

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EA+ +F +M + G +PNH+T V VL AC+H GLV +   +FESM K+ G+ P   HYA
Sbjct: 699 GNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYA 758

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D++ RAG    A + ++ MP + +A++W  LL A  ++KNVEVG+ AA+ L  +EPE
Sbjct: 759 CVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPE 818

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+T+VLLSN+YA +G WD   + R+ M++  +KKEPG SWIEVK+ V+ F VGDR H  
Sbjct: 819 DSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPL 878

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           + +IY  L E++    + GY     + L+DVE+ +K+  +Y HSEKLA+ FGL++     
Sbjct: 879 ADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTV 938

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I V KNLR+C DCH+  +F+SKI +R IIVRD  RFHHF  G CSC  YW
Sbjct: 939 PIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 286/559 (51%), Gaps = 8/559 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +   L    ++HG ++  GF ++  + N LV +Y   G+     ++F+ +P RS
Sbjct: 16  LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
           V SW+ + S ++        +  F  M+   + P E S +S++ AC+G    +    +IH
Sbjct: 76  VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIH 135

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              I  G       +N L+ +YAK G +  A  VF ++   D VSW A+I+G   + + +
Sbjct: 136 ARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEE 195

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ LF +M ++ I P  + ++S L  C  ++L ++G QLH  + K     +  V   LV
Sbjct: 196 EAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALV 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            +Y++  +   A  +F  M  K+ +++N +ISG  Q G    A  LF  M R+ +  D  
Sbjct: 256 TLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCV 315

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++++L + AS  A+   +Q+H+  +K    SD  +  +L+D Y  C  ++ A ++F  +
Sbjct: 316 TVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++V    M+ A+ +     E+ +++ +MQ + + P+ F   S+L  C ++ A + G+
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  +IK GF  + +  + L++MYAK G +D A      + +  +VSW+A+I G AQH 
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              EAL+ F +ML  G+  ++I   S + AC  AG+  +A +    +  +  +    E  
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISAC--AGI--QALNQGRQIHAQSYVSGYSEDL 551

Query: 540 A---CMIDILGRAGKFQEA 555
           +    ++ +  R G+ +EA
Sbjct: 552 SIGNALVSLYARCGRIKEA 570


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/806 (38%), Positives = 478/806 (59%), Gaps = 36/806 (4%)

Query: 2    LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            L+ C + +    G QVH  ++  GF  D FV N+L+ MYAKC +     ++FD + ER+ 
Sbjct: 283  LRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ 342

Query: 62   VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            V+WNS+ S         +A+  F  M  SG + N F+L S++ A AG  D   GR++HG+
Sbjct: 343  VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGH 402

Query: 122  SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             ++   +SD+   +ALVDMY+K G +E+A  VF+ +   + VS+NA++AG V     + A
Sbjct: 403  LVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEA 462

Query: 182  LKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+L+  M+S + I P+ FT+T+ L  CA       GRQ+H  LI+  I  + IV   LV 
Sbjct: 463  LELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVH 522

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY++CG ++ A+ IF+ M E+N  +WN +I G+ QNG   EA  LF  M   G+  D  +
Sbjct: 523  MYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFS 582

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            LS++L S  S       +++H   V+   E +  +   L+D Y KCG ++ A K++ ++ 
Sbjct: 583  LSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTI 642

Query: 361  AVDLVACTSMITA-------------------------------YAQFGLGEEALKLYLE 389
              D++    M++A                               YA  GL +E+   +LE
Sbjct: 643  KKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702

Query: 390  MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCG 448
            M + +I  D     +++N C++L A E G Q+H  IIK GF++       +LV+MY+KCG
Sbjct: 703  MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762

Query: 449  SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +I  A   F  +  + IVSW+AMI G ++HG  KEAL ++ +M + G+ PN +T +++L 
Sbjct: 763  AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 822

Query: 509  ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
            AC+H GLV E    F SM++ + I+   EHY CM+D+LGRAG+ ++A E V+ MP +   
Sbjct: 823  ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 882

Query: 569  SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            S WGALLGA R++K++++G+ AA+ LF ++P+    +V++SNIYA+AG W  V  +R+ M
Sbjct: 883  STWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMM 942

Query: 629  KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP---MVE 685
            K   +KK+PG+SWIE+  ++  F  G ++H +++EIY  L  ++      GY+P    + 
Sbjct: 943  KMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFIL 1002

Query: 686  TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             ++ D++E E+E+ L  HSE+LA++ GLI+ P  +TIRV KNLRIC DCHT+ +FISKI 
Sbjct: 1003 QNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKIT 1062

Query: 746  SREIIVRDVNRFHHFRNGSCSCGGYW 771
             R II RD NRFHHF NG CSCG YW
Sbjct: 1063 GRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 193/629 (30%), Positives = 323/629 (51%), Gaps = 36/629 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIP 57
           +++ C        G  +H  ++  G++ D ++   ++++YA+ G   D   +R+LF+ +P
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           ER++ +WN++   Y   D   E +  +  M  SG   ++F+  S+I AC    D    R+
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQ 196

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +    +K G + ++F   ALVD YA+ G ++DAV    +IE   +V+WNAVIAG V    
Sbjct: 197 LQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILS 256

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + A  +F +M    + P+ FT+ SAL+ C  +  ++ G+Q+H  LI    K D  VG  
Sbjct: 257 WEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 316

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+DMYAKC   +    +F  M E+N + WN +IS   Q G   +A  LF  M   G   +
Sbjct: 317 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           +  L ++L + A    IG  +++H   V+    SD  + ++L+D Y KCG VE+A ++F+
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYE 416
                + V+  +++  Y Q G  EEAL+LY +MQ  + I PD F  ++LL  CAN     
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDN 496

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QG+Q+H H+I+     +      LV+MY++CG ++ A   F+ + +R   SW++MI G  
Sbjct: 497 QGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQ 556

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHF---ESMEKKFG 531
           Q+G  +EAL++F QM  +G+ P+  +L S+L +C       + +  H+F    +ME++  
Sbjct: 557 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616

Query: 532 IQ-PMQEHYA------------------------CMIDILGRAGKFQEAMELVDTMPFQA 566
           +Q  + + YA                         M+     +G+  +A  L D M  Q 
Sbjct: 617 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME-QR 675

Query: 567 NASVWGALL-GAARIYKNVEVGQHAAEML 594
           N ++W ++L G A      E   H  EML
Sbjct: 676 NTALWNSILAGYANKGLKKESFNHFLEML 704



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 229/420 (54%), Gaps = 4/420 (0%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED---AV 151
           N    SS+I  C  S     G+ IH   I  GY+ D +    ++ +YA+ G L+D   A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F+++   ++ +WN +I      +     L+L+ +M+ S    + FT+ S +KAC  ME
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
                RQL  S++K  +  +  VG  LVD YA+ G MD+A      +   +++ WN VI+
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+++     EA  +F  M + GV  D  T ++ L+   + ++    KQVH+  +   F+ 
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKG 309

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           D ++ N+LID Y KC   E  +K+F E    + V   S+I+A AQFG   +AL L+L MQ
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +     + F   S+L A A L+   +G+++H H+++    SD   G++LV+MY+KCG ++
Sbjct: 370 ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVE 429

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML-EDGVLPNHITLVSVLCAC 510
           +A + F  + +R  VS++A++ G  Q G+ +EAL+++  M  EDG+ P+  T  ++L  C
Sbjct: 430 EAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC 489



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 221/453 (48%), Gaps = 51/453 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C ++++   G Q+H  ++      +  V   LV MY++CG    ++ +F+ + ER+
Sbjct: 485 LLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN 544

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SWNS+   Y      +EA+  FK+M L+GI+P+ FSLSSM+++C    DS  GR++H 
Sbjct: 545 AYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHN 604

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLE-------------------------------D 149
           + ++   + +      LVDMYAK G+++                               D
Sbjct: 605 FIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRAND 664

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F  +E  +   WN+++AG         +   F +M  S+I  ++ T  + +  C+ 
Sbjct: 665 AKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSS 724

Query: 210 MELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           +   E G QLH  +IK   +    ++   LVDMY+KCG++ +AR +F  M  KN+++WN 
Sbjct: 725 LPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNA 784

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG+ ++G   EA  L+  M ++G+  ++ T   +L + +     G+ ++   L + T+
Sbjct: 785 MISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH---TGLVEE--GLRIFTS 839

Query: 329 FESDDYI------VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT--SMITA---YAQF 377
            + D  I         ++D  G+ G +EDA K F E   ++    T  +++ A   +   
Sbjct: 840 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDA-KEFVEKMPIEPEVSTWGALLGACRVHKDM 898

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            +G  A +   E+  +  NP  +V  S + A A
Sbjct: 899 DMGRLAAQRLFELDPQ--NPGPYVIMSNIYAAA 929



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 68/120 (56%), Gaps = 5/120 (4%)

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD- 452
           ++NP  +  SSL+  C + +++++GK +H  +I  G+  D +    ++ +YA+ G +DD 
Sbjct: 68  DVNPLPY--SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125

Query: 453 --ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             A + F E+P+R + +W+ MI   A+     E L+++G+M   G   +  T  SV+ AC
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 317/773 (41%), Positives = 457/773 (59%), Gaps = 3/773 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L A  S   L    +VH   V  G   D  V N+LV MYAK G+  D+R +FD + ER 
Sbjct: 326  ILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERD 385

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG--RKI 118
            + SW  +          +EA   F +M  +G  PN  +  S++NA A +  S L   + +
Sbjct: 386  IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445

Query: 119  HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
            H ++ + G+ SD+   NAL+ MYAK G+++DA  VF  +   D++SWNA++ G   +   
Sbjct: 446  HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505

Query: 179  DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              A  +F QM+   + P+  TY S L      +  E   ++H   ++  + SD  VG   
Sbjct: 506  HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAF 565

Query: 239  VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
            + MY +CGS+D+AR++F  +  +++  WN +I G  Q     EA SLF  M REG   D 
Sbjct: 566  IHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDA 625

Query: 299  TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TT   +L +    +A+   K+VH+ +       D  + N+L+  Y KCG+V+ A ++F +
Sbjct: 626  TTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDD 684

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                ++   T MI   AQ G G +A   +L+M    I PD+    S+L+ACA+  A E  
Sbjct: 685  MVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWV 744

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            K+VH H +  G +SD   GN+LV+MYAKCGSIDDA   F ++ +R + SW+ MIGGLAQH
Sbjct: 745  KEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQH 804

Query: 479  GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
            GRG EAL  F +M  +G  PN  + V+VL AC+HAGLV E +  F SM + +GI+P  EH
Sbjct: 805  GRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEH 864

Query: 539  YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            Y CM+D+LGRAG  +EA   +  MP + + + WGALLGA   Y N+E+ + AA+    ++
Sbjct: 865  YTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLK 924

Query: 599  PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
            P+ +ST+VLLSNIYA+ G W+    VR  M+   ++KEPG SWIEV +++++F VGD SH
Sbjct: 925  PKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSH 984

Query: 659  ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
              SKEIYA+L+++ + L   GYVP     L + ++  KEQ L  HSEKLA+ +GL+ T  
Sbjct: 985  PESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQS 1044

Query: 719  GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
               IRV KNLR+C DCHT+ +FISKI  REI+ RD  RFHHF++G CSCG YW
Sbjct: 1045 KDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 203/628 (32%), Positives = 337/628 (53%), Gaps = 8/628 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  ++D+ L  QVH  ++ +G + + +VAN L+ +Y +CG    +R++FD + +++
Sbjct: 124 ILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKN 183

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  W ++   Y      E+A+  + +M     +PNE +  S++ AC    +   G+KIH 
Sbjct: 184 IYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHA 243

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ G+ SD+    ALV+MY K G++EDA  +F  +   +++SW  +I G   +     
Sbjct: 244 HIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 303

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF QM+     PN +TY S L A A     E  +++H   +   +  D  VG  LV 
Sbjct: 304 AFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVH 363

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+D+AR++F  M E+++ +W ++I G  Q+G   EA SLF  M R G   + TT
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTT 423

Query: 301 LSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             ++L   ++AS  A+   K VH  + +  F SD  I N+LI  Y KCG ++DA  +F  
Sbjct: 424 YLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDG 483

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+++  +M+   AQ G G EA  ++L+MQ   + PDS    SLLN   +  A E  
Sbjct: 484 MCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWV 543

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            +VH H ++ G +SD   G++ ++MY +CGSIDDA   F ++  R + +W+AMIGG AQ 
Sbjct: 544 NEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQ 603

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
             G+EAL +F QM  +G +P+  T +++L A N      E      S     G+  ++  
Sbjct: 604 RCGREALSLFLQMQREGFIPDATTFINILSA-NVDEEALEWVKEVHSHATDAGLVDLRVG 662

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAEMLF-A 596
            A ++    + G  + A ++ D M  + N + W  ++G  A+     +   H  +ML   
Sbjct: 663 NA-LVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG 720

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           I P+ ++T+V + +  AS G  + V +V
Sbjct: 721 IVPD-ATTYVSILSACASTGALEWVKEV 747



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 180/529 (34%), Positives = 285/529 (53%), Gaps = 15/529 (2%)

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           ++AV   K  V  GI  + FS  +++  C    D LL +++H   IK G + +++ AN L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           + +Y + G L+ A  VF  +   +I  W  +I G   + H + A++++ +M+     PN 
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
            TY S LKAC      + G+++H  +I+   +SD  V   LV+MY KCGS+++A++IF  
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M E+N+I+W ++I G    G   EA  LF  M REG   +  T  ++L + AS  A+   
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K+VH+ +V      D  + N+L+  Y K G ++DA  +F   +  D+ + T MI   AQ 
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYEQGKQVHVHIIKFGFMSDTF 435
           G G+EA  L+L+MQ     P+     S+LNA   A+ SA E  K VH H  + GF+SD  
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLR 459

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
            GN+L++MYAKCGSIDDA   F  + DR ++SW+AM+GGLAQ+G G EA  +F QM ++G
Sbjct: 460 IGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEG 519

Query: 496 VLPNHITLVSVL---CACNHAGLVAEA-KHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           ++P+  T +S+L    + +    V E  KH  E+     G+       +  I +  R G 
Sbjct: 520 LVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVET-----GLISDFRVGSAFIHMYIRCGS 574

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
             +A  L D +  + + + W A++G A        G+ A  +   ++ E
Sbjct: 575 IDDARLLFDKLSVR-HVTTWNAMIGGA---AQQRCGREALSLFLQMQRE 619


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/773 (39%), Positives = 481/773 (62%), Gaps = 3/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC   +D+  G ++HG+++  G+DS  FVANSLV MYAKC + + +R+LFD + ER+
Sbjct: 16  VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERN 75

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VVSWNS+ S Y       EA+  F+EM  +G+  N ++L + + AC  S    LG +IH
Sbjct: 76  DVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIH 135

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K     D++ ANALV M+ + G +  A  +F +++  D ++WN++IAG   +   +
Sbjct: 136 AAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYN 195

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+ F  ++ + + P+  +  S L A   +     G+++H   +K  + S+  +G  L+
Sbjct: 196 EALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLI 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KC  +  A ++F  M  K+LI+W  VI+ + QN    EA  L   +  +G+  D  
Sbjct: 256 DMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTM 315

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + + L + +  + +   K+VH  ++K    SD  + N +ID Y  CG++  A ++F+  
Sbjct: 316 MIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESI 374

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ TSMI+ Y   GL  EAL ++  M++  + PDS    S+L+A A+LSA  +GK
Sbjct: 375 KCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGK 434

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  I + GFM +    NSLV+MYA CGS+++A + F     + +V W+ MI     HG
Sbjct: 435 EIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHG 494

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           RGK A+++F  M +  ++P+HIT +++L AC+H+GL+ E K   E+M+ K+ ++P  EHY
Sbjct: 495 RGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHY 554

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+LGRA   +EA   V +M  +  A VW A LGA RI+ N ++G+ AA+ L  ++P
Sbjct: 555 ACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDP 614

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +   ++VL+SN++A++G W +V +VR  MK   LKK PG SWIEV +KV+TF V D+SH 
Sbjct: 615 DSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHP 674

Query: 660 RSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            S +IY KL ++++ L K  GYVP  +  LH+V + EK Q+LY HSE+LA+A+GL++T  
Sbjct: 675 ESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSE 734

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  IR+ KNLR+CVDCHT  + +SK   RE+IVRD +RFHHF +G CSCG +W
Sbjct: 735 GTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 234/421 (55%), Gaps = 2/421 (0%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M + G+  + F+   ++ AC    D   G +IHG  IK GYDS +F AN+LV MYAK  +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 147 LEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +  A  +F  + E  D+VSWN++I+   L+     AL LF++M+ + +  N +T  +AL+
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           AC     K+LG ++H +++K     D  V   LV M+ + G M  A  IF  + EK+ I 
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +I+G  QNG   EA   F  +    +  D+ +L ++L +      +   K++HA ++
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   +S+  I N+LID Y KC  V  A  +F +    DL++ T++I AYAQ     EALK
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L  ++Q + ++ D+ +  S L AC+ L      K+VH + +K G +SD    N ++++YA
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYA 359

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
            CG+I+ A R F  I  + +VSW++MI     +G   EAL +F  M E  V P+ ITLVS
Sbjct: 360 DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVS 419

Query: 506 V 506
           +
Sbjct: 420 I 420



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           DSF    +L AC  +    +G ++H  IIK G+ S  F  NSLV+MYAKC  I  A + F
Sbjct: 9   DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68

Query: 458 SEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             + +R  +VSW+++I   + +G+  EAL +F +M + GV  N  TLV+ L AC
Sbjct: 69  DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC 122


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 302/776 (38%), Positives = 468/776 (60%), Gaps = 39/776 (5%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV------------------ 72
           +  N L+   +K G   D+R+LFD +P++   SWN++ S YV                  
Sbjct: 66  YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCK 125

Query: 73  -----------HCDF--LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
                      +C F    EA   F+ M L G + ++F+L S++  C+  G    G  IH
Sbjct: 126 SSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIH 185

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLHEH 177
           G+ +K G++ ++F    LVDMYAK   + +A  +FK +E    + V W A++ G   +  
Sbjct: 186 GFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGD 245

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              A++ F+ M +  +  N +T+ + L AC+ +  +  G Q+H  ++K    S+  V   
Sbjct: 246 GYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSA 305

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LVDMYAKCG +  A+ +   M + ++++WN ++ G +++G + EA  LF  M+   +  D
Sbjct: 306 LVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKID 365

Query: 298 QTTLSTVLKS--VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             T  +VL    V S       K VH L +KT FE+   + N+L+D Y K G ++ A  +
Sbjct: 366 DYTFPSVLNCCVVGSINP----KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTV 421

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F++    D+++ TS++T YAQ    EE+LK++ +M+   +NPD F+ +S+L+ACA L+  
Sbjct: 422 FEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLL 481

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E GKQVH+  IK G        NSLV MYAKCG +DDAD  F  +  + +++W+A+I G 
Sbjct: 482 EFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGY 541

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQ+G+G+ +L+ +  M+  G  P+ IT + +L AC+HAGLV E + +F+ M K +GI+P 
Sbjct: 542 AQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPG 601

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYACMID+ GR+GK  EA +L+D M  + +A+VW +LL A R+++N+E+ + AA  LF
Sbjct: 602 PEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLF 661

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP  +  +V+LSN+Y+++  W++VAK+R+ MK   + KEPG SW+E+  +V TF   D
Sbjct: 662 ELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDD 721

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           R H R  EIY K+DE+   + +AGYVP +   LHD+++  KE  L +HSEKLAVAFGL+A
Sbjct: 722 RGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLA 781

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            PP A IR+ KNLR+C DCH++ ++IS++ +R II+RD N FHHFR G CSCG YW
Sbjct: 782 APPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 253/484 (52%), Gaps = 10/484 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           VL+ C+S   +  G  +HG VV  GF+ + FV   LV MYAKC    ++  LF  +    
Sbjct: 168 VLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR 227

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++ V W ++ + Y       +AV FF+ M   G+  N+++  +++ AC+       G ++
Sbjct: 228 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 287

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+ +K G+ S+++  +ALVDMYAK G+L++A  + + +E  D+VSWN+++ G V H   
Sbjct: 288 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLE 347

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + AL+LF+ M    +  + +T+ S L  C    +    + +H  +IK   ++  +V   L
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYKLVSNAL 405

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMYAK G MD A  +F  M EK++I+W  +++G+ QN    E+  +F  M   GV  DQ
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ 465

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             ++++L + A    +   KQVH   +K+       + NSL+  Y KCG ++DA  IF  
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D++  T++I  YAQ G G  +LK Y  M      PD      LL AC++    ++G
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEG 585

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGG 474
           ++    + K +G          +++++ + G +D+A +   ++   PD  +  W +++  
Sbjct: 586 RKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATV--WKSLLSA 643

Query: 475 LAQH 478
              H
Sbjct: 644 CRVH 647



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 235/466 (50%), Gaps = 36/466 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC+S      G QVHG +V +GF S+ +V ++LV MYAKCG+  +++ + + + +  
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL   +V     EEA+  FK M    ++ ++++  S++N C     S+  + +HG
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVG--SINPKSVHG 388

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G+++    +NALVDMYAK G+++ A  VF+ +   D++SW +++ G   +  ++ 
Sbjct: 389 LIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEE 448

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +LK+F  M+ + +NP+ F   S L ACA + L E G+Q+H   IK  ++    V   LV 
Sbjct: 449 SLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVA 508

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +D+A  IF  M  K++I W  +I G+ QNG    +   +  M   G   D  T
Sbjct: 509 MYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFIT 568

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L + +           HA                L+D   K  + +   K++    
Sbjct: 569 FIGLLFACS-----------HA---------------GLVDEGRK--YFQQMNKVYGIKP 600

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             +  AC  MI  + + G  +EA +L  +M   ++ PD+ V  SLL+AC      E  ++
Sbjct: 601 GPEHYAC--MIDLFGRSGKLDEAKQLLDQM---DVKPDATVWKSLLSACRVHENLELAER 655

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
              ++ +   M +      L NMY+     +D  +    +  +GIV
Sbjct: 656 AATNLFELEPM-NAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIV 700



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 32/66 (48%)

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
           +H          +  N L+N  +K G ++DA + F ++P +   SW+ MI      GR  
Sbjct: 54  IHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLV 113

Query: 483 EALQMF 488
           EA ++F
Sbjct: 114 EARELF 119


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 305/722 (42%), Positives = 458/722 (63%), Gaps = 5/722 (0%)

Query: 52   LFDAIPERSVVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
            L D  P+  V  WN   S C    D      CF     L+ I  +  +L  ++ A AG+ 
Sbjct: 862  LSDDNPD--VFCWNKKLSECLWAGDNWGAIECFVNMNGLN-IDYDAVTLLVVLAAVAGTD 918

Query: 111  DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
            D  LG+++HG ++K G DSD+  AN+LV+MY+K+G    A  VF D++H D++SWN++I+
Sbjct: 919  DLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMIS 978

Query: 171  GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIK 229
             C      + ++ LF  +    + P+ FT  S L+AC+ + +   + RQ+H   +K    
Sbjct: 979  SCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNI 1038

Query: 230  SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            +D  V   L+D+Y+K G M+EA  +F    + +L  WN ++ G++      +A  LF  +
Sbjct: 1039 ADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLI 1098

Query: 290  YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            ++ G   DQ TL+T  K+      +   KQ+HA ++K  F+SD ++ + ++D Y KCG +
Sbjct: 1099 HKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 1158

Query: 350  EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
             +A  +F   SA D VA TSMI+     G  ++AL++Y  M+   + PD +  ++L+ A 
Sbjct: 1159 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 1218

Query: 410  ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
            + ++A EQG+Q+H ++IK   +SD F G SLV+MYAKCG+I+DA R F ++  R I  W+
Sbjct: 1219 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWN 1278

Query: 470  AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
            AM+ GLAQHG  +EA+ +F  M   G+ P+ ++ + +L AC+HAGL +EA  +  SM   
Sbjct: 1279 AMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPND 1338

Query: 530  FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
            +GI+P  EHY+C++D LGRAG  QEA ++++TMPF+A+AS+  ALLGA RI  +VE G+ 
Sbjct: 1339 YGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKR 1398

Query: 590  AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
             A  LFA+EP  S+ +VLLSNIYA+A  WD+V   R+ MK   +KK+PG SWI+VK+ ++
Sbjct: 1399 VAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLH 1458

Query: 650  TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
             F V DRSH ++  IY K++E+   + + GYVP  E  L DVE+ EKE+ LY+HSEKLA+
Sbjct: 1459 LFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAI 1518

Query: 710  AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
            A+GLI+TP   TIRV KNLR+C DCH + ++ISK+  REI++RD NRFHHFR+G CSCG 
Sbjct: 1519 AYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGD 1578

Query: 770  YW 771
            YW
Sbjct: 1579 YW 1580



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 181/613 (29%), Positives = 307/613 (50%), Gaps = 32/613 (5%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VLK C +   L+    VHG  +  G + D FV+ +LV +Y+KCG   D+R LFD + ER 
Sbjct: 733  VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 792

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VV WN +   YV     +EA   F E   SG+RP+EFS+  ++N  +             
Sbjct: 793  VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS------------- 839

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
               ++ +D   + A+  V  YA   +L D        ++PD+  WN  ++ C+    N  
Sbjct: 840  ---EVNWDEGKWLADQ-VQAYAAKLSLSD--------DNPDVFCWNKKLSECLWAGDNWG 887

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A++ F  M    I+ +  T    L A AG +  ELG+Q+H   +K  + SD  V   LV+
Sbjct: 888  AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY+K G    AR +F+ M   +LI+WN +IS   Q+  + E+ +LF  +  EG+  D  T
Sbjct: 948  MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFT 1007

Query: 301  LSTVLKSVASF-QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            L++VL++ +S    + + +Q+H  ++KT   +D ++  +LID Y K G +E+A  +F+  
Sbjct: 1008 LASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNK 1067

Query: 360  SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +DL    +M+  Y     G++AL+L+  +       D    ++   AC  L   +QGK
Sbjct: 1068 DDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK 1127

Query: 420  QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            Q+H H IK GF SD    + +++MY KCG + +A   F+ I     V+W++MI G   +G
Sbjct: 1128 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 1187

Query: 480  RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
               +AL+++ +M +  V+P+  T  +++ A +    + + +  H   ++      P    
Sbjct: 1188 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG- 1246

Query: 539  YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE--VGQHAAEMLFA 596
               ++D+  + G  ++A  L   M  + N ++W A+L     + N E  V    +     
Sbjct: 1247 -TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304

Query: 597  IEPEKSSTHVLLS 609
            IEP++ S   +LS
Sbjct: 1305 IEPDRVSFIGILS 1317



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 266/530 (50%), Gaps = 37/530 (6%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L+   S  +L LG   H  +V +G   D F++N+L+ MY+KCG+   +R++FD  PER 
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 61   VVSWNSLFSCYV-----HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
            +V+WN++   Y      +    +E +  F+ +  S       +L+ ++  C  SG     
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 116  RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
              +HGY+IK+G + D+F + ALV++Y+K G + DA  +F  +   D+V WN ++ G V  
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 176  EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM---ELKELGRQLHCSLIKMEIKSDP 232
                 A +LF +   S + P+ F+    L   + +   E K L  Q+     K+ +  D 
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD- 865

Query: 233  IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                                         ++  WN  +S  L  G +  A   F  M   
Sbjct: 866  ---------------------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGL 898

Query: 293  GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
             + +D  TL  VL +VA    + + KQVH ++VK+  +SD  + NSL++ Y K G    A
Sbjct: 899  NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 958

Query: 353  VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             ++F +   +DL++  SMI++ AQ  L EE++ L++++    + PD F  +S+L AC++L
Sbjct: 959  REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL 1018

Query: 413  -SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
                   +Q+HVH +K G ++D+F   +L+++Y+K G +++A+  F    D  +  W+AM
Sbjct: 1019 IDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAM 1078

Query: 472  IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
            + G      GK+AL++F  + + G   + ITL +   AC    L+ + K 
Sbjct: 1079 MFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQ 1128



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 40/453 (8%)

Query: 113  LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            LLG+  H   +  G   D F +N L+ MY+K G+L  A  VF      D+V+WNA++   
Sbjct: 638  LLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAY 697

Query: 173  VLH-EHNDW----ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
                + ND      L LF+ +++S  +    T    LK C           +H   IK+ 
Sbjct: 698  AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 757

Query: 228  IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
            ++ D  V   LV++Y+KCG M +AR++F  M E++++ WN+++ G++Q G + EA  LF 
Sbjct: 758  LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 817

Query: 288  WMYREGVGFDQTTLSTVLKSVASF---QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
              +R G+  D+ ++  +L  V+     +   +  QV A + K +   D+  V        
Sbjct: 818  EFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLS 877

Query: 345  KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
            +C                        + A   +G    A++ ++ M    I+ D+     
Sbjct: 878  EC------------------------LWAGDNWG----AIECFVNMNGLNIDYDAVTLLV 909

Query: 405  LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
            +L A A     E GKQVH   +K G  SD    NSLVNMY+K G    A   F+++    
Sbjct: 910  VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969

Query: 465  IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA--GLVAEAKHH 522
            ++SW++MI   AQ    +E++ +F  +L +G+ P+H TL SVL AC+    GL    + H
Sbjct: 970  LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIH 1029

Query: 523  FESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
              ++  K G          +ID+  ++GK +EA
Sbjct: 1030 VHAL--KTGNIADSFVATTLIDVYSKSGKMEEA 1060



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            ++KA +    L  G Q+H  V+     SD FV  SLV MYAKCGN  D+ RLF  +  R+
Sbjct: 1214 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 1273

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG-DSLLGRKIH 119
            +  WN++          EEAV  FK M   GI P+  S   +++AC+ +G  S     +H
Sbjct: 1274 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 1333

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
                  G + ++   + LVD   + G +++A  V + +      S N  + G 
Sbjct: 1334 SMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 1386


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/789 (39%), Positives = 476/789 (60%), Gaps = 19/789 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +LKA    +D+ LG Q+H  V   G+  D   VAN+LV +Y KCG+F    ++FD I ER
Sbjct: 16  LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 75

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG---SGDSLLGR 116
           + VSWNSL S     +  E A+  F+ M+   + P+ F+L S++ AC+        ++G+
Sbjct: 76  NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 135

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H Y ++ G + + F  N LV MY K+G L  +  +       D+V+WN V++    +E
Sbjct: 136 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 194

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVG 235
               AL+  ++M    + P+ FT +S L AC+ +E+   G++LH   +K   +  +  VG
Sbjct: 195 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 254

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GV 294
             LVDMY  C  +   R +F  M ++ +  WN +I+G+ QN  D EA  LF  M    G+
Sbjct: 255 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 314

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             + TT++ V+ +     A    + +H   VK   + D ++ N+L+D Y + G ++ A++
Sbjct: 315 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 374

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-----------INPDSFVCS 403
           IF +    DLV   +MIT Y      E+AL L  +MQ+ E           + P+S    
Sbjct: 375 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 434

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           ++L +CA LSA  +GK++H + IK    +D   G++LV+MYAKCG +  + + F +IP +
Sbjct: 435 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +++W+ +I     HG G+EA+ +   M+  GV PN +T +SV  AC+H+G+V E    F
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 554

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVWGALLGAARIYK 582
             M+  +G++P  +HYAC++D+LGRAG+ +EA +L++ MP   N A  W +LLGA+RI+ 
Sbjct: 555 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 614

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N+E+G+ AA+ L  +EP  +S +VLL+NIY+SAG+WD   +VRR MK+  ++KEPG SWI
Sbjct: 615 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 674

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E  D+V+ F  GD SH +S+++   L+ + + + K GYVP     LH+VEE EKE LL  
Sbjct: 675 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 734

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFG++ T PG  IRV KNLR+C DCH + +FISKIV REII+RDV RFH F+N
Sbjct: 735 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 794

Query: 763 GSCSCGGYW 771
           G+CSCG YW
Sbjct: 795 GTCSCGDYW 803



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 167/617 (27%), Positives = 303/617 (49%), Gaps = 40/617 (6%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS-ANALVDMYAKVG 145
           M++ GI+P+ ++  +++ A A   D  LG++IH +  K GY  D  + AN LV++Y K G
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +      VF  I   + VSWN++I+     E  + AL+ F+ M    + P+ FT  S + 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 206 ACAGMELKE---LGRQLHC-SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           AC+ + + E   +G+Q+H   L K E+ S   +   LV MY K G +  ++++      +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGR 178

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           +L+ WN V+S   QN   +EA      M  EGV  D+ T+S+VL + +  + +   K++H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238

Query: 322 ALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           A ++K  + + + ++ ++L+D Y  C  V    ++F       +    +MI  Y+Q    
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 298

Query: 381 EEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           +EAL L++ M++   +  +S   + ++ AC    A+ + + +H  ++K G   D F  N+
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 358

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM--LEDGV- 496
           L++MY++ G ID A R F ++ DR +V+W+ MI G       ++AL +  +M  LE  V 
Sbjct: 359 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418

Query: 497 --------LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILG 547
                    PN ITL+++L +C     +A+ K  H  +++            + ++D+  
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYA 476

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHV 606
           + G  Q + ++ D +P Q N   W  ++ A  ++ N   GQ A ++L  +  +      V
Sbjct: 477 KCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQGVKPNEV 532

Query: 607 LLSNIYAS---AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA-RSK 662
              +++A+   +GM D   ++   MK +          +E     Y   V     A R K
Sbjct: 533 TFISVFAACSHSGMVDEGLRIFYVMKPD--------YGVEPSSDHYACVVDLLGRAGRIK 584

Query: 663 EIYAKLDEVSDLLNKAG 679
           E Y  ++ +    NKAG
Sbjct: 585 EAYQLMNMMPRDFNKAG 601


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/789 (39%), Positives = 476/789 (60%), Gaps = 19/789 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +LKA    +D+ LG Q+H  V   G+  D   VAN+LV +Y KCG+F    ++FD I ER
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG---SGDSLLGR 116
           + VSWNSL S     +  E A+  F+ M+   + P+ F+L S++ AC+        ++G+
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H Y ++ G + + F  N LV MY K+G L  +  +       D+V+WN V++    +E
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVG 235
               AL+  ++M    + P+ FT +S L AC+ +E+   G++LH   +K   +  +  VG
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GV 294
             LVDMY  C  +   R +F  M ++ +  WN +I+G+ QN  D EA  LF  M    G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             + TT++ V+ +     A    + +H   VK   + D ++ N+L+D Y + G ++ A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-----------INPDSFVCS 403
           IF +    DLV   +MIT Y      E+AL L  +MQ+ E           + P+S    
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           ++L +CA LSA  +GK++H + IK    +D   G++LV+MYAKCG +  + + F +IP +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +++W+ +I     HG G+EA+ +   M+  GV PN +T +SV  AC+H+G+V E    F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVWGALLGAARIYK 582
             M+  +G++P  +HYAC++D+LGRAG+ +EA +L++ MP   N A  W +LLGA+RI+ 
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N+E+G+ AA+ L  +EP  +S +VLL+NIY+SAG+WD   +VRR MK+  ++KEPG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E  D+V+ F  GD SH +S+++   L+ + + + K GYVP     LH+VEE EKE LL  
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFG++ T PG  IRV KNLR+C DCH + +FISKIV REII+RDV RFH F+N
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881

Query: 763 GSCSCGGYW 771
           G+CSCG YW
Sbjct: 882 GTCSCGDYW 890



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 176/645 (27%), Positives = 315/645 (48%), Gaps = 40/645 (6%)

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           RS   W  L    V  + L EAV  + +M++ GI+P+ ++  +++ A A   D  LG++I
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119

Query: 119 HGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           H +  K GY  D  + AN LV++Y K G+      VF  I   + VSWN++I+     E 
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLHC-SLIKMEIKSDPI 233
            + AL+ F+ M    + P+ FT  S + AC+ + + E   +G+Q+H   L K E+ S   
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--F 237

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   LV MY K G +  ++++      ++L+ WN V+S   QN   +EA      M  EG
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDA 352
           V  D+ T+S+VL + +  + +   K++HA ++K  + + + ++ ++L+D Y  C  V   
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACAN 411
            ++F       +    +MI  Y+Q    +EAL L++ M++   +  +S   + ++ AC  
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
             A+ + + +H  ++K G   D F  N+L++MY++ G ID A R F ++ DR +V+W+ M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477

Query: 472 IGGLAQHGRGKEALQMFGQM--LEDGV---------LPNHITLVSVLCACNHAGLVAEAK 520
           I G       ++AL +  +M  LE  V          PN ITL+++L +C     +A+ K
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537

Query: 521 H-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
             H  +++            + ++D+  + G  Q + ++ D +P Q N   W  ++ A  
Sbjct: 538 EIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594

Query: 580 IYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYAS---AGMWDNVAKVRRFMKDNKLKK 635
           ++ N   GQ A ++L  +  +      V   +++A+   +GM D   ++   MK +    
Sbjct: 595 MHGN---GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDY--- 648

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHA-RSKEIYAKLDEVSDLLNKAG 679
                 +E     Y   V     A R KE Y  ++ +    NKAG
Sbjct: 649 -----GVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/789 (39%), Positives = 476/789 (60%), Gaps = 19/789 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +LKA    +D+ LG Q+H  V   G+  D   VAN+LV +Y KCG+F    ++FD I ER
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG---SGDSLLGR 116
           + VSWNSL S     +  E A+  F+ M+   + P+ F+L S++ AC+        ++G+
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H Y ++ G + + F  N LV MY K+G L  +  +       D+V+WN V++    +E
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVG 235
               AL+  ++M    + P+ FT +S L AC+ +E+   G++LH   +K   +  +  VG
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GV 294
             LVDMY  C  +   R +F  M ++ +  WN +I+G+ QN  D EA  LF  M    G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             + TT++ V+ +     A    + +H   VK   + D ++ N+L+D Y + G ++ A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-----------INPDSFVCS 403
           IF +    DLV   +MIT Y      E+AL L  +MQ+ E           + P+S    
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           ++L +CA LSA  +GK++H + IK    +D   G++LV+MYAKCG +  + + F +IP +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +++W+ +I     HG G+EA+ +   M+  GV PN +T +SV  AC+H+G+V E    F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVWGALLGAARIYK 582
             M+  +G++P  +HYAC++D+LGRAG+ +EA +L++ MP   N A  W +LLGA+RI+ 
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N+E+G+ AA+ L  +EP  +S +VLL+NIY+SAG+WD   +VRR MK+  ++KEPG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E  D+V+ F  GD SH +S+++   L+ + + + K GYVP     LH+VEE EKE LL  
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFG++ T PG  IRV KNLR+C DCH + +FISKIV REII+RDV RFH F+N
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881

Query: 763 GSCSCGGYW 771
           G+CSCG YW
Sbjct: 882 GTCSCGDYW 890



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 176/645 (27%), Positives = 315/645 (48%), Gaps = 40/645 (6%)

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           RS   W  L    V  + L EAV  + +M++ GI+P+ ++  +++ A A   D  LG++I
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119

Query: 119 HGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           H +  K GY  D  + AN LV++Y K G+      VF  I   + VSWN++I+     E 
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLHC-SLIKMEIKSDPI 233
            + AL+ F+ M    + P+ FT  S + AC+ + + E   +G+Q+H   L K E+ S   
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--F 237

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   LV MY K G +  ++++      ++L+ WN V+S   QN   +EA      M  EG
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDA 352
           V  D+ T+S+VL + +  + +   K++HA ++K  + + + ++ ++L+D Y  C  V   
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACAN 411
            ++F       +    +MI  Y+Q    +EAL L++ M++   +  +S   + ++ AC  
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
             A+ + + +H  ++K G   D F  N+L++MY++ G ID A R F ++ DR +V+W+ M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477

Query: 472 IGGLAQHGRGKEALQMFGQM--LEDGV---------LPNHITLVSVLCACNHAGLVAEAK 520
           I G       ++AL +  +M  LE  V          PN ITL+++L +C     +A+ K
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537

Query: 521 H-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
             H  +++            + ++D+  + G  Q + ++ D +P Q N   W  ++ A  
Sbjct: 538 EIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594

Query: 580 IYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYAS---AGMWDNVAKVRRFMKDNKLKK 635
           ++ N   GQ A ++L  +  +      V   +++A+   +GM D   ++   MK +    
Sbjct: 595 MHGN---GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPD---- 647

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHA-RSKEIYAKLDEVSDLLNKAG 679
                 +E     Y   V     A R KE Y  ++ +    NKAG
Sbjct: 648 ----YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 308/773 (39%), Positives = 482/773 (62%), Gaps = 3/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   KD   G +VHG+ +  G+ S  FVANS+V MY KC +   +R+LFD +PE+ 
Sbjct: 222 ILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 281

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VVSWNS+ S Y       EA+  F EM  + + PN ++  + + AC  S     G  IH
Sbjct: 282 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 341

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K  Y  ++F ANAL+ MYA+ G + +A  +F +++  D +SWN++++G V +    
Sbjct: 342 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 401

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+ + +M+ +   P++    S + A A       G Q+H   +K  + SD  VG  LV
Sbjct: 402 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLV 461

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK  SM     IF  MP+K++++W  +I+GH QNG    A  LF  +  EG+  D  
Sbjct: 462 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 521

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            +S++L + +  + I   K++H+  ++    SD  + N ++D YG+CG+V+ A ++F+  
Sbjct: 522 MISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELI 580

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ TSMI+ Y   GL  EAL+L+  M++  + PDS    S+L+A A+LSA ++GK
Sbjct: 581 EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGK 640

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  +I+ GF+ +    ++LV+MYA+CG+++ +   F+ I ++ +V W++MI     HG
Sbjct: 641 EIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHG 700

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+ A+ +F +M ++ + P+HI  V+VL AC+H+GL+ E +   ESM+ ++ ++P  EHY
Sbjct: 701 CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHY 760

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++D+LGRA   +EA + V  M  +  A VW ALLGA +I+ N E+G+ AA+ L  ++P
Sbjct: 761 VCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDP 820

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E    +VL+SN+YA+   W +V +VR  MK + LKK PG SWIEV +KV+TF   D+SH 
Sbjct: 821 ENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHP 880

Query: 660 RSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
           +S EIY+KL ++++ L K  GYV   +  LH+ +E EK Q+LY HSE+LA+A+G++ TP 
Sbjct: 881 QSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPE 940

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GA++R+ KNLR+C DCH   + ISK   RE+++RD NRFHHF+ G CSCG  W
Sbjct: 941 GASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 193/636 (30%), Positives = 337/636 (52%), Gaps = 11/636 (1%)

Query: 1   VLKACTSKKDLFLGLQVHG-IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+ C SKK L  G QVH  ++      +  F++  LV MY KCG  +D+ +LFD +P +
Sbjct: 120 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 179

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++ +WN++   YV       ++  ++EM +SGI  +  +   ++ AC    D   G ++H
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHN 178
           G +IK GY S +F AN++V MY K  +L  A  +F  + E  D+VSWN++I+    +  +
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL+LF +M+ + + PN +T+ +AL+AC      + G  +H +++K     +  V   L
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 359

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MYA+ G M EA  IF+ M + + I+WN ++SG +QNG   EA   +  M   G   D 
Sbjct: 360 IAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDL 419

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             + +++ + A         Q+HA ++K   +SD  + NSL+D Y K   ++    IF +
Sbjct: 420 VAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDK 479

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ T++I  +AQ G    AL+L+ E+Q   I+ D  + SS+L AC+ L      
Sbjct: 480 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 539

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H +II+ G +SD    N +V++Y +CG++D A R F  I  + +VSW++MI     +
Sbjct: 540 KEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 598

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQE 537
           G   EAL++F  M E GV P+ I+LVS+L A      + + K  H   + K F ++    
Sbjct: 599 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLE--GS 656

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
             + ++D+  R G  +++  + + +    +  +W +++ A   Y     G+ A ++   +
Sbjct: 657 LASTLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINA---YGMHGCGRAAIDLFRRM 712

Query: 598 EPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           E E  +  H+    +  +      + + RRF++  K
Sbjct: 713 EDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 748



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 251/489 (51%), Gaps = 11/489 (2%)

Query: 94  PNEFSL----SSMINACAGSGDSLLGRKIHGYSIKL-GYDSDMFSANALVDMYAKVGNLE 148
           P++FSL    SS++  C        G+++H + I      + +F +  LV MY K G L 
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA  +F  + H  I +WNA+I   V +     +L+L+++M+ S I  +  T+   LKAC 
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWN 267
            ++ +  G ++H   IK    S   V   +V MY KC  ++ AR +F  MPEK ++++WN
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +IS +  NG  +EA  LF  M +  +  +  T    L++      I     +HA  +K+
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           ++  + ++ N+LI  Y + G + +A  IF      D ++  SM++ + Q GL  EAL+ Y
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            EM+D    PD     S++ A A       G Q+H + +K G  SD   GNSLV+MYAK 
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 467

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
            S+   D  F ++PD+ +VSW+ +I G AQ+G    AL++F ++  +G+  + + + S+L
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527

Query: 508 CACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
            AC+   L++  K  H   + K      +Q     ++D+ G  G    A  + + + F+ 
Sbjct: 528 LACSGLKLISSVKEIHSYIIRKGLSDLVLQNG---IVDVYGECGNVDYAARMFELIEFKD 584

Query: 567 NASVWGALL 575
             S W +++
Sbjct: 585 VVS-WTSMI 592


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 308/773 (39%), Positives = 482/773 (62%), Gaps = 3/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   KD   G +VHG+ +  G+ S  FVANS+V MY KC +   +R+LFD +PE+ 
Sbjct: 186 ILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 245

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VVSWNS+ S Y       EA+  F EM  + + PN ++  + + AC  S     G  IH
Sbjct: 246 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 305

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K  Y  ++F ANAL+ MYA+ G + +A  +F +++  D +SWN++++G V +    
Sbjct: 306 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 365

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+ + +M+ +   P++    S + A A       G Q+H   +K  + SD  VG  LV
Sbjct: 366 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLV 425

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK  SM     IF  MP+K++++W  +I+GH QNG    A  LF  +  EG+  D  
Sbjct: 426 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 485

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            +S++L + +  + I   K++H+  ++    SD  + N ++D YG+CG+V+ A ++F+  
Sbjct: 486 MISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELI 544

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ TSMI+ Y   GL  EAL+L+  M++  + PDS    S+L+A A+LSA ++GK
Sbjct: 545 EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGK 604

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  +I+ GF+ +    ++LV+MYA+CG+++ +   F+ I ++ +V W++MI     HG
Sbjct: 605 EIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHG 664

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+ A+ +F +M ++ + P+HI  V+VL AC+H+GL+ E +   ESM+ ++ ++P  EHY
Sbjct: 665 CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHY 724

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+LGRA   +EA + V  M  +  A VW ALLGA +I+ N E+G+ AA+ L  ++P
Sbjct: 725 ACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDP 784

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E    +VL+SN+Y++   W +V  VR  MK + LKK PG SWIEV +KV+TF   D+SH 
Sbjct: 785 ENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHP 844

Query: 660 RSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
           +S EIY+KL ++++ L K  GYV   +  LH+ +E EK Q+LY HSE+LA+A+G++ TP 
Sbjct: 845 QSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPE 904

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GA++R+ KNLR+C DCH   + ISK   RE+++RD NRFHHF+ G CSCG  W
Sbjct: 905 GASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 193/636 (30%), Positives = 337/636 (52%), Gaps = 11/636 (1%)

Query: 1   VLKACTSKKDLFLGLQVHG-IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+ C SKK L  G QVH  ++      +  F++  LV MY KCG  +D+ +LFD +P +
Sbjct: 84  VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 143

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++ +WN++   YV       ++  ++EM +SGI  +  +   ++ AC    D   G ++H
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHN 178
           G +IK GY S +F AN++V MY K  +L  A  +F  + E  D+VSWN++I+    +  +
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL+LF +M+ + + PN +T+ +AL+AC      + G  +H +++K     +  V   L
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 323

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MYA+ G M EA  IF+ M + + I+WN ++SG +QNG   EA   +  M   G   D 
Sbjct: 324 IAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDL 383

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             + +++ + A         Q+HA ++K   +SD  + NSL+D Y K   ++    IF +
Sbjct: 384 VAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDK 443

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ T++I  +AQ G    AL+L+ E+Q   I+ D  + SS+L AC+ L      
Sbjct: 444 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 503

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H +II+ G +SD    N +V++Y +CG++D A R F  I  + +VSW++MI     +
Sbjct: 504 KEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 562

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQE 537
           G   EAL++F  M E GV P+ I+LVS+L A      + + K  H   + K F ++    
Sbjct: 563 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 622

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
             + ++D+  R G  +++  + + +    +  +W +++ A   Y     G+ A ++   +
Sbjct: 623 --STLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINA---YGMHGCGRAAIDLFRRM 676

Query: 598 EPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           E E  +  H+    +  +      + + RRF++  K
Sbjct: 677 EDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 712



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 251/489 (51%), Gaps = 11/489 (2%)

Query: 94  PNEFSL----SSMINACAGSGDSLLGRKIHGYSIKL-GYDSDMFSANALVDMYAKVGNLE 148
           P++FSL    SS++  C        G+++H + I      + +F +  LV MY K G L 
Sbjct: 72  PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA  +F  + H  I +WNA+I   V +     +L+L+++M+ S I  +  T+   LKAC 
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWN 267
            ++ +  G ++H   IK    S   V   +V MY KC  ++ AR +F  MPEK ++++WN
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +IS +  NG  +EA  LF  M +  +  +  T    L++      I     +HA  +K+
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           ++  + ++ N+LI  Y + G + +A  IF      D ++  SM++ + Q GL  EAL+ Y
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            EM+D    PD     S++ A A       G Q+H + +K G  SD   GNSLV+MYAK 
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
            S+   D  F ++PD+ +VSW+ +I G AQ+G    AL++F ++  +G+  + + + S+L
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 491

Query: 508 CACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
            AC+   L++  K  H   + K      +Q     ++D+ G  G    A  + + + F+ 
Sbjct: 492 LACSGLKLISSVKEIHSYIIRKGLSDLVLQNG---IVDVYGECGNVDYAARMFELIEFKD 548

Query: 567 NASVWGALL 575
             S W +++
Sbjct: 549 VVS-WTSMI 556


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 293/722 (40%), Positives = 446/722 (61%), Gaps = 1/722 (0%)

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
           +LF    +  V  WN   S Y+      EAV  F++M+ S +  +  +   +++  A   
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
              LG++IHG  ++ G+D  +  AN+ ++MY K G++  A  +F  ++  D++SWN VI+
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVIS 371

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE-LGRQLHCSLIKMEIK 229
           GC      + +L+LF  +  S + P+ FT TS L+AC+ +E    +GRQ+H   +K  I 
Sbjct: 372 GCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV 431

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            D  V   L+D+Y+K G M+EA ++FH     +L +WN ++ G   +    EA  LF  M
Sbjct: 432 LDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLM 491

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           +  G   DQ T +   K+      +   KQ+HA+ +K  F  D ++++ ++D Y KCG +
Sbjct: 492 HERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEM 551

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           + A K+F +  + D VA T++I+   + G  E+AL  Y +M+   + PD +  ++L+ AC
Sbjct: 552 KSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKAC 611

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           + L+A EQGKQ+H +I+K     D F   SLV+MYAKCG+I+DA   F  +  R +  W+
Sbjct: 612 SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWN 671

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMI GLAQHG  +EAL  F +M   GV P+ +T + VL AC+H+GL ++A  +F+SM+K 
Sbjct: 672 AMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKT 731

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           +G++P  EHY+C++D L RAG  QEA ++V +MPF+A+A+++  LL A R+  + E G+ 
Sbjct: 732 YGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGER 791

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
            AE LF ++P  S+ +VLLSNIYA+A  W+N    R  MK   +KKEPG SWI++K+KV+
Sbjct: 792 VAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVH 851

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F  GDRSH  +  IY K++ V   + + GYVP  E  L D+EE +KE  L +HSEKLA+
Sbjct: 852 LFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAI 911

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           A+GL+ TPP  T+RV KNLR+C DCH + ++IS +  REI++RD NRFHHFR+G CSCG 
Sbjct: 912 AYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGD 971

Query: 770 YW 771
           YW
Sbjct: 972 YW 973



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 256/463 (55%), Gaps = 2/463 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L    S   L LG Q+HG VV  G+D    VANS + MY K G+   +RR+F  + E  
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
           ++SWN++ S        E ++  F +++ SG+ P++F+++S++ AC+   +S  +GR++H
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             ++K G   D F + AL+D+Y+K G +E+A  +F + +  D+ SWNA++ G  + ++  
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF  M       +  T+ +A KA   +   + G+Q+H  +IKM    D  V  G++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KCG M  AR +F+ +P  + +AW  VISG ++NG + +A   +  M   GV  D+ 
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T +T++K+ +   A+   KQ+HA  +K     D +++ SL+D Y KCG++EDA  +F+  
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +   +    +MI   AQ G  EEAL  + EM+ R + PD      +L+AC++        
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           +    + K +G   +    + LV+  ++ G I +A++  S +P
Sbjct: 723 KNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 282/581 (48%), Gaps = 55/581 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           +L+   +  DL LG + H ++V +G + D +V N+L+ MYAKCG+   +R+LFD  P+  
Sbjct: 19  ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78

Query: 59  RSVVSWNSLFSCYVHCDFL------EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
           R +V++N++ + Y H   L       EA   F+ +  S +     +LS +   C   G  
Sbjct: 79  RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
                + GY++K+G   D+F A ALV++YAK   + +A  +F  +   D+V WN ++   
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           V     D  L LF     S + P+  +  + L                            
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---------------------------- 230

Query: 233 IVGVGLVDMYAKCGSMDEARM----IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            +GVG   ++ +   +++ R     +F    + ++  WN  +S +LQ G   EA   F  
Sbjct: 231 -MGVGKKTVFER--ELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRD 287

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M +  V  D  T   +L  VAS   + + KQ+H   V+  ++    + NS I+ Y K G 
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           V  A ++F +   VDL++  ++I+  A+ GL E +L+L++++    + PD F  +S+L A
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRA 407

Query: 409 CANL-SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           C++L  +Y  G+QVH   +K G + D+F   +L+++Y+K G +++A+  F       + S
Sbjct: 408 CSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLAS 467

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           W+AM+ G       +EAL++F  M E G   + IT  +   A   AG +   +   +  +
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFAN---AAKAAGCLVRLQ---QGKQ 521

Query: 528 KKFGIQPMQEHY-----ACMIDILGRAGKFQEAMELVDTMP 563
               +  M+ HY     + ++D+  + G+ + A ++ + +P
Sbjct: 522 IHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP 562



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 252/537 (46%), Gaps = 45/537 (8%)

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           S + P  FS+  + +A A S D +LG++ H   +  G + D +  N L+ MYAK G+L  
Sbjct: 10  SSLLPQWFSI--LRHAIADS-DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFS 66

Query: 150 AVAVFKDIEHPD--IVSWNAVIAGCV----LH--EHNDWALKLFQQMKSSEINPNMFTYT 201
           A  +F      D  +V++NA++A       LH  E    A  +F+ ++ S +     T +
Sbjct: 67  ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLS 126

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
              K C           L    +K+ ++ D  V   LV++YAK   + EAR++F  MP +
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR 186

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           +++ WN+++  +++ G   E   LF   +R G+  D  ++ T+L        +GV K   
Sbjct: 187 DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGK--- 235

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
               KT FE +       + AY        A K+F      D+      +++Y Q G G 
Sbjct: 236 ----KTVFERE----LEQVRAY--------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGW 279

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EA+  + +M    +  DS     +L+  A+L+  E GKQ+H  +++FG+       NS +
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           NMY K GS++ A R F ++ +  ++SW+ +I G A+ G  + +L++F  +L  G+LP+  
Sbjct: 340 NMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQF 399

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T+ SVL AC+             +   K GI         +ID+  + GK +EA EL+  
Sbjct: 400 TITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA-ELLFH 458

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK--SSTHVLLSNIYASAG 616
                + + W A++    +  N       A  LF++  E+   +  +  +N   +AG
Sbjct: 459 NQDGFDLASWNAMMHGFTVSDNYR----EALRLFSLMHERGEKADQITFANAAKAAG 511


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/770 (39%), Positives = 459/770 (59%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC+    L LG Q+H      G   D FV ++LV +YAKCG    + ++F  +PE++ 
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+WN L + Y     +   +  F  M+   ++ NEF+L++++  CA S +   G+ IH  
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            IK GY+ + F    LVDMY+K G   DA+ VFK I+ PDIV W+A+I        ++ +
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +KLF  M+  +  PN +T  S L A       + G+ +H  + K   ++D  V   LV M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K G + +   ++  M +++LI+WN  +SG    G      ++F  M  EG   +  T 
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L S +    +   +QVHA  +K   + ++++  +LID Y KC ++EDA   F   S 
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DL   T +IT YAQ   GE+AL  + +MQ   + P+ F  +  L+ C++L++ E G+Q+
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  + K G +SD F G++LV+MYAKCG +++A+  F  +  R  ++W+ +I G AQ+G+G
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            +AL  F  ML++G+ P+ +T   +L AC+H GLV E K HF SM + FGI P  +H AC
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           M+DILGR GKF E  + +  M    NA +W  +LGA++++ N+ +G+ AA  LF ++PE+
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            S+++LLSNI+A+ G WD+V +VR  M    +KKEPG SW+E   +V+TF   D SH + 
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQI 879

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           +EI+ KLDE+   L    YVP  E  LH+V E+EK++ L  HSE+LA+ F LI+T     
Sbjct: 880 QEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKK 939

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KNLRIC DCH   + IS I ++EI+VRDV RFHHF+NG+CSC  +W
Sbjct: 940 IRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/575 (30%), Positives = 299/575 (52%), Gaps = 2/575 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C SK+ L +   +HG++V    + D  +  SLV +YAKC     +R +   +P+R 
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW +L    V   F  +++  F+EM   GI PNEF+L++ + AC+      LG+++H 
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + KLG   D+F  +ALVD+YAK G +E A  +F  +   + V+WN ++ G         
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKLF  M   ++  N FT T+ LK CA  +  + G+ +H  +IK   + +  +G GLVD
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG   +A  +F  + + +++ W+ +I+   Q G   E+  LF  M       +Q T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + ++L +  +   +   + +HA   K  FE+D  + N+L+  Y K G V D  K+++   
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  + ++     G+ +  L ++  M +    P+ +   S+L +C+ L     G+Q
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH HIIK     + F   +L++MYAKC  ++DAD AF+ +  R + +W+ +I   AQ  +
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++AL  F QM ++GV PN  TL   L  C+    + E      SM  K G        +
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGS 656

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++D+  + G  +EA  L + +  + +   W  ++
Sbjct: 657 ALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 142/412 (34%), Positives = 228/412 (55%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           SSM+  CA      + + IHG  +K   + D     +LV++YAK      A  V   +  
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VSW A+I G V     + ++ LFQ+M++  I PN FT  + LKAC+     +LG+Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H    K+ +  D  VG  LVD+YAKCG ++ A  +F  MPE+N + WN++++G+ Q G  
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
                LF  M    V  ++ TL+TVLK  A+ + +   + +H+L +K  +E +++I   L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG   DA+ +FK     D+V  +++IT   Q G  EE++KL+  M+  +  P+ 
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQ 415

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           +   SLL+A  N    + G+ +H  + K+GF +D    N+LV MY K G + D  + +  
Sbjct: 416 YTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           + DR ++SW+A + GL   G     L +F  MLE+G +PN  T +S+L +C+
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 262/482 (54%), Gaps = 6/482 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C + K+L  G  +H +++  G++ +EF+   LV MY+KCG  ID+  +F  I +  
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W++L +C       EE++  F  M L    PN++++ S+++A   +G+   G+ IH 
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-- 178
              K G+++D+  +NALV MY K G + D   +++ +   D++SWNA ++G  LH+    
Sbjct: 440 CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG--LHDCGMY 497

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D  L +F  M      PNM+T+ S L +C+ +     GRQ+H  +IK ++  +  V   L
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKC  +++A + F+ +  ++L  W ++I+ + Q     +A + F  M +EGV  ++
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL+  L   +S  ++   +Q+H++  K+   SD ++ ++L+D Y KCG +E+A  +F+ 
Sbjct: 618 FTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEA 677

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D +A  ++I  YAQ G G +AL  +  M D  I+PD    + +L+AC++    E+G
Sbjct: 678 LIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEG 737

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           K+    + + FG          +V++  + G  D+ +    ++   +  + W  ++G   
Sbjct: 738 KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASK 797

Query: 477 QH 478
            H
Sbjct: 798 MH 799



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 198/400 (49%), Gaps = 7/400 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A T+  +L  G  +H  V   GF++D  V+N+LV MY K G   D  +L++++ +R 
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN+  S    C   +  +  F  M+  G  PN ++  S++ +C+   D   GR++H 
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   D + F   AL+DMYAK   LEDA   F  +   D+ +W  +I         + 
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEK 600

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  F+QM+   + PN FT    L  C+ +   E G+QLH  + K    SD  VG  LVD
Sbjct: 601 ALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVD 660

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG M+EA  +F  +  ++ IAWN +I G+ QNG   +A + F  M  EG+  D  T
Sbjct: 661 MYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVT 720

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI--VNSLIDAYGKCG---HVEDAVKI 355
            + +L S  S Q +    + H  S+   F     +     ++D  G+ G    +ED ++ 
Sbjct: 721 FTGIL-SACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQK 779

Query: 356 FKES-SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
            + S +A+           +    LGE+A     E+Q  E
Sbjct: 780 MQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 172/315 (54%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y+S L+ CA      + + +H  ++K  I  D  + V LV++YAKC     AR++   MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           ++++++W  +I G +  G   ++  LF  M  EG+  ++ TL+T LK+ +   A+ + KQ
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HA + K     D ++ ++L+D Y KCG +E A K+F      + V    ++  YAQ G 
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
               LKL+  M + ++  + F  +++L  CAN    +QG+ +H  IIK G+  + F G  
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           LV+MY+KCG   DA   F  I    IV WSA+I  L Q G+ +E++++F  M     LPN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 500 HITLVSVLCACNHAG 514
             T+ S+L A  + G
Sbjct: 415 QYTICSLLSAATNTG 429


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/771 (40%), Positives = 468/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C    D   G  +H  ++  G   D F  N L+  Y K  +  D+ +LFD +P+R+
Sbjct: 50  LLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRN 109

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+ +L   Y  C    EA+  F  +   G   N F  S+++     +  + LG  +H 
Sbjct: 110 TVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHA 169

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              KLG+DSD F   AL+D Y+  G  E A  VF  IE+ D+VSW  ++A  V +E  + 
Sbjct: 170 CVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEE 229

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +LKLF +M+     PN FT+ S LKAC G+E+  +G+ +H    K     +  VGV L+D
Sbjct: 230 SLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELID 289

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y K G +D+A  +F  MP+ ++I W+ +I+ + Q+    EA  +F  M R  V  +Q T
Sbjct: 290 LYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFT 349

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L+++L++ AS   + +  Q+H   VK   + + ++ N+L+D Y KCG +E+++++F ES 
Sbjct: 350 LASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V+  ++I  Y Q G GE+AL L+ +M + ++       SS+L ACA ++A E G Q
Sbjct: 410 NCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQ 469

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   +K  +  +T  GN+L++MYAKCG+I DA   F  + +   VSW+AMI G + HG 
Sbjct: 470 IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGL 529

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             EAL+ F  MLE    P+ +T V +L AC++AGL+   + +F+SM +++ I+P  EHY 
Sbjct: 530 YGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYT 589

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+ +LGR+G   +A +LV  +PF+ +  VW ALL A  I+ +VE+G+ +A+ +  IEPE
Sbjct: 590 CMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPE 649

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             +THVLLSNIYA+A  W NVA +R  MK   ++KEPG+SWIE + +V+ F+VGD SH  
Sbjct: 650 DEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPD 709

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           +K I   L+ ++      GYVP   + L DVE+ +KEQ L+ HSE+LA+A+GLI TP  +
Sbjct: 710 TKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSIS 769

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +R+ KNLRIC DCH + + ISKIV R+II+RD+NRFHHF  G CSCG YW
Sbjct: 770 PLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 260/490 (53%), Gaps = 8/490 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           N +   S++ +C  +GD   G+ +H   IK G   D+F+ N L++ Y K  +L DA  +F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS--EINPNMFTYTSALKACAGMEL 212
            ++   + VS+  +I G         A+ LF +++    E+NP  F +++ LK     E 
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNP--FVFSTVLKLLVSAEW 160

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            +LG  +H  + K+   SD  VG  L+D Y+ CG  + AR +F  +  K++++W  +++ 
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           +++N    E+  LF  M   G   +  T ++VLK+    +   V K VH  + KT++  +
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++   LID Y K G V+DA+++F+E    D++  + MI  YAQ    EEA++++  M+ 
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P+ F  +SLL ACA+L   + G Q+H H++K G   + F  N+L++MYAKCG +++
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           + + FSE P+   VSW+ +I G  Q G G++AL +F  MLE  V    +T  SVL AC  
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRAC-- 458

Query: 513 AGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           AG+ A E      S+  K            +ID+  + G  ++A  LV  M  + +   W
Sbjct: 459 AGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSW 517

Query: 572 GALLGAARIY 581
            A++    ++
Sbjct: 518 NAMISGYSVH 527


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/762 (39%), Positives = 464/762 (60%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           D   G  +H  ++  G   D F  N L+  Y +  +  D+ +LFD +P+ + +S+ +L  
Sbjct: 50  DPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQ 109

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            Y       +A+ F   +   G   N F  ++++        + L   +H    KLG+ +
Sbjct: 110 GYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHA 169

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D F   AL+D Y+  GN++ A  VF DI   D+VSW  ++A    +   + +L+LF QM+
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                PN FT + ALK+C G+E   +G+ +H   +K     D  VG+ L+++YAK G + 
Sbjct: 230 IMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEII 289

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A+ +F  MP+ +LI W+++I+ + Q+    EA  LF  M +  V  +  T ++VL++ A
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  ++ + KQ+H+  +K    S+ ++ N+++D Y KCG +E+++K+F+E    + V   +
Sbjct: 350 SSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNT 409

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I  Y Q G GE A+ L+  M + ++ P     SS+L A A+L+A E G Q+H   IK  
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM 469

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           +  DT   NSL++MYAKCG I+DA   F ++  R  VSW+AMI G + HG   EAL +F 
Sbjct: 470 YNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFD 529

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            M      PN +T V VL AC++AGL+ + + HFESM K + I+P  EHY CM+ +LGR 
Sbjct: 530 MMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRL 589

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G+F EAM+L+  + +Q +  VW ALLGA  I+K V++G+  A+ +  +EP   +THVLLS
Sbjct: 590 GRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLS 649

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           N+YA+AG WDNVA VR++M+  K++KEPG+SW+E +  V+ F+VGD SH   K I A L+
Sbjct: 650 NMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLE 709

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            ++     AGYVP     L DV++ EKE+ L+ HSE+LA+A+GLI TP   +IR+ KNLR
Sbjct: 710 WLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLR 769

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IC+DCHT  + ISK+V REI++RD+NRFHHFR+G CSCG YW
Sbjct: 770 ICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 259/488 (53%), Gaps = 14/488 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK   S     L   +H  V   G  +D FV  +L+  Y+  GN   +R +FD I  + 
Sbjct: 142 LLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKD 201

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + +CY    F EE++  F +M + G +PN F++S  + +C G     +G+ +HG
Sbjct: 202 MVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHG 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K  YD D+F   AL+++YAK G + DA  +F+++   D++ W+ +IA     + +  
Sbjct: 262 CALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKE 321

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M+ + + PN FT+ S L+ACA     +LG+Q+H  ++K  + S+  V   ++D
Sbjct: 322 ALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMD 381

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG ++ +  +F  +P++N + WN +I G++Q G    A +LF  M    +   + T
Sbjct: 382 VYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVT 441

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+VL++ AS  A+    Q+H+L++KT +  D  + NSLID Y KCG + DA   F + +
Sbjct: 442 YSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN 501

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+  +MI  Y+  G+  EAL L+  MQ  +  P+      +L+AC+N     +G Q
Sbjct: 502 KRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-Q 560

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYA-------KCGSIDDADRAFSEIP-DRGIVSWSAMI 472
            H     F  MS  +     +  Y        + G  D+A +   EI     ++ W A++
Sbjct: 561 AH-----FESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALL 615

Query: 473 GGLAQHGR 480
           G    H +
Sbjct: 616 GACVIHKK 623


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/771 (39%), Positives = 465/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT       G  VH  V   G  S+  V N+L+ +Y + G+   + R+F  +P   
Sbjct: 149 VLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F+EM LSG  P+  +++S++ ACA  GD   G+++H 
Sbjct: 209 RVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHS 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K G   D     +L+D+Y K G + +A+ +FK  +  ++V WN ++           
Sbjct: 269 YLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAK 328

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +  LF QM ++ + PN FTY   L+ C       LG Q+H   IK   +SD  V   L+D
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLID 388

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+K G +D+AR I  ++  K++++W  +I+G++Q+    EA   F  M   G+  D   
Sbjct: 389 MYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIG 448

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++ + + A  +A+   +Q+H+    + + +D  I N+L++ Y +CG  ++A  +F+   
Sbjct: 449 LASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE 508

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D +    M++ +AQ GL EEAL+++++M    +  + F   S ++A ANL+  +QGKQ
Sbjct: 509 HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQ 568

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK G  S+T   N+L+++Y KCGSI+DA   F E+ +R  VSW+ +I   +QHG 
Sbjct: 569 IHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGW 628

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL +F QM ++G+ PN +T + VL AC+H GLV E   +F+SM  + GI P  +HYA
Sbjct: 629 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYA 688

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++DILGRAG+   A + V+ MP  ANA VW  LL A R++KN+E+G+ AA+ L  +EP 
Sbjct: 689 CVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPH 748

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+++VLLSN YA  G W     VR+ MKD  ++KEPG SWIEVK+ V+ F VGDR H  
Sbjct: 749 DSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           + +IY  L ++ D L K GY+       H+ E+ +K+   + HSEKLAVAFGL++ PP  
Sbjct: 809 AHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSM 868

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +RV KNLR+C DCHT  +F S+++ REI++RDV RFHHF NG+CSCG +W
Sbjct: 869 PLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/539 (32%), Positives = 285/539 (52%), Gaps = 1/539 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H   +  G   D    N L+ +YAK G    +RR+F+ +  R  VSW ++ S Y     
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
            EEAV  + +M  SG+ P  + LSS+++AC  +     GR +H    K G  S+    NA
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ +Y + G+L  A  VF ++ + D V++N +I+      + + AL++F++M+ S   P+
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T  S L ACA +     G+QLH  L+K  +  D I+   L+D+Y KCG + EA  IF 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
                N++ WN+++  + Q     ++  LF  M   GV  ++ T   +L++      I +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +Q+H LS+KT FESD Y+   LID Y K G ++ A +I +   A D+V+ TSMI  Y Q
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
               +EAL+ + +MQ   I PD+   +S ++ACA + A  QG+Q+H  +   G+ +D   
Sbjct: 424 HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI 483

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            N+LVN+YA+CG   +A   F  I  +  ++W+ M+ G AQ G  +EAL++F +M + GV
Sbjct: 484 WNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             N  T VS + A  +   + + K    +   K G     E    +I + G+ G  ++A
Sbjct: 544 KYNVFTFVSSISASANLADIKQGK-QIHATVIKTGCTSETEVANALISLYGKCGSIEDA 601


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 311/788 (39%), Positives = 481/788 (61%), Gaps = 23/788 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI--PE 58
           +LK C   K+  LG  +H  +  +    D  + NSL+ +Y+K  + I +  +F ++   +
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRK 117
           R VVS++S+ SC+ +     +AV  F +++L  G+ PNE+  +++I AC   G    G  
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177

Query: 118 IHGYSIKLGY-DSDMFSANALVDMYAK---VGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           + G+ +K GY DS +     L+DM+ K   + +LE A  VF  +   ++V+W  +I    
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            + +ND A+ LF +M  SS   P+ FT T  +  CA ++   LG++LH  +I+  +  D 
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG--DMEAASLFPWMY 290
            VG  LVDMYAKCG + EAR +F  M E N+++W  +++G+++ GG  + EA  +F  M 
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357

Query: 291 REG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            +G V  +  T S VLK+ AS       +QVH  ++K    + D + N L+  Y K G +
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRM 417

Query: 350 EDAVKIFKESSAVDLVACTSMI-TAYAQFGLGEEALKLYLEMQDREIN-----PDSFVCS 403
           E A K F      +LV+ T +  T    F L  E      +  DRE+        SF  +
Sbjct: 418 ESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSE------QDLDREVEYVGSGVSSFTYA 471

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           SLL+  A +    +G+Q+H  ++K GF +D    N+L++MY+KCG+ + A + F+++ D 
Sbjct: 472 SLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDC 531

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +++W+++I G A+HG   +AL++F  MLE GV PN +T ++VL AC+H GL+ EA  HF
Sbjct: 532 NVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHF 591

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN 583
            SM    GI P  EHYACM+D+LGR+G   EA+E +++MPF A+A VW   LG+ R+++N
Sbjct: 592 TSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRN 651

Query: 584 VEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
            ++G+HAA+M+   EP   +T++LLSN+YA+ G W++VA +R+ MK  ++ KE G SWIE
Sbjct: 652 TKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIE 711

Query: 644 VKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHH 703
           V+++V+ F VGD  H ++++IY KLDE++  +   GYVP  +  LHDVE+ +KEQ L+ H
Sbjct: 712 VENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQH 771

Query: 704 SEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNG 763
           SEKLAVAF LI+TP    IRV KNLR+C DCHT+ ++IS +  REI+VRD NRFHH ++G
Sbjct: 772 SEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDG 831

Query: 764 SCSCGGYW 771
           +CSC  YW
Sbjct: 832 TCSCNDYW 839



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 204/380 (53%), Gaps = 13/380 (3%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           S ++  C  + ++ LG+ +H          D    N+L+ +Y+K  +   A ++F+ +E+
Sbjct: 56  SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115

Query: 160 P--DIVSWNAVIAGCVLHEHNDW-ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKEL 215
              D+VS++++I+ C  +  N   A+++F Q+   + + PN + +T+ ++AC      + 
Sbjct: 116 SKRDVVSYSSIIS-CFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKT 174

Query: 216 GRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCGS---MDEARMIFHLMPEKNLIAWNIVIS 271
           G  L   ++K     S   VG  L+DM+ K  S   ++ AR +F  M EKN++ W ++I+
Sbjct: 175 GLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMIT 234

Query: 272 GHLQNGGDMEAASLFPWMY-REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
              Q G + EA  LF  M    G   D+ TL+ ++   A  Q + + K++H+  +++   
Sbjct: 235 RLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLV 294

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG--EEALKLYL 388
            D  +  SL+D Y KCG V++A K+F      ++++ T+++  Y + G G   EA++++ 
Sbjct: 295 LDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFS 354

Query: 389 EMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            M  +  + P+ F  S +L ACA+L  ++ G+QVH   IK G  +    GN LV++YAK 
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKS 414

Query: 448 GSIDDADRAFSEIPDRGIVS 467
           G ++ A + F  + ++ +VS
Sbjct: 415 GRMESARKCFDVLFEKNLVS 434



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 193/388 (49%), Gaps = 19/388 (4%)

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           N  + T +  LK C   +   LG+ LH  L    +  D ++   L+ +Y+K      A  
Sbjct: 49  NNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFS 108

Query: 254 IFHLM--PEKNLIAWNIVISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSV-- 308
           IF  M   ++++++++ +IS    N   ++A  +F   + ++GV  ++   + V+++   
Sbjct: 109 IFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLK 168

Query: 309 ASFQAIGVCKQVHALSVKTA-FESDDYIVNSLIDAYGK---CGHVEDAVKIFKESSAVDL 364
             F   G+C  +    +KT  F+S   +   LID + K      +E A K+F +    ++
Sbjct: 169 GGFFKTGLC--LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNV 226

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           V  T MIT  AQ+G  +EA+ L+LEM       PD F  + L++ CA +     GK++H 
Sbjct: 227 VTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHS 286

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG-- 481
            +I+ G + D   G SLV+MYAKCG + +A + F  + +  ++SW+A++ G  + G G  
Sbjct: 287 WVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYE 346

Query: 482 KEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHY 539
           +EA++MF  M L+ GV PN  T   VL AC  A L   +          K G+  +    
Sbjct: 347 REAMRMFSNMLLQGGVAPNCFTFSGVLKAC--ASLPDFDFGEQVHGQTIKLGLSAIDCVG 404

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQAN 567
             ++ +  ++G+ + A +  D + F+ N
Sbjct: 405 NGLVSVYAKSGRMESARKCFDVL-FEKN 431


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/778 (39%), Positives = 481/778 (61%), Gaps = 9/778 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           +LKAC    +L LG  +H  ++ +G   D  + NSL+ +Y+KCG++ ++  +F  +   +
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG---IRPNEFSLSSMINACAGSGDSLLG 115
           R +VSW+++ SC+ +      A+  F  M+      I PNE+  ++++ +C+       G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 116 RKIHGYSIKLGY-DSDMFSANALVDMYAKVG-NLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
             I  + +K GY DS +    AL+DM+ K G +++ A  VF  ++H ++V+W  +I    
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                D A+ LF ++  SE  P+ FT TS L AC  +E   LG+QLH  +I+  + SD  
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  LVDMYAK  +++ +R IF+ M   N+++W  +ISG++Q+  + EA  LF  M    
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  +  T S+VLK+ AS    G+ KQ+H  ++K    + + + NSLI+ Y + G +E A 
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F      +L++  +   A A+    +E+    +E      +P ++ C  LL+  A + 
Sbjct: 405 KAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYAC--LLSGAACIG 462

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
              +G+Q+H  I+K GF ++    N+L++MY+KCG+ + A + F+++  R +++W+++I 
Sbjct: 463 TIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIIS 522

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G A+HG   +AL++F +MLE GV PN +T ++VL AC+H GL+ EA  HF SM     I 
Sbjct: 523 GFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSIS 582

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHYACM+D+LGR+G   EA+E +++MPF A+A VW   LG+ R+++N ++G+HAA+ 
Sbjct: 583 PRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKK 642

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +   EP   +T++LLSN+YAS G WD+VA +R+ MK  KL KE G SWIEV ++V+ F V
Sbjct: 643 ILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHV 702

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD SH ++++IY +LDE++  +   GY+P  +  LHDVE+ +KEQ L+ HSEK+AVA+ L
Sbjct: 703 GDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYAL 762

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I+TP    IRV KNLR+C DCHT+ ++IS +  REI+VRD NRFHH ++G CSC  YW
Sbjct: 763 ISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 261/515 (50%), Gaps = 24/515 (4%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           S ++ AC  SG+  LG+ +H   I  G   D    N+L+ +Y+K G+ E+A+++F+++ H
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 160 --PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN---PNMFTYTSALKACAGMELKE 214
              D+VSW+A+I+    +     AL  F  M     N   PN + +T+ L++C+      
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 215 LGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCG-SMDEARMIFHLMPEKNLIAWNIVISG 272
            G  +   L+K     S   VG  L+DM+ K G  +  ARM+F  M  KNL+ W ++I+ 
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q G   +A  LF  +       D+ TL+++L +    +   + KQ+H+  +++   SD
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +L+D Y K   VE++ KIF      ++++ T++I+ Y Q    +EA+KL+  M  
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P+ F  SS+L ACA+L  +  GKQ+H   IK G  +    GNSL+NMYA+ G+++ 
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMEC 402

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A +AF+ + ++ ++S++      A+     E+     ++   GV  +  T   +L     
Sbjct: 403 ARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAAC 460

Query: 513 AGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            G + + +  H   ++  FG      +   +I +  + G  + A+++ + M ++ N   W
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINN--ALISMYSKCGNKEAALQVFNDMGYR-NVITW 517

Query: 572 GALL-GAAR----------IYKNVEVGQHAAEMLF 595
            +++ G A+           Y+ +E+G    E+ +
Sbjct: 518 TSIISGFAKHGFATKALELFYEMLEIGVKPNEVTY 552



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           E+L+  +   D          S LL AC      E GK +H  +I  G   D+   NSL+
Sbjct: 22  ESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLI 81

Query: 442 NMYAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE---DGV 496
            +Y+KCG  ++A   F  +    R +VSWSA+I   A +     AL  F  ML+   + +
Sbjct: 82  TLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNII 141

Query: 497 LPNHITLVSVLCACNH 512
            PN     ++L +C++
Sbjct: 142 YPNEYCFTALLRSCSN 157


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 319/775 (41%), Positives = 474/775 (61%), Gaps = 9/775 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++K C S  D  LG Q+H + V  G D  D  V  SLV MY    + +D R++F+ + +R
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W SL + Y+    L + +  F  M   G+ PN F+ SS+++  A  G   LG+ +H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             SIK G  S +F  N+L++MYAK G +E+A  VF  +E  D+VSWN ++AG VL+  + 
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF   +SS       TY++ +  CA ++   L RQLH S++K    S   V   L+
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALM 300

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D Y K G +D+A  +F LM   +N+++W  +I G +QNG    AA+LF  M  +GV  + 
Sbjct: 301 DAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPND 360

Query: 299 TTLSTVLK-SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T ST+L  S ASF       Q+HA  +KT +E    +  +L+ +Y K    E+A+ IFK
Sbjct: 361 LTYSTILTVSEASFP-----PQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFK 415

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YE 416
                D+V+ ++M+T YAQ G    A   +++M    + P+ F  SS ++ACA+ +A  +
Sbjct: 416 MIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVD 475

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+Q H   IK          ++LV+MYA+ GSI++A   F    DR ++SW++M+ G A
Sbjct: 476 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYA 535

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           QHG  ++AL +F QM  +G+  + +T +SV+  C HAGLV E + +F+ M + +GI P  
Sbjct: 536 QHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTM 595

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +HYACM+D+  RAGK  E M L++ MPF A  ++W ALLGA R++KNVE+G+ AAE L +
Sbjct: 596 DHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLS 655

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP  S+T+VLLSNIY++AG W    +VR+ M   K++KE G SWI++K+KV+ F   D+
Sbjct: 656 LEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDK 715

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  S++IYAKL  ++  L + GY P      HDV E +KE +L  HSE+LA+AFGLIAT
Sbjct: 716 SHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIAT 775

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PP A + + KNLR+  D HT  + +S+I  REI++RD  RFHHF++G CSCG +W
Sbjct: 776 PPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 233/460 (50%), Gaps = 6/460 (1%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKD 156
           +L  +I  C    D +LG+++H   ++ G+D  D+    +LVDMY    ++ D   VF+ 
Sbjct: 57  ALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEG 116

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           +   ++V+W +++ G +        + LF +M++  + PN FT++S L   A   + +LG
Sbjct: 117 MLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG 176

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H   IK    S   V   L++MYAKCG ++EAR++F  M  +++++WN +++G + N
Sbjct: 177 QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLN 236

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G D+EA  LF           ++T STV+   A+ + +G+ +Q+H+  +K  F S   ++
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM 296

Query: 337 NSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +L+DAY K G ++ A+ +F   S + ++V+ T+MI    Q G    A  L+  M++  +
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            P+    S++L     +S      Q+H  +IK  +      G +L+  Y+K  S ++A  
Sbjct: 357 APNDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALS 412

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F  I  + +VSWSAM+   AQ G    A   F +M   G+ PN  T+ S + AC     
Sbjct: 413 IFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAA 472

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             +    F ++  K          + ++ +  R G  + A
Sbjct: 473 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 302/774 (39%), Positives = 469/774 (60%), Gaps = 4/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA--IPE 58
           VLKAC + K+  LG ++HG+ V  G+    FV N+L+ MYAKCG+   +R LFD+  + +
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK 213

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              VSWNS+ S +V      EA+  F+ M   G+  N ++  S + AC G     +GR I
Sbjct: 214 DDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGI 273

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K  + +D++ +NAL+ MYA  G +EDA  VFK +   D VSWN +++G V ++  
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY 333

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+  FQ M+ S   P+  +  + + A         G ++H   IK  I S+  +G  L
Sbjct: 334 SDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSL 393

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY KC  +      F  MPEK+LI+W  +I+G+ QN   ++A +L   +  E +  D 
Sbjct: 394 IDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP 453

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             + ++L + +  ++  + K++H   +K    +D  I N++++ YG+   V+ A  +F+ 
Sbjct: 454 MMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFES 512

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            ++ D+V+ TSMIT     GL  EAL+L+  + +  I PD     S+L A A LS+ ++G
Sbjct: 513 INSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKG 572

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H  +I+ GF  +    NSLV+MYA+CG++++A   F+ +  R ++ W++MI     H
Sbjct: 573 KEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMH 632

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GK+A+ +F +M ++ VLP+HIT +++L AC+H+GLV E K HFE M+ ++ ++P  EH
Sbjct: 633 GCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEH 692

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC++D+L R+   +EA   V  MP + +A VW ALLGA RI+ N ++G+ AA+ L  + 
Sbjct: 693 YACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLN 752

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
            E S  +VL+SN +A+ G W++V +VR  MK NKLKK+PG SWIEV++K++TF   D+SH
Sbjct: 753 TENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSH 812

Query: 659 ARSKEIYAKLDEVSDLLN-KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
            +   IY KL + + LL  K GY    +   HDV E EK Q+LY HSE+LA+ +GL+ T 
Sbjct: 813 PQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTS 872

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G  +R+ KNLRIC DCH  F+  S+I  R ++VRD +RFHHF  G CSCG +W
Sbjct: 873 KGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 183/580 (31%), Positives = 314/580 (54%), Gaps = 8/580 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFT-GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L+ C S K L  G Q+H   + T  +    F+    V MY KCG+F D+ ++FD + ER+
Sbjct: 53  LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +WN++    V      EA+  +KEM + G+  + F+   ++ AC    +  LG +IHG
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHPDIVSWNAVIAGCVLHEHN 178
            ++K GY   +F  NAL+ MYAK G+L  A  +F    +E  D VSWN++I+  V    +
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF++M+   +  N +T+ SAL+AC G    ++GR +H  ++K    +D  V   L
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MYA CG M++A  +F  M  K+ ++WN ++SG +QN    +A + F  M   G   DQ
Sbjct: 293 IAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQ 352

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            ++  ++ +      +    +VHA ++K   +S+ +I NSLID YGKC  V+     F+ 
Sbjct: 353 VSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEY 412

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               DL++ T++I  YAQ     +AL L  ++Q  +++ D  +  S+L AC+ L + +  
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLI 472

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H +++K G ++D    N++VN+Y +   +D A   F  I  + IVSW++MI     +
Sbjct: 473 KEIHGYVLK-GGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHN 531

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQE 537
           G   EAL++F  ++E  + P+ ITLVSVL A      + + K  H   + K F ++ +  
Sbjct: 532 GLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIA 591

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +   ++D+  R G  + A  + + +  Q +  +W +++ A
Sbjct: 592 N--SLVDMYARCGTMENARNIFNYVK-QRDLILWTSMINA 628



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 10/411 (2%)

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGVGLVDMYAKCGSMDEARM 253
           P    Y+ AL+ CA  +    G+QLH   +K +   D + +    V MY KCGS  +A  
Sbjct: 44  PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M E+ +  WN +I   +  G  +EA  L+  M   GV  D  T   VLK+  +F+ 
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES--SAVDLVACTSMI 371
             +  ++H ++VK  +    ++ N+LI  Y KCG +  A  +F        D V+  S+I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
           +A+   G   EAL L+  MQ+  +  +++   S L AC   +  + G+ +H  I+K    
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           +D +  N+L+ MYA CG ++DA+R F  +  +  VSW+ ++ G+ Q+    +A+  F  M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343

Query: 492 LEDGVLPNHITLVSVLCACNH-AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
            + G  P+ +++++++ A    A L+A  + H  ++  K GI         +ID+ G+  
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAI--KHGIDSNMHIGNSLIDMYGKCC 401

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
             +      + MP + +   W  ++     Y   E    A  +L  ++ EK
Sbjct: 402 CVKYMGSAFEYMP-EKDLISWTTIIAG---YAQNECHLDALNLLRKVQLEK 448


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/716 (40%), Positives = 453/716 (63%), Gaps = 4/716 (0%)

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            ++ +WN   + ++H   +  A+  FK ++ S I  +  +L  +++A  G+ D  LG +IH
Sbjct: 858  NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               IK  +   +  +N+L++MY+K G +  A   F +    D++SWN +I+    +    
Sbjct: 918  ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977

Query: 180  WALKLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLHCSLIKMEIKSDPIVGV 236
             A+  F+ +    + P+ FT  S L+AC+  +  E   LG Q+H   IK  I +D  V  
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 237  GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
             L+D+Y+K G MDEA  + H   + +L +WN ++ G++++    +A   F  M+  G+  
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 297  DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            D+ TL+T +K+      +   KQ+ A ++K  F +D ++ + ++D Y KCG + +A+++F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 357  KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
             E S  D VA T+MI+ Y + G  + AL +Y  M+   + PD +  ++L+ A + L+A E
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217

Query: 417  QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            QGKQ+H +++K  +  D F G SLV+MY KCGS+ DA R F ++  R +V W+AM+ GLA
Sbjct: 1218 QGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLA 1277

Query: 477  QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            QHG   EAL +F  M  +G+ P+ +T + VL AC+H+GL +EA  +F++M K +GI P  
Sbjct: 1278 QHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEI 1337

Query: 537  EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
            EHY+C++D LGRAG+ QEA  ++ +MPF+A+AS++ ALLGA R   + E  +  A+ L A
Sbjct: 1338 EHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLA 1397

Query: 597  IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            ++P  SS +VLLSNIYA++  WD+V   R  MK   +KK+PG SWI+VK+KV+ F V DR
Sbjct: 1398 LDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDR 1457

Query: 657  SHARSKEIYAKLDEVSDLLNKAG-YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            SH ++  IY K++++   + + G YVP  +  L DVEE EKE+ LY+HSEKLA+AFGLI+
Sbjct: 1458 SHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLIS 1517

Query: 716  TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            TPP ATIRV KNLR+C DCH++ + ISK+  REI++RD NRFHHFRNG+CSCG YW
Sbjct: 1518 TPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 256/523 (48%), Gaps = 49/523 (9%)

Query: 3    KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
            ++  +  DL LG + H  +V +G   D ++ N+L+ MY+KCG+   +R++FD   +R +V
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 63   SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP----NEFSLS-------SMINACAGSGD 111
            +WNS+ + Y    F + +     E VL G R      EF  S        ++  C  SG 
Sbjct: 679  TWNSILAAYAQ--FADSSY----ENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGF 732

Query: 112  SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
              +   +HGY++K+G++ D+F + ALV++Y K G +  A  +F  +   D V WN ++  
Sbjct: 733  VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792

Query: 172  CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL--IKMEIK 229
             V +   D AL+ F     S   P+                      LHC +  +  ++ 
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFXPDF-------------------SNLHCVIGGVNSDVS 833

Query: 230  SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            ++       V  YA          +F      N+ AWN  ++  L  G  + A   F  +
Sbjct: 834  NNRKRHAEQVKAYAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885

Query: 290  YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             R  +G D  TL  +L +      + + +Q+HAL +K++F     + NSL++ Y K G V
Sbjct: 886  LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945

Query: 350  EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
              A K F  S  +DL++  +MI++YAQ  L  EA+  + ++    + PD F  +S+L AC
Sbjct: 946  YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005

Query: 410  ANLSAYEQ---GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            +     E    G QVHV+ IK G ++D+F   +L+++Y+K G +D+A+       D  + 
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065

Query: 467  SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
            SW+A++ G  +  + ++AL+ F  M E G+  + ITL + + A
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 204/390 (52%), Gaps = 33/390 (8%)

Query: 1    VLKACTSKKD---LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
            VL+AC++  +     LG QVH   +  G  +D FV+ +L+ +Y+K G   ++  L     
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060

Query: 58   ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            +  + SWN++   Y+  +   +A+  F  M   GI  +E +L++ I A     +   G++
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120

Query: 118  IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            I  Y+IKLG+++D++ ++ ++DMY K G++ +A+ +F +I  PD V+W  +I+G + +  
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180

Query: 178  NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             D AL ++  M+ S + P+ +T+ + +KA + +   E G+Q+H +++K++   D  VG  
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240

Query: 238  LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
            LVDMY KCGS+ +A  +F  M  + ++ WN ++ G  Q+G   EA +LF  M   G+  D
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300

Query: 298  QTTLSTVLKSV--------------ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
            + T   VL +               A F+  G+  ++   S              L+DA 
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSC-------------LVDAL 1347

Query: 344  GKCGHVEDAVKIFKESSAVDLVACTSMITA 373
            G+ G +++A  +    +++   A  SM  A
Sbjct: 1348 GRAGRIQEAENVI---ASMPFKASASMYRA 1374



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 207/472 (43%), Gaps = 33/472 (6%)

Query: 111  DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
            D  LG++ H   +  G   D +  N L+ MY+K G+L  A  VF      D+V+WN+++A
Sbjct: 626  DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685

Query: 171  GCVLHEHNDW-----ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
                   + +       +LF  ++    +    T    LK C      ++   +H   +K
Sbjct: 686  AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 226  MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
            +  + D  V   LV++Y K G + +AR++F  MPE++ + WN+++  +++N    EA   
Sbjct: 746  IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 286  FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
            F   +R G   D + L  V+  V S   +   ++ HA  VK               AY  
Sbjct: 806  FSAFHRSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQVK---------------AY-- 846

Query: 346  CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
                  A+K+F      ++ A    +T +   G    A+  +  +    I  DS     +
Sbjct: 847  ------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 406  LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            L+A       + G+Q+H  +IK  F       NSL+NMY+K G +  A++ F   P+  +
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 466  VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA--GLVAEAKHHF 523
            +SW+ MI   AQ+    EA+  F  +L DG+ P+  TL SVL AC+    G         
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 524  ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                 K GI         +ID+  + GK  EA E +    +  + + W A++
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 6/227 (2%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           +S  +   + + K+ HA  V +    D Y+ N+LI  Y KCG +  A ++F +SS  DLV
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 366 ACTSMITAYAQFGLGE-----EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              S++ AYAQF         E  +L+  +++   +      + LL  C      +  + 
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH + +K GF  D F   +LVN+Y K G +  A   F ++P+R  V W+ M+    ++  
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
             EAL+ F      G  P+   L  V+   N + +    K H E ++
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGGVN-SDVSNNRKRHAEQVK 844



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 11/167 (6%)

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GK+ H  I+  G + D +  N+L+ MY+KCGS+  A + F +  DR +V+W++++   AQ
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689

Query: 478 HGRGK-----EALQMFGQMLEDGVLPNHITLVSVLCACNHAGL--VAEAKHHFESMEKKF 530
                     E  ++FG + E G     +TL  +L  C  +G   V+E  H +     K 
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV---KI 746

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           G +        +++I  + G   +A  L D MP + +A +W  +L A
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/716 (40%), Positives = 453/716 (63%), Gaps = 4/716 (0%)

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            ++ +WN   + ++H   +  A+  FK ++ S I  +  +L  +++A  G+ D  LG +IH
Sbjct: 858  NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               IK  +   +  +N+L++MY+K G +  A   F +    D++SWN +I+    +    
Sbjct: 918  ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977

Query: 180  WALKLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLHCSLIKMEIKSDPIVGV 236
             A+  F+ +    + P+ FT  S L+AC+  +  E   LG Q+H   IK  I +D  V  
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 237  GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
             L+D+Y+K G MDEA  + H   + +L +WN ++ G++++    +A   F  M+  G+  
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 297  DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            D+ TL+T +K+      +   KQ+ A ++K  F +D ++ + ++D Y KCG + +A+++F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 357  KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
             E S  D VA T+MI+ Y + G  + AL +Y  M+   + PD +  ++L+ A + L+A E
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217

Query: 417  QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            QGKQ+H +++K  +  D F G SLV+MY KCGS+ DA R F ++  R +V W+AM+ GLA
Sbjct: 1218 QGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLA 1277

Query: 477  QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            QHG   EAL +F  M  +G+ P+ +T + VL AC+H+GL +EA  +F++M K +GI P  
Sbjct: 1278 QHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEI 1337

Query: 537  EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
            EHY+C++D LGRAG+ QEA  ++ +MPF+A+AS++ ALLGA R   + E  +  A+ L A
Sbjct: 1338 EHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLA 1397

Query: 597  IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            ++P  SS +VLLSNIYA++  WD+V   R  MK   +KK+PG SWI+VK+KV+ F V DR
Sbjct: 1398 LDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDR 1457

Query: 657  SHARSKEIYAKLDEVSDLLNKAG-YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            SH ++  IY K++++   + + G YVP  +  L DVEE EKE+ LY+HSEKLA+AFGLI+
Sbjct: 1458 SHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLIS 1517

Query: 716  TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            TPP ATIRV KNLR+C DCH++ + ISK+  REI++RD NRFHHFRNG+CSCG YW
Sbjct: 1518 TPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 256/523 (48%), Gaps = 49/523 (9%)

Query: 3    KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
            ++  +  DL LG + H  +V +G   D ++ N+L+ MY+KCG+   +R++FD   +R +V
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 63   SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP----NEFSLS-------SMINACAGSGD 111
            +WNS+ + Y    F + +     E VL G R      EF  S        ++  C  SG 
Sbjct: 679  TWNSILAAYAQ--FADSSY----ENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGF 732

Query: 112  SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
              +   +HGY++K+G++ D+F + ALV++Y K G +  A  +F  +   D V WN ++  
Sbjct: 733  VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792

Query: 172  CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL--IKMEIK 229
             V +   D AL+ F     S   P+                      LHC +  +  ++ 
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFFPDF-------------------SNLHCVIGGVNSDVS 833

Query: 230  SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            ++       V  YA          +F      N+ AWN  ++  L  G  + A   F  +
Sbjct: 834  NNRKRHAEQVKAYAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885

Query: 290  YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             R  +G D  TL  +L +      + + +Q+HAL +K++F     + NSL++ Y K G V
Sbjct: 886  LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945

Query: 350  EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
              A K F  S  +DL++  +MI++YAQ  L  EA+  + ++    + PD F  +S+L AC
Sbjct: 946  YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005

Query: 410  ANLSAYEQ---GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            +     E    G QVHV+ IK G ++D+F   +L+++Y+K G +D+A+       D  + 
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065

Query: 467  SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
            SW+A++ G  +  + ++AL+ F  M E G+  + ITL + + A
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 204/390 (52%), Gaps = 33/390 (8%)

Query: 1    VLKACTSKKD---LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
            VL+AC++  +     LG QVH   +  G  +D FV+ +L+ +Y+K G   ++  L     
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060

Query: 58   ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            +  + SWN++   Y+  +   +A+  F  M   GI  +E +L++ I A     +   G++
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120

Query: 118  IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            I  Y+IKLG+++D++ ++ ++DMY K G++ +A+ +F +I  PD V+W  +I+G + +  
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180

Query: 178  NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             D AL ++  M+ S + P+ +T+ + +KA + +   E G+Q+H +++K++   D  VG  
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240

Query: 238  LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
            LVDMY KCGS+ +A  +F  M  + ++ WN ++ G  Q+G   EA +LF  M   G+  D
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300

Query: 298  QTTLSTVLKSV--------------ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
            + T   VL +               A F+  G+  ++   S              L+DA 
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSC-------------LVDAL 1347

Query: 344  GKCGHVEDAVKIFKESSAVDLVACTSMITA 373
            G+ G +++A  +    +++   A  SM  A
Sbjct: 1348 GRAGRIQEAENVI---ASMPFKASASMYRA 1374



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 207/472 (43%), Gaps = 33/472 (6%)

Query: 111  DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
            D  LG++ H   +  G   D +  N L+ MY+K G+L  A  VF      D+V+WN+++A
Sbjct: 626  DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685

Query: 171  GCVLHEHNDW-----ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
                   + +       +LF  ++    +    T    LK C      ++   +H   +K
Sbjct: 686  AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 226  MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
            +  + D  V   LV++Y K G + +AR++F  MPE++ + WN+++  +++N    EA   
Sbjct: 746  IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 286  FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
            F   +R G   D + L  V+  V S   +   ++ HA  VK               AY  
Sbjct: 806  FSAFHRSGFFPDFSNLHCVIGGVNS--DVSNNRKRHAEQVK---------------AY-- 846

Query: 346  CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
                  A+K+F      ++ A    +T +   G    A+  +  +    I  DS     +
Sbjct: 847  ------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 406  LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            L+A       + G+Q+H  +IK  F       NSL+NMY+K G +  A++ F   P+  +
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 466  VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA--GLVAEAKHHF 523
            +SW+ MI   AQ+    EA+  F  +L DG+ P+  TL SVL AC+    G         
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 524  ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                 K GI         +ID+  + GK  EA E +    +  + + W A++
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 6/227 (2%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           +S  +   + + K+ HA  V +    D Y+ N+LI  Y KCG +  A ++F +SS  DLV
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 366 ACTSMITAYAQFGLGE-----EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              S++ AYAQF         E  +L+  +++   +      + LL  C      +  + 
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH + +K GF  D F   +LVN+Y K G +  A   F ++P+R  V W+ M+    ++  
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
             EAL+ F      G  P+   L  V+   N + +    K H E ++
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGGVN-SDVSNNRKRHAEQVK 844



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 11/167 (6%)

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GK+ H  I+  G + D +  N+L+ MY+KCGS+  A + F +  DR +V+W++++   AQ
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689

Query: 478 HGRGK-----EALQMFGQMLEDGVLPNHITLVSVLCACNHAGL--VAEAKHHFESMEKKF 530
                     E  ++FG + E G     +TL  +L  C  +G   V+E  H +     K 
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV---KI 746

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           G +        +++I  + G   +A  L D MP + +A +W  +L A
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 313/772 (40%), Positives = 469/772 (60%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+     +D   G  +H  ++  G   D F  N L+  Y   G   D+ +LFD +P  +
Sbjct: 9   MLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTN 68

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+ +L   +      + A      +   G   N+F  ++++        +     +H 
Sbjct: 69  TVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHA 128

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  KLG+ +D F   AL+D Y+  GN++ A  VF  I   D+VSW  ++A    +  ++ 
Sbjct: 129 YVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHED 188

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L LF QM+     PN FT ++ALK+C G+E  ++G+ +H   +K+    D  VG+ L++
Sbjct: 189 SLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLE 248

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-DQT 299
           +Y K G + EA+  F  MP+ +LI W+++IS + Q+    EA  LF  M +  V   +  
Sbjct: 249 LYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNF 308

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ++VL++ AS   + +  Q+H+  +K   +S+ ++ N+L+D Y KCG +E++VK+F  S
Sbjct: 309 TFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGS 368

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  + VA  ++I  Y Q G GE+AL L+  M   +I P     SS+L A A+L A E G+
Sbjct: 369 TEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGR 428

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   IK  +  D+   NSL++MYAKCG IDDA   F ++  +  VSW+A+I G + HG
Sbjct: 429 QIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHG 488

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G EAL +F  M +    PN +T V VL AC++AGL+ + + HF+SM + +GI+P  EHY
Sbjct: 489 LGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHY 548

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+ +LGR+G+F EA++L+  +PFQ +  VW ALLGA  I+KN+++G+  A+ +  +EP
Sbjct: 549 TCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEP 608

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +  +THVLLSN+YA+A  WDNVA VR+ MK  K+KKEPG+SW+E +  V+ FTVGD SH 
Sbjct: 609 QDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHP 668

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             K I+A L+ +      AGYVP     L DVE+ EKE+LL+ HSE+LA+AFGLI  P G
Sbjct: 669 NIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSG 728

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +IR+ KNLRICVDCH   + +SKIV REI++RD+NRFHHFR G CSCG YW
Sbjct: 729 CSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 250/486 (51%), Gaps = 5/486 (1%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           S ++M+     + D   G+ +H + +K G   D+F+ N L++ Y   G LEDA  +F ++
Sbjct: 5   SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              + VS+  +  G         A +L  ++       N F +T+ LK    M+L +   
Sbjct: 65  PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H  + K+  ++D  VG  L+D Y+ CG++D AR +F  +  K++++W  +++ + +N 
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENY 184

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              ++  LF  M   G   +  T+S  LKS    +A  V K VH  ++K  ++ D Y+  
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREIN 396
           +L++ Y K G + +A + F+E    DL+  + MI+ YAQ    +EAL+L+  M Q   + 
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P++F  +S+L ACA+L     G Q+H  ++K G  S+ F  N+L+++YAKCG I+++ + 
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKL 364

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F+   ++  V+W+ +I G  Q G G++AL +F  ML   + P  +T  SVL A   A LV
Sbjct: 365 FTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRA--SASLV 422

Query: 517 A-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           A E      S+  K            +ID+  + G+  +A    D M  Q   S W AL+
Sbjct: 423 ALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS-WNALI 481

Query: 576 GAARIY 581
               I+
Sbjct: 482 CGYSIH 487


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 302/766 (39%), Positives = 457/766 (59%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC+    L LG Q+H      G   D FV ++LV +YAKCG    + ++F  +PE++ 
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+WN L + Y     +   +  F  M+   ++ NEF+L++++  CA S +   G+ IH  
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            IK GY+ + F    LVDMY+K G   DA+ VFK I+ PDIV W+A+I        ++ +
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +KLF  M+  +  PN +T  S L A       + G+ +H  + K   ++D  V   LV M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K G + +   ++  M +++LI+WN  +SG    G      ++F  M  EG   +  T 
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L S +    +   +QVHA  +K   + ++++  +LID Y KC ++EDA   F   S 
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DL   T +IT YAQ   GE+AL  + +MQ   + P+ F  +  L+ C++L++ E G+Q+
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  + K G +SD F G++LV+MYAKCG +++A+  F  +  R  ++W+ +I G AQ+G+G
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            +AL  F  ML++G+ P+ +T   +L AC+H GLV E K HF SM + FGI P  +H AC
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           M+DILGR GKF E  + +  M    NA +W  +LGA++++ N+ +G+ AA  LF ++PE+
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            S+++LLSNI+A+ G WD+V +VR  M    +KKEPG SW+E   +V+TF   D SH + 
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQI 879

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           +EI+ KLDE+   L    YVP  E  LH+V E+EK++ L  HSE+LA+ F LI+T     
Sbjct: 880 QEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKK 939

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           IR+ KNLRIC DCH   + IS I ++EI+VRDV RFHHF+NG+CSC
Sbjct: 940 IRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/575 (30%), Positives = 299/575 (52%), Gaps = 2/575 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C SK+ L +   +HG++V    + D  +  SLV +YAKC     +R +   +P+R 
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW +L    V   F  +++  F+EM   GI PNEF+L++ + AC+      LG+++H 
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + KLG   D+F  +ALVD+YAK G +E A  +F  +   + V+WN ++ G         
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKLF  M   ++  N FT T+ LK CA  +  + G+ +H  +IK   + +  +G GLVD
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG   +A  +F  + + +++ W+ +I+   Q G   E+  LF  M       +Q T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + ++L +  +   +   + +HA   K  FE+D  + N+L+  Y K G V D  K+++   
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  + ++     G+ +  L ++  M +    P+ +   S+L +C+ L     G+Q
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH HIIK     + F   +L++MYAKC  ++DAD AF+ +  R + +W+ +I   AQ  +
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++AL  F QM ++GV PN  TL   L  C+    + E      SM  K G        +
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGS 656

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++D+  + G  +EA  L + +  + +   W  ++
Sbjct: 657 ALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 142/412 (34%), Positives = 228/412 (55%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           SSM+  CA      + + IHG  +K   + D     +LV++YAK      A  V   +  
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VSW A+I G V     + ++ LFQ+M++  I PN FT  + LKAC+     +LG+Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H    K+ +  D  VG  LVD+YAKCG ++ A  +F  MPE+N + WN++++G+ Q G  
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
                LF  M    V  ++ TL+TVLK  A+ + +   + +H+L +K  +E +++I   L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG   DA+ +FK     D+V  +++IT   Q G  EE++KL+  M+  +  P+ 
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQ 415

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           +   SLL+A  N    + G+ +H  + K+GF +D    N+LV MY K G + D  + +  
Sbjct: 416 YTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           + DR ++SW+A + GL   G     L +F  MLE+G +PN  T +S+L +C+
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 262/482 (54%), Gaps = 6/482 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C + K+L  G  +H +++  G++ +EF+   LV MY+KCG  ID+  +F  I +  
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W++L +C       EE++  F  M L    PN++++ S+++A   +G+   G+ IH 
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-- 178
              K G+++D+  +NALV MY K G + D   +++ +   D++SWNA ++G  LH+    
Sbjct: 440 CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG--LHDCGMY 497

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D  L +F  M      PNM+T+ S L +C+ +     GRQ+H  +IK ++  +  V   L
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKC  +++A + F+ +  ++L  W ++I+ + Q     +A + F  M +EGV  ++
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL+  L   +S  ++   +Q+H++  K+   SD ++ ++L+D Y KCG +E+A  +F+ 
Sbjct: 618 FTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEA 677

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D +A  ++I  YAQ G G +AL  +  M D  I+PD    + +L+AC++    E+G
Sbjct: 678 LIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEG 737

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           K+    + + FG          +V++  + G  D+ +    ++   +  + W  ++G   
Sbjct: 738 KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASK 797

Query: 477 QH 478
            H
Sbjct: 798 MH 799



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 198/400 (49%), Gaps = 7/400 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A T+  +L  G  +H  V   GF++D  V+N+LV MY K G   D  +L++++ +R 
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN+  S    C   +  +  F  M+  G  PN ++  S++ +C+   D   GR++H 
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK   D + F   AL+DMYAK   LEDA   F  +   D+ +W  +I         + 
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEK 600

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  F+QM+   + PN FT    L  C+ +   E G+QLH  + K    SD  VG  LVD
Sbjct: 601 ALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVD 660

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG M+EA  +F  +  ++ IAWN +I G+ QNG   +A + F  M  EG+  D  T
Sbjct: 661 MYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVT 720

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI--VNSLIDAYGKCG---HVEDAVKI 355
            + +L S  S Q +    + H  S+   F     +     ++D  G+ G    +ED ++ 
Sbjct: 721 FTGIL-SACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQK 779

Query: 356 FKES-SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
            + S +A+           +    LGE+A     E+Q  E
Sbjct: 780 MQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 172/315 (54%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y+S L+ CA      + + +H  ++K  I  D  + V LV++YAKC     AR++   MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           ++++++W  +I G +  G   ++  LF  M  EG+  ++ TL+T LK+ +   A+ + KQ
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HA + K     D ++ ++L+D Y KCG +E A K+F      + V    ++  YAQ G 
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
               LKL+  M + ++  + F  +++L  CAN    +QG+ +H  IIK G+  + F G  
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           LV+MY+KCG   DA   F  I    IV WSA+I  L Q G+ +E++++F  M     LPN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 500 HITLVSVLCACNHAG 514
             T+ S+L A  + G
Sbjct: 415 QYTICSLLSAATNTG 429


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 286/773 (36%), Positives = 464/773 (60%), Gaps = 4/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + CT  +D  LG QV   ++  G   + +  N+L+ +Y+ CGN  ++R++FD++  ++
Sbjct: 63  LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKT 122

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN+L + Y     ++EA   F++MV  G+ P+  +  S+++AC+       G+++H 
Sbjct: 123 VVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHA 182

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G+ SD     ALV MY K G+++DA  VF  +   D+ ++N ++ G    +  DW
Sbjct: 183 QVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA--KSGDW 240

Query: 181 --ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A +LF +M+   + PN  ++ S L  C   E    G+ +H   +   +  D  V   L
Sbjct: 241 EKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSL 300

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MY  CGS++ AR +F  M  +++++W ++I G+ +NG   +A  LF  M  EG+  D+
Sbjct: 301 IRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDR 360

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   ++ + A    +   +++H+      F +D  +  +L+  Y KCG ++DA ++F  
Sbjct: 361 ITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDA 420

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ ++MI AY + G G EA + +  M+   I PD     +LLNAC +L A + G
Sbjct: 421 MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVG 480

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            +++   IK   +S    GN+L+ M AK GS++ A   F  +  R +++W+AMIGG + H
Sbjct: 481 MEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLH 540

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G  +EAL +F +ML++   PN +T V VL AC+ AG V E +  F  + +  GI P  + 
Sbjct: 541 GNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKL 600

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y CM+D+LGRAG+  EA  L+ +MP +  +S+W +LL A RI+ N++V + AAE    I+
Sbjct: 601 YGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMID 660

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P   + +V LS++YA+AGMW+NVAKVR+ M+   ++KE G +WIEV  KV+TF V DRSH
Sbjct: 661 PYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSH 720

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
               EIYA+L  + + + + GY+P+ +  LHDV E +KE+ + +HSEKLA+A+G+++ P 
Sbjct: 721 PLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPS 780

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  IR+ KNLR+C DCH++ +FISK+  REII RD +RFHHF++G CSCG YW
Sbjct: 781 GTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 118/215 (54%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  T   + +     +   + KQV    ++   + + Y +N+LI  Y  CG+V +A +I
Sbjct: 55  IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F       +V   ++I  YAQ G  +EA  L+ +M D  + P      S+L+AC++ +  
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
             GK+VH  ++  GF+SD   G +LV+MY K GS+DDA + F  +  R + +++ M+GG 
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           A+ G  ++A ++F +M + G+ PN I+ +S+L  C
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 308/770 (40%), Positives = 464/770 (60%), Gaps = 42/770 (5%)

Query: 34   NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
            NS+V  Y  C    ++R LFD +PER+ VSW  + S YVH     EA   F +M  +  R
Sbjct: 299  NSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR 358

Query: 94   PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
            P++     +++A  G  D  L   +   +IK GY+ D+   +A+++ Y + G+L+ A+  
Sbjct: 359  PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF 418

Query: 154  FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
            F+ +   +  SW  +IA        D A++L++++    +     T T+ + A A     
Sbjct: 419  FETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYA----- 469

Query: 214  ELGRQLHCSLIKMEIKSDPIVGV-GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            ++GR     LI  EI +  +V    ++  Y + G + EA+ +F  MP KN  +W  +I+G
Sbjct: 470  QVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAG 529

Query: 273  HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
             +QN    EA  L   ++R G     ++ ++ L + A+   + + + +H+L++KT  + +
Sbjct: 530  FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 589

Query: 333  DYIVNSLIDAYGKCGHVED-------------------------------AVKIFKESSA 361
             Y++N LI  Y KCG+VED                               A  +F++   
Sbjct: 590  SYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPK 649

Query: 362  VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             D+V+ T++I+AY Q G GE AL L+L+M  R I P+    +SLL+AC NL A + G+Q 
Sbjct: 650  RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709

Query: 422  HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
            H  I K GF +  F GNSL+ MY KCG  +D    F E+P+  +++W+A++ G AQ+G G
Sbjct: 710  HALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLG 768

Query: 482  KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            KEA+++F QM  +G+LP+ ++ + VLCAC+HAGLV E   HF SM +K+GI P+  HY C
Sbjct: 769  KEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTC 828

Query: 542  MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
            M+D+LGRAG   EA  L++ MP + ++ +W ALLGA RI++NVE+GQ  AE LF +   K
Sbjct: 829  MVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPK 888

Query: 602  SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            S+T+VLLSN++AS GMWD VA++R+ MKD  L KEPG+SWI+VK+K++ F  GDR+H + 
Sbjct: 889  SATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQI 948

Query: 662  KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            +EIY+ L E        GY+P     LHDVEE +K+  L +HSEKLAV FG+++TP G+ 
Sbjct: 949  EEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSP 1008

Query: 722  IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I++ KNLRIC DCHT  +F+SK+  R+II+RD NRFHHFR+GSCSCG YW
Sbjct: 1009 IQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 266/537 (49%), Gaps = 43/537 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A T   DL L   +  I + TG++ D  V ++++  Y + G+   +   F+ +PER+
Sbjct: 367 VLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERN 426

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SW ++ + +  C  L++A+  ++ +    +     + ++M+ A A  G     R I  
Sbjct: 427 EYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFD 482

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +    + ++ + NA++  Y + G L++A  +F+ +   +  SW A+IAG V +E +  
Sbjct: 483 EIL----NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESRE 538

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  ++  S   P+  ++TSAL ACA +   E+GR +H   IK   + +  V  GL+ 
Sbjct: 539 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLIS 598

Query: 241 MYAKCGS-------------------------------MDEARMIFHLMPEKNLIAWNIV 269
           MYAKCG+                               +D+AR++F  MP++++++W  +
Sbjct: 599 MYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAI 658

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           IS ++Q G    A  LF  M   G+  +Q T++++L +  +  AI + +Q HAL  K  F
Sbjct: 659 ISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGF 718

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           ++  ++ NSLI  Y KCG+ ED   +F+E    DL+   +++   AQ GLG+EA+K++ +
Sbjct: 719 DTFLFVGNSLITMYFKCGY-EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQ 777

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           M+   I PD      +L AC++    ++G    +    K+G M   +    +V++  + G
Sbjct: 778 MEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAG 837

Query: 449 SIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
            + +A+     +P +   V W A++G    H R  E  Q   + L     P   T V
Sbjct: 838 YLSEAEALIENMPVKPDSVIWEALLGACRIH-RNVELGQRVAERLFQMTKPKSATYV 893



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 245/545 (44%), Gaps = 88/545 (16%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  N+ +    + G   ++RR+F+ + +R VVSWNS+ + Y     ++EA   F      
Sbjct: 172 FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF------ 225

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
                               D+ +G+ I  ++I             L+  YAK G +E+A
Sbjct: 226 --------------------DAFVGKNIRTWTI-------------LLTGYAKEGRIEEA 252

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF+ +   ++VSWNA+I+G V +     A KLF +M       N+ ++ S        
Sbjct: 253 REVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK----NVASWNS-------- 300

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                                      +V  Y  C  M EAR +F  MPE+N ++W ++I
Sbjct: 301 ---------------------------VVTGYCHCYRMSEARELFDQMPERNSVSWMVMI 333

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           SG++      EA  +F  M R     DQ+    VL ++     + +   +  +++KT +E
Sbjct: 334 SGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYE 393

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            D  + +++++AY + G ++ A+  F+     +  + T+MI A+AQ G  ++A++LY  +
Sbjct: 394 GDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV 453

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
            ++ +       ++++ A A +   ++ + +   I+      +  A N+++  Y + G +
Sbjct: 454 PEQTVATK----TAMMTAYAQVGRIQKARLIFDEILN----PNVVAWNAIIAGYTQNGML 505

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            +A   F ++P +   SW+AMI G  Q+   +EAL++  ++   G +P+  +  S L AC
Sbjct: 506 KEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSAC 565

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
            + G V E      S+  K G Q        +I +  + G  ++   +  T+  +   S 
Sbjct: 566 ANIGDV-EIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS- 623

Query: 571 WGALL 575
           W +L+
Sbjct: 624 WNSLI 628


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/751 (39%), Positives = 453/751 (60%), Gaps = 1/751 (0%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEA 80
           V+  G   D  + +SLV +Y KC +   +R++ + +P + V  WN   S       L+EA
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 81  VCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDM 140
           V  F  M  + IR N+F  +S+I+A A  GD+  G  IH    K G++SD+  +NA V M
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           Y K  ++E+    FK +   ++ S N +++G    E  D   ++  Q+      PNM+T+
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            S LK CA       G+ +H  +IK  I  D  +   LV++YAKCGS + A  +F  +PE
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           +++++W  +I+G +  G       +F  M  EG   +  T  ++L+S +S   + + KQV
Sbjct: 255 RDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           HA  VK + + +D++  +L+D Y K   +EDA  IF      DL A T ++  YAQ G G
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E+A+K +++MQ   + P+ F  +S L+ C+ ++  + G+Q+H   IK G   D F  ++L
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 433

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MYAKCG ++DA+  F  +  R  VSW+ +I G +QHG+G +AL+ F  ML++G +P+ 
Sbjct: 434 VDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDE 493

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T + VL AC+H GL+ E K HF S+ K +GI P  EHYACM+DILGRAGKF E    ++
Sbjct: 494 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 553

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            M   +N  +W  +LGA +++ N+E G+ AA  LF +EPE  S ++LLSN++A+ GMWD+
Sbjct: 554 EMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDD 613

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V  VR  M    +KKEPG SW+EV  +V+ F   D SH + +EI+ KL ++   L   GY
Sbjct: 614 VTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGY 673

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
            P  +  LH+V + EK++LL++HSE+LA+AF L++T    TIR+ KNLRIC DCH   + 
Sbjct: 674 TPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKS 733

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IS+I ++E++VRD+N FHHF+NGSCSC  +W
Sbjct: 734 ISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 275/515 (53%), Gaps = 9/515 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ A  S  D   G  +H  V   GF+SD  ++N+ V MY K  +  +  + F A+   +
Sbjct: 96  LISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIEN 155

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + S N+L S +   +  ++      ++++ G  PN ++  S++  CA  GD   G+ IHG
Sbjct: 156 LASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHG 215

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G + D    N+LV++YAK G+   A  VF +I   D+VSW A+I G V   +   
Sbjct: 216 QVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS- 274

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L++F QM +   NPNM+T+ S L++C+ +   +LG+Q+H  ++K  +  +  VG  LVD
Sbjct: 275 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 334

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +++A  IF+ + +++L AW ++++G+ Q+G   +A   F  M REGV  ++ T
Sbjct: 335 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 394

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++ L   +    +   +Q+H++++K     D ++ ++L+D Y KCG VEDA  +F    
Sbjct: 395 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 454

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D V+  ++I  Y+Q G G +ALK +  M D    PD      +L+AC+++   E+GK+
Sbjct: 455 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 514

Query: 421 VHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               + K   ++ T    + +V++  + G   + +    E+     ++ W  ++G    H
Sbjct: 515 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMH 574

Query: 479 GR----GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           G      + A+++F   LE  +  N+I L ++  A
Sbjct: 575 GNIEFGERAAMKLFE--LEPEIDSNYILLSNMFAA 607



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 228/460 (49%), Gaps = 3/460 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +KI    IK G   D    ++LV++Y K  +L+ A  V +++   D+  WN  ++     
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A++LF  M+ + I  N F + S + A A +     G  +H  + K   +SD ++ 
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
              V MY K  S++     F  M  +NL + N ++SG        +   +   +  EG  
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +  T  ++LK+ AS   +   K +H   +K+    D ++ NSL++ Y KCG    A K+
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F E    D+V+ T++IT +   G G   L+++ +M     NP+ +   S+L +C++LS  
Sbjct: 249 FGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + GKQVH  I+K     + F G +LV+MYAK   ++DA+  F+ +  R + +W+ ++ G 
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQ G+G++A++ F QM  +GV PN  TL S L  C+    + ++     SM  K G    
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL-DSGRQLHSMAIKAGQSGD 426

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               + ++D+  + G  ++A  + D +  +   S W  ++
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTII 465


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 299/720 (41%), Positives = 443/720 (61%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +FD +PER+ VS+ +L   Y   +   EA   F  +   G   N F  ++++        
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           + LGR +HG  +K+GY S+ F   AL+D Y+  G +  A  VF +I   D+VSW  +IA 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
              ++    AL+ F QM+ +   PN FT+   LKAC G++  + G+ +HCS++K   + D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             VGVGL+++Y +CG  D+A   F  MP+ ++I W+ +IS   Q+G   +A  +F  M R
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
             V  +Q T S+VL++ A  +++ + K +H  ++K    +D ++ N+L+  Y KCG +E 
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           ++++F+  S  + V+  ++I +Y Q G GE AL L+  M   ++       SS+L ACA 
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L+A E G QVH    K  +  D   GN+L++MYAKCGSI DA   F  +  R  VSW+A+
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAI 421

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G + HG G EA++MF  M E    P+ +T V VL AC++ G + E K +F SM++ +G
Sbjct: 422 ICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYG 481

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I+P  EHY CM+ ++GR+G   +A++ ++ +PF+ +  +W ALLGA  I+ +VE+G+ +A
Sbjct: 482 IEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISA 541

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           + +  +EP   ++HVLLSNIYA A  W NVA VR+ MK   +KKEPG+SWIE +  V+ F
Sbjct: 542 QRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCF 601

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
           TV D SHA  K I   L+ ++    KAGY P +   L DVE+ EKE+LL+ HSE+LA+AF
Sbjct: 602 TVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAF 661

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GL+  P G  IR+ KNLRICVDCH+  + ISKIV R+IIVRD+NRFHHF NGSCSC  YW
Sbjct: 662 GLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 282/529 (53%), Gaps = 6/529 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK   S +   LG  VHG V+  G+ S+ F+  +L+  Y+  G    +R +FD I  + 
Sbjct: 52  VLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKD 111

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + + Y   D   EA+ FF +M ++G +PN F+ + ++ AC G  +   G+ +H 
Sbjct: 112 MVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHC 171

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K  Y+ D++    L+++Y + G+ +DA   F D+   D++ W+ +I+       ++ 
Sbjct: 172 SVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEK 231

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++F QM+ + + PN FT++S L+A A +E  +L + +H   +K  + +D  V   L+ 
Sbjct: 232 ALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMA 291

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG ++++  +F  + ++N ++WN +I  ++Q G    A SLF  M R  V   + T
Sbjct: 292 CYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVT 351

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S++L++ A+  A+ +  QVH L+ KT +  D  + N+LID Y KCG ++DA  +F    
Sbjct: 352 YSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLD 411

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+  ++I  Y+  GLG EA+K++  M++ +  PD      +L+AC+N    ++GKQ
Sbjct: 412 LRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               + + +G          +V +  + G++D A +   +IP +  ++ W A++G    H
Sbjct: 472 YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531

Query: 479 GR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
                G+ + Q   + LE     +H+ L ++       G VA  + H +
Sbjct: 532 NDVELGRISAQRVLE-LEPRDEASHVLLSNIYARARRWGNVAYVRKHMK 579



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 147/257 (57%)

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
           M+F  MPE+N +++  +I G+ Q+   +EA  LF  ++ EG   +    +TVLK + S +
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
              + + VH   +K  + S+ +I  +LIDAY   G V  A ++F E S+ D+V+ T MI 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           +YA+     EAL+ + +M+     P++F  + +L AC  L  ++ GK VH  ++K  +  
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D + G  L+ +Y +CG  DDA RAF ++P   ++ WS MI   AQ G+ ++AL++F QM 
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 493 EDGVLPNHITLVSVLCA 509
              V+PN  T  SVL A
Sbjct: 241 RAFVIPNQFTFSSVLQA 257


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 298/774 (38%), Positives = 469/774 (60%), Gaps = 4/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI--PE 58
           VLKAC +  +  LG ++HG+ V  GF    FV N+L+ MY KCG+   +R LFD I   +
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              VSWNS+ S +V      EA+  F+ M   G+  N ++  + +          LG  I
Sbjct: 211 EDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG ++K  + +D++ ANAL+ MYAK G +EDA  VF  +   D VSWN +++G V +E  
Sbjct: 271 HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELY 330

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL  F+ M++S   P+  +  + + A         G+++H   I+  + S+  +G  L
Sbjct: 331 RDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTL 390

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKC  +      F  M EK+LI+W  +I+G+ QN   +EA +LF  +  +G+  D 
Sbjct: 391 IDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDP 450

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             + +VL++ +  ++    +++H    K    +D  + N++++ YG+ GH + A + F+ 
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFES 509

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
             + D+V+ TSMIT     GL  EAL+L+  ++   I PDS    S L+A ANLS+ ++G
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H  +I+ GF  +    +SLV+MYA CG+++++ + F  +  R ++ W++MI     H
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMH 629

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G EA+ +F +M ++ V+P+HIT +++L AC+H+GL+ E K  FE M+  + ++P  EH
Sbjct: 630 GCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEH 689

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YACM+D+L R+   +EA + V +MP + ++ VW ALLGA  I+ N E+G+ AA+ L   +
Sbjct: 690 YACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSD 749

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
            + S  + L+SNI+A+ G W++V +VR  MK N LKK PG SWIEV +K++TF   D+SH
Sbjct: 750 TKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSH 809

Query: 659 ARSKEIYAKLDEVSDLL-NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
            ++ +IY KL + + LL  K GY+   +   H+V E EK Q+LY HSE+LA+ +GL+ TP
Sbjct: 810 PQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTP 869

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G +IR+ KNLRIC DCHT F+  S++  R ++VRD NRFHHF  G CSCG +W
Sbjct: 870 KGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/581 (29%), Positives = 309/581 (53%), Gaps = 11/581 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C + K L  G Q+H  ++ +   +  F+A  L+ MY KCG+  D+ ++FD + ER+
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERT 109

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +WN++   +V      EA+  +KEM + G+  +  +  S++ AC   G+S LG +IHG
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI--EHPDIVSWNAVIAGCVLHEHN 178
            ++K G+   +F  NAL+ MY K G+L  A  +F  I  E  D VSWN++I+  V     
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF++M+   +  N +T+ +AL+        +LG  +H + +K    +D  V   L
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MYAKCG M++A  +F  M  ++ ++WN ++SG +QN    +A + F  M       DQ
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            ++  ++ +      +   K+VHA +++   +S+  I N+LID Y KC  V+     F+ 
Sbjct: 350 VSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFEC 409

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               DL++ T++I  YAQ     EA+ L+ ++Q + ++ D  +  S+L AC+ L +    
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H ++ K   ++D    N++VN+Y + G  D A RAF  I  + IVSW++MI     +
Sbjct: 470 REIHGYVFKRD-LADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN 528

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQ 536
           G   EAL++F  + +  + P+ I ++S L A  +   + + K  H F   +  F   P+ 
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              + ++D+    G  + + ++  ++  Q +  +W +++ A
Sbjct: 589 ---SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINA 625



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 14/181 (7%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S LL+ C  + A  QG+Q+H  ++K       F    L++MY KCGS+ DA + F E+ +
Sbjct: 50  SLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTE 107

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG---LVAEA 519
           R I +W+AM+G     G+  EA++++ +M   GV  +  T  SVL AC   G   L AE 
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167

Query: 520 KHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASV-WGALLG 576
             H  +++  FG    +  + C  +I + G+ G    A  L D +  +   +V W +++ 
Sbjct: 168 --HGVAVKCGFG----EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIIS 221

Query: 577 A 577
           A
Sbjct: 222 A 222


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 298/807 (36%), Positives = 466/807 (57%), Gaps = 36/807 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ C   +    G  VH  +   G + D ++ NSL+  Y+K  +   + ++F  +  R 
Sbjct: 62  VIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRD 121

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+S+ + Y   +   +A   F+ M  + I PN  +  S++ AC        GRKIH 
Sbjct: 122 VVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHT 181

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
               +G ++D+  A AL+ MY+K G +  A  VF  +   ++VSW A+I     H   + 
Sbjct: 182 IVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +L++QM  + I+PN  T+ S L +C   E    GR++H  + +  +++D IV   L+ 
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG-GDMEAA----SLFPWMYREGVG 295
           MY KC S+ EAR IF  M ++++I+W+ +I+G+ Q+G  D E+      L   M REGV 
Sbjct: 302 MYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVF 361

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            ++ T  ++L++  +  A+   +Q+HA   K  FE D  +  ++ + Y KCG + +A ++
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-------------------- 395
           F + +  ++VA TS ++ Y + G    A K++ EM  R +                    
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVF 481

Query: 396 -----------NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
                       PD     ++L AC  L+  E+GK VH   +K G  SDT    SL+ MY
Sbjct: 482 ELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMY 541

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCG + +A   F ++ +R  V+W+AM+ G  QHG G EA+ +F +ML++ V PN ITL 
Sbjct: 542 SKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLT 601

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           +V+ AC+ AGLV E +  F  M++ F + P ++HY CM+D+LGRAG+ QEA E + +MP 
Sbjct: 602 AVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPC 661

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           + + SVW ALLGA + + NV++ + AA  +  +EP  +S ++ LSNIYA AG WD+  KV
Sbjct: 662 EPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKV 721

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           RR M D  LKK+ G S IE+  +++TF   D +H     I+A+L+ ++  + +AGY P +
Sbjct: 722 RRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDM 781

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
              LHDV++ +KE+ L HHSEKLA+A+GL+ TP G  IR+ KNLR+C DCHT+ +FISKI
Sbjct: 782 RFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKI 841

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
             REI+ RD NRFH+F NG+CSCG +W
Sbjct: 842 RKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 165/596 (27%), Positives = 291/596 (48%), Gaps = 47/596 (7%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L EA+     +   G+  N  +   +I  CA +     G+ +H    +LG + D++  N+
Sbjct: 37  LREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L++ Y+K  ++  A  VF+ +   D+V+W+++IA    + H   A   F++M  + I PN
Sbjct: 97  LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T+ S LKAC    + E GR++H  +  M +++D  V   L+ MY+KCG +  A  +FH
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M E+N+++W  +I  + Q+    EA  L+  M + G+  +  T  ++L S  + +A+  
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +++H+   +   E+D  + N+LI  Y KC  V++A +IF   S  D+++ ++MI  YAQ
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336

Query: 377 FGLG-----EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            G       +E  +L   M+   + P+     S+L AC    A EQG+Q+H  + K GF 
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396

Query: 432 SDTFAGNSLVNMYAKCGSI-------------------------------DDADRAFSEI 460
            D     ++ NMYAKCGSI                                 A++ FSE+
Sbjct: 397 LDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEM 456

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVAEA 519
           P R +VSW+ MI G AQ+G   +  ++   M  +G  P+ +T++++L AC   AGL    
Sbjct: 457 PTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGK 516

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
             H E++  K G++        +I +  + G+  EA  + D M    +   W A+L    
Sbjct: 517 LVHAEAV--KLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLAG-- 571

Query: 580 IYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYAS---AGMWDNVAKVRRFMKDN 631
            Y     G  A ++   +  E+ S   + L+ + ++   AG+     ++ R M+++
Sbjct: 572 -YGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQED 626



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 158/322 (49%), Gaps = 9/322 (2%)

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W +  +G L+     EA  L   + + G+  +  T   V++  A  +     K VH    
Sbjct: 29  WRLCKAGRLR-----EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLD 83

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           +   E D Y+ NSLI+ Y K   V  A ++F+  +  D+V  +SMI AYA      +A  
Sbjct: 84  ELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFD 143

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
            +  M D  I P+     S+L AC N S  E+G+++H  +   G  +D     +L+ MY+
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS 203

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG I  A   F ++ +R +VSW+A+I   AQH +  EA +++ QML+ G+ PN +T VS
Sbjct: 204 KCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVS 263

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           +L +CN    +   +     + ++ G++        +I +  +    QEA E+ D M  +
Sbjct: 264 LLNSCNTPEALNRGRRIHSHISER-GLETDMIVANALITMYCKCNSVQEAREIFDRMS-K 321

Query: 566 ANASVWGALLG--AARIYKNVE 585
            +   W A++   A   YK+ E
Sbjct: 322 RDVISWSAMIAGYAQSGYKDKE 343


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/771 (38%), Positives = 464/771 (60%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L ACT  +   LG  +H  V   GF S+ FV N+L+ +Y +C +F  + R+F  +    
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   + A+  F EM LSG+ P+  +++S++ AC+  GD   G+++H 
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K G   D     +L+D+Y K G++E+A+ +F   +  ++V WN ++      +    
Sbjct: 269 YLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAK 328

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +  +F +M ++ + PN FTY   L+ C       LG Q+H   IK   +SD  V   L+D
Sbjct: 329 SFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLID 388

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+K G +D+A+ I  ++ EK++++W  +I+G++Q+    EA   F  M   G+  D   
Sbjct: 389 MYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIG 448

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++ + + A  +A+    Q+HA    + + +D  I N L+  Y +CG  ++A   F+   
Sbjct: 449 LASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE 508

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             + +    +I+ +AQ GL EEALK++++M       + F   S ++A ANL+  +QGKQ
Sbjct: 509 HKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQ 568

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK G+ S+T   N+L+++Y KCGSI+DA   F E+  R  VSW+ +I   +QHGR
Sbjct: 569 IHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGR 628

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL +F QM + G+ P+ +T V VL AC+H GLV E   +F+SM  + GI P  +HYA
Sbjct: 629 GLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYA 688

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++DILGRAG+   A   V+ MP  A++ VW  LL A +++KN+E+G+ AA+ L  +EP 
Sbjct: 689 CVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPH 748

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+++VLLSN YA  G W +  ++R+ MKD  ++KEPG SWIEVK+ V+ F VGDR H  
Sbjct: 749 DSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           + +IY  L  ++D L K GY        H+ E+  K+   + HSEKLAVAFGL++ P   
Sbjct: 809 ADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCM 868

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +RV KNLR+C DCHT  +F S ++ REI++RDV RFHHF NGSCSCG YW
Sbjct: 869 PLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/555 (32%), Positives = 292/555 (52%), Gaps = 2/555 (0%)

Query: 2   LKACT-SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L+AC  S +   L  ++H   +  G      + N L+ +YAK G    +RR+F+ +  R 
Sbjct: 48  LRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRD 107

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ S Y      EEAV  ++EM  SG+ P  + LSS+++AC  +    LGR IH 
Sbjct: 108 NVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHV 167

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G+ S+ F  NAL+ +Y +  +   A  VF D+ + D V++N +I+G     H D 
Sbjct: 168 QVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDR 227

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F +M+ S ++P+  T  S L AC+ +     G+QLH  L+K  +  D I+   L+D
Sbjct: 228 ALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLD 287

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y K G ++EA  IF      N++ WN+++  + Q     ++  +F  M   GV  ++ T
Sbjct: 288 LYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFT 347

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L++      IG+ +Q+H+L++K  F+SD Y+   LID Y K G ++ A +I     
Sbjct: 348 YPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE 407

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ TSMI  Y Q    +EAL+ + EMQ   I PD+   +S ++ACA + A  QG Q
Sbjct: 408 EKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ 467

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +   G+ +D    N LV +YA+CG   +A  +F  I  +  ++W+ +I G AQ G 
Sbjct: 468 IHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGL 527

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +EAL++F +M + G   N  T VS + A  +   + + K    +   K G     E   
Sbjct: 528 YEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGK-QIHARVIKTGYTSETEISN 586

Query: 541 CMIDILGRAGKFQEA 555
            +I + G+ G  ++A
Sbjct: 587 ALISLYGKCGSIEDA 601


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/780 (40%), Positives = 461/780 (59%), Gaps = 11/780 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++  T    L  G   H  ++ T F    F+ N+L+ MY KCG    +++LFD +P+R+
Sbjct: 25  LVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRN 84

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL S Y    F  E +  FKE  +S +R ++F+ S+ ++ C  + D  LGR IH 
Sbjct: 85  VVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHA 144

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G    +   N+L+DMY K G ++ A  VF+  +  D VSWN++IAG V    ND 
Sbjct: 145 LITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDE 204

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAG--MELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            L+L  +M    +N N +   SALKAC        E G+ LH   +K+ +  D +VG  L
Sbjct: 205 MLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTAL 264

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----NGGDMEAASLFPWMYREG 293
           +D YAK G +++A  IF LMP+ N++ +N +I+G LQ     +    EA  LF  M   G
Sbjct: 265 LDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRG 324

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +   + T S++LK+ ++ +A    KQ+HA   K   +SD++I N+L++ Y   G +ED +
Sbjct: 325 MKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGL 384

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F  +  +D+V+ TS+I  + Q G  E  L L+ E+      PD F  S +L+ACANL+
Sbjct: 385 KCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLA 444

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A + G+Q+H + IK G  + T   NS + MYAKCG ID A+  F E  +  IVSWS MI 
Sbjct: 445 AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMIS 504

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             AQHG  KEA+ +F  M   G+ PNHIT + VL AC+H GLV E   +FE M+K  GI 
Sbjct: 505 SNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT 564

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  +H AC++D+LGRAG+  EA   +    F+ +  +W +LL A R++K  + G+  AE 
Sbjct: 565 PNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAER 624

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +  +EPE ++++VLL NIY  AG+     ++R  MKD  +KKEPG+SWIEV + V++F  
Sbjct: 625 VIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVA 684

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE--QLLYHHSEKLAVAF 711
           GDRSH  S+ IY +L+E+ + + K  Y+   E  + D  E + +   ++ +HSEKLAV F
Sbjct: 685 GDRSHPNSQVIYVQLEEMLEEIKKLDYID--EKLVSDASEPKHKDNSMVSYHSEKLAVTF 742

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G+I+ P  A +RV KNLR C  CH + +  S++ +REII+RD  RFH FR+GSCSCG YW
Sbjct: 743 GIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 239/461 (51%), Gaps = 9/461 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+  +  + + ++     +G  + G+  H + IK  +   +F  N L+ MY K G  + A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +F  +   ++VSWN++I+G          + LF++ + S++  + FT+++AL  C   
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               LGR +H  +    +    ++   L+DMY KCG +D AR++F    E + ++WN +I
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS--FQAIGVCKQVHALSVKTA 328
           +G+++ G + E   L   M R G+  +   L + LK+  S    +I   K +H  +VK  
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----GLGEEA 383
            + D  +  +L+D Y K G +EDA KIFK     ++V   +MI  + Q          EA
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 313

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           + L+ EMQ R + P  F  SS+L AC+ + A+E GKQ+H  I K+   SD F GN+LV +
Sbjct: 314 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 373

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y+  GSI+D  + F   P   +VSW+++I G  Q+G+ +  L +F ++L  G  P+  T+
Sbjct: 374 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 433

Query: 504 VSVLCAC-NHAGLVAEAKHHFESMEKKFG-IQPMQEHYACM 542
             +L AC N A + +  + H  +++   G    +Q    CM
Sbjct: 434 SIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 474



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 2/299 (0%)

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           M+     P  Y  G+  D  T + +++      ++   K  H   +KT F+   +++N+L
Sbjct: 1   MQTPPHNPQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNL 60

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +  Y KCG  + A K+F      ++V+  S+I+ Y Q G   E + L+ E +  ++  D 
Sbjct: 61  LYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDK 120

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F  S+ L+ C        G+ +H  I   G        NSL++MY KCG ID A   F  
Sbjct: 121 FTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFES 180

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAE 518
             +   VSW+++I G  + G   E L++  +ML  G+  N   L S L AC ++     E
Sbjct: 181 ADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIE 240

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                     K G+         ++D   + G  ++A ++   MP   N  ++ A++  
Sbjct: 241 CGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 307/748 (41%), Positives = 452/748 (60%), Gaps = 33/748 (4%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS--CYVHCDFLEEAVCFF 84
           D DE   N+++  YA  G   ++R+LF   P RS ++W+SL S  C   CD   EA+  F
Sbjct: 69  DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDV--EALELF 126

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
            EM   G RPN+F+  S++  C+       G++IH ++IK  +DS+ F    LVDMYAK 
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 145 GNLEDAVAVFK-DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
             + +A  +F+   +  + V W A++ G   +     A++ F+ M+   I  N FT+ S 
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L AC  +     G Q+H  +++    ++  VG  LVDMY+KCG +  AR +   M   + 
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I G ++ G   EA SLF  M+   +  D+ T  +VL   +    +     VH+L
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSL 366

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            VKT FE+   + N+L+D Y K G+ + A  +F++ +  D+++ TS++T     G  EEA
Sbjct: 367 IVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 426

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L+L+ EM+   I+PD  V +++L+ACA L+  E GKQVH + +K G  S     NSLV+M
Sbjct: 427 LRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSM 486

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG I+DA++ F  +  + +++W+A+I G AQ+GRG++                    
Sbjct: 487 YAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD-------------------- 526

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
                   HAGLV   + +F+SME+ +GI+P  EHYACMID+LGR+GK  EA EL++ M 
Sbjct: 527 --------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMA 578

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            Q +A+VW ALL A R++ NVE+G+ AA  LF +EP+ +  +VLLSN+Y++AG W+  AK
Sbjct: 579 VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 638

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
            RR MK   + KEPG SWIE+  KV+ F   DRSH R+ EIY+K+DE+  L+ +AGYVP 
Sbjct: 639 TRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPD 698

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
           +   LHD++E  KE  L +HSEKLAVAFGL+  PPGA IR+ KNLRIC DCHT+ +++S 
Sbjct: 699 MNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSG 758

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  R +I+RD N FHHFR G+CSC  YW
Sbjct: 759 VFHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 207/383 (54%), Gaps = 1/383 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           VL+ C+    L  G Q+H   + T FDS+ FV   LV MYAKC   +++  LF+  P+ R
Sbjct: 144 VLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKR 203

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + V W ++ + Y       +A+  F++M   GI  N+F+  S++ AC        G ++H
Sbjct: 204 NHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVH 263

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  ++ G+ +++F  +ALVDMY+K G+L +A  + + +E  D VSWN++I GCV     +
Sbjct: 264 GCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGE 323

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LF+ M    +  + FTY S L   + +        +H  ++K   ++  +V   LV
Sbjct: 324 EALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALV 383

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G  D A  +F  M +K++I+W  +++G + NG   EA  LF  M   G+  DQ 
Sbjct: 384 DMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQI 443

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            ++ VL + A    +   KQVHA  +K+   S   + NSL+  Y KCG +EDA K+F   
Sbjct: 444 VIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 503

Query: 360 SAVDLVACTSMITAYAQFGLGEE 382
              D++  T++I  YAQ G G +
Sbjct: 504 EIQDVITWTALIVGYAQNGRGRD 526



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 162/285 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S      G QVHG +V +GF ++ FV ++LV MY+KCG+  ++RR+ + +    
Sbjct: 246 ILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDD 305

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS+    V     EEA+  F+ M L  ++ +EF+  S++N  +   D      +H 
Sbjct: 306 PVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHS 365

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G+++     NALVDMYAK G  + A  VF+ +   D++SW +++ GCV +   + 
Sbjct: 366 LIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEE 425

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF +M+   I+P+     + L ACA + + E G+Q+H + +K  + S   V   LV 
Sbjct: 426 ALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVS 485

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
           MYAKCG +++A  +F  M  +++I W  +I G+ QNG   + A L
Sbjct: 486 MYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGL 530



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 200/406 (49%), Gaps = 47/406 (11%)

Query: 196 NMFTYTSALKACAGMELKELGRQLH-----CSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           N+  YT + K C  +E  EL   +      C  +     S+ ++        +KCG +D+
Sbjct: 5   NLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVL-----SNLSKCGRVDD 59

Query: 251 ARMIFHLMPEKNLIAWNI-------------------------------VISGHLQNGGD 279
           AR +F +MP+++  +WN                                +ISG+ + G D
Sbjct: 60  ARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCD 119

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           +EA  LF  M  EG   +Q T  +VL+  + +  +   KQ+HA ++KT F+S+ ++V  L
Sbjct: 120 VEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGL 179

Query: 340 IDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           +D Y KC  + +A  +F+      + V  T+M+T Y+Q G G +A++ + +M+   I  +
Sbjct: 180 VDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECN 239

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            F   S+L AC ++SA   G QVH  I++ GF ++ F G++LV+MY+KCG + +A R   
Sbjct: 240 QFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLE 299

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            +     VSW++MI G  + G G+EAL +F  M    +  +  T  SVL   N    V +
Sbjct: 300 TMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVL---NCFSFVMD 356

Query: 519 AKH--HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            ++     S+  K G +  +     ++D+  + G F  A ++ + M
Sbjct: 357 MRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKM 402



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 34/199 (17%)

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C  L   E    +   +   G +  +   N +++  +KCG +DDA + F  +PDR   SW
Sbjct: 16  CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75

Query: 469 SAMIGGLAQHGRGK-------------------------------EALQMFGQMLEDGVL 497
           + MIG  A  GR                                 EAL++F +M  +G  
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 498 PNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           PN  T  SVL  C+   L+ + K  H  +++ +F           ++D+  +     EA 
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV--VTGLVDMYAKCKCILEAE 193

Query: 557 ELVDTMPFQANASVWGALL 575
            L +  P + N  +W A++
Sbjct: 194 YLFELAPDKRNHVLWTAMV 212


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/772 (38%), Positives = 468/772 (60%), Gaps = 2/772 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDS--DEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           L+ C ++ D   G  VHG VV  G     D F AN L+ MY K G    +RRLFD +PER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++VS+ +L   +      E A   F+ +   G   N+F L++M+        + L   +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             + KLG+D + F  + L+D Y+    + DA  VF  I   D V W A+++    ++  +
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A ++F +M+ S   PN F  TS LKA   +    LG+ +H   IK    ++P VG  L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG + +AR+ F ++P  ++I  + +IS + Q+  + +A  LF  + R  V  ++ 
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +LS+VL++  +   +   KQ+H  ++K   ESD ++ N+L+D Y KC  ++ ++KIF   
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+  +++  ++Q GLGEEAL ++ EMQ  ++       SS+L ACA+ ++     
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  I K  F +DT  GNSL++ YAKCG I DA + F  + +R I+SW+A+I G A HG
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           +  +AL++F +M +  V  N IT V++L  C+  GLV      F+SM    GI+P  EHY
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHY 605

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++ +LGRAG+  +A++ +  +P   +A VW ALL +  I+KNV +G+ +AE +  IEP
Sbjct: 606 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEP 665

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +  +T+VLLSN+YA+AG  D VA +R+ M++  ++K PG+SW+E+K +++ F+VG   H 
Sbjct: 666 QDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHP 725

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             + I A L+ ++   ++ GY+P +   LHDV++ +K ++L+ HSE+LA+A+GL+ TPPG
Sbjct: 726 DMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPG 785

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLR C+DCHT+F  ISKIV REIIVRD+NRFHHF +G CSCG YW
Sbjct: 786 HPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 248/484 (51%), Gaps = 6/484 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS--DMFSANALVDMYAKVGNLEDAVA 152
           + F+ +  +  C   GD+  GR +HG+ ++ G     D+F AN L++MY K+G L  A  
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +   ++VS+  ++         + A  LF++++      N F  T+ LK    M+ 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             L   +H    K+    +  VG GL+D Y+ C  + +A  +F+ +  K+ + W  ++S 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + +N     A  +F  M   G   +   L++VLK+     ++ + K +H  ++KT  +++
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +L+D Y KCG ++DA   F+     D++  + MI+ YAQ    E+A +L+L +  
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P+ +  SS+L AC N+   + GKQ+H H IK G  SD F GN+L++ YAKC  +D 
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           + + FS + D   VSW+ ++ G +Q G G+EAL +F +M    +    +T  SVL AC  
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477

Query: 513 AGLVAEAKHHFESMEKK-FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
              +  A     S+EK  F    +  +   +ID   + G  ++A+++   +  + +   W
Sbjct: 478 TASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISW 534

Query: 572 GALL 575
            A++
Sbjct: 535 NAII 538



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 212/404 (52%), Gaps = 15/404 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKA      + LG  +HG  + T  D++  V  +L+ MYAKCG+  D+R  F+ IP   
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+  + + S Y   +  E+A   F  ++ S + PNE+SLSS++ AC        G++IH 
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK+G++SD+F  NAL+D YAK  +++ ++ +F  +   + VSWN ++ G       + 
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F +M+++++     TY+S L+ACA         Q+HCS+ K    +D ++G  L+D
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG + +A  +F  + E+++I+WN +ISG+  +G   +A  LF  M +  V  +  T
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL------IDAYGKCGHVEDAVK 354
              +L   +S   +      H LS+  +   D  I  S+      +   G+ G + DA++
Sbjct: 569 FVALLSVCSSTGLVN-----HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQ 623

Query: 355 ----IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
               I    SA+   A  S    +    LG  + +  LE++ ++
Sbjct: 624 FIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQD 667


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/776 (38%), Positives = 470/776 (60%), Gaps = 8/776 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI--PE 58
           VLKAC +  +  LG ++HG+ V  G+    FV N+L+ MY KCG+   +R LFD I   +
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              VSWNS+ S +V      EA+  F+ M   G+  N ++  + +          LG  I
Sbjct: 211 EDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  +K  + +D++ ANAL+ MYAK G +EDA  VF+ +   D VSWN +++G V +E  
Sbjct: 271 HGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY 330

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             AL  F+ M++S   P+  +  + + A   +G  LK  G+++H   I+  + S+  +G 
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLK--GKEVHAYAIRNGLDSNMQIGN 388

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMYAKC  +      F  M EK+LI+W  +I+G+ QN   +EA +LF  +  +G+  
Sbjct: 389 TLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDV 448

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   + +VL++ +  ++    +++H    K    +D  + N++++ YG+ GH++ A + F
Sbjct: 449 DPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAF 507

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +   + D+V+ TSMIT     GL  EAL+L+  ++   I PDS    S L+A ANLS+ +
Sbjct: 508 ESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLK 567

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +GK++H  +I+ GF  +    +SLV+MYA CG+++++ + F  +  R ++ W++MI    
Sbjct: 568 KGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANG 627

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG G +A+ +F +M +  V+P+HIT +++L AC+H+GL+ E K  FE M+  + ++P  
Sbjct: 628 MHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWP 687

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYACM+D+L R+   +EA   V  MP + ++ +W ALLGA  I+ N E+G+ AA+ L  
Sbjct: 688 EHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQ 747

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            + E S  + L+SNI+A+ G W++V +VR  MK N LKK PG SWIEV +K++TF   D+
Sbjct: 748 SDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDK 807

Query: 657 SHARSKEIYAKLDEVSDLL-NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           SH ++ +IY KL + + LL  K GY+   +   H+V E EK Q+LY HSE+LA+ +GL+ 
Sbjct: 808 SHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLV 867

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TP G  IR+ KNLRIC DCHT F+  S++  R ++VRD NRFHHF  G CSCG +W
Sbjct: 868 TPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 174/581 (29%), Positives = 315/581 (54%), Gaps = 11/581 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C + K L  G Q+H +++ +   +  F+A  LV+MY KCG+  D+ ++FD + ER+
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN+L   +V      EA+  +K+M + G+  +  +  S++ AC   G+S LG +IHG
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI--EHPDIVSWNAVIAGCVLHEHN 178
            ++K GY   +F  NAL+ MY K G+L  A  +F  I  E  D VSWN++I+  V   + 
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF++M+   +  N +T+ +AL+        +LG  +H +++K    +D  V   L
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MYAKCG M++A  +F  M  ++ ++WN ++SG +QN    +A + F  M   G   DQ
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            ++  ++ +      +   K+VHA +++   +S+  I N+L+D Y KC  V+     F+ 
Sbjct: 350 VSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFEC 409

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               DL++ T++I  YAQ     EA+ L+ ++Q + ++ D  +  S+L AC+ L +    
Sbjct: 410 MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H ++ K   ++D    N++VN+Y + G ID A RAF  I  + IVSW++MI     +
Sbjct: 470 REIHGYVFKRD-LADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHN 528

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQ 536
           G   EAL++F  + +  + P+ I ++S L A  +   + + K  H F   +  F   P+ 
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              + ++D+    G  + + ++  ++  Q +  +W +++ A
Sbjct: 589 ---SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINA 625



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 8/178 (4%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S LL+ C    A  QG+Q+H  ++K       F    LV MY KCGS+ DA + F E+ +
Sbjct: 50  SLLLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSE 107

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           R I SW+A++G     G+  EA++++  M   GV  +  T  SVL AC   G + E++  
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKAC---GALGESRLG 164

Query: 523 FE--SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV-WGALLGA 577
            E   +  K G          +I + G+ G    A  L D +  +   +V W +++ A
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 307/763 (40%), Positives = 465/763 (60%), Gaps = 13/763 (1%)

Query: 18  HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           H  V+  GFDSD F+ N+L+ +Y + G+ + +R+LFD +P+R+ V+W  L S Y      
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL----GRKIHGYSIKLGY-DSDMF 132
           E+A    KEM+  G  PN F+  S I AC    +S+L    GR++HGY+I+ G  D+ + 
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQ---ESMLWRRKGRQVHGYAIRTGLNDAKVA 139

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N L++MYAK G+++ A +VF  +   D VSWN++I G   ++  + A+K +  M+ + 
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + P+ F   SAL +CA +    LG+Q H   IK+ +  D  V   L+ +YA+   + E +
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQ 259

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
            +F  M E++ ++WN VI     +G  + EA  +F  M R G   ++ T   +L +V+S 
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSM 370
               +  Q+HAL +K   + D+ I N+L+  YGK G +E+  +IF + S   D V+  SM
Sbjct: 320 STSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSM 379

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I+ Y    L  +A+ L   M  R    D F  +++L+ACA ++  E G +VH   I+   
Sbjct: 380 ISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACL 439

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            SD   G++LV+MY+KCG ID A R F+ +P R + SW++MI G A+HG G  AL++F +
Sbjct: 440 ESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTR 499

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M   G LP+HIT V VL AC+H GLV E   +F+SM + +G+ P  EHY+CM+D+LGRAG
Sbjct: 500 MKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAG 559

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           +  +    ++ MP + N  +W  +LGA      +  E+G+ AAEMLF ++P+ +  +VLL
Sbjct: 560 ELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLL 619

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SN+YAS G W+++A+ RR M++  +KKE G SW+ +KD V+ F  GD SH     IYAKL
Sbjct: 620 SNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKL 679

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
            E+   +  AGYVP ++  L+D+E   KE+LL +HSEKLAVAF ++    G  IR+ KNL
Sbjct: 680 KELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNL 738

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+C DCH++F++ISK+V R I++RD NRFHHF +G CSC  YW
Sbjct: 739 RVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 216/485 (44%), Gaps = 47/485 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C S   + LG Q HG  +  G D D  V+N+L+ +YA+     + +++F  + ER  
Sbjct: 211 LSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQ 270

Query: 62  VSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSWN++          + EA+  F EM+ +G  PN  +  +++   +    S L  +IH 
Sbjct: 271 VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHA 330

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHND 179
             +K     D    NAL+  Y K G +E+   +F  + E  D VSWN++I+G + +E   
Sbjct: 331 LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLC 390

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ L   M       + FT+ + L ACA +   E G ++H   I+  ++SD ++G  LV
Sbjct: 391 KAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALV 450

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KCG +D A   F+LMP +NL +WN +ISG+ ++G    A  LF  M   G   D  
Sbjct: 451 DMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHI 510

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL + +           H   V   FE       S+ + YG    VE        S
Sbjct: 511 TFVGVLSACS-----------HIGLVDEGFE----YFKSMTEVYGLVPRVE------HYS 549

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYEQ 417
             VDL+            G   E  K+   +    I P+  +  ++L AC   N    E 
Sbjct: 550 CMVDLL------------GRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTEL 597

Query: 418 GKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSA 470
           G++    +     M    A N   L NMYA  G  +D  R    + +  +      SW  
Sbjct: 598 GRRAAEMLFN---MDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVT 654

Query: 471 MIGGL 475
           M  G+
Sbjct: 655 MKDGV 659



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 14/180 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L  G++VH   +    +SD  + ++LV MY+KCG    + R F+ +P R+
Sbjct: 414 VLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRN 473

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG----- 115
           + SWNS+ S Y      + A+  F  M LSG  P+  +   +++AC+  G    G     
Sbjct: 474 LYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFK 533

Query: 116 --RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
              +++G   ++ + S M      VD+  + G L+        +   P+I+ W  V+  C
Sbjct: 534 SMTEVYGLVPRVEHYSCM------VDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC 587


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 288/712 (40%), Positives = 439/712 (61%), Gaps = 1/712 (0%)

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++WN   S ++      EAV  F +M+ S +  +  +   M++  AG     LG++IHG
Sbjct: 871  VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHG 930

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++ G D  +   N L++MY K G++  A  VF  +   D+VSWN +I+GC L    + 
Sbjct: 931  IVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEEC 990

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLV 239
            ++ +F  +    + P+ FT  S L+AC+ +     L  Q+H   +K  +  D  V   L+
Sbjct: 991  SVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLI 1050

Query: 240  DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            D+Y+K G M+EA  +F      +L +WN ++ G++ +G   +A  L+  M   G   +Q 
Sbjct: 1051 DVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQI 1110

Query: 300  TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            TL+   K+      +   KQ+ A+ VK  F  D ++++ ++D Y KCG +E A +IF E 
Sbjct: 1111 TLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEI 1170

Query: 360  SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
             + D VA T+MI+   + G  E AL  Y  M+  ++ PD +  ++L+ AC+ L+A EQG+
Sbjct: 1171 PSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGR 1230

Query: 420  QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            Q+H + +K     D F   SLV+MYAKCG+I+DA   F       I SW+AMI GLAQHG
Sbjct: 1231 QIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHG 1290

Query: 480  RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              +EALQ F +M   GV P+ +T + VL AC+H+GLV+EA  +F SM+K +GI+P  EHY
Sbjct: 1291 NAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHY 1350

Query: 540  ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            +C++D L RAG+ +EA +++ +MPF+A+AS++  LL A R+  + E G+  AE L A+EP
Sbjct: 1351 SCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEP 1410

Query: 600  EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
              S+ +VLLSN+YA+A  W+NVA  R  M+   +KK+PG SW+++K+KV+ F  GDRSH 
Sbjct: 1411 SDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHE 1470

Query: 660  RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             +  IY K++ +   + + GY+P  +  L DVEE +KE  LY+HSEKLA+A+GL+ TPP 
Sbjct: 1471 ETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPS 1530

Query: 720  ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             T+RV KNLR+C DCH + ++ISK+  RE+++RD NRFHHFR+G CSCG YW
Sbjct: 1531 TTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 250/453 (55%), Gaps = 2/453 (0%)

Query: 11   LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
            L LG Q+HGIVV +G D    V N L+ MY K G+   +R +F  + E  +VSWN++ S 
Sbjct: 922  LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981

Query: 71   YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDS 129
                   E +V  F +++  G+ P++F+++S++ AC+  G    L  +IH  ++K G   
Sbjct: 982  CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041

Query: 130  DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            D F +  L+D+Y+K G +E+A  +F + +  D+ SWNA++ G ++      AL+L+  M+
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101

Query: 190  SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
             S    N  T  +A KA  G+   + G+Q+   ++K     D  V  G++DMY KCG M+
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161

Query: 250  EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
             AR IF+ +P  + +AW  +ISG ++NG +  A   +  M    V  D+ T +T++K+ +
Sbjct: 1162 SARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACS 1221

Query: 310  SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               A+   +Q+HA +VK     D +++ SL+D Y KCG++EDA  +FK ++   + +  +
Sbjct: 1222 LLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNA 1281

Query: 370  MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-F 428
            MI   AQ G  EEAL+ + EM+ R + PD      +L+AC++     +  +    + K +
Sbjct: 1282 MIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIY 1341

Query: 429  GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            G   +    + LV+  ++ G I +A++  S +P
Sbjct: 1342 GIEPEIEHYSCLVDALSRAGRIREAEKVISSMP 1374



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 270/567 (47%), Gaps = 31/567 (5%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
            +L+   +  DL LG + H  ++ +G   D F+ N+L+ MY+KCG+   +R+LFD  P+  
Sbjct: 632  ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691

Query: 59   RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            R +V+WN++ S   H D   +    F+ +  S +     +L+ +   C  S        +
Sbjct: 692  RDLVTWNAILSA--HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749

Query: 119  HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
            HGY++K+G   D+F A ALV++YAK G + +A  +F  +   D+V WN ++   V     
Sbjct: 750  HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809

Query: 179  DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              AL LF +   + + P+  T  +  +     +          ++++ ++K     G  L
Sbjct: 810  YEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQ----------NVLEWQLKQLKAYGTKL 859

Query: 239  VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
                          M        ++IAWN  +S  LQ G   EA   F  M    V  D 
Sbjct: 860  F-------------MYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDG 906

Query: 299  TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             T   +L  VA    + + KQ+H + V++  +    + N LI+ Y K G V  A  +F +
Sbjct: 907  LTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL-SAYEQ 417
             + VDLV+  +MI+  A  GL E ++ +++++    + PD F  +S+L AC++L      
Sbjct: 967  MNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHL 1026

Query: 418  GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
              Q+H   +K G + D+F   +L+++Y+K G +++A+  F       + SW+AM+ G   
Sbjct: 1027 ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIV 1086

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFGIQPMQ 536
             G   +AL+++  M E G   N ITL +   A    GLV  +     +++  K G     
Sbjct: 1087 SGDFPKALRLYILMQESGERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDL 1144

Query: 537  EHYACMIDILGRAGKFQEAMELVDTMP 563
               + ++D+  + G+ + A  + + +P
Sbjct: 1145 FVISGVLDMYLKCGEMESARRIFNEIP 1171



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 213/447 (47%), Gaps = 37/447 (8%)

Query: 1    VLKACTS-KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
            VL+AC+S      L  Q+H   +  G   D FV+ +L+ +Y+K G   ++  LF      
Sbjct: 1013 VLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF 1072

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             + SWN++   Y+      +A+  +  M  SG R N+ +L++   A  G      G++I 
Sbjct: 1073 DLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQ 1132

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               +K G++ D+F  + ++DMY K G +E A  +F +I  PD V+W  +I+GCV +   +
Sbjct: 1133 AVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEE 1192

Query: 180  WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             AL  +  M+ S++ P+ +T+ + +KAC+ +   E GRQ+H + +K+    DP V   LV
Sbjct: 1193 HALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLV 1252

Query: 240  DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            DMYAKCG++++AR +F       + +WN +I G  Q+G   EA   F  M   GV  D+ 
Sbjct: 1253 DMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRV 1312

Query: 300  TLSTVLKSVASFQAIG-VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL + +    +    +  +++      E +    + L+DA  + G + +A K+   
Sbjct: 1313 TFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVI-- 1370

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
             S++   A  SM                                 +LLNAC      E G
Sbjct: 1371 -SSMPFEASASMY-------------------------------RTLLNACRVQVDRETG 1398

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYA 445
            K+V   ++     SD+ A   L N+YA
Sbjct: 1399 KRVAEKLLALE-PSDSAAYVLLSNVYA 1424



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 215/463 (46%), Gaps = 39/463 (8%)

Query: 101  SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
            S++     + D  LG++ H   +  G+  D F  N L+ MY+K G+L  A  +F      
Sbjct: 631  SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 161  --DIVSWNAVIAGCVLHEHNDWA---LKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
              D+V+WNA+++      H D A     LF+ ++ S ++    T     K C        
Sbjct: 691  SRDLVTWNAILSA-----HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSA 745

Query: 216  GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
               LH   +K+ ++ D  V   LV++YAK G + EAR++F  M  ++++ WN+++  ++ 
Sbjct: 746  AESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVD 805

Query: 276  NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
             G + EA  LF    R G+  D  TL T+ + V S Q + +  Q+  L            
Sbjct: 806  TGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV-LEWQLKQLK----------- 853

Query: 336  VNSLIDAYGKCGHVEDAVKIF---KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
                  AYG         K+F    +    D++A    ++ + Q G   EA+  +++M +
Sbjct: 854  ------AYG--------TKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMIN 899

Query: 393  REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
              +  D      +L+  A L+  E GKQ+H  +++ G       GN L+NMY K GS+  
Sbjct: 900  SRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSR 959

Query: 453  ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
            A   F ++ +  +VSW+ MI G A  G  + ++ MF  +L  G+LP+  T+ SVL AC+ 
Sbjct: 960  ARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSS 1019

Query: 513  AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             G          +   K G+         +ID+  ++GK +EA
Sbjct: 1020 LGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 297/807 (36%), Positives = 464/807 (57%), Gaps = 36/807 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C   +    G  VH  +   G   D ++ NSL+  Y+K G+     ++F  +  R 
Sbjct: 84  IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+S+ + Y   +   +A   F+ M  + I PN  +  S++ AC         R+IH 
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G ++D+  A AL+ MY+K G +  A  +F+ ++  ++VSW A+I     H   + 
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +L+++M  + I+PN  T+ S L +C   E    GR++H  + +  +++D +V   L+ 
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG-GDMEAA----SLFPWMYREGVG 295
           MY KC  + +AR  F  M ++++I+W+ +I+G+ Q+G  D E+      L   M REGV 
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            ++ T  ++LK+ +   A+   +Q+HA   K  FESD  +  ++ + Y KCG + +A ++
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-------------------- 395
           F +    ++VA  S++T Y + G    A K++ EM  R +                    
Sbjct: 444 FSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVF 503

Query: 396 -----------NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
                       PD     S+L AC  LSA E+GK VH   +K G  SDT    SL+ MY
Sbjct: 504 ELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMY 563

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCG + +A   F +I +R  V+W+AM+ G  QHG G EA+ +F +ML++ V PN IT  
Sbjct: 564 SKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFT 623

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           +V+ AC  AGLV E +  F  M++ F ++P ++HY CM+D+LGRAG+ QEA E +  MP 
Sbjct: 624 AVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPC 683

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           + + SVW ALLGA + + NV++ + AA  +  +EP  +S +V LSNIYA AG WD+  KV
Sbjct: 684 EPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKV 743

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R+ M D  LKK+ G S IE+  +++TF   D +H     I+A+L+ ++  + +AGY P +
Sbjct: 744 RKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDM 803

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
              LHDV+E +KE+ L HHSEKLA+A+GL+ TPPG  IR+ KNLR+C DCHT+ +FISKI
Sbjct: 804 RFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKI 863

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
             REI+ RD NRFH+F+NG+CSCG +W
Sbjct: 864 RKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 286/603 (47%), Gaps = 48/603 (7%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA+     +   G+  N  +   +I  CA       G+ +H    +LG   D++  N+
Sbjct: 59  LKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L++ Y+K G++     VF+ +   D+V+W+++IA    + H   A   F++MK + I PN
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T+ S LKAC    + E  R++H  +    +++D  V   L+ MY+KCG +  A  IF 
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M E+N+++W  +I  + Q+    EA  L+  M + G+  +  T  ++L S  + +A+  
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +++H+   +   E+D  + N+LI  Y KC  ++DA + F   S  D+++ ++MI  YAQ
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358

Query: 377 FGLG-----EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            G       +E  +L   M+   + P+     S+L AC+   A EQG+Q+H  I K GF 
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFE 418

Query: 432 SDTFAGNSLVNMYAKCGSI-------------------------------DDADRAFSEI 460
           SD     ++ NMYAKCGSI                                 A++ FSE+
Sbjct: 419 SDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEM 478

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R +VSW+ MI G AQ G   +  ++   M  +G  P+ +T++S+L AC     +   K
Sbjct: 479 STRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGK 538

Query: 521 H-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
             H E++  K G++        +I +  + G+  EA  + D +    +   W A+L    
Sbjct: 539 LVHAEAV--KLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAMLAG-- 593

Query: 580 IYKNVEVGQHAAE----MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
            Y    +G  A +    ML    P    T   + +    AG+     ++ R M+++  + 
Sbjct: 594 -YGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED-FRM 651

Query: 636 EPG 638
           +PG
Sbjct: 652 KPG 654


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/758 (39%), Positives = 464/758 (61%), Gaps = 7/758 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H ++V  G     F++  LV +YA  G+   SR  FD IP++ V +WNS+ S YVH   
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 77  LEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EA+ CF++ +++S IRP+ ++   ++ AC   G  + GRKIH ++ KLG+  ++F A 
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAA 254

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ MY++ G    A ++F D+   D+ SWNA+I+G + + +   AL +  +M+   I  
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N  T  S L  C  +        +H  +IK  ++ D  V   L++MYAK G++++AR  F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M   ++++WN +I+ + QN   + A   F  M   G   D  TL ++   VA  +   
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 316 VCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
             + VH   ++  +  +D ++ N+++D Y K G ++ A K+F+     D+++  ++IT Y
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494

Query: 375 AQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           AQ GL  EA+++Y  M++ +EI P+     S+L A A++ A +QG ++H  +IK     D
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 554

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F    L+++Y KCG + DA   F ++P    V+W+A+I     HG  ++ L++FG+ML+
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           +GV P+H+T VS+L AC+H+G V E K  F  M++ +GI+P  +HY CM+D+LGRAG  +
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLE 673

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A + +  MP Q +AS+WGALLGA RI+ N+E+G+ A++ LF ++ +    +VLLSNIYA
Sbjct: 674 MAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYA 733

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           + G W+ V KVR   ++  LKK PG S IEV  KV  F  G++SH + KEIY +L  ++ 
Sbjct: 734 NVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            +   GY+P     L DVEE EKE +L  HSE+LA+AFG+I+TPP + IR+ KNLR+C D
Sbjct: 794 KMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGD 853

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CH + +FIS+I  REI+VRD NRFHHF++G CSCG YW
Sbjct: 854 CHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 254/485 (52%), Gaps = 12/485 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC +  D   G ++H      GF  + FVA SL+ MY++ G    +R LFD +P R 
Sbjct: 224 VLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRD 280

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN++ S  +      +A+    EM L GI+ N  ++ S++  C   GD      IH 
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND- 179
           Y IK G + D+F +NAL++MYAK GNLEDA   F+ +   D+VSWN++IA    +E ND 
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAA---YEQNDD 397

Query: 180 --WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGV 236
              A   F +M+ +   P++ T  S     A     +  R +H  +++   +  D ++G 
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN 457

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVG 295
            +VDMYAK G +D A  +F ++P K++I+WN +I+G+ QNG   EA  ++  M   + + 
Sbjct: 458 AVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEII 517

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +Q T  ++L + A   A+    ++H   +KT    D ++   LID YGKCG + DA+ +
Sbjct: 518 PNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSL 577

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F +      V   ++I+ +   G  E+ LKL+ EM D  + PD     SLL+AC++    
Sbjct: 578 FYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 637

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGG 474
           E+GK     + ++G          +V++  + G ++ A     ++P +   S W A++G 
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 697

Query: 475 LAQHG 479
              HG
Sbjct: 698 CRIHG 702



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K +HAL V        +I   L++ Y   G V  +   F +    D+ A  SMI+AY   
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 195

Query: 378 GLGEEALKLYLE-MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
           G   EA+  + + +   EI PD +    +L AC  L     G+++H    K GF  + F 
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFV 252

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             SL++MY++ G    A   F ++P R + SW+AMI GL Q+G   +AL +  +M  +G+
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312

Query: 497 LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             N +T+VS+L  C   G ++ A   H   +  K G++        +I++  + G  ++A
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVI--KHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 556 MELVDTMPFQANASVWGALLGA 577
            +    M F  +   W +++ A
Sbjct: 371 RKAFQQM-FITDVVSWNSIIAA 391


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 306/789 (38%), Positives = 472/789 (59%), Gaps = 19/789 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +LKA    +D+ LG Q+H  V   G+  D   VAN+LV +Y KCG+F    ++FD I ER
Sbjct: 99  LLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 158

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG---SGDSLLGR 116
           + VSWNSL S     +  E A+  F+ M+   + P+ F+L S+  AC+        L+G+
Sbjct: 159 NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGK 218

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H Y ++ G + + F  N LV MY K+G L  +  +    E  D+V+WN V++    +E
Sbjct: 219 QVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNE 277

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVG 235
               AL+  ++M    + P+ FT +S L AC+ +E+   G++LH   +K   +  +  VG
Sbjct: 278 QFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 337

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GV 294
             LVDMY  C  +     +F  M ++ +  WN +I+G+ QN  D EA  LF  M    G+
Sbjct: 338 SALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGL 397

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             + TT++ V+ +     A    + +H   VK   + D ++ N+L+D Y + G ++ A +
Sbjct: 398 LANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKR 457

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-----------INPDSFVCS 403
           IF +    DLV   ++IT Y      E+AL +  +MQ  E           + P+S    
Sbjct: 458 IFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLM 517

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           ++L +CA LSA  +GK++H + IK    +D   G++LV+MYAKCG +  + + F +IP R
Sbjct: 518 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR 577

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +++W+ ++     HG  ++A+ M   M+  GV PN +T +SV  AC+H+G+V E    F
Sbjct: 578 NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIF 637

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVWGALLGAARIYK 582
            +M+K +G++P  +HYAC++D+LGRAG+ +EA +L++ +P   + A  W +LLGA RI+ 
Sbjct: 638 YNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHN 697

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N+E+G+ AA+ L  +EP  +S +VLL+NIY+SAG+W    +VRR MK   ++KEPG SWI
Sbjct: 698 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWI 757

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E  D+V+ F  GD SH +S+++   L+ + + + K GY+P     LH+VEE EKE LL  
Sbjct: 758 EHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCG 817

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFG++ T PG  IRV KNLR+C DCH + +FISK+V REII+RDV RFHHF+N
Sbjct: 818 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKN 877

Query: 763 GSCSCGGYW 771
           G+CSCG YW
Sbjct: 878 GTCSCGDYW 886



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/550 (28%), Positives = 280/550 (50%), Gaps = 27/550 (4%)

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           W  L    V  + L EAV  + +M++ GI+P+ F+  +++ A A   D  LG++IH +  
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 124 KLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           K GY  D  + AN LV++Y K G+      VF  I   + VSWN++I+     E  + AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLHC-SLIKMEIKSDPIVGVGL 238
           + F+ M   ++ P+ FT  S   AC+   + E   +G+Q+H   L K E+ S   +   L
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNS--FIINTL 238

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V MY K G +  ++++      ++L+ WN V+S   QN   +EA      M  EGV  D 
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T+S+VL + +  + +   K++HA ++K  + + + ++ ++L+D Y  C  V    ++F 
Sbjct: 299 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFD 358

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYE 416
                 +    +MIT YAQ    EEAL L++EM++   +  +S   + ++ AC    A+ 
Sbjct: 359 GMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFS 418

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           + + +H  ++K G   D F  N+L++MY++ G ID A R F ++ DR +V+W+ +I G  
Sbjct: 419 KKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478

Query: 477 QHGRGKEALQMFGQM--LED---------GVLPNHITLVSVLCACNHAGLVAEAKH-HFE 524
              R ++AL M  +M  LE           + PN ITL+++L +C     +A+ K  H  
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
           +++            + ++D+  + G  Q + ++ D +P + N   W  ++ A  ++ N 
Sbjct: 539 AIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN- 594

Query: 585 EVGQHAAEML 594
              Q A +ML
Sbjct: 595 --SQDAIDML 602


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 303/774 (39%), Positives = 456/774 (58%), Gaps = 7/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK   +  D   G Q+H   +  GF  D  V  SLV  Y K  NF D R++FD + ER+
Sbjct: 99  VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L S Y      +E +  F  M   G +PN F+ ++ +   A  G    G ++H 
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G D  +  +N+L+++Y K GN+  A  +F   E   +V+WN++I+G   +  +  
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F  M+ + +  +  ++ S +K CA ++      QLHCS++K     D  +   L+ 
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338

Query: 241 MYAKCGSM-DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            Y+KC +M D  R+   +    N+++W  +ISG LQN G  EA  LF  M R+GV  ++ 
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S +L ++          +VHA  VKT +E    +  +L+DAY K G VE+A K+F   
Sbjct: 399 TYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQG 418
              D+VA ++M+  YAQ G  E A+K++ E+    I P+ F  SS+LN CA  +A   QG
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ H   IK    S     ++L+ MYAK G+I+ A+  F    ++ +VSW++MI G AQH
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQH 574

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G+  +AL +F +M +  V  + +T + V  AC HAGLV E + +F+ M +   I P +EH
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+  RAG+ ++AM++++ MP  A +++W  +L A R++K  E+G+ AAE + A++
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 694

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PE S+ +VLLSN+YA +G W   AKVR+ M +  +KKEPG SWIEVK+K Y+F  GDRSH
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
               +IY KL+++S  L   GY P     L D+++  KE +L  HSE+LA+AFGLIATP 
Sbjct: 755 PLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPK 814

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
           G+ + + KNLR+C DCH   + I+KI  REI+VRD NRFHHF  +G CSCG +W
Sbjct: 815 GSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 164/539 (30%), Positives = 279/539 (51%), Gaps = 23/539 (4%)

Query: 33  ANSLVVMYAKCGNFIDSRRL------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           AN +  +   C   + S RL      FD  P R   S+ SL   +      +EA   F  
Sbjct: 24  ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           +   G+  +    SS++   A   D L GR++H   IK G+  D+    +LVD Y K  N
Sbjct: 84  IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
            +D   VF +++  ++V+W  +I+G   +  ND  L LF +M++    PN FT+ +AL  
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
            A   +   G Q+H  ++K  +     V   L+++Y KCG++ +AR++F     K+++ W
Sbjct: 204 LAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +ISG+  NG D+EA  +F  M    V   +++ ++V+K  A+ + +   +Q+H   VK
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALK 385
             F  D  I  +L+ AY KC  + DA+++FKE   V ++V+ T+MI+ + Q    EEA+ 
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L+ EM+ + + P+ F  S +L A   +S  E    VH  ++K  +   +  G +L++ Y 
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYV 439

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           K G +++A + FS I D+ IV+WSAM+ G AQ G  + A++MFG++ + G+ PN  T  S
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499

Query: 506 VL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC----MIDILGRAGKFQEAMEL 558
           +L  CA  +A +    + H       F I+   +   C    ++ +  + G  + A E+
Sbjct: 500 ILNVCAATNASMGQGKQFH------GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 292/771 (37%), Positives = 459/771 (59%), Gaps = 4/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CTS K+L    Q+  +++  GF ++      L+ ++ K  +  ++ R+F+ +  + 
Sbjct: 50  LLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V ++++   Y     L +AV F++ M    + P  +  + ++     + D   GR+IHG
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I  G+ S++F+  A+V++YAK   +EDA  +F+ +   D+VSWN V+AG   +     
Sbjct: 167 MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARR 226

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+++  QM+ +   P+  T  S L A A ++   +GR +H    +   +    V   ++D
Sbjct: 227 AVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLD 286

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KCGS+  AR++F  M  +N+++WN +I G+ QNG   EA + F  M  EGV     +
Sbjct: 287 TYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVS 346

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +   L + A+   +   + VH L  +     D  ++NSLI  Y KC  V+ A  +F    
Sbjct: 347 MMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLK 406

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V   +MI  YAQ G   EAL L+ EMQ  +I PDSF   S++ A A+LS   Q K 
Sbjct: 407 HKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKW 466

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   I+     + F   +L++ +AKCG+I  A + F  + +R +++W+AMI G   +G 
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGH 526

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+EAL +F +M    V PN IT +SV+ AC+H+GLV E  ++FESM++ +G++P  +HY 
Sbjct: 527 GREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYG 586

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRAG+  +A + +  MP +   +V GA+LGA RI+KNVE+G+  A+ LF ++P+
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPD 646

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               HVLL+N+YASA MWD VA+VR  M+   ++K PG S +E++++V+TF  G  +H +
Sbjct: 647 DGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQ 706

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           SK IYA L+ + D +  AGYVP   + +HDVEE  KEQLL  HSE+LA+AFGL+ T  G 
Sbjct: 707 SKRIYAYLETLGDEMKAAGYVPDTNS-IHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGT 765

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I ++KNLR+C DCH + ++IS +  REIIVRD+ RFHHF+NG CSCG YW
Sbjct: 766 AIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 463/771 (60%), Gaps = 5/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CTSKK+L+   Q+   ++  GF ++      ++ ++ K G+  ++ R+F+ +  + 
Sbjct: 53  LLENCTSKKELY---QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V ++ +   Y     L +A+CFF  M+   +R      + ++  C  + D   GR+IHG
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHG 169

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I  G++S++F   A++ +YAK   +++A  +F+ ++H D+VSW  ++AG   + H   
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  QM+ +   P+  T  S L A A M+   +GR +H    +   +S   V   L+D
Sbjct: 230 ALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLD 289

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS   AR++F  M  K +++WN +I G  QNG   EA + F  M  EG    + T
Sbjct: 290 MYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVT 349

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +  VL + A+   +     VH L  K   +S+  ++NSLI  Y KC  V+ A  IF    
Sbjct: 350 MMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE 409

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             + V   +MI  YAQ G  +EAL L+  MQ + I  D F    ++ A A+ S   Q K 
Sbjct: 410 KTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKW 468

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   ++    ++ F   +LV+MYAKCG+I  A + F  + +R +++W+AMI G   HG 
Sbjct: 469 IHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGV 528

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKE L +F +M +  V PN IT +SV+ AC+H+G V E    F+SM++ + ++P  +HY+
Sbjct: 529 GKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYS 588

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRAG+  +A   +  MP +   SV GA+LGA +I+KNVE+G+ AA+ LF ++P+
Sbjct: 589 AMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPD 648

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           +   HVLL+NIYAS  MWD VAKVR  M+D  L K PG SW+E++++++TF  G  +H  
Sbjct: 649 EGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPE 708

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           SK+IYA L+ + D +  AGYVP  ++ +HDVEE  K+QLL  HSE+LA+AFGL+ T PG 
Sbjct: 709 SKKIYAFLETLGDEIKAAGYVPDPDS-IHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGT 767

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+ ++KNLR+C DCH + ++IS +  REIIVRD+ RFHHF+NGSCSCG YW
Sbjct: 768 TLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/773 (38%), Positives = 466/773 (60%), Gaps = 2/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG--FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +L+ C ++ D   G  VH  VV  G     D F AN L+ +YAK G    +RRLFD +PE
Sbjct: 53  LLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPE 112

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R++VS+ +L   Y      EEA   F+ +   G   N F L++++          L   I
Sbjct: 113 RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCI 172

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  + KLG+D + F  ++L+D Y+  G +  A  VF  I   D V+W A+++    ++  
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIP 232

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + AL  F +M+ +   PN F  TS LKA   +    LG+ +H   +K    ++P VG  L
Sbjct: 233 EDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGAL 292

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKCG +++AR +F ++P  ++I W+ +IS + Q+  + +A  +F  M R  V  ++
Sbjct: 293 LDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNE 352

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            +LS VL++ A+   + + +Q+H L +K  +ES+ ++ N+L+D Y KC ++E++++IF+ 
Sbjct: 353 FSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRS 412

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               + V+  ++I  Y Q G  E+AL ++ EM+   +       SS+L ACAN ++ +  
Sbjct: 413 LRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHT 472

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            Q+H  I K  F +DT   NSL++ YAKCG I DA + F  I    +VSW+A+I G A H
Sbjct: 473 VQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALH 532

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GR  +AL++F +M +    PN +T V++L  C   GLV +    F SM     I+P  +H
Sbjct: 533 GRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDH 592

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y C++ +LGRAG+  +A++ +  +P   +  VW ALL +  ++KNV +G+ +AE +  IE
Sbjct: 593 YTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIE 652

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+  +T+VLLSN+YA+AG+ D VA +R+ M++  +KKE G+SW+E+K +V+ F+VG   H
Sbjct: 653 PQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADH 712

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
              + I A L+ ++   ++ GYVP +   LHDV+E EK ++L+ HSE+LA+A+GL  TPP
Sbjct: 713 PDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPP 772

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  IR+ KNLR C+DCHT F+ ISKIV REI+VRD+NRFHHF  G CSCG YW
Sbjct: 773 GHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 255/486 (52%), Gaps = 10/486 (2%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLG--YDSDMFSANALVDMYAKVGNLEDAVA 152
           + ++ + ++  C   GD+  GR +H   ++ G     D F AN L+++YAK+G L  A  
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +   ++VS+  ++ G  L    + A  LF++++      N F  T+ LK    M+ 
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             L   +H    K+    +  VG  L+D Y+ CG++  AR +F  +  K+ + W  ++S 
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + +N    +A + F  M   G   +   L++VLK+     +  + K +H  +VKT  +++
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTE 285

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +L+D Y KCG++EDA  +F+     D++  + +I+ YAQ    E+A +++L M  
Sbjct: 286 PHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMR 345

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P+ F  S +L ACAN++  + G+Q+H  +IK G+ S+ F GN+L+++YAKC ++++
Sbjct: 346 SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMEN 405

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-N 511
           +   F  + D   VSW+ +I G  Q G  ++AL +F +M    VL   +T  SVL AC N
Sbjct: 406 SLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACAN 465

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANAS 569
            A +    + H    +  F      +   C  +ID   + G  ++A+++ +++  Q +  
Sbjct: 466 TASIKHTVQIHSLIEKSTFN----NDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVV 520

Query: 570 VWGALL 575
            W A++
Sbjct: 521 SWNAII 526


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/771 (38%), Positives = 461/771 (59%), Gaps = 4/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CTS K+L    Q   +++  G  S+      LV ++ K G+  ++ R+F  I ++ 
Sbjct: 83  LLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
              ++++   Y     L++AV FF  M   G+RP  ++ + ++  C  + D   G++IH 
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I  G+ S++F+   +V+MYAK   +E+A  +F  +   D+V WN +I+G   +     
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  +M+     P+  T  S L A A +    +GR +H   ++   +S   V   LVD
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCGS+  AR+IF  M  K +++WN +I G++QNG    A  +F  M  E V     T
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +   L + A    +   + VH L  +    SD  ++NSLI  Y KC  V+ A +IF+   
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ 439

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              LV+  +MI  YAQ G   EA+  + +MQ + I PDSF   S++ A A LS   Q K 
Sbjct: 440 HKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKW 499

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +I+     + F   +LV+MYAKCG++  A + F  + +R + +W+AMI G   HG 
Sbjct: 500 IHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGL 559

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK AL++F +M ++ + PN +T + VL AC+H+GLV E   +F SM+K +G++P  +HY 
Sbjct: 560 GKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYG 619

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRA +  EA + +  MP +   SV+GA+LGA RI+KNVE+G+ AA  +F ++P+
Sbjct: 620 AMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPD 679

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               HVLL+NIYA+A MWD VA+VR  M+   ++K PG S +E++++V+TF  G  SH +
Sbjct: 680 DGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQ 739

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           +K+IYA L+ + + +  AGY+P   + +HDVE+  KEQLL  HSEKLA+AF L+ T PG 
Sbjct: 740 AKKIYAFLETLGNRIKAAGYMPDTNS-VHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGT 798

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TI ++KNLR+C DCH + ++IS +  REIIVRD+ RFHHF++G+CSCG YW
Sbjct: 799 TIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 295/758 (38%), Positives = 463/758 (61%), Gaps = 7/758 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H ++V  G     F++  LV +YA  G+   SR  FD IP++ V +WNS+ S YVH   
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 77  LEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EA+ CF++ +++S IRP+ ++   ++ AC   G  + GR+IH ++ KLG+  ++F A 
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAA 254

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ MY++ G    A ++F D+   D+ SWNA+I+G + + +   AL +  +M+   I  
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N  T  S L  C  +        +H  +IK  ++ D  V   L++MYAK G++++AR  F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M   ++++WN +I+ + QN   + A   F  M   G   D  TL ++   VA  +   
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 316 VCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
             + VH   ++  +  +D ++ N+++D Y K G ++ A K+F+     D+++  ++IT Y
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494

Query: 375 AQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           AQ GL  EA+++Y  M++ +EI P+     S+L A A++ A +QG ++H  +IK     D
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLD 554

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F    L+++Y KCG + DA   F ++P    V+W+A+I     HG  ++ L++FG+ML+
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           +GV P+H+T VS+L AC+H+G V E K  F  M++ +GI+P  +HY CM+D+LGRAG  +
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLE 673

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A   +  MP Q +AS+WGALLGA RI+ N+E+G+ A++ LF ++ +    +VLLSNIYA
Sbjct: 674 MAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYA 733

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           + G W+ V KVR   ++  LKK PG S IEV  KV  F  G++SH + KEIY +L  ++ 
Sbjct: 734 NVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            +   GY+P     L DVEE EKE +L  HSE+LA+AFG+I+TPP + IR+ KNLR+C D
Sbjct: 794 KMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGD 853

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CH + +FIS+I  REI+VRD NRFHHF++G CSCG YW
Sbjct: 854 CHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 253/485 (52%), Gaps = 12/485 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC +  D   G ++H      GF  + FVA SL+ MY++ G    +R LFD +P R 
Sbjct: 224 VLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRD 280

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN++ S  +      +A+    EM L GI+ N  ++ S++  C   GD      IH 
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND- 179
           Y IK G + D+F +NAL++MYAK GNLEDA   F+ +   D+VSWN++IA    +E ND 
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAA---YEQNDD 397

Query: 180 --WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGV 236
              A   F +M+ +   P++ T  S     A     +  R +H  +++   +  D ++G 
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN 457

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVG 295
            +VDMYAK G +D A  +F ++  K++I+WN +I+G+ QNG   EA  ++  M   + + 
Sbjct: 458 AVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEII 517

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +Q T  ++L + A   A+    ++H   +KT    D ++   LID YGKCG + DA+ +
Sbjct: 518 PNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSL 577

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F +      V   ++I+ +   G  E+ LKL+ EM D  + PD     SLL+AC++    
Sbjct: 578 FYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 637

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGG 474
           E+GK     + ++G          +V++  + G ++ A     ++P +   S W A++G 
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGA 697

Query: 475 LAQHG 479
              HG
Sbjct: 698 CRIHG 702



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K +HAL V        +I   L++ Y   G V  +   F +    D+    SMI+AY   
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195

Query: 378 GLGEEALKLYLE-MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
           G   EA+  + + +   EI PD +    +L AC  L     G+++H    K GF  + F 
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRRIHCWAFKLGFQWNVFV 252

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             SL++MY++ G    A   F ++P R + SW+AMI GL Q+G   +AL +  +M  +G+
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312

Query: 497 LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             N +T+VS+L  C   G ++ A   H   +  K G++        +I++  + G  ++A
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVI--KHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 556 MELVDTMPFQANASVWGALLGA 577
            +    M F  +   W +++ A
Sbjct: 371 RKAFQQM-FITDVVSWNSIIAA 391


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/716 (40%), Positives = 445/716 (62%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           +P+R+ VS+ +L   YV    L+E V  F  +   G   N F  ++++        + L 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
             +H    KLG++S+ F   AL+D YA  G++  A   F  I   D+VSW  ++A    +
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +    +L+LF +M+    NPN FT+   LKAC G+E   +G+ +H  ++K   + D  VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
           VGL+D+Y K G  ++   +F  MP+ ++I W+ +IS + Q+    EA  LF  M R  V 
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +Q T ++VL+S AS + + + KQVH   +K   + + ++ N+L+D Y KCG +++++K+
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F E    + V   +MI  Y Q G G++AL LY  M + ++       SS+L ACA+L+A 
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E G Q+H   +K  +  D   GN+L++MYAKCGSI +A   F  + +R  +SW+AMI G 
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           + HG   EAL+ F  M E   +PN +T VS+L AC++AGL+   +++F+SM + +GI+P 
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+ +LGR+G   +A++L++ +P + N  VW ALLGA  I+ +V++G  +A+ + 
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            I+P+  +THVLLSNIYA    W++VA VR+FMK+  +KKEPG+SWIE +  V+ F+VGD
Sbjct: 541 QIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            SH   K I   L+ ++    KAGYVP +   L DVE+ EK++ L+ HSE+LA+AFGLI 
Sbjct: 601 TSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIR 660

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TP    IR+ KNLRIC DCH++ + ISKIV R+II+RD+NRFHHF++G CSCG YW
Sbjct: 661 TPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 152/480 (31%), Positives = 270/480 (56%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK   S +   L   +H  +   G +S+ FV  +L+  YA CG+   +R+ FDAI  + 
Sbjct: 47  ILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKD 106

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + +CY   D  ++++  F EM + G  PN F+ + ++ AC G     +G+ +HG
Sbjct: 107 MVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHG 166

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K  Y+ D++    L+D+Y K G+  D + VF+++   D++ W+ +I+       +  
Sbjct: 167 CVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSRE 226

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++LF QM+ + + PN FT+ S L++CA +E  +LG+Q+HC ++K+ +  +  V   L+D
Sbjct: 227 AVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMD 286

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG +D +  +F  +P +N + WN +I G++Q+G   +A SL+  M    V   + T
Sbjct: 287 VYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVT 346

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+VL++ AS  A+ +  Q+H+LS+KT ++ D  + N+LID Y KCG +++A  +F   S
Sbjct: 347 YSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLS 406

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D ++  +MI+ Y+  GL  EALK +  MQ+ E  P+     S+L+AC+N    + G+ 
Sbjct: 407 ERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQN 466

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               +++ +G          +V +  + G +D A +   EIP +  +  W A++G    H
Sbjct: 467 YFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/772 (39%), Positives = 459/772 (59%), Gaps = 6/772 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK C    D  +G QVH   + +GF  D  V  SLV MY K  +F D R +FD +  ++V
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW SL S Y      +E +    +M + G+ PN F+ ++++ A A       G ++H  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +K G++   F  NAL+ MY K   + DA AVF  +   D V+WN +I G          
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            ++F +M+ + +  +   + +ALK C+        +QLHC ++K   +    +   L+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 242 YAKCGSMDEARMIFHLM-PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           Y+KC S+DEA  +F +     N++ W  +I G +QN  + +A  LF  M REGV  +  T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFT 410

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            STVL    S     +  Q+HA  +K  +E    +  +L+DAY K G+V ++ ++F    
Sbjct: 411 YSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQGK 419
           A D+VA ++M+T  AQ    E+A+++++++    + P+ +  SS++NAC++ +A  E GK
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   +K G  +     ++L+ MY+K G+I+ A++ F+   +R IVSW++MI G  QHG
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             K+AL++F  M   G+  + +T + VL AC HAGLV E + +F  M K + I    EHY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY 646

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           +CM+D+  RAG F +AM++++ MPF A+ ++W  LL A R+++N+E+G+ AAE L +++P
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             +  +VLLSNI+A AG W+  A VR+ M + K+KKE G SWIE+K+++++F  GD SH 
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            S  +YAKL+E+S  L   GY P      HDVEE  KE +L  HSE+LA+A+GLIA PPG
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           A I+++KNLRIC DCH   E IS I  R +IVRD NRFHHF+ G CSCGGYW
Sbjct: 827 APIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 168/622 (27%), Positives = 294/622 (47%), Gaps = 59/622 (9%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           + +LFD  P + +  +N L   +   +   EA+  FK++  SG+  +  +LS  +  C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
             D ++GR++H  S+K G+  D+    +LVDMY K  + ED   +F ++   ++VSW ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           ++G   +  ND  + L  QM+   +NPN FT+ + L A A   + E G Q+H  ++K   
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
           +    V   L+ MY K   + +A  +F  M  ++ + WNI+I G+   G  +E   +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M   GV   +T   T LK  +  + +   KQ+H   VK  +E    I  +L+  Y KC  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 349 VEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL- 406
           V++A K+F  + A  ++V  T+MI  + Q    ++A+ L+ +M    + P+ F  S++L 
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 407 -NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               + LS      Q+H  IIK  +        +L++ Y K G++ ++ R F  IP + I
Sbjct: 417 GKPSSLLS------QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE------- 518
           V+WSAM+ GLAQ    ++A+++F Q++++GV PN  T  SV+ AC+ +    E       
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 519 ----------------------AKHHFESMEKKFGIQPMQE--HYACMIDILGRAGKFQE 554
                                  K + ES EK F  Q  ++   +  MI   G+ G  ++
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKK 590

Query: 555 AMELVDTMPFQA------------NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           A+E+   M  Q              A     L+     Y N+ +  +  +       +K 
Sbjct: 591 ALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID-------KKX 643

Query: 603 STHVLLSNIYASAGMWDNVAKV 624
             +  + ++Y+ AGM+D    +
Sbjct: 644 EHYSCMVDLYSRAGMFDKAMDI 665



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 242/465 (52%), Gaps = 9/465 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A   +  +  G+QVH ++V  GF+   FV N+L+ MY K     D+  +FD++  R 
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WN +   Y    F  E    F  M L+G++ +     + +  C+   +    +++H 
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHN 178
             +K GY+       AL+  Y+K  ++++A  +F   D  H ++V+W A+I G V + +N
Sbjct: 331 GVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNN 389

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF QM    + PN FTY++ L      +   L  QLH  +IK   +  P V   L
Sbjct: 390 KKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATAL 445

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y K G++ E+  +F+ +P K+++AW+ +++G  Q     +A  +F  + +EGV  ++
Sbjct: 446 LDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNE 505

Query: 299 TTLSTVLKSVASFQA-IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T S+V+ + +S  A +   KQ+HA +VK+   +   + ++L+  Y K G++E A K+F 
Sbjct: 506 YTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFT 565

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                D+V+  SMIT Y Q G  ++AL+++  MQ++ +  D      +L AC +    E+
Sbjct: 566 RQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEE 625

Query: 418 GKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP 461
           G++    +IK   +       S +V++Y++ G  D A    + +P
Sbjct: 626 GEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMP 670


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 303/774 (39%), Positives = 451/774 (58%), Gaps = 7/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK   +  D   G Q+H   +  GF  D  V  SLV  Y K  NF D R +FD + ER+
Sbjct: 103 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERN 162

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L S Y      EE +  F  M   G +PN F+ ++ +   A  G    G ++H 
Sbjct: 163 VVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 222

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G D  +  +N+L+++Y K GN+  A  +F   E   +V+WN++I+G   +  +  
Sbjct: 223 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 282

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F  M+ + +  +  ++ S +K CA ++      QLHCS++K     D  +   L+ 
Sbjct: 283 ALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMV 342

Query: 241 MYAKCGSM-DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            Y+KC +M D  R+        N+++W  +ISG LQN G  EA  LF  M R+GV  ++ 
Sbjct: 343 AYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEF 402

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S +L ++          +VHA  VKT +E    +  +L+DAY K G V++A K+F   
Sbjct: 403 TYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGI 458

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQG 418
              D+VA ++M+  YAQ G  E A+K++ E+    + P+ F  SS+LN CA  +A   QG
Sbjct: 459 DNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQG 518

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ H   IK    S     ++L+ MYAK G I+ A+  F    ++ +VSW++MI G AQH
Sbjct: 519 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQH 578

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G+  +AL +F +M +  V  + +T + V  AC HAGLV E + +F+ M +   I P +EH
Sbjct: 579 GQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 638

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+  RAG+ ++AM+++D MP  A +++W  +L A R++K  E+G+ AAE + A+ 
Sbjct: 639 NSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMI 698

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PE S+ +VLLSN+YA +G W   AKVR+ M +  +KKEPG SWIEVK+K Y F  GDRSH
Sbjct: 699 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSH 758

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
               +IY KL+++S  L   GY P     L D+++  KE +L  HSE+LA+AFGLIATP 
Sbjct: 759 PLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPK 818

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
           G+ + + KNLR+C DCH   + I+KI  REI+VRD NRFHHF  +G CSCG +W
Sbjct: 819 GSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 251/460 (54%), Gaps = 5/460 (1%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           LFD  P+R   S+ SL   +      +EA   F  +   G+  +    SS++   A   D
Sbjct: 53  LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
            L GR++H   IK G+  D+    +LVD Y K  N +D   VF +++  ++V+W  +I+G
Sbjct: 113 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISG 172

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
              +  N+  L LF +M+     PN FT+ +AL   A   +   G Q+H  ++K  +   
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             V   L+++Y KCG++ +AR++F     K+++ WN +ISG+  NG D+EA  +F  M  
Sbjct: 233 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 292

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
             V   +++ ++++K  A+ + +   +Q+H   VK  F  D  I  +L+ AY KC  + D
Sbjct: 293 NHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLD 352

Query: 352 AVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           A+++FKE+  + ++V+ T+MI+ + Q    EEA+ L+ EM+ + + P+ F  S +L A  
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
            +S  E    VH  ++K  +   +  G +L++ Y K G +D+A + FS I ++ IV+WSA
Sbjct: 413 VISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSA 468

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           M+ G AQ G  + A+++F ++ + GV PN  T  S+L  C
Sbjct: 469 MLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/771 (38%), Positives = 459/771 (59%), Gaps = 4/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CTS K+L    Q+  +V+  G  ++      LV +++K G+  ++ R+F+ I ++ 
Sbjct: 55  LLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
              ++++   Y     LE A+ F   M    ++P  ++ + ++  C  + D   G++IHG
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I   + +++F+   +V+MYAK   ++DA  +F  +   D+VSWN +IAG   +     
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  +M+     P+  T  + L A A + L  +G+ +H   I+        +   L D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCGS++ AR+IF  M +K +++WN ++ G++QNG   +A ++F  M  EG+     T
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +   L + A    +   K VH    +    SD  ++NSLI  Y KC  V+ A  IF   +
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V+  +MI  YAQ G   EAL  + EM+   + PDSF   S++ A A LS     K 
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  II+     + F   +LV+MY+KCG+I  A + F  I DR +++W+AMI G   HG 
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+ AL +F +M +  V PN IT +SV+ AC+H+GLV E   HF+SM++ +G++P  +HY 
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRAG+ +EA + ++ MP     +V+GA+LGA +I+KN+EVG+ AA+ LF + P+
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPD 651

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           +   HVLL+NIYAS   W  VA+VR+ M+   LKK PG S +E++++V++F  G  +H +
Sbjct: 652 EGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQ 711

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           SK IYA L+E+   +  AGYVP     L DVE+  +EQLL  HSEKLA+AFGL+ T PG 
Sbjct: 712 SKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGT 770

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TI V+KNLR+C DCH + ++IS +  REIIVRD+ RFHHF+NG CSCG YW
Sbjct: 771 TIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/772 (39%), Positives = 459/772 (59%), Gaps = 6/772 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK C    D  +G QVH   + +GF  D  V  SLV MY K  +F D R +FD +  ++V
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW SL S Y      +E +    +M + G+ PN F+ ++++ A A       G ++H  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +K G++   F  NAL+ MY K   + DA AVF  +   D V+WN +I G          
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            ++F +M+ + +  +   + +ALK C+        +QLHC ++K   +    +   L+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 242 YAKCGSMDEARMIFHLM-PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           Y+KC S+DEA  +F +     N++ W  +I G +QN  + +A  LF  M REGV  +  T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFT 410

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            STVL    S     +  Q+HA  +K  +E    +  +L+DAY K G+V ++ ++F    
Sbjct: 411 YSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQGK 419
           A D+VA ++M+T  AQ    E+A+++++++    + P+ +  SS++NAC++ +A  E GK
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   +K G  +     ++L+ MY+K G+I+ A++ F+   +R IVSW++MI G  QHG
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             K+AL++F  M   G+  + +T + VL AC HAGLV E + +F  M K + I    EHY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY 646

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           +CM+D+  RAG F +AM++++ MPF A+ ++W  LL A R+++N+E+G+ AAE L +++P
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             +  +VLLSNI+A AG W+  A VR+ M + K+KKE G SWIE+K+++++F  GD SH 
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            S  +YAKL+E+S  L   GY P      HDVEE  KE +L  HSE+LA+A+GLIA PPG
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           A I+++KNLRIC DCH   E IS I  R +IVRD NRFHHF+ G CSCGGYW
Sbjct: 827 APIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 294/622 (47%), Gaps = 59/622 (9%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           + +LFD  P + +  +N L   +   +   EA+  FK++  SG+  +  +LS  +  C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
             D ++GR++H  S+K G+  D+    +LVDMY K  + ED   +F ++   ++VSW ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           ++G   +  ND  + L  QM+   +NPN FT+ + L A A   + E G Q+H  ++K   
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
           +    V   L+ MY K   + +A  +F  M  ++ + WNI+I G+   G  +E   +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M   GV   +T   T LK  +  + +   KQ+H   VK  +E    I  +L+  Y KC  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 349 VEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL- 406
           V++A K+F  + A  ++V  T+MI  + Q    E+A+ L+ +M    + P+ F  S++L 
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 407 -NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               + LS      Q+H  IIK  +        +L++ Y K G++ ++ R F  IP + I
Sbjct: 417 GKPSSLLS------QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE------- 518
           V+WSAM+ GLAQ    ++A+++F Q++++GV PN  T  SV+ AC+ +    E       
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 519 ----------------------AKHHFESMEKKFGIQPMQE--HYACMIDILGRAGKFQE 554
                                  K + ES EK F  Q  ++   +  MI   G+ G  ++
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKK 590

Query: 555 AMELVDTMPFQA------------NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           A+E+   M  Q              A     L+     Y N+ +  +  +       +K 
Sbjct: 591 ALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID-------KKI 643

Query: 603 STHVLLSNIYASAGMWDNVAKV 624
             +  + ++Y+ AGM+D    +
Sbjct: 644 EHYSCMVDLYSRAGMFDKAMDI 665



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 243/465 (52%), Gaps = 9/465 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A   +  +  G+QVH ++V  GF+   FV N+L+ MY K     D+  +FD++  R 
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WN +   Y    F  E    F  M L+G++ +     + +  C+   +    +++H 
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHN 178
             +K GY+       AL+  Y+K  ++++A  +F   D  H ++V+W A+I G V + +N
Sbjct: 331 GVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNN 389

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A+ LF QM    + PN FTY++ L      +   L  QLH  +IK   +  P V   L
Sbjct: 390 EKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATAL 445

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y K G++ E+  +F+ +P K+++AW+ +++G  Q     +A  +F  + +EGV  ++
Sbjct: 446 LDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNE 505

Query: 299 TTLSTVLKSVASFQA-IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T S+V+ + +S  A +   KQ+HA +VK+   +   + ++L+  Y K G++E A K+F 
Sbjct: 506 YTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFT 565

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                D+V+  SMIT Y Q G  ++AL+++  MQ++ +  D      +L AC +    E+
Sbjct: 566 RQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEE 625

Query: 418 GKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP 461
           G++    +IK   +       S +V++Y++ G  D A    + +P
Sbjct: 626 GEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMP 670


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/720 (41%), Positives = 448/720 (62%), Gaps = 4/720 (0%)

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           DA     ++S N + S Y+H       +  F +MV S +  ++ +   ++ A A   DSL
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFI-LVLATAVRLDSL 338

Query: 114 -LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            LG+++H  ++KLG D  +  +N+L++MY K+  +  A  VF ++   D++SWN+VIAG 
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSD 231
              +    A+ LF Q+    + P+ +T TS LKA + + E   L +Q+H   IK    +D
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             V   L+D Y++   M EA ++F      +L+AWN ++SG+ Q+    +   LF  M++
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHK 517

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           +G   D  TL+TVLK+     AI   KQVHA ++K+ ++ D ++ + ++D Y KCG +  
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 577

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A   F      D VA T++I+   + G  E AL ++ +M+   + PD F  ++L  A + 
Sbjct: 578 AQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSC 637

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L+A EQG+Q+H + +K    SD F G SLV+MYAKCGSIDDA   F  I    I +W+AM
Sbjct: 638 LTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 697

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           + GLAQHG GKEALQ+F QM   G+ P+ +T + VL AC+H+GLV+EA  +  SM + +G
Sbjct: 698 LVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYG 757

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I+P  EHY+C+ D LGRAG  +EA  L+D+M  +A+AS++  LL A R+  + E G+  A
Sbjct: 758 IKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVA 817

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             L  +EP  SS +VLLSN+YA+A  WD +   R  MK +K+KK+PG SWIEVK+K++ F
Sbjct: 818 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLF 877

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
            V DRS+ +++ IY K+ ++   + + GYVP  +  L DVEE EKE+ LY+HSEKLAVAF
Sbjct: 878 VVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAF 937

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GL++TPP   IRV KNLR+C DCH + ++ISK+  REI++RD NRFH F++G CSCG YW
Sbjct: 938 GLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 182/640 (28%), Positives = 308/640 (48%), Gaps = 40/640 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C     +      HG     G D D+FVA +LV +Y K G   + R LF+ +P R 
Sbjct: 158 MLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRD 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WN +   Y+   F EEA+        SG+ PNE +L  +      SGD     ++  
Sbjct: 218 VVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRI---SGDDSEAGQVKS 274

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +                        N  DA AV       +I+S N +++G +       
Sbjct: 275 FE-----------------------NGNDASAV------SEIISRNKILSGYLHAGQYSA 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LK F  M  S++  +  T+   L     ++   LG+Q+HC  +K+ +     V   L++
Sbjct: 306 LLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLIN 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K   +  AR +F+ M E++LI+WN VI+G  Q+  ++EA  LF  + R G+  D  T
Sbjct: 366 MYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYT 425

Query: 301 LSTVLKSVASF-QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +++VLK+ +S  + + + KQ+H  ++KT   +D ++  +LIDAY +   +++A  +F  +
Sbjct: 426 MTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRN 485

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  DLVA  +M++ Y Q   G + L+L+  M  +    D F  +++L  C  L A  QGK
Sbjct: 486 N-FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGK 544

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           QVH + IK G+  D +  + +++MY KCG +  A  AF  IP    V+W+ +I G  ++G
Sbjct: 545 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENG 604

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
             + AL +F QM   GVLP+  T+ ++  A +    + + +  H  +++      P    
Sbjct: 605 EEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG- 663

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEM-LFA 596
              ++D+  + G   +A  L   +    N + W A+L G A+  +  E  Q   +M    
Sbjct: 664 -TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKEALQLFKQMESLG 721

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           I+P+K +   +LS    S  + +    +R   +D  +K E
Sbjct: 722 IKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPE 761



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 272/581 (46%), Gaps = 43/581 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+   S  DL LG   H  ++    + + F+ N+L+ MY+KCG+   +RR+FD +PER +
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 62  VSWNSLFSCYVH-----CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           VSWNS+ + Y        + ++EA   F+ +    +  +  +LS M+  C  SG      
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASE 172

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
             HGY+ K+G D D F A ALV++Y K G +++   +F+++ + D+V WN ++   +   
Sbjct: 173 SFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMG 232

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + A+ L     +S ++PN  T            L+ L R          I  D     
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEIT------------LRLLSR----------ISGDD---- 266

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                 ++ G +              +I+ N ++SG+L  G        F  M    +  
Sbjct: 267 ------SEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLEC 320

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           DQ T   VL +     ++ + +QVH +++K   +    + NSLI+ Y K   +  A  +F
Sbjct: 321 DQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF 380

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL-SAY 415
              S  DL++  S+I   AQ  L  EA+ L++++    + PD +  +S+L A ++L    
Sbjct: 381 NNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGL 440

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
              KQ+HVH IK   ++D+F   +L++ Y++   + +A+  F    +  +V+W+AM+ G 
Sbjct: 441 SLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGY 499

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQP 534
            Q   G + L++F  M + G   +  TL +VL  C     + + K  H  +++  + +  
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDL 559

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                + ++D+  + G    A    D++P   + + W  L+
Sbjct: 560 WVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTLI 597



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 134/299 (44%), Gaps = 41/299 (13%)

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           C   L    + S    GK  H  I+      + F  N+L++MY+KCGS+  A R F ++P
Sbjct: 49  CFGFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMP 108

Query: 462 DRGIVSWSAMIGGLAQHGRG-----KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           +R +VSW++++   AQ   G     KEA  +F  + +D V  + +TL  +L  C H+G V
Sbjct: 109 ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
             A   F     K G+         +++I  + GK +E   L + MP++ +  +W  +L 
Sbjct: 169 C-ASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLK 226

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A              EM F  E       + LS+ + ++G+  N   +R   + +    E
Sbjct: 227 A------------YLEMGFKEEA------IDLSSAFHTSGLHPNEITLRLLSRISGDDSE 268

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY-------VPMVETDL 688
            G        +V +F  G+ + A S EI ++   +S  L+   Y       + MVE+DL
Sbjct: 269 AG--------QVKSFENGNDASAVS-EIISRNKILSGYLHAGQYSALLKCFMDMVESDL 318


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/772 (39%), Positives = 462/772 (59%), Gaps = 2/772 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTG--FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           L+ C ++ D   G  VH  VV  G     D F AN L+  YAK G    +RRLFD +PER
Sbjct: 52  LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + VS+ +L   Y      EEA+  F+ +   G   N F L++++          L   IH
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIH 171

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             + KLG+D + F   AL+D Y+  G +  A  VF  I   D V+W A+++    ++  +
Sbjct: 172 ACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPE 231

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           +AL  F +M+ +   PN F  TSALKA   +    LG+ +H   +K    ++P VG  L+
Sbjct: 232 YALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALL 291

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG +++A  IF ++P  ++I W+ +IS + Q+  + +A  +F  M R  V  ++ 
Sbjct: 292 DMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEF 351

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +LS VL++ A+   + + +Q+H L++K  +ES+ ++ N+L+D Y KC ++E++++IF   
Sbjct: 352 SLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSL 411

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+  ++I  Y Q G  E+AL ++ EM+   +       SS+L ACAN S+ +   
Sbjct: 412 QDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAV 471

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  I K  F +DT   NSL++ YAKCG I DA + F  I +  +VSW+++I   A HG
Sbjct: 472 QIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHG 531

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           R   AL++F +M +  +  N +T VS+L  C   GLV +    F SM     I+P  EHY
Sbjct: 532 RATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHY 591

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++ +LGRAG+  +A++ +  +P   +  VW ALL +  ++KNV +G++AAE +  IEP
Sbjct: 592 TCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEP 651

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
              +T+VLLSN+YA+AG+ D VA  R+ M++  +KKE G+SW+E+K +V+ F+VG   H 
Sbjct: 652 HDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHP 711

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             + I A L+ ++   ++ GYVP +   LHDV+E EK ++L+ HSE+LA+A+GL  TPPG
Sbjct: 712 DMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPG 771

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLR C+DCHT F+ ISKIV REIIVRD+NRFHHF  G CSCG YW
Sbjct: 772 HPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/484 (33%), Positives = 258/484 (53%), Gaps = 10/484 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK   +     L   +H      G D + FV  +L+  Y+ CG    +R +FD I  + 
Sbjct: 154 ILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKD 213

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ SCY   D  E A+  F +M ++G +PN F L+S + A      +LLG+ IHG
Sbjct: 214 AVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHG 273

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K  YD++     AL+DMYAK G++EDA A+F+ I H D++ W+ +I+       N+ 
Sbjct: 274 CSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQ 333

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A ++F +M  S + PN F+ +  L+ACA +   ELG Q+H   IK+  +S+  VG  L+D
Sbjct: 334 AFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMD 393

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKC +M+ +  IF  + + N ++WN +I G+ Q+G   +A S+F  M    +   Q T
Sbjct: 394 MYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVT 453

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+VL++ A+  +I    Q+H+L  K+ F +D  + NSLID Y KCG + DA+K+F+   
Sbjct: 454 FSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIV 513

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-- 418
             D+V+  S+I+AYA  G    AL+L+  M   +I  +     SLL+ C +     QG  
Sbjct: 514 ECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLW 573

Query: 419 ---KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGG 474
                +  H IK      T     +V +  + G + DA +   +IP     + W A++  
Sbjct: 574 LFNSMMMDHRIKPSMEHYT----CIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSS 629

Query: 475 LAQH 478
              H
Sbjct: 630 CVVH 633



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 252/487 (51%), Gaps = 8/487 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLG--YDSDMFSANALVDMYAKVGNLEDAVA 152
           + ++ +  +  C   GD+  GR +H   ++ G     D F AN L++ YAK+G L  A  
Sbjct: 44  DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +   + VS+  ++ G  L    + AL+LF++++      N F  T+ LK    M+ 
Sbjct: 104 LFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDA 163

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             L   +H    K+    +  VG  L+D Y+ CG++  AR +F  +  K+ + W  ++S 
Sbjct: 164 PGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSC 223

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + +N     A + F  M   G   +   L++ LK+     +  + K +H  SVKT ++++
Sbjct: 224 YSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTE 283

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +L+D Y KCG +EDA  IF+     D++  + +I+ YAQ    E+A +++L M  
Sbjct: 284 PHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMR 343

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P+ F  S +L ACAN++  E G+Q+H   IK G+ S+ F GN+L++MYAKC ++++
Sbjct: 344 SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMEN 403

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           +   FS + D   VSW+ +I G  Q G  ++AL +F +M    +L   +T  SVL AC +
Sbjct: 404 SLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACAN 463

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASV 570
              +  A      +EK        +   C  +ID   + G  ++A+++ +++  + +   
Sbjct: 464 TSSIKHAVQIHSLIEKS---TFNNDTIVCNSLIDTYAKCGFIRDALKVFESI-VECDVVS 519

Query: 571 WGALLGA 577
           W +++ A
Sbjct: 520 WNSIISA 526


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 296/771 (38%), Positives = 457/771 (59%), Gaps = 4/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CTS K+L    Q+  +V+  G  ++      LV +++K G+  ++ R+F+ I ++ 
Sbjct: 55  LLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
              ++++   Y     LE A+ F   M    ++P  ++ + ++  C  + D   G++IHG
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I   + +++F+   +V+MYAK   ++DA  +F  +   D+VSWN +IAG   +     
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  +M+     P+  T  + L A A + L  +G+ +H   I+        +   L D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCGS++ AR+IF  M +K +++WN ++ G++QNG   +A ++F  M  EG+     T
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +   L + A    +   K VH    +    SD  ++NSLI  Y KC  V+ A  IF   +
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V+  +MI  YAQ G   EAL  + EM+   + PDSF   S++ A A LS     K 
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  II+     + F   +LV+MY+KCG+I  A + F  I DR +++W+AMI G   HG 
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+ AL +F +M +  V PN IT +SV+ AC+H+GLV E   HF+SM++ +G++P  +HY 
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRAG+ +EA + ++ MP     +V+GA  GA +I+KN+EVG+ AA+ LF + P+
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPD 651

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           +   HVLL+NIYAS   W  VA+VR+ M+   LKK PG S +E++++V++F  G  +H +
Sbjct: 652 EGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQ 711

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           SK IYA L+E+   +  AGYVP     L DVE+  +EQLL  HSEKLA+AFGL+ T PG 
Sbjct: 712 SKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGT 770

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TI V+KNLR+C DCH + ++IS +  REIIVRD+ RFHHF+NG CSCG YW
Sbjct: 771 TIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 293/744 (39%), Positives = 463/744 (62%), Gaps = 5/744 (0%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  N++++ Y K GN  ++R LFD++ +R+ V+W  L   Y   +   EA   F EM   
Sbjct: 133 FSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRH 192

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           GI P+  SL+++++           R++H + IKLGYDS +  +N+L+D Y K  +L  A
Sbjct: 193 GIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLA 252

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +F DI   D V++NA++ G      N  A+ LF +M+     P  FT+ + L A   +
Sbjct: 253 FQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQL 312

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
           +  E G+Q+H  ++K     +  V   L+D Y+K   + EA  +F+ MPE + I++N+++
Sbjct: 313 DDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLV 372

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVKTA 328
           + +  NG   E+  LF  +  +  GFD+     +T+L   A    + + +Q+H+ ++ T 
Sbjct: 373 TCYAWNGRVKESLELFKEL--QFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD 430

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+  + NSL+D Y KCG   +A +IF + +    V  T+MI++Y Q GL E+ LKL++
Sbjct: 431 AISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFV 490

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           EMQ  +I  D+   +S++ ACA+L++   GKQ+H HII  G++S+ F+G++LV+MYAKCG
Sbjct: 491 EMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCG 550

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           SI DA + F E+P R  VSW+A+I   AQ+G G   L++F +M+  G+ P+ ++L+S+LC
Sbjct: 551 SIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILC 610

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H GLV E   +F+SM + + + P +EHYA  ID+L R G+F EA +L+  MPF+ + 
Sbjct: 611 ACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDE 670

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVRRF 627
            +W ++L +  I+KN E+ + AA  LF ++  + ++ +V +SNIYA+AG WDNV KV++ 
Sbjct: 671 IMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKA 730

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           M++  +KK P  SW+E+K K + FT  D++H + +EI  KLDE+ + + K GY P     
Sbjct: 731 MRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCA 790

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           LH+V+E  K + L +HSE++A+AF LI+TP G+ I V KNLR C DCH + + ISKIV R
Sbjct: 791 LHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRR 850

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EI VRD +RFHHFR+G C+C  YW
Sbjct: 851 EITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 277/512 (54%), Gaps = 9/512 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           QVH  V+  G+DS   V+NSL+  Y K  +   + +LF+ IPER  V++N+L + Y    
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           F  EA+  F +M   G RP EF+ ++++ A     D   G+++HG+ +K  +  ++F AN
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVAN 338

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           AL+D Y+K   + +A  +F ++   D +S+N ++     +     +L+LF++++ +  + 
Sbjct: 339 ALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDR 398

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
             F + + L   A     ++GRQ+H   I  +  S+ +VG  LVDMYAKCG   EA  IF
Sbjct: 399 RNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIF 458

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             +  ++ + W  +IS ++Q G   +   LF  M R  +G D  T ++++++ AS  ++ 
Sbjct: 459 SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLT 518

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQ+H+  + + + S+ +  ++L+D Y KCG ++DA+++F+E    + V+  ++I+AYA
Sbjct: 519 LGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYA 578

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH---VHIIKFGFMS 432
           Q G G+  L+L+ EM    + PDS    S+L AC++    E+G Q       I K     
Sbjct: 579 QNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKK 638

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           + +A  S ++M  + G  D+A++  +++P +   + WS+++     H   + A +   Q+
Sbjct: 639 EHYA--STIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQL 696

Query: 492 LEDGVLPN---HITLVSVLCACNHAGLVAEAK 520
               VL +   ++T+ ++  A      V + K
Sbjct: 697 FNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVK 728



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 226/470 (48%), Gaps = 43/470 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A     D+  G QVHG VV   F  + FVAN+L+  Y+K    +++ +LF  +PE  
Sbjct: 305 ILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVD 364

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+N L +CY     ++E++  FKE+  +G     F  +++++  A S +  +GR+IH 
Sbjct: 365 GISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHS 424

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I     S++   N+LVDMYAK G   +A  +F D+     V W A+I+  V    ++ 
Sbjct: 425 QTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHED 484

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKLF +M+ ++I  +  TY S ++ACA +    LG+QLH  +I     S+   G  LVD
Sbjct: 485 GLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVD 544

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A  +F  MP +N ++WN +IS + QNG       LF  M R G+  D  +
Sbjct: 545 MYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVS 604

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L ++L           C   H                        CG VE+ ++ F   +
Sbjct: 605 LLSIL-----------CACSH------------------------CGLVEEGLQYFDSMT 629

Query: 361 AV-DLVA----CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            +  LV       S I    + G  +EA KL  +M      PD  + SS+LN+C      
Sbjct: 630 RIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQM---PFEPDEIMWSSVLNSCGIHKNQ 686

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           E  K+    +     + D     ++ N+YA  G  D+  +    + +RG+
Sbjct: 687 ELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGV 736



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 243/495 (49%), Gaps = 14/495 (2%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD----SDMFSANALVDMYA 142
           ++ +G  PN +  + ++ +    GD    RK+        +D     ++FS N ++  Y 
Sbjct: 92  IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKL--------FDEMPHKNIFSTNTMIMGYI 143

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K GNL +A  +F  +     V+W  +I G   +     A  LF +M    I+P+  +  +
Sbjct: 144 KSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLAT 203

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            L      +     RQ+H  +IK+   S  +V   L+D Y K  S+  A  +F+ +PE++
Sbjct: 204 LLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERD 263

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            + +N +++G+ + G + EA +LF  M   G    + T + +L +      I   +QVH 
Sbjct: 264 SVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHG 323

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             VK  F  + ++ N+L+D Y K   V +A K+F E   VD ++   ++T YA  G  +E
Sbjct: 324 FVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKE 383

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           +L+L+ E+Q    +  +F  ++LL+  A     + G+Q+H   I    +S+   GNSLV+
Sbjct: 384 SLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVD 443

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MYAKCG   +A+R FS++  +  V W+AMI    Q G  ++ L++F +M    +  +  T
Sbjct: 444 MYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAAT 503

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
             S++ AC     +   K     +     I  +    A ++D+  + G  ++A+++   M
Sbjct: 504 YASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA-LVDMYAKCGSIKDALQMFQEM 562

Query: 563 PFQANASVWGALLGA 577
           P + N+  W AL+ A
Sbjct: 563 PVR-NSVSWNALISA 576



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 194/413 (46%), Gaps = 40/413 (9%)

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL------------------ 263
           S+IK     +      LV  + + G ++ AR +F  MP KN+                  
Sbjct: 91  SIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSE 150

Query: 264 -------------IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
                        + W ++I G+ QN    EA  LF  M R G+  D  +L+T+L     
Sbjct: 151 ARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTE 210

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
           F ++   +QVH+  +K  ++S   + NSL+D+Y K   +  A ++F +    D V   ++
Sbjct: 211 FDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNAL 270

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           +T Y++ G   EA+ L+ +MQ+    P  F  +++L A   L   E G+QVH  ++K  F
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNF 330

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           + + F  N+L++ Y+K   + +A + F E+P+   +S++ ++   A +GR KE+L++F +
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKE 390

Query: 491 MLEDGVLPNHITLVSVLC-ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +   G    +    ++L  A     L    + H +++      + +  +   ++D+  + 
Sbjct: 391 LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGN--SLVDMYAKC 448

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           G+F EA  +   +  Q++   W A++ +      V+ G H   +   +E +++
Sbjct: 449 GEFGEANRIFSDLAIQSSVP-WTAMISSY-----VQKGLHEDGLKLFVEMQRA 495



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 152/384 (39%), Gaps = 82/384 (21%)

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-------------------- 358
            V A  +KT F  + Y  N L+ ++ + G +  A K+F E                    
Sbjct: 87  HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146

Query: 359 --SSAVDL---------VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
             S A  L         V  T +I  YAQ     EA  L++EM    I+PD    ++LL+
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
                 +  + +QVH H+IK G+ S     NSL++ Y K  S+  A + F++IP+R  V+
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT 266

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA------------------ 509
           ++A++ G ++ G  +EA+ +F +M E G  P   T  ++L A                  
Sbjct: 267 FNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326

Query: 510 -CNHA----------------GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            CN                    V EA   F  M +  GI      Y  ++      G+ 
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGIS-----YNVLVTCYAWNGRV 381

Query: 553 QEAMELVDTMPFQA---NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           +E++EL   + F         +  LL  A I  N+++G+         +         +S
Sbjct: 382 KESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA--------IS 433

Query: 610 NIYASAGMWDNVAKVRRFMKDNKL 633
            I     + D  AK   F + N++
Sbjct: 434 EILVGNSLVDMYAKCGEFGEANRI 457



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 57/315 (18%)

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           L+ K  F+++  ++  L+D +    +  D++K++        V C  + T    FG   +
Sbjct: 5   LAKKNLFQNECRMIPLLLDGWSNYLNKNDSIKVWT------CVICL-IFTNAGHFG--SK 55

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
             +L L + +  I P    C+   N    L+A +    V   IIK GF  +T+  N LV 
Sbjct: 56  QYELTLSLMNNIIKP----CTR--NLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVK 109

Query: 443 MYAKCGSIDDADRAFSEIPDRGI-------------------------------VSWSAM 471
            + + G ++ A + F E+P + I                               V+W+ +
Sbjct: 110 SFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTML 169

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           IGG AQ+ + +EA  +F +M   G+ P+H++L ++L        V E +    S   K G
Sbjct: 170 IGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVR-QVHSHVIKLG 228

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR----------IY 581
                     ++D   +      A +L + +P + + +    L G ++           +
Sbjct: 229 YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFF 288

Query: 582 KNVEVGQHAAEMLFA 596
           K  EVG    E  FA
Sbjct: 289 KMQEVGYRPTEFTFA 303


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 309/768 (40%), Positives = 461/768 (60%), Gaps = 14/768 (1%)

Query: 13  LGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-RSVVSWNSLFSC 70
           LG  +H  ++ T   D+D  VANSL+ MY+KCG+   +RR+FD +   R +VSW ++  C
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC-AGSGDSLLGRKIHGYSIKLGY-D 128
                  +EA+    EM+ SG+RPN F+L +  +AC  G      G  + G++IK G+  
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           +D+    AL+DM+A+ G+L  A  VF  +    +V W  +I   V       A++LF  M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG-- 246
                 P+ +T +S + ACA      LG+QLH  ++++ + SD  V  GLVDMY K    
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300

Query: 247 -SMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTV 304
            SM+ AR +F  MP  N+++W  +ISG++Q GG +  A  L   M  E +  +  T S++
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSL 360

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           LK+ A+       +Q+HA  +KT+  + + + N+L+  Y + G +E+A K F +    +L
Sbjct: 361 LKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNL 420

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           ++ +S I    + G    +    +E  D  +   +F  +SLL+A A +    +G+Q+H  
Sbjct: 421 LSTSSDI---GETGRSNASWSSQIESMD--VGVSTFTFASLLSAAATVGLPTKGQQLHAL 475

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKE 483
            IK GF SD    NSLV+MY++CG +DDA RAF E+ D   ++SW+++I  LA+HG  + 
Sbjct: 476 SIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAER 535

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL +F  M+  GV PN +T ++VL AC+H GLV E K +F SM+K   + P  EHYACM+
Sbjct: 536 ALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMV 595

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+L R+G  QEA+E ++ MP +A+A VW  LLGA R Y+N+E+G+ AA  +  +EP+  +
Sbjct: 596 DLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPA 655

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +VLLSN+YA  G+WD VA++R  M+   L KE G+SW+ V + ++ F  GD SH R++E
Sbjct: 656 PYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQE 715

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           IYAKL  +   +   GYVP     LHD+ +  KEQ L  HSEK+AVAFGLI T P   IR
Sbjct: 716 IYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIR 775

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + KNLR+C DCH++ ++ISK   REII+RD NRFH  ++G CSCG YW
Sbjct: 776 IFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/772 (37%), Positives = 461/772 (59%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C+S K++  G +VH  V   GF+ +  V   L+ MYA+CG+  +++++F+ +  + 
Sbjct: 10  LLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 69

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +W  +   Y      + A+  F +M    + P + +  +++NACA +     G +IHG
Sbjct: 70  VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 129

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G++ D+F   AL++MY K G++  A   FK +EH D+VSW A+IA CV H+    
Sbjct: 130 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 189

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  L+++M+   + PN  T  +   A         G+ ++  +    ++SD  V    V+
Sbjct: 190 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVN 249

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M+   G + +AR +F  M +++++ WNIVI+ ++QN    EA  LF  + ++GV  +  T
Sbjct: 250 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDIT 309

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L    S  ++   K +H L  +  ++ D  +  +L+  YG+C     A KIF +  
Sbjct: 310 FVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMG 369

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D++  T M  AYAQ G  +EAL+L+ EMQ     P S    ++L+ CA+L+A ++G+Q
Sbjct: 370 SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQ 429

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H HII+  F  +     +L+NMY KCG + +A   F ++  R I+ W++M+G  AQHG 
Sbjct: 430 IHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGY 489

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             E LQ+F QM  DGV  + ++ VSVL A +H+G V +   +F +M + F I P  E Y 
Sbjct: 490 YDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYG 549

Query: 541 CMIDILGRAGKFQEAMELVDTMP-FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           C++D+LGRAG+ QEA+++V  +     +  +W  LLGA R +   +  + AAE +   +P
Sbjct: 550 CVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDP 609

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             S  +V+LSN+YA+AG WD V ++R+ M+   +KKEPG S IE+ ++V+ F  GDRSH 
Sbjct: 610 SHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHP 669

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           R   IYA+LD ++  +  AGY+P  +  LHDVE+  KE +L++HSE+LA+AFGLI+TPPG
Sbjct: 670 RRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPG 729

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +RV KNLR+C DCHT+ ++ISK+  REI+VRD +RFH+F++G CSC  YW
Sbjct: 730 TPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 255/490 (52%), Gaps = 12/490 (2%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           +P+     +++  C+ + +   GR++H +    G++ +      L+ MYA+ G++ +A  
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF+ +E  D+ +W  +I         D AL +F QM+  ++ P   TY + L ACA  E 
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            + G ++H  +++   + D  VG  L++MY KCGS+  A   F  +  +++++W  +I+ 
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 273 HLQNGGDMEAASLFPWMYR----EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
            +Q+    +  +L  W+YR    +GV  ++ TL TV  +      +   K V+ L     
Sbjct: 181 CVQH----DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV 236

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            ESD  ++NS ++ +G  G + DA ++F++    D+V    +IT Y Q     EA++L+ 
Sbjct: 237 MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFG 296

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            +Q   +  +      +LN   +L++  +GK +H  + + G+  D     +L+++Y +C 
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCE 356

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           +   A + F ++  + +++W+ M    AQ+G  KEALQ+F +M  +G  P   TLV+VL 
Sbjct: 357 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 416

Query: 509 ACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            C H   + + +  H   +E +F ++ + E    +I++ G+ GK  EAM + + M  + +
Sbjct: 417 TCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRD 473

Query: 568 ASVWGALLGA 577
             VW ++LGA
Sbjct: 474 ILVWNSMLGA 483


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/772 (36%), Positives = 461/772 (59%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C+S K++  G +VH  V   GF+ +  V   L+ MYA+CG+  +++++F+ +  + 
Sbjct: 11  LLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 70

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +W  +   Y      + A+  F +M    + P + +  +++NACA +     G +IHG
Sbjct: 71  VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 130

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G++ D+F   AL++MY K G++  A   FK +EH D+VSW A+IA CV H+    
Sbjct: 131 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 190

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  L+++M+   + PN  T  +   A         G+ ++  +    ++SD  V    ++
Sbjct: 191 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMN 250

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M+   G + +AR +F  M +++++ WNIVI+ ++QN    EA  LF  + ++G+  +  T
Sbjct: 251 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDIT 310

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L    S  ++   K +H L  +  ++ D  +  +L+  YG+C     A KIF +  
Sbjct: 311 FVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMG 370

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D++  T M  AYAQ G  +EAL+L+ EMQ     P S    ++L+ CA+L+A ++G+Q
Sbjct: 371 SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQ 430

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H HII+ GF  +     +L+NMY KCG + +A   F ++  R I+ W++M+G  AQHG 
Sbjct: 431 IHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGY 490

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             E LQ+F QM  DG   + ++ VSVL A +H+G V +   +F +M + F I P  E Y 
Sbjct: 491 YDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYG 550

Query: 541 CMIDILGRAGKFQEAMELVDTMP-FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           C++D+LGRAG+ QEA+++V  +     +  +W  LLGA R +   +  + AAE +   +P
Sbjct: 551 CVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDP 610

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             S  +V+LSN+YA+AG WD V ++R+ M+   +KKEPG S IE+ ++V+ F  GDRSH 
Sbjct: 611 SHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHP 670

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           R   IYA+LD ++  +  AGY+P  +  LHDVE+  KE +L++HSE+LA+AFGL++TPPG
Sbjct: 671 RRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPG 730

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +RV KNLR+C DCHT+ ++ISK+  REI+VRD +RFH+F++G CSC  YW
Sbjct: 731 TPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 254/490 (51%), Gaps = 12/490 (2%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           +P+     +++  C+ + +   GR++H +    G++ +      L+ MYA+ G++ +A  
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF+ +E  D+ +W  +I         D AL +F QM+  ++ P   TY + L ACA  E 
Sbjct: 62  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            + G ++H  +++   + D  VG  L++MY KCGS+  A   F  +  +++++W  +I+ 
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181

Query: 273 HLQNGGDMEAASLFPWMYR----EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
            +Q+    +  +L  W+YR    +GV  ++ TL TV  +      +   K +++L     
Sbjct: 182 CVQH----DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV 237

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            ESD  ++NS ++ +G  G + DA ++F++    D+V    +IT Y Q     EA++L+ 
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            +Q   I  +      +LN   +L++  +GK +H  + + G+  D     +L+++Y +C 
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCE 357

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           +   A + F ++  + +++W+ M    AQ+G  KEALQ+F +M  +G  P   TLV+VL 
Sbjct: 358 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 417

Query: 509 ACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            C H   + + +  H   +E  F ++ + E    +I++ G+ GK  EA  + + M  + +
Sbjct: 418 TCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRD 474

Query: 568 ASVWGALLGA 577
             VW ++LGA
Sbjct: 475 ILVWNSMLGA 484


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/771 (38%), Positives = 468/771 (60%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL A T  +   LG Q+H +V+  GF S+ +V N LV +Y++    I + R+F  +  R 
Sbjct: 267  VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             VS+NSL S  V   F + A+  F +M    ++P+  +++S+++ACA  G    G ++H 
Sbjct: 327  GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++IK G  +D+    +L+D+Y+K  ++E A   F   E  +IV WN ++      ++   
Sbjct: 387  HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSD 446

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + ++F+QM+   + PN FTY S L+ C  +    LG Q+H  +IK   + +  V   L+D
Sbjct: 447  SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID 506

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAK G +  A  I   +PE ++++W  +I+G++Q+    EA  LF  M   G+ FD   
Sbjct: 507  MYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIG 566

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++ + + A  +A+   +Q+HA S    F +D  I N+LI  Y +CG +++A   F++  
Sbjct: 567  FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              + ++  S+++  AQ G  EEAL++++ M   E   + F   S ++A A+L+  +QG+Q
Sbjct: 627  DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            +H  ++K G+ S+    NSL+++YAK GSI DA R F+++ +R ++SW+AMI G +QHG 
Sbjct: 687  IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G EAL++F +M   G++PNH+T V VL AC+H GLV E   +FESM K   + P  EHY 
Sbjct: 747  GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+LGRAG+   AME +  MP  A+A +W  LL A  I+KN+E+G+ AA  L  +EPE
Sbjct: 807  CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE 866

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             S+T+VL+SNIYA +  W +    R+ MKD  +KKEPG SWIEVK+ V+ F  GD+ H  
Sbjct: 867  DSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPL 926

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + +IY  +  ++   ++ GYV    + L++ E+ +K+ + + HSEKLA+AFGL++     
Sbjct: 927  TNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNI 986

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IRV KNLR+C DCH   +++SKI +R IIVRD +RFHHF  G CSC  +W
Sbjct: 987  PIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 305/578 (52%), Gaps = 7/578 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C +   LF  +++H  +  +GFD +  + +SLV  Y + G+   + ++FD    RS
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG--RKI 118
           V SWN +   +V      +  C F+ M+  GI PN ++ + ++ AC G GD      +++
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQV 182

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  +   G+DS    AN L+D+Y+K G +E A  VF  I   DIV+W A+I+G   +   
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A+ LF  M +SEI P  +  +S L A   ++L ELG QLHC +IK    S+  V  GL
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V +Y++   +  A  IF  M  ++ +++N +ISG +Q G    A  LF  M R+ +  D 
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T++++L + AS  A+    Q+H+ ++K    +D  +  SL+D Y KC  VE A K F  
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 422

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           +   ++V    M+ AY Q     ++ +++ +MQ   + P+ F   S+L  C +L A   G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +Q+H H+IK GF  + +  + L++MYAK G +  A R    +P+  +VSW+AMI G  QH
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQE 537
               EALQ+F +M   G+  ++I   S + AC     + + +  H +S    FG      
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN 602

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           +   +I +  R G+ QEA    + +  + N S W +L+
Sbjct: 603 N--ALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLV 637



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 248/491 (50%), Gaps = 9/491 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+R N  +   ++  C  SG      ++H    K G+D +    ++LVD Y + G+   A
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           V VF +  +  + SWN +I   V  + N     LF++M +  I PN +T+   LKAC G 
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGG 172

Query: 211 ELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           ++     +Q+H         S P+V   L+D+Y+K G ++ A+ +F+ +  K+++ W  +
Sbjct: 173 DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAM 232

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG  QNG + EA  LF  M+   +      LS+VL +    Q   + +Q+H L +K  F
Sbjct: 233 ISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF 292

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            S+ Y+ N L+  Y +   +  A +IF   ++ D V+  S+I+   Q G  + AL+L+ +
Sbjct: 293 HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK 352

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           MQ   + PD    +SLL+ACA++ A  +G Q+H H IK G  +D     SL+++Y+KC  
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++ A + F       IV W+ M+    Q     ++ ++F QM  +G++PN  T  S+L  
Sbjct: 413 VETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472

Query: 510 CNHAG-LVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQA 566
           C   G L    + H   ++  F +      Y C  +ID+  + G+   A+ ++  +P + 
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNV----YVCSVLIDMYAKYGQLALALRILRRLP-ED 527

Query: 567 NASVWGALLGA 577
           +   W A++  
Sbjct: 528 DVVSWTAMIAG 538



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 6/288 (2%)

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           G  +   L  +M   GV  +      +L+   +  ++    ++H    K+ F+ +  +++
Sbjct: 38  GKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLID 97

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SL+D Y + G    AVK+F E+S   + +   MI  +       +   L+  M    I P
Sbjct: 98  SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157

Query: 398 DSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           + +  + +L AC     A+   KQVH     +GF S     N L+++Y+K G I+ A + 
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F+ I  + IV+W AMI GL+Q+G  +EA+ +F  M    + P    L SVL A     L 
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277

Query: 517 AEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTM 562
            E       +  K+G     E Y C  ++ +  R+ K   A  +  TM
Sbjct: 278 -ELGEQLHCLVIKWGFHS--ETYVCNGLVALYSRSRKLISAERIFSTM 322


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 450/771 (58%), Gaps = 29/771 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+ C  K +   G  +H  ++  G   D F  N L+ MY K     D+ +LFD +PER+ 
Sbjct: 45  LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +S+ +L   Y       EA+  F  +   G   N F  ++++          LG  IH  
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHAC 164

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             KLG++S+ F   AL+D Y+  G ++ A  VF  I + D+VSW  ++     ++    A
Sbjct: 165 IFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEA 224

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           LKLF QM+     PN FT+ S  KAC G+E  ++G+ +H   +K   + D  VGV L+D+
Sbjct: 225 LKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDL 284

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K G +D+AR  F  +P+K++I W+ +I+ + Q+    EA  +F  M +  V  +Q T 
Sbjct: 285 YTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTF 344

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS- 360
           ++VL++ A+ + + +  Q+H   +K    SD ++ N+L+D Y KCG +E+++ +F ES  
Sbjct: 345 ASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPH 404

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+    ++I  + Q G GE+AL+L+L M +  +       SS L ACA+L+A E G Q
Sbjct: 405 RNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ 464

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   +K  F  D    N+L++MYAKCGSI DA   F  +  +  VSW+AMI G + HG 
Sbjct: 465 IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG- 523

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
                                       AC +AGL+ + + +F SM +  GI+P  EHY 
Sbjct: 524 ---------------------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYT 556

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+ +LGR G   +A++L+D +PFQ +  VW ALLGA  I+ ++E+G+ +A+ +  +EP+
Sbjct: 557 CMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQ 616

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             +THVLLSN+YA+A  WDNVA VR+ MK   +KKEPG+SWIE +  V++FTVGD SH  
Sbjct: 617 DKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPE 676

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + I   L+ +     KAGY+P     L DVE+ EKE+LL+ HSE+LA++FG+I TP G+
Sbjct: 677 VRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGS 736

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IR+ KNLRICVDCH + + ISK+V REI+VRD+NRFHHF+ G CSCG YW
Sbjct: 737 PIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 257/491 (52%), Gaps = 12/491 (2%)

Query: 92  IRPNEFSLSSMINA---CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           + P+EF+  +  NA   C    +   G+ +H   +K G   D+F+ N L++MY K   L 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKA 206
           DA  +F ++   + +S+  +I G         A++LF ++  +  E+NP  F +T+ LK 
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNP--FVFTTILKL 148

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
              M+  ELG  +H  + K+  +S+  VG  L+D Y+ CG +D AR +F  +  K++++W
Sbjct: 149 LVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSW 208

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +++   +N    EA  LF  M   G   +  T ++V K+    +A  V K VH  ++K
Sbjct: 209 TGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALK 268

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           + +E D Y+  +L+D Y K G ++DA   F+E    D++  + MI  YAQ    +EA+++
Sbjct: 269 SRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEM 328

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + +M+   + P+ F  +S+L ACA +     G Q+H H+IK G  SD F  N+L+++YAK
Sbjct: 329 FFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK 388

Query: 447 CGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           CG ++++   F+E P R  +  W+ +I G  Q G G++AL++F  MLE  V    +T  S
Sbjct: 389 CGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSS 448

Query: 506 VLCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            L AC  A L A E      S+  K            +ID+  + G  ++A  + D M  
Sbjct: 449 ALRAC--ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNK 506

Query: 565 QANASVWGALL 575
           Q   S W A++
Sbjct: 507 QDEVS-WNAMI 516



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 4/143 (2%)

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA---CANLSAYEQGKQVHVH 424
            + +  +++ G   ++ KL  E     ++P  F   +  NA   C       +GK +H  
Sbjct: 5   NNFLIRFSRRGFSVQSAKLTQEFVG-HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           I+K G   D FA N L+NMY K   + DA + F E+P+R  +S+  +I G A+  R  EA
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123

Query: 485 LQMFGQMLEDGVLPNHITLVSVL 507
           +++F ++  +G   N     ++L
Sbjct: 124 IELFVRLHREGHELNPFVFTTIL 146


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/771 (38%), Positives = 468/771 (60%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL A T  +   LG Q+H +V+  GF S+ +V N LV +Y++    I + R+F  +  R 
Sbjct: 267  VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             VS+NSL S  V   F + A+  F +M    ++P+  +++S+++ACA  G    G ++H 
Sbjct: 327  GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++IK G  +D+    +L+D+Y+K  ++E A   F   E  +IV WN ++      ++   
Sbjct: 387  HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSD 446

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + ++F+QM+   + PN FTY S L+ C  +    LG Q+H  +IK   + +  V   L+D
Sbjct: 447  SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID 506

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAK G +  A  I   +PE ++++W  +I+G++Q+    EA  LF  M   G+ FD   
Sbjct: 507  MYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIG 566

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++ + + A  +A+   +Q+HA S    F +D  I N+LI  Y +CG +++A   F++  
Sbjct: 567  FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              + ++  S+++  AQ G  EEAL++++ M   E   + F   S ++A A+L+  +QG+Q
Sbjct: 627  DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            +H  ++K G+ S+    NSL+++YAK GSI DA R F+++ +R ++SW+AMI G +QHG 
Sbjct: 687  IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G EAL++F +M   G++PNH+T V VL AC+H GLV E   +FESM K   + P  EHY 
Sbjct: 747  GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+LGRAG+   AME +  MP  A+A +W  LL A  I+KN+E+G+ AA  L  +EPE
Sbjct: 807  CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE 866

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             S+T+VL+SNIYA +  W +    R+ MKD  +KKEPG SWIEVK+ V+ F  GD+ H  
Sbjct: 867  DSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPL 926

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            + +IY  +  ++   ++ GYV    + L++ E+ +K+ + + HSEKLA+AFGL++     
Sbjct: 927  TNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNI 986

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IRV KNLR+C DCH   +++SKI +R IIVRD +RFHHF  G CSC  +W
Sbjct: 987  PIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 305/578 (52%), Gaps = 7/578 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C +   LF  +++H  +  +GFD +  + +SLV  Y + G+   + ++FD    RS
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG--RKI 118
           V SWN +   +V      +  C F+ M+  GI PN ++ + ++ AC G GD      +++
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQV 182

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  +   G+DS    AN L+D+Y+K G +E A  VF  I   DIV+W A+I+G   +   
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A+ LF  M +SEI P  +  +S L A   ++L ELG QLHC +IK    S+  V  GL
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V +Y++   +  A  IF  M  ++ +++N +ISG +Q G    A  LF  M R+ +  D 
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T++++L + AS  A+    Q+H+ ++K    +D  +  SL+D Y KC  VE A K F  
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLX 422

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           +   ++V    M+ AY Q     ++ +++ +MQ   + P+ F   S+L  C +L A   G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +Q+H H+IK GF  + +  + L++MYAK G +  A R    +P+  +VSW+AMI G  QH
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQE 537
               EALQ+F +M   G+  ++I   S + AC     + + +  H +S    FG      
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN 602

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           +   +I +  R G+ QEA    + +  + N S W +L+
Sbjct: 603 N--ALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLV 637



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 248/491 (50%), Gaps = 9/491 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+R N  +   ++  C  SG      ++H    K G+D +    ++LVD Y + G+   A
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           V VF +  +  + SWN +I   V  + N     LF++M +  I PN +T+   LKAC G 
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGG 172

Query: 211 ELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           ++     +Q+H         S P+V   L+D+Y+K G ++ A+ +F+ +  K+++ W  +
Sbjct: 173 DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAM 232

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG  QNG + EA  LF  M+   +      LS+VL +    Q   + +Q+H L +K  F
Sbjct: 233 ISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF 292

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            S+ Y+ N L+  Y +   +  A +IF   ++ D V+  S+I+   Q G  + AL+L+ +
Sbjct: 293 HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK 352

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           MQ   + PD    +SLL+ACA++ A  +G Q+H H IK G  +D     SL+++Y+KC  
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++ A + F       IV W+ M+    Q     ++ ++F QM  +G++PN  T  S+L  
Sbjct: 413 VETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472

Query: 510 CNHAG-LVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQA 566
           C   G L    + H   ++  F +      Y C  +ID+  + G+   A+ ++  +P + 
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNV----YVCSVLIDMYAKYGQLALALRILRRLP-ED 527

Query: 567 NASVWGALLGA 577
           +   W A++  
Sbjct: 528 DVVSWTAMIAG 538



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 6/288 (2%)

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           G  +   L  +M   GV  +      +L+   +  ++    ++H    K+ F+ +  +++
Sbjct: 38  GKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLID 97

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SL+D Y + G    AVK+F E+S   + +   MI  +       +   L+  M    I P
Sbjct: 98  SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157

Query: 398 DSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           + +  + +L AC     A+   KQVH     +GF S     N L+++Y+K G I+ A + 
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F+ I  + IV+W AMI GL+Q+G  +EA+ +F  M    + P    L SVL A     L 
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277

Query: 517 AEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTM 562
            E       +  K+G     E Y C  ++ +  R+ K   A  +  TM
Sbjct: 278 -ELGEQLHCLVIKWGFHS--ETYVCNGLVALYSRSRKLISAERIFSTM 322


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/772 (38%), Positives = 450/772 (58%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC   K L    ++H   +    ++D  V + L  +Y  C   + +RRLFD IP  S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+ WN +   Y      + A+  +  M+  G+RPN+++   ++ AC+G      G +IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++   G +SD+F   ALVD YAK G L +A  +F  + H D+V+WNA+IAGC L+   D 
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  QM+   I PN  T    L      +    G+ LH   ++    +  +VG GL+D
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQT 299
           MYAKC  +  AR IF +M  +N ++W+ +I G++ +    EA  LF  M  ++ +     
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL +VL++ A    +   +++H   +K     D  + N+L+  Y KCG ++DA++ F E 
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D V+ +++++   Q G    AL ++  MQ   I+PD      +L AC++L+A + G 
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
             H ++I  GF +DT   N+L++MY+KCG I  A   F+ +    IVSW+AMI G   HG
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G EAL +F  +L  G+ P+ IT + +L +C+H+GLV E +  F++M + F I P  EH 
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+DILGRAG   EA   +  MPF+ +  +W ALL A RI+KN+E+G+  ++ + ++ P
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E +   VLLSNIY++AG WD+ A +R   KD  LKK PG SWIE+   V+ F  GD+SH 
Sbjct: 614 ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHL 673

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           +  +I  KL+E+   + + GY         DVEE EKEQ+L +HSEKLA+AFG++    G
Sbjct: 674 QLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAG 733

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I V KNLR+C DCHT+ +F++ I  REI VRD NRFHHF+NG+C+CG +W
Sbjct: 734 RPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 161/313 (51%), Gaps = 1/313 (0%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
            Y   L+AC   +     +++H   +K    +D  V   L  +Y  C  +  AR +F  +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P  ++I WN +I  +  NG    A  L+  M   GV  ++ T   VLK+ +   AI    
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H+ +     ESD ++  +L+D Y KCG + +A ++F   S  D+VA  +MI   + +G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           L ++A++L ++MQ+  I P+S     +L       A   GK +H + ++  F +    G 
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVL 497
            L++MYAKC  +  A + F  +  R  VSWSAMIGG       KEAL++F QM L+D + 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309

Query: 498 PNHITLVSVLCAC 510
           P  +TL SVL AC
Sbjct: 310 PTPVTLGSVLRAC 322


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 302/774 (39%), Positives = 463/774 (59%), Gaps = 26/774 (3%)

Query: 10  DLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-RSVVSWNSL 67
           DL LG  +H  ++     D D  VANSL+ +Y++CG    +R +FD +   R +VSW ++
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG-----SGDSLLGRKIHGYS 122
            SC         ++    EM+ SG+ PN ++L +  +AC           ++   +H   
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVH--- 179

Query: 123 IKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            K+G + +D+   +AL+DM A+ G+L  A  VF  +    +V W  +I+  V  E  + A
Sbjct: 180 -KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           ++LF         P+ +T +S + AC  +    LG QLH   ++M + SD  V  GLVDM
Sbjct: 239 VELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDM 298

Query: 242 YAKCG---SMDEARMIFHLMPEKNLIAWNIVISGHLQNG-GDMEAASLFPWMYREGVGFD 297
           YAK     +MD A  +F  MP+ ++I+W  +ISG++Q+G  + +  +LF  M  E +  +
Sbjct: 299 YAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPN 358

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S++LKS AS       +QVHA  +K+   S   + N+L+  Y + G +E+A ++F 
Sbjct: 359 HITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFN 418

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +     ++ C   IT    F L    +++     D  I+  +F  +SL++A A++    +
Sbjct: 419 QLYERSMIPC---ITEGRDFPLDHRIVRM-----DVGISSSTF--ASLISAAASVGMLTK 468

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q+H   +K GF SD F  NSLV+MY++CG ++DA R+F+E+ DR ++SW++MI GLA+
Sbjct: 469 GQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAK 528

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG  + AL +F  M+  GV PN +T ++VL AC+H GLV E K +F SM++  G+ P  E
Sbjct: 529 HGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRME 588

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HYACM+D+L R+G  +EA+E ++ MP +A+A VW  LLGA R + N+EVG+  A+ +  +
Sbjct: 589 HYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVEL 648

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP   + +VLLSN+YA AG+WD VA++R  M+DN L KE G+SW+EV++  + F  GD S
Sbjct: 649 EPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTS 708

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H R+++IY KLD +   +   GYVP     LHD+ +  KEQ L  HSEK+AVAFGLI T 
Sbjct: 709 HPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTS 768

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
               IR+ KNLR+C DCH++ +++SK   REII+RD NRFH  ++G CSCG YW
Sbjct: 769 APKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 237/493 (48%), Gaps = 52/493 (10%)

Query: 110 GDSLLGRKIHGYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNA 167
           GD  LGR +H   ++    D D   AN+L+ +Y++ G +  A  VF  +    DIVSW A
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI--- 224
           + +    +     +L L  +M  S + PN +T  +A  AC          +L+C +    
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC-------FPHELYCLVGGVV 174

Query: 225 -----KMEI-KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
                KM +  +D  VG  L+DM A+ G +  AR +F  + EK ++ W ++IS ++Q   
Sbjct: 175 LGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGEC 234

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             EA  LF     +G   D+ T+S+++ +     ++ +  Q+H+L+++    SD  +   
Sbjct: 235 AEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCG 294

Query: 339 LIDAYGKC--GHVED-AVKIFKESSAVDLVACTSMITAYAQFGLGE-EALKLYLEMQDRE 394
           L+D Y K   G   D A K+F+     D+++ T++I+ Y Q G+ E + + L+ EM +  
Sbjct: 295 LVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNES 354

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           I P+    SS+L +CA++S ++ G+QVH H+IK    S    GN+LV+MYA+ G +++A 
Sbjct: 355 IKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEAR 414

Query: 455 RAFSEIPDRGIV-------------------------SWSAMIGGLAQHGRGKEALQMFG 489
           R F+++ +R ++                         +++++I   A  G   +  Q+  
Sbjct: 415 RVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHA 474

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
             L+ G   +     S++   +  G + +A   F  ++ +  I      +  MI  L + 
Sbjct: 475 MSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-----WTSMISGLAKH 529

Query: 550 GKFQEAMELVDTM 562
           G  + A+ L   M
Sbjct: 530 GYAERALSLFHDM 542


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 290/740 (39%), Positives = 452/740 (61%), Gaps = 1/740 (0%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N ++  Y K GN  ++R+LFD + ER+ V+W  L   Y   +  +EA   F +M   G 
Sbjct: 86  TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 145

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            P+  +  ++++ C G        ++    IKLGYDS +   N LVD Y K   L+ A  
Sbjct: 146 EPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQ 205

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +FK++   D VS+NA+I G      ++ A+ LF +M++S + P  FT+ + L A  G++ 
Sbjct: 206 LFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDD 265

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             LG+Q+H  +IK     +  V   L+D Y+K  S+ +AR +F  MPE++ +++N++ISG
Sbjct: 266 IVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISG 325

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           +  +G    A  LF  +        Q   +T+L   ++     + +Q+HA ++ T  +S+
Sbjct: 326 YAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE 385

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             + NSL+D Y KCG  E+A  IF   +    V  T+MI+AY Q G  EE L+L+ +M+ 
Sbjct: 386 ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 445

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +  D    +SLL A A++++   GKQ+H  IIK GFMS+ F+G++L+++YAKCGSI D
Sbjct: 446 ASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKD 505

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A + F E+PDR IVSW+AMI   AQ+G  +  L+ F +M+  G+ P+ ++ + VL AC+H
Sbjct: 506 AVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSH 565

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           +GLV E   HF SM + + + P +EHYA ++D+L R+G+F EA +L+  MP   +  +W 
Sbjct: 566 SGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS 625

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++L A RI+KN E+ + AA+ LF +E  + ++ +V +SNIYA+AG W+NV+KV + M+D 
Sbjct: 626 SVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDR 685

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            +KK P  SW+E+K + + F+  DR H + +EI  K+D ++  + + GY P     LH+ 
Sbjct: 686 GVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNE 745

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E  K + L +HSE+LA+AF LI+TP G+ I V KNLR C+DCH + + ISKIV REI V
Sbjct: 746 DEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITV 805

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD  RFHHFR+G CSCG +W
Sbjct: 806 RDSTRFHHFRDGFCSCGDFW 825



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 265/481 (55%), Gaps = 6/481 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           QV   ++  G+DS   V N+LV  Y K      + +LF  +PE   VS+N++ + Y    
Sbjct: 170 QVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDG 229

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             E+AV  F EM  SG++P EF+ ++++ A  G  D +LG++IH + IK  +  ++F +N
Sbjct: 230 LDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSN 289

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           AL+D Y+K  ++ DA  +F ++   D VS+N +I+G      + +A  LF++++ +  + 
Sbjct: 290 ALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDR 349

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
             F + + L   +     E+GRQ+H   I     S+ +VG  LVDMYAKCG  +EA MIF
Sbjct: 350 KQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIF 409

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             +  ++ + W  +IS ++Q G   E   LF  M +  V  DQ T +++L++ AS  ++ 
Sbjct: 410 TNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLS 469

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQ+H+  +K+ F S+ +  ++L+D Y KCG ++DAV+ F+E    ++V+  +MI+AYA
Sbjct: 470 LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYA 529

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK---QVHVHIIKFGFMS 432
           Q G  E  LK + EM    + PDS     +L+AC++    E+G         I K     
Sbjct: 530 QNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRR 589

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           + +A  S+V+M  + G  ++A++  +E+P D   + WS+++     H   + A +   Q+
Sbjct: 590 EHYA--SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQL 647

Query: 492 L 492
            
Sbjct: 648 F 648



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 222/445 (49%), Gaps = 2/445 (0%)

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           S N ++  Y K GNL +A  +F  +     V+W  +I G         A +LF QM+   
Sbjct: 85  STNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCG 144

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             P+  T+ + L  C G E+     Q+   +IK+   S  IVG  LVD Y K   +D A 
Sbjct: 145 TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 204

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MPE + +++N +I+G+ ++G D +A +LF  M   G+   + T + VL +     
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLD 264

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            I + +Q+H+  +KT F  + ++ N+L+D Y K   V DA K+F E    D V+   +I+
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 324

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA  G  + A  L+ E+Q    +   F  +++L+  +N   +E G+Q+H   I     S
Sbjct: 325 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 384

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +   GNSLV+MYAKCG  ++A+  F+ +  R  V W+AMI    Q G  +E LQ+F +M 
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           +  V+ +  T  S+L A      ++  K    S   K G        + ++D+  + G  
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGK-QLHSFIIKSGFMSNVFSGSALLDVYAKCGSI 503

Query: 553 QEAMELVDTMPFQANASVWGALLGA 577
           ++A++    MP   N   W A++ A
Sbjct: 504 KDAVQTFQEMP-DRNIVSWNAMISA 527



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 232/465 (49%), Gaps = 33/465 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A     D+ LG Q+H  V+ T F  + FV+N+L+  Y+K  + ID+R+LFD +PE+ 
Sbjct: 256 VLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 315

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + S Y      + A   F+E+  +     +F  ++M++  + + D  +GR+IH 
Sbjct: 316 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 375

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I    DS++   N+LVDMYAK G  E+A  +F ++ H   V W A+I+  V     + 
Sbjct: 376 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEE 435

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF +M+ + +  +  T+ S L+A A +    LG+QLH  +IK    S+   G  L+D
Sbjct: 436 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLD 495

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCGS+ +A   F  MP++N+++WN +IS + QNG   EA +           F +  
Sbjct: 496 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG---EAEATLK-------SFKEMV 545

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS +     SF  +GV   + A S     E   +  NS+   Y      E        +S
Sbjct: 546 LSGLQPDSVSF--LGV---LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY------AS 594

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VD++ C S        G   EA KL  EM    I+PD  + SS+LNAC      E  ++
Sbjct: 595 VVDML-CRS--------GRFNEAEKLMAEM---PIDPDEIMWSSVLNACRIHKNQELARR 642

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               +     + D     ++ N+YA  G  ++  +    + DRG+
Sbjct: 643 AADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 687



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 180/371 (48%), Gaps = 35/371 (9%)

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW- 288
           V  + K G + +AR +F  MP KN ++ N++ISG++++G   EA  LF          W 
Sbjct: 59  VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 118

Query: 289 ---------------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
                                M R G   D  T  T+L      +      QV    +K 
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 178

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            ++S   + N+L+D+Y K   ++ A ++FKE   +D V+  +MIT Y++ GL E+A+ L+
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           +EMQ+  + P  F  +++L A   L     G+Q+H  +IK  F+ + F  N+L++ Y+K 
Sbjct: 239 VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 298

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
            S+ DA + F E+P++  VS++ +I G A  G+ K A  +F ++             ++L
Sbjct: 299 DSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATML 358

Query: 508 C-ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
             A N        + H +++      + +  +   ++D+  + GKF+EA E++ T     
Sbjct: 359 SIASNTLDWEMGRQIHAQTIVTTADSEILVGN--SLVDMYAKCGKFEEA-EMIFTNLTHR 415

Query: 567 NASVWGALLGA 577
           +A  W A++ A
Sbjct: 416 SAVPWTAMISA 426


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 311/798 (38%), Positives = 471/798 (59%), Gaps = 41/798 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKA    +DL LG Q+H  V   G      V NSLV MY KCG+   +RR+FD I  R 
Sbjct: 91  VLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRD 150

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL-GRKIH 119
            VSWNS+ +     +  E AV  F+ M+L  + P  F+L S+ +AC+   + LL G+++H
Sbjct: 151 DVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVH 210

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + ++ G D   F+ NALV MYAK+G + +A  +F   +  D+VSWN +I+    ++  +
Sbjct: 211 AFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFE 269

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC-SLIKMEIKSDPIVGVGL 238
            AL     M  S + PN  T  S L AC+ +E+   G+++H   L+  ++  +  VG  L
Sbjct: 270 EALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCAL 329

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFD 297
           VDMY  C   ++ R++F  M  + +  WN +I+G+++N  D EA  LF  M  E G+  +
Sbjct: 330 VDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPN 389

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             TLS+VL +    ++    + +H+  VK  FE D Y+ N+L+D Y + G +E A  IF 
Sbjct: 390 SVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFG 449

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ------------DREIN------PDS 399
             +  D+V+  +MIT Y   G  ++AL L  +MQ            D E N      P+S
Sbjct: 450 SMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNS 509

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               ++L  CA L+A  +GK++H + +K     D   G++LV+MYAKCG ++ +   F +
Sbjct: 510 VTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQ 569

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-----VLPNHITLVSVLCACNHAG 514
           +  R +++W+ +I     HG+G+EAL++F +M+E+G     + PN +T +++  + +H+G
Sbjct: 570 MSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSG 629

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ-ANASVWGA 573
           +V E  + F +M+ K GI+P  +HYAC++D+LGR+G+ +EA  L+ TMP        W +
Sbjct: 630 MVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSS 689

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
           LLGA +I++N+E+G+ AA+ LF ++P     +VL      S         + R MK+  +
Sbjct: 690 LLGACKIHQNLEIGEIAAKNLFVLDP-----NVLDYGTKQSM--------LGRKMKEKGV 736

Query: 634 KKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEE 693
           +KEPG SWIE  D+V+ F  GD SH +SKE++  L+ +S  + K GYVP     LH+V E
Sbjct: 737 RKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGE 796

Query: 694 SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
            EKE +L  HSE+LA+AFGL+ T PG TIRV KNLR+C DCH + +FISKIV REII+RD
Sbjct: 797 EEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRD 856

Query: 754 VNRFHHFRNGSCSCGGYW 771
           V RFHHFRNG+CSCG YW
Sbjct: 857 VRRFHHFRNGTCSCGDYW 874



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 233/467 (49%), Gaps = 32/467 (6%)

Query: 79  EAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALV 138
           +A+  +  MV +G+ P+ F+  +++ A AG  D  LG+++H +  K G        N+LV
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 139 DMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
           +MY K G+++ A  VF +I + D VSWN++I      E  + A+ LF+ M    + P  F
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187

Query: 199 TYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           T  S   AC+ +     LG+Q+H  +++            LV MYAK G + EA+ +F +
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLR-NGDWRTFTNNALVTMYAKLGRVYEAKTLFDV 246

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
             +K+L++WN +IS   QN    EA      M + GV  +  TL++VL + +  + +G  
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306

Query: 318 KQVHALSVKTAFESDDYIVNS-----LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           K++HA        ++D I NS     L+D Y  C   E    +F       +    +MI 
Sbjct: 307 KEIHAF----VLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIA 362

Query: 373 AYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            Y +     EA++L++EM  +  ++P+S   SS+L AC    ++   + +H  ++K+GF 
Sbjct: 363 GYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE 422

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D +  N+L++MY++ G I+ A   F  +  + IVSW+ MI G    GR  +AL +   M
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM 482

Query: 492 --------------LEDG----VLPNHITLVSVLCACNHAGLVAEAK 520
                          ED     + PN +TL++VL  C  A L A  K
Sbjct: 483 QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGC--AALAALGK 527


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 285/675 (42%), Positives = 425/675 (62%), Gaps = 1/675 (0%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L+ +I   A +     G+++H   I  GY    F  N LV+MY+K G L+ A+ +F  +
Sbjct: 7   ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              ++VSW A+I+G   +     A++ F  M+     P  F ++SA++ACA +   E+G+
Sbjct: 67  PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+HC  +K  I S+  VG  L DMY+KCG+M +A  +F  MP K+ ++W  +I G+ + G
Sbjct: 127 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 186

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA   F  M  E V  DQ  L + L +  + +A    + VH+  VK  FESD ++ N
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246

Query: 338 SLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           +L D Y K G +E A  +F  +S   ++V+ T +I  Y +    E+ L +++E++ + I 
Sbjct: 247 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 306

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P+ F  SSL+ ACAN +A EQG Q+H  ++K  F  D F  + LV+MY KCG ++ A +A
Sbjct: 307 PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQA 366

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F EI D   ++W++++    QHG GK+A+++F +M++ GV PN IT +S+L  C+HAGLV
Sbjct: 367 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLV 426

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            E   +F SM+K +G+ P +EHY+C+ID+LGRAG+ +EA E ++ MPF+ NA  W + LG
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 486

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A RI+ + E+G+ AAE L  +EP+ S   VLLSNIYA+   W++V  VR  M+D  +KK 
Sbjct: 487 ACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKL 546

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           PG SW++V  K + F   D SH R   IY KLD + D +  AGYVP  ++   D+++S K
Sbjct: 547 PGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMK 606

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           E+LL+ HSE++AVAF LI+ P G  I VKKNLR+CVDCH++ +FISK+  R+IIVRD +R
Sbjct: 607 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 666

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF +GSCSCG YW
Sbjct: 667 FHHFTDGSCSCGDYW 681



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 263/482 (54%), Gaps = 3/482 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++     K L  G Q+H +++  G+    F+ N LV MY+KCG    + +LFD +P+R+
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW ++ S         EA+  F  M + G  P +F+ SS I ACA  G   +G+++H 
Sbjct: 71  LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G  S++F  + L DMY+K G + DA  VF+++   D VSW A+I G       + 
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  F++M   E+  +     S L AC  ++  + GR +H S++K+  +SD  VG  L D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MY+K G M+ A  +F +  E +N++++  +I G+++     +  S+F  + R+G+  ++ 
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S+++K+ A+  A+    Q+HA  +K  F+ D ++ + L+D YGKCG +E A++ F E 
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEI 370

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                +A  S+++ + Q GLG++A+K++  M DR + P++    SLL  C++    E+G 
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
                + K +G +      + ++++  + G + +A    + +P +     W + +G    
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 490

Query: 478 HG 479
           HG
Sbjct: 491 HG 492



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 126/214 (58%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   L+ V+++ A  + +   KQ+HAL +   +    ++ N L++ Y KCG ++ A+K+F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 +LV+ T+MI+  +Q     EA++ +  M+     P  F  SS + ACA+L + E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GKQ+H   +KFG  S+ F G++L +MY+KCG++ DA + F E+P +  VSW+AMI G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + G  +EAL  F +M+++ V  +   L S L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 2/178 (1%)

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D+   + ++   A      +GKQ+H  +I  G+   TF  N LVNMY+KCG +D A + F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
             +P R +VSW+AMI GL+Q+ +  EA++ F  M   G +P      S + AC   G + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI- 122

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           E       +  KFGI       + + D+  + G   +A ++ + MP +   S W A++
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMI 179


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/745 (39%), Positives = 453/745 (60%), Gaps = 2/745 (0%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D F+AN ++ MY KC +  D+R++FD I +R+  SW+ L  CYV     +EA+  +KEMV
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              I  + ++LSS++ AC    D   GR +   + +LG++ D+  A +L+ ++AK G LE
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 149 DAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           +A +VF+ +    DI+S  A+I   V H  ND AL  + +M+S  + P+ FTY + L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +  +    G+ +H  +++ +   +  V   L+ MYAKCGS+ +++ +F  M  K++++WN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I+ +   G D +A SLF  M   G   D  T S++L + AS + +   + +H      
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            F+ D  + N+LI  + +CG +E A + F      +L A  +M+ AYAQF  G++AL LY
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             M      PD F  SS++++CA+L A  +GK +H      GF  D   G +LVNMYAKC
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKC 420

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           GS+ DA ++F  I ++ +VSWSAMI   AQHG  +EAL++   M   G+  N +T  SVL
Sbjct: 421 GSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 480

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+H G + E   +F  + + FGI+  +E+    ID+LGRAG  +EA  ++ TMPF+ +
Sbjct: 481 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVS 540

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
                 LLG  +++ +V  G+   + + A+EPE   ++VLL+N+YA+AG WD+VAK+RR+
Sbjct: 541 FVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRY 600

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV-SDLLNKAGYVPMVET 686
           M+   +K++ G S IE +DK+Y F+VGD S+ R+ EI A+L+ + S +  + GYVP    
Sbjct: 601 MRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRD 660

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
             HDV + +KE+LL  HSEK+A+ FGLI +PPG+T+R+ KNLR+C DCHT  +  SKI  
Sbjct: 661 VFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITG 720

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           R IIVRD  RFHHF  G CSCG YW
Sbjct: 721 RRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 257/488 (52%), Gaps = 6/488 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           VL ACT   D+  G  V       GF+ D  VA SL+ ++AKCG   ++  +F ++   R
Sbjct: 74  VLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMR 133

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            ++S  ++   YV     + A+  + +M   G+ P+ F+ ++++ AC+     L G+ IH
Sbjct: 134 DIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIH 193

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + ++  +  ++   NAL+ MYAK G+L+D+ ++F  ++  D+VSWNA+IA   L+ H+ 
Sbjct: 194 KHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDK 253

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A  LF +M +    P+++T++S L ACA  +  E GR LH  +       D  +   L+
Sbjct: 254 DAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLI 313

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            M+ +CGS++ AR  F+ + +K L AWN +++ + Q     +A  L+  M  EG   D+ 
Sbjct: 314 SMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRF 373

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S+V+ S AS  A+   K +H  S    FE D  +  +L++ Y KCG + DA K F   
Sbjct: 374 TFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGI 433

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S  D+V+ ++MI A AQ G  EEAL+L   M  + I  +    SS+L+AC++     +G 
Sbjct: 434 SNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGI 493

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
              + + + FG   D       +++  + G + +A+     +P +   V+   ++GG   
Sbjct: 494 DYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKV 553

Query: 478 HG---RGK 482
           HG   RGK
Sbjct: 554 HGDVRRGK 561



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 200/415 (48%), Gaps = 16/415 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC+S   L  G  +H  ++ +    +  V N+L+ MYAKCG+  DS+ LF  +  + 
Sbjct: 176 ILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKD 235

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN++ + Y      ++A   F  M   G  P+ ++ SS++ ACA       GR +H 
Sbjct: 236 VVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHV 295

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G+D D    N L+ M+ + G+LE A   F  IE  ++ +WN ++A     +    
Sbjct: 296 RITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKD 355

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L++ M      P+ FT++S + +CA +     G+ +H        + D I+G  LV+
Sbjct: 356 ALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVN 415

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A+  F  +  K++++W+ +I+   Q+G   EA  L   M  +G+  ++ T
Sbjct: 416 MYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVT 475

Query: 301 LSTVLKSVAS----FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            S+VL + +     ++ I        LS     E D+      ID  G+ G +++A  + 
Sbjct: 476 ASSVLHACSHGGRLYEGI---DYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVL 532

Query: 357 K----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
                + S V LV        +     G+   K  + ++    NP S+V   LLN
Sbjct: 533 HTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPE--NPGSYV---LLN 582


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/789 (38%), Positives = 460/789 (58%), Gaps = 22/789 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVV----------FTGFDSDEFVANSLVVMYAKCGNFIDSR 50
           +L++C   K LF G  +H  ++           T FD        LV +Y  C     +R
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVP---FEKLVDLYIACSELKIAR 71

Query: 51  RLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
            +FD +P R  +VV WN L   Y      EEA+  + +M+  GI PN F+   ++ AC+ 
Sbjct: 72  HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSA 131

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
             ++  GR+IH    +L  +S+++ + ALVD YAK G L+DA  VF  +   D+V+WN++
Sbjct: 132 LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSM 191

Query: 169 IAGCVLHEHN-DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           I+G  LHE + D   +L  QM++ +++PN  T    L A A +     G+++H   ++  
Sbjct: 192 ISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG 250

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLF 286
              D +VG G++D+Y KC  +D AR IF +M   KN + W+ ++  ++      EA  LF
Sbjct: 251 FVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELF 310

Query: 287 PWMYR---EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
             +     + +     TL+TV++  A+   +     +H  ++K+ F  D  + N+L+  Y
Sbjct: 311 CQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMY 370

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            KCG +  A++ F E    D V+ T++I+ Y Q G  EE L+++LEMQ   INP+    +
Sbjct: 371 AKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLA 430

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           S+L ACA+L+    G   H + I  GF +DT   N+L++MYAKCG ID A + F  +  R
Sbjct: 431 SVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKR 490

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
           GIVSW+ MI     HG G EAL +F  M  +G+ P+ +T + ++ AC+H+GLVAE K+ F
Sbjct: 491 GIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWF 550

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN 583
            +M + FGI P  EHYACM+D+L RAG F+E    ++ MP + +  VWGALL A R+YKN
Sbjct: 551 NAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKN 610

Query: 584 VEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
           VE+G+  ++ +  + PE +   VLLSN+Y++ G WD+ A+VR   K+   +K PG SWIE
Sbjct: 611 VELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIE 670

Query: 644 VKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           +   V+TF  G  RSH +  +I  KLDE+   + + GY         DVEE EKE++L +
Sbjct: 671 ISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLY 730

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFG+++  P   I V KNLR+C DCHT+ +FIS +  R+I VRD +RFHHF++
Sbjct: 731 HSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKD 790

Query: 763 GSCSCGGYW 771
           G C+CG +W
Sbjct: 791 GICNCGDFW 799



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 13/213 (6%)

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGN------SLVNMYAKCGSIDDAD 454
           C+ LL +C    +  +GK +H H++K      +T   N       LV++Y  C  +  A 
Sbjct: 12  CTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIAR 71

Query: 455 RAFSEIPDR--GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
             F ++P R   +V W+ +I   A +G  +EA+ ++ +ML  G+ PN  T   VL AC+ 
Sbjct: 72  HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSA 131

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
               +E +       K+  ++        ++D   + G   +A E+ D M  + +   W 
Sbjct: 132 LKEASEGR-EIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKM-HKRDVVAWN 189

Query: 573 ALLGAARIYKNV--EVGQHAAEMLFAIEPEKSS 603
           +++    +++    EV +   +M   + P  S+
Sbjct: 190 SMISGFSLHEGSYDEVARLLVQMQNDVSPNSST 222


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/772 (38%), Positives = 448/772 (58%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC   K L    ++H   +    ++D  V + L  +Y  C   + +RRLFD IP  S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+ WN +   Y      + A+  +  M+  G+RPN+++   ++ AC+G      G +IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++   G +SD+F   ALVD YAK G L +A  +F  + H D+V+WNA+IAGC L+   D 
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  QM+   I PN  T    L      +    G+ LH   ++    +  +VG GL+D
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQT 299
           MYAKC  +  AR IF +M  +N ++W+ +I G++ +    EA  LF  M  ++ +     
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL +VL++ A    +   +++H   +K     D  + N+L+  Y KCG ++DA++ F   
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D V+ +++++   Q G    AL ++  MQ   I+PD      +L AC++L+A + G 
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
             H ++I  GF +DT   N+L++MY+KCG I  A   F+ +    IVSW+AMI G   HG
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G EAL +F  +L  G+ P+ IT + +L +C+H+GLV E +  F++M + F I P  EH 
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+DILGRAG   EA   +  MPF+ +  +W ALL A RI+KN+E+G+  ++ + ++ P
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E +   VLLSNIY++AG WD+ A +R   KD  LKK PG SWIE+   V+ F  GD+SH 
Sbjct: 614 ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHL 673

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           +  +I  KL+E+   + + GY         DVEE EKEQ+L +HSEKLA+AFG++    G
Sbjct: 674 QLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAG 733

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I V KNLR+C DCH + +F++ I  REI VRD NRFHHF+NG+C+CG +W
Sbjct: 734 RPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 161/313 (51%), Gaps = 1/313 (0%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
            Y   L+AC   +     +++H   +K    +D  V   L  +Y  C  +  AR +F  +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P  ++I WN +I  +  NG    A  L+  M   GV  ++ T   VLK+ +   AI    
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H+ +     ESD ++  +L+D Y KCG + +A ++F   S  D+VA  +MI   + +G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           L ++A++L ++MQ+  I P+S     +L       A   GK +H + ++  F +    G 
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVL 497
            L++MYAKC  +  A + F  +  R  VSWSAMIGG       KEAL++F QM L+D + 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 498 PNHITLVSVLCAC 510
           P  +TL SVL AC
Sbjct: 310 PTPVTLGSVLRAC 322


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 292/774 (37%), Positives = 454/774 (58%), Gaps = 5/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           VLKAC ++ D   G +VHG+ V  G D    VAN+L+ MYAKCG    + R+F+ + +  
Sbjct: 170 VLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDA 229

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R V SWNS+ S  V      EA+  F+ M  +G   N ++  +++  CA  G   LGR++
Sbjct: 230 RDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGREL 289

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K G + ++   NAL+ MYAK G ++ A+ VF  I   D +SWN++++  V +   
Sbjct: 290 HAALLKCGSELNI-QCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFY 348

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+  F +M      P+     S   A   +     GR+ H   IK  + +D  VG  L
Sbjct: 349 AEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTL 408

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY KCGS++ +  +F  M  ++ I+W  +++   Q+    EA  +   + +EG+  D 
Sbjct: 409 MDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDS 468

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             + ++L++    ++I + KQVH  +++     D  + N LID YG+CG  + ++ +F+ 
Sbjct: 469 MMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQR 527

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ TSMI      G    A+ L+ EMQ   I PDS    S+L A A LS+  +G
Sbjct: 528 VEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKG 587

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQVH  +I+  F  +    +SLV+MY+ CGS++ A R F     + +V W+AMI     H
Sbjct: 588 KQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMH 647

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GK+A+ +F +ML+ G+ P+H++ +++L AC+H+ LV E KH+ + M  K+ ++P QEH
Sbjct: 648 GHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEH 707

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC++DILGR+G+ +EA E + TMP    ++VW ALLGA R+++N  +   AA  L  +E
Sbjct: 708 YACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELE 767

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+    ++L+SN++A  G W+N  + R  M +  L+K P  SWIE+ + ++TFT GD  H
Sbjct: 768 PDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCH 827

Query: 659 ARSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
             S+ I+ KL E++++L +  GYV      LHD  E EK  +L+ HSE++A+AFGLI+T 
Sbjct: 828 RDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTR 887

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PG  IR+ KNLR+C DCH   + +SK+  R+I+VRD NRFHHF  GSCSC  +W
Sbjct: 888 PGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 310/578 (53%), Gaps = 16/578 (2%)

Query: 14  GLQVHGIVVFTGF---DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           G QVH   V TG    D D F+A  LV MY +CG   D+RRLF+ +P R+V SWN+L   
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 71  YVHCDFLEEAVCFFKEMVLS---GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
           Y+      EA+  +  M  S   G  P+  +L+S++ AC   GD   G ++HG ++K+G 
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSWNAVIAGCVLHEHNDWALKLF 185
           D     ANAL+ MYAK G L+ A+ VF+ ++    D+ SWN+V++GCV +     AL LF
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           + M+S+    N +T  + L+ CA + L  LGR+LH +L+K   + + I    L+ MYAK 
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELN-IQCNALLVMYAKY 314

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G +D A  +F  + EK+ I+WN ++S ++QN    EA   F  M + G   D   + ++ 
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            ++     +   ++ HA ++K    +D  + N+L+D Y KCG +E + K+F+     D +
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           + T+++  +AQ     EAL++ LE+Q   I  DS +  S+L  C  L +    KQVH + 
Sbjct: 435 SWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYA 494

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           I+ G + D    N L+++Y +CG  D +   F  +  + IVSW++MI     +GR   A+
Sbjct: 495 IRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAV 553

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ-PMQEHYACMI 543
            +F +M +  + P+ + LVS+L A      + + K  H   + + F I+ P+    + ++
Sbjct: 554 FLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV---VSSLV 610

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           D+    G    A+ + +    + +  +W A++ A  ++
Sbjct: 611 DMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMH 647


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/773 (38%), Positives = 463/773 (59%), Gaps = 4/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           VLKAC ++ D   G +VHG+ V +G D    VAN+LV MYAKCG    + R+F+ + + R
Sbjct: 169 VLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGR 228

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            V SWNS  S  V      EA+  F+ M   G   N ++   ++  CA       GR++H
Sbjct: 229 DVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELH 288

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K G + ++   NAL+ MYA+ G ++ A+ VF++I   D +SWN++++  V +    
Sbjct: 289 AALLKCGTEFNI-QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYA 347

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+  F +M  +  NP+     S L A   +     GR++H   +K  + SD  +   L+
Sbjct: 348 EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KC S++ +  +F  M  K+ ++W  +I+ + Q+    EA   F    +EG+  D  
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + ++L++ +  ++I + KQVH+ +++     D  + N +ID YG+CG V  A+ IF+  
Sbjct: 468 MMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEML 526

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V  TSM+  +A+ GL  EA+ L+ +M +  I PDS     +L A A LS+  +GK
Sbjct: 527 DKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGK 586

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  +I+  F  +    +SLV+MY+ CGS++ A + F E   + +V W+AMI     HG
Sbjct: 587 EIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHG 646

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GK+A+ +F +MLE GV P+H++ +++L AC+H+ LV E K + + M  K+ +QP QEHY
Sbjct: 647 HGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHY 706

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+LGR+G+ +EA + + +MP +  + VW ALLGA RI+KN E+   A + L  +EP
Sbjct: 707 ACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEP 766

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +    +VL+SN++A  G W+NV ++R  M +  L+K+P  SWIE+ + V+TFT  D SH 
Sbjct: 767 DNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHR 826

Query: 660 RSKEIYAKLDEVSDLLNKAG-YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            S+ I+ KL E+++ L + G YV      LHDV E EK  LL+ HSE+LA++FGLI+T  
Sbjct: 827 DSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTAS 886

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  +R+ KNLR+C DCH   + +SK+  REI+VRD NRFHHF  G+CSCG +W
Sbjct: 887 GTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 188/590 (31%), Positives = 311/590 (52%), Gaps = 14/590 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE---FVANSLVVMYAKCGNFIDSRRLFDAIP 57
           VL     ++ +  G Q+H   V TG   D+   F+A  L+ MY KCG   D+ RLFD +P
Sbjct: 61  VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSL 113
            R+V SWN+L    +      EAV  ++ M  S    G  P+  +L+S++ AC   GD  
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGC 172
            G ++HG ++K G D     ANALV MYAK G L+ A+ VF+ + +  D+ SWN+ I+GC
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           V +     AL LF++M+S   + N +T    L+ CA +     GR+LH +L+K   + + 
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN- 299

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           I    L+ MYA+CG +D A  +F  + +K+ I+WN ++S ++QN    EA   F  M + 
Sbjct: 300 IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G   D   + ++L +V     +   ++VHA +VK   +SD  I N+L+D Y KC  VE +
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECS 419

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            ++F      D V+ T++I  YAQ     EA+  +   Q   I  D  +  S+L AC+ L
Sbjct: 420 ARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGL 479

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            +    KQVH + I+ G + D    N ++++Y +CG +  A   F  +  + IV+W++M+
Sbjct: 480 KSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMV 538

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFG 531
              A++G   EA+ +FG+ML  G+ P+ + LV +L A      + + K  H   +  KF 
Sbjct: 539 NCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFP 598

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           ++      + ++D+    G    A+++ D    + +  +W A++ A  ++
Sbjct: 599 VEGAV--VSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMH 645


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/772 (38%), Positives = 447/772 (57%), Gaps = 2/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +      L  G  +H  V  +    D FV  +LV  Y KCG+  D+R++FD +P RS
Sbjct: 166 VLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRS 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +WNS+ S Y   +   EA   F+ M   G R +  +  S+++AC        G+ +  
Sbjct: 226 VGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRE 285

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +  ++ D+F   AL+ MYA+  + EDA  VF  ++  ++++W+A+I     H H   
Sbjct: 286 SISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGE 345

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKA-CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+ F+ M+   I PN  T+ S L        L+EL R +H  + +  +     +   LV
Sbjct: 346 ALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR-IHLLITEHGLDDTTTMRNALV 404

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           ++Y +C S D+AR +F  +   NLI+WN +I  ++Q     +A  LF  M ++G+  D+ 
Sbjct: 405 NVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRV 464

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
              T+L +          K VH    ++       +  SL++ Y K G ++ A  I +E 
Sbjct: 465 NFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEM 524

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               + A   +I  YA  G   EAL+ Y ++Q   I  D     S+LNAC + ++  +GK
Sbjct: 525 DEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGK 584

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H + ++ G  SD    N+L NMY+KCGS+++A R F  +P R  VSW+ M+   AQHG
Sbjct: 585 MIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHG 644

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +E L++  +M ++GV  N IT VSVL +C+HAGL+AE   +F S+    GI+   EHY
Sbjct: 645 ESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHY 704

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++D+LGRAGK QEA + +  MP +     W +LLGA R+ K+++ G+ AA  L  ++P
Sbjct: 705 GCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDP 764

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             SS  V+LSNIY+  G W N AK+RR M   ++KK PG+S I+VK+KV+ F V D SH 
Sbjct: 765 GNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHP 824

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           R+ EIY K++E+   + +AGYVP  +  LHDV+E +KE LL +HSEKLA+AFGLI+TP  
Sbjct: 825 RAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPET 884

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +++ + KNLR+C DCHT+ +FISKI  REI+VRD +RFHHFR+GSCSC  YW
Sbjct: 885 SSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/579 (28%), Positives = 299/579 (51%), Gaps = 5/579 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C S ++L  G+ VH + +  GF  +  VA +L+ MY KCG  +D++ +F+ + E++
Sbjct: 64  VLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKN 123

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN++   Y +     + AV  F  M+L G++ N  +  +++N+         G+ IH
Sbjct: 124 VVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIH 183

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               +  +  D+F   ALV+ Y K G+L DA  VF  +    + +WN++I+   + E + 
Sbjct: 184 SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSG 243

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A  +FQ+M+      +  T+ S L AC   E  + G+ +  S+ +   + D  VG  L+
Sbjct: 244 EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALI 303

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYA+C S ++A  +F  M + NLI W+ +I+    +G   EA   F  M +EG+  ++ 
Sbjct: 304 TMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRV 363

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L    +   +    ++H L  +   +    + N+L++ YG+C   +DA  +F + 
Sbjct: 364 TFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL 423

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +L++  SMI  Y Q    ++AL+L+  MQ + I PD     ++L AC   S     K
Sbjct: 424 ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRK 483

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            VH  + + G         SLVNMYAK G +D A+    E+ ++ I +W+ +I G A HG
Sbjct: 484 LVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHG 543

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
           R +EAL+ + ++  + +  + +T +SVL AC  +  +AE K  H  ++E       + ++
Sbjct: 544 RSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKN 603

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              + ++  + G  + A  + D+MP ++  S W  +L A
Sbjct: 604 --ALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQA 639



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 281/545 (51%), Gaps = 17/545 (3%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY++CG+  D+   F  I  R+VVSWN + S Y      +EA+  F  M+L G+ PN  +
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L +++N+C    +   G  +H  S++ G+  +   A AL++MY K G L DA +VF+++ 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 159 HPDIVSWNAVIA-----GCVLHEHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGME 211
             ++V+WNA++      GC       W  A++LF +M    +  N+ T+ + L +    +
Sbjct: 121 EKNVVTWNAMLGVYSLQGCC------WKLAVELFTRMLLEGVKANVITFLNVLNSVVDPD 174

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
               G+ +H  + + E   D  V   LV+ Y KCGS+ +AR +F  MP +++  WN +IS
Sbjct: 175 ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 234

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            +  +    EA  +F  M +EG   D+ T  ++L +  + + +   K V     +T+FE 
Sbjct: 235 AYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           D ++  +LI  Y +C   EDA ++F      +L+  +++ITA+A  G   EAL+ +  MQ
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              I P+     SLLN     S  E+  ++H+ I + G    T   N+LVN+Y +C S D
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           DA   F ++    ++SW++MIG   Q  R  +ALQ+F  M + G+ P+ +  +++L AC 
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474

Query: 512 HAGLVAEAKHHFESMEKK-FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
                   K   + +E+   G  P+ +    ++++  +AG+   A  ++  M  Q   + 
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVAEVILQEMDEQ-QITA 531

Query: 571 WGALL 575
           W  L+
Sbjct: 532 WNVLI 536


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 283/766 (36%), Positives = 457/766 (59%), Gaps = 2/766 (0%)

Query: 7   SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS 66
           S K+L      H  ++     +D+FVA  LV  Y+   +   +R +FD   +   +  N+
Sbjct: 41  SSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNA 100

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           +   Y+      E +  F  M    +  +  S +  + ACA S D  +G +I   +++ G
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
            + + F  ++++    K G + +A  VF  + + D+V WN++I G V     D A +LF 
Sbjct: 161 MEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFF 220

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M  S I P+  T TS ++AC G+   +LG+ +H  ++ + + +D +V    VDMY+K G
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMG 280

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            ++ AR +F+ MP +NL++WN +ISG ++NG   E+  LF  + R   GFD TT+ ++L+
Sbjct: 281 DIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQ 340

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
             +   ++   K +H  ++++ FES+  +  +++D Y KCG ++ A  +F      +++ 
Sbjct: 341 GCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVIT 399

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T+M+   AQ G  E+AL+L+ +MQ+  I  +S    SL+++CA+L + ++G+ +H H+ 
Sbjct: 400 WTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLF 459

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEAL 485
           + GF  D     +LV+MYAKCG I+ A+R FS     + +V W++MI G   HG G +A+
Sbjct: 460 RLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAV 519

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            ++ +M+E+G+ PN  T +S+L AC+H+ LV +    F SME+   I+P+++HYAC++D+
Sbjct: 520 GIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDL 579

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           L RAG+F+EA  L++ MPFQ   +V  ALL   R +KN+ +G   ++ L A++      +
Sbjct: 580 LSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIY 639

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           ++LSNIYA A  WD V  +R  M++  LKK PG S +E  + V+TF  GD SH   +EIY
Sbjct: 640 IMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIY 699

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
             L+ +   +  +GYVP     L DV+E  K ++L+ HSE+LA+AFGL+ TP G+ IR+ 
Sbjct: 700 HFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRIT 759

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KNLR+C DCHT  ++ISKIV REIIVRD NRFHHF NG CSCG YW
Sbjct: 760 KNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 270/516 (52%), Gaps = 13/516 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC S  D  +G+++    V  G + + FV +S++    K G   +++R+FD +P + V
Sbjct: 137 LKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDV 196

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V WNS+   YV     + A   F EM  SGI+P+  +++S+I AC G G+  LG+ +HGY
Sbjct: 197 VCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGY 256

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            + LG  +D+    + VDMY+K+G++E A  VF  +   ++VSWNA+I+GCV +     +
Sbjct: 257 VLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGES 316

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             LF ++  S    ++ T  S L+ C+       G+ LH   I+   +S+ I+   +VD+
Sbjct: 317 FDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDL 375

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KCGS+ +A  +F+ M ++N+I W  ++ G  QNG   +A  LF  M  EG+  +  T 
Sbjct: 376 YSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTF 435

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS- 360
            +++ S A   ++   + +H    +  F  D   + +L+D Y KCG +  A +IF   S 
Sbjct: 436 VSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D+V   SMIT Y   G G +A+ +Y +M +  + P+     SLL+AC++    EQG  
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGIS 555

Query: 421 V-----HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           +       H I+   +   +A   LV++ ++ G  ++A     ++P   G     A++ G
Sbjct: 556 LFNSMERDHNIR--PIEKHYA--CLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSG 611

Query: 475 LAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCA 509
              H      +Q   ++L  D + P    ++S + A
Sbjct: 612 CRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYA 647



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 212/413 (51%), Gaps = 21/413 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++AC    +L LG  +HG V+  G  +D  V  S V MY+K G+   +R +F  +P R+
Sbjct: 237 LIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRN 296

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++ S  V    + E+   F  +V S    +  ++ S++  C+ +     G+ +HG
Sbjct: 297 LVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHG 356

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I+  ++S++  + A+VD+Y+K G+L+ A  VF  ++  ++++W A++ G   + H + 
Sbjct: 357 CAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAED 415

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF QM+   I  N  T+ S + +CA +   + GR +H  L ++    D +    LVD
Sbjct: 416 ALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVD 475

Query: 241 MYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MYAKCG ++ A  IF H    K+++ WN +I+G+  +G   +A  ++  M  EG+  +QT
Sbjct: 476 MYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQT 535

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI------VNSLIDAYGKCGHVEDAV 353
           T  ++L + +  + +        +S+  + E D  I         L+D   + G  E+A 
Sbjct: 536 TFLSLLSACSHSRLVE-----QGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQ 590

Query: 354 KI-----FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            +     F+  +AV L A  S    +    LG +     L +    +NP  ++
Sbjct: 591 ALIEKMPFQPGTAV-LEALLSGCRTHKNINLGIQTSDKLLALD--AMNPGIYI 640


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/773 (38%), Positives = 460/773 (59%), Gaps = 16/773 (2%)

Query: 10  DLFLGLQVHGIVVFTG--FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWN 65
           D+ LG  + G ++ TG   ++D  VANSL+ +Y+KC     +R +FD +P   R +VSW 
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 66  SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC-AGSGDSLLGRKIHGYSIK 124
           ++ SC        EA+  F E +  G+ PN F+L +   AC A     L G  + G   K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 125 LGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           LG+  +D+    AL+DM+AK G+L     VF  +    +V W  +I       ++D A++
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           LF  M  +   P+ +T +S L AC  +    LG+QLH   +++ ++SD  V  GLVDMYA
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 244 KC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQT 299
           K     S+  AR +F+ MP+ N++AW  ++SG++Q G  D +   LF  M  EG+  +  
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S++LK+ A+       +Q+H   VK+     + + N+L+  Y + G +E+A   F + 
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++V+ +  +      G G        +++  E+   +F   SL++A A++    +G+
Sbjct: 422 YEKNMVSFSGNLD-----GDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQ 476

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H   +K GF SD   GNSLV+MY++CG + DA + F E+ D  ++SW++MI GLA+HG
Sbjct: 477 RLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHG 536

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
               AL++F  M+  GV PN +T ++VL AC+HAGLV E K HF  M+K  G+ P  EHY
Sbjct: 537 YAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHY 596

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+LGR+G  ++A++ ++ MP Q +A VW  LLGA + + N+++G+ AA  +  +EP
Sbjct: 597 ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEP 656

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +  + +VLLSN+YA AG+WD VA++R  M+D  L KE G+SW+ V + ++ F  GD SH 
Sbjct: 657 QDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHP 716

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA-TPP 718
           +++EIY KL+ +   +   GYVP     LHD+ +  KE  L  HSEK+AVAFGLI+ T  
Sbjct: 717 QAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSA 776

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              IR+ KNLR+CVDCH++ +++SK   REII+RD NRFH  ++G CSCG YW
Sbjct: 777 TKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/773 (38%), Positives = 467/773 (60%), Gaps = 2/773 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDS--DEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
            +L+ C ++ D   G  VHG VV +G  +  D F AN L+ MY K G F  + R+FD +PE
Sbjct: 434  LLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPE 493

Query: 59   RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            R++VS+ +L   +      EEA   F+ +   G   N+F L++++          L   +
Sbjct: 494  RNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGV 553

Query: 119  HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
            H  + KLG+D + F  +AL+D Y+  G + DA  VF  I   D V+W A+++    ++  
Sbjct: 554  HACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCP 613

Query: 179  DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            +  L++F +M+ +    N F  TS L+A   +    LG+ +H   +K    ++  V   L
Sbjct: 614  ENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGAL 673

Query: 239  VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
            +DMYAKCG++++AR+ F ++   ++I W+++IS + Q   + +A  LF  M R  V  ++
Sbjct: 674  LDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNE 733

Query: 299  TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +LS+VL++ A+   + + KQ+H  ++K   ES+ ++ N+LID Y KC  +E +++IF  
Sbjct: 734  FSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSS 793

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               V+ V+  ++I  Y++ G GE AL ++ EM+   +       SS+L ACA+ ++    
Sbjct: 794  LRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHV 853

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
             QVH  I K  F SDT   NSL++ YAKCG I DA   F  + +  +VSW+A+I G A H
Sbjct: 854  GQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVH 913

Query: 479  GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
            G+   A ++F  M ++ +  N IT V++L  C   GLV++    F+SM    GI+P  EH
Sbjct: 914  GQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEH 973

Query: 539  YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            Y C++ +LGRAG+  +A+  +  +P   +A VW ALL +  ++KNVE+G+ +AE +  IE
Sbjct: 974  YTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIE 1033

Query: 599  PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
            P+  +T+VLLSN+Y++AG  D VA  R+ M++  ++KEPG+SW+E+K +V+ F+VG   H
Sbjct: 1034 PQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDH 1093

Query: 659  ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
               + I A L+ ++    + GYVP  +  LHD+EE +K ++L+ HSE+LA+A+GL+ TPP
Sbjct: 1094 PCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPP 1153

Query: 719  GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G  IR+ KNLR C+DCH  F+ ISKIV +EIIVRD+NRFHHF  G+CSCG YW
Sbjct: 1154 GHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 294/591 (49%), Gaps = 33/591 (5%)

Query: 20  IVVFTGFD-SDEFVANSLVVMYAKCGNFID--SRRLFDAI-----PERSVVSWNSLFSCY 71
           +V+  GF+ S  FVA  L+   A     I   SRRL  A      P R  ++ N+     
Sbjct: 353 VVLVGGFEKSGPFVAGPLLPPAAVVAGMIRRLSRRLHSAFFNQAPPRRRDLAANAAL--- 409

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG--YDS 129
               +LE+ +         G+  + ++ + ++  C   GD+  GR +HG+ ++ G     
Sbjct: 410 ---QWLEDELTSLA-FPWPGV--DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARL 463

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D+F AN L++MY KVG    A  VF  +   ++VS+  ++ G  L    + A  LFQ+++
Sbjct: 464 DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                 N F  T+ LK    M+   L   +H    K+    +  VG  L+D Y+ CG + 
Sbjct: 524 WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVS 583

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +AR +F  +  K+ +AW  ++S + +N        +F  M       +   L++VL++  
Sbjct: 584 DARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAV 643

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              ++ + K +HA SVKT ++++ ++  +L+D Y KCG++EDA   F+  +  D++  + 
Sbjct: 644 CLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSL 703

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI+ YAQ    E+A +L++ M    ++P+ F  SS+L ACAN+   + GKQ+H H IK G
Sbjct: 704 MISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIG 763

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
             S+ F GN+L+++YAKC  ++ +   FS + D   VSW+ +I G ++ G G+ AL +F 
Sbjct: 764 HESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFR 823

Query: 490 QMLEDGVLPNHITLVSVLCAC------NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           +M    V    +T  SVL AC      NH G V     H    +  F    +  +   +I
Sbjct: 824 EMRAASVPSTQVTYSSVLRACASTASINHVGQV-----HCLIEKSTFNSDTIVSN--SLI 876

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
           D   + G  ++A E+ +T+  + +   W A++    ++    + Q   +M+
Sbjct: 877 DSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAMAQELFDMM 926


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/785 (38%), Positives = 472/785 (60%), Gaps = 16/785 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           +LK+C   +D  LG  VH  ++    + D  + NSL+ +Y+K G+   +  +F+ +    
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           +R VVSW+++ +CY +     +A+  F E +  G+ PN++  +++I AC+ S    +GR 
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 118 IHGYSIKLG-YDSDMFSANALVDMYAKVGN-LEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
             G+ +K G ++SD+    +L+DM+ K  N  E+A  VF  +   ++V+W  +I  C+  
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A++ F  M  S    + FT +S   ACA +E   LG+QLH   I+  +  D  V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305

Query: 236 VGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYR 291
             LVDMYAKC   GS+D+ R +F  M + ++++W  +I+G+++N     EA +LF  M  
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365

Query: 292 EG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           +G V  +  T S+  K+  +     V KQV   + K    S+  + NS+I  + K   +E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           DA + F+  S  +LV+  + +    +    E+A KL  E+ +RE+   +F  +SLL+  A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           N+ +  +G+Q+H  ++K G   +    N+L++MY+KCGSID A R F+ + +R ++SW++
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G A+HG     L+ F QM+E+GV PN +T V++L AC+H GLV+E   HF SM +  
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
            I+P  EHYACM+D+L RAG   +A E ++TMPFQA+  VW   LGA R++ N E+G+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           A  +  ++P + + ++ LSNIYA AG W+   ++RR MK+  L KE G SWIEV DK++ 
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV----EESEKEQLLYHHSEK 706
           F VGD +H  + +IY +LD +   + + GYVP  +  LH +    +E+EKE+LLY HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCS 766
           +AVAFGLI+T     +RV KNLR+C DCH + ++IS +  REI++RD+NRFHHF++G CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845

Query: 767 CGGYW 771
           C  YW
Sbjct: 846 CNDYW 850



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 253/510 (49%), Gaps = 15/510 (2%)

Query: 77  LEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           L  AV     M   GIRP +  + SS++ +C  + D  LG+ +H   I+   + D    N
Sbjct: 42  LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           +L+ +Y+K G+   A  VF+ +      D+VSW+A++A    +     A+K+F +     
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKC-GSMDE 250
           + PN + YT+ ++AC+  +   +GR     L+K    +SD  VG  L+DM+ K   S + 
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F  M E N++ W ++I+  +Q G   EA   F  M   G   D+ TLS+V  + A 
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVAC 367
            + + + KQ+H+ ++++    D  +  SL+D Y KC   G V+D  K+F       +++ 
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339

Query: 368 TSMITAYAQ-FGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           T++IT Y +   L  EA+ L+ EM  +  + P+ F  SS   AC NLS    GKQV    
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
            K G  S++   NS+++M+ K   ++DA RAF  + ++ +VS++  + G  ++   ++A 
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           ++  ++ E  +  +  T  S+L    + G + + +    S   K G+   Q     +I +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGE-QIHSQVVKLGLSCNQPVCNALISM 518

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALL 575
             + G    A  + + M    N   W +++
Sbjct: 519 YSKCGSIDTASRVFNFME-NRNVISWTSMI 547


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 284/675 (42%), Positives = 423/675 (62%), Gaps = 1/675 (0%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L+ +I   A +     G+++H   I  GY    F  N LV+MY+K G L+ A+ +F  +
Sbjct: 7   ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              ++VSW A+I+G   +     A++ F  M+     P  F ++SA++ACA +   E+G+
Sbjct: 67  PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+HC  +K  I S+  VG  L DMY+KCG+M +A  +F  MP K+ ++W  +I G+ + G
Sbjct: 127 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 186

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA   F  M  E V  DQ  L + L +  + +A    + VH+  VK  FESD ++ N
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246

Query: 338 SLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           +L D Y K G +E A  +F  +S   ++V+ T +I  Y +    E+ L +++E++ + I 
Sbjct: 247 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 306

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P+ F  SSL+ ACAN +A EQG Q+H  ++K  F  D F  + LV+MY KCG ++ A +A
Sbjct: 307 PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQA 366

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F EI D   ++W++++    QHG GK+A++ F +M++ GV PN IT +S+L  C+HAGLV
Sbjct: 367 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLV 426

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            E   +F SM+K +G+ P +EHY+C+ID+LGRAG+ +EA E ++ MPF+ NA  W + LG
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 486

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A RI+ + E+G+ AAE L  +EP+ S   VLLSNIYA+   W++V  VR  M+D  +KK 
Sbjct: 487 ACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKL 546

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           PG SW++V  K + F   D SH R   IY KLD + D +  AGYVP  ++   D+++  K
Sbjct: 547 PGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMK 606

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           E+LL+ HSE++AVAF LI+ P G  I VKKNLR+CVDCH++ +FISK+  R+IIVRD +R
Sbjct: 607 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 666

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF +GSCSCG YW
Sbjct: 667 FHHFTDGSCSCGDYW 681



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 262/482 (54%), Gaps = 3/482 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++     K L  G Q+H +++  G+    F+ N LV MY+KCG    + +LFD +P+R+
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW ++ S         EA+  F  M + G  P +F+ SS I ACA  G   +G+++H 
Sbjct: 71  LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G  S++F  + L DMY+K G + DA  VF+++   D VSW A+I G       + 
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  F++M   E+  +     S L AC  ++  + GR +H S++K+  +SD  VG  L D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MY+K G M+ A  +F +  E +N++++  +I G+++     +  S+F  + R+G+  ++ 
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S+++K+ A+  A+    Q+HA  +K  F+ D ++ + L+D YGKCG +E A++ F E 
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEI 370

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                +A  S+++ + Q GLG++A+K +  M DR + P++    SLL  C++    E+G 
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
                + K +G +      + ++++  + G + +A    + +P +     W + +G    
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 490

Query: 478 HG 479
           HG
Sbjct: 491 HG 492



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 126/214 (58%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   L+ V+++ A  + +   KQ+HAL +   +    ++ N L++ Y KCG ++ A+K+F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 +LV+ T+MI+  +Q     EA++ +  M+     P  F  SS + ACA+L + E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GKQ+H   +KFG  S+ F G++L +MY+KCG++ DA + F E+P +  VSW+AMI G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + G  +EAL  F +M+++ V  +   L S L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 2/178 (1%)

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D+   + ++   A      +GKQ+H  +I  G+   TF  N LVNMY+KCG +D A + F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
             +P R +VSW+AMI GL+Q+ +  EA++ F  M   G +P      S + AC   G + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI- 122

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           E       +  KFGI       + + D+  + G   +A ++ + MP +   S W A++
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMI 179


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 293/771 (38%), Positives = 447/771 (57%), Gaps = 28/771 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT  +    G Q+HG+V+  GF S+ +V N+LV +Y++ GN   + ++F  + +R 
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+NSL S      ++  A+  FK+M L   +P+  +++S+++ACA  G    G++ H 
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y+IK G  SD+    +L+D+Y K  +++ A   F      D +               + 
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNL---------------NK 421

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           + ++F QM+   I PN FTY S LK C  +   +LG Q+H  ++K   + +  V   L+D
Sbjct: 422 SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLID 481

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK G +D A  IF  + E ++++W  +I+G+ Q+    EA +LF  M  +G+  D   
Sbjct: 482 MYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIG 541

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++ + + A  QA+   +Q+HA S  + +  D  I N+L+  Y +CG V +A   F +  
Sbjct: 542 FASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY 601

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D V+  S+++ +AQ G  EEAL ++ +M    +  +SF   S ++A AN++    GKQ
Sbjct: 602 AKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ 661

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I K G+ S+T   N+L+ +YAKCG+IDD             +SW++MI G +QHG 
Sbjct: 662 IHGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGC 708

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL++F  M +  VLPNH+T V VL AC+H GLV E   +F SM +   + P  EHYA
Sbjct: 709 GFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYA 768

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+LGR+G    A   V+ MP Q +A VW  LL A  ++KN+++G+ AA  L  +EP+
Sbjct: 769 CVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPK 828

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+T+VL+SN+YA +G WD   + R+ MKD  +KKEPG SW+EV + V+ F  GD++H R
Sbjct: 829 DSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPR 888

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           +  IY  L  +     + GYVP   + L D E  +K+     HSE+LA+AFGL++     
Sbjct: 889 ADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSST 948

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + V KNLR+C DCH   + +SKI  R IIVRD  RFHHF+ GSCSC  YW
Sbjct: 949 PLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 282/555 (50%), Gaps = 31/555 (5%)

Query: 1   VLKACTSKKDLFLGL-QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+ C+     F  + Q+H   + +GF+S  F+ N L+ +Y K G    ++++F+ +  R
Sbjct: 169 VLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKAR 228

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSW ++ S      + EEA+  F ++VLS     EF                 G+++H
Sbjct: 229 DSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEF--------------FEFGKQLH 274

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K G+ S+ +  NALV +Y++ GNL  A  +F  +   D VS+N++I+G     + +
Sbjct: 275 GLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 334

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LF++M      P+  T  S L ACA +     G+Q H   IK  + SD +V   L+
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLL 394

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KC  +  A   F             +  G L N    ++  +F  M  EG+  +Q 
Sbjct: 395 DLYVKCSDIKTAHEFF-------------LCYGQLDNLN--KSFQIFTQMQIEGIVPNQF 439

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++LK+  +  A  + +Q+H   +KT F+ + Y+ + LID Y K G ++ A+KIF+  
Sbjct: 440 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL 499

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ T+MI  Y Q     EAL L+ EMQD+ I  D+   +S ++ACA + A +QG+
Sbjct: 500 KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGR 559

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H      G+  D   GN+LV++YA+CG + +A  AF +I  +  VSW++++ G AQ G
Sbjct: 560 QIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSG 619

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +EAL +F QM + G+  N  T  S + A  +   V   K     M +K G     E  
Sbjct: 620 YFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGK-QIHGMIRKTGYDSETEVS 678

Query: 540 ACMIDILGRAGKFQE 554
             +I +  + G   +
Sbjct: 679 NALITLYAKCGTIDD 693



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 168/628 (26%), Positives = 298/628 (47%), Gaps = 76/628 (12%)

Query: 36  LVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN 95
           L+  Y   G+   +  +FD +P RS+  WN +F+ ++    +      F+ M+   +  +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 96  EFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           E   + ++  C+G+  S     +IH  +I  G++S  F  N L+D+Y K G L  A  VF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
           ++++  D VSW A+I+G   + + + A+ LF Q+               L AC  +E  E
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G+QLH  ++K    S+  V   LV +Y++ G++  A  IFH M +++ +++N +ISG  
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           Q G    A +LF  M  +    D  T++++L + AS  A+   KQ H+ ++K    SD  
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           +  SL+D Y KC  ++ A + F                 Y Q     ++ +++ +MQ   
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEG 433

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           I P+ F   S+L  C  L A + G+Q+H  ++K GF  + +  + L++MYAK G +D A 
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN--- 511
           + F  + +  +VSW+AMI G  QH +  EAL +F +M + G+  ++I   S + AC    
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553

Query: 512 --------HA------------------------GLVAEAKHHFESMEKKFGIQPMQEHY 539
                   HA                        G V EA   F+ +  K  +      +
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-----W 608

Query: 540 ACMIDILGRAGKFQEAMELVDTMP---FQANASVWGALLGAARIYKNVEVGQHAAEML-- 594
             ++    ++G F+EA+ +   M     + N+  +G+ + AA    NV +G+    M+  
Sbjct: 609 NSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRK 668

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVA 622
              + E   ++ L++ +YA  G  D+++
Sbjct: 669 TGYDSETEVSNALIT-LYAKCGTIDDIS 695



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 205/427 (48%), Gaps = 50/427 (11%)

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G+ L+D Y   G ++ A  +F  MP ++L  WN + +  +          LF  M  + V
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 295 GFDQTTLSTVLK----SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
            FD+   + VL+    +  SF+ +   +Q+HA ++ + FES  +I N LID Y K G + 
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFV---EQIHAKTITSGFESSTFICNPLIDLYFKNGFLS 216

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A K+F+   A D V+  +MI+  +Q G  EEA+ L+              C  +L+AC 
Sbjct: 217 SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLF--------------CQIVLSACT 262

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
            +  +E GKQ+H  ++K GF S+T+  N+LV +Y++ G++  A++ F  +  R  VS+++
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           +I GLAQ G    AL +F +M  D   P+ +T+ S+L AC   G +   K  F S   K 
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGK-QFHSYAIKA 381

Query: 531 G--------------------IQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANA 568
           G                    I+   E + C   +D L ++ +    M++   +P   N 
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVP---NQ 438

Query: 569 SVWGALLGAARIYKNVEVGQ--HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
             + ++L         ++G+  H   +    +     + VL+ ++YA  G  D+  K+ R
Sbjct: 439 FTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI-DMYAKHGKLDHALKIFR 497

Query: 627 FMKDNKL 633
            +K+N +
Sbjct: 498 RLKENDV 504


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/774 (37%), Positives = 465/774 (60%), Gaps = 10/774 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +  +CT      L  ++H ++V +G     F++  LV +YA  G+   SR  FD I  + 
Sbjct: 82  LFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKD 138

Query: 61  VVSWNSLFSCYVHCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V +WNS+ S YV      EA+ CF++ ++++  + + ++   ++ AC    D   GRKIH
Sbjct: 139 VYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIH 195

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            +  KLG+  D+F A +L+ MY++ G +  A ++F D+   D+ SWNA+I+G + + +  
Sbjct: 196 CWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 255

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL +  +M+   IN +  T  S L  CA +        +H  +IK  ++ +  V   L+
Sbjct: 256 QALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALI 315

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MYAK G++ +A+ +F  M  +++++WN +I+ + QN   + A   F  M   G+  D  
Sbjct: 316 NMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLL 375

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKE 358
           TL ++    A  +     + VH   ++  +  +  ++ N+++D Y K G ++ A K+F  
Sbjct: 376 TLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNL 435

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQ 417
               D+V+  ++I+ Y Q GL  EA+++Y  M++ REI  +     S+L A A++ A +Q
Sbjct: 436 IPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQ 495

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G ++H H+IK     D F G  L+++Y KCG + DA   F ++P    V W+A+I     
Sbjct: 496 GMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGI 555

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG G++AL++F +M ++GV P+H+T +S+L AC+H+GLV E K  F  M++ +GI+P  +
Sbjct: 556 HGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLK 614

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CM+D+LGRAG  + A + +  MP   +AS+WGALLGA RI+ N+E+G+ A++ LF +
Sbjct: 615 HYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEV 674

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           + E    +VLLSNIYA+ G W+ V KVR   ++  LKK PG S IEV  +V  F  G++S
Sbjct: 675 DSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQS 734

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H + KEIYA+L  ++  +   GY+P     L DVEE EKE +L  HSE+LA+AFG+I+TP
Sbjct: 735 HPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTP 794

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P + IR+ KNLR+C DCH + +FIS+I  REI+VRD  RFHHF+NG CSCG YW
Sbjct: 795 PKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 263/509 (51%), Gaps = 16/509 (3%)

Query: 96  EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           E   +S+ ++C     +LL +++H   +  G     F +  LV++YA +G++  +   F 
Sbjct: 76  EIDFNSLFDSCT---KTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFD 132

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKE 214
            I+  D+ +WN++I+  V + H   A+  F Q +  ++   + +T+   LKAC  +    
Sbjct: 133 QIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTL---V 189

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            GR++HC + K+  + D  V   L+ MY++ G +  AR +F  MP +++ +WN +ISG +
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLI 249

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           QNG   +A  +   M  EG+  D  T++++L   A    I     +H   +K   E + +
Sbjct: 250 QNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELF 309

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+LI+ Y K G++ DA K+F++    D+V+  S+I AY Q      A   + +MQ   
Sbjct: 310 VSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNG 369

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF-MSDTFAGNSLVNMYAKCGSIDDA 453
           + PD     SL +  A    Y+  + VH  I++ G+ M     GN++++MYAK G ID A
Sbjct: 370 LEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSA 429

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNH 512
            + F+ IP + +VSW+ +I G  Q+G   EA++++  M E   +  N  T VS+L A  H
Sbjct: 430 HKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAH 489

Query: 513 AGLVAEA-KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            G + +  + H   ++    +        C+ID+ G+ G+  +AM L   +P +++   W
Sbjct: 490 VGALQQGMRIHGHLIKTNLHLDVFVG--TCLIDLYGKCGRLVDAMCLFYQVPRESSVP-W 546

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            A++    I+ +   G+ A ++   ++ E
Sbjct: 547 NAIISCHGIHGH---GEKALKLFREMQDE 572


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/720 (41%), Positives = 443/720 (61%), Gaps = 4/720 (0%)

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           DA     ++  N   S Y+H       +  F +MV S +  ++ +   M+ A A   DSL
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML-ATAVKVDSL 331

Query: 114 -LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            LG+++H  ++KLG D  +  +N+L++MY K+     A  VF ++   D++SWN+VIAG 
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSD 231
             +     A+ LF Q+    + P+ +T TS LKA + + E   L +Q+H   IK+   SD
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             V   L+D Y++   M EA ++F      +L+AWN +++G+ Q+    +   LF  M++
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           +G   D  TL+TV K+     AI   KQVHA ++K+ ++ D ++ + ++D Y KCG +  
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A   F      D VA T+MI+   + G  E A  ++ +M+   + PD F  ++L  A + 
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L+A EQG+Q+H + +K    +D F G SLV+MYAKCGSIDDA   F  I    I +W+AM
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           + GLAQHG GKE LQ+F QM   G+ P+ +T + VL AC+H+GLV+EA  H  SM   +G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I+P  EHY+C+ D LGRAG  ++A  L+++M  +A+AS++  LL A R+  + E G+  A
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             L  +EP  SS +VLLSN+YA+A  WD +   R  MK +K+KK+PG SWIEVK+K++ F
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIF 870

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
            V DRS+ +++ IY K+ ++   + + GYVP  +  L DVEE EKE+ LY+HSEKLAVAF
Sbjct: 871 VVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAF 930

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GL++TPP   IRV KNLR+C DCH + ++I+K+ +REI++RD NRFH F++G CSCG YW
Sbjct: 931 GLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 188/640 (29%), Positives = 303/640 (47%), Gaps = 40/640 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C     ++     HG     G D DEFVA +LV +Y K G   + + LF+ +P R 
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WN +   Y+   F EEA+        SG+ PNE +L  +      SGD         
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI---SGD--------- 258

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                  DSD     +  +     GN  DA +V       +I+  N  ++  +       
Sbjct: 259 -------DSDAGQVKSFAN-----GN--DASSV------SEIIFRNKGLSEYLHSGQYSA 298

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LK F  M  S++  +  T+   L     ++   LG+Q+HC  +K+ +     V   L++
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K      AR +F  M E++LI+WN VI+G  QNG ++EA  LF  + R G+  DQ T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418

Query: 301 LSTVLKSVASF-QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +++VLK+ +S  + + + KQVH  ++K    SD ++  +LIDAY +   +++A  +F E 
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              DLVA  +M+  Y Q   G + LKL+  M  +    D F  +++   C  L A  QGK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           QVH + IK G+  D +  + +++MY KCG +  A  AF  IP    V+W+ MI G  ++G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
             + A  +F QM   GVLP+  T+ ++  A +    + + +  H  +++      P    
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG- 656

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEML-FA 596
              ++D+  + G   +A  L   +    N + W A+L G A+  +  E  Q   +M    
Sbjct: 657 -TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           I+P+K +   +LS    S  + +    +R    D  +K E
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 247/526 (46%), Gaps = 39/526 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+   +  DL LG   H  ++    + + F+ N+L+ MY+KCG+   +RR+FD +P+R +
Sbjct: 46  LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105

Query: 62  VSWNSLFSCYVH-----CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           VSWNS+ + Y        + +++A   F+ +    +  +  +LS M+  C  SG      
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
             HGY+ K+G D D F A ALV++Y K G +++   +F+++ + D+V WN ++   +   
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + A+ L     SS +NPN  T            L+ L R          I  D     
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEIT------------LRLLAR----------ISGDD-SDA 262

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           G V  +A          I         I  N  +S +L +G        F  M    V  
Sbjct: 263 GQVKSFANGNDASSVSEI---------IFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           DQ T   +L +     ++ + +QVH +++K   +    + NSLI+ Y K      A  +F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL-SAY 415
              S  DL++  S+I   AQ GL  EA+ L++++    + PD +  +S+L A ++L    
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
              KQVHVH IK   +SD+F   +L++ Y++   + +A+  F E  +  +V+W+AM+ G 
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGY 492

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
            Q   G + L++F  M + G   +  TL +V   C     + + K 
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ 538



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 222/520 (42%), Gaps = 55/520 (10%)

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
           S D +LG+  H   +    + + F  N L+ MY+K G+L  A  VF  +   D+VSWN++
Sbjct: 52  SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111

Query: 169 IAG------CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           +A       CV+ E+   A  LF+ ++   +  +  T +  LK C            H  
Sbjct: 112 LAAYAQSSECVV-ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
             K+ +  D  V   LV++Y K G + E +++F  MP ++++ WN+++  +L+ G   EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             L    +  G+  ++ TL  + +                         DD         
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLAR----------------------ISGDD--------- 259

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
               G V+        SS  +++     ++ Y   G     LK + +M + ++  D    
Sbjct: 260 -SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTF 318

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
             +L     + +   G+QVH   +K G        NSL+NMY K      A   F  + +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE 378

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH--AGLVAEAK 520
           R ++SW+++I G+AQ+G   EA+ +F Q+L  G+ P+  T+ SVL A +    GL    +
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQ 438

Query: 521 HHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            H  +++    I  + + +    +ID   R    +EA  L +   F   A  W A++   
Sbjct: 439 VHVHAIK----INNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVA--WNAMMAG- 491

Query: 579 RIYKNVEVGQHAAEMLFAI--EPEKSSTHVLLSNIYASAG 616
             Y     G H    LFA+  +  + S    L+ ++ + G
Sbjct: 492 --YTQSHDG-HKTLKLFALMHKQGERSDDFTLATVFKTCG 528


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/813 (35%), Positives = 480/813 (59%), Gaps = 49/813 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           VL +C+S  D+  G  +H  +  + F+ D  V N+L+ MY KC + +D+R +F+++   +
Sbjct: 13  VLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQ 72

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+VVSWN++ + Y       EA+  +  M L G+  +  +  S++ AC+       GR+I
Sbjct: 73  RNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREI 129

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H      G DS    ANALV MYA+ G++ DA  +F+ ++  D  SWNAVI   + H  +
Sbjct: 130 HNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI---LAHSQS 186

Query: 179 -DW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            DW  AL++F++MK  ++ PN  TY + +   +  E+   GR++H  ++     SD +V 
Sbjct: 187 GDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA 245

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L++MY KCGS  EAR +F  M ++++++WN++I  ++QNG   EA  L+  +  EG  
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFK 305

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             + T  ++L + +S +A+   + VH+  ++   +S+  +  +L++ Y KCG +E+A K+
Sbjct: 306 RTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKV 365

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEA-------------------------------- 383
           F      D VA +++I AYA  G G++A                                
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAV 425

Query: 384 --LKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
             +K++ EM     + PD+    ++L ACA+L    + K +H  I +    S+    N+L
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           +NMYA+CGS+++A+R F+   ++ +VSW+AM+   +Q+GR  EAL +F +M  +GV P+ 
Sbjct: 486 INMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDD 545

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T  S+L  C H G + +   +F  M +  G+ P  +H+A M+D+LGR+G+  +A EL++
Sbjct: 546 VTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLE 605

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
           +MPF+ +   W   L A RI+  +E+G+ AAE ++ ++P  ++ ++ +SNIYA+ GMW+ 
Sbjct: 606 SMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEK 665

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           VA VR+ M++  LKK PG+S+IEV  K++ F+ G + H R+ EI  +L  +  L+  AGY
Sbjct: 666 VASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGY 725

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP-PGATIRVKKNLRICVDCHTSFE 739
           VP  +  LHDV E EKE +L +HSEK+A+AFGL+++   G  IRV KNLR+C DCHT+ +
Sbjct: 726 VPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATK 785

Query: 740 FISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
           FI++I  R+II+RD NRFH F  +G CSCG YW
Sbjct: 786 FIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 266/529 (50%), Gaps = 49/529 (9%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           +P+  +  +++ +C+  GD   GR +H       ++ D    NAL+ MY K  +L DA +
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 153 VFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           VF+  D    ++VSWNA+IA    + H+  AL L+ +M    +  +  T+ S L AC+ +
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                GR++H  +    + S   +   LV MYA+ GS+ +A+ +F  +  ++  +WN VI
Sbjct: 124 ---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
             H Q+G    A  +F  M +  +  + TT   V+   ++ + +   +++HA  V   F+
Sbjct: 181 LAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY--L 388
           SD  +  +LI+ YGKCG   +A ++F +    D+V+   MI  Y Q G   EAL+LY  L
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M+  +    +FV  S+L AC+++ A  QG+ VH HI++ G  S+     +LVNMYAKCG
Sbjct: 300 DMEGFKRTKATFV--SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE------------------------- 483
           S+++A + F+ + +R  V+WS +IG  A +G GK+                         
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITT 417

Query: 484 ---------ALQMFGQML-EDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGI 532
                    A+++F +M    G+ P+ +T ++VL AC   G ++E K  H +  E +   
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
             +  +   +I++  R G  +EA  L      +   S W A++ A   Y
Sbjct: 478 NVVVTN--TLINMYARCGSLEEAERLFAAAKEKTVVS-WTAMVAAFSQY 523



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 21/207 (10%)

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           DR+  PD+    ++L +C++     +G+ +H  I    F  DT  GN+L++MY KC S+ 
Sbjct: 2   DRQ--PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLV 59

Query: 452 DADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           DA   F  +    R +VSW+AMI   AQ+G   EAL ++ +M   G+  +H+T VSVL A
Sbjct: 60  DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119

Query: 510 CNHAGLVAEAKHH-FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           C+      E  +  F S     G+   Q     ++ +  R G   +A  +  ++  +   
Sbjct: 120 CSSLAQGREIHNRVFYS-----GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174

Query: 569 SVWGALL----------GAARIYKNVE 585
           S W A++          GA RI+K ++
Sbjct: 175 S-WNAVILAHSQSGDWSGALRIFKEMK 200


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/775 (38%), Positives = 463/775 (59%), Gaps = 28/775 (3%)

Query: 10  DLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-RSVVSWNSL 67
           DL LG  +H  ++     D D  VANSL+ +Y++CG    +R +FD +   R +VSW ++
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG-----SGDSLLGRKIHGYS 122
            SC        E++    EM+ SG+ PN ++L ++ +AC           ++   +H   
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVH--- 179

Query: 123 IKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            K+G + +D+   +AL+DM A+ G+L  A  VF  +    +V W  +I+  V  E  + A
Sbjct: 180 -KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +++F         P+ +T +S + AC  +    LG QLH   ++M   SD  V  GLVDM
Sbjct: 239 VEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDM 298

Query: 242 YAKCG---SMDEARMIFHLMPEKNLIAWNIVISGHLQNG-GDMEAASLFPWMYREGVGFD 297
           YAK     +MD A  +F  M + ++I+W  +ISG++Q+G  + +   LF  M  E +  +
Sbjct: 299 YAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPN 358

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S++LK+ A+       +QVHA  +K+   +   + N+L+  Y + G +E+A ++F 
Sbjct: 359 HITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFN 418

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEA-LKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +     +++C +          G +A L   +   D  I+  +F  +SL++A A++    
Sbjct: 419 QLYERSMISCITE---------GRDAPLDHRIGRMDMGISSSTF--ASLISAAASVGMLT 467

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G+Q+H   +K GF SD F  NSLV+MY++CG ++DA R+F+E+ DR ++SW++MI GLA
Sbjct: 468 KGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLA 527

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           +HG  + AL +F  M+  GV PN +T ++VL AC+H GLV E K +F SM++  G+ P  
Sbjct: 528 KHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRM 587

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYACM+D+L R+G  +EA+E ++ MP +A+A VW  LLGA R + N+EVG+ AA+ +  
Sbjct: 588 EHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIE 647

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP   + +VLLSN+YA AG+WD VA++R  M+DN L KE G+SW+EV++  + F  GD 
Sbjct: 648 LEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDT 707

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH R+++IY KLD +   +   GYVP     LHD+ +  KEQ L  HSEK+AVAFGLI T
Sbjct: 708 SHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITT 767

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
                IR+ KNLR+C DCH++ +++SK   REII+RD NRFH  ++G CSCG YW
Sbjct: 768 SAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 235/463 (50%), Gaps = 37/463 (7%)

Query: 110 GDSLLGRKIHGYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNA 167
           GD  LGR +H   ++    D D   AN+L+ +Y++ G +  A  VF  +    DIVSW A
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI--- 224
           + +    +     +L L  +M  S + PN +T  +   AC          +L+C +    
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC-------FPHELYCLVGGVV 174

Query: 225 -----KMEI-KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
                KM +  +D  VG  L+DM A+ G +  AR +F  + EK ++ W ++IS ++Q   
Sbjct: 175 LGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGEC 234

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             EA  +F     +G   D+ T+S+++ +     ++ +  Q+H+L+++  F SD  +   
Sbjct: 235 AEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCG 294

Query: 339 LIDAYGKCGHVEDAV----KIFKESSAVDLVACTSMITAYAQFGLGE-EALKLYLEMQDR 393
           L+D Y K  ++E A+    K+F+     D+++ T++I+ Y Q G+ E + + L+ EM + 
Sbjct: 295 LVDMYAK-SNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNE 353

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I P+    SS+L ACAN+S ++ G+QVH H+IK    +    GN+LV+MYA+ G +++A
Sbjct: 354 SIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEA 413

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            R F+++ +R ++S           GR        G+M + G+  +  T  S++ A    
Sbjct: 414 RRVFNQLYERSMIS-------CITEGRDAPLDHRIGRM-DMGISSS--TFASLISAAASV 463

Query: 514 GLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           G++ + +  H  +++  FG      +   ++ +  R G  ++A
Sbjct: 464 GMLTKGQQLHAMTLKAGFGSDRFVSN--SLVSMYSRCGYLEDA 504


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/773 (37%), Positives = 458/773 (59%), Gaps = 4/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           VLKA   + D   G +VHG+ V  G D   FVAN+L+ MYAKCG    + R+F+ + + R
Sbjct: 170 VLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGR 229

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            V SWNS+ S  +      +A+  F+ M  + +  N ++   ++  C       LGR++H
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELH 289

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K G + ++   NAL+ MY K G ++ A+ VF++I+  D +SWN++++  V +    
Sbjct: 290 AALLKSGSEVNI-QCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYA 348

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A++   +M      P+     S   A   +     G+++H   IK  + SD  VG  L+
Sbjct: 349 EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLM 408

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KC  ++ +  +F  M  K+ I+W  +I+ + Q+   +EA  +F    +EG+  D  
Sbjct: 409 DMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + ++L++ +  + I + KQ+H  +++     D  + N +ID YG+CG V  ++K+F+  
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETV 527

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V  TSMI  YA  GL  EAL L+ EMQ  ++ PDS    S+L A   LS+  +GK
Sbjct: 528 EQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGK 587

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH  +I+  F  +    +SLV+MY+ CGS+  A + F+ +  + +V W+AMI     HG
Sbjct: 588 EVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHG 647

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GK+A+ +F +ML+ GV P+H++ +++L AC+H+ LV E K + + M   + ++P QEHY
Sbjct: 648 HGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHY 707

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+LGR+G+ +EA E + +MP +  + VW +LLGA R++KN E+   AA  L  +EP
Sbjct: 708 ACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEP 767

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +    +VL+SN++A  G W+N  +VR  + +  L+K+P  SWIE+ + V+TFT  D SH 
Sbjct: 768 DNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHR 827

Query: 660 RSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            ++ I  KL E+++ L K  GY     + LHDV E EK  +L+ HSE+LA++FGLI T P
Sbjct: 828 DAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRP 887

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  +R+ KNLR+C DCH   + +SK+  R+I+VRD NRFHHF  GSCSCG +W
Sbjct: 888 GMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 316/588 (53%), Gaps = 12/588 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           VL    +KK +  G+QVH   V TG     D F+A  L+ MY KCG   D+R LFD +  
Sbjct: 64  VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS---GIRPNEFSLSSMINACAGSGDSLLG 115
           R+V SWN+L   Y+      EA+  ++ M LS   G+ P+  +L+S++ A    GD   G
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVL 174
            ++HG ++K G D   F ANAL+ MYAK G L+ A+ VF+ + +  D+ SWN++I+GC+ 
Sbjct: 184 CEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQ 243

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +     AL LF+ M+ + ++ N +T    L+ C  +    LGR+LH +L+K   + + I 
Sbjct: 244 NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN-IQ 302

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY KCG +D A  +F  + EK+ I+WN ++S ++QNG   EA      M R G 
Sbjct: 303 CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   + ++  +V     +   K+VHA ++K   +SD  + N+L+D Y KC ++E +  
Sbjct: 363 QPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAH 422

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F      D ++ T++IT YAQ     EAL+++ E Q   I  D  +  S+L AC+ L  
Sbjct: 423 VFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLET 482

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
               KQ+H + I+ G + D    N ++++Y +CG +  + + F  +  + IV+W++MI  
Sbjct: 483 ILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINC 541

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ 533
            A  G   EAL +F +M    V P+ + LVS+L A      +A+ K  H   + + F ++
Sbjct: 542 YANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHME 601

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
             +   + ++D+    G    A+++ + +  + +  +W A++ A  ++
Sbjct: 602 --EAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMH 646


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 288/740 (38%), Positives = 457/740 (61%), Gaps = 1/740 (0%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N++++ Y K GN   +R LFD++ +RSVV+W  L   Y   +   EA   F +M   G+
Sbjct: 76  TNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGM 135

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            P+  +L+++++            ++HG+ +K+GYDS +   N+L+D Y K  +L  A  
Sbjct: 136 VPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACH 195

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +FK +   D V++NA++ G      N  A+ LF +M+     P+ FT+ + L A   M+ 
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            E G+Q+H  ++K     +  V   L+D Y+K   + EAR +F+ MPE + I++N++I+ 
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
              NG   E+  LF  +        Q   +T+L   A+   + + +Q+H+ ++ T   S+
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISE 375

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             + NSL+D Y KC    +A +IF + +    V  T++I+ Y Q GL E+ LKL++EM  
Sbjct: 376 VLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHR 435

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
            +I  DS   +S+L ACANL++   GKQ+H  II+ G +S+ F+G++LV+MYAKCGSI +
Sbjct: 436 AKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKE 495

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A + F E+P R  VSW+A+I   AQ+G G  AL+ F QM+  G+ PN ++ +S+LCAC+H
Sbjct: 496 ALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSH 555

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
            GLV E   +F SM + + ++P +EHYA M+D+L R+G+F EA +L+  MPF+ +  +W 
Sbjct: 556 CGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWS 615

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++L + RI+KN E+   AA+ LF ++  + ++ +V +SNIYA+AG WD+V KV++ +++ 
Sbjct: 616 SILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRER 675

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            ++K P  SW+E+K K + F+  D SH ++KEI  KLDE+   + + GY P     LH+V
Sbjct: 676 GIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNV 735

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E  K + L +HSE++A+AF LI+TP G+ I V KNLR C DCH + + ISKIV+REI V
Sbjct: 736 DEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITV 795

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD +RFHHF +GSCSC  YW
Sbjct: 796 RDSSRFHHFTDGSCSCKDYW 815



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 264/481 (54%), Gaps = 6/481 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           QVHG VV  G+DS   V NSL+  Y K  +   +  LF  + E+  V++N+L + Y    
Sbjct: 160 QVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEG 219

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           F  +A+  F +M   G RP+EF+ ++++ A     D   G+++H + +K  +  ++F AN
Sbjct: 220 FNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVAN 279

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           AL+D Y+K   + +A  +F ++   D +S+N +I  C  +   + +L+LF++++ +  + 
Sbjct: 280 ALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDR 339

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
             F + + L   A     E+GRQ+H   I  +  S+ +VG  LVDMYAKC    EA  IF
Sbjct: 340 RQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIF 399

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             +  ++ + W  +ISG++Q G   +   LF  M+R  +G D  T +++L++ A+  ++ 
Sbjct: 400 ADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLT 459

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQ+H+  +++   S+ +  ++L+D Y KCG +++A+++F+E    + V+  ++I+AYA
Sbjct: 460 LGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYA 519

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH---VHIIKFGFMS 432
           Q G G  AL+ + +M    + P+S    S+L AC++    E+G Q       + K     
Sbjct: 520 QNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRR 579

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           + +A  S+V+M  + G  D+A++  + +P +   + WS+++     H   + A++   Q+
Sbjct: 580 EHYA--SMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQL 637

Query: 492 L 492
            
Sbjct: 638 F 638



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 221/470 (47%), Gaps = 43/470 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A     D+  G QVH  VV   F  + FVAN+L+  Y+K    +++R+LF  +PE  
Sbjct: 246 VLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVD 305

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+N L +C      +EE++  F+E+  +     +F  +++++  A S +  +GR+IH 
Sbjct: 306 GISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHS 365

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I     S++   N+LVDMYAK     +A  +F D+ H   V W A+I+G V    ++ 
Sbjct: 366 QAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHED 425

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKLF +M  ++I  +  TY S L+ACA +    LG+QLH  +I+    S+   G  LVD
Sbjct: 426 GLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVD 485

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ EA  +F  MP +N ++WN +IS + QNG    A   F  M   G+  +  +
Sbjct: 486 MYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVS 545

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L           C   H                        CG VE+ ++ F   +
Sbjct: 546 FLSIL-----------CACSH------------------------CGLVEEGLQYFNSMT 570

Query: 361 AVDLVAC-----TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            V  +        SM+    + G  +EA KL   M      PD  + SS+LN+C      
Sbjct: 571 QVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARM---PFEPDEIMWSSILNSCRIHKNQ 627

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           E   +    +     + D     S+ N+YA  G  D   +    + +RGI
Sbjct: 628 ELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGI 677



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 238/496 (47%), Gaps = 16/496 (3%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD----SDMFSANALVDMYA 142
           M+ +G  PN    +  +      GD    RK+        +D     ++ S N ++  Y 
Sbjct: 33  MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKL--------FDEMPHKNVISTNTMIMGYL 84

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K GNL  A ++F  +    +V+W  +I G   H     A  LF  M    + P+  T  +
Sbjct: 85  KSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLAT 144

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            L      E      Q+H  ++K+   S  +V   L+D Y K  S+  A  +F  M EK+
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            + +N +++G+ + G + +A +LF  M   G    + T + VL +      I   +QVH+
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             VK  F  + ++ N+L+D Y K   + +A K+F E   VD ++   +IT  A  G  EE
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEE 324

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           +L+L+ E+Q    +   F  ++LL+  AN    E G+Q+H   I    +S+   GNSLV+
Sbjct: 325 SLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVD 384

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MYAKC    +A+R F+++  +  V W+A+I G  Q G  ++ L++F +M    +  +  T
Sbjct: 385 MYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSAT 444

Query: 503 LVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
             S+L AC N A L    + H  S   + G        + ++D+  + G  +EA+++   
Sbjct: 445 YASILRACANLASLTLGKQLH--SRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQE 502

Query: 562 MPFQANASVWGALLGA 577
           MP + N+  W AL+ A
Sbjct: 503 MPVR-NSVSWNALISA 517


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 279/723 (38%), Positives = 430/723 (59%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           + RLF  +PE++ VSWN+L + Y      ++ +  F +M     + ++F+LS+++  CA 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
           +G    G+ +H  +++ G + D F   +LVDMY+K G + DA+ VF  I +PD+V+W+A+
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           I G     H   A +LF  M+     PN FT +S +     M     G+ +H  + K   
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
           +SD +V   L+ MY K   +++   +F  M   +L++WN ++SG   +        +F  
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M  EG   +  T  +VL+S +S       KQVHA  +K + + DD++  +L+D Y K   
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +EDA   F      D+ + T +I+ YAQ    E+A+K + +MQ   I P+ +  +S L+ 
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C++++  E G+Q+H   +K G   D F G++LV++Y KCG ++ A+  F  +  R IVSW
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           + +I G +QHG+G++AL+ F  ML +G++P+  T + VL AC+  GLV E K  F+SM K
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
            +GI P  EHYACM+DILGRAGKF E    ++ M     + +W  +LGA +++ NV+ G+
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGE 543

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
            AA+ LF +EP   S+++LLSNI+AS G WD+V  +R  M    +KKEPG SW+EV  +V
Sbjct: 544 KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQV 603

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F   D SH + +EIYAKLD++   L   GYVP  E  LH+V   EK + LY+HSE+LA
Sbjct: 604 HVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLA 663

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           ++F L++T     IR+ KNLRIC DCH   + IS I ++EI+VRD+ RFHHF+ G+CSC 
Sbjct: 664 LSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQ 723

Query: 769 GYW 771
             W
Sbjct: 724 DRW 726



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/563 (30%), Positives = 286/563 (50%), Gaps = 37/563 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C +   L  G  +H + + +G + DEF+  SLV MY+KCG   D+ ++F  I    
Sbjct: 57  VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPD 116

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+++ +        +EA   F  M   G RPN+F+LSS+++     GD   G+ IHG
Sbjct: 117 VVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G++SD   +N L+ MY K   +ED   VF+ + +PD+VSWNA+++G    +    
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
             ++F QM      PNMFT+ S L++C+ +   E G+Q+H  +IK     D  VG  LVD
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +++A + F  +  +++ +W ++ISG+ Q     +A   F  M REG+  ++ T
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L++ L   +    +   +Q+HA++VK     D ++ ++L+D YGKCG +E A  IFK   
Sbjct: 357 LASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D+V+  ++I+ Y+Q G GE+AL+ +  M    I PD      +L+AC+ +   E+GK+
Sbjct: 417 SRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
                 +F  MS  +  N  +  YA                         M+  L + G+
Sbjct: 477 ------RFDSMSKIYGINPSIEHYA------------------------CMVDILGRAGK 506

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE-HY 539
             E      +M    + P  +   +VL AC   G V   +   ++ +K F ++PM +  Y
Sbjct: 507 FNEVKIFIEEM---NLTPYSLIWETVLGACKLHGNVDFGE---KAAKKLFEMEPMMDSSY 560

Query: 540 ACMIDILGRAGKFQEAMELVDTM 562
             + +I    G++ +   +   M
Sbjct: 561 ILLSNIFASKGRWDDVRNIRALM 583



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 200/375 (53%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +E A  +F  +   + VSWNA++ G          LKLF +MK  E   + FT ++ LK 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA       G+ LH   ++   + D  +G  LVDMY+KCG++ +A  +F  +   +++AW
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           + +I+G  Q G   EAA LF  M R+G   +Q TLS+++ +  +   +   + +H    K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
             FESD+ + N LI  Y K   VED  K+F+  +  DLV+  ++++ +          ++
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + +M      P+ F   S+L +C++L   E GKQVH HIIK     D F G +LV+MYAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
              ++DA  AF  + +R I SW+ +I G AQ  + ++A++ F QM  +G+ PN  TL S 
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360

Query: 507 LCACNHAGLVAEAKH 521
           L  C+H   +   + 
Sbjct: 361 LSGCSHMATLENGRQ 375


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/772 (37%), Positives = 451/772 (58%), Gaps = 2/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  +K +  G +V  I+  +G   D  +   LV MY KCG+  + R +FD + E  
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN + S Y       E++  FK+M+  GI+PN ++ SS++   A       GR++HG
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              KLG++S     N+L+  Y     +  A  +F ++   D++SWN++I+G V +  +D 
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLV 239
            +++F +M    ++ ++ T  +   ACA +    LG+ LH   IK   +  +      L+
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KCG ++ A  +F  M EK +++W  +I+G+++ G    A  LF  M   GV  D  
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            ++++L + A    +   K VH    +   E++ ++ N+L D Y KCG ++DA  +F   
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+++  +MI  Y +  L  EAL L+ EMQ RE  PD    + +L ACA+L+A ++G+
Sbjct: 516 KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQ-RESKPDGTTVACILPACASLAALDKGR 574

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H + ++ G+  D +  N++V+MY KCG +  A   F  IP++ +VSW+ MI G   HG
Sbjct: 575 EIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHG 634

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G EA+  F QM   G+ P+ ++ +S+L AC+H+GL+ E    F  M+K+  I+P  EHY
Sbjct: 635 YGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHY 694

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+L R G   +A + +  MP + +A++WGALL   RI+ +V++ +  AE +F +EP
Sbjct: 695 ACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEP 754

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E +  +VLL+NIYA A  W+ V K+R+ +    LKK PG SWIE+K K+  F  GD S  
Sbjct: 755 ENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKP 814

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           ++K+I   L  +   + + GY P     L + +E EKE  L  HSEKLA+AFG++  PPG
Sbjct: 815 QAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPG 874

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            TIRV KNLR+C DCH   +F+SK  SREII+RD +RFHHF++GSCSC GYW
Sbjct: 875 KTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 271/545 (49%), Gaps = 14/545 (2%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S++  CA       GR++       G   D      LV MY K G+L++   VF  +   
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
            I  WN +I+      +   ++ LF+QM    I PN +T++S LK  A +   E GRQ+H
Sbjct: 215 KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             + K+   S   V   L+  Y     +  A+ +F  + ++++I+WN +ISG+++NG D 
Sbjct: 275 GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FESDDYIVNSL 339
               +F  M   GV  D  T+  V  + A+   + + K +H+ S+K A  + +    N+L
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG +  A+++F+      +V+ TSMIT Y + GL + A+KL+ EM+ R + PD 
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           +  +S+LNACA     + GK VH +I +    +++F  N+L +MYAKCGS+ DA   FS 
Sbjct: 455 YAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSH 514

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           +  + ++SW+ MIGG  ++    EAL +F +M  +   P+  T+  +L AC  A L A  
Sbjct: 515 MKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPAC--ASLAALD 571

Query: 520 K-HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
           K         + G    +     ++D+  + G    A  L D +P +   S W  ++   
Sbjct: 572 KGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVS-WTVMIAGY 630

Query: 579 RI--YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS--AGMWDNVAKVRRFMKDNKLK 634
            +  Y +  +       +  IEP++ S    +S +YA   +G+ D   K+   MK  + +
Sbjct: 631 GMHGYGSEAINTFNQMRMTGIEPDEVS---FISILYACSHSGLLDEGWKIFNIMK-KECQ 686

Query: 635 KEPGM 639
            EP +
Sbjct: 687 IEPNL 691



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 200/389 (51%), Gaps = 3/389 (0%)

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
           S   N ++  Y S L+ CA  +    GR++   +    +  D I+GV LV MY KCG + 
Sbjct: 143 SQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLK 202

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           E RM+F  + E  +  WN++IS +  +G   E+ +LF  M   G+  +  T S++LK  A
Sbjct: 203 EGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFA 262

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +   +   +QVH L  K  F S + +VNSLI  Y     V  A K+F E +  D+++  S
Sbjct: 263 AVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNS 322

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI+ Y + GL +  ++++++M    ++ D     ++  ACAN+     GK +H + IK  
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA 382

Query: 430 FM-SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            +  +    N+L++MY+KCG ++ A R F  + ++ +VSW++MI G  + G    A+++F
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
            +M   GV+P+   + S+L AC   G +   K   + + +   ++        + D+  +
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN-NLETNSFVSNALTDMYAK 501

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGA 577
            G  ++A ++   M  + +   W  ++G 
Sbjct: 502 CGSMKDAHDVFSHMK-KKDVISWNTMIGG 529


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 421/692 (60%), Gaps = 2/692 (0%)

Query: 82  CF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
           CF  F+E++  G RP+ ++L  +I AC    +  +GR IH    K G D D F   ALVD
Sbjct: 14  CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 73

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MY K   +EDA  +F  ++  D+V+W  +I G       + +L LF++M+   + P+   
Sbjct: 74  MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 133

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
             + + ACA +      R +   + + + + D I+G  ++DMYAKCG ++ AR IF  M 
Sbjct: 134 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME 193

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           EKN+I+W+ +I+ +  +G   +A  LF  M   G+  D+ TL+++L + +  + + + + 
Sbjct: 194 EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRL 253

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H +  K   + D ++  +L+D YGKC  +EDA  +F +    DLV  T MI  YA+ G 
Sbjct: 254 IHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGN 313

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
             E+L L+ +M++  + PD     +++ ACA L A  + + +  +I +  F  D   G +
Sbjct: 314 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 373

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           +++M+AKCG ++ A   F  + ++ ++SWSAMI     HG+G++AL +F  ML  G+LPN
Sbjct: 374 MIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPN 433

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            ITLVS+L AC+HAGLV E    F  M + + ++   +HY C++D+LGRAG+  EA++L+
Sbjct: 434 KITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLI 493

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           ++M  + +  +WGA LGA R +K+V + + AA  L  ++P+    ++LLSNIYA+AG W+
Sbjct: 494 ESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWE 553

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +VAK R  M   +LKK PG +WIEV +K + F+VGD +H RSKEIY  L  + + L   G
Sbjct: 554 DVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVG 613

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           YVP     LHDV+E  K  +LY HSEKLA+AFGLIATP    IR+ KNLR+C DCHT  +
Sbjct: 614 YVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCK 673

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +S I  R IIVRD NRFHHF+ G+CSCG YW
Sbjct: 674 LVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 252/482 (52%), Gaps = 6/482 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC   K+L +G  +H IV   G D D FV  +LV MY KC    D+R LFD + ER 
Sbjct: 36  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 95

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+W  +   Y  C    E++  F++M   G+ P++ ++ +++ ACA  G     R I  
Sbjct: 96  LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 155

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +  +  D+    A++DMYAK G +E A  +F  +E  +++SW+A+IA    H     
Sbjct: 156 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 215

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF+ M SS + P+  T  S L AC+ ++  ++GR +H  + K  +  D  V   LVD
Sbjct: 216 ALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 275

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC  +++AR +F  MPE++L+ W ++I G+ + G   E+  LF  M  EGV  D+  
Sbjct: 276 MYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 335

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + TV+ + A   A+   + +     +  F+ D  +  ++ID + KCG VE A +IF    
Sbjct: 336 MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 395

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++++ ++MI AY   G G +AL L+  M    I P+     SLL AC++    E+G +
Sbjct: 396 EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLR 455

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP---DRGIVSWSAMIGGLA 476
               + + +   +D      +V++  + G +D+A +    +    D G+  W A +G   
Sbjct: 456 FFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL--WGAFLGACR 513

Query: 477 QH 478
            H
Sbjct: 514 TH 515



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 166/313 (53%), Gaps = 10/313 (3%)

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           ++ G  + G  +     F  + R G   D  TL  V+++    + + + + +H +  K  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            + D ++  +L+D Y KC  +EDA  +F +    DLV  T MI  YA+ G   E+L L+ 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M++  + PD     +++ ACA L A  + + +  +I +  F  D   G ++++MYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ++ A   F  + ++ ++SWSAMI     HG+G++AL +F  ML  G+LP+ ITL S+L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 509 ACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPF 564
           AC+    +   +  HH   +  KFG+    +H+ C  ++D+ G+  + ++A  L D MP 
Sbjct: 241 ACSDLKNLQMGRLIHH---IVYKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKMP- 294

Query: 565 QANASVWGALLGA 577
           + +   W  ++G 
Sbjct: 295 ERDLVTWTVMIGG 307


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/781 (36%), Positives = 451/781 (57%), Gaps = 35/781 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIP 57
           +++ C        G  +H  ++  G++ D ++   ++++YA+ G   D   +R+LF+ +P
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           ER++ +WN++   Y   D   EA   F  M+  G+ P+ F+ +S +  C        G++
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 196

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H   I  G+  D F  NAL+DMYAK  + E  + VF ++   + V+WN++I+      H
Sbjct: 197 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 256

Query: 178 NDWALKLFQQMKSSE--INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            + AL LF +M+ SE  I P+ FT+T+ L  CA       GRQ+H  LI+  I  + IV 
Sbjct: 257 FNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 316

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LV MY++CG ++ A+ IF+ M E+N  +WN +I G+ QNG   EA  LF  M   G+ 
Sbjct: 317 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 376

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  +LS++L S  S       +++H   V+   E +  +   L+D Y KCG ++ A K+
Sbjct: 377 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 436

Query: 356 FKESSAVDLVAC--TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           + ++   D       S++  YA  GL +E+   +LEM + +I  D     +++N     +
Sbjct: 437 YDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLET 496

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A                         LV+MY+KCG+I  A   F  +  + IVSW+AMI 
Sbjct: 497 A-------------------------LVDMYSKCGAITKARTVFDNMNGKNIVSWNAMIS 531

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G ++HG  KEAL ++ +M + G+ PN +T +++L AC+H GLV E    F SM++ + I+
Sbjct: 532 GYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 591

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
              EHY CM+D+LGRAG+ ++A E V+ MP +   S WGALLGA R++K++++G+ AA+ 
Sbjct: 592 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQR 651

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF ++P+    +V++SNIYA+AG W  V  +R+ MK   +KK+PG+SWIE+  ++  F  
Sbjct: 652 LFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHA 711

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVP---MVETDLHDVEESEKEQLLYHHSEKLAVA 710
           G ++H +++EIY  L  ++      GY+P    +  ++ D++E E+E+ L  HSE+LA++
Sbjct: 712 GSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALS 771

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
            GLI+ P  +TIRV KNLRIC DCHT+ +FISKI  R II RD NRFHHF NG CSCG Y
Sbjct: 772 LGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDY 831

Query: 771 W 771
           W
Sbjct: 832 W 832



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 5/120 (4%)

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD- 452
           ++NP  +  SSL+  C + +++++GK +H  +I  G+  D +    ++ +YA+ G +DD 
Sbjct: 68  DVNPLPY--SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125

Query: 453 --ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             A + F E+P+R + +W+ MI   A+     EA  +F +ML+ GV P++ T  S L  C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 291/772 (37%), Positives = 455/772 (58%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ +C   KD  LG Q+ G VV +G +S   V NSL+ M    GN   +  +FD + ER 
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWNS+ + Y     +EE+   F  M       N  ++S++++          GR IHG
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K+G+DS +   N L+ MYA  G   +A  VFK +   D++SWN+++A  V    +  
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L   M SS  + N  T+TSAL AC   +  E GR LH  ++   +  + I+G  LV 
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K G M E+R +   MP ++++AWN +I G+ ++    +A + F  M  EGV  +  T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465

Query: 301 LSTVLKS-VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           + +VL + +     +   K +HA  V   FESD+++ NSLI  Y KCG +  +  +F   
Sbjct: 466 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +++   +M+ A A  G GEE LKL  +M+   ++ D F  S  L+A A L+  E+G+
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   +K GF  D+F  N+  +MY+KCG I +  +      +R + SW+ +I  L +HG
Sbjct: 586 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 645

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +E    F +MLE G+ P H+T VS+L AC+H GLV +   +++ + + FG++P  EH 
Sbjct: 646 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 705

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C+ID+LGR+G+  EA   +  MP + N  VW +LL + +I+ N++ G+ AAE L  +EP
Sbjct: 706 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 765

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E  S +VL SN++A+ G W++V  VR+ M    +KK+   SW+++KDKV +F +GDR+H 
Sbjct: 766 EDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 825

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           ++ EIYAKL+++  L+ ++GYV      L D +E +KE  L++HSE+LA+A+ L++TP G
Sbjct: 826 QTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEG 885

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T+R+ KNLRIC DCH+ ++F+S+++ R I++RD  RFHHF  G CSC  YW
Sbjct: 886 STVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 293/581 (50%), Gaps = 8/581 (1%)

Query: 1   VLKACTSKKDLFL-GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++ AC     +F  G+QVHG V  +G  SD +V+ +++ +Y   G    SR++F+ +P+R
Sbjct: 64  LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSW SL   Y      EE +  +K M   G+  NE S+S +I++C    D  LGR+I 
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K G +S +   N+L+ M   +GN++ A  +F  +   D +SWN++ A    + H +
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 243

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            + ++F  M+      N  T ++ L     ++ ++ GR +H  ++KM   S   V   L+
Sbjct: 244 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYA  G   EA ++F  MP K+LI+WN +++  + +G  ++A  L   M   G   +  
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ++ L +  +       + +H L V +    +  I N+L+  YGK G + ++ ++  + 
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYEQG 418
              D+VA  ++I  YA+    ++AL  +  M+   ++ +     S+L+AC       E+G
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K +H +I+  GF SD    NSL+ MYAKCG +  +   F+ + +R I++W+AM+   A H
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+E L++  +M   GV  +  +    L A     ++ E +     +  K G +     
Sbjct: 544 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLGFEHDSFI 602

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASV--WGALLGA 577
           +    D+  + G   E  E+V  +P   N S+  W  L+ A
Sbjct: 603 FNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISA 640



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 273/540 (50%), Gaps = 2/540 (0%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY K G    +R LFD +P R+ VSWN++ S  V      E + FF++M   GI+P+ F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 99  LSSMINACAGSGDSLL-GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           ++S++ AC  SG     G ++HG+  K G  SD++ + A++ +Y   G +  +  VF+++
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              ++VSW +++ G       +  + +++ M+   +  N  + +  + +C  ++ + LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+   ++K  ++S   V   L+ M    G++D A  IF  M E++ I+WN + + + QNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              E+  +F  M R     + TT+ST+L  +         + +H L VK  F+S   + N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+  Y   G   +A  +FK+    DL++  S++ ++   G   +AL L   M     + 
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           +    +S L AC     +E+G+ +H  ++  G   +   GN+LV+MY K G + ++ R  
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
            ++P R +V+W+A+IGG A+     +AL  F  M  +GV  N+IT+VSVL AC   G + 
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E      +     G +  +     +I +  + G    + +L + +    N   W A+L A
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 539


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 290/813 (35%), Positives = 478/813 (58%), Gaps = 49/813 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           VL +C+S  D+  G  +H  +  + F+ D  V N+L+ MY KC + +D+R +F+++   +
Sbjct: 13  VLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQ 72

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+VVSWN++ + Y       EA+  +  M L G+  +  +  S++ AC+       GR+I
Sbjct: 73  RNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREI 129

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H      G DS    ANALV MYA+ G++ DA  +F+ ++  D  SWNAVI   + H  +
Sbjct: 130 HNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI---LAHSQS 186

Query: 179 -DW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            DW  AL++F++MK  ++ PN  TY + +   +  E+   GR++H  ++     +D +V 
Sbjct: 187 GDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA 245

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L++MY KCGS  EAR +F  M ++++++WN++I  ++ NG   EA  L+  +  EG  
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFK 305

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             + T  ++L + +S +A+   + VH+  ++   +S+  +  +L++ Y KCG +E+A K+
Sbjct: 306 RTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKV 365

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEA-------------------------------- 383
           F      D VA +++I AYA  G G++A                                
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAV 425

Query: 384 --LKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
             +K++ EM     + PD+    ++L ACA+L    + K +H  I +    S+    N+L
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           +NMYA+CGS+++A+R F+   ++ +VSW+AM+   +Q+GR  EAL +F +M  +GV P+ 
Sbjct: 486 INMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDD 545

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T  S+L  C H G + +   +F  M +   + P  +H+A M+D+LGR+G+  +A EL++
Sbjct: 546 VTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLE 605

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
           +MPF+ +   W   L A RI+  +E+G+ AAE ++ ++P  ++ ++ +SNIYA+ GMW+ 
Sbjct: 606 SMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEK 665

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           VA VR+ M++  LKK PG+S+IEV  K++ F+ G + H R+ EI  +L  +  L+  AGY
Sbjct: 666 VASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGY 725

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP-PGATIRVKKNLRICVDCHTSFE 739
           VP  +  LHDV E EKE +L +HSEK+A+AFGL+++   G  IRV KNLR+C DCHT+ +
Sbjct: 726 VPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATK 785

Query: 740 FISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
           FI++I  R+IIVRD NRFH F  +G CSCG YW
Sbjct: 786 FIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 266/529 (50%), Gaps = 49/529 (9%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           +P+  +  +++ +C+  GD + GR +H       ++ D    NAL+ MY K  +L DA +
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 153 VFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           VF+  D    ++VSWNA+IA    + H+  AL L+ +M    +  +  T+ S L AC+ +
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                GR++H  +    + S   +   LV MYA+ GS+ +A+ +F  +  ++  +WN VI
Sbjct: 124 ---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
             H Q+G    A  +F  M +  V  + TT   V+   ++ + +   +++HA  V   F+
Sbjct: 181 LAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY--L 388
           +D  +  +LI+ YGKCG   +A ++F +    D+V+   MI  Y   G   EAL+LY  L
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M+  +    +FV  S+L AC+++ A  QG+ VH HI++ G  S+     +LVNMYAKCG
Sbjct: 300 DMEGFKRTKATFV--SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE------------------------- 483
           S+++A + F+ + +R  V+WS +IG  A +G GK+                         
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITT 417

Query: 484 ---------ALQMFGQML-EDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGI 532
                    A+++F +M    G+ P+ +T ++VL AC   G ++E K  H +  E +   
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
             +  +   +I++  R G  +EA  L      +   S W A++ A   Y
Sbjct: 478 NVVVTN--TLINMYARCGSLEEAERLFAAAKEKTVVS-WTAMVAAFSQY 523



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 23/208 (11%)

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           DR+  PD+    ++L +C++     +G+ +H  I    F  DT  GN+L++MY KC S+ 
Sbjct: 2   DRQ--PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLV 59

Query: 452 DADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           DA   F  +    R +VSW+AMI   AQ+G   EAL ++ +M   G+  +H+T VSVL A
Sbjct: 60  DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119

Query: 510 CNHAGLVAEAKHHFESMEKKF--GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
           C+    +A+ +   E   + F  G+   Q     ++ +  R G   +A  +  ++  +  
Sbjct: 120 CSS---LAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDE 173

Query: 568 ASVWGALL----------GAARIYKNVE 585
            S W A++          GA RI+K ++
Sbjct: 174 TS-WNAVILAHSQSGDWSGALRIFKEMK 200


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/725 (40%), Positives = 433/725 (59%), Gaps = 11/725 (1%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           +P+R+VVSWNSL S Y    F  E +  FKE  +S +R ++F+ S+ ++ C  + D  LG
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R IH      G    +   N+L+DMY K G ++ A  VF+  +  D VSWN++IAG V  
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAG--MELKELGRQLHCSLIKMEIKSDPI 233
             ND  L+L  +M    +N N +   SALKAC        E G+ LH   +K+ +  D +
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----NGGDMEAASLFPW 288
           VG  L+D YAK G +++A  IF LMP+ N++ +N +I+G LQ     +    EA  LF  
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M   G+   + T S++LK+ ++ +A    KQ+HA   K   +SD++I N+L++ Y   G 
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +ED +K F  +  +D+V+ TS+I  + Q G  E  L L+ E+      PD F  S +L+A
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           CANL+A + G+Q+H + IK G  + T   NS + MYAKCG ID A+  F E  +  IVSW
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           S MI   AQHG  KEA+ +F  M   G+ PNHIT + VL AC+H GLV E   +FE M+K
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
             GI P  +H AC++D+LGRAG+  EA   +    F+ +  +W +LL A R++K  + G+
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
             AE +  +EPE ++++VLL NIY  AG+     ++R  MKD  +KKEPG+SWIEV + V
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 600

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE--QLLYHHSEK 706
           ++F  GDRSH  S+ IY +L+E+ + + K  Y+   E  + D  E + +   ++ +HSEK
Sbjct: 601 HSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYID--EKLVSDASEPKHKDNSMVSYHSEK 658

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCS 766
           LAV FG+I+ P  A +RV KNLR C  CH + +  S++ +REII+RD  RFH FR+GSCS
Sbjct: 659 LAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCS 718

Query: 767 CGGYW 771
           CG YW
Sbjct: 719 CGDYW 723



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/490 (32%), Positives = 268/490 (54%), Gaps = 17/490 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C    DL LG  +H ++  +G      + NSL+ MY KCG    +R +F++  E   
Sbjct: 48  LSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDS 107

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL--GRKIH 119
           VSWNSL + YV     +E +    +M+  G+  N ++L S + AC  +  S +  G+ +H
Sbjct: 108 VSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLH 167

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG-----CVL 174
           G ++KLG D D+    AL+D YAK+G+LEDA  +FK +  P++V +NA+IAG      + 
Sbjct: 168 GCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMA 227

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
            E  + A+ LF +M+S  + P+ FT++S LKAC+ +E  E G+Q+H  + K  ++SD  +
Sbjct: 228 DEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 287

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LV++Y+  GS+++    FH  P+ ++++W  +I GH+QNG      +LF  +   G 
Sbjct: 288 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR 347

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T+S +L + A+  A+   +Q+HA ++KT   +   I NS I  Y KCG ++ A  
Sbjct: 348 KPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANM 407

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            FKE+   D+V+ + MI++ AQ G  +EA+ L+  M+   I P+      +L AC++   
Sbjct: 408 TFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGL 467

Query: 415 YEQGKQVHVHIIK--FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI----VSW 468
            E+G + +  I+K   G   +      +V++  + G + +A+   S I D G     V W
Sbjct: 468 VEEGLR-YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAE---SFIMDSGFEGDPVMW 523

Query: 469 SAMIGGLAQH 478
            +++     H
Sbjct: 524 RSLLSACRVH 533



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC++ +    G Q+H  +      SDEF+ N+LV +Y+  G+  D  + F + P+  
Sbjct: 256 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 315

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL   +V     E  +  F E++ SG +P+EF++S M++ACA       G +IH 
Sbjct: 316 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHA 375

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y+IK G  +     N+ + MYAK G+++ A   FK+ ++PDIVSW+ +I+    H     
Sbjct: 376 YAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKE 435

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV--GVGL 238
           A+ LF+ MK S I PN  T+   L AC+   L E G + +  ++K +    P V     +
Sbjct: 436 AVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR-YFEIMKKDHGITPNVKHSACI 494

Query: 239 VDMYAKCGSMDEAR-MIFHLMPEKNLIAWNIVIS 271
           VD+  + G + EA   I     E + + W  ++S
Sbjct: 495 VDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLS 528


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/771 (35%), Positives = 454/771 (58%), Gaps = 2/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC    D  +   +H  V+  GF SD ++ N+L+ MY +  +   +R++F+ +P R 
Sbjct: 180 VINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 239

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL S Y    +  EA+  +      G+ P+ +++SS++ AC G G    G  IHG
Sbjct: 240 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 299

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K+G   D+   N L+ MY K   L D   +F  +   D VSWN +I G       + 
Sbjct: 300 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 359

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++KLF +M  ++  P++ T TS L+AC  +   E G+ +H  +I    + D      L++
Sbjct: 360 SIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 418

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG++  ++ +F  M  K+ ++WN +I+ ++QNG   EA  LF  M +  V  D  T
Sbjct: 419 MYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVT 477

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L        + + K++H    K  F S+  + N+L+D Y KCG + D++K+F+   
Sbjct: 478 YVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK 537

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D++   ++I +          L++   M+   + PD     S+L  C+ L+A  QGK+
Sbjct: 538 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 597

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I K G  SD   GN L+ MY+KCGS+ ++ + F  +  + +V+W+A+I     +G 
Sbjct: 598 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 657

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK+A++ FG+M   G++P+H+  V+++ AC+H+GLV E  ++F  M+K + I+P  EHYA
Sbjct: 658 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 717

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R+    +A + + +MP + ++S+WGALL A R+  + E+ Q  +E +  + P+
Sbjct: 718 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPD 777

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +VL+SN+YA+ G WD V  +R+ +K   LKK+PG SW+E+++KVY F  G +   +
Sbjct: 778 DTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQ 837

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +E+   L  ++ L+ K GY+  ++  LHD++E EK  +L  HSE+LA+AFGL+ T PG 
Sbjct: 838 FEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGT 897

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ++V KNLR+C DCHT  ++ISKI  RE++VRD NRFH F++G+CSCG YW
Sbjct: 898 PLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/567 (28%), Positives = 290/567 (51%), Gaps = 5/567 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLFSCYVHC 74
           ++H +++  G       +  L+  YA   +   S  +F  A P  +V  WNS+     H 
Sbjct: 93  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               EA+  + E     ++P+ ++  S+INACAG  D  + + IH   + +G+ SD++  
Sbjct: 153 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIG 212

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           NAL+DMY +  +L+ A  VF+++   D+VSWN++I+G   + + + AL+++ + ++  + 
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+ +T +S L+AC G+   E G  +H  + K+ IK D IV  GL+ MY K   + + R I
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 332

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  M  ++ ++WN +I G+ Q G   E+  LF  M  +    D  T++++L++      +
Sbjct: 333 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDL 391

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              K VH   + + +E D    N LI+ Y KCG++  + ++F      D V+  SMI  Y
Sbjct: 392 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 451

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            Q G  +EA+KL+ +M   ++ PDS     LL+    L     GK++H  + K GF S+ 
Sbjct: 452 IQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNI 510

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
              N+LV+MYAKCG + D+ + F  +  R I++W+ +I            L+M  +M  +
Sbjct: 511 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 570

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           GV P+  T++S+L  C+      + K        K G++        +I++  + G  + 
Sbjct: 571 GVTPDMATMLSILPVCSLLAAKRQGK-EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 629

Query: 555 AMELVDTMPFQANASVWGALLGAARIY 581
           + ++   M  + +   W AL+ A  +Y
Sbjct: 630 SFQVFKLMKTK-DVVTWTALISACGMY 655



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 247/481 (51%), Gaps = 7/481 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
            SS+  A A +  +    K+H   I LG    +  +  L+  YA   +   + +VF+ + 
Sbjct: 75  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR-LA 133

Query: 159 HP--DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
            P  ++  WN++I     +     AL L+ + +   + P+ +T+ S + ACAG+   E+ 
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 193

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H  ++ M   SD  +G  L+DMY +   +D+AR +F  MP +++++WN +ISG+  N
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA  ++      GV  D  T+S+VL++     ++     +H L  K   + D  + 
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N L+  Y K   + D  +IF +    D V+  +MI  Y+Q GL EE++KL++EM + +  
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 372

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD    +S+L AC +L   E GK VH ++I  G+  DT A N L+NMYAKCG++  +   
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           FS +  +  VSW++MI    Q+G   EA+++F +M++  V P+ +T V +L      G +
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDL 491

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
              K     +  K G          ++D+  + G+  +++++ + M  + +   W  ++ 
Sbjct: 492 XLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIA 549

Query: 577 A 577
           +
Sbjct: 550 S 550


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 278/771 (36%), Positives = 455/771 (59%), Gaps = 2/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC    D  +   +H  V+  GF SD ++ N+L+ MY +  +   +R++F+ +P R 
Sbjct: 121 VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 180

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL S Y    +  EA+  +      G+ P+ +++SS++ AC G G    G  IHG
Sbjct: 181 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 240

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K+G   D+   N L+ MY K   L D   +F  +   D VSWN +I G       + 
Sbjct: 241 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 300

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++KLF +M  ++  P++ T TS L+AC  +   E G+ +H  +I    + D      L++
Sbjct: 301 SIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 359

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG++  ++ +F  M  K+ ++WN +I+ ++QNG   EA  LF  M +  V  D  T
Sbjct: 360 MYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVT 418

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L        + + K++H    K  F S+  + N+L+D Y KCG + D++K+F+   
Sbjct: 419 YVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK 478

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D++   ++I +          L++   M+   + PD     S+L  C+ L+A  QGK+
Sbjct: 479 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 538

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I K G  SD   GN L+ MY+KCGS+ ++ + F  +  + +V+W+A+I     +G 
Sbjct: 539 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 598

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK+A++ FG+M   G++P+H+  V+++ AC+H+GLV E  ++F  M+K + I+P  EHYA
Sbjct: 599 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 658

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R+    +A + + +MP + ++S+WGALL A R+  + E+ +  +E +  + P+
Sbjct: 659 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 718

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +VL+SNIYA+ G WD V  +R+ +K   LKK+PG SW+E+++KVY F  G +   +
Sbjct: 719 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQ 778

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +E+   L  ++ L+ K GY+  ++  LHD++E EK  +L  HSE+LA+AFGL+ T PG 
Sbjct: 779 FEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGT 838

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ++V KNLR+C DCHT  ++ISKIV RE++VRD NRFH F++G+CSCG YW
Sbjct: 839 PLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/567 (28%), Positives = 290/567 (51%), Gaps = 5/567 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLFSCYVHC 74
           ++H +++  G       +  L+  YA   +   S  +F  A P  +V  WNS+     H 
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               EA+  + E     ++P+ ++  S+INACAG  D  + + IH   + +G+ SD++  
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           NAL+DMY +  +L+ A  VF+++   D+VSWN++I+G   + + + AL+++ + ++  + 
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+ +T +S L+AC G+   E G  +H  + K+ IK D IV  GL+ MY K   + + R I
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 273

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  M  ++ ++WN +I G+ Q G   E+  LF  M  +    D  T++++L++      +
Sbjct: 274 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDL 332

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              K VH   + + +E D    N LI+ Y KCG++  + ++F      D V+  SMI  Y
Sbjct: 333 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 392

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            Q G  +EA+KL+ +M   ++ PDS     LL+    L     GK++H  + K GF S+ 
Sbjct: 393 IQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNI 451

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
              N+LV+MYAKCG + D+ + F  +  R I++W+ +I            L+M  +M  +
Sbjct: 452 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 511

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           GV P+  T++S+L  C+      + K        K G++        +I++  + G  + 
Sbjct: 512 GVTPDMATMLSILPVCSLLAAKRQGK-EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 570

Query: 555 AMELVDTMPFQANASVWGALLGAARIY 581
           + ++   M  + +   W AL+ A  +Y
Sbjct: 571 SFQVFKLMKTK-DVVTWTALISACGMY 596



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 247/481 (51%), Gaps = 7/481 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
            SS+  A A +  +    K+H   I LG    +  +  L+  YA   +   + +VF+ + 
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR-LA 74

Query: 159 HP--DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
            P  ++  WN++I     +     AL L+ + +   + P+ +T+ S + ACAG+   E+ 
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H  ++ M   SD  +G  L+DMY +   +D+AR +F  MP +++++WN +ISG+  N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA  ++      GV  D  T+S+VL++     ++     +H L  K   + D  + 
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N L+  Y K   + D  +IF +    D V+  +MI  Y+Q GL EE++KL++EM + +  
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 313

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD    +S+L AC +L   E GK VH ++I  G+  DT A N L+NMYAKCG++  +   
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           FS +  +  VSW++MI    Q+G   EA+++F +M++  V P+ +T V +L      G +
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDL 432

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
              K     +  K G          ++D+  + G+  +++++ + M  + +   W  ++ 
Sbjct: 433 HLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIA 490

Query: 577 A 577
           +
Sbjct: 491 S 491


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 294/774 (37%), Positives = 461/774 (59%), Gaps = 9/774 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V ++CT   ++ +  Q+H +++  G   D  +   LV +YA  G+   S   F  I  ++
Sbjct: 57  VFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113

Query: 61  VVSWNSLFSCYVHCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + SWNS+ S YV      +++ C  + + LSG+RP+ ++   ++ AC    D   G K+H
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMH 170

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + +K+G++ D++ A +L+ +Y++ G +E A  VF D+   D+ SWNA+I+G   + +  
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL++  +MK+ E+  +  T +S L  CA       G  +H  +IK  ++SD  V   L+
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY+K G + +A+ +F  M  ++L++WN +I+ + QN   + A   F  M   G+  D  
Sbjct: 291 NMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLL 350

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAF-ESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           T+ ++           + + VH   V+  + E D  I N+L++ Y K G ++ A  +F++
Sbjct: 351 TVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQ 410

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQ 417
             + D+++  ++IT YAQ GL  EA+  Y  M++ R I P+     S+L A +++ A +Q
Sbjct: 411 LPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQ 470

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G ++H  +IK     D F    L++MY KCG ++DA   F EIP    V W+A+I  L  
Sbjct: 471 GMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGI 530

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG G++ALQ+F  M  DGV  +HIT VS+L AC+H+GLV EA+  F++M+K++ I+P  +
Sbjct: 531 HGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLK 590

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CM+D+ GRAG  ++A  LV  MP QA+AS+WG LL A RI+ N E+G  A++ L  +
Sbjct: 591 HYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEV 650

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           + E    +VLLSNIYA+ G W+   KVR   +D  L+K PG S + V   V  F  G++S
Sbjct: 651 DSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQS 710

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H +  EIY +L  ++  +   GYVP     L DVEE EKE++L  HSE+LA+ FG+I+TP
Sbjct: 711 HPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTP 770

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P + IR+ KNLR+C DCH + ++ISKI  REIIVRD NRFHHF++G CSCG YW
Sbjct: 771 PKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/749 (39%), Positives = 440/749 (58%), Gaps = 10/749 (1%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D ++A+SLV MY +CG+   +  +F  I  +S+V W  L S YV       A+  F  ++
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             GI  +     S+++AC+       GR IH  +++ G       A+ALV MY + G+L 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 149 DAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           DA A+F  +E H D+V WNA+I     +     AL++F +M    I P++ T+ S  KAC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 208 AGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           +          +  H  L +  + SD +V   LV+ YA+CG +D AR  F  MPE+N ++
Sbjct: 241 SSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVS 300

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W  +I+   Q G  + A   F  M  EGV     T ST+  ++   + + V + V A++ 
Sbjct: 301 WTSMIAAFTQIG-HLLAVETFHAMLLEGV---VPTRSTLFAALEGCEDLRVARLVEAIAQ 356

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIF--KESSAVDLVACTSMITAYAQFGLGEEA 383
           +    +D  IV  L+ AY +C   EDA+++F  +E    D    T+MI  YAQ       
Sbjct: 357 EIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRST 416

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVN 442
            KL+    +R I+PD  +  + L+ACA+L+A  +G+Q+H  +     +  D   GN++V+
Sbjct: 417 FKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVS 476

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY +CGS+ DA  AF  +P R  +SW+AM+   AQHGR ++   +F  ML++G     I 
Sbjct: 477 MYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIA 536

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            +++L AC HAGLV     HF +M    G+ P  EHY CM+D+LGR G+  +A  +V  M
Sbjct: 537 FLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           P   +A+ W AL+GA RIY + E G+ AAE +  +  + ++ +V L NIY++AG WD+ A
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAA 656

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            VR+ M D  L+K PG+S IE++ KV+ F V DRSH +S+ IYA+L+ V   + +AGY  
Sbjct: 657 AVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRA 716

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
           +    LHDVEE +KEQLL  HSEKLA+AFG+++TP G+T+RV KNLR+CVDCH + +FIS
Sbjct: 717 VTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFIS 776

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K+  REI+VRDV RFHHF++G+CSCG YW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 230/510 (45%), Gaps = 25/510 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VL AC+S++ L  G  +H   V  G    E VA++LV MY +CG+  D+  LF  +    
Sbjct: 134 VLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHL 193

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VV WN++ +         EA+  F  M+  GI P+  +  S+  AC+ S  SL   ++ 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS-SSPSLRASQVK 252

Query: 120 GYSIKL---GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           G+   L   G  SD+  A ALV+ YA+ G ++ A   F ++   + VSW ++IA      
Sbjct: 253 GFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIG 312

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK--SDPIV 234
           H   A++ F  M    + P   T  +AL+ C  + +  L        I  EI   +D  +
Sbjct: 313 HL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARL-----VEAIAQEIGVVTDVAI 366

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI--VISGHLQNGGDMEAASLFPWMYRE 292
              LV  YA+C   ++A  +F    E    A  +  +I+ + Q         L+      
Sbjct: 367 VTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER 426

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHA-LSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           G+  D+    T L + AS  A+   +Q+HA ++     + D  + N+++  YG+CG + D
Sbjct: 427 GISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRD 486

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A   F    A D ++  +M++A AQ G  E+   L+  M     + +     +LL+ACA+
Sbjct: 487 ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAH 546

Query: 412 LSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD---RAFSEIPDRGIVS 467
               + G +         G +  T     +V++  + G + DA    +A    PD    +
Sbjct: 547 AGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPD--AAT 604

Query: 468 WSAMIGGLAQHG---RGKEALQMFGQMLED 494
           W A++G    +G   RG+ A +   ++  D
Sbjct: 605 WMALMGACRIYGDTERGRFAAERVLELRAD 634


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 282/697 (40%), Positives = 417/697 (59%)

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
           + L EA+      +  G+  + F    ++  C    D +  +++H   IK   + +    
Sbjct: 7   NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           N L+ +Y + G L++A  VF  +      SWNA+IAG V H+H + A++LF++M    + 
Sbjct: 67  NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           PN  TY   LKACA +   + G+++H  +    ++SD  VG  L+ MY KCGS++EAR I
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  +   ++I+W ++I  + Q+G   EA  L   M +EG   +  T  ++L + AS  A+
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              K+VH  ++    E D  +  +L+  Y K G ++DA  +F      D+V+   MI A+
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           A+ G G EA  L+L+MQ     PD+ +  S+LNACA+  A E  K++H H +  G   D 
Sbjct: 307 AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV 366

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
             G +LV+MY+K GSIDDA   F  +  R +VSW+AMI GLAQHG G++AL++F +M   
Sbjct: 367 RVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAH 426

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           GV P+ +T V+VL AC+HAGLV E +  + +M + +GI+P   H  CM+D+LGRAG+  E
Sbjct: 427 GVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLME 486

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           A   +D M    + + WGALLG+ R Y NVE+G+  A+    ++P+ ++T+VLLSNIYA 
Sbjct: 487 AKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAE 546

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
           AG WD V+ VR  M++  ++KEPG SWIEV +K++ F V D SH   KEI    D+V + 
Sbjct: 547 AGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEK 606

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
           +   GY+P     L +    +KE  +  HSEKLA+ +GL+ TPPG  IRV KNLR+C DC
Sbjct: 607 IKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDC 666

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + + ISK+  REIIVRD NRFHHF++G CSCG YW
Sbjct: 667 HGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 256/483 (53%), Gaps = 6/483 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C  +KDL    QVH  ++ +  + +  V N+L+ +Y +CG   ++R +FDA+ ++S
Sbjct: 34  VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKS 93

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SWN++ + YV     E+A+  F+EM   G++PN  +   ++ ACA       G+++H 
Sbjct: 94  GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA 153

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G +SD+    AL+ MY K G++ +A  +F ++ + DI+SW  +I       +   
Sbjct: 154 CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKE 213

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +L  QM+     PN  TY S L ACA     +  +++H   +   ++ D  VG  LV 
Sbjct: 214 AYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQ 273

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+D+AR++F  M  +++++WN++I    ++G   EA  LF  M  EG   D   
Sbjct: 274 MYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIM 333

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + AS  A+   K++H  ++ +  E D  +  +L+  Y K G ++DA  +F    
Sbjct: 334 FLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMK 393

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++V+  +MI+  AQ GLG++AL+++  M    + PD     ++L+AC++    ++G+ 
Sbjct: 394 VRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRS 453

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLA 476
            ++ + + +G   D    N +V++  + G + +A      +   PD    +W A++G   
Sbjct: 454 QYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA--TWGALLGSCR 511

Query: 477 QHG 479
            +G
Sbjct: 512 TYG 514


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/772 (37%), Positives = 455/772 (58%), Gaps = 1/772 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            V+ +C   KD  LG Q+ G V+ +G +S   V NSL+ M+   GN   +  +F+ I ER 
Sbjct: 267  VISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERD 326

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +SWNS+ + Y     +EE+   F  M       N  ++S++++          GR IHG
Sbjct: 327  TISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHG 386

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +K+G+DS +   N L+ MYA  G  E+A  VFK +   D++SWN+++A  V    +  
Sbjct: 387  LVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLD 446

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            AL +   M  +  + N  T+TSAL AC   E  + GR LH  ++   +  + I+G  LV 
Sbjct: 447  ALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVS 506

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY K G M  +R +   MP ++++AWN +I G+ +N    +A + F  +  EGV  +  T
Sbjct: 507  MYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYIT 566

Query: 301  LSTVLKS-VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + +VL + +     +   K +HA  V   FESD+++ NSLI  Y KCG +  +  +F   
Sbjct: 567  VVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 626

Query: 360  SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                ++   +++ A A  G GEE LKL  +M+   ++ D F  S  L+A A L+  E+G+
Sbjct: 627  DNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQ 686

Query: 420  QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            Q+H   +K GF  D F  N+  +MY+KCG I +  +      +R + SW+ +I  L +HG
Sbjct: 687  QLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 746

Query: 480  RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              +E  + F +MLE G+ P H+T VS+L AC+H GLV +   +++ + K FG++P  EH 
Sbjct: 747  YFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHC 806

Query: 540  ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             C+ID+LGR+G+  EA   +  MP + N  VW +LL + +I+++++ G+ AAE L  +EP
Sbjct: 807  ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEP 866

Query: 600  EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
            E  S  VL SN++A+ G W++V  VR+ M    +KK+   SW+++KDKV +F +GDR+H 
Sbjct: 867  EDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 926

Query: 660  RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            ++ EIYAKL+++  L+ ++GYV      L D +E +KE  L++HSE+LA+A+ L++TP G
Sbjct: 927  QTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEG 986

Query: 720  ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +T+R+ KNLRIC DCH+ ++F+S+++ R I++RD  RFHHF +G CSC  YW
Sbjct: 987  STVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 297/581 (51%), Gaps = 8/581 (1%)

Query: 1   VLKACTSKKDLFL-GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++ AC     +F  G+QVHG V  +G  SD +V+ +++ +Y   G    SR++F+ +P+R
Sbjct: 165 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 224

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSW SL   Y      EE +  +K M   G+  NE S+S +I++C    D  LGR+I 
Sbjct: 225 NVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQII 284

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  IK G +S +   N+L+ M+  +GN++ A  +F  I   D +SWN+++A    + H +
Sbjct: 285 GQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIE 344

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            + ++F  M+      N  T ++ L     ++ ++ GR +H  ++KM   S   V   L+
Sbjct: 345 ESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 404

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYA  G  +EA ++F  MP K+LI+WN +++  + +G  ++A  +   M R G   +  
Sbjct: 405 RMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYV 464

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ++ L +  S +     + +H L V +    +  I N+L+  YGK G +  + ++  + 
Sbjct: 465 TFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQM 524

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYEQG 418
              D+VA  ++I  YA+    ++AL  +  ++   ++ +     S+L+AC       E+G
Sbjct: 525 PRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG 584

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K +H +I+  GF SD    NSL+ MYAKCG +  +   F+ + +R I++W+A++   A H
Sbjct: 585 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHH 644

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+E L++  +M   G+  +  +    L A     ++ E +     +  K G +     
Sbjct: 645 GHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLGFELDCFI 703

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASV--WGALLGA 577
           +    D+  + G   E  E+V  +P   N S+  W  L+ A
Sbjct: 704 FNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISA 741



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 288/550 (52%), Gaps = 10/550 (1%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N+L+ MY K G    +R LFD +P R+ VSWN++ S  V      E + FF++M   GI
Sbjct: 96  TNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGI 155

Query: 93  RPNEFSLSSMINACAGSGDSLL-GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +P+ F ++S++ AC  SG     G ++HG+  K G  SD++ + A++ +Y   G +  + 
Sbjct: 156 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 215

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF+++   ++VSW +++ G       +  + +++ M+   +  N  + +  + +C  ++
Sbjct: 216 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLK 275

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
            + LGRQ+   +IK  ++S   V   L+ M+   G++D A  IF+ + E++ I+WN +++
Sbjct: 276 DESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            + QNG   E++ +F  M R     + TT+ST+L  +         + +H L VK  F+S
Sbjct: 336 AYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDS 395

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM- 390
              + N+L+  Y   G  E+A  +FK+    DL++  S++ ++   G   +AL +   M 
Sbjct: 396 VVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMI 455

Query: 391 -QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
              + +N  +F  +S L AC +   +++G+ +H  ++  G   +   GN+LV+MY K G 
Sbjct: 456 RTGKSVNYVTF--TSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGG 513

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +  + R   ++P R +V+W+A+IGG A++    +AL  F  +  +GV  N+IT+VSVL A
Sbjct: 514 MSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSA 573

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C   G + E      +     G +  +     +I +  + G    + +L + +    N S
Sbjct: 574 CLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD---NRS 630

Query: 570 V--WGALLGA 577
           +  W A+L A
Sbjct: 631 IITWNAILAA 640



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 230/467 (49%), Gaps = 9/467 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           GR +H   +K      +   N L++MY K G ++ A  +F  +   + VSWN +++G V 
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDP 232
                  ++ FQ+M    I P+ F   S + AC  +G   +E G Q+H  + K  + SD 
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFRE-GVQVHGFVAKSGLLSDV 195

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   ++ +Y   G +  +R +F  MP++N+++W  ++ G+   G   E   ++  M  E
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           GV  ++ ++S V+ S    +   + +Q+    +K+  ES   + NSLI  +G  G+V+ A
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             IF + S  D ++  S++ AYAQ G  EE+ +++  M+      +S   S+LL+   ++
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              + G+ +H  ++K GF S     N+L+ MYA  G  ++AD  F ++P + ++SW++++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKF 530
                 GR  +AL +   M+  G   N++T  S L AC       + +  H    +   F
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLF 495

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             Q +      ++ + G+ G    +  ++  MP + +   W AL+G 
Sbjct: 496 DNQIIGN---ALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALIGG 538



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 219/498 (43%), Gaps = 74/498 (14%)

Query: 158 EHPDIVSWNAVIAGCV-LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           E   ++ W    +GC  L +H +  L  F Q   S+I                   +  G
Sbjct: 39  EGKKVIRW----SGCFSLSDHWNPELSCFDQTGFSQITR-----------------ETTG 77

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           R LH   +K  ++   +    L++MY K G +  AR +F  MP +N ++WN ++SG ++ 
Sbjct: 78  RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRV 137

Query: 277 GGDMEAASLFPWMYREGV---GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           G  +E    F  M   G+    F   +L T      S    GV  QVH    K+   SD 
Sbjct: 138 GLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGV--QVHGFVAKSGLLSDV 195

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           Y+  +++  YG  G V  + K+F+E    ++V+ TS++  Y+  G  EE + +Y  M+  
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            +  +    S ++++C  L     G+Q+   +IK G  S     NSL++M+   G++D A
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM--LEDGVLPNHI-TLVSVLCAC 510
           +  F++I +R  +SW++++   AQ+G  +E+ ++F  M    D V    + TL+SVL   
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375

Query: 511 NHA-------GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR----AGKFQEAMELV 559
           +H        GLV   K  F+S+              C+ + L R    AG+ +EA  + 
Sbjct: 376 DHQKWGRGIHGLV--VKMGFDSV-------------VCVCNTLLRMYAGAGRSEEADLVF 420

Query: 560 DTMPFQANASVWGALLGA-----------------ARIYKNVEVGQHAAEMLFAIEPEKS 602
             MP +   S W +L+ +                  R  K+V      + +     PE  
Sbjct: 421 KQMPTKDLIS-WNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFF 479

Query: 603 STHVLLSNIYASAGMWDN 620
               +L  +   +G++DN
Sbjct: 480 DKGRILHGLVVVSGLFDN 497


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 289/764 (37%), Positives = 451/764 (59%), Gaps = 1/764 (0%)

Query: 9    KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
            KD  LG Q+ G VV +G +S   V NSL+ M    GN   +  +FD + ER  +SWNS+ 
Sbjct: 264  KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 323

Query: 69   SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
            + Y     +EE+   F  M       N  ++S++++          GR IHG  +K+G+D
Sbjct: 324  AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 383

Query: 129  SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            S +   N L+ MYA  G   +A  VFK +   D++SWN+++A  V    +  AL L   M
Sbjct: 384  SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443

Query: 189  KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
             SS  + N  T+TSAL AC   +  E GR LH  ++   +  + I+G  LV MY K G M
Sbjct: 444  ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 503

Query: 249  DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS- 307
             E+R +   MP ++++AWN +I G+ ++    +A + F  M  EGV  +  T+ +VL + 
Sbjct: 504  SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563

Query: 308  VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            +     +   K +HA  V   FESD+++ NSLI  Y KCG +  +  +F      +++  
Sbjct: 564  LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 623

Query: 368  TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
             +M+ A A  G GEE LKL  +M+   ++ D F  S  L+A A L+  E+G+Q+H   +K
Sbjct: 624  NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 683

Query: 428  FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
             GF  D+F  N+  +MY+KCG I +  +      +R + SW+ +I  L +HG  +E    
Sbjct: 684  LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCAT 743

Query: 488  FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
            F +MLE G+ P H+T VS+L AC+H GLV +   +++ + + FG++P  EH  C+ID+LG
Sbjct: 744  FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 803

Query: 548  RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
            R+G+  EA   +  MP + N  VW +LL + +I+ N++ G+ AAE L  +EPE  S +VL
Sbjct: 804  RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 863

Query: 608  LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
             SN++A+ G W++V  VR+ M    +KK+   SW+++KDKV +F +GDR+H ++ EIYAK
Sbjct: 864  SSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAK 923

Query: 668  LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
            L+++  L+ ++GYV      L D +E +KE  L++HSE+LA+A+ L++TP G+T+R+ KN
Sbjct: 924  LEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKN 983

Query: 728  LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            LRIC DCH+ ++F+S+++ R I++RD  RFHHF  G CSC  YW
Sbjct: 984  LRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 266/546 (48%), Gaps = 27/546 (4%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N+L+ MY K G    +R LFD +P R+ VSWN++ S  V      E + FF++M   GI
Sbjct: 110 TNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI 169

Query: 93  RPNEFSLSSMINACAGSGDSLL-GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +P+ F ++S++ AC  SG     G ++HG+  K G  SD++ + A++ +Y   G +  + 
Sbjct: 170 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 229

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF+++   ++VSW +++ G       +  + +++                         
Sbjct: 230 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD------------------------ 265

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
            + LGRQ+   ++K  ++S   V   L+ M    G++D A  IF  M E++ I+WN + +
Sbjct: 266 -ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            + QNG   E+  +F  M R     + TT+ST+L  +         + +H L VK  F+S
Sbjct: 325 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 384

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + N+L+  Y   G   +A  +FK+    DL++  S++ ++   G   +AL L   M 
Sbjct: 385 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 444

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
               + +    +S L AC     +E+G+ +H  ++  G   +   GN+LV+MY K G + 
Sbjct: 445 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 504

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           ++ R   ++P R +V+W+A+IGG A+     +AL  F  M  +GV  N+IT+VSVL AC 
Sbjct: 505 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             G + E      +     G +  +     +I +  + G    + +L + +    N   W
Sbjct: 565 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITW 623

Query: 572 GALLGA 577
            A+L A
Sbjct: 624 NAMLAA 629



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 226/486 (46%), Gaps = 40/486 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC +      G  +HG+VV +G   ++ + N+LV MY K G   +SRR+   +P R V
Sbjct: 459 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 518

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIHG 120
           V+WN+L   Y   +  ++A+  F+ M + G+  N  ++ S+++AC   GD L  G+ +H 
Sbjct: 519 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 578

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +  G++SD    N+L+ MYAK G+L  +  +F  +++ +I++WNA++A    H H + 
Sbjct: 579 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 638

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKL  +M+S  ++ + F+++  L A A + + E G+QLH   +K+  + D  +     D
Sbjct: 639 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 698

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG + E   +      ++L +WNI+IS   ++G   E  + F  M   G+     T
Sbjct: 699 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 758

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L + +           H   V       D I             +E A++      
Sbjct: 759 FVSLLTACS-----------HGGLVDKGLAYYDMIARDF--------GLEPAIE------ 793

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                 C  +I    + G   EA     +M    + P+  V  SLL +C      ++G++
Sbjct: 794 -----HCICVIDLLGRSGRLAEAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRK 845

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR-----AFSEIPDRGIVSWSAMIGGL 475
              ++ K     D+    S  NM+A  G  +D +       F  I  +   SW  +   +
Sbjct: 846 AAENLSKLEPEDDSVYVLS-SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKV 904

Query: 476 AQHGRG 481
           +  G G
Sbjct: 905 SSFGIG 910



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 178/397 (44%), Gaps = 41/397 (10%)

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K+G+ S +F    +     + G L     VF          W   I    + +  +  + 
Sbjct: 3   KVGFKSLIFPGTTVEHRRIRAGQLATQSPVFSG-RRFSFAQW---ICLPPVQDATNLDIA 58

Query: 184 LFQQ--MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +F++   K +  NP +  +       + + ++  GR +H   +K  ++   +    L++M
Sbjct: 59  MFEKSGRKKNHWNPEISCFDQI--GFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINM 116

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV---GFDQ 298
           Y K G +  AR +F +MP +N ++WN ++SG ++ G  +E    F  M   G+    F  
Sbjct: 117 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 176

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            +L T      S    GV  QVH    K+   SD Y+  +++  YG  G V  + K+F+E
Sbjct: 177 ASLVTACGRSGSMFREGV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 234

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               ++V+ TS++  Y+  G  EE + +Y   +D  +                      G
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGEPEEVIDIY---KDESL----------------------G 269

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +Q+   ++K G  S     NSL++M    G++D A+  F ++ +R  +SW+++    AQ+
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 329

Query: 479 GRGKEALQMFGQM--LEDGVLPNHI-TLVSVLCACNH 512
           G  +E+ ++F  M    D V    + TL+SVL   +H
Sbjct: 330 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 366



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 1/158 (0%)

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+ VH   +K          N+L+NMY K G +  A   F  +P R  VSW+ M+ G+ +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            G   E ++ F +M + G+ P+   + S++ AC  +G +            K G+     
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               ++ + G  G    + ++ + MP   N   W +L+
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLM 247


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 276/767 (35%), Positives = 449/767 (58%), Gaps = 1/767 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C  KK L  G +VH +++  G   DE +   LV MY  CG+ +  R++FD I    
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  WN L S Y       E+V  FK+M   G+  N ++ + ++   A  G     +++HG
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +KLG+ S+    N+L+  Y K G +E A  +F ++  PD+VSWN++I GCV++  +  
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L++F QM    +  ++ T  S L ACA +    LGR LH   +K     + +    L+D
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG+++ A  +F  M +  +++W  +I+ +++ G   +A  LF  M  +GV  D  T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++++ + A   ++   + VH+  +K    S+  + N+LI+ Y KCG VE+A  +F +  
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+  +MI  Y+Q  L  EAL+L+L+MQ ++  PD    + +L ACA L+A ++G++
Sbjct: 460 VKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGRE 518

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H HI++ G+ SD     +LV+MYAKCG +  A   F  IP + ++SW+ MI G   HG 
Sbjct: 519 IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 578

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EA+  F +M   G+ P+  +  ++L AC+H+GL+ E    F SM  + G++P  EHYA
Sbjct: 579 GNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYA 638

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R G   +A + +++MP + + ++WG LL   RI+ +V++ +  AE +F +EP+
Sbjct: 639 CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPD 698

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +V+L+N+YA A  W+ V K+R+ M+    K+ PG SWIEV  K   F  G+  H +
Sbjct: 699 NTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQ 758

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           +K+I   L +++  +    Y  M    L + ++ EKE +   HSEK A+AFG++  PPG 
Sbjct: 759 AKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGR 818

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           T+RV KN R+C DCH   +F+SK    EI++RD NRFHHF++G CSC
Sbjct: 819 TVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSC 865



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 282/548 (51%), Gaps = 15/548 (2%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           S  S++  CA       G+++H   I  G   D      LV MY   G+L     +F  I
Sbjct: 96  SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
            +  +  WN +++      +   ++ LF++M+   +  N +T+T  LK  A +   +  +
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           ++H  ++K+   S+  V   L+  Y K G ++ A  +F  + E ++++WN +I+G + NG
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
                  +F  M   GV  D TTL +VL + A+   + + + +H   VK  F  +    N
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y KCG++  A ++F +     +V+ TS+I AY + GL  +A+ L+ EMQ + + P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D +  +S+++ACA  S+ ++G+ VH ++IK G  S+    N+L+NMYAKCGS+++A   F
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           S+IP + IVSW+ MIGG +Q+    EAL++F  M +    P+ IT+  VL AC  AGL A
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPAC--AGLAA 512

Query: 518 EAKH---HFESMEKKFGIQPMQEHYAC-MIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
             K    H   + + +       H AC ++D+  + G    A  L D +P + +   W  
Sbjct: 513 LDKGREIHGHILRRGYF---SDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTV 568

Query: 574 LLGAARI--YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++    +  + N  +       +  IEP++SS   +L N  + +G+ +   K    M+ N
Sbjct: 569 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL-NACSHSGLLNEGWKFFNSMR-N 626

Query: 632 KLKKEPGM 639
           +   EP +
Sbjct: 627 ECGVEPKL 634



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 203/399 (50%), Gaps = 8/399 (2%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  + KS E+  N  +Y S L+ CA  +  E G+++H  +I   I  D  +G  LV 
Sbjct: 80  AIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVF 137

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY  CG + + R IF  +    +  WN+++S + + G   E+ SLF  M + GV  +  T
Sbjct: 138 MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYT 197

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            + VLK  A+   +  CK+VH   +K  F S+  +VNSLI AY K G VE A  +F E S
Sbjct: 198 FTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 257

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+  SMI      G     L+++++M    +  D     S+L ACAN+     G+ 
Sbjct: 258 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRA 317

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   +K  F  +    N+L++MY+KCG+++ A   F ++ D  IVSW+++I    + G 
Sbjct: 318 LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGL 377

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
             +A+ +F +M   GV P+  T+ S++  CAC+ +    +      S   K G+      
Sbjct: 378 YSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS---LDKGRDVHSYVIKNGMGSNLPV 434

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              +I++  + G  +EA  +   +P +   S W  ++G 
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVS-WNTMIGG 472


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 300/774 (38%), Positives = 463/774 (59%), Gaps = 5/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C S ++  LG QV G V+  G +++  VANSL+ M+   G+  ++  +F  + E  
Sbjct: 137 VISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHD 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
            +SWNS+ + Y+     +E++  F  M       N  +LS+M+  C GS D+L  GR IH
Sbjct: 197 TISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGC-GSVDNLKWGRGIH 255

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K G++S++ ++N L+ MY+  G  EDA  VF+ +   D++SWN+++A C   + N 
Sbjct: 256 SLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMA-CYAQDGNC 314

Query: 180 W-ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             ALKL   M       N  T+TSAL AC+  E    G+ LH  +I + +  + IVG  L
Sbjct: 315 LDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNAL 374

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V +YAK G M EA+ +F  MP+++ + WN +I GH  +    EA   F  M  EGV  + 
Sbjct: 375 VTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINY 434

Query: 299 TTLSTVLKS-VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T+S VL + +A    +     +HA  + T F+SD+Y+ NSLI  Y KCG +  +  IF 
Sbjct: 435 ITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFD 494

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             ++ +  A  +M+ A A  G  EEALK  LEM+   +N D F  S  L A A L+  E+
Sbjct: 495 RLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEE 554

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q+H   +K G  S+ F  ++ ++MY KCG IDD  R      +R  +SW+ +    ++
Sbjct: 555 GQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSR 614

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG  ++A + F +M+  GV P+H+T VS+L AC+H G+V E   +++SM K+FGI     
Sbjct: 615 HGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIG 674

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           H  C+ID+LGR+G+F EA   +  MP      VW +LL A + + N+E+G+ A E L  +
Sbjct: 675 HCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKL 734

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +P   S +VL SNI A+ G W++V K+RR M  NK+KK+P  SW+++K+K+  F +GD S
Sbjct: 735 DPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHS 794

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H ++ EIYAKL+E+  ++ +AGY+P +   L D +E +KE  L++HSE+LA+A+GLI++P
Sbjct: 795 HPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSP 854

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G+T+++ KNLR+C DCH+ ++F S I+ R+I++RD  RFH F  G CSC  YW
Sbjct: 855 EGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/443 (32%), Positives = 244/443 (55%), Gaps = 1/443 (0%)

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL-GRKIHGYSIKLGY 127
           S +V      E++ FF EM   G++P+  +++S++ AC  S   L+ G ++HG+ +K+G 
Sbjct: 2   SGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGL 61

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
            SD+F   +LV +Y   G   DA+ VF+++ + ++VSW A++   V +      + ++++
Sbjct: 62  LSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRR 121

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+S  ++ N  T +S +  C  +E + LG Q+   +IK  ++++  V   L+ M+   GS
Sbjct: 122 MRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           ++EA  +F  M E + I+WN +I+ +++NG   E+   F WM+R     + TTLST+L  
Sbjct: 182 VEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
             S   +   + +H+L +K  + S+    N+LI  Y   G  EDA  +F+     D+++ 
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            SM+  YAQ G   +ALKL   M       +    +S L AC++     +GK +H  +I 
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIH 361

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G   +   GN+LV +YAK G + +A + F  +P R  V+W+A+IGG A      EAL+ 
Sbjct: 362 VGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKA 421

Query: 488 FGQMLEDGVLPNHITLVSVLCAC 510
           F  M E+GV  N+IT+ +VL AC
Sbjct: 422 FKLMREEGVPINYITISNVLGAC 444



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/578 (27%), Positives = 289/578 (50%), Gaps = 8/578 (1%)

Query: 1   VLKACTSKKDLFL-GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++ AC   + + + G+QVHG +V  G  SD FV  SLV +Y   G   D+ ++F  +  +
Sbjct: 35  LVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYK 94

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           +VVSW +L   YV  D+ E ++    ++ M   G+  N+ ++SS+I+ C    + LLG +
Sbjct: 95  NVVSWTALMVAYV--DYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQ 152

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           + G+ IK G ++++  AN+L+ M+   G++E+A  VF  ++  D +SWN++IA  + +  
Sbjct: 153 VLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGL 212

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              +L+ F  M       N  T ++ L  C  ++  + GR +H  ++K    S+      
Sbjct: 213 CKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNT 272

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MY+  G  ++A ++F  M EK++I+WN +++ + Q+G  ++A  L   M+    G +
Sbjct: 273 LITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGAN 332

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T ++ L + +  +     K +HAL +      +  + N+L+  Y K G + +A K+F+
Sbjct: 333 YVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQ 392

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYE 416
                D V   ++I  +A     +EALK +  M++  +  +    S++L AC A     E
Sbjct: 393 TMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLE 452

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G  +H  II  GF SD +  NSL+ MYAKCG ++ ++  F  +  +   +W+AM+   A
Sbjct: 453 HGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANA 512

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG  +EAL+   +M   GV  +  +  S   A      + E       +  K G     
Sbjct: 513 HHGHMEEALKFLLEMRRAGVNVDEFSF-SECLAAAAKLAILEEGQQLHGLAVKLGCDSNP 571

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
              +  +D+ G+ G+  + + ++   P   +   W  L
Sbjct: 572 FVASATMDMYGKCGEIDDVLRIIPR-PINRSRLSWNIL 608



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 7/253 (2%)

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFG 429
           ++ + + G   E+++ + EM+D  + P     +SL+ AC        +G QVH  I+K G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
            +SD F G SLV++Y   G   DA + F E+  + +VSW+A++     +G     + ++ 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAE-AKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           +M  +G+  N  T+ SV+  C    L  E   +       K+G++        +I + G 
Sbjct: 121 RMRSEGMSCNDNTMSSVISTC--VSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGY 178

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
            G  +EA  +   M      S W +++ A       +        +F +  E +ST   L
Sbjct: 179 FGSVEEACYVFSGMDEHDTIS-WNSMIAAYIRNGLCKESLRCFSWMFRVHKEINST--TL 235

Query: 609 SNIYASAGMWDNV 621
           S + A  G  DN+
Sbjct: 236 STMLAGCGSVDNL 248


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/779 (37%), Positives = 457/779 (58%), Gaps = 13/779 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D+ LG  VHG  + T   SD FV N+L+ MY K G    + ++FD +P+R+
Sbjct: 202 VIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRN 261

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +VSWNS+    +     EE+   FK ++    G+ P+  ++ ++I  CA  G+  LG   
Sbjct: 262 LVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF 321

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG ++KLG   ++   ++L+DMY+K G L +A  +F D    +++SWN++I G       
Sbjct: 322 HGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDF 380

Query: 179 DWALKLFQQMK-SSEINPNMFTYTSALKACAG----MELKEL-GRQLHCSLIKMEIKSDP 232
             A +L ++M+   ++  N  T  + L  C      ++LKE+ G  L    I+    SD 
Sbjct: 381 RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQ----SDE 436

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           +V    V  YAKCGS+  A  +F  M  K + +WN +I GH+QNG   +A  L+  M   
Sbjct: 437 LVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGS 496

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  T++++L + A  +++   K++H   ++  FE D++I  SL+  Y +CG +  A
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLA 556

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
              F      +LV   +MI  ++Q     +AL ++ +M   +I PD       L AC+ +
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           SA   GK++H   +K      +F   SL++MYAKCG ++ +   F  +  +G V+W+ +I
Sbjct: 617 SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G   HG G++A+++F  M   G  P+ +T +++L ACNHAGLVAE   +   M+  FGI
Sbjct: 677 TGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGI 736

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P  EHYAC++D+LGRAG+  EA+ELV+ +P + ++ +W +LL + R Y+++++G+  A 
Sbjct: 737 KPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVAN 796

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            L  + P+K+  +VL+SN YA  G WD V K+R+ MK+  L+K+ G SWIE+  KV  F 
Sbjct: 797 KLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFL 856

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
           VGD S  +S +I     E+   +NK GY P     LH++EE EK ++L +HSEKLA++FG
Sbjct: 857 VGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFG 916

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           L+ T  G T+RV KNLRICVDCH + + +SKI  REIIVRD  RFHHF+NG CSCG YW
Sbjct: 917 LLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/609 (29%), Positives = 314/609 (51%), Gaps = 22/609 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+ C   K++ +G ++H  +  +  F +D  +   LV MY+ C +  DS  +F+A   +
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN+L S Y+      +AV  F EM+ L+   P+ F+L  +I AC G  D  LG  +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+++K    SD+F  NAL+ MY K G +E AV VF  +   ++VSWN+V+  C+ +   
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 179 DWALKLFQQMKSSE--INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           + +  LF+ + + +  + P++ T  + +  CA      LG   H   +K+ +  +  V  
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VG 295
            L+DMY+KCG + EAR++F    EKN+I+WN +I G+ ++     A  L   M  E  V 
Sbjct: 339 SLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF-ESDDYIVNSLIDAYGKCGHVEDAVK 354
            ++ TL  VL            K++H  +++  F +SD+ + N+ +  Y KCG +  A  
Sbjct: 398 VNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEG 457

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F    +  + +  ++I  + Q G   +AL LYL M+   + PD F  +SLL+ACA L +
Sbjct: 458 VFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKS 517

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              GK++H  +++ GF  D F   SLV++Y +CG I  A   F  + ++ +V W+ MI G
Sbjct: 518 LSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMING 577

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGI 532
            +Q+    +AL MF QML   + P+ I+++  L AC+    +   K  H F         
Sbjct: 578 FSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSH---- 633

Query: 533 QPMQEH---YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
             + EH      +ID+  + G  +++  + D +  +   + W  L+    I+ +   G+ 
Sbjct: 634 --LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLITGYGIHGH---GRK 687

Query: 590 AAEMLFAIE 598
           A E+  +++
Sbjct: 688 AIELFKSMQ 696


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 286/744 (38%), Positives = 447/744 (60%), Gaps = 36/744 (4%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D++  N ++  YA  GN +++R+LF+  P ++ ++W+SL S Y       E +  F +M 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G +P++++L S++ AC+       G+ IH Y+IK+  ++++F A  LVDMY+K   L 
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186

Query: 149 DAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           +A  +F  + +  + V W A++ G   +  +  A++ F++M++  +  N FT+ S L AC
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
             +     GRQ+H  +I      +  V   LVDMYAKCG +  ARMI   M   +++ WN
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G + +G   EA  LF  M+   +  D  T  +VLKS+AS + + + + VH+L++KT
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            F++   + N+L+D Y K G++  A+ +F +    D+++ TS++T Y   G  E+AL+L+
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            +M+   ++ D FV + + +ACA L+  E G+QVH + IK    S   A NSL+ MYAKC
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G ++DA R F  +  R ++SW+A+I G AQ+G                            
Sbjct: 487 GCLEDAIRVFDSMETRNVISWTAIIVGYAQNG---------------------------- 518

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
                  LV   + +FESMEK +GI+P  +HYACMID+LGRAGK  EA  L++ M  + +
Sbjct: 519 -------LVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPD 571

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           A++W +LL A R++ N+E+G+ A + L  +EP  S  +VLLSN+++ AG W++ A +RR 
Sbjct: 572 ATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRA 631

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MK   + KEPG SWIE+K +V+TF   DRSH  + EIY+K+DE+  L+ +AG+VP +   
Sbjct: 632 MKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFA 691

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           L D++E  KE+ L +HSEKLAVAFGL+    GA IR+ KNLR+C DCH++ ++IS I  R
Sbjct: 692 LRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKR 751

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
            II+RD+N FHHF  G CSCG +W
Sbjct: 752 HIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 251/499 (50%), Gaps = 35/499 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VL+AC++   L  G  +H   +    +++ FVA  LV MY+KC   +++  LF ++P+R 
Sbjct: 140 VLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRK 199

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + V W ++ + Y       +A+  FKEM   G+  N F+  S++ AC        GR++H
Sbjct: 200 NYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVH 259

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  I  G+  +++  +ALVDMYAK G+L  A  +   +E  D+V WN++I GCV H + +
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYME 319

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LF +M + +I  + FTY S LK+ A  +  ++G  +H   IK    +   V   LV
Sbjct: 320 EALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALV 379

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G++  A  +F+ + +K++I+W  +++G++ NG   +A  LF  M    V  DQ 
Sbjct: 380 DMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQF 439

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            ++ V  + A    I   +QVHA  +K++  S     NSLI  Y KCG +EDA+++F   
Sbjct: 440 VVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSM 499

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQD--------------------------- 392
              ++++ T++I  YAQ GL E     +  M+                            
Sbjct: 500 ETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEA 559

Query: 393 ------REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
                  ++ PD+ +  SLL+AC      E G++   ++IK    S++     L NM++ 
Sbjct: 560 EHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLE-PSNSLPYVLLSNMFSV 618

Query: 447 CGSIDDADRAFSEIPDRGI 465
            G  +DA      +   GI
Sbjct: 619 AGRWEDAAHIRRAMKTMGI 637



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 175/360 (48%), Gaps = 39/360 (10%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI--------------------------- 270
           L+   +K G +DEAR +F  MP ++   WNI+I                           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITW 102

Query: 271 ----SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
               SG+ +NG ++E    F  M+ +G    Q TL +VL++ ++   +   K +H  ++K
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKI-FKESSAVDLVACTSMITAYAQFGLGEEALK 385
              E++ ++   L+D Y KC  + +A  + F      + V  T+M+T YAQ G   +A++
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
            + EM+++ +  + F   S+L AC ++SAY  G+QVH  II  GF  + +  ++LV+MYA
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYA 282

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG +  A      +    +V W++MI G   HG  +EAL +F +M    +  +  T  S
Sbjct: 283 KCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPS 342

Query: 506 V---LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
           V   L +C +   + E+ H   S+  K G    +     ++D+  + G    A+++ + +
Sbjct: 343 VLKSLASCKNLK-IGESVH---SLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 40/179 (22%)

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR---------------------------- 463
           S     N L++  +K G +D+A + F ++P R                            
Sbjct: 35  SSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNET 94

Query: 464 ---GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
                ++WS+++ G  ++G   E L+ F QM  DG  P+  TL SVL AC+   L+    
Sbjct: 95  PIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLL---- 150

Query: 521 HHFESMEKKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            H   M   + I+   E        ++D+  +     EA  L  ++P + N   W A+L
Sbjct: 151 -HTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAML 208


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 285/774 (36%), Positives = 464/774 (59%), Gaps = 8/774 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+++C    D  LG QV G V+ +G D+   VANSL+ M+  C +  ++  +FD + ER 
Sbjct: 166 VIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERD 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWNS+ +  VH    E+++ +F +M  +  + +  ++S+++  C  + +   GR +HG
Sbjct: 226 TISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHG 285

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G +S++   N+L+ MY++ G  EDA  VF  +   D++SWN+++A  V + +   
Sbjct: 286 MVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPR 345

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  +M  +    N  T+T+AL AC  +E  ++   +H  +I + +  + I+G  LV 
Sbjct: 346 ALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVT 402

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K GSM  A+ +  +MP+++ + WN +I GH  N     A   F  +  EGV  +  T
Sbjct: 403 MYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYIT 462

Query: 301 LSTVLKSVASFQAI---GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           +  +L +  S   +   G+   +HA  V   FE + ++ +SLI  Y +CG +  +  IF 
Sbjct: 463 IVNLLSAFLSPDDLLDHGM--PIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFD 520

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             +  +     ++++A A +G GEEALKL ++M++  I+ D F  S       NL+  ++
Sbjct: 521 VLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDE 580

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q+H  IIK GF S+ +  N+ ++MY KCG IDD  R   +   R   SW+ +I  LA+
Sbjct: 581 GQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALAR 640

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG  ++A + F +ML+ G+ P+H+T VS+L AC+H GLV E   +F SM  KFG+    E
Sbjct: 641 HGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIE 700

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           H  C+ID+LGRAGK  EA   ++ MP      VW +LL A +I+ N+E+ + AA+ LF +
Sbjct: 701 HCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFEL 760

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +    S +VL SN+ AS   W +V  VR+ M+ + +KK+P  SW+++K++V TF +GD+ 
Sbjct: 761 DSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQY 820

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H ++ EIYAKL+E+  ++ +AGY+P     L D +E +KE  L++HSE++A+AFGLI + 
Sbjct: 821 HPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSS 880

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G+ +R+ KNLR+C DCH+ F+ +S+I+ R+II+RD  RFHHF +G CSC  YW
Sbjct: 881 EGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 281/551 (50%), Gaps = 19/551 (3%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY+K G+   ++ +FD +PER+  SWN+L S +V   + ++A+ FF  M+  G+RP+ + 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 99  LSSMINACAGSGDSLLGR-KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
            +S++ AC  SG    G  ++H + IK G   D+F   +L+  Y   G + +   VFK+I
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
           E P+IVSW +++ G   +      + ++++++   +  N     + +++C  +  K LG 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+  S+IK  + +   V   L+ M+  C S++EA  +F  M E++ I+WN +I+  + NG
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              ++   F  M       D  T+S +L    S Q +   + +H + VK+  ES+  + N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SL+  Y + G  EDA  +F +    DL++  SM+ ++   G    AL+L +EM       
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           +    ++ L+AC NL   E  K VH  +I  G   +   GN+LV MY K GS+  A R  
Sbjct: 361 NYVTFTTALSACYNL---ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA-------C 510
             +PDR  V+W+A+IGG A +     A++ F  + E+GV  N+IT+V++L A        
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLL 477

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +H G+   A       E +  +Q      + +I +  + G    +  + D +    N+S 
Sbjct: 478 DH-GMPIHAHIVVAGFELETFVQ------SSLITMYAQCGDLNTSNYIFDVLA-NKNSST 529

Query: 571 WGALLGAARIY 581
           W A+L A   Y
Sbjct: 530 WNAILSANAHY 540



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/599 (25%), Positives = 293/599 (48%), Gaps = 8/599 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
             QVH  V+  G   D FV  SL+  Y   G   +   +F  I E ++VSW SL   Y +
Sbjct: 78  AFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAY 137

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              ++E +  ++ +   G+  NE +++++I +C    D +LG ++ G  IK G D+ +  
Sbjct: 138 NGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSV 197

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           AN+L+ M+    ++E+A  VF D++  D +SWN++I   V + H + +L+ F QM+ +  
Sbjct: 198 ANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHA 257

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             +  T ++ L  C   +    GR LH  ++K  ++S+  V   L+ MY++ G  ++A  
Sbjct: 258 KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEF 317

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +FH M E++LI+WN +++ H+ NG    A  L   M +     +  T +T L +  + + 
Sbjct: 318 VFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLET 377

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   K VHA  +      +  I N+L+  YGK G +  A ++ K     D V   ++I  
Sbjct: 378 L---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG 434

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA-CANLSAYEQGKQVHVHIIKFGFMS 432
           +A       A++ +  +++  +  +     +LL+A  +     + G  +H HI+  GF  
Sbjct: 435 HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFEL 494

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +TF  +SL+ MYA+CG ++ ++  F  + ++   +W+A++   A +G G+EAL++  +M 
Sbjct: 495 ETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMR 554

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            DG+  +  +         +  L+ E +    S+  K G +         +D+ G+ G+ 
Sbjct: 555 NDGIHLDQFSFSVAHAIIGNLTLLDEGQ-QLHSLIIKHGFESNDYVLNATMDMYGKCGEI 613

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA-AEML-FAIEPEKSSTHVLLS 609
            +   ++   P   +   W  L+ A   +   +  + A  EML   + P+  +   LLS
Sbjct: 614 DDVFRIL-PQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLS 671


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/749 (39%), Positives = 438/749 (58%), Gaps = 10/749 (1%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D ++A+SLV MY +CG+   +  +F  I  +S+V W  L S YV       A+  F  ++
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             GI  +     S+++AC+       GR IH  +++ G       A+ALV MY + G+L 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 149 DAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           DA A+F  +E H D+V WNA+I     +     AL++F +M    I P++ T+ S  KAC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 208 AGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           +          +  H  L +  + SD +V   LV+ YA+CG +D AR  F  MPE+N ++
Sbjct: 241 SSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVS 300

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W  +I+   Q G  + A   F  M  EGV     T ST+  ++   + +   + V A++ 
Sbjct: 301 WTSMIAAFAQIG-HLLAVETFHAMLLEGV---VPTRSTLFAALEGCEDLHTARLVEAIAQ 356

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIF--KESSAVDLVACTSMITAYAQFGLGEEA 383
           +    +D  IV  L+ AY +C   EDA+++F  +E    D    T+MI  YAQ       
Sbjct: 357 EIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRST 416

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVN 442
            KL+    +R I+PD  +  + L+ACA+L+A  +G+Q+H  +     +  D   GN++V+
Sbjct: 417 FKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVS 476

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY +CGS+ DA  AF  +P R  +SW+AM+   AQHGR ++   +F  ML++G     + 
Sbjct: 477 MYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVA 536

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            +++L AC HAGLV     HF +M    G+ P  EHY CM+D+LGR G+  +A  +V  M
Sbjct: 537 FLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           P   +A+ W AL+GA RIY + E G+ AAE +  +    ++ +V L NIY++AG W++ A
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAA 656

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            VR+ M D  L+K PG+S IE++ KV+ F V DRSH +S+ IYA+L+ V   + +AGY  
Sbjct: 657 AVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRA 716

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
           +    LHDVEE +KEQLL  HSEKLA+AFG+++TP G+T+RV KNLR+CVDCH + +FIS
Sbjct: 717 VTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFIS 776

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K+  REI+VRDV RFHHF++G+CSCG YW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 235/522 (45%), Gaps = 26/522 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VL AC+S++ L  G  +H   V  G    E VA++LV MY +CG+  D+  LF  +    
Sbjct: 134 VLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHL 193

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VV WN++ +         EA+  F  M+  GI P+  +  S+  AC+ S  SL   ++ 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS-SSPSLRASQVK 252

Query: 120 GYSIKL---GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           G+   L   G  SD+  A ALV+ YA+ G ++ A   F  +   + VSW ++IA      
Sbjct: 253 GFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIG 312

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H   A++ F  M    + P   T  +AL+ C  +    L   +     ++ + +D  +  
Sbjct: 313 HL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARL---VEAIAQEIGVATDVAIVT 368

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI--VISGHLQNGGDMEAASLFPWMYREGV 294
            LV  YA+C   ++A  +F    E    A  +  +I+ + Q         L+      G+
Sbjct: 369 DLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHA-LSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
             D+    T L + AS  A+   +Q+HA ++     + D  + N+++  YG+CG + DA 
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
             F    A D ++  +M++A AQ G  E+   L+  M     + +     +LL+ACA+  
Sbjct: 489 DAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAG 548

Query: 414 AYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD---RAFSEIPDRGIVSWS 469
             E G +         G +  T     +V++  + G + DA    +A    PD    +W 
Sbjct: 549 LVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPD--AATWM 606

Query: 470 AMIGGLAQHG---RGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           A++G    +G   RG+ A +   ++LE  +  NH      LC
Sbjct: 607 ALMGACRIYGDTERGRFAAE---RVLE--LRANHTAAYVALC 643


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 289/775 (37%), Positives = 453/775 (58%), Gaps = 6/775 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D+ LG  +HG+V+  G   D FV N+LV MY KCG   ++ ++FD +PE +
Sbjct: 152 VIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETN 211

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VSWNS+   +    F  ++     EM+   G+ P+  ++ +++  CAG G+  +G  IH
Sbjct: 212 LVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIH 271

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G ++KLG   ++   NA+V MY+K G L +A   F    + ++VSWN +I+   L    +
Sbjct: 272 GLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVN 331

Query: 180 WALKLFQQMK--SSEINPNMFTYTSALKACAG-MELKELGRQLHCSLIKMEIKSDPIVGV 236
            A  L Q+M+    E+  N  T  + L AC   ++L+ L ++LH    +   +   +   
Sbjct: 332 EAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSL-KELHGYSFRHCFQHVELSN- 389

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
             +  YAKCG+++ A  +FH + +K + +WN +I GH QNG   +A  L   M   G   
Sbjct: 390 AFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQP 449

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  T+S++L + A  +++   K++H   ++   E+D ++  SL+  Y  CG    A  +F
Sbjct: 450 DWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLF 509

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 +LV+  +MI+ Y+Q GL  E+L L+ +     I        S+  AC+ LSA  
Sbjct: 510 DRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALR 569

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GK+ H +++K     D F G S+++MYAK G I ++ + F  + D+ + SW+A+I    
Sbjct: 570 LGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHG 629

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG GKEA++++ +M + G +P+  T + +L AC HAGLV E   +F+ M+    I+P  
Sbjct: 630 IHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKL 689

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYAC+ID+L RAG+  +A+ LV+ MP +A+  +W +LL + R +  +E+G+  A+ L  
Sbjct: 690 EHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLE 749

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP+K+  +VLLSN+YA  G WD V +VR+ MK+  L+K+ G SWIEV  +VY+F VGD 
Sbjct: 750 LEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDS 809

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
              +S EI      + + +++ GY P   + LH+V E EK  +L  HSEKLA++FGL+ T
Sbjct: 810 LQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKT 869

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G T+R+ KNLRIC DCH + + ISK V REI+VRD  RFHHFR+G CSC  YW
Sbjct: 870 TKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 186/599 (31%), Positives = 321/599 (53%), Gaps = 13/599 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANS-LVVMYAKCGNFIDSRRLFDAIPER 59
           +L+AC ++KD+  G ++H  V  +    +++V N+ L+ MYA CG+ +DSR +FD +  +
Sbjct: 49  LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +++ WN+L S Y       + V  F ++V  +  +P+ F+  S+I AC G  D  LG  I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  IK+G   D+F  NALV MY K G +++A+ VF  +   ++VSWN++I     +  +
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228

Query: 179 DWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             +  L  +M   E + P++ T  + L  CAG    ++G  +H   +K+ +  + +V   
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG--VG 295
           +V MY+KCG ++EA+M F     KN+++WN +IS     G   EA +L   M  +G  + 
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMK 348

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            ++ T+  VL +      +   K++H  S +  F+  + + N+ I AY KCG +  A K+
Sbjct: 349 ANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSAEKV 407

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F       + +  ++I  +AQ G   +AL L  +M      PD F  SSLL ACA+L + 
Sbjct: 408 FHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSL 467

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + GK++H ++++ G  +D F G SL++ Y  CG    A   F  + D+ +VSW+AMI G 
Sbjct: 468 QYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGY 527

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           +Q+G   E+L +F + L +G+  + I +VSV  AC+    +   K     + K   +Q  
Sbjct: 528 SQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK--ALQTE 585

Query: 536 QEHYAC-MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
                C +ID+  ++G  +E+ ++ D +    N + W A++ A  I+ +   G+ A E+
Sbjct: 586 DAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIHGH---GKEAIEL 640



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 142/266 (53%), Gaps = 16/266 (6%)

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           I  L    NL    I+I  H QN      A+      +E +G        +L++  + + 
Sbjct: 12  IAALCETDNLTTALILIQSHSQN------AAFISLQAKEAIGL-------LLQACGNQKD 58

Query: 314 IGVCKQVHALSVKTAFESDDYIVNS-LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           I   +++H     +    +DY++N+ LI  Y  CG   D+  +F      +L+   ++++
Sbjct: 59  IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVS 118

Query: 373 AYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            Y + GL  + +K+++++  D +  PD+F   S++ AC  +     G+ +H  +IK G +
Sbjct: 119 GYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLV 178

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D F GN+LV MY KCG++D+A + F  +P+  +VSW++MI   +++G  +++  +  +M
Sbjct: 179 LDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM 238

Query: 492 L-EDGVLPNHITLVSVLCACNHAGLV 516
           L E+G+LP+ +T+V++L  C   G V
Sbjct: 239 LGEEGLLPDVVTVVTILPVCAGEGEV 264


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/772 (37%), Positives = 456/772 (59%), Gaps = 21/772 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDS--DEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           L+ C ++ D   G  VHG VV  G     D F AN L+ MY K G    +RRLFD +PER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++VS+ +L   +      E A   F+ +   G   N+F L++M+        + L   +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             + KLG+D + F  + L+D Y+    + DA  VF  I   D V W A+++    +  ND
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS---CYSEND 242

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
                F+  +S                C+ + +    + +H   IK    ++P VG  L+
Sbjct: 243 CPENAFRCAQS----------------CSLLAISCARQGIHGCAIKTLNDTEPHVGGALL 286

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG + +AR+ F ++P  ++I  + +IS + Q+  + +A  LF  + R  V  ++ 
Sbjct: 287 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 346

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +LS+VL++  +   +   KQ+H  ++K   ESD ++ N+L+D Y KC  ++ ++KIF   
Sbjct: 347 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+  +++  ++Q GLGEEAL ++ EMQ  ++       SS+L ACA+ ++     
Sbjct: 407 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 466

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  I K  F +DT  GNSL++ YAKCG I DA + F  + +R I+SW+A+I G A HG
Sbjct: 467 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 526

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           +  +AL++F +M +  V  N IT V++L  C   GLV      F+SM    GI+P  EHY
Sbjct: 527 QAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHY 586

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++ +LGRAG+  +A++ +  +P   +A VW ALL +  I+KNV +G+ +AE +  IEP
Sbjct: 587 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEP 646

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +  +T+VLLSN+YA+AG  D VA +R+ M++  ++K PG+SW+E+K +++ F+VG   H 
Sbjct: 647 QDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHP 706

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             + I A L+ ++   ++ GY+P +   LHDV++ +K ++L+ HSE+LA+A+GL+ TPPG
Sbjct: 707 DMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPG 766

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLR C+DCHT+F  ISKIV REIIVRD+NRFHHF +G CSCG YW
Sbjct: 767 HPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 239/485 (49%), Gaps = 27/485 (5%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS--DMFSANALVDMYAKVGNLEDAVA 152
           + F+ +  +  C   GD+  GR +HG+ ++ G     D+F AN L++MY K+G L  A  
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +   ++VS+  ++         + A  LF++++      N F  T+ LK    M+ 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             L   +H    K+    +  VG GL+D Y+ C  + +A  +F+ +  K+ + W  ++S 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ-VHALSVKTAFES 331
           + +N     A       +R                  S  AI   +Q +H  ++KT  ++
Sbjct: 238 YSENDCPENA-------FR-------------CAQSCSLLAISCARQGIHGCAIKTLNDT 277

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           + ++  +L+D Y KCG ++DA   F+     D++  + MI+ YAQ    E+A +L+L + 
Sbjct: 278 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 337

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              + P+ +  SS+L AC N+   + GKQ+H H IK G  SD F GN+L++ YAKC  +D
Sbjct: 338 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 397

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            + + FS + D   VSW+ ++ G +Q G G+EAL +F +M    +    +T  SVL AC 
Sbjct: 398 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 457

Query: 512 HAGLVAEAKHHFESMEKK-FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
               +  A     S+EK  F    +  +   +ID   + G  ++A+++   +  + +   
Sbjct: 458 STASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIIS 514

Query: 571 WGALL 575
           W A++
Sbjct: 515 WNAII 519



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 25/366 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ACT+   L  G Q+H   +  G +SD FV N+L+  YAKC +   S ++F ++ + +
Sbjct: 351 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 410

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN++   +      EEA+  F EM  + +   + + SS++ ACA +       +IH 
Sbjct: 411 EVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 470

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K  +++D    N+L+D YAK G + DA+ VF+ +   DI+SWNA+I+G  LH     
Sbjct: 471 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 530

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL-IKMEIKSDPIVGVGLV 239
           AL+LF +M  S +  N  T+ + L  C    L   G  L  S+ I   IK        +V
Sbjct: 531 ALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIV 590

Query: 240 DMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGG-----------------DME 281
            +  + G +++A      +P   + + W  ++S  + +                   D  
Sbjct: 591 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDET 650

Query: 282 AASLFPWMYREGVGFDQTTL------STVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
              L   MY      DQ  L      +  ++ V     + +  ++HA SV +    D  +
Sbjct: 651 TYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRV 710

Query: 336 VNSLID 341
           +N++++
Sbjct: 711 INAMLE 716


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/732 (38%), Positives = 440/732 (60%), Gaps = 4/732 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +CT  +    G  +H      GF S+ FV N+++ +Y +CG+F  + R+F  +P R 
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F+EM  SG+ P+  ++SS++ ACA  GD   G ++H 
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K G  SD     +L+D+Y K G++E A+ +F   +  ++V WN ++      + ND 
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA--FGQINDL 326

Query: 181 A--LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           A   +LF QM+++ I PN FTY   L+ C      +LG Q+H   +K   +SD  V   L
Sbjct: 327 AKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVL 386

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY+K G +++AR +  ++ EK++++W  +I+G++Q+    +A + F  M + G+  D 
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDN 446

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             L++ +   A   A+    Q+HA    + +  D  I N+L++ Y +CG + +A   F+E
Sbjct: 447 IGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE 506

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D +    +++ +AQ GL EEALK+++ M    +  + F   S L+A ANL+  +QG
Sbjct: 507 IEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H  +IK G   +T  GN+L+++Y KCGS +DA   FSE+ +R  VSW+ +I   +QH
Sbjct: 567 KQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQH 626

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG EAL +F QM ++G+ PN +T + VL AC+H GLV E   +F+SM  ++GI+P  +H
Sbjct: 627 GRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDH 686

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC+IDI GRAG+   A + ++ MP  A+A VW  LL A +++KN+EVG+ AA+ L  +E
Sbjct: 687 YACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELE 746

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+++VLLSN YA    W N  +VR+ M+D  ++KEPG SWIEVK+ V+ F VGDR H
Sbjct: 747 PHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLH 806

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             +++IY  L  ++D + K GY        HD E+  ++     HSEKLAV FGL++ PP
Sbjct: 807 PLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPP 866

Query: 719 GATIRVKKNLRI 730
              +RV KNLR+
Sbjct: 867 CMPLRVIKNLRV 878



 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/560 (32%), Positives = 303/560 (54%), Gaps = 2/560 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H   V  G      V N L+ +Y+K G  + +RR+F+ +  R  VSW ++ S Y    
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EEA+  +++M  +G+ P  + LSS++++C  +     GR IH    K G+ S++F  N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           A++ +Y + G+   A  VF D+ H D V++N +I+G     H + AL++F++M+ S ++P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T +S L ACA +   + G QLH  L K  I SD I+   L+D+Y KCG ++ A +IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           +     N++ WN+++    Q     ++  LF  M   G+  +Q T   +L++    + I 
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + +Q+H+LSVKT FESD Y+   LID Y K G +E A ++ +     D+V+ TSMI  Y 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q    ++AL  + EMQ   I PD+   +S ++ CA ++A  QG Q+H  I   G+  D  
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             N+LVN+YA+CG I +A  +F EI  +  ++W+ ++ G AQ G  +EAL++F +M + G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V  N  T VS L A  +   + + K    +   K G     E    +I + G+ G F++A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGK-QIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601

Query: 556 MELVDTMPFQANASVWGALL 575
                 M  + N   W  ++
Sbjct: 602 KMEFSEMS-ERNEVSWNTII 620



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 203/417 (48%), Gaps = 7/417 (1%)

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK-ELGRQLHCS 222
           S    +AG + HE     L LF              +  AL+AC G   + ++  ++H  
Sbjct: 8   SLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAK 67

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
            +   +    IVG  L+D+Y+K G +  AR +F  +  ++ ++W  ++SG+ QNG   EA
Sbjct: 68  AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             L+  M+R GV      LS+VL S    +     + +HA   K  F S+ ++ N++I  
Sbjct: 128 LGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITL 187

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y +CG    A ++F +    D V   ++I+ +AQ G GE AL+++ EMQ   ++PD    
Sbjct: 188 YLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTI 247

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           SSLL ACA+L   ++G Q+H ++ K G  SD     SL+++Y KCG ++ A   F+    
Sbjct: 248 SSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDR 307

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAK 520
             +V W+ M+    Q     ++ ++F QM   G+ PN  T   +L  C C     + E  
Sbjct: 308 TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI 367

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           H   S+  K G +        +ID+  + G  ++A  +++ +  + +   W +++  
Sbjct: 368 H---SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAG 420


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/732 (38%), Positives = 440/732 (60%), Gaps = 4/732 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +CT  +    G  +H      GF S+ FV N+++ +Y +CG+F  + R+F  +P R 
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F+EM  SG+ P+  ++SS++ ACA  GD   G ++H 
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K G  SD     +L+D+Y K G++E A+ +F   +  ++V WN ++      + ND 
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA--FGQINDL 326

Query: 181 A--LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           A   +LF QM+++ I PN FTY   L+ C      +LG Q+H   +K   +SD  V   L
Sbjct: 327 AKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVL 386

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY+K G +++AR +  ++ EK++++W  +I+G++Q+    +A + F  M + G+  D 
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDN 446

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             L++ +   A   A+    Q+HA    + +  D  I N+L++ Y +CG + +A   F+E
Sbjct: 447 IGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE 506

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D +    +++ +AQ GL EEALK+++ M    +  + F   S L+A ANL+  +QG
Sbjct: 507 IEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H  +IK G   +T  GN+L+++Y KCGS +DA   FSE+ +R  VSW+ +I   +QH
Sbjct: 567 KQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQH 626

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG EAL +F QM ++G+ PN +T + VL AC+H GLV E   +F+SM  ++GI+P  +H
Sbjct: 627 GRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDH 686

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC+IDI GRAG+   A + ++ MP  A+A VW  LL A +++KN+EVG+ AA+ L  +E
Sbjct: 687 YACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELE 746

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+++VLLSN YA    W N  +VR+ M+D  ++KEPG SWIEVK+ V+ F VGDR H
Sbjct: 747 PHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLH 806

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             +++IY  L  ++D + K GY        HD E+  ++     HSEKLAV FGL++ PP
Sbjct: 807 PLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPP 866

Query: 719 GATIRVKKNLRI 730
              +RV KNLR+
Sbjct: 867 CMPLRVIKNLRV 878



 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/560 (32%), Positives = 303/560 (54%), Gaps = 2/560 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H   V  G      V N L+ +Y+K G  + +RR+F+ +  R  VSW ++ S Y    
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EEA+  +++M  +G+ P  + LSS++++C  +     GR IH    K G+ S++F  N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           A++ +Y + G+   A  VF D+ H D V++N +I+G     H + AL++F++M+ S ++P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T +S L ACA +   + G QLH  L K  I SD I+   L+D+Y KCG ++ A +IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           +     N++ WN+++    Q     ++  LF  M   G+  +Q T   +L++    + I 
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + +Q+H+LSVKT FESD Y+   LID Y K G +E A ++ +     D+V+ TSMI  Y 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q    ++AL  + EMQ   I PD+   +S ++ CA ++A  QG Q+H  I   G+  D  
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             N+LVN+YA+CG I +A  +F EI  +  ++W+ ++ G AQ G  +EAL++F +M + G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V  N  T VS L A  +   + + K    +   K G     E    +I + G+ G F++A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGK-QIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601

Query: 556 MELVDTMPFQANASVWGALL 575
                 M  + N   W  ++
Sbjct: 602 KMEFSEMS-ERNEVSWNTII 620



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 203/417 (48%), Gaps = 7/417 (1%)

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK-ELGRQLHCS 222
           S    +AG + HE     L LF              +  AL+AC G   + ++  ++H  
Sbjct: 8   SLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAK 67

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
            +   +    IVG  L+D+Y+K G +  AR +F  +  ++ ++W  ++SG+ QNG   EA
Sbjct: 68  AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             L+  M+R GV      LS+VL S    +     + +HA   K  F S+ ++ N++I  
Sbjct: 128 LGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITL 187

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y +CG    A ++F +    D V   ++I+ +AQ G GE AL+++ EMQ   ++PD    
Sbjct: 188 YLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTI 247

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           SSLL ACA+L   ++G Q+H ++ K G  SD     SL+++Y KCG ++ A   F+    
Sbjct: 248 SSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDR 307

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAK 520
             +V W+ M+    Q     ++ ++F QM   G+ PN  T   +L  C C     + E  
Sbjct: 308 TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI 367

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           H   S+  K G +        +ID+  + G  ++A  +++ +  + +   W +++  
Sbjct: 368 H---SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAG 420


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/732 (38%), Positives = 440/732 (60%), Gaps = 4/732 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +CT  +    G  +H      GF S+ FV N+++ +Y +CG+F  + R+F  +P R 
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F+EM  SG+ P+  ++SS++ ACA  GD   G ++H 
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K G  SD     +L+D+Y K G++E A+ +F   +  ++V WN ++      + ND 
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA--FGQINDL 326

Query: 181 A--LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           A   +LF QM+++ I PN FTY   L+ C      +LG Q+H   +K   +SD  V   L
Sbjct: 327 AKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVL 386

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY+K G +++AR +  ++ EK++++W  +I+G++Q+    +A + F  M + G+  D 
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDN 446

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             L++ +   A   A+    Q+HA    + +  D  I N+L++ Y +CG + +A   F+E
Sbjct: 447 IGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE 506

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D +    +++ +AQ GL EEALK+++ M    +  + F   S L+A ANL+  +QG
Sbjct: 507 MELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H  +IK G   +T  GN+L+++Y KCGS +DA   FSE+ +R  VSW+ +I   +QH
Sbjct: 567 KQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQH 626

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG EAL +F QM ++G+ PN +T + VL AC+H GLV E   +F+SM  ++GI+P  +H
Sbjct: 627 GRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDH 686

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC+IDI GRAG+   A + ++ MP  A+A VW  LL A +++KN+EVG+ AA+ L  +E
Sbjct: 687 YACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELE 746

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+++VLLSN YA    W N  +VR+ M+D  ++KEPG SWIEVK+ V+ F VGDR H
Sbjct: 747 PHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLH 806

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             +++IY  L  ++D + K GY        HD E+  ++     HSEKLAV FGL++ PP
Sbjct: 807 PLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPP 866

Query: 719 GATIRVKKNLRI 730
              +RV KNLR+
Sbjct: 867 CMPLRVIKNLRV 878



 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 182/560 (32%), Positives = 302/560 (53%), Gaps = 2/560 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H   V  G      V N L+ +Y+K G  + +RR+F+ +  R  VSW ++ S Y    
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EEA+  +++M  +G+ P  + LSS++++C  +     GR IH    K G+ S++F  N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           A++ +Y + G+   A  VF D+ H D V++N +I+G     H + AL++F++M+ S ++P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T +S L ACA +   + G QLH  L K  I SD I+   L+D+Y KCG ++ A +IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           +     N++ WN+++    Q     ++  LF  M   G+  +Q T   +L++    + I 
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + +Q+H+LSVKT FESD Y+   LID Y K G +E A ++ +     D+V+ TSMI  Y 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q    ++AL  + EMQ   I PD+   +S ++ CA ++A  QG Q+H  I   G+  D  
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             N+LVN+YA+CG I +A  +F E+  +  ++ + ++ G AQ G  +EAL++F +M + G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V  N  T VS L A  +   + + K    +   K G     E    +I + G+ G F++A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGK-QIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601

Query: 556 MELVDTMPFQANASVWGALL 575
                 M  + N   W  ++
Sbjct: 602 KMEFSEMS-ERNEVSWNTII 620



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 197/402 (49%), Gaps = 6/402 (1%)

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK-ELGRQLHCS 222
           S    +AG + HE     L LF              +  AL+AC G   + ++  ++H  
Sbjct: 8   SLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAK 67

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
            +   +    IVG  L+D+Y+K G +  AR +F  +  ++ ++W  ++SG+ QNG   EA
Sbjct: 68  AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             L+  M+R GV      LS+VL S    +     + +HA   K  F S+ ++ N++I  
Sbjct: 128 LGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITL 187

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y +CG    A ++F +    D V   ++I+ +AQ G GE AL+++ EMQ   ++PD    
Sbjct: 188 YLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTI 247

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           SSLL ACA+L   ++G Q+H ++ K G  SD     SL+++Y KCG ++ A   F+    
Sbjct: 248 SSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDR 307

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAK 520
             +V W+ M+    Q     ++ ++F QM   G+ PN  T   +L  C C     + E  
Sbjct: 308 TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI 367

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
           H   S+  K G +        +ID+  + G  ++A  +++ +
Sbjct: 368 H---SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 165/321 (51%), Gaps = 3/321 (0%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV-ASFQAIGV 316
           M  +   +    ++G L +    +  SLF    R+  G      +  L++   + +   V
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
             ++HA +V         + N LID Y K G V  A ++F+E SA D V+  +M++ YAQ
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GLGEEAL LY +M    + P  +V SS+L++C     + QG+ +H    K GF S+ F 
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           GN+++ +Y +CGS   A+R F ++P R  V+++ +I G AQ G G+ AL++F +M   G+
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ +T+ S+L AC   G + +      S   K GI         ++D+  + G  + A+
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGT-QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 557 ELVDTMPFQANASVWGALLGA 577
            + ++   + N  +W  +L A
Sbjct: 300 VIFNSSD-RTNVVLWNLMLVA 319


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/767 (35%), Positives = 446/767 (58%), Gaps = 1/767 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL+ C  KK L  G +VH +++  G   DE +   LV MY  CG+ +  R++FD I    
Sbjct: 375  VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V  WN L S Y       E+V  FK+M   G+  N ++ + ++   A  G     +++HG
Sbjct: 435  VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            Y +KLG+ S+    N+L+  Y K G +E A  +F ++  PD+VSWN++I GCV++  +  
Sbjct: 495  YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
             L++F QM    +  ++ T  S L A A +    LGR LH   +K     + +    L+D
Sbjct: 555  GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY+KCG+++ A  +F  M +  +++W   I+ +++ G   +A  LF  M  +GV  D  T
Sbjct: 615  MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++++ + A   ++   + VH+  +K    S+  + N+LI+ Y KCG VE+A  +F +  
Sbjct: 675  VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 734

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              D+V+  +MI  Y+Q  L  EAL+L+L+MQ ++  PD    + +L ACA L+A ++G++
Sbjct: 735  VKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGRE 793

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            +H HI++ G+ SD     +LV+MYAKCG +  A   F  IP + ++SW+ MI G   HG 
Sbjct: 794  IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 853

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G EA+  F +M   G+ P+  +   +L AC+H+GL+ E    F SM  + G++P  EHYA
Sbjct: 854  GNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYA 913

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            C++D+L R G   +A + +++MP + + ++WG LL   RI+ +V++ +  AE +F +EP+
Sbjct: 914  CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPD 973

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             +  +V+L+N+YA A  W+ V K+R+ M+    K+ PG SWIEV  K   F  G+  H +
Sbjct: 974  NTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQ 1033

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +K I   L +++  +    Y  M    L + ++ EKE +   HSEK A+AFG++  PPG 
Sbjct: 1034 AKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGR 1093

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
            T+RV KN R+C DCH   +F+SK   REI++RD NRFHHF++G CSC
Sbjct: 1094 TVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSC 1140



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 282/548 (51%), Gaps = 15/548 (2%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           S  S++  CA       G+++H   I  G   D      LV MY   G+L     +F  I
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
            +  +  WN +++      +   ++ LF++M+   +  N +T+T  LK  A +   +  +
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           ++H  ++K+   S+  V   L+  Y K G ++ A  +F  + E ++++WN +I+G + NG
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
                  +F  M   GV  D TTL +VL + A+   + + + +H   VK  F  +    N
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y KCG++  A ++F +     +V+ TS I AY + GL  +A+ L+ EMQ + + P
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D +  +S+++ACA  S+ ++G+ VH ++IK G  S+    N+L+NMYAKCGS+++A   F
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 730

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           S+IP + IVSW+ MIGG +Q+    EAL++F  M +    P+ IT+  VL AC  AGL A
Sbjct: 731 SKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPAC--AGLAA 787

Query: 518 EAKH---HFESMEKKFGIQPMQEHYAC-MIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
             K    H   + + +       H AC ++D+  + G    A  L D +P + +   W  
Sbjct: 788 LDKGREIHGHILRRGYF---SDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTV 843

Query: 574 LLGAARI--YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++    +  + N  +       +  IEP++SS  V+L N  + +G+ +   K    M+ N
Sbjct: 844 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL-NACSHSGLLNEGWKFFNSMR-N 901

Query: 632 KLKKEPGM 639
           +   EP +
Sbjct: 902 ECGVEPKL 909



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 217/440 (49%), Gaps = 12/440 (2%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  + KS E+  N  +Y S L+ CA  +  E G+++H  +I   I  D  +G  LV 
Sbjct: 355 AIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVF 412

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY  CG + + R IF  +    +  WN+++S + + G   E+ SLF  M + GV  +  T
Sbjct: 413 MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYT 472

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            + VLK  A+   +  CK+VH   +K  F S+  +VNSLI AY K G VE A  +F E S
Sbjct: 473 FTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 532

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+  SMI      G     L+++++M    +  D     S+L A AN+     G+ 
Sbjct: 533 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRA 592

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   +K  F  +    N+L++MY+KCG+++ A   F ++ D  IVSW++ I    + G 
Sbjct: 593 LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGL 652

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
             +A+ +F +M   GV P+  T+ S++  CAC+ +    +      S   K G+      
Sbjct: 653 YSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS---LDKGRDVHSYVIKNGMGSNLPV 709

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
              +I++  + G  +EA  +   +P +   S W  ++G    Y    +   A E+   ++
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVS-WNTMIGG---YSQNSLPNEALELFLDMQ 765

Query: 599 PEKSSTHVLLSNIY-ASAGM 617
            +     + ++ +  A AG+
Sbjct: 766 KQFKPDDITMACVLPACAGL 785


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/775 (36%), Positives = 453/775 (58%), Gaps = 6/775 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C + +D   GLQV   VV +G  +   VANSL+ M+       D+ RLFD + ER 
Sbjct: 151 VVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERD 210

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ S Y H +   +      +M    ++P+  +L S+++ CA S    LG  IH 
Sbjct: 211 RISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHS 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G    +   NALV+MY+  G L++A ++F+++   D++SWN +I+  V       
Sbjct: 271 LCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVE 330

Query: 181 ALK-LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+ L Q +++ E  PN  T++SAL AC+  E    GR +H  +++  +++  ++G  L+
Sbjct: 331 ALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLL 390

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY+KC SM++   +F  MP  ++++ N++  G+        A  +F WM   G+  +  
Sbjct: 391 TMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYI 450

Query: 300 T---LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           T   L    KS+    + G+   +HA   +T   SD+YI NSLI  Y  CG +E +  IF
Sbjct: 451 TMINLQGTCKSLGDLHSYGM--PLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIF 508

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              +   +++  ++I A  + G GEEA+KL+++ Q      D F  +  L++ ANL++ E
Sbjct: 509 SRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLE 568

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G Q+H   +K G   D+   N+ ++MY KCG +D   +   +   R    W+ +I G A
Sbjct: 569 EGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYA 628

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           ++G  KEA   F  M+  G  P+++T V++L AC+HAGL+ +   ++ SM   FG+ P  
Sbjct: 629 RYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGI 688

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +H  C++D+LGR GKF EA + +D MP   N  +W +LL ++R +KN+++G+ AA+ L  
Sbjct: 689 KHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLE 748

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P   S +VLLSN+YA+   W +V K+R  MK  KL K P  SW+++K++V TF +GDR
Sbjct: 749 LDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDR 808

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  +++IY KLDE+   L + GYV    + LHD +E +KE  L++HSEKLA+A+GL+  
Sbjct: 809 SHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVV 868

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P G+TIR+ KNLR+C DCH  F+ +S +  REI++RD  RFH F++GSCSC  +W
Sbjct: 869 PEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 288/574 (50%), Gaps = 15/574 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G  +H +    G   + ++  +L+ +Y   G  ++++RLF  +P+R+VVSW ++      
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              +EEA+  ++ M   G+  N  +L+++++ C    D + G ++  + +  G  + +  
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF---QQMKS 190
           AN+L+ M+  +  ++DA  +F  +E  D +SWNA+I+   ++ H +   K F     M+ 
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMIS---MYSHEEVYSKCFIVLSDMRH 239

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGSMD 249
            E+ P++ T  S +  CA  +L  LG  +H   +   +  S P++   LV+MY+  G +D
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN-ALVNMYSTAGKLD 298

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT-TLSTVLKSV 308
           EA  +F  M  +++I+WN +IS ++Q+   +EA      + +   G   + T S+ L + 
Sbjct: 299 EAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +S +A+   + +HA+ ++ + ++   I NSL+  Y KC  +ED  ++F+     D+V+C 
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCN 418

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIK 427
            +   YA       A++++  M+   I P+     +L   C +L   +  G  +H ++ +
Sbjct: 419 VLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQ 478

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G +SD +  NSL+ MYA CG ++ +   FS I ++ ++SW+A+I    +HGRG+EA+++
Sbjct: 479 TGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKL 538

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           F      G   +   L    C  + A L + E       +  K G+          +D+ 
Sbjct: 539 FMDSQHAGNKLDRFCLAE--CLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
           G+ GK    ++ +   P       W  L+ G AR
Sbjct: 597 GKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYAR 629



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 223/463 (48%), Gaps = 4/463 (0%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---DS 112
           +P R+  SW +  S    C     A    + M    +  + F+L+S++ AC   G    +
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             G  IH  + + G   +++   AL+ +Y   G + +A  +F ++   ++VSW A++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             +   + AL  +++M+   +  N     + +  C  +E +  G Q+   ++   + +  
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+ M+     + +A  +F  M E++ I+WN +IS +       +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  D TTL +++   AS   + +   +H+L V +       ++N+L++ Y   G +++A
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE-MQDREINPDSFVCSSLLNACAN 411
             +F+  S  D+++  +MI++Y Q     EAL+   + +Q  E  P+S   SS L AC++
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS 360

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
             A   G+ +H  I++    +    GNSL+ MY+KC S++D +R F  +P   +VS + +
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
            GG A       A+++F  M   G+ PN+IT++++   C   G
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 4/308 (1%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV---GFDQTTLSTVLKSVASFQAI 314
           MP +   +W   +SG  + G +  A +L   M    V   GF   +L T  +     +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
                +HAL+ +     + YI  +L+  YG  G V +A ++F E    ++V+ T+++ A 
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           +  G  EEAL  Y  M+   +  ++   +++++ C  L     G QV  H++  G ++  
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
              NSL+ M+     + DA+R F  + +R  +SW+AMI   +      +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            V P+  TL S++  C  + LVA       S+    G+         ++++   AGK  E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGS-GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 555 AMELVDTM 562
           A  L   M
Sbjct: 300 AESLFRNM 307


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/655 (40%), Positives = 412/655 (62%), Gaps = 1/655 (0%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   +  G     F     V+    +G +  A  VF +   P +  WNA+I G   H 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A++++ +M++S +NP+ FT    LKAC+G+ + E+G+++H  + ++  +SD  V  
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           GLV +YAKCG +++AR++F  + ++N+++W  +ISG+ QNG  MEA  +F  M +  V  
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   L +VL++    + +   K +H   VK   E +  ++ SL   Y KCG V  A   F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +    +++   +MI+ YA+ G   EA+ L+ EM  + I  DS    S + ACA + + +
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
             K +  +I K  + +D F   +L++M+AKCGS+D A   F    D+ +V WSAMI G  
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HGRG++A+ +F  M + GV PN +T V +L ACNH+GLV E    F SM K +GI+   
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARH 507

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +HYAC++D+LGR+G   EA + + TMP +   SVWGALLGA +IY++V +G++AAE LF+
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFS 567

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P  +  +V LSN+YAS+ +WD+VAKVR  M++  L K+ G S IE+  K+  F VGD+
Sbjct: 568 LDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDK 627

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH R KEI+ +L+ +   L +AG++P +E+ LHD+ + EKE+ L +HSE+LA+A+GLI+T
Sbjct: 628 SHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLIST 687

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            PG T+R+ KNLR C++CH++ + ISK+V+REI+VRD NRFHHF+NG CSC  YW
Sbjct: 688 APGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 244/459 (53%), Gaps = 1/459 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  +V +G     F+    V      G    +R++FD  PE SV  WN++   Y   +
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           F  +A+  +  M  SG+ P+ F+L  ++ AC+G     +G+++HG   +LG++SD+F  N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            LV +YAK G +E A  VF+ ++  +IVSW ++I+G   +     AL++F QM+   + P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +     S L+A   +E  E G+ +H  ++KM ++ +P + + L  MYAKCG +  AR  F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M   N++ WN +ISG+ +NG   EA  LF  M  + +  D  T+ + + + A   ++ 
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + K +     KT + +D ++  +LID + KCG V+ A ++F  +   D+V  ++MI  Y 
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G++A+ L+  M+   + P+      LL AC +    E+G ++   +  +G  +   
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQ 508

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
               +V++  + G +++A    + +P + G+  W A++G
Sbjct: 509 HYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 13/467 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+    L +G +VHG +   GF+SD FV N LV +YAKCG    +R +F+ + +R+
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRN 234

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW S+ S Y       EA+  F +M    ++P+  +L S++ A     D   G+ IHG
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K+G + +     +L  MYAK G +  A + F  +E P+++ WNA+I+G   + + + 
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNE 354

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQ+M S  I  +  T  SA+ ACA +   +L + +   + K E ++D  V   L+D
Sbjct: 355 AVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALID 414

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M+AKCGS+D AR +F    +K+++ W+ +I G+  +G   +A  LF  M + GV  +  T
Sbjct: 415 MFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVT 474

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--- 357
              +L +      +    ++         E+       ++D  G+ GH+ +A        
Sbjct: 475 FVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMP 534

Query: 358 -ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E       A       Y    LGE A +    +     N   +V  S L A + L  ++
Sbjct: 535 IEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLD--PFNTGHYVQLSNLYASSRL--WD 590

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA---FSEI 460
              +V + + + G   D   G SL+ +  K  +    D++   F EI
Sbjct: 591 SVAKVRILMREKGLSKDL--GYSLIEINGKLQAFRVGDKSHPRFKEI 635


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/741 (37%), Positives = 446/741 (60%), Gaps = 5/741 (0%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N +V  Y K  N   +R LF+++  R+ VSW  +   Y   +  +EA   + EM  SG++
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+  + +++++    +       +IH + I+ G+ + +   N+LVD Y K   L+ A  +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F ++   D VS+N +I G   +   + ALKLF QM++ +  P+ FT+ + L    G E  
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             G+Q+H   IK     D  V   L+D Y+K   +D A+ +F  MPE + +++NI+I+G+
Sbjct: 261 IFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGY 320

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVKTAFES 331
             NG   ++  LF  +  +G  FD+     +T+L   A    + + +Q HA +V T   S
Sbjct: 321 AWNGQYEKSFDLFKRL--QGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           +  + N+L+D Y KC   EDA +IF   +  + V  T++I+ Y Q G  EEALK++ EM 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              ++ D    +S L A ANL++   GKQ+H  +I+ G +S  F+G+ LV+MYA CGS+ 
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMK 498

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           DA   F E+PDR IV W+A+I   +Q+G  +     F  M+E G+ P+ ++ +SVL AC+
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACS 558

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           H GLV +A  +F SM + + + P ++HYA MID+L R+G+F EA  L+  MPF+ +  +W
Sbjct: 559 HRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMW 618

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
            ++L + RI+KN ++ + AA+ LF ++  + ++ +V +SNIYA AG W+N AKV++ M++
Sbjct: 619 SSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRE 678

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             +KK    SW+E+  +V+ FT  DR+H ++++I  K++ + +L++K GY P     L +
Sbjct: 679 RGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQN 738

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V+E  K + L +HSE+LA+AF LI TP G+ I + KNLR CVDCH + + ISKIV REI 
Sbjct: 739 VDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREIT 798

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           VRD +RFHHFR+GSCSCG YW
Sbjct: 799 VRDSSRFHHFRDGSCSCGDYW 819



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 274/539 (50%), Gaps = 17/539 (3%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           LQ+H  ++  GF +   V NSLV  Y K      + +LF  +P +  VS+N + + Y   
Sbjct: 163 LQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKY 222

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
            F EEA+  F +M     +P+ F+ ++M+    GS D + G++IHG +IK  Y  D+F A
Sbjct: 223 GFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVA 282

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           NAL+D Y+K   ++ A  +F ++   D VS+N +I G   +   + +  LF++++ +  +
Sbjct: 283 NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFD 342

Query: 195 PNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
              F + + L + A +EL   +GRQ H   +     S+  VG  LVDMYAKC   ++A  
Sbjct: 343 RKNFPFATML-SVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANR 401

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           IF  +  +N + W  +IS ++Q G   EA  +F  M RE V  DQ T ++ LK+ A+  +
Sbjct: 402 IFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLAS 461

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + KQ+H+  ++    S  +  + L+D Y  CG ++DA+++FKE    ++V   ++I+A
Sbjct: 462 VSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISA 521

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y+Q G  E     + +M +  + PDS    S+L AC++    E+       +  F  M+ 
Sbjct: 522 YSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKA------LWYFNSMTQ 575

Query: 434 TFAGN-------SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEAL 485
            +  +       +++++  + G  ++A+   SE+P +   V WS+++     H     A 
Sbjct: 576 VYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAK 635

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +   Q+ +   L +    V++      AG    A    ++M ++ G++ +  +    ID
Sbjct: 636 KAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRER-GVKKVTAYSWVEID 693



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 225/458 (49%), Gaps = 35/458 (7%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAIPERSVVSWNSL 67
           +D+  G Q+HG+ + T +  D FVAN+L+  Y+K  ++ID ++ LFD +PE   VS+N +
Sbjct: 258 EDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSK-HDYIDLAKNLFDEMPELDGVSYNII 316

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
            + Y      E++   FK +  +      F  ++M++  A   +  +GR+ H  ++    
Sbjct: 317 ITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTA 376

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
            S++   NALVDMYAK    EDA  +F ++ + + V W A+I+  V    ++ ALK+F++
Sbjct: 377 VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKE 436

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M    ++ +  T+ S LKA A +    LG+QLH S+I++ + S    G  LVDMYA CGS
Sbjct: 437 MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGS 496

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           M +A  +F  MP++N++ WN +IS + QNG      S F  M   G+  D  +  +VL  
Sbjct: 497 MKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLT- 555

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
                         A S +   E   +  NS+   Y     ++   K +           
Sbjct: 556 --------------ACSHRGLVEKALWYFNSMTQVY----KLDPRRKHY----------- 586

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            +MI    + G   EA  L  EM      PD  + SS+LN+C      +  K+    + K
Sbjct: 587 ATMIDVLCRSGRFNEAENLISEM---PFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFK 643

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              + D  A  ++ N+YA+ G  ++A +    + +RG+
Sbjct: 644 MDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGV 681



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 216/445 (48%), Gaps = 2/445 (0%)

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           S N +V  Y K  NL  A  +F+ +   + VSW  +I G   +     A  L+ +M  S 
Sbjct: 79  SVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSG 138

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + P+  T+ + L         +   Q+H  +I+    +  IV   LVD Y K   +D A 
Sbjct: 139 VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIAS 198

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP K+ +++N++I+G+ + G   EA  LF  M          T + +L      +
Sbjct: 199 QLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSE 258

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   +Q+H L++KT++  D ++ N+L+D Y K  +++ A  +F E   +D V+   +IT
Sbjct: 259 DVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA  G  E++  L+  +Q    +  +F  +++L+  A       G+Q H   +    +S
Sbjct: 319 GYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +   GN+LV+MYAKC   +DA+R F+ +  R  V W+A+I    Q G  +EAL+MF +M 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            + V  +  T  S L A  +   V+  K    S+  + G+       + ++D+    G  
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSV-IRLGLLSSVFSGSVLVDMYANCGSM 497

Query: 553 QEAMELVDTMPFQANASVWGALLGA 577
           ++A+E+   MP   N   W AL+ A
Sbjct: 498 KDAIEVFKEMP-DRNIVCWNALISA 521



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +T + N +V+ Y K  ++  A   F  +  R  VSW+ MIGG +Q+ + KEA  ++ +M 
Sbjct: 76  NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             GV P+HIT  ++L   +    + E      S   +FG       +  ++D   +    
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVL-QIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194

Query: 553 QEAMELVDTMPFQANAS 569
             A +L   MP + + S
Sbjct: 195 DIASQLFSEMPTKDSVS 211


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/691 (38%), Positives = 424/691 (61%), Gaps = 2/691 (0%)

Query: 83  FFKEMVLSGIRPNEF-SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMY 141
           F K +  SG + ++  +++ +I   A + +   G+++H   I+ G   + F +N  +++Y
Sbjct: 61  FLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLY 120

Query: 142 AKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYT 201
           +K G L+  + +F  +   ++VSW ++I G   +     AL  F QM+        F  +
Sbjct: 121 SKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALS 180

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           S L+AC  +   + G Q+HC ++K     +  VG  L DMY+KCG + +A   F  MP K
Sbjct: 181 SVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK 240

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           + + W  +I G ++NG   +A + +  M  + V  DQ  L + L + ++ +A    K +H
Sbjct: 241 DAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLH 300

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLG 380
           A  +K  FE + +I N+L D Y K G +  A  +F+  S  + +V+ T++I  Y +    
Sbjct: 301 ATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQI 360

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E+AL  +++++ R I P+ F  +SL+ ACAN +  E G Q+H  ++KF F  D F  ++L
Sbjct: 361 EKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTL 420

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MY KCG  D + + F EI +   ++W+ ++G  +QHG G+ A++ F  M+  G+ PN 
Sbjct: 421 VDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNA 480

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T V++L  C+HAG+V +  ++F SMEK +G+ P +EHY+C+ID+LGRAGK +EA + ++
Sbjct: 481 VTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFIN 540

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            MPF+ N   W + LGA +I+ ++E  + AA+ L  +EPE S  HVLLSNIYA    W++
Sbjct: 541 NMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWED 600

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V  +R+ +KD  + K PG SW+++++K + F V D SH + KEIY KLD + D + + GY
Sbjct: 601 VQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGY 660

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           VP  E+ L D++++ KE+LL++HSE++AVAF L+  P G  I VKKNLR+C DCH++ +F
Sbjct: 661 VPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKF 720

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ISK+  R IIVRD++RFHHF NGSCSCG YW
Sbjct: 721 ISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 257/487 (52%), Gaps = 3/487 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++     K+L  G Q+H +++  G   + F++N  + +Y+KCG    + +LFD + +R+
Sbjct: 81  LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN 140

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW S+ + + H    +EA+  F +M + G    +F+LSS++ AC   G    G ++H 
Sbjct: 141 MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHC 200

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G+  ++F  + L DMY+K G L DA   F+++   D V W ++I G V +     
Sbjct: 201 LVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKK 260

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  + +M + ++  +     S L AC+ ++    G+ LH +++K+  + +  +G  L D
Sbjct: 261 ALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTD 320

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MY+K G M  A  +F +  +  ++++   +I G+++     +A S F  + R G+  ++ 
Sbjct: 321 MYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEF 380

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ++++K+ A+   +    Q+H   VK  F+ D ++ ++L+D YGKCG  + ++++F E 
Sbjct: 381 TFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEI 440

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D +A  +++  ++Q GLG  A++ +  M  R + P++    +LL  C++    E G 
Sbjct: 441 ENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGL 500

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
                + K +G +      + ++++  + G + +A+   + +P +  +  W + +G    
Sbjct: 501 NYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKI 560

Query: 478 HGRGKEA 484
           HG  + A
Sbjct: 561 HGDMERA 567


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/771 (36%), Positives = 449/771 (58%), Gaps = 2/771 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ +C    DL LG  VH   +  GF+SD ++ N+L+ MY++  +  ++R +F+ +  R 
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNSL S Y    F E+A+  + +  ++G+ P+ F++SS++ AC        G  +HG
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K+G   D+   N L+ MY K   L +A  VF  +   D V+WN +I G      ++ 
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++KLF  M    + P+M + TS ++AC      ++G+ +H  LI    + D +    L+D
Sbjct: 307 SVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +  A+ +F     K+ + WN +I+G+ Q+G   E    F  M  E    D  T
Sbjct: 366 MYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP-DSVT 424

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L   +    I   + +H   +K  FE++  I NSL+D Y KCG ++D +K+F   S
Sbjct: 425 FVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D+++  ++I +   F       ++  EM+   + PD      +L  C+ L+   QGK+
Sbjct: 485 AHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H +I K GF S+   GN+L+ MY+KCGS+++  + F  + ++ +V+W+A+I     +G 
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK+AL+ F  M   GVLP+ +  ++ + AC+H+G+V E    F+ M+  + ++P  EHYA
Sbjct: 605 GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYA 664

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R+G   +A E + +MP + +AS+WGALL A R   N  + Q  ++ +  +  +
Sbjct: 665 CVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSD 724

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +VL+SNIYA+ G WD V  VR  MK   LKKEPG SWIE++ +VY F  GD+S  +
Sbjct: 725 DTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQ 784

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
             ++   L+ +  L+ K GYV  ++  LHDVEE +K  +L  HSE+LA+AFGL+ T PG+
Sbjct: 785 YDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGS 844

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + V KNLR+C DCHT  ++I+KI+ REI+VRD NRFH F++G+CSCG +W
Sbjct: 845 PLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 304/582 (52%), Gaps = 5/582 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
           +LK  +S K+      VH +++ +G       +  L+  YA+  + I S  +F +I P  
Sbjct: 25  LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V  WNS+     H     +A+ ++ EM    ++P+ F+  S+IN+CA   D  LG  +H
Sbjct: 85  NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            +++++G++SD++  NAL+DMY++  +L++A  VF+++ + D VSWN++I+G   +   +
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL ++ + + + + P+ FT +S L AC  +   + G  +H  + K+ I  D I+G GL+
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLL 264

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY K   + EAR +F  M  K+ + WN +I G+ Q G    +  LF  M  +G   D  
Sbjct: 265 SMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDML 323

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           ++++ +++      + V K VH   + + FE D    N LID Y KCG +  A ++F  +
Sbjct: 324 SITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTT 383

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D V   S+I  Y Q G  +E L+ + +M   E  PDS     LL+  + L+   QG+
Sbjct: 384 KCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGR 442

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H  +IKFGF ++   GNSL+++YAKCG +DD  + FS +    I+SW+ +I       
Sbjct: 443 GIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFD 502

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
                 QM  +M  +G++P+  T++ +L  C+   +  + K     + K  G +      
Sbjct: 503 DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIG 561

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
             +I++  + G  +  +++   M  + +   W AL+ A  +Y
Sbjct: 562 NALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMY 602



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 250/502 (49%), Gaps = 8/502 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
            EF  SS++   + + ++   R +H   I  G    +  +  L+  YA+V +   +V+VF
Sbjct: 18  QEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVF 77

Query: 155 KDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           + I    ++  WN++I     +     AL  + +M+  ++ P+ FT+ S + +CA +   
Sbjct: 78  RSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDL 137

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           ELG  +H   ++M  +SD  +G  L+DMY++   +D AR +F  M  ++ ++WN +ISG+
Sbjct: 138 ELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGY 197

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
             NG   +A  ++      G+  D  T+S+VL +  S  A+     VH +  K     D 
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            I N L+  Y K   + +A ++F + +  D V   +MI  YAQ G  E ++KL+++M D 
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG 317

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + PD    +S + AC      + GK VH ++I  GF  DT A N L++MYAKCG +  A
Sbjct: 318 FV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F     +  V+W+++I G  Q G  KE L+ F +M++    P+ +T V +L   +  
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQL 435

Query: 514 GLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
             + + +  H + +  KFG +        ++D+  + G+  + +++   M      S W 
Sbjct: 436 ADINQGRGIHCDVI--KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WN 492

Query: 573 ALLGAARIYKNVEVG-QHAAEM 593
            ++ ++  + +  VG Q   EM
Sbjct: 493 TVIASSVHFDDCTVGFQMINEM 514


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 299/813 (36%), Positives = 455/813 (55%), Gaps = 78/813 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC+  K+  +G  V+  ++  GF+ +  V  S++ M+ KCG    +RR F+ I  + 
Sbjct: 196 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  WN + S Y      ++A+    +M LSG++P                          
Sbjct: 256 VFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP-------------------------- 289

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF------KDIEHPDIVSWNAVIAGCVL 174
                    D  + NA++  YA+ G  E+A   F      KD + P++VSW A+IAG   
Sbjct: 290 ---------DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK-PNVVSWTALIAGSEQ 339

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
           + ++  AL +F++M    + PN  T  SA+ AC  + L   GR++H   IK+E + SD +
Sbjct: 340 NGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 399

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  LVD YAKC S++ AR  F ++ + +L++WN +++G+   G   EA  L   M  +G
Sbjct: 400 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG 459

Query: 294 V------------GFDQ-----------------------TTLSTVLKSVASFQAIGVCK 318
           +            GF Q                       TT+S  L +    + + + K
Sbjct: 460 IEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK 519

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H   ++   E    + ++LI  Y  C  +E A  +F E S  D+V   S+I+A AQ G
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
               AL L  EM    +  ++    S L AC+ L+A  QGK++H  II+ G  +  F  N
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           SL++MY +CGSI  + R F  +P R +VSW+ MI     HG G +A+ +F Q    G+ P
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKP 699

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           NHIT  ++L AC+H+GL+ E   +F+ M+ ++ + P  E YACM+D+L RAG+F E +E 
Sbjct: 700 NHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           ++ MPF+ NA+VWG+LLGA RI+ N ++ ++AA  LF +EP+ S  +VL++NIY++AG W
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 819

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
           ++ AK+R  MK+  + K PG SWIEVK K+++F VGD SH   ++I AK++ +   + + 
Sbjct: 820 EDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEI 879

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GYVP     L DV+E EKE  L  HSEK+A+AFGLI+T  G  +R+ KNLR+C DCH++ 
Sbjct: 880 GYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSAT 939

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +FISK+  R+II+RD  RFHHF +G CSCG YW
Sbjct: 940 KFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 286/618 (46%), Gaps = 82/618 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C    +L LG QVH  +V  G D  EF+ + L+ +Y + G   D+RR+FD + ER+
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW ++   Y      EE +  F  MV  G+RP+ F    +  AC+   +  +G+ ++ 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y + +G++ +     +++DM+ K G ++ A   F++IE  D+  WN +++G         
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALK    MK S + P+  T+ +                                   ++ 
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNA-----------------------------------IIS 299

Query: 241 MYAKCGSMDEARMIFHLMP-----EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
            YA+ G  +EA   F  M      + N+++W  +I+G  QNG D EA S+F  M  EGV 
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVK 354
            +  T+++ + +  +   +   +++H   +K    +SD  + NSL+D Y KC  VE A +
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 355 IFKESSAVDLVACTSMITAYA-----------------------------------QFGL 379
            F      DLV+  +M+  YA                                   Q+G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G+ AL+ +  M    ++P++   S  L AC  +   + GK++H ++++      T  G++
Sbjct: 480 GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSA 539

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+ C S++ A   FSE+  R +V W+++I   AQ GR   AL +  +M    V  N
Sbjct: 540 LISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVN 599

Query: 500 HITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            +T+VS L AC+    + + K  H F     + G+         +ID+ GR G  Q++  
Sbjct: 600 TVTMVSALPACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKSRR 656

Query: 558 LVDTMPFQANASVWGALL 575
           + D MP Q +   W  ++
Sbjct: 657 IFDLMP-QRDLVSWNVMI 673



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 211/442 (47%), Gaps = 44/442 (9%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           +S++  C    +  LG ++H   +  G D   F  + L+++Y + G +EDA  +F  +  
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 160 PDIVSWNAVIAG-CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            ++ SW A++   C L ++ +  +KLF  M +  + P+ F +    KAC+ ++   +G+ 
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEE-TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           ++  ++ +  + +  V   ++DM+ KCG MD AR  F  +  K++  WNI++SG+   G 
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             +A      M   GV  DQ T                                    N+
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW-----------------------------------NA 296

Query: 339 LIDAYGKCGHVEDAVKIFKESSAV-----DLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           +I  Y + G  E+A K F E   +     ++V+ T++I    Q G   EAL ++ +M   
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNMYAKCGSIDD 452
            + P+S   +S ++AC NLS    G+++H + IK   + SD   GNSLV+ YAKC S++ 
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A R F  I    +VSW+AM+ G A  G  +EA+++  +M   G+ P+ IT   ++     
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476

Query: 513 AGLVAEAKHHFESMEKKFGIQP 534
            G    A   F+ M    G+ P
Sbjct: 477 YGDGKAALEFFQRMH-SMGMDP 497



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 149/310 (48%), Gaps = 1/310 (0%)

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L+       + +  QVHA  V    +  +++ + L++ Y + G VEDA ++F + S 
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++ + T+++  Y   G  EE +KL+  M +  + PD FV   +  AC+ L  Y  GK V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           + +++  GF  ++    S+++M+ KCG +D A R F EI  + +  W+ M+ G    G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           K+AL+    M   GV P+ +T  +++     +G   EA  +F  M      +P    +  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML-FAIEPE 600
           +I    + G   EA+ +   M  +        +  A     N+ + +H  E+  + I+ E
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 601 KSSTHVLLSN 610
           +  + +L+ N
Sbjct: 393 ELDSDLLVGN 402



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 117/250 (46%), Gaps = 7/250 (2%)

Query: 396 NPDSFV--CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           NPD  +   +S+L  C  L     G QVH  ++  G     F G+ L+ +Y + G ++DA
Sbjct: 84  NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            R F ++ +R + SW+A++      G  +E +++F  M+ +GV P+H     V  AC+  
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
                 K  ++ M    G +        ++D+  + G+   A    + + F+ +  +W  
Sbjct: 204 KNYRVGKDVYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNI 261

Query: 574 LL-GAARIYKNVEVGQHAAEM-LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++ G     +  +  +  ++M L  ++P++ + + ++S  YA +G ++  +K    M   
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEMGGL 320

Query: 632 KLKKEPGMSW 641
           K  K   +SW
Sbjct: 321 KDFKPNVVSW 330


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/631 (43%), Positives = 407/631 (64%), Gaps = 14/631 (2%)

Query: 150 AVAVFKDIEHPDIVSWNAVIA-----GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           A  VF  +   ++V+W  +I      GC        A+ LF  M+ S   P+ FTY+S L
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARD-----AIDLFLDMELSGYVPDRFTYSSVL 58

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC---GSMDEARMIFHLMPEK 261
            AC  + L  LG+QLH  +I++ +  D  VG  LVDMYAKC   GS+D++R +F  MPE 
Sbjct: 59  SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 118

Query: 262 NLIAWNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           N+++W  +I+ + Q+G  D EA  LF  M    +  +  + S+VLK+  +       +QV
Sbjct: 119 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 178

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           ++ +VK    S + + NSLI  Y + G +EDA K F      +LV+  +++  YA+    
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           EEA  L+ E+ D  I   +F  +SLL+  A++ A  +G+Q+H  ++K G+ S+    N+L
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++MY++CG+I+ A + F+E+ DR ++SW++MI G A+HG    AL+MF +MLE G  PN 
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           IT V+VL AC+H G+++E + HF SM K+ GI P  EHYACM+D+LGR+G   EAME ++
Sbjct: 359 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 418

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
           +MP  A+A VW  LLGA R++ N E+G+HAAEM+   EP+  + ++LLSN++ASAG W +
Sbjct: 419 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 478

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V K+R+ MK+  L KE G SWIEV+++V+ F VG+ SH ++ +IY +LD+++  + + GY
Sbjct: 479 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 538

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           +P  +  LHD+EE +KEQ L+ HSEK+AVAFGLI+T     IR+ KNLR+C DCHT+ ++
Sbjct: 539 IPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKY 598

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IS    REI+VRD NRFHH +NG CSC  YW
Sbjct: 599 ISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 249/453 (54%), Gaps = 9/453 (1%)

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
           ++FD +PER++V+W  + + +       +A+  F +M LSG  P+ F+ SS+++AC   G
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV---GNLEDAVAVFKDIEHPDIVSWNA 167
              LG+++H   I+LG   D+    +LVDMYAK    G+++D+  VF+ +   +++SW A
Sbjct: 66  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125

Query: 168 VIAGCVLH-EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +I       E +  A++LF +M S  I PN F+++S LKAC  +     G Q++   +K+
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            I S   VG  L+ MYA+ G M++AR  F ++ EKNL+++N ++ G+ +N    EA  LF
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             +   G+G    T +++L   AS  A+G  +Q+H   +K  ++S+  I N+LI  Y +C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G++E A ++F E    ++++ TSMIT +A+ G    AL+++ +M +    P+     ++L
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 407 NACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG- 464
           +AC+++    +G++    + K  G +        +V++  + G + +A    + +P    
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425

Query: 465 IVSWSAMIGGLAQHGR---GKEALQMFGQMLED 494
            + W  ++G    HG    G+ A +M  +   D
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 458



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 229/472 (48%), Gaps = 42/472 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC---GNFIDSRRLFDAIP 57
           VL ACT    L LG Q+H  V+  G   D  V  SLV MYAKC   G+  DSR++F+ +P
Sbjct: 57  VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 116

Query: 58  ERSVVSWNSLFSCYVH---CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL 114
           E +V+SW ++ + Y     CD  +EA+  F +M+   IRPN FS SS++ AC    D   
Sbjct: 117 EHNVMSWTAIITAYAQSGECD--KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 174

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G +++ Y++KLG  S     N+L+ MYA+ G +EDA   F  +   ++VS+NA++ G   
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +  ++ A  LF ++  + I  + FT+ S L   A +     G Q+H  L+K   KS+  +
Sbjct: 235 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 294

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY++CG+++ A  +F+ M ++N+I+W  +I+G  ++G    A  +F  M   G 
Sbjct: 295 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 354

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             ++ T   VL +         C  V  +S     E   +  NS+   +G    +E    
Sbjct: 355 KPNEITYVAVLSA---------CSHVGMIS-----EGQKHF-NSMYKEHGIVPRMEH--- 396

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                      AC  M+    + GL  EA++    M    +  D+ V  +LL AC     
Sbjct: 397 ----------YAC--MVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHGN 441

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            E G+     I++     D  A   L N++A  G   D  +    + +R ++
Sbjct: 442 TELGRHAAEMILE-QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 492


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/743 (37%), Positives = 442/743 (59%), Gaps = 9/743 (1%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  N ++  Y+  G+   ++ LF + P R+  +W  +   +       +A+  F+ M+  
Sbjct: 75  FSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGE 134

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+ P+  ++++++N    +  SL     H ++IK G D+ +F  N L+D Y K G L  A
Sbjct: 135 GVIPDRVTVTTVLNLPGCTVPSL-----HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 189

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF ++   D V++NA++ GC     +  AL+LF  M+ + I    FT++S L   AGM
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               LG Q+H  +++     +  V   L+D Y+KC  +D+ R +F  MPE++ +++N++I
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVKTA 328
           + +  N        LF  M  + +GFD+  L  +T+L    S   + + KQ+HA  V   
Sbjct: 310 AAYAWNQCAATVLRLFREM--QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG 367

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+D + N+LID Y KCG ++ A   F   S    ++ T++IT Y Q G  EEAL+L+ 
Sbjct: 368 LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 427

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M+   + PD    SS++ A ++L+    G+Q+H ++I+ G+ S  F+G+ LV+MYAKCG
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +D+A R F E+P+R  +SW+A+I   A +G  K A++MF  ML  G  P+ +T +SVL 
Sbjct: 488 CLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H GL  E   +F  M+ ++ I P +EHYAC+ID LGR G F +  +++  MPF+A+ 
Sbjct: 548 ACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADP 607

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            +W ++L + RI+ N E+ + AA+ LF +EP  ++ +V+LSNIYA AG W++ A V++ M
Sbjct: 608 IIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIM 667

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           +D  ++KE G SW+E+K K+Y+F   D +     EI  +LD +   ++K GY P +   L
Sbjct: 668 RDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCAL 727

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           H V+   K + L +HSE+LA+AF L+ TP G  IR+ KNL  C+DCH   + ISKIV+R+
Sbjct: 728 HMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRD 787

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD  RFHHF++G CSCG YW
Sbjct: 788 IIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 248/466 (53%), Gaps = 4/466 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H   +  G D+  FV N+L+  Y K G    +RR+F  + ++  V++N++         
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
             +A+  F  M  +GI    F+ SS++   AG    LLG ++H   ++     ++F  N+
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+D Y+K   L+D   +F ++   D VS+N +IA    ++     L+LF++M+    +  
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           +  Y + L     +    +G+Q+H  L+ + + S+ ++G  L+DMY+KCG +D A+  F 
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
              EK+ I+W  +I+G++QNG   EA  LF  M R G+  D+ T S+++K+ +S   IG+
Sbjct: 397 NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +Q+H+  +++ ++S  +  + L+D Y KCG +++A++ F E    + ++  ++I+AYA 
Sbjct: 457 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
           +G  + A+K++  M     NPDS    S+L AC++    ++  + + H++K  +    + 
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSISPWK 575

Query: 437 GN--SLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHG 479
            +   +++   + G      +   E+P +   + W++++     HG
Sbjct: 576 EHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHG 621



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 222/452 (49%), Gaps = 15/452 (3%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++FS N ++  Y+  G+L  A  +F    H +  +W  ++           AL LF+ M 
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              + P+  T T+ L    G  +      LH   IK  + +   V   L+D Y K G + 
Sbjct: 133 GEGVIPDRVTVTTVLN-LPGCTVPS----LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR +F  M +K+ + +N ++ G  + G   +A  LF  M R G+     T S++L   A
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               + +  QVHAL +++    + ++ NSL+D Y KC  ++D  ++F E    D V+   
Sbjct: 248 GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNV 307

Query: 370 MITAYAQFGLGEEALKLYLEMQ----DREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           +I AYA        L+L+ EMQ    DR++ P     +++L+   +L     GKQ+H  +
Sbjct: 308 IIAAYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQL 363

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +  G  S+   GN+L++MY+KCG +D A   FS   ++  +SW+A+I G  Q+G+ +EAL
Sbjct: 364 VLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           Q+F  M   G+ P+  T  S++ A +   ++   +    S   + G +      + ++D+
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR-QLHSYLIRSGYKSSVFSGSVLVDM 482

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             + G   EA+   D MP + N+  W A++ A
Sbjct: 483 YAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 218/470 (46%), Gaps = 44/470 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L        L LG QVH +V+ +    + FV NSL+  Y+KC    D RRLFD +PER 
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + + Y         +  F+EM   G        ++M++      D  +G++IH 
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             + LG  S+    NAL+DMY+K G L+ A + F +      +SW A+I G V +  ++ 
Sbjct: 362 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEE 421

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF  M+ + + P+  T++S +KA + + +  LGRQLH  LI+   KS    G  LVD
Sbjct: 422 ALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVD 481

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +DEA   F  MPE+N I+WN VIS +   G    A  +F  M   G   D  T
Sbjct: 482 MYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVT 541

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV---EDAVKIFK 357
             +VL + +                           N L D   K  H+   + ++  +K
Sbjct: 542 FLSVLAACSH--------------------------NGLADECMKYFHLMKHQYSISPWK 575

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E  A        +I    + G   +  K+ +EM       D  + +S+L++C      E 
Sbjct: 576 EHYAC-------VIDTLGRVGCFSQVQKMLVEM---PFKADPIIWTSILHSCRIHGNQEL 625

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
            +   V   K   M  T A   ++  N+YA+ G  +DA      + DRG+
Sbjct: 626 AR---VAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 41/296 (13%)

Query: 246 GSMDEARMIFHLMPEKNLIA-------------------------------WNIVISGHL 274
           G +  AR +F  MP KN+ +                               W I++  H 
Sbjct: 57  GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
             G   +A SLF  M  EGV  D+ T++TVL              +H  ++K   ++  +
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC-----TVPSLHPFAIKFGLDTHVF 171

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+L+DAY K G +  A ++F E    D V   +M+   ++ GL  +AL+L+  M+   
Sbjct: 172 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 231

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           I    F  SS+L   A ++    G QVH  +++   + + F  NSL++ Y+KC  +DD  
Sbjct: 232 IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMR 291

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG----VLPNHITLVSV 506
           R F E+P+R  VS++ +I   A +      L++F +M + G    VLP + T++SV
Sbjct: 292 RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP-YATMLSV 346



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 40/216 (18%)

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE----------------SSAVDLVAC- 367
           VKT F+   Y +N  + +    GH+  A  +F +                SS+ DL A  
Sbjct: 35  VKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 94

Query: 368 --------------TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN--ACAN 411
                         T M+ A+A  G   +AL L+  M    + PD    +++LN   C  
Sbjct: 95  HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV 154

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
            S       +H   IKFG  +  F  N+L++ Y K G +  A R F E+ D+  V+++AM
Sbjct: 155 PS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 207

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           + G ++ G   +ALQ+F  M   G+   H T  S+L
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/631 (43%), Positives = 407/631 (64%), Gaps = 14/631 (2%)

Query: 150 AVAVFKDIEHPDIVSWNAVIA-----GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           A  VF  +   ++V+W  +I      GC        A+ LF  M+ S   P+ FTY+S L
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARD-----AIDLFLDMELSGYVPDRFTYSSVL 63

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC---GSMDEARMIFHLMPEK 261
            AC  + L  LG+QLH  +I++ +  D  VG  LVDMYAKC   GS+D++R +F  MPE 
Sbjct: 64  SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 123

Query: 262 NLIAWNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           N+++W  +I+ + Q+G  D EA  LF  M    +  +  + S+VLK+  +       +QV
Sbjct: 124 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 183

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           ++ +VK    S + + NSLI  Y + G +EDA K F      +LV+  +++  YA+    
Sbjct: 184 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 243

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           EEA  L+ E+ D  I   +F  +SLL+  A++ A  +G+Q+H  ++K G+ S+    N+L
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++MY++CG+I+ A + F+E+ DR ++SW++MI G A+HG    AL+MF +MLE G  PN 
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           IT V+VL AC+H G+++E + HF SM K+ GI P  EHYACM+D+LGR+G   EAME ++
Sbjct: 364 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 423

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
           +MP  A+A VW  LLGA R++ N E+G+HAAEM+   EP+  + ++LLSN++ASAG W +
Sbjct: 424 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 483

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V K+R+ MK+  L KE G SWIEV+++V+ F VG+ SH ++ +IY +LD+++  + + GY
Sbjct: 484 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 543

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           +P  +  LHD+EE +KEQ L+ HSEK+AVAFGLI+T     IR+ KNLR+C DCHT+ ++
Sbjct: 544 IPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKY 603

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IS    REI+VRD NRFHH +NG CSC  YW
Sbjct: 604 ISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 249/453 (54%), Gaps = 9/453 (1%)

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
           ++FD +PER++V+W  + + +       +A+  F +M LSG  P+ F+ SS+++AC   G
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV---GNLEDAVAVFKDIEHPDIVSWNA 167
              LG+++H   I+LG   D+    +LVDMYAK    G+++D+  VF+ +   +++SW A
Sbjct: 71  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130

Query: 168 VIAGCVLH-EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +I       E +  A++LF +M S  I PN F+++S LKAC  +     G Q++   +K+
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            I S   VG  L+ MYA+ G M++AR  F ++ EKNL+++N ++ G+ +N    EA  LF
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             +   G+G    T +++L   AS  A+G  +Q+H   +K  ++S+  I N+LI  Y +C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G++E A ++F E    ++++ TSMIT +A+ G    AL+++ +M +    P+     ++L
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 407 NACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG- 464
           +AC+++    +G++    + K  G +        +V++  + G + +A    + +P    
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430

Query: 465 IVSWSAMIGGLAQHGR---GKEALQMFGQMLED 494
            + W  ++G    HG    G+ A +M  +   D
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 463



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 229/472 (48%), Gaps = 42/472 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC---GNFIDSRRLFDAIP 57
           VL ACT    L LG Q+H  V+  G   D  V  SLV MYAKC   G+  DSR++F+ +P
Sbjct: 62  VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121

Query: 58  ERSVVSWNSLFSCYVH---CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL 114
           E +V+SW ++ + Y     CD  +EA+  F +M+   IRPN FS SS++ AC    D   
Sbjct: 122 EHNVMSWTAIITAYAQSGECD--KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 179

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G +++ Y++KLG  S     N+L+ MYA+ G +EDA   F  +   ++VS+NA++ G   
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +  ++ A  LF ++  + I  + FT+ S L   A +     G Q+H  L+K   KS+  +
Sbjct: 240 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 299

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY++CG+++ A  +F+ M ++N+I+W  +I+G  ++G    A  +F  M   G 
Sbjct: 300 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 359

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             ++ T   VL +         C  V  +S     E   +  NS+   +G    +E    
Sbjct: 360 KPNEITYVAVLSA---------CSHVGMIS-----EGQKHF-NSMYKEHGIVPRMEH--- 401

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                      AC  M+    + GL  EA++    M    +  D+ V  +LL AC     
Sbjct: 402 ----------YAC--MVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHGN 446

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            E G+     I++     D  A   L N++A  G   D  +    + +R ++
Sbjct: 447 TELGRHAAEMILE-QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 497


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/743 (37%), Positives = 442/743 (59%), Gaps = 9/743 (1%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  N ++  Y+  G+   ++ LF + P R+  +W  +   +       +A+  F+ M+  
Sbjct: 75  FSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGE 134

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+ P+  ++++++N    +  SL     H ++IK G D+ +F  N L+D Y K G L  A
Sbjct: 135 GVIPDRVTVTTVLNLPGCTVPSL-----HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 189

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF ++   D V++NA++ GC     +  AL+LF  M+ + I    FT++S L   AGM
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               LG Q+H  +++     +  V   L+D Y+KC  +D+ R +F  MPE++ +++N++I
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVKTA 328
           + +  N        LF  M  + +GFD+  L  +T+L    S   + + KQ+HA  V   
Sbjct: 310 AAYAWNQCAATVLRLFREM--QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG 367

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+D + N+LID Y KCG ++ A   F   S    ++ T++IT Y Q G  EEAL+L+ 
Sbjct: 368 LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 427

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M+   + PD    SS++ A ++L+    G+Q+H ++I+ G+ S  F+G+ LV+MYAKCG
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +D+A R F E+P+R  +SW+A+I   A +G  K A++MF  ML  G  P+ +T +SVL 
Sbjct: 488 CLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H GL  E   +F  M+ ++ I P +EHYAC+ID LGR G F +  +++  MPF+A+ 
Sbjct: 548 ACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADP 607

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            +W ++L + RI+ N E+ + AA+ LF +EP  ++ +V+LSNIYA AG W++ A V++ M
Sbjct: 608 IIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIM 667

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           +D  ++KE G SW+E+K K+Y+F   D +     EI  +LD +   ++K GY P +   L
Sbjct: 668 RDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCAL 727

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           H V+   K + L +HSE+LA+AF L+ TP G  IR+ KNL  C+DCH   + ISKIV+R+
Sbjct: 728 HMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRD 787

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD  RFHHF++G CSCG YW
Sbjct: 788 IIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 248/466 (53%), Gaps = 4/466 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H   +  G D+  FV N+L+  Y K G    +RR+F  + ++  V++N++         
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
             +A+  F  M  +GI    F+ SS++   AG    LLG ++H   ++     ++F  N+
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+D Y+K   L+D   +F ++   D VS+N +IA    ++     L+LF++M+    +  
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           +  Y + L     +    +G+Q+H  L+ + + S+ ++G  L+DMY+KCG +D A+  F 
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
              EK+ I+W  +I+G++QNG   EA  LF  M R G+  D+ T S+++K+ +S   IG+
Sbjct: 397 NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +Q+H+  +++ ++S  +  + L+D Y KCG +++A++ F E    + ++  ++I+AYA 
Sbjct: 457 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
           +G  + A+K++  M     NPDS    S+L AC++    ++  + + H++K  +    + 
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSISPWK 575

Query: 437 GN--SLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHG 479
            +   +++   + G      +   E+P +   + W++++     HG
Sbjct: 576 EHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHG 621



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 222/452 (49%), Gaps = 15/452 (3%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++FS N ++  Y+  G+L  A  +F    H +  +W  ++           AL LF+ M 
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              + P+  T T+ L    G  +      LH   IK  + +   V   L+D Y K G + 
Sbjct: 133 GEGVIPDRVTVTTVLN-LPGCTVP----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR +F  M +K+ + +N ++ G  + G   +A  LF  M R G+     T S++L   A
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               + +  QVHAL +++    + ++ NSL+D Y KC  ++D  ++F E    D V+   
Sbjct: 248 GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNV 307

Query: 370 MITAYAQFGLGEEALKLYLEMQ----DREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           +I AYA        L+L+ EMQ    DR++ P     +++L+   +L     GKQ+H  +
Sbjct: 308 IIAAYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQL 363

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +  G  S+   GN+L++MY+KCG +D A   FS   ++  +SW+A+I G  Q+G+ +EAL
Sbjct: 364 VLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           Q+F  M   G+ P+  T  S++ A +   ++   +    S   + G +      + ++D+
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR-QLHSYLIRSGYKSSVFSGSVLVDM 482

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             + G   EA+   D MP + N+  W A++ A
Sbjct: 483 YAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 218/470 (46%), Gaps = 44/470 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L        L LG QVH +V+ +    + FV NSL+  Y+KC    D RRLFD +PER 
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + + Y         +  F+EM   G        ++M++      D  +G++IH 
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             + LG  S+    NAL+DMY+K G L+ A + F +      +SW A+I G V +  ++ 
Sbjct: 362 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEE 421

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF  M+ + + P+  T++S +KA + + +  LGRQLH  LI+   KS    G  LVD
Sbjct: 422 ALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVD 481

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +DEA   F  MPE+N I+WN VIS +   G    A  +F  M   G   D  T
Sbjct: 482 MYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVT 541

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV---EDAVKIFK 357
             +VL           C                   N L D   K  H+   + ++  +K
Sbjct: 542 FLSVL---------AACSH-----------------NGLADECMKYFHLMKHQYSISPWK 575

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E       AC  +I    + G   +  K+ +EM       D  + +S+L++C      E 
Sbjct: 576 EH-----YAC--VIDTLGRVGCFSQVQKMLVEM---PFKADPIIWTSILHSCRIHGNQEL 625

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
            +   V   K   M  T A   ++  N+YA+ G  +DA      + DRG+
Sbjct: 626 AR---VAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 41/296 (13%)

Query: 246 GSMDEARMIFHLMPEKNLIA-------------------------------WNIVISGHL 274
           G +  AR +F  MP KN+ +                               W I++  H 
Sbjct: 57  GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
             G   +A SLF  M  EGV  D+ T++TVL              +H  ++K   ++  +
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC-----TVPSLHPFAIKFGLDTHVF 171

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+L+DAY K G +  A ++F E    D V   +M+   ++ GL  +AL+L+  M+   
Sbjct: 172 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 231

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           I    F  SS+L   A ++    G QVH  +++   + + F  NSL++ Y+KC  +DD  
Sbjct: 232 IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMR 291

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG----VLPNHITLVSV 506
           R F E+P+R  VS++ +I   A +      L++F +M + G    VLP + T++SV
Sbjct: 292 RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP-YATMLSV 346



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 40/216 (18%)

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE----------------SSAVDLVAC- 367
           VKT F+   Y +N  + +    GH+  A  +F +                SS+ DL A  
Sbjct: 35  VKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 94

Query: 368 --------------TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN--ACAN 411
                         T M+ A+A  G   +AL L+  M    + PD    +++LN   C  
Sbjct: 95  HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV 154

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
            S       +H   IKFG  +  F  N+L++ Y K G +  A R F E+ D+  V+++AM
Sbjct: 155 PS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 207

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           + G ++ G   +ALQ+F  M   G+   H T  S+L
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/775 (37%), Positives = 456/775 (58%), Gaps = 6/775 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ +C    D+ LG Q+ G  +  G ++    ANSL+ M+  CG+  ++  +F+ + ER 
Sbjct: 166 VISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERD 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
            +SWNS+ S        EE+  +F  M L     N  +LS +++ C GS D L  G+ +H
Sbjct: 226 TISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSIC-GSVDYLKWGKGVH 284

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G ++K G +S++   N L+ +Y+  G  +DA  +F+ +   D++SWN+++A  V      
Sbjct: 285 GLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCL 344

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            ALK+F +M   +   N  T+TSAL AC   E    G+ LH  ++ + ++ + I+G  L+
Sbjct: 345 CALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLI 404

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV--GFD 297
             Y KC  M EA+ +F  MP+ + + WN +I G   N    EA + F  M REG   G D
Sbjct: 405 TFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLM-REGSTSGVD 463

Query: 298 QTTLSTVLKSVASFQ-AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             T+  +L S  + +  I     +HA +V T F+ D ++ +SLI  Y KCG +  +  IF
Sbjct: 464 YITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIF 523

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +          ++I A A++G GEEALKL + M+   I  D F  S+ L+  A+L+  E
Sbjct: 524 DQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLE 583

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G+Q+H   IK GF  D F  N+ ++MY KCG +DDA R   +  DR  +SW+ +I   A
Sbjct: 584 EGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISA 643

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           +HG+  +A + F  ML+ GV PNH++ V +L AC+H GLV E   ++ SM   +GIQP  
Sbjct: 644 RHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGI 703

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EH  CMID+LGR+G+  EA   +  MP   N  VW +LL + RIY+N+++G+ AA+ L  
Sbjct: 704 EHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLE 763

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P   S +VL SN++A+ G W++V  VR  M  +K++K+P  SW++ K  +  F +GD+
Sbjct: 764 LDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQ 823

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           +H + ++I  KL  +  ++ +AGYVP     L D +E +KE  ++ HSE++A+AFGLI  
Sbjct: 824 THPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINI 883

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P G+T+R+ KNLR+C DCH+ F+F+S ++ R+I++RD  RFHHF NG+CSC  YW
Sbjct: 884 PEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 277/553 (50%), Gaps = 19/553 (3%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY+K G    ++ +FD + ER+  SWN + S YV      EAV FF+++   GI+P+ F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 99  LSSMINACAGSGDSLL---GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           ++S++ AC  S  S++   G + HG++IK G   D+F   + V  YA  G + +A  +F 
Sbjct: 61  IASLVTACNKS--SIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
           ++   ++VSW +++     +      +  +++M+   I  N       + +C  +    L
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G QL    +K  +++       L+ M+  CG ++EA  IF+ M E++ I+WN +IS + Q
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N    E+   F WM       + TTLS +L    S   +   K VH L+VK   ES+  +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDR 393
            N+L+  Y   G  +DA  IF+     DL++  SM+  Y Q G    ALK++ EM    +
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           EIN  +F  +S L AC +   +  GK +H  ++  G   +   GN+L+  Y KC  + +A
Sbjct: 359 EINYVTF--TSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEA 416

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE---DGVLPNHITLVSVLCAC 510
            + F  +P    V+W+A+IGG A +    EA+  F  M E    GV  ++IT+V++L +C
Sbjct: 417 KKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSC 474

Query: 511 -NHAGLVAEA-KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
             H  L+      H  ++   F +   Q   + +I +  + G    +  + D + F+  +
Sbjct: 475 LTHEDLIKYGIPIHAHTVVTGFDLD--QHVQSSLITMYAKCGDLHSSSYIFDQLVFKT-S 531

Query: 569 SVWGALLGAARIY 581
           SVW A++ A   Y
Sbjct: 532 SVWNAIIAANARY 544



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 297/603 (49%), Gaps = 12/603 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G Q HG  +  G   D FV  S V  YA  G   +++++F+ +P+R+VVSW SL   Y  
Sbjct: 78  GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSD 137

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
               +E +  +K M   GI  NE +++ +I++C    D +LG ++ G+++K G ++ + +
Sbjct: 138 NGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSA 197

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           AN+L+ M+   G++ +A ++F ++   D +SWN++I+    +  ++ + + F  M+    
Sbjct: 198 ANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHE 257

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             N  T +  L  C  ++  + G+ +H   +K  ++S+  +   L+ +Y+  G   +A +
Sbjct: 258 EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAEL 317

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP---WMYREGVGFDQTTLSTVLKSVAS 310
           IF  MPE++LI+WN +++ ++Q+G  + A  +F    WM +E    +  T ++ L +   
Sbjct: 318 IFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE---INYVTFTSALAACLD 374

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
            +     K +H   V    + +  I N+LI  YGKC  + +A K+F+    +D V   ++
Sbjct: 375 PEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNAL 434

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINP-DSFVCSSLLNAC-ANLSAYEQGKQVHVHIIKF 428
           I  +A      EA+  +  M++   +  D     ++L +C  +    + G  +H H +  
Sbjct: 435 IGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVT 494

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           GF  D    +SL+ MYAKCG +  +   F ++  +    W+A+I   A++G G+EAL++ 
Sbjct: 495 GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLV 554

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
            +M   G+  +     + L       ++ E +        K G +         +D+ G+
Sbjct: 555 VRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ-QLHGSTIKLGFELDHFIINAAMDMYGK 613

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLG-AARIYKNVEVGQHAAEML-FAIEPEKSSTHV 606
            G+  +A+ ++   P   +   W  L+  +AR  +  +  +   +ML   ++P   S   
Sbjct: 614 CGELDDALRIL-PQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVC 672

Query: 607 LLS 609
           LLS
Sbjct: 673 LLS 675


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 300/779 (38%), Positives = 457/779 (58%), Gaps = 14/779 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PE 58
           +L +     DL LG  +H  ++ +   D+D  VANSL+ MY+KCG    +RR+FD +   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC-AGSGDSLLGRK 117
           R +VSW ++ SC        E++    EM+  G+RPN F+L +   AC       L G  
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 118 IHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           + G+ +K G+  +D+    AL+DM+A+ G+L  A  VF  +     V W  +I   V   
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
                ++LF  M      P+ ++ +S + AC  +    LG+QLH   +++ + SD  V  
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSC 285

Query: 237 GLVDMYAKCG---SMDEARMIFHLMPEKNLIAWNIVISGHLQNG-GDMEAASLFPWMYRE 292
           GLVDMYAK     SM+ AR +F  MP  N+++W  +ISG++Q+G  +    +LF  M  E
Sbjct: 286 GLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE 345

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  +  T S +LK+ A+       +Q+HA  +KT+    + + N+L+  Y + G +E+A
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEA 405

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            K F +    ++++    ++   +      +    +E  D  ++  +F  +SLL+A A++
Sbjct: 406 RKAFDQLYETNILS----MSPDVETERNNASCSSKIEGMDDGVS--TFTFASLLSAAASV 459

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
               +G+++H   +K GF SD    NSLV+MYA+CG ++DA RAF E+ D  ++SW+++I
Sbjct: 460 GLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSII 519

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            GLA+HG  K+AL MF  M+  GV PN +T ++VL AC+H GLV E K HF SM+K  G+
Sbjct: 520 SGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGL 579

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P  EHYAC++D+L R+G  +EA + ++ MP +A+A VW  LL A R Y N E+G+ AA 
Sbjct: 580 LPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAAN 639

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            +  +EP   + +VLLSN+YA AG+WD VA++R  M+D  L KE G+SW++V + ++ F 
Sbjct: 640 HVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFR 699

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD SH  + +IYAKL  +   +   GYVP     LHD+ E  KEQ L  HSEK+AVAFG
Sbjct: 700 AGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFG 759

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI T     +R+ KNLR+C DCH++ ++ISK   REII+RD NRFH  ++G CSCG YW
Sbjct: 760 LITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 246/484 (50%), Gaps = 16/484 (3%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDI- 157
           + ++ + A +GD  LGR +H   ++    D+D   AN+L+ MY+K G +E A  VF  + 
Sbjct: 44  AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL-- 215
              D+VSW A+ +    +     +L+L  +M    + PN FT  +A +AC   EL  L  
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G  L   L      +D  VG  L+DM+A+ G +  A+ +F  + E+  + W ++I+ ++Q
Sbjct: 164 GVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQ 223

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
            G   +   LF  M  +G   D  ++S+++ +     ++ + +Q+H+++++    SD  +
Sbjct: 224 AGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCV 283

Query: 336 VNSLIDAYGKCG---HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE-EALKLYLEMQ 391
              L+D Y K      +E A K+FK     ++++ T++I+ Y Q G+ E   + L+ EM 
Sbjct: 284 SCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREML 343

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +  I P+    S+LL ACANLS  + G+Q+H H++K         GN+LV+MYA+ G ++
Sbjct: 344 NESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCME 403

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           +A +AF ++ +  I+S S  +    +  R   +     + ++DGV  +  T  S+L A  
Sbjct: 404 EARKAFDQLYETNILSMSPDV----ETERNNASCSSKIEGMDDGV--STFTFASLLSAAA 457

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             GL+ + +    ++  K G +  Q     ++ +  R G  ++A    D M    N   W
Sbjct: 458 SVGLLTKGQ-KLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK-DHNVISW 515

Query: 572 GALL 575
            +++
Sbjct: 516 TSII 519


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/746 (37%), Positives = 450/746 (60%), Gaps = 9/746 (1%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG- 91
            N+++  + K G+   +R LFDA+P+R+VV+W  L   Y      +EA   F++M  S  
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141

Query: 92  -IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF--SANALVDMYAKVGNLE 148
              P+  + ++++  C  +       ++H +++KLG+D++ F   +N L+  Y +V  L+
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F++I   D V++N +I G         ++ LF +M+ S   P+ FT++  LKA  
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G+    LG+QLH   +      D  VG  ++D Y+K   + E RM+F  MPE + +++N+
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVK 326
           VIS + Q   D   ASL  +   + +GFD+     +T+L   A+  ++ + +Q+H  ++ 
Sbjct: 322 VISSYSQ--ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              +S  ++ NSL+D Y KC   E+A  IFK       V+ T++I+ Y Q GL    LKL
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + +M+   +  D    +++L A A+ ++   GKQ+H  II+ G + + F+G+ LV+MYAK
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CGSI DA + F E+PDR  VSW+A+I   A +G G+ A+  F +M+E G+ P+ ++++ V
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+H G V +   +F++M   +GI P ++HYACM+D+LGR G+F EA +L+D MPF+ 
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVR 625
           +  +W ++L A RI+KN  + + AAE LF++E  + ++ +V +SNIYA+AG W+ V  V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M++  +KK P  SW+EV  K++ F+  D++H    EI  K++E++  + + GY P   
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
           + + DV+E  K + L +HSE+LAVAF LI+TP G  I V KNLR C DCH + + ISKIV
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI VRD +RFHHF  G CSCG YW
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/556 (28%), Positives = 273/556 (49%), Gaps = 50/556 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL------FDAIPERSVVSWNSLFS 69
           QVH   V  GFD++ F+  S V++ + C    + RRL      F+ IPE+  V++N+L +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYC----EVRRLDLACVLFEEIPEKDSVTFNTLIT 223

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            Y       E++  F +M  SG +P++F+ S ++ A  G  D  LG+++H  S+  G+  
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D    N ++D Y+K   + +   +F ++   D VS+N VI+     +  + +L  F++M+
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
               +   F + + L   A +   ++GRQLHC  +     S   VG  LVDMYAKC   +
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           EA +IF  +P++  ++W  +ISG++Q G       LF  M    +  DQ+T +TVLK+ A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           SF ++ + KQ+HA  +++    + +  + L+D Y KCG ++DAV++F+E    + V+  +
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I+A+A  G GE A+  + +M +  + PDS     +L AC++    EQG +       F 
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY------FQ 577

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
            MS  +        YA                         M+  L ++GR  EA ++  
Sbjct: 578 AMSPIYGITPKKKHYA------------------------CMLDLLGRNGRFAEAEKLMD 613

Query: 490 QMLEDGVLPNHITLVSVLCACN---HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +M  +   P+ I   SVL AC    +  L   A     SMEK          Y  M +I 
Sbjct: 614 EMPFE---PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA----YVSMSNIY 666

Query: 547 GRAGKFQEAMELVDTM 562
             AG++++  ++   M
Sbjct: 667 AAAGEWEKVRDVKKAM 682



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 215/472 (45%), Gaps = 47/472 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKA     D  LG Q+H + V TGF  D  V N ++  Y+K    +++R LFD +PE  
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + S Y   D  E ++ FF+EM   G     F  ++M++  A      +GR++H 
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++    DS +   N+LVDMYAK    E+A  +FK +     VSW A+I+G V    +  
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKLF +M+ S +  +  T+ + LKA A      LG+QLH  +I+     +   G GLVD
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A  +F  MP++N ++WN +IS H  NG    A   F  M   G+  D  +
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +  VL                                    A   CG VE   + F+  S
Sbjct: 556 ILGVLT-----------------------------------ACSHCGFVEQGTEYFQAMS 580

Query: 361 AVDLV-------ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +  +       AC  M+    + G   EA KL  EM      PD  + SS+LNAC    
Sbjct: 581 PIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNACRIHK 635

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
                ++    +     + D  A  S+ N+YA  G  +        + +RGI
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 242/503 (48%), Gaps = 49/503 (9%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV-- 173
           R++    IK G+D+D   +N +V+   + G +  A  V+ ++ H + VS N +I+G V  
Sbjct: 33  RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92

Query: 174 -----------------------------LHEHNDWALKLFQQM--KSSEINPNMFTYTS 202
                                         + H D A KLF+QM   SS   P+  T+T+
Sbjct: 93  GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--LVDMYAKCGSMDEARMIFHLMPE 260
            L  C     +    Q+H   +K+   ++P + V   L+  Y +   +D A ++F  +PE
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K+ + +N +I+G+ ++G   E+  LF  M + G      T S VLK+V       + +Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           HALSV T F  D  + N ++D Y K   V +   +F E   +D V+   +I++Y+Q    
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E +L  + EMQ    +  +F  +++L+  ANLS+ + G+Q+H   +     S    GNSL
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MYAKC   ++A+  F  +P R  VSW+A+I G  Q G     L++F +M    +  + 
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452

Query: 501 ITLVSVLCACNHAG--LVAEAKHHF----ESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            T  +VL A       L+ +  H F     ++E  F         + ++D+  + G  ++
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS-------GSGLVDMYAKCGSIKD 505

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A+++ + MP   NA  W AL+ A
Sbjct: 506 AVQVFEEMP-DRNAVSWNALISA 527


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/764 (37%), Positives = 450/764 (58%), Gaps = 1/764 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ +C   KD  LG Q+ G VV +G +S   V NSL+ M    GN   +  +FD + ER 
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWNS+ + Y     +EE+   F  M       N  ++S++++          GR IHG
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K+G+DS +   N L+ MYA  G   +A  VFK +   D++SWN+++A  V    +  
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 328

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L   M SS  + N  T+TSAL AC   +  E GR LH  ++   +  + I+G  LV 
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K G M E+R +   MP ++++AWN +I G+ ++    +A + F  M  EGV  +  T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448

Query: 301 LSTVLKS-VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           + +VL + +     +   K +HA  V   FESD+++ NSLI  Y KCG +  +  +F   
Sbjct: 449 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +++   +M+ A A  G GEE LKL  +M+   ++ D F  S  L+A A L+  E+G+
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   +K GF  D+F  N+  +MY+KCG I +  +      +R + SW+ +I  L +HG
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +E    F +MLE G+ P H+T VS+L AC+H GLV +   +++ + + FG++P  EH 
Sbjct: 629 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 688

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C+ID+LGR+G+  EA   +  MP + N  VW +LL + +I+ N++ G+ AAE L  +EP
Sbjct: 689 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 748

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E  S +VL SN++A+ G W++V  VR+ M    +KK+   SW+++KDKV +F +GDR+H 
Sbjct: 749 EDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 808

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           ++ EIYAKL+++  L+ ++GYV      L D +E +KE  L++HSE+LA+A+ L++TP G
Sbjct: 809 QTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEG 868

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNG 763
           +T+R+ KNLRIC DCH+ ++F+S+++ R I++RD  RFHHF  G
Sbjct: 869 STVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 293/581 (50%), Gaps = 8/581 (1%)

Query: 1   VLKACTSKKDLFL-GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++ AC     +F  G+QVHG V  +G  SD +V+ +++ +Y   G    SR++F+ +P+R
Sbjct: 47  LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 106

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSW SL   Y      EE +  +K M   G+  NE S+S +I++C    D  LGR+I 
Sbjct: 107 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 166

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K G +S +   N+L+ M   +GN++ A  +F  +   D +SWN++ A    + H +
Sbjct: 167 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 226

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            + ++F  M+      N  T ++ L     ++ ++ GR +H  ++KM   S   V   L+
Sbjct: 227 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 286

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYA  G   EA ++F  MP K+LI+WN +++  + +G  ++A  L   M   G   +  
Sbjct: 287 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 346

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ++ L +  +       + +H L V +    +  I N+L+  YGK G + ++ ++  + 
Sbjct: 347 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 406

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYEQG 418
              D+VA  ++I  YA+    ++AL  +  M+   ++ +     S+L+AC       E+G
Sbjct: 407 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K +H +I+  GF SD    NSL+ MYAKCG +  +   F+ + +R I++W+AM+   A H
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+E L++  +M   GV  +  +    L A     ++ E +     +  K G +     
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLGFEHDSFI 585

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASV--WGALLGA 577
           +    D+  + G   E  E+V  +P   N S+  W  L+ A
Sbjct: 586 FNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISA 623



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 264/523 (50%), Gaps = 2/523 (0%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL- 114
           +P R+ VSWN++ S  V      E + FF++M   GI+P+ F ++S++ AC  SG     
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++HG+  K G  SD++ + A++ +Y   G +  +  VF+++   ++VSW +++ G   
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
               +  + +++ M+   +  N  + +  + +C  ++ + LGRQ+   ++K  ++S   V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ M    G++D A  IF  M E++ I+WN + + + QNG   E+  +F  M R   
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             + TT+ST+L  +         + +H L VK  F+S   + N+L+  Y   G   +A  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +FK+    DL++  S++ ++   G   +AL L   M     + +    +S L AC     
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
           +E+G+ +H  ++  G   +   GN+LV+MY K G + ++ R   ++P R +V+W+A+IGG
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A+     +AL  F  M  +GV  N+IT+VSVL AC   G + E      +     G + 
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +     +I +  + G    + +L + +    N   W A+L A
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 522


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 290/779 (37%), Positives = 446/779 (57%), Gaps = 17/779 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+   DL +G +VHG V+  GF+SD  V  SL+ MY +     D+ + FD +P R 
Sbjct: 106 VLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRD 165

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+S+   +V      E +  F +M+   + P+  ++ S+  AC+  G   LGR +HG
Sbjct: 166 VVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHG 225

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA-----GCVLH 175
           Y ++   +S+    N+L+ MY K+G+L  A  +F+++       W  +I+     GC   
Sbjct: 226 YVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQE 285

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP--- 232
                AL +F +M+  ++ PN  T    L ACA +   + GR +H  +I+  +  DP   
Sbjct: 286 -----ALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAM--DPELD 338

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +G  L+++YA  G++ +   +F  + EK +++WN +IS   +NG   EA  LF  M  +
Sbjct: 339 FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQ 398

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  +L++ L +  +     +  Q+H   +KT    +D++ N+LID Y KCG V  A
Sbjct: 399 GLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSA 457

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            K+F++     LV   SMI  ++Q G   EA+ L+ +M    +  D     S++ AC++L
Sbjct: 458 NKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHL 517

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              E+GK VH  +I +G   D++   +L +MY+KCG +  A   F  + +R IVSWS MI
Sbjct: 518 GYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G   HG+    + +F QML  G+ PN IT + +L AC+HAG V E K +F SM + FG+
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGV 636

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P  +H+ACM+D+L RAG    A +++ ++PF AN+S+WGALL   RI+K +++ +   +
Sbjct: 637 EPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEK 696

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            L  ++   +  + LLSNIYA  G WD   KVR  MK   L+K PG S IE+  K+Y F 
Sbjct: 697 NLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFG 756

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD SH+++K+IY  L+    L++   Y    +  +    +  KE  +  HSEKLA+AFG
Sbjct: 757 PGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFG 816

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +I T PG T+R+ KNLR+C DCH+  +  SKI  REII+RD+NRFH FRNGSCSC  YW
Sbjct: 817 IINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 175/581 (30%), Positives = 309/581 (53%), Gaps = 12/581 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + C +   L    Q+H  +  TG       +  L+  YA+ G F  S+R+FD  P+  
Sbjct: 7   LFRRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPD 63

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIH 119
              W  L  CYV   F EEAV  + EMV     + + F   S++ AC+G GD  +G K+H
Sbjct: 64  SFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVH 123

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  IK G++SD     +L+ MY ++  L+DA   F  +   D+V+W++++   V +    
Sbjct: 124 GRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQAS 183

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L +F QM S  + P+  T  S  +AC+ +    LGR +H  +++ EI+S+  +   L+
Sbjct: 184 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLI 243

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY K G +  A  +F  +P +    W  +IS + Q+G   EA ++F  M    +  +Q 
Sbjct: 244 VMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQV 303

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKE 358
           T+  VL + A    +   + VH   ++ A + + D++  +L++ Y   G++ D  K+F+ 
Sbjct: 304 TMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFET 363

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +++  ++I+ + + G  EEAL L+++MQ + + PDS+  +S L+AC  +S  + G
Sbjct: 364 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            Q+H +IIK G  +D F  N+L++MYAKCG +  A++ F +I ++ +V+W++MI G +Q+
Sbjct: 424 AQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQN 482

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQ 536
           G   EA+ +F QM  + V  + +T +SV+ AC+H G + + K  HH   M   +G++   
Sbjct: 483 GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIM---YGLRKDS 539

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                + D+  + G+ Q A  + D M  ++  S W  ++  
Sbjct: 540 YLDTALTDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAG 579


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 294/772 (38%), Positives = 452/772 (58%), Gaps = 1/772 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            V  +C   +D  LG QV G ++  GF+    VANSL+ M++   +  ++  +FD + E  
Sbjct: 953  VTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECD 1012

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++SWN++ S Y H     E++  F  M       N  +LSS+++ C+   +   GR IHG
Sbjct: 1013 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 1072

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +KLG DS++   N L+ +Y++ G  EDA  VF+ +   D++SWN+++A  V       
Sbjct: 1073 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 1132

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
             LK+  ++       N  T+ SAL AC+  E     + +H  +I        IVG  LV 
Sbjct: 1133 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 1192

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY K G M EA+ +   MP+ + + WN +I GH +N    EA   +  +  +G+  +  T
Sbjct: 1193 MYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYIT 1252

Query: 301  LSTVLKSV-ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + +VL +  A    +     +HA  V T FESDDY+ NSLI  Y KCG +  +  IF   
Sbjct: 1253 MVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGL 1312

Query: 360  SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                 +   +M+ A A  G GEEALK++ EM++  +N D F  S  L A ANL+  E+G+
Sbjct: 1313 GNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQ 1372

Query: 420  QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            Q+H  +IK GF SD    N+ ++MY KCG + D  +   +  +R  +SW+ +I   A+HG
Sbjct: 1373 QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHG 1432

Query: 480  RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              ++A + F +ML+ G  P+H+T VS+L ACNH GLV E   +++SM ++FG+ P  EH 
Sbjct: 1433 CFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHC 1492

Query: 540  ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             C+ID+LGR+G+   A   +  MP   N   W +LL A RI+ N+E+ +  AE L  ++P
Sbjct: 1493 VCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDP 1552

Query: 600  EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
               S +VL SN+ A++G W++V  +R+ M  N +KK+P  SW+++KDKV++F +G++ H 
Sbjct: 1553 SDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHP 1612

Query: 660  RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            ++  I AKL E+  +  +AGYVP     LHD++E +KE  L++HSE+LA+AFGLI TP  
Sbjct: 1613 QASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPES 1672

Query: 720  ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +T+R+ KNLR+C DCH+ ++F+S IV R+I++RD  RFHHF  G CSCG YW
Sbjct: 1673 STLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 195/556 (35%), Positives = 317/556 (57%), Gaps = 3/556 (0%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G  IH + I  G+ SD+     L+  Y KVG++  A  VF  +    +VSW A+++G   
Sbjct: 49  GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +   + A  LF  M+   +  N FTY SAL+AC  +   ++G Q+   + K     +  V
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 168

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              LVD ++KCG M++A  +F  M E+++++WN +I G+   G   ++  +F  M R G+
Sbjct: 169 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 228

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL +VL++ A    + +  Q+H +  +  + S D +   LI+AY K G +  A  
Sbjct: 229 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 288

Query: 355 IFKESSAVDLVACTSMITAYAQFGL-GEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           + K     DL + T++IT YA  G+   +AL L+ EM    I  D  +  S+LN CANL+
Sbjct: 289 LRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLA 348

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           ++  G Q+H   +K+    D   GN+L++MYAK G I+DA RAF E+ ++ ++SW+++I 
Sbjct: 349 SFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLIS 408

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G A+HG G  A+ ++ +M   G  PN +T +S+L AC+H GL AE    F +M  K+ I+
Sbjct: 409 GYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIK 468

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY+CM+D+  R G  +EA  L+  +  + NAS+WGA+LGA+ IY  + +G+ AA  
Sbjct: 469 PRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASN 528

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF ++PE S  +V+L++IY++AG+WD+  K+R+ M++   KK  G S+ +   K  +  +
Sbjct: 529 LFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK--SIPL 586

Query: 654 GDRSHARSKEIYAKLD 669
               H  S+  +  LD
Sbjct: 587 LQVQHGVSRRDFNILD 602



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 297/565 (52%), Gaps = 3/565 (0%)

Query: 14   GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
            G QVHG VV TG   D +V  +LV  Y   G   ++++LF+ +P+ +VVSW SL   Y  
Sbjct: 865  GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 924

Query: 74   CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                 E +  ++ M   G+  N+ + +++ ++C    D +LG ++ G+ I+ G++  +  
Sbjct: 925  SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 984

Query: 134  ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            AN+L+ M++   ++E+A  VF  +   DI+SWNA+I+    H     +L+ F  M+    
Sbjct: 985  ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 1044

Query: 194  NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
              N  T +S L  C+ ++  + GR +H  ++K+ + S+  +   L+ +Y++ G  ++A +
Sbjct: 1045 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 1104

Query: 254  IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            +F  M E++LI+WN +++ ++Q+G  ++   +   + + G   +  T ++ L + ++ + 
Sbjct: 1105 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 1164

Query: 314  IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
            +   K VHAL +   F     + N+L+  YGK G + +A K+ +     D V   ++I  
Sbjct: 1165 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 1224

Query: 374  YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYEQGKQVHVHIIKFGFMS 432
            +A+     EA+K Y  ++++ I  +     S+L AC A     + G  +H HI+  GF S
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 1284

Query: 433  DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
            D +  NSL+ MYAKCG ++ ++  F  + ++  ++W+AM+   A HG G+EAL++FG+M 
Sbjct: 1285 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 1344

Query: 493  EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
              GV  +  +    L A  +  ++ E +     +  K G +         +D+ G+ G+ 
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQ-QLHGLVIKLGFESDLHVTNAAMDMYGKCGEM 1403

Query: 553  QEAMELVDTMPFQANASVWGALLGA 577
             + ++++   P   +   W  L+ A
Sbjct: 1404 HDVLKML-PQPINRSRLSWNILISA 1427



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 267/511 (52%), Gaps = 1/511 (0%)

Query: 2    LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            LK  +       G  +H   +    +   F  N+L+ MY+K GN   +R +FD +  R+ 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 62   VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD-SLLGRKIHG 120
             SW+++ S YV     EEAV  F +M   G+ PN F ++S+I AC+ SG  +  G ++HG
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + +K G   D++   ALV  Y  +G + +A  +F+++   ++VSW +++ G     +   
Sbjct: 871  FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
             L ++Q+M+   ++ N  T+ +   +C  +E + LG Q+   +I+   +    V   L+ 
Sbjct: 931  VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 990

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            M++   S++EA  +F  M E ++I+WN +IS +  +G   E+   F WM       + TT
Sbjct: 991  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            LS++L   +S   +   + +H L VK   +S+  I N+L+  Y + G  EDA  +F+  +
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              DL++  SM+  Y Q G   + LK+  E+       +    +S L AC+N     + K 
Sbjct: 1111 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI 1170

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            VH  II  GF      GN+LV MY K G + +A +    +P    V+W+A+IGG A++  
Sbjct: 1171 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE 1230

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
              EA++ +  + E G+  N+IT+VSVL AC+
Sbjct: 1231 PNEAVKAYKLIREKGIPANYITMVSVLGACS 1261



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 278/536 (51%), Gaps = 12/536 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  KK    G  +H  ++  GF SD  +   L++ Y K G+ I +R +FD +PERS
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y      E+A   F +M   G++ N+F+  S + AC       +G ++ G
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K  +  ++F  +ALVD ++K G +EDA  +F  +   D+VSWNA+I G  +    D 
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +  +F+ M    + P+ +T  S L+A A      +  Q+H  + ++   S  IV   L++
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG-GDMEAASLFPWMYREGVGFDQT 299
            YAK GS+  A+ +   M +K+L +   +I+G+   G   ++A  LF  M +  +G D  
Sbjct: 276 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDV 335

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            L ++L   A+  +  +  Q+HA ++K     D  + N+LID Y K G +EDA + F E 
Sbjct: 336 ILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEM 395

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++++ TS+I+ YA+ G G  A+ LY +M+ +   P+     SLL AC++     +G 
Sbjct: 396 EEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGC 455

Query: 420 QVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQ 477
           +   +++ K+         + +V+++A+ G +++A     +I  +   S W A++G  + 
Sbjct: 456 ECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSI 515

Query: 478 HGR---GKEAL-QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           +G    GKEA   +F    E+ V  N++ L S+  A   AGL  +A    + ME++
Sbjct: 516 YGYMSLGKEAASNLFNMQPENSV--NYVVLASIYSA---AGLWDDAWKIRKLMEER 566



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 197/419 (47%), Gaps = 22/419 (5%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKL      + ++P++  Y   L+ C   + K+ G  +H  LI     SD  +   L+ 
Sbjct: 17  ALKLLSS-NPTRLDPSL--YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLII 73

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y K G +  AR +F  MPE+++++W  ++SG+ QNG   +A  LF  M   GV  +Q T
Sbjct: 74  FYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFT 133

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             + L++  S + + +  QV     K  F  + ++ ++L+D + KCG +EDA  +F    
Sbjct: 134 YGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMM 193

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+  +MI  YA  G  +++  ++  M    + PD +   S+L A A         Q
Sbjct: 194 ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQ 253

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG- 479
           +H  I + G+ S       L+N YAK GS+  A      +  + + S +A+I G A  G 
Sbjct: 254 IHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 313

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQE- 537
              +AL +F +M +  +  + + L S+L  C N A      + H  +++     QP  + 
Sbjct: 314 YSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK----YQPSYDV 369

Query: 538 -HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG----------AARIYKNVE 585
                +ID+  ++G+ ++A    D M  + N   W +L+           A  +YK +E
Sbjct: 370 AMGNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHGYGHMAVSLYKKME 427



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 142/277 (51%), Gaps = 9/277 (3%)

Query: 305  LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            LK  +   +    K +HA  +  +     +  N+LI+ Y K G++E A  +F E    + 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 365  VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY--EQGKQVH 422
             + ++M++ Y + GL EEA+ L+ +M    + P+ F+ +SL+ AC+  S Y  ++G QVH
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSR-SGYMADEGFQVH 869

Query: 423  VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
              ++K G + D + G +LV+ Y   G + +A + F E+PD  +VSW++++ G +  G   
Sbjct: 870  GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPG 929

Query: 483  EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK--KFGIQPMQEHYA 540
            E L ++ +M ++GV  N  T  +V  +C   GL+ +    ++ +    ++G +       
Sbjct: 930  EVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVAN 986

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             +I +       +EA  + D M  + +   W A++ A
Sbjct: 987  SLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISA 1022


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/777 (36%), Positives = 450/777 (57%), Gaps = 8/777 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    DL LG  +HG+       SD FV N+L+ MY KCG   ++ ++F+ +PER+
Sbjct: 107 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERN 166

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +VSWNS+   +    FL+E+   F+EM++      P+  +L +++  CAG  D   G  +
Sbjct: 167 LVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAV 226

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG ++KLG + ++   N+L+DMY+K   L +A  +F   +  +IVSWN++I G    E  
Sbjct: 227 HGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDV 286

Query: 179 DWALKLFQQMKS--SEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIV 234
                L Q+M++  +++  + FT  + L  C  +E  EL   ++LH    +  ++S+ +V
Sbjct: 287 CRTFYLLQKMQTEDAKMKADEFTILNVLPVC--LERSELQSLKELHGYSWRHGLQSNELV 344

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               +  Y +CG++  +  +F LM  K + +WN ++ G+ QN    +A  L+  M   G+
Sbjct: 345 ANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGL 404

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T+ ++L + +  +++   +++H  +++     D +I  SL+  Y  CG    A  
Sbjct: 405 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV 464

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F       LV+   MI  Y+Q GL +EA+ L+ +M    I P       +  AC+ LSA
Sbjct: 465 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 524

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              GK++H   +K     D F  +S+++MYAK G I  + R F  + ++ + SW+ +I G
Sbjct: 525 LRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAG 584

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HGRGKEAL++F +ML  G+ P+  T   +L AC+HAGLV +   +F  M     I+P
Sbjct: 585 YGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEP 644

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHY C++D+LGRAG+  +A+ L++ MP   ++ +W +LL + RI+ N+ +G+  A  L
Sbjct: 645 KLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKL 704

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             +EPEK   +VL+SN++A +G WD+V +VR  MKD  L+K+ G SWIEV  KV+ F +G
Sbjct: 705 LELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIG 764

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D      +E+      +   ++  GY P   + LHD+EE +K  +L  HSEKLA++FGL+
Sbjct: 765 DEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLL 824

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T  G  +RV KNLRIC DCH + +FISK+V+R+I+VRD  RFHHFR+G CSCG YW
Sbjct: 825 NTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 165/518 (31%), Positives = 286/518 (55%), Gaps = 6/518 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANS-LVVMYAKCGNFIDSRRLFDAIPER 59
           +L+AC  +KD+ +G ++H +V  +    ++FV N+ ++ MY+ CG+  DSR +FD +  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN++ S Y   +  E+A+  F E++ ++  +P+ F+L  +I ACAG  D  LG+ I
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG + K+   SD+F  NAL+ MY K G +E+AV VF+ +   ++VSWN++I G   +   
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 179 DWALKLFQQMKSSEIN--PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             +   F++M   E +  P++ T  + L  CAG E  E G  +H   +K+ +  + +V  
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+DMY+KC  + EA+++F    +KN+++WN +I G+ +         L   M  E    
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303

Query: 297 --DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T+  VL        +   K++H  S +   +S++ + N+ I AY +CG +  + +
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F       + +  +++  YAQ     +AL LYL+M D  ++PD F   SLL AC+ + +
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              G+++H   ++ G   D F G SL+++Y  CG    A   F  +  R +VSW+ MI G
Sbjct: 424 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 483

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
            +Q+G   EA+ +F QML DG+ P  I ++ V  AC+ 
Sbjct: 484 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 295/777 (37%), Positives = 450/777 (57%), Gaps = 9/777 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR-RLFDAIPER 59
           V+KACT   D  LG  +HG+V+  G   D FV N+L+ MY K G F+D+  ++F  +P R
Sbjct: 37  VIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFG-FVDAAVKVFHYMPVR 95

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLGRK 117
           ++VSWNS+ S +    F ++      EM+    G+ P+  +L +++  CA   D  +G +
Sbjct: 96  NLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR 155

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IHG ++KLG   D+   N+LVDMY+K G L +A  +F      + VSWN +I G     +
Sbjct: 156 IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGY 215

Query: 178 NDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIV 234
              A  LF++M+  E I  N  T  + L AC  +E+ +L   ++LH   I+   + D +V
Sbjct: 216 IFEAFNLFREMQMQEDIEVNEVTVLNILPAC--LEISQLRSLKELHGYSIRHGFQYDELV 273

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             G V  YAKCG +  A  +F+ M  K + +WN +I G  QNG   +A +L+  M   G+
Sbjct: 274 ANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGL 333

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T+ ++L + A  +++   K+VH   ++   E D +I  SL+  Y  CG    A  
Sbjct: 334 VPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARL 393

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F        V+  +MI+ Y+Q GL E+AL L+ ++      P      S+L AC+  SA
Sbjct: 394 LFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSA 453

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              GK+ H + +K   M D F   S ++MYAK G I ++   F  + ++ + SW+A+I  
Sbjct: 454 LRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAA 513

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG G+E++++F +M + G +P+  T + +L  C+HAGLV E   +F  M+   GI+P
Sbjct: 514 YGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEP 573

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHYAC++D+LGRAG+  +A+ LV  MP Q ++ VW +LL   R +  +E+GQ  AE L
Sbjct: 574 KLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKL 633

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             +EP+    +V LSN+YA +G WD+V +VR+ +KD  L+K+ G SWIE+  KV++F  G
Sbjct: 634 LELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAG 693

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D    +SKE+     ++   + K GY P     LHDV+E +K + L  HSEKLA+ FGL+
Sbjct: 694 DNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLL 753

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T  G T+R+ KNLRICVDCH + +F+S++  REII+RD  RFHHF++G CSCG YW
Sbjct: 754 NTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 267/507 (52%), Gaps = 7/507 (1%)

Query: 83  FFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA 142
           F K +  +    + F+   +I AC GS D  LG  IHG  IK+G   D+F  NAL+ MY 
Sbjct: 18  FVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYG 77

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE--INPNMFTY 200
           K G ++ AV VF  +   ++VSWN++I+G   +  +     +  +M + E  + P++ T 
Sbjct: 78  KFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATL 137

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + L  CA     ++G ++H   +K+ +  D  V   LVDMY+KCG + EA+M+F     
Sbjct: 138 VTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNR 197

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           KN ++WN +I G    G   EA +LF  M  +E +  ++ T+  +L +      +   K+
Sbjct: 198 KNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKE 257

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H  S++  F+ D+ + N  + AY KCG +  A ++F       + +  ++I   AQ G 
Sbjct: 258 LHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGD 317

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
             +AL LY++M    + PD F   SLL A A+L +   GK+VH  +++ G   D+F G S
Sbjct: 318 PRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGIS 377

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L+++Y  CG    A   F  + ++  VSW+AMI G +Q+G  ++AL +F +++ DG  P+
Sbjct: 378 LLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPS 437

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-MIDILGRAGKFQEAMEL 558
            I +VSVL AC+    +   K       K   ++ +    AC  ID+  ++G  +E+  +
Sbjct: 438 DIAVVSVLGACSQQSALRLGKETHCYALKALLMEDV--FVACSTIDMYAKSGCIKESRSV 495

Query: 559 VDTMPFQANASVWGALLGAARIYKNVE 585
            D +  +  AS W A++ A  ++ + E
Sbjct: 496 FDGLKNKDLAS-WNAIIAAYGVHGDGE 521



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 207/406 (50%), Gaps = 20/406 (4%)

Query: 181 ALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A+ +F ++   +E N + FT+   +KAC G   + LG  +H  +IKM +  D  VG  L+
Sbjct: 14  AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY--REGVGFD 297
            MY K G +D A  +FH MP +NL++WN +ISG  +NG   +   +   M    EG+  D
Sbjct: 74  AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             TL TVL   A    + +  ++H L+VK     D  + NSL+D Y KCG++ +A  +F 
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD 193

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYE 416
           +++  + V+  +MI      G   EA  L+ EMQ +E I  +     ++L AC  +S   
Sbjct: 194 KNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
             K++H + I+ GF  D    N  V  YAKCG +  A+R F  +  + + SW+A+IGG A
Sbjct: 254 SLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCA 313

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-------HHFESMEKK 529
           Q+G  ++AL ++ QM   G++P+  T+ S+L A  H   +   K        H   ++  
Sbjct: 314 QNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSF 373

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            GI  +  +  C        G+   A  L D M  +++ S W A++
Sbjct: 374 IGISLLSLYIHC--------GESSSARLLFDGMEEKSSVS-WNAMI 410


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 287/772 (37%), Positives = 446/772 (57%), Gaps = 2/772 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
            +L+ C   K L  G  VH ++   G   +  +   LV MY  CG   + RR+FD I  + 
Sbjct: 457  ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 516

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V  WN + S Y       E++  FK+M   GI  N ++ S ++   A  G     ++IH
Sbjct: 517  KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 576

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            G   KLG+ S     N+L+  Y K G ++ A  +F ++   D+VSWN++I+GCV++  + 
Sbjct: 577  GCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSH 636

Query: 180  WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             AL+ F QM    +  ++ T  +++ ACA +    LGR LH   +K     + +    L+
Sbjct: 637  SALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLL 696

Query: 240  DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            DMY+KCG++++A   F  M +K +++W  +I+ +++ G   +A  LF  M  +GV  D  
Sbjct: 697  DMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVY 756

Query: 300  TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            ++++VL + A   ++   + VH    K        + N+L+D Y KCG +E+A  +F + 
Sbjct: 757  SMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQI 816

Query: 360  SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               D+V+  +MI  Y++  L  EALKL+ EMQ +E  PD    + LL AC +L+A E G+
Sbjct: 817  PVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ-KESRPDGITMACLLPACGSLAALEIGR 875

Query: 420  QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
             +H  I++ G+ S+    N+L++MY KCGS+  A   F  IP++ +++W+ MI G   HG
Sbjct: 876  GIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHG 935

Query: 480  RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             G EA+  F +M   G+ P+ IT  S+L AC+H+GL+ E    F SM  +  ++P  EHY
Sbjct: 936  LGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHY 995

Query: 540  ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            ACM+D+L R G   +A  L++TMP + +A++WGALL   RI+ +VE+ +  AE +F +EP
Sbjct: 996  ACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEP 1055

Query: 600  EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
            + +  +VLL+NIYA A  W+ V K+R  +    LKK PG SWIEV+ K  TF   D +H 
Sbjct: 1056 DNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHP 1115

Query: 660  RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            ++K I++ L+ +   +   G+ P +   L +  + EKE  L  HSEKLA+AFG++  P G
Sbjct: 1116 QAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSG 1175

Query: 720  ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             TIRV KNLR+C DCH   +F+SK   REII+RD NRFHHF++G CSC  +W
Sbjct: 1176 RTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 237/465 (50%), Gaps = 3/465 (0%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           SS++  CA       G+ +H      G   +      LV MY   G L +   +F  I  
Sbjct: 455 SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILS 514

Query: 160 PD-IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            + +  WN +++          ++ LF++M+   I  N +T++  LK  A +      ++
Sbjct: 515 DNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKR 574

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  + K+   S   V   L+  Y K G +D A  +F  + ++++++WN +ISG + NG 
Sbjct: 575 IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
              A   F  M    VG D  TL   + + A+  ++ + + +H   VK  F  +    N+
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT 694

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D Y KCG++ DA++ F++     +V+ TS+I AY + GL ++A++L+ EM+ + ++PD
Sbjct: 695 LLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPD 754

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            +  +S+L+ACA  ++ ++G+ VH +I K          N+L++MYAKCGS+++A   FS
Sbjct: 755 VYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFS 814

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           +IP + IVSW+ MIGG +++    EAL++F +M ++   P+ IT+  +L AC     + E
Sbjct: 815 QIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAAL-E 872

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
                     + G          +ID+  + G    A  L D +P
Sbjct: 873 IGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIP 917



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 224/439 (51%), Gaps = 12/439 (2%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L +  + SE++ N   Y+S L+ CA  +  + G+ +H  +    I  + ++G  LV 
Sbjct: 437 AVELLRMSQKSELDLN--AYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVF 494

Query: 241 MYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MY  CG++ E R IF H++ +  +  WN+++S + + G   E+  LF  M + G+  +  
Sbjct: 495 MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S +LK  A+   +G CK++H    K  F S + +VNSLI  Y K G V+ A K+F E 
Sbjct: 555 TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+  SMI+     G    AL+ +++M    +  D     + + ACAN+ +   G+
Sbjct: 615 GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 674

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H   +K  F  +    N+L++MY+KCG+++DA +AF ++  + +VSW+++I    + G
Sbjct: 675 ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREG 734

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
              +A+++F +M   GV P+  ++ SVL  CAC ++       H++          P+  
Sbjct: 735 LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN 794

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
               ++D+  + G  +EA  +   +P +   S W  ++G    Y    +   A ++   +
Sbjct: 795 ---ALMDMYAKCGSMEEAYLVFSQIPVKDIVS-WNTMIGG---YSKNSLPNEALKLFAEM 847

Query: 598 EPEKSSTHVLLSNIYASAG 616
           + E     + ++ +  + G
Sbjct: 848 QKESRPDGITMACLLPACG 866



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 23/276 (8%)

Query: 297 DQTTLSTVLKSVASFQAIGVCK----QVHALSVKTAF-----ESDDYIVNSLIDAYGKCG 347
           D+T L T+ KS+ +F     C     + +    +  F      S  Y ++S +D      
Sbjct: 352 DRTMLLTMAKSITNFGTYSTCNCHTSEANYAKPRNCFIFFQQPSRKYFLSSYLDVPRSST 411

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            V    K+ + +           I  + + G    A++L    Q  E++ +++  SS+L 
Sbjct: 412 RVGAFAKLDENTK----------ICKFCEVGDLRNAVELLRMSQKSELDLNAY--SSILQ 459

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIV 466
            CA     ++GK VH  I   G   +   G  LV MY  CG++ +  R F  I  D  + 
Sbjct: 460 LCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVF 519

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
            W+ M+   A+ G  +E++ +F +M + G+  N  T   +L      G V E K      
Sbjct: 520 LWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECK-RIHGC 578

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
             K G          +I    ++G+   A +L D +
Sbjct: 579 VYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/779 (37%), Positives = 450/779 (57%), Gaps = 17/779 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC    DL  G  +H  +V +G +    +AN L+ +Y  CG    +  LF+ + ER 
Sbjct: 134 VLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERD 192

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN+  +       L+ A+  F+ M L G+RP   +L   ++ CA    +   R IH 
Sbjct: 193 LVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQA---RAIHS 249

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              + G +  +  + AL   YA++G+L+ A  VF      D+VSWNA++     H H   
Sbjct: 250 IVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSE 309

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF +M    I P+  T  +A   C+ +     GR +H   ++  +  D ++G  L+D
Sbjct: 310 AALLFARMLHEGIPPSKVTLVNASTGCSSLRF---GRMIHACALEKGLDRDIVLGNALLD 366

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY +CGS +EAR +F  +P  N ++WN +I+G  Q G    A  LF  M  EG+   + T
Sbjct: 367 MYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRAT 425

Query: 301 LSTVLKSVAS----FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              +L++VAS     +A+   +++H+  V   + S+  I  +++  Y  CG +++A   F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485

Query: 357 KESSAVD---LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           +  +  D   +V+  ++I++ +Q G G+ AL  +  M    + P+   C ++L+ACA  +
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
           A  +G  VH H+   G  S+ F   +L +MY +CGS++ A   F ++  +R +V ++AMI
Sbjct: 546 ALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
              +Q+G   EAL++F +M ++G  P+  + VSVL AC+H GL  E    F SM + +GI
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P ++HYAC +D+LGRAG   +A EL+  M  +    VW  LLGA R Y++V+ G+ A  
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
           M+  ++P   S +V+LSNI A AG WD  A+VR  M+   L+K+ G SWIE+K +V+ F 
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFV 785

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GDRSH RS+EIY +L+ +   + + GYVP     L  V+E+EKE+LL  HSE+LA+A G
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALG 845

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++++    T+RV KNLR+C DCH + +FISKIV++EI+VRD +RFHHF +GSCSCG YW
Sbjct: 846 VMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 175/609 (28%), Positives = 305/609 (50%), Gaps = 21/609 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+A    + L  G ++H  +V  G +  E + N L+ +Y KC +  D   +F  +  R 
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SW ++ + Y      + A+  F  M   G+R +  +  +++ ACA  GD   GR IH 
Sbjct: 93  EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + ++ G +     AN L+ +Y   G +  A+ +F+ +E  D+VSWNA IA        D 
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMER-DLVSWNAAIAANAQSGDLDM 211

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ+M+   + P   T    L  CA +      R +H  + +  ++   +V   L  
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVSTALAS 268

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YA+ G +D+A+ +F    E+++++WN ++  + Q+G   EAA LF  M  EG+   + T
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT 328

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L       +S +     + +HA +++   + D  + N+L+D Y +CG  E+A  +F E  
Sbjct: 329 LVNASTGCSSLR---FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF-EGI 384

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN----LSAYE 416
             + V+  +MI   +Q G  + AL+L+  MQ   + P      +LL A A+      A  
Sbjct: 385 PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMA 444

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE--IPDR-GIVSWSAMIG 473
           +G+++H  I+  G+ S+   G ++V MYA CG+ID+A  +F    + DR  +VSW+A+I 
Sbjct: 445 EGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIIS 504

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            L+QHG GK AL  F +M   GV PN IT V+VL AC  A  + E     + + +  G++
Sbjct: 505 SLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHL-RHSGME 563

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
                   +  + GR G  + A E+ + +  + +  ++ A++ A   Y    +   A ++
Sbjct: 564 SNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA---YSQNGLAGEALKL 620

Query: 594 LFAIEPEKS 602
            + ++ E S
Sbjct: 621 FWRMQQEGS 629



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 8/277 (2%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L  +L++    + +   +++HA  V    E +  + N L+  Y KC  + D  ++F    
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D  + T++ITAY + G  + A+ ++  MQ   +  D+    ++L ACA L    QG+ 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I++ G    +   N L+++Y  CG +  A   F  + +R +VSW+A I   AQ G 
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
              AL++F +M  +GV P  ITLV  L  C     + +A+    S+ ++ G++       
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQAR-AIHSIVRESGLEQTLVVST 264

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +     R G   +A E+ D    + +   W A+LGA
Sbjct: 265 ALASAYARLGHLDQAKEVFDRAA-ERDVVSWNAMLGA 300


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 295/756 (39%), Positives = 448/756 (59%), Gaps = 9/756 (1%)

Query: 24   TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
            +GF  D +V ++LV  +AK G+   ++ +F  +  R+VVS N L    V     EEAV  
Sbjct: 313  SGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVEL 372

Query: 84   FKEMVLS-GIRPNEFS--LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVD 139
            F EM  S  + PN +   L++             G ++H + I+ G  ++ +   N L++
Sbjct: 373  FMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLIN 432

Query: 140  MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
            MYAK G + DA  VF+ +++ D V+WN++I G   ++    A+K FQ+M+ +E+ P+ FT
Sbjct: 433  MYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFT 492

Query: 200  YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
              SAL +CA +    +G QLHC  +K+ +  D  V   L+ +Y +CG + E +  F LM 
Sbjct: 493  MISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552

Query: 260  EKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            + + ++WN +I     +   M EA   F  M R G   ++ T  T+L +V+S     + K
Sbjct: 553  DYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGK 612

Query: 319  QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQF 377
            Q+HAL +K    +D  I N+L+  YGKCG +     IF + S   D V+  SMI+ Y   
Sbjct: 613  QIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHN 672

Query: 378  GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
             L  +A+ +   M  +    D F  +++L+ACA ++  E+G +VH   ++    SD   G
Sbjct: 673  ELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIG 732

Query: 438  NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            ++LV+MYAKCG ID A R F  +P R + SW++MI G A+HG G ++L +F QM   G L
Sbjct: 733  SALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPL 792

Query: 498  PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            P+H+T V VL AC+HAGLV E   HF+SM + +G+ P  EH++CM+D+LGR G+  +  +
Sbjct: 793  PDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMED 852

Query: 558  LVDTMPFQANASVWGALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
             ++ MP + N  +W  +LGA      +N  +G+ AAEML  +EP  +  ++LLSN+YAS 
Sbjct: 853  FLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASG 912

Query: 616  GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            G WD+VAK R  M+   +KKE G SW+ +KD V+ F  GD+SH     IY KL E++  +
Sbjct: 913  GKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKM 972

Query: 676  NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
              AGY+P     L+D+E   KE+LL +HSEK+AVAF ++  P    IR+ KNLR+C DCH
Sbjct: 973  RLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCH 1031

Query: 736  TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ++F++IS+IV R+I++RD NRFHHF NG CSCG +W
Sbjct: 1032 SAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 166/530 (31%), Positives = 266/530 (50%), Gaps = 26/530 (4%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           +C SK    L LQ+       GF +D F+ N+L+ +YA+ G+    R++FD +P R++VS
Sbjct: 86  SCGSKDAEELHLQLFK----NGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL--GRKIHGY 121
           W+ L S Y       EA   F++MV  G  PN ++  S+I AC   G+  L  G +IHG 
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGL 201

Query: 122 SIKLGYDSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             K  Y +D+ ++N L+ MY   +G ++ A   F  I   ++VS N++I+          
Sbjct: 202 MSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261

Query: 181 ALKLFQQMKSS----EINPNMFTYTSALKAC-----AGMELKELGRQLHCSLIKMEIKSD 231
           A  +F  M+       + PN +T+ S + A      +G+ L E   QL   + K     D
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLE---QLLTRVEKSGFLHD 318

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             VG  LV  +AK GS+  A+ IF  M  +N+++ N +I G ++     EA  LF  M +
Sbjct: 319 LYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-K 377

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCK----QVHALSVKTA-FESDDYIVNSLIDAYGKC 346
           + V  +  +   +L +   F  +   K    +VHA  +++    +   I N LI+ Y KC
Sbjct: 378 DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G + DA  +F+     D V   SMIT   Q     EA+K + EM+  E+ P +F   S L
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISAL 497

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
           ++CA+L     G+Q+H   +K G   D    N+L+ +Y +CG + +  +AFS + D   V
Sbjct: 498 SSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHV 557

Query: 467 SWSAMIGGLAQHGRGK-EALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
           SW+++IG LA       EA++ F  M+  G  PN +T +++L A +   L
Sbjct: 558 SWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSL 607



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 213/461 (46%), Gaps = 42/461 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C S   + +G Q+H   +  G D D  V+N+L+ +Y +CG   + ++ F  + +   
Sbjct: 497 LSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDH 556

Query: 62  VSWNSLFSCYVHCD-FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSWNSL       +  + EAV  F  M+ +G  PN  +  +++ A +      LG++IH 
Sbjct: 557 VSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHA 616

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHND 179
             +K    +D    NAL+  Y K G++     +F  + +  D VSWN++I+G + +E   
Sbjct: 617 LVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLP 676

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ +   M       + FT+ + L ACA +   E G ++H   ++  ++SD ++G  LV
Sbjct: 677 KAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALV 736

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG +D A   F +MP +NL +WN +ISG+ ++G   ++  LF  M  +G   D  
Sbjct: 737 DMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHV 796

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL + +           HA  V   F   D    S+ + YG    +E        S
Sbjct: 797 TFVGVLSACS-----------HAGLVNEGFSHFD----SMSEIYGLAPRMEHF------S 835

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYEQ 417
             VDL+     +     F            +    + P+  +  ++L AC  AN      
Sbjct: 836 CMVDLLGRVGELNKMEDF------------LNQMPVKPNVLIWRTVLGACCRANGRNTAL 883

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRA 456
           G++    +++   M  T A N ++  NMYA  G  DD  + 
Sbjct: 884 GRRAAEMLLE---MEPTNAVNYILLSNMYASGGKWDDVAKT 921



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 15/279 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A +S     LG Q+H +V+     +D  + N+L+  Y KCG+      +F  + +R 
Sbjct: 598 ILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQ 657

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSWNS+ S Y+H + L +A+     M+  G R + F+ +++++ACA       G ++H
Sbjct: 658 DEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVH 717

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G S++   +SD+   +ALVDMYAK G ++ A   F+ +   ++ SWN++I+G   H H  
Sbjct: 718 GCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGT 777

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG-------RQLHCSLIKMEIKSDP 232
            +L LF QMK     P+  T+   L AC+   L   G        +++    +ME  S  
Sbjct: 778 KSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFS-- 835

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVI 270
                +VD+  + G +++     + MP K N++ W  V+
Sbjct: 836 ----CMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVL 870



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 18/192 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L  G++VHG  V    +SD  + ++LV MYAKCG    + R F+ +P R+
Sbjct: 700 VLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARN 759

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---------D 111
           + SWNS+ S Y       +++  F +M L G  P+  +   +++AC+ +G         D
Sbjct: 760 LYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFD 819

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIA 170
           S+   +I+G + ++ + S M      VD+  +VG L         +   P+++ W  V+ 
Sbjct: 820 SM--SEIYGLAPRMEHFSCM------VDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLG 871

Query: 171 GCVLHEHNDWAL 182
            C      + AL
Sbjct: 872 ACCRANGRNTAL 883


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 279/772 (36%), Positives = 447/772 (57%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K L  G +V   +   GF  D  + + L +MY  CG+  ++ R+FD +    
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WN L +          ++  FK+M+ SG+  + ++ S +  + +       G ++HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHG 219

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K G+       N+LV  Y K   ++ A  VF ++   D++SWN++I G V +   + 
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F QM  S I  ++ T  S    CA   L  LGR +HC  +K     +      L+D
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG +D A+++F  M  ++++++  +I+G+ + G   EA  LF  M  EG+  D  T
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++ VL   A  + +   K+VH    +     D ++ N+L+D Y KCG + +A  +F E  
Sbjct: 400 VTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
             D+++  ++I  Y++     EAL L+ L + ++  +PD    + +L ACA+LSA+++G+
Sbjct: 460 VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGR 519

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H +I++ G+ SD    NSLV+MYAKCG++  A   F +I  + +VSW+ MI G   HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHG 579

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GKEA+ +F QM + G+ P+ I+ VS+L AC+H+GLV E    F  M  +  I+P  EHY
Sbjct: 580 FGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+L R G   +A   ++ MP   +A++WGALL   RI+ +V++ +  AE +F +EP
Sbjct: 640 ACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEP 699

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E +  +VL++NIYA A  W+ V ++R+ +    L+K PG SWIE+K +V  F  GD S+ 
Sbjct: 700 ENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            +++I A L  V   + + GY P+ +  L D EE EKE+ L  HSEKLA+A G+I++  G
Sbjct: 760 ETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IRV KNLR+C DCH   +F+SK+  REI++RD NRFH F++G CSC G+W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 243/457 (53%), Gaps = 9/457 (1%)

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG---IRPNEFSLSSMINACAGSGDSLL 114
           +RSV   N+    +     L+ AV   K + +SG   I P   +L S++  CA S     
Sbjct: 58  DRSVTDANTQLRRFCESGNLKNAV---KLLHVSGKWDIDPR--TLCSVLQLCADSKSLKD 112

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G+++  +    G+  D    + L  MY   G+L++A  VF  ++    + WN ++     
Sbjct: 113 GKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAK 172

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 ++ LF++M SS +  + +T++   K+ + +     G QLH  ++K        V
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSV 232

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LV  Y K   +D AR +F  M E+++I+WN +I+G++ NG   +  S+F  M   G+
Sbjct: 233 GNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI 292

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T+ +V    A  + I + + VH   VK  F  +D   N+L+D Y KCG ++ A  
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKV 352

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F+E S   +V+ TSMI  YA+ GL  EA+KL+ EM++  I+PD +  +++LN CA    
Sbjct: 353 VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRL 412

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            ++GK+VH  I +     D F  N+L++MYAKCGS+ +A+  FSE+  + I+SW+ +IGG
Sbjct: 413 LDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472

Query: 475 LAQHGRGKEALQMFGQML-EDGVLPNHITLVSVLCAC 510
            +++    EAL +F  +L E    P+  T+  VL AC
Sbjct: 473 YSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPAC 509



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 159/344 (46%), Gaps = 15/344 (4%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  TL +VL+  A  +++   K+V        F  D  + + L   Y  CG +++A ++F
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +      +    ++   A+ G    ++ L+ +M    +  DS+  S +  + ++L +  
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+Q+H +I+K GF      GNSLV  Y K   +D A + F E+ +R ++SW+++I G  
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA--EAKHHFESMEKKFGIQP 534
            +G  ++ L +F QML  G+  +  T+VSV   C  + L++   A H        FG++ 
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHC-------FGVKA 325

Query: 535 M--QEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
              +E   C  ++D+  + G    A  +   M  ++  S    + G AR     E  +  
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLF 385

Query: 591 AEM-LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
            EM    I P+  +   +L N  A   + D   +V  ++K+N +
Sbjct: 386 EEMEEEGISPDVYTVTAVL-NCCARNRLLDEGKRVHEWIKENDM 428


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/772 (36%), Positives = 450/772 (58%), Gaps = 6/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C+S K+L     +  ++   G   +      LV ++ + G+  ++ R+F+ I ++ 
Sbjct: 43  LLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V + ++   +     L++A+ FF  M    + P  ++ + ++  C    +  +G++IHG
Sbjct: 100 NVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G+  D+F+   L +MYAK   + +A  VF  +   D+VSWN ++AG   +     
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++   M    + P+  T  S L A + + L  +G+++H   ++    S   +   LVD
Sbjct: 220 ALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVD 279

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  AR++F  M E+N+++WN +I  ++QN    EA  +F  M  EGV     +
Sbjct: 280 MYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS 339

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +   L + A    +   + +H LSV+   + +  +VNSLI  Y KC  V+ A  +F +  
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           +  +V+  +MI  +AQ G   EAL  + +MQ R + PD+F   S++ A A LS     K 
Sbjct: 400 SRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +++     + F   +LV+MYAKCG+I  A   F  + +R + +W+AMI G   HG 
Sbjct: 460 IHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGI 519

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK AL++F +M +  + PN +T +SV+ AC+H+GLV      F  M++ + I+P  +HY 
Sbjct: 520 GKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYG 579

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRAG+  EA + +  MP +   +V+GA+LGA +I+KNV   +  AE LF + PE
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPE 639

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               HVLL+NIY +A MW+ V +VR  M    L+K PG S +E+K++V++F  G  +H  
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPS 699

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL-HDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           SK+IYA L+++   + +AGYVP  +T+L   +E+  KEQLL  HSEKLA++FGL+ T  G
Sbjct: 700 SKKIYAFLEKLICQIKEAGYVP--DTNLILGLEDDVKEQLLSSHSEKLAISFGLLNTTAG 757

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            TI V+KNLR+C DCH + ++IS +  REIIVRD+ RFHHF+NG+CSCG YW
Sbjct: 758 TTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/701 (40%), Positives = 416/701 (59%), Gaps = 1/701 (0%)

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y     L+ A+ FF  M    +RP  ++ + ++  C  + D   G++IHG  I  G+  +
Sbjct: 5   YAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWN 64

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F+   +V+MYAK   + DA  +F  +   D+V WN +I+G   +     AL L  +M  
Sbjct: 65  LFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSE 124

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
               P+  T  S L A A   L  +G  +H  +++   +S   V   LVDMY+KCGS+  
Sbjct: 125 EGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSI 184

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           AR+IF  M  + +++WN +I G++Q+G    A  +F  M  EGV     T+   L + A 
Sbjct: 185 ARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACAD 244

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              +   K VH L  +   +SD  ++NSLI  Y KC  V+ A  IFK      LV+  +M
Sbjct: 245 LGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAM 304

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  YAQ G   EAL  + EMQ R I PDSF   S++ A A LS   Q K +H  +I+   
Sbjct: 305 ILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFL 364

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             + F   +LV+MYAKCG+I  A + F  +  R +++W+AMI G   HG GK ++++F +
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKE 424

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M +  + PN IT +  L AC+H+GLV E    FESM+K +GI+P  +HY  M+D+LGRAG
Sbjct: 425 MKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAG 484

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           +  +A + +  MP +   +V+GA+LGA +I+KNV++G+ AA  +F + P+    HVLL+N
Sbjct: 485 RLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLAN 544

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
           IYA+A MW  VAKVR  M+ + L+K PG S +E+ ++V++F  G  SH +SK+IY+ L+ 
Sbjct: 545 IYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLET 604

Query: 671 VSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRI 730
           + D +  AGYVP   + +HDVE+  K QLL  HSEKLA+AFGL+ T  G  I ++KNLR+
Sbjct: 605 LVDEIRAAGYVPDTNS-IHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRV 663

Query: 731 CVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           C DCH + ++IS +  REIIVRD++RFH F++G CSCG YW
Sbjct: 664 CGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 161/541 (29%), Positives = 284/541 (52%), Gaps = 16/541 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C    DL  G ++HG V+ +GF  + F    +V MYAKC    D+  +FD +PER 
Sbjct: 36  LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERD 95

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V WN++ S Y    F + A+     M   G RP+  ++ S++ A A +    +G  +HG
Sbjct: 96  LVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHG 155

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G++S +  + ALVDMY+K G++  A  +F  ++H  +VSWN++I G V     + 
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG 215

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ +FQ+M    + P   T   AL ACA +   E G+ +H  + ++++ SD  V   L+ 
Sbjct: 216 AMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLIS 275

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  +D A  IF  +  K L++WN +I G+ QNG   EA + F  M    +  D  T
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFT 335

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + +V+ ++A        K +H L ++   + + +++ +L+D Y KCG +  A K+F   +
Sbjct: 336 MVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMN 395

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQG 418
           A  ++   +MI  Y   GLG+ +++L+ EM+   I P+  +F+C+  L+AC++    E+G
Sbjct: 396 ARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCA--LSACSHSGLVEEG 453

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLA 476
                 + K +G         ++V++  + G ++ A     ++P + GI  + AM+G   
Sbjct: 454 LCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACK 513

Query: 477 QHGR----GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            H       K A ++F    +DG    H+ L ++    +  G VA+ +    ++ +K G+
Sbjct: 514 IHKNVDLGEKAAFEIFKLNPDDG--GYHVLLANIYATASMWGKVAKVR----TIMEKSGL 567

Query: 533 Q 533
           Q
Sbjct: 568 Q 568



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 6/208 (2%)

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+  YA+    + AL  +  M+   + P  +  + LL  C + S  ++GK++H  +I  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F  + FA   +VNMYAKC  I+DA   F  +P+R +V W+ MI G AQ+G  K AL +  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGL--VAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           +M E+G  P+ IT+VS+L A     L  +  A H +     + G + +      ++D+  
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGY---VLRAGFESLVNVSTALVDMYS 177

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALL 575
           + G    A  + D M  +   S W +++
Sbjct: 178 KCGSVSIARVIFDGMDHRTVVS-WNSMI 204


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/772 (36%), Positives = 452/772 (58%), Gaps = 6/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C+S K+L    Q+  +V   G   + F    LV ++ + G+  ++ R+F+ I  + 
Sbjct: 43  LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V ++++   +     L++A+ FF  M    + P  ++ + ++  C    +  +G++IHG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G+  D+F+   L +MYAK   + +A  VF  +   D+VSWN ++AG   +     
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++ + M    + P+  T  S L A + + L  +G+++H   ++    S   +   LVD
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS++ AR +F  M E+N+++WN +I  ++QN    EA  +F  M  EGV     +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +   L + A    +   + +H LSV+   + +  +VNSLI  Y KC  V+ A  +F +  
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           +  LV+  +MI  +AQ G   +AL  + +M+ R + PD+F   S++ A A LS     K 
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +++     + F   +LV+MYAKCG+I  A   F  + +R + +W+AMI G   HG 
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK AL++F +M +  + PN +T +SV+ AC+H+GLV      F  M++ + I+   +HY 
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            M+D+LGRAG+  EA + +  MP +   +V+GA+LGA +I+KNV   + AAE LF + P+
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               HVLL+NIY +A MW+ V +VR  M    L+K PG S +E+K++V++F  G  +H  
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL-HDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           SK+IYA L+++   + +AGYVP  +T+L   VE   KEQLL  HSEKLA++FGL+ T  G
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVP--DTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAG 757

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            TI V+KNLR+C DCH + ++IS +  REI+VRD+ RFHHF+NG+CSCG YW
Sbjct: 758 TTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 286/779 (36%), Positives = 452/779 (58%), Gaps = 12/779 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KACT K D+ LG  VHG+ V  G   D FV N+++ +Y KCG   ++  LFD +PE++
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++SWNSL   +    F  EA   F+ ++ SG  + P+  ++ +++  C+G G+  +G  I
Sbjct: 276 LISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVI 335

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC----VL 174
           HG ++KLG   ++   NAL+DMY+K G L +A  +F+ IE+  +VSWN++I        +
Sbjct: 336 HGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDP 232
            E  D   K++ + +  E+N    T  + L AC  +E  EL   R LH   ++   +   
Sbjct: 396 FETFDLLRKMWMEEELMEVNE--VTILNLLPAC--LEESELLSLRALHGYSLRHSFQYKE 451

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           ++    +  YAKCGS+  A  +F  M  K++ +WN VI GH QNG  ++A   +  M R 
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  ++ ++L +      +   K++H   ++   E + ++  SL+  Y  C      
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
              F+     + V   +M++ Y+Q  L  EAL L+ +M    + PD    +S+L AC+ L
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           SA   GK+VH   +K   M D F   SL++MYAK G +  + R F+ +  + + SW+ MI
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMI 691

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G   HG+G +A+++F  M      P+  T + VL AC HAGLV+E  ++   M+  + +
Sbjct: 692 TGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P  EHYAC+ID+LGRAG+  EA+  ++ MP + +A +W +LL ++  Y ++E+G+  AE
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            L A+E  K+ +++LLSN+YA+AG WD V  VR+ MKD  L+K+ G SWIE++ KVY+F 
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFI 871

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            G+ S+  S EI    + +   + + GY P     LH++EE EK ++L  HSEK+A+ FG
Sbjct: 872 AGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFG 931

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + T  G T+R+ KNLRIC DCH + ++ISK   REI++RD  RFHHF+ G CSCG YW
Sbjct: 932 FLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 166/586 (28%), Positives = 314/586 (53%), Gaps = 18/586 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANS-LVVMYAKCGNFIDSRRLFDAIPER 59
           +L+ C   K++ +G ++  ++  +   S +FV N+ L+ MY+ CG  ++SR +FD +  +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN+L S YV  +  +EA+  F E++ ++  +P+ F+   +I AC G  D  LG+ +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG ++K+G   D+F  NA++ +Y K G L++AV +F  +   +++SWN++I G    E+ 
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG--FSENG 290

Query: 179 DW--ALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
            W  A + F+ +  S   + P++ T  + L  C+G    ++G  +H   +K+ +  + +V
Sbjct: 291 FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP--WMYRE 292
              L+DMY+KCG + EA ++F  +  K++++WN +I  + + G   E   L    WM  E
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  ++ T+  +L +      +   + +H  S++ +F+  + I N+ I AY KCG +  A
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFA 470

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F   +   + +  ++I  +AQ G   +AL  Y EM    I PD F   SLL AC  L
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              + GK++H  +++ G   ++F   SL+++Y  C         F  + D+  V W+AM+
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAML 590

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFG 531
            G +Q+    EAL +F QML DG+ P+ I + S+L AC+    +   K  H  +++    
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSL- 649

Query: 532 IQPMQEHY-AC-MIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              M++++ AC ++D+  ++G    +  + + +  +  AS W  ++
Sbjct: 650 ---MEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMI 691



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 234/454 (51%), Gaps = 13/454 (2%)

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HGYSIKLGYDSDMFS 133
           DFL+ A   +K      +   + ++  ++  C    +  +GRK+     +   +  D   
Sbjct: 89  DFLQRA---WKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVL 145

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SE 192
              L+ MY+  G   ++  VF  + + ++  WNA+++G V +E  D A+  F ++ S +E
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE 205

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             P+ FT+   +KAC G     LG+ +H   +KM +  D  VG  ++ +Y KCG +DEA 
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVAS 310
            +F  MPE+NLI+WN +I G  +NG  +EA   F  +   G G   D  T+ T+L   + 
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              + V   +H ++VK     +  + N+LID Y KCG + +A  +F++     +V+  SM
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385

Query: 371 ITAYAQFGLGEEAL----KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           I AY++ G   E      K+++E +  E+N  + +  +LL AC   S     + +H + +
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL--NLLPACLEESELLSLRALHGYSL 443

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           +  F       N+ +  YAKCGS+  A+  F  +  + + SW+A+IGG AQ+G   +AL 
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALD 503

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            + +M   G+LP+  ++VS+L AC   GL+   K
Sbjct: 504 FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK 537



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 161/315 (51%), Gaps = 15/315 (4%)

Query: 274 LQNGGDMEAA-SLFPWMYREGVGFD----QTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           L   GD+  A       ++   G+D    +  +  +L+    ++ + + +++  +   ++
Sbjct: 78  LCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSS 137

Query: 329 FESDDYIVNS-LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             S D+++N+ LI  Y  CG+  ++  +F      +L    ++++ Y +  L +EA+  +
Sbjct: 138 QFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTF 197

Query: 388 LEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           LE+    E  PD+F    L+ AC        GK VH   +K G + D F GN+++ +Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE--DGVLPNHITLV 504
           CG +D+A   F ++P++ ++SW+++I G +++G   EA + F  +LE  DG++P+  T+V
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTM 562
           ++L  C+  G V +       M  K G+  + E   C  +ID+  + G   EA  L   +
Sbjct: 318 TLLPVCSGEGNV-DVGMVIHGMAVKLGL--VHELMVCNALIDMYSKCGCLSEAAILFRKI 374

Query: 563 PFQANASVWGALLGA 577
             ++  S W +++GA
Sbjct: 375 ENKSVVS-WNSMIGA 388


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 293/807 (36%), Positives = 448/807 (55%), Gaps = 62/807 (7%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F S   +   +V  Y  CG    +  + + +     V WN L   ++    L+ A+    
Sbjct: 92  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+ +G RP+ F+L  ++ AC        G   HG     G++S++F  NALV MY++ G
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211

Query: 146 NLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDW-ALKLFQQM------KSSEINP 195
           +LE+A  +F +I      D++SWN++++  V    N W AL LF +M      K +    
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERS 270

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           ++ +  + L AC  ++     +++H + I+     D  VG  L+D YAKCG M+ A  +F
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS------------- 302
           ++M  K++++WN +++G+ Q+G    A  LF  M +E +  D  T +             
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390

Query: 303 ----------------------TVLKSVASFQAIGVCKQVHALSVKTAF---------ES 331
                                 +VL + AS  A     ++HA S+K            E 
Sbjct: 391 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 450

Query: 332 DDYIV-NSLIDAYGKCGHVEDAVKIFKESS--AVDLVACTSMITAYAQFGLGEEALKLYL 388
           +D +V N+LID Y KC   + A  IF +      ++V  T MI  +AQ+G   +ALKL++
Sbjct: 451 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 510

Query: 389 EM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT--FAGNSLVNMY 444
           EM  +   + P+++  S +L ACA+L+A   GKQ+H ++++      +  F  N L++MY
Sbjct: 511 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMY 570

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCG +D A   F  +  +  +SW++M+ G   HGRG EAL +F +M + G +P+ IT +
Sbjct: 571 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 630

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            VL AC+H G+V +   +F+SM   +G+ P  EHYAC ID+L R+G+  +A   V  MP 
Sbjct: 631 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPM 690

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           +  A VW ALL A R++ NVE+ +HA   L  +  E   ++ L+SNIYA+AG W +VA++
Sbjct: 691 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 750

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  MK + +KK PG SW++ +    +F VGDRSH  S +IYA L+ + D +   GYVP  
Sbjct: 751 RHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 810

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
              LHDV+E EK  LL  HSEKLA+A+GL+ T PG  IR+ KNLR+C DCH++F +ISKI
Sbjct: 811 NFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKI 870

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V  EI+VRD +RFHHF+NGSCSCGGYW
Sbjct: 871 VDHEIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 266/555 (47%), Gaps = 62/555 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC        G   HG++   GF+S+ F+ N+LV MY++CG+  ++  +FD I +R 
Sbjct: 168 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 227

Query: 61  ---VVSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGD 111
              V+SWNS+ S +V       A+  F +M L      +  R +  S+ +++ AC     
Sbjct: 228 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 287

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
               +++HG +I+ G   D+F  NAL+D YAK G +E+AV VF  +E  D+VSWNA++AG
Sbjct: 288 VPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 347

Query: 172 CV--------------LHEHN------DW---------------ALKLFQQMKSSEINPN 196
                           + + N       W               AL LF+QM  S   PN
Sbjct: 348 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPN 407

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKS----------DPIVGVGLVDMYAKCG 246
             T  S L ACA +     G ++H   +K  + +          D +V   L+DMY+KC 
Sbjct: 408 CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 467

Query: 247 SMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTLS 302
           S   AR IF  +P  E+N++ W ++I GH Q G   +A  LF  M  E  GV  +  T+S
Sbjct: 468 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 527

Query: 303 TVLKSVASFQAIGVCKQVHALSVK-TAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESS 360
            +L + A   AI + KQ+HA  ++   +ES  Y V N LID Y KCG V+ A  +F   S
Sbjct: 528 CILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS 587

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               ++ TSM+T Y   G G EAL ++ +M+     PD      +L AC++    +QG  
Sbjct: 588 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 647

Query: 421 VHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               +   +G           +++ A+ G +D A R   ++P +   V W A++     H
Sbjct: 648 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 707

Query: 479 GRGKEALQMFGQMLE 493
              + A     +++E
Sbjct: 708 SNVELAEHALNKLVE 722


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 285/752 (37%), Positives = 451/752 (59%), Gaps = 2/752 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDS--DEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           L+ C ++ D   G  VHG VV  G     D F AN L+ MY K G    +RRLFD +PER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++VS+ +L   +      E A   F+ +   G   N+F L++M+        + L   +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             + KLG+D + F  + L+D Y+    + DA  VF  I   D V W A+++    ++  +
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A ++F +M+ S   PN F  TS LKA   +    LG+ +H   IK    ++P VG  L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG + +AR+ F ++P  ++I  + +IS + Q+  + +A  LF  + R  V  ++ 
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           +LS+VL++  +   +   KQ+H  ++K   ESD ++ N+L+D Y KC  ++ ++KIF   
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+  +++  ++Q GLGEEAL ++ EMQ  ++       SS+L ACA+ ++     
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  I K  F +DT  GNSL++ YAKCG I DA + F  + +R I+SW+A+I G A HG
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           +  +AL++F +M +  V  N IT V++L  C+  GLV      F+SM    GI+P  EHY
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHY 605

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++ +LGRAG+  +A++ +  +P   +A VW ALL +  I+KNV +G+ +AE +  IEP
Sbjct: 606 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEP 665

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +  +T+VLLSN+YA+AG  D VA +R+ M++  ++K PG+SW+E+K +++ F+VG   H 
Sbjct: 666 QDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHP 725

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             + I A L+ ++   ++ GY+P +   LHDV++ +K ++L+ HSE+LA+A+GL+ TPPG
Sbjct: 726 DMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPG 785

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
             IR+ KNLR C+DCHT+F  ISKIV REIIV
Sbjct: 786 HPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 227/436 (52%), Gaps = 2/436 (0%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS--DMFSANALVDMYAKVGNLEDAVA 152
           + F+ +  +  C   GD+  GR +HG+ ++ G     D+F AN L++MY K+G L  A  
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +   ++VS+  ++         + A  LF++++      N F  T+ LK    M+ 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             L   +H    K+    +  VG GL+D Y+ C  + +A  +F+ +  K+ + W  ++S 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + +N     A  +F  M   G   +   L++VLK+     ++ + K +H  ++KT  +++
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  +L+D Y KCG ++DA   F+     D++  + MI+ YAQ    E+A +L+L +  
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P+ +  SS+L AC N+   + GKQ+H H IK G  SD F GN+L++ YAKC  +D 
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           + + FS + D   VSW+ ++ G +Q G G+EAL +F +M    +    +T  SVL AC  
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477

Query: 513 AGLVAEAKHHFESMEK 528
              +  A     S+EK
Sbjct: 478 TASIRHAGQIHCSIEK 493



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 212/404 (52%), Gaps = 15/404 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKA      + LG  +HG  + T  D++  V  +L+ MYAKCG+  D+R  F+ IP   
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+  + + S Y   +  E+A   F  ++ S + PNE+SLSS++ AC        G++IH 
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK+G++SD+F  NAL+D YAK  +++ ++ +F  +   + VSWN ++ G       + 
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F +M+++++     TY+S L+ACA         Q+HCS+ K    +D ++G  L+D
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG + +A  +F  + E+++I+WN +ISG+  +G   +A  LF  M +  V  +  T
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL------IDAYGKCGHVEDAVK 354
              +L   +S   +      H LS+  +   D  I  S+      +   G+ G + DA++
Sbjct: 569 FVALLSVCSSTGLVN-----HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQ 623

Query: 355 ----IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
               I    SA+   A  S    +    LG  + +  LE++ ++
Sbjct: 624 FIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQD 667


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/775 (37%), Positives = 452/775 (58%), Gaps = 6/775 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C S +D   GLQV   V+ +G      VANSL+ M    G   D+ +LF  + ER 
Sbjct: 151 VVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERD 210

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
            VSWN+L S Y H     ++   F +M   G+ R +  +L S+I+ CA S     G  +H
Sbjct: 211 TVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVH 270

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              ++ G  S +   NALV+MY+  G L DA  +F ++   D++SWN +I+  V + +N 
Sbjct: 271 SLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNM 330

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            ALK   Q+  +   P+  T++SAL AC+       GR +H   +++ +  + +VG  L+
Sbjct: 331 DALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLI 390

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY KC S+++A  IF LMP  ++++ NI+I  +       +A  +F WM R  V  +  
Sbjct: 391 TMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYI 450

Query: 300 TLSTVLKSVAS---FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           T+  +L S  S    +  G+   +HA ++   F SDDY+ NSLI  Y KCG +E +  +F
Sbjct: 451 TIVNILGSFTSSNDLRNYGL--PLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVF 508

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +      +V+  +MI A  Q G GEE+LKL+++M+      D    +  +++ A+L++ E
Sbjct: 509 QRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLE 568

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G Q+H   +K G  +D+   N+ ++MY KCG +D+  +   +   R    W+ +I G A
Sbjct: 569 EGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYA 628

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           ++G  KEA + F  M+  G  P+++T V++L AC+HAGLV +   ++ SM   FG+ P  
Sbjct: 629 RYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGI 688

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +H  C++DILGR G+F EA + ++ MP   N  +W +LL ++R +KN+++G+ AA+ L  
Sbjct: 689 KHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLE 748

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P   S +VLLSN+YA++  W +V +VR  MK   L K P  SW++ K +V TF +GD 
Sbjct: 749 LDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDH 808

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  + +IY KLDE+   L + GYV    + LHD +E +KEQ L++HSEKLA+A+GLI  
Sbjct: 809 SHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITV 868

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P G T+R+ KNLR+C DCH  F+ +S +  REI++RD  RFHHF+ GSCSC  +W
Sbjct: 869 PEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 168/612 (27%), Positives = 303/612 (49%), Gaps = 11/612 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G  +H +    G   + ++  +L+ +Y    + +D++RLF  +PER+VVSW +L      
Sbjct: 63  GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              LEEA+ +++ M    I  N  + +++++ C    D + G ++  + I  G    +  
Sbjct: 123 NGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSV 182

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKS 190
           AN+L+ M   +G + DA  +F  +E  D VSWNA+++   ++ H      + ++F  M+ 
Sbjct: 183 ANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVS---MYSHEGLCSKSFRVFSDMRR 239

Query: 191 SE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +  +  T  S +  CA  +    G  +H   ++  + S   V   LV+MY+  G + 
Sbjct: 240 GGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLA 299

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A  +F  M  ++LI+WN +IS ++QNG +M+A      +     G D+ T S+ L + +
Sbjct: 300 DAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACS 359

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  A+   + VHA++++ +   +  + NSLI  YGKC  +EDA +IF+     D+V+C  
Sbjct: 360 SPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNI 419

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ-GKQVHVHIIKF 428
           +I +YA    G +A++++  M+  E+  +     ++L +  + +     G  +H + I  
Sbjct: 420 LIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHA 479

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           GF+SD +  NSL+ MYAKCG ++ ++  F  I +R +VSW+AMI    QHG G+E+L++F
Sbjct: 480 GFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLF 539

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             M  DG   +HI L   + +      + E       +  K G+          +D+ G+
Sbjct: 540 MDMRHDGNGLDHICLAECMSSSASLASLEEGM-QLHGLGLKCGLGNDSHVVNAAMDMYGK 598

Query: 549 AGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
            GK  E ++++   P       W  L+ G AR     E  +    M+         T V 
Sbjct: 599 CGKMDEMLKMLPD-PAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVT 657

Query: 608 LSNIYASAGMWD 619
           L +  + AG+ D
Sbjct: 658 LLSACSHAGLVD 669



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 226/451 (50%), Gaps = 2/451 (0%)

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS-LLGRK 117
           R+  SW +  S  V C     A    + M   G+  + F+L+S++ AC    +    G  
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAA 65

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH  + K G   +++   AL+ +Y    ++ DA  +F ++   ++VSW A++     + H
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + AL  +++M+   I  N   + + +  C  +E +  G Q+   +I   ++    V   
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGF 296
           L+ M    G + +A  +F+ M E++ ++WN ++S +   G   ++  +F  M R G +  
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D TTL +++   AS   +     VH+L ++T   S   +VN+L++ Y   G + DA  +F
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              S  DL++  +MI++Y Q G   +ALK   ++      PD    SS L AC++  A  
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+ VH   ++     +   GNSL+ MY KC SI+DA+R F  +P+  +VS + +IG  A
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYA 425

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
               G +A+Q+F  M    V  N+IT+V++L
Sbjct: 426 VLEDGTKAMQVFFWMRRGEVKLNYITIVNIL 456



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 207/460 (45%), Gaps = 8/460 (1%)

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL-KELG 216
           +H    SW   I+GCV    +  A  + + M+   +  + F   S + AC   E  +  G
Sbjct: 4   DHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACG 63

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
             +H    K  +  +  +G  L+ +Y     + +A+ +F  MPE+N+++W  ++     N
Sbjct: 64  AAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSN 123

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA   +  M RE +  +    +TV+    S +      QV +  + +  +    + 
Sbjct: 124 GHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVA 183

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-I 395
           NSLI   G  G V DA K+F      D V+  ++++ Y+  GL  ++ +++ +M+    +
Sbjct: 184 NSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLL 243

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             D+    SL++ CA+      G  VH   ++ G  S     N+LVNMY+  G + DA+ 
Sbjct: 244 RHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEF 303

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F  +  R ++SW+ MI    Q+G   +AL+  GQ+L     P+ +T  S L AC+  G 
Sbjct: 304 LFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGA 363

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           + + +    +M  +  +         +I + G+    ++A  +   MP     S    L+
Sbjct: 364 LMDGR-MVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSC-NILI 421

Query: 576 GAARIYKNVEVGQHAAEMLFAIEP-EKSSTHVLLSNIYAS 614
           G+   Y  +E G  A ++ F +   E    ++ + NI  S
Sbjct: 422 GS---YAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGS 458


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 290/805 (36%), Positives = 470/805 (58%), Gaps = 38/805 (4%)

Query: 3   KACTSKKDLFLGLQVHGIVV----FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           K+  + + L     +HG  +      GF     VAN+L+  YA+CG+   +  LF+A+P 
Sbjct: 67  KSAAALRSLIAVRSIHGAALRRDLLHGFTPA--VANALLTAYARCGDLTAALALFNAMPS 124

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRK 117
           R  V++NSL +          A+   ++M+L G   + F+L S++ AC+   + L LGR+
Sbjct: 125 RDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGRE 184

Query: 118 IHGYSIKLGY-DSD-MFSANALVDMYAKVGNLEDAVAVFKDIEHPD-----IVSWNAVIA 170
            H +++K G+ D D  F+ NAL+ MYA++G ++DA  +F  ++  D     +V+WN +++
Sbjct: 185 AHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVS 244

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIK 229
             V       A+++   M +  + P+  T+ SAL AC+ +E+  LGR++H  ++K  ++ 
Sbjct: 245 LLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLA 304

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFP 287
           ++  V   LVDMYA    +  AR +F ++P   + L  WN ++ G+ Q G D EA  LF 
Sbjct: 305 ANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFA 364

Query: 288 WMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            M  E GV   +TT++ VL + A  +     + VH   +K     + ++ N+L+D Y + 
Sbjct: 365 RMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARL 424

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ--------------- 391
           G +E A  IF      D+V+  ++IT     G   +A +L  EMQ               
Sbjct: 425 GDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIA 484

Query: 392 ---DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
              +  + P++    +LL  CA L+A  +GK++H + ++    SD   G++LV+MYAKCG
Sbjct: 485 GTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCG 544

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVL 507
            +  +   F  +P R +++W+ +I     HG G EA+ +F +M + +   PN +T ++ L
Sbjct: 545 CLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAAL 604

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM-PFQA 566
            AC+H+G+V      F SM++  G+QP  + +AC +DILGRAG+  EA  ++ +M P + 
Sbjct: 605 AACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQ 664

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
             S W + LGA R+++NV +G+ AAE LF +EP+++S +VLL NIY++AG+W+  ++VR 
Sbjct: 665 QVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRN 724

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
            M+   + KEPG SWIE+   ++ F  G+ +H  S  ++A +D + + +   GY P   +
Sbjct: 725 RMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSS 784

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            LHD+EESEK  +L +HSEKLA+AFGL+ TPPGATIRV KNLR+C DCH + +FIS++V 
Sbjct: 785 VLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVG 844

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           REI++RDV RFHHF +G+CSCG YW
Sbjct: 845 REIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 252/515 (48%), Gaps = 40/515 (7%)

Query: 1   VLKACTS-KKDLFLGLQVHGIVVFTGF-DSDE-FVANSLVVMYAKCGNFIDSRRLFDAI- 56
           VL AC+   +DL LG + H   +  GF D DE F  N+L+ MYA+ G   D++ LF ++ 
Sbjct: 168 VLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVD 227

Query: 57  ----PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
               P   VV+WN++ S  V      EA+    +MV  G+RP+  + +S + AC+     
Sbjct: 228 TTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEML 287

Query: 113 LLGRKIHGYSIKLGYDSDM----FSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWN 166
            LGR++H Y +K   DSD+    F A+ALVDMYA    +  A  VF  +   H  +  WN
Sbjct: 288 SLGREMHAYVLK---DSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWN 344

Query: 167 AVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           A++ G      ++ AL+LF +M++ + + P+  T    L ACA  E       +H  ++K
Sbjct: 345 AMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLK 404

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
             +  +P V   L+D+YA+ G M+ AR IF  +  +++++WN +I+G +  G   +A  L
Sbjct: 405 RGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQL 464

Query: 286 FPWMYREGVGFDQT------------------TLSTVLKSVASFQAIGVCKQVHALSVKT 327
              M ++G   D T                  TL T+L   A   A    K++H  +++ 
Sbjct: 465 VREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRH 524

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           A +SD  + ++L+D Y KCG +  +  +F      +++    +I AY   GLG+EA+ L+
Sbjct: 525 ALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALF 584

Query: 388 LEM-QDREINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIKFGFMSDTFAGNSLVNMYA 445
             M    E  P+     + L AC++    ++G ++ H      G           V++  
Sbjct: 585 DRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILG 644

Query: 446 KCGSIDDADRAFS--EIPDRGIVSWSAMIGGLAQH 478
           + G +D+A    +  E  ++ + +WS+ +G    H
Sbjct: 645 RAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLH 679



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 217/434 (50%), Gaps = 35/434 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVF-TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           L AC+  + L LG ++H  V+  +   ++ FVA++LV MYA       +RR+FD +P   
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           R +  WN++   Y      EEA+  F  M   +G+ P+E +++ ++ ACA S ++  G++
Sbjct: 338 RQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARS-ETFAGKE 396

Query: 118 -IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HGY +K G   + F  NAL+D+YA++G++E A  +F  IE  D+VSWN +I GCV+  
Sbjct: 397 AVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQG 456

Query: 177 HNDWALKLFQQMKSS------------------EINPNMFTYTSALKACAGMELKELGRQ 218
           H   A +L ++M+                     + PN  T  + L  CA +     G++
Sbjct: 457 HIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKE 516

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H   ++  + SD  VG  LVDMYAKCG +  +R +F  +P++N+I WN++I  +  +G 
Sbjct: 517 IHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGL 576

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDY 334
             EA +LF  M        +    T + ++A+    G+  +     H++      +    
Sbjct: 577 GDEAIALFDRMVMSNEA--KPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPD 634

Query: 335 IVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITA---YAQFGLGEEALKLYLE 389
           +    +D  G+ G +++A  I    E     + A +S + A   +    LGE A +   +
Sbjct: 635 LHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQ 694

Query: 390 MQDREINPDSFVCS 403
           ++  E +    +C+
Sbjct: 695 LEPDEASHYVLLCN 708



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 182/374 (48%), Gaps = 19/374 (5%)

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKS--DPIVGVGLVDMYAKCGSMDEARMIF 255
           F    A K+ A +      R +H + ++ ++     P V   L+  YA+CG +  A  +F
Sbjct: 60  FALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALF 119

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF-QAI 314
           + MP ++ + +N +I+        + A      M  EG      TL +VL + +   + +
Sbjct: 120 NAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDL 179

Query: 315 GVCKQVHALSVKTAFESDD--YIVNSLIDAYGKCGHVEDAVKIFKESSAVD-----LVAC 367
            + ++ HA ++K  F   D  +  N+L+  Y + G V+DA  +F      D     +V  
Sbjct: 180 RLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTW 239

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            +M++   Q G   EA+++  +M  R + PD    +S L AC+ L     G+++H +++K
Sbjct: 240 NTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLK 299

Query: 428 -FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEA 484
                +++F  ++LV+MYA    +  A R F  +P   R +  W+AM+ G AQ G  +EA
Sbjct: 300 DSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEA 359

Query: 485 LQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVA--EAKHHFESMEKKFGIQPMQEHYAC 541
           L++F +M  E GV+P+  T+  VL AC  +   A  EA H +  +++     P  ++   
Sbjct: 360 LELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGY-VLKRGMADNPFVQN--A 416

Query: 542 MIDILGRAGKFQEA 555
           ++D+  R G  + A
Sbjct: 417 LMDLYARLGDMEAA 430


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 293/807 (36%), Positives = 448/807 (55%), Gaps = 62/807 (7%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F S   +   +V  Y  CG    +  + + +     V WN L   ++    L+ A+    
Sbjct: 85  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+ +G RP+ F+L  ++ AC        G   HG     G++S++F  NALV MY++ G
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204

Query: 146 NLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDW-ALKLFQQM------KSSEINP 195
           +LE+A  +F +I      D++SWN++++  V    N W AL LF +M      K +    
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERS 263

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           ++ +  + L AC  ++     +++H + I+     D  VG  L+D YAKCG M+ A  +F
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS------------- 302
           ++M  K++++WN +++G+ Q+G    A  LF  M +E +  D  T +             
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383

Query: 303 ----------------------TVLKSVASFQAIGVCKQVHALSVKTAF---------ES 331
                                 +VL + AS  A     ++HA S+K            E 
Sbjct: 384 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 443

Query: 332 DDYIV-NSLIDAYGKCGHVEDAVKIFKESS--AVDLVACTSMITAYAQFGLGEEALKLYL 388
           +D +V N+LID Y KC   + A  IF +      ++V  T MI  +AQ+G   +ALKL++
Sbjct: 444 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 503

Query: 389 EM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT--FAGNSLVNMY 444
           EM  +   + P+++  S +L ACA+L+A   GKQ+H ++++      +  F  N L++MY
Sbjct: 504 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMY 563

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCG +D A   F  +  +  +SW++M+ G   HGRG EAL +F +M + G +P+ IT +
Sbjct: 564 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 623

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            VL AC+H G+V +   +F+SM   +G+ P  EHYAC ID+L R+G+  +A   V  MP 
Sbjct: 624 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPM 683

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           +  A VW ALL A R++ NVE+ +HA   L  +  E   ++ L+SNIYA+AG W +VA++
Sbjct: 684 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 743

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  MK + +KK PG SW++ +    +F VGDRSH  S +IYA L+ + D +   GYVP  
Sbjct: 744 RHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 803

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
              LHDV+E EK  LL  HSEKLA+A+GL+ T PG  IR+ KNLR+C DCH++F +ISKI
Sbjct: 804 NFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKI 863

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V  EI+VRD +RFHHF+NGSCSCGGYW
Sbjct: 864 VDHEIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 266/555 (47%), Gaps = 62/555 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC        G   HG++   GF+S+ F+ N+LV MY++CG+  ++  +FD I +R 
Sbjct: 161 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 220

Query: 61  ---VVSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGD 111
              V+SWNS+ S +V       A+  F +M L      +  R +  S+ +++ AC     
Sbjct: 221 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 280

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
               +++HG +I+ G   D+F  NAL+D YAK G +E+AV VF  +E  D+VSWNA++AG
Sbjct: 281 VPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 340

Query: 172 CV--------------LHEHN------DW---------------ALKLFQQMKSSEINPN 196
                           + + N       W               AL LF+QM  S   PN
Sbjct: 341 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPN 400

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKS----------DPIVGVGLVDMYAKCG 246
             T  S L ACA +     G ++H   +K  + +          D +V   L+DMY+KC 
Sbjct: 401 CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 460

Query: 247 SMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTLS 302
           S   AR IF  +P  E+N++ W ++I GH Q G   +A  LF  M  E  GV  +  T+S
Sbjct: 461 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 520

Query: 303 TVLKSVASFQAIGVCKQVHALSVK-TAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESS 360
            +L + A   AI + KQ+HA  ++   +ES  Y V N LID Y KCG V+ A  +F   S
Sbjct: 521 CILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS 580

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               ++ TSM+T Y   G G EAL ++ +M+     PD      +L AC++    +QG  
Sbjct: 581 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 640

Query: 421 VHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               +   +G           +++ A+ G +D A R   ++P +   V W A++     H
Sbjct: 641 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 700

Query: 479 GRGKEALQMFGQMLE 493
              + A     +++E
Sbjct: 701 SNVELAEHALNKLVE 715


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 286/779 (36%), Positives = 452/779 (58%), Gaps = 12/779 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KACT K D+ LG  VHG+ V  G   D FV N+++ +Y KCG   ++  LFD +PE++
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++SWNSL   +    F  EA   F+ ++ SG  + P+  ++ +++  C+G G+  +G  I
Sbjct: 276 LISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVI 335

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC----VL 174
           HG ++KLG   ++   NAL+DMY+K G L +A  +F+ IE+  +VSWN++I        +
Sbjct: 336 HGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDP 232
            E  D   K++ + +  E+N    T  + L AC  +E  EL   R LH   ++   +   
Sbjct: 396 FETFDLLRKMWMEEELMEVNE--VTILNLLPAC--LEESELLSLRALHGYSLRHSFQYKE 451

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           ++    +  YAKCGS+  A  +F  M  K++ +WN VI GH QNG  ++A   +  M R 
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  ++ ++L +      +   K++H   ++   E + ++  SL+  Y  C      
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
              F+     + V   +M++ Y+Q  L  EAL L+ +M    + PD    +S+L AC+ L
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           SA   GK+VH   +K   M D F   SL++MYAK G +  + R F+ +  + + SW+ MI
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMI 691

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G   HG+G +A+++F  M      P+  T + VL AC HAGLV+E  ++   M+  + +
Sbjct: 692 TGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P  EHYAC+ID+LGRAG+  EA+  ++ MP + +A +W +LL ++  Y ++E+G+  AE
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            L A+E  K+ +++LLSN+YA+AG WD V  VR+ MKD  L+K+ G SWIE++ KVY+F 
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFI 871

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            G+ S+  S EI    + +   + + GY P     LH++EE EK ++L  HSEK+A+ FG
Sbjct: 872 AGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFG 931

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + T  G T+R+ KNLRIC DCH + ++ISK   REI++RD  RFHHF+ G CSCG YW
Sbjct: 932 FLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/586 (28%), Positives = 314/586 (53%), Gaps = 18/586 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANS-LVVMYAKCGNFIDSRRLFDAIPER 59
           +L+ C   K++ +G ++  ++  +   S +FV N+ L+ MY+ CG  ++SR +FD +  +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN+L S YV  +  +EA+  F E++ ++  +P+ F+   +I AC G  D  LG+ +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG ++K+G   D+F  NA++ +Y K G L++AV +F  +   +++SWN++I G    E+ 
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG--FSENG 290

Query: 179 DW--ALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
            W  A + F+ +  S   + P++ T  + L  C+G    ++G  +H   +K+ +  + +V
Sbjct: 291 FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP--WMYRE 292
              L+DMY+KCG + EA ++F  +  K++++WN +I  + + G   E   L    WM  E
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  ++ T+  +L +      +   + +H  S++ +F+  + I N+ I AY KCG +  A
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFA 470

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F   +   + +  ++I  +AQ G   +AL  Y EM    I PD F   SLL AC  L
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              + GK++H  +++ G   ++F   SL+++Y  C         F  + D+  V W+AM+
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAML 590

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFG 531
            G +Q+    EAL +F QML DG+ P+ I + S+L AC+    +   K  H  +++    
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSL- 649

Query: 532 IQPMQEHY-AC-MIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              M++++ AC ++D+  ++G    +  + + +  +  AS W  ++
Sbjct: 650 ---MEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMI 691



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 234/454 (51%), Gaps = 13/454 (2%)

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HGYSIKLGYDSDMFS 133
           DFL+ A   +K      +   + ++  ++  C    +  +GRK+     +   +  D   
Sbjct: 89  DFLQRA---WKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVL 145

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SE 192
              L+ MY+  G   ++  VF  + + ++  WNA+++G V +E  D A+  F ++ S +E
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE 205

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             P+ FT+   +KAC G     LG+ +H   +KM +  D  VG  ++ +Y KCG +DEA 
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVAS 310
            +F  MPE+NLI+WN +I G  +NG  +EA   F  +   G G   D  T+ T+L   + 
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              + V   +H ++VK     +  + N+LID Y KCG + +A  +F++     +V+  SM
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385

Query: 371 ITAYAQFGLGEEAL----KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           I AY++ G   E      K+++E +  E+N  + +  +LL AC   S     + +H + +
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL--NLLPACLEESELLSLRALHGYSL 443

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           +  F       N+ +  YAKCGS+  A+  F  +  + + SW+A+IGG AQ+G   +AL 
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALD 503

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            + +M   G+LP+  ++VS+L AC   GL+   K
Sbjct: 504 FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK 537



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 161/315 (51%), Gaps = 15/315 (4%)

Query: 274 LQNGGDMEAA-SLFPWMYREGVGFD----QTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           L   GD+  A       ++   G+D    +  +  +L+    ++ + + +++  +   ++
Sbjct: 78  LCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSS 137

Query: 329 FESDDYIVNS-LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             S D+++N+ LI  Y  CG+  ++  +F      +L    ++++ Y +  L +EA+  +
Sbjct: 138 QFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTF 197

Query: 388 LEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           LE+    E  PD+F    L+ AC        GK VH   +K G + D F GN+++ +Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE--DGVLPNHITLV 504
           CG +D+A   F ++P++ ++SW+++I G +++G   EA + F  +LE  DG++P+  T+V
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTM 562
           ++L  C+  G V +       M  K G+  + E   C  +ID+  + G   EA  L   +
Sbjct: 318 TLLPVCSGEGNV-DVGMVIHGMAVKLGL--VHELMVCNALIDMYSKCGCLSEAAILFRKI 374

Query: 563 PFQANASVWGALLGA 577
             ++  S W +++GA
Sbjct: 375 ENKSVVS-WNSMIGA 388


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/674 (39%), Positives = 417/674 (61%), Gaps = 32/674 (4%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM- 188
           ++FS N ++ +Y+K+G L     +F  +   D VSWN  I+G   +     A+++++ M 
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           K + +N N  T+++ L  C+     +LGRQ++  ++K    SD  VG  LVDMY K G +
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 249 DEARMIFHLMPEKNL-------------------------------IAWNIVISGHLQNG 277
            +A+  F  MPE+N+                               I+W I+I+G +QNG
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
            + EA  +F  M   G   DQ T  +VL +  S  A+G  KQ+HA  ++T  + + ++ +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y KC  ++ A  +FK     ++++ T+M+  Y Q G  EEA+K++ EMQ   + P
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D F   S++++CANL++ E+G Q H   +  G +S     N+L+ +Y KCGS +++ R F
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLF 429

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           +E+  R  VSW+A++ G AQ G+  E + +F +ML  G+ P+ +T + VL AC+ AGLV 
Sbjct: 430 TEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVE 489

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +   +FESM K+ GI P+ +H  C+ID+LGRAG+ +EA   ++ MP   +   W  LL +
Sbjct: 490 KGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSS 549

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R++ ++E+G+ AA+ L A+EP+  +++VLLS++YAS G WD VA++RR M+D +++KEP
Sbjct: 550 CRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEP 609

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G SWI+ K KV+ F+  D+S     +IYA+L++++  + + GYVP + + LHDVEESEK 
Sbjct: 610 GYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKI 669

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
           ++L HHSEKLA+AFGLI  PPG  IRV KNLR+C DCH + +FISKI  REI+VRD  RF
Sbjct: 670 KMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRF 729

Query: 758 HHFRNGSCSCGGYW 771
           H F++G+CSCG +W
Sbjct: 730 HLFKDGTCSCGDFW 743



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 260/544 (47%), Gaps = 65/544 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C   ++     ++H +++ T    + F++N+L+  Y K GN   +  +FD IP+ +
Sbjct: 11  LLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN 70

Query: 61  VVSWNSLFSCYVHCDFLEE-------------------------------AVCFFKEMVL 89
           + SWN++ S Y     L +                               AV  +K M+ 
Sbjct: 71  LFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLK 130

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            + +  N  + S+M+  C+      LGR+I+G  +K G+ SD+F  + LVDMY K+G + 
Sbjct: 131 DAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIY 190

Query: 149 DAVAVFKDIEHPDIVSWNAVIAG--------------CVLHEHND--W------------ 180
           DA   F ++   ++V  N +I G              C L E +   W            
Sbjct: 191 DAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGL 250

Query: 181 ---ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL +F++M+ +    + FT+ S L AC  +     G+Q+H  +I+ + K +  VG  
Sbjct: 251 EREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSA 310

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LVDMY+KC S+  A  +F  MP+KN+I+W  ++ G+ QNG   EA  +F  M R GV  D
Sbjct: 311 LVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPD 370

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             TL +V+ S A+  ++    Q H  ++ +   S   + N+LI  YGKCG  E++ ++F 
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFT 430

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E +  D V+ T+++  YAQFG   E + L+  M    + PD      +L+AC+     E+
Sbjct: 431 EMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEK 490

Query: 418 GKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           G Q    +IK  G M        ++++  + G +++A    + +P    +V W+ ++   
Sbjct: 491 GLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSC 550

Query: 476 AQHG 479
             HG
Sbjct: 551 RVHG 554



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 219/467 (46%), Gaps = 69/467 (14%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y S LK C   + +   ++LHC ++K   + +  +   L+  Y K G++  A  +F  +P
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGF---------------------- 296
           + NL +WN ++S + + G   +   +F  M +R+GV +                      
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 297 ---------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
                    ++ T ST+L   + F+ + + +Q++   +K  F SD ++ + L+D Y K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 348 HVEDAVKIFKESSAVDLVAC-------------------------------TSMITAYAQ 376
            + DA + F E    ++V C                               T MIT   Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GL  EAL ++ EM+      D F   S+L AC +L A  +GKQ+H ++I+     + F 
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           G++LV+MY+KC SI  A+  F  +P + ++SW+AM+ G  Q+G  +EA+++F +M  +GV
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 497 LPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            P+  TL SV+ +C N A L   A+ H  ++    G+         +I + G+ G  + +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVS--GLISFITVSNALITLYGKCGSTENS 425

Query: 556 MELVDTMPFQANASVWGALL-GAARIYK-NVEVGQHAAEMLFAIEPE 600
             L   M  +   S W ALL G A+  K N  +G     +   ++P+
Sbjct: 426 HRLFTEMNIRDEVS-WTALLAGYAQFGKANETIGLFERMLAHGLKPD 471



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 259/588 (44%), Gaps = 102/588 (17%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C+  + + LG Q++G ++  GF SD FV + LV MY K G   D++R FD +PER+
Sbjct: 144 MLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERN 203

Query: 61  VVSWNSLFSCYVHCDFLE-------------------------------EAVCFFKEMVL 89
           VV  N++ +  + C  +E                               EA+  F+EM L
Sbjct: 204 VVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRL 263

Query: 90  SGIRPNEFSLSSMINACAGSGDSLL----GRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +G   ++F+  S++ AC     SLL    G++IH Y I+  +  ++F  +ALVDMY+K  
Sbjct: 264 AGFAMDQFTFGSVLTACG----SLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCR 319

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +++ A  VFK +   +++SW A++ G   +  ++ A+K+F +M+ + + P+ FT  S + 
Sbjct: 320 SIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVIS 379

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           +CA +   E G Q HC  +   + S   V   L+ +Y KCGS + +  +F  M  ++ ++
Sbjct: 380 SCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVS 439

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W  +++G+ Q G   E   LF  M   G+  D  T             IGV         
Sbjct: 440 WTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTF------------IGV--------- 478

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIF----KESSAVDLVA-CTSMITAYAQFGLG 380
                         + A  + G VE  ++ F    KE   + +V  CT +I    + G  
Sbjct: 479 --------------LSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRL 524

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           EEA      + +   +PD    ++LL++C      E GK     +I      +  +   L
Sbjct: 525 EEARNF---INNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALE-PQNPASYVLL 580

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGLAQHGRGKEALQMFGQ----- 490
            ++YA  G  D   +    + D+ +      SW    G +       ++    GQ     
Sbjct: 581 SSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAEL 640

Query: 491 ------MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
                 M+E+G +P+   + SVL     +  +    HH E +   FG+
Sbjct: 641 EKLNYKMIEEGYVPD---MSSVLHDVEESEKIKMLNHHSEKLAIAFGL 685


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 294/770 (38%), Positives = 452/770 (58%), Gaps = 16/770 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G   H  ++ T F+   F+ N+ + +Y+K G   ++++LFD + ERSV+S+N L S Y  
Sbjct: 28  GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGG 87

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
             F  +A+  F E  ++ ++ ++FS + +++AC    D  LG+ IHG +I  G    +F 
Sbjct: 88  MGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFL 147

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            N L+DMY K   ++ A  +F+  +  D VSWN++I G       +  LKL  +M  + +
Sbjct: 148 TNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGL 207

Query: 194 NPNMFTYTSALKACAGMELKEL---GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             N FT  SALK+C  + L  +   G+ LH   +K  +  D +VG  L+DMYAK G + +
Sbjct: 208 RLNAFTLGSALKSCY-LNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGD 266

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGG-----DMEAASLFPWMYREGVGFDQTTLSTVL 305
           A  +F   P +N++ +N +I+G +Q          EA  LF  M R+G+     T S+++
Sbjct: 267 AIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSII 326

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           K     +A    KQ+HA   K   +SD++I ++LI+ Y   G  ED +K F  +  +D+V
Sbjct: 327 KICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIV 386

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           + T+MI  YAQ G  E AL L+ E+      PD F+ +++L+ACA+++A   G+QVH + 
Sbjct: 387 SWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYA 446

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +K G  +     NS ++MYAK G++D A   F EI +  +VSWS MI   AQHG  K+A+
Sbjct: 447 VKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAI 506

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F  M   G+ PN IT + VL AC+H GLV E   ++ESM+K + ++   +H  C++D+
Sbjct: 507 NLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDL 566

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           L RAG+  +A   +    F  +  +W  LL   RIYK++  G+H AE L  ++P++SS++
Sbjct: 567 LSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSY 626

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLL NIY  AG+     K+R  MKD  ++KEPG SWIEV ++V++F VGD SH  S+ IY
Sbjct: 627 VLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIY 686

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL----LYHHSEKLAVAFGLIATPPGAT 721
            KL+ + +   K GY   ++  + +V  S KE      + HHSEKLAV+FG+++ PP A 
Sbjct: 687 KKLEGMLEKKRKIGY---IDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAP 743

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++V KNLR+C DCH + + IS +  REII+RD  RFHHF+ GSCSC  YW
Sbjct: 744 VKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 261/487 (53%), Gaps = 17/487 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC   KD  LG  +HG+ +  G     F+ N L+ MY KC     +R LF++  E  
Sbjct: 116 VLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELD 175

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL--GRKI 118
            VSWNSL + Y      EE +    +M  +G+R N F+L S + +C  + ++++  G+ +
Sbjct: 176 NVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTL 235

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HGY++K G D D+    AL+DMYAK G L DA+ +F+   + ++V +NA+IAG +  E  
Sbjct: 236 HGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDI 295

Query: 179 DW-----ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           D      ALKLF QM+   I P+ FT++S +K C  +E  E G+Q+H  + K  I+SD  
Sbjct: 296 DKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEF 355

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +G  L+++Y+  GS ++    F+  P+ ++++W  +I+G+ QNG    A +LF  +   G
Sbjct: 356 IGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASG 415

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D+  ++T+L + A   A    +QVH  +VKT   +   + NS I  Y K G+++ A 
Sbjct: 416 KKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAK 475

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
             F+E    D+V+ + MI + AQ G  ++A+ L+  M+   I+P+      +L AC++  
Sbjct: 476 ITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGG 535

Query: 414 AYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDA-----DRAFSEIPDRGIVS 467
             E+G + +  + K +    +      +V++ ++ G + DA     +  F + P    V 
Sbjct: 536 LVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHP----VM 591

Query: 468 WSAMIGG 474
           W  ++ G
Sbjct: 592 WRTLLSG 598



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 226/429 (52%), Gaps = 12/429 (2%)

Query: 94  PNEFSLSS-----MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           P+ F L S     ++   + SG S+ G+  H + IK  ++  +F  N  +++Y+K G + 
Sbjct: 2   PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +    ++S+N +I+G         A+ LF + + + +  + F+Y   L AC 
Sbjct: 62  NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            ++   LG+ +H   I   +     +   L+DMY KC  +D AR++F    E + ++WN 
Sbjct: 122 QIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS 181

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS--VASFQAIGVCKQVHALSVK 326
           +I+G+ + G   E   L   M+  G+  +  TL + LKS  +     +   K +H  +VK
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVK 241

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----GLGE 381
              + D  +  +L+D Y K G++ DA+++F+ S   ++V   +MI  + Q          
Sbjct: 242 QGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY 301

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EALKL+ +MQ + I P  F  SS++  C ++ A+E GKQ+H HI K    SD F G++L+
Sbjct: 302 EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
            +Y+  GS +D  + F+  P   IVSW+ MI G AQ+G+ + AL +F ++L  G  P+  
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421

Query: 502 TLVSVLCAC 510
            + ++L AC
Sbjct: 422 IITTMLSAC 430


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 285/762 (37%), Positives = 457/762 (59%), Gaps = 6/762 (0%)

Query: 14  GLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G  VH   VF    +   ++ N ++  + K G    +R LFD + ER+ VSW  L   Y+
Sbjct: 57  GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
             +  +EA   + +M   GI P+  +L ++++         +  +IH + IKLGY+ ++ 
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N+LVD Y K   L  A  +FK + + D V++N+++ G      N+ A++LF ++ +S 
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I P+ FT+ + L A  G++  + G+Q+H  ++K     +  VG  L+D Y+K   +DE  
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVG 296

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F+ MPE + I++N+VI+ +  NG   E+  LF  +        Q   +T+L    S  
Sbjct: 297 KLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSL 356

Query: 313 AIGVCKQVH--ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
            + + +Q+H  A++V   FES   + N+L+D Y KC   ++A KIF   +    V  T+M
Sbjct: 357 NLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAM 414

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I+AY Q G  EE + ++ +M+   +  D    +S+L ACANL++   G+Q+H  +I+ GF
Sbjct: 415 ISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGF 474

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           MS+ ++G++L++ YAKCG + DA ++F E+P+R  VSW+A+I   AQ+G     L  F Q
Sbjct: 475 MSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQ 534

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M++ G  P+ ++ +SVL AC+H G V EA  HF SM + + + P +EHY  M+D+L R G
Sbjct: 535 MIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNG 594

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLS 609
           +F EA +L+  MPF+ +  +W ++L + RI+KN E+ + AA+ LF +E  + ++ ++ +S
Sbjct: 595 RFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMS 654

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA AG WDNVAKV++ M+D  ++K P  SW+E+K + + F+  D+SH   K+I  K++
Sbjct: 655 NIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKIN 714

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            +S  + K GY P     LHDV+E  K + L +HSE+ A+AF L+ TP G+ I V KNLR
Sbjct: 715 ALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLR 774

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            C DCH + + IS+IV REIIVRD +RFHHF++G CSCG YW
Sbjct: 775 ACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 220/470 (46%), Gaps = 43/470 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A     D   G QVHG V+ T F  + FV N+L+  Y+K     +  +LF  +PE  
Sbjct: 247 LLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELD 306

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+N + + Y      +E+   F+++  +     +F  +++++    S +  +GR+IH 
Sbjct: 307 GISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHC 366

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I +G + +    NALVDMYAK    ++A  +F +I     V W A+I+  V    ++ 
Sbjct: 367 QAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEE 426

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + +F  M+ + +  +  T+ S L+ACA +    LGRQLH  LI+    S+   G  L+D
Sbjct: 427 GINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLD 486

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG M +A   F  MPE+N ++WN +IS + QNG                       
Sbjct: 487 TYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN---------------------- 524

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              V  ++ SFQ +          +++ ++ D     S++ A   CG VE+A+  F   +
Sbjct: 525 ---VDGTLNSFQQM----------IQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571

Query: 361 AVDLVAC-----TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            +  V       TSM+    + G  +EA KL  EM      P   + SS+LN+C     +
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNSCRIHKNH 628

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           E  K+    +     + D     ++ N+YA  G  D+  +    + DRG+
Sbjct: 629 ELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGV 678



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 46/386 (11%)

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH------------------------- 273
           V+ + + G +  A  +F  MP KN I+ N++ISGH                         
Sbjct: 50  VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109

Query: 274 ------LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
                 LQ+    EA  L+  M R G+  D  TL T+L      +   V  Q+H   +K 
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            +E +  + NSL+DAY K   +  A ++FK     D V   S++T Y+  GL EEA++L+
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           LE+ +  I P  F  ++LL+A   L   + G+QVH  ++K  F+ + F GN+L++ Y+K 
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM----LEDGVLPNHITL 503
             +D+  + F E+P+   +S++ +I   A +G+ KE+  +F ++     +    P   TL
Sbjct: 290 DQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP-FATL 348

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           +S+  A +   L    + H +++      +   E+   ++D+  +    +EA ++ D + 
Sbjct: 349 LSI--ATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEAQKIFDNIA 404

Query: 564 FQANASVWGALLGAARIYKNVEVGQH 589
            ++    W A++ A      V+ G+H
Sbjct: 405 CKSTVP-WTAMISAY-----VQKGKH 424


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 279/773 (36%), Positives = 456/773 (58%), Gaps = 5/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  K+    G +VH  V  T       + N+L+ M+ + G+ +++  +F  + ER 
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN L   Y    + +EA+  +  M+  GIRP+ ++   ++  C G  D   GR++H 
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ G++SD+   NAL+ MY K G++  A  VF  +   D +SWNA+I+G   ++    
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF  M+   ++P++ T TS + AC  +  + LGR++H  +IK    ++  V   L+ 
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M++  G  DEA M+F  M  K+L++W  +ISG+ +NG   +A   +  M  EGV  D+ T
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + A    +     +H  + +T   S   + NSLID Y KC  ++ A+++F    
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++++ TS+I          EAL  + +M    + P+S    S+L+ACA + A   GK+
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H H ++ G   D F  N+L++MY +CG ++ A   F+   ++ + SW+ ++ G AQ G+
Sbjct: 519 IHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGK 577

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G  A+++F +M+E  V P+ IT  S+LCAC+ +G+V +   +FESME KF I P  +HYA
Sbjct: 578 GGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYA 637

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            ++D+LGRAG+ ++A E +  MP   + ++WGALL A RIY+NVE+G+ AA+ +F ++ +
Sbjct: 638 SVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTK 697

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               ++LL N+YA +G WD VA+VR+ M++N+L  +PG SW+EV  +V+ F  GD  H +
Sbjct: 698 SVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQ 757

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            KEI A L+   + +   G + M +    D  ++ K ++   HSE+LA+AFGLI T PG 
Sbjct: 758 IKEINAVLEGFYEKMEATG-LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGT 816

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG--GYW 771
            I V KNL +C +CH + +FISK+V R I VRD  +FHHF++G CSCG  GYW
Sbjct: 817 PIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 259/500 (51%), Gaps = 6/500 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           LE+A+     M    +   E +  +++  C     +  G ++H Y  K      +   NA
Sbjct: 75  LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNA 134

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ M+ + G+L +A  VF  +   D+ SWN ++ G     + D AL L+ +M    I P+
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           ++T+   L+ C G+     GR++H  +I+   +SD  V   L+ MY KCG +  AR++F 
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP ++ I+WN +ISG+ +N   +E   LF  M    V  D  T+++V+ +  +     +
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            ++VH   +KT F ++  + NSLI  +   G  ++A  +F +    DLV+ T+MI+ Y +
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GL E+A++ Y  M+   + PD    +S+L+ACA L   ++G  +H    + G  S    
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            NSL++MY+KC  ID A   F  IP++ ++SW+++I GL  + R  EAL  F QM+   +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SL 493

Query: 497 LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            PN +TLVSVL AC   G ++  K  H  ++    G      +   ++D+  R G+ + A
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVRCGRMEPA 551

Query: 556 MELVDTMPFQANASVWGALL 575
               ++   + + + W  LL
Sbjct: 552 WNQFNSC--EKDVASWNILL 569



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 230/445 (51%), Gaps = 3/445 (0%)

Query: 166 NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           N++I    L    + AL     M+  +++    TY + L+ C        G ++H  + K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
              +    +G  L+ M+ + G + EA  +F  M E++L +WN+++ G+ + G   EA +L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           +  M   G+  D  T   VL++      +   ++VH   ++  FESD  +VN+LI  Y K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG +  A  +F      D ++  +MI+ Y +  +  E L+L+  M++  ++PD    +S+
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           ++AC  L     G++VH ++IK GF+++    NSL+ M++  G  D+A+  FS++  + +
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW+AMI G  ++G  ++A++ +  M  +GV+P+ IT+ SVL AC   GL+ +     E 
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEF 422

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI-YKNV 584
            ++  G+         +ID+  +     +A+E+   +P   N   W +++   R+ Y++ 
Sbjct: 423 ADRT-GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSF 480

Query: 585 EVGQHAAEMLFAIEPEKSSTHVLLS 609
           E      +M+ +++P   +   +LS
Sbjct: 481 EALFFFQQMILSLKPNSVTLVSVLS 505


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 285/762 (37%), Positives = 456/762 (59%), Gaps = 6/762 (0%)

Query: 14  GLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G  VH   VF    +   ++ N ++  + K G    +R LFD + ER+ VSW  L   Y+
Sbjct: 57  GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
             +  +EA   + +M   GI P+  +L ++++         +  +IH + IKLGY+ ++ 
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N+LVD Y K   L  A  +FK + + D V++N+++ G      N+ A++LF ++ +S 
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I P+ FT+ + L A  G++  + G+Q+H  ++K     +  VG  L+D Y+K   +DE  
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVG 296

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MPE + I++N+VI+ +  NG   E+  LF  +        Q   +T+L    S  
Sbjct: 297 KLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSL 356

Query: 313 AIGVCKQVH--ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
            + + +Q+H  A++V   FES   + N+L+D Y KC   ++A KIF   +    V  T+M
Sbjct: 357 NLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAM 414

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I+AY Q G  EE + ++ +M+   +  D    +S+L ACANL++   G+Q+H  +I+ GF
Sbjct: 415 ISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGF 474

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           MS+ ++G++L++ YAKCG + DA ++F E+P+R  VSW+A+I   AQ+G     L  F Q
Sbjct: 475 MSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQ 534

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M++ G  P+ ++ +SVL AC+H G V EA  HF SM + + + P +EHY  M+D+L R G
Sbjct: 535 MIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNG 594

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLS 609
           +F EA +L+  MPF+ +  +W ++L + RI+KN E+ + AA+ LF +E  + ++ ++ +S
Sbjct: 595 RFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMS 654

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA AG WDNVAKV++ M+D  ++K P  SW+E+K + + F+  D+SH   K+I  K++
Sbjct: 655 NIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKIN 714

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            +S  + K GY P     LHDV+E  K + L +HSE+ A+AF L+ TP G+ I V KNLR
Sbjct: 715 ALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLR 774

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            C DCH + + IS+IV REIIVRD +RFHHF++G CSCG YW
Sbjct: 775 ACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 220/470 (46%), Gaps = 43/470 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A     D   G QVHG V+ T F  + FV N+L+  Y+K     +  +LF  +PE  
Sbjct: 247 LLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELD 306

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+N + + Y      +E+   F+++  +     +F  +++++    S +  +GR+IH 
Sbjct: 307 GISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHC 366

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I +G + +    NALVDMYAK    ++A  +F +I     V W A+I+  V    ++ 
Sbjct: 367 QAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEE 426

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            + +F  M+ + +  +  T+ S L+ACA +    LGRQLH  LI+    S+   G  L+D
Sbjct: 427 GINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLD 486

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG M +A   F  MPE+N ++WN +IS + QNG                       
Sbjct: 487 TYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN---------------------- 524

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              V  ++ SFQ +          +++ ++ D     S++ A   CG VE+A+  F   +
Sbjct: 525 ---VDGTLNSFQQM----------IQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571

Query: 361 AVDLVAC-----TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            +  V       TSM+    + G  +EA KL  EM      P   + SS+LN+C     +
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNSCRIHKNH 628

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           E  K+    +     + D     ++ N+YA  G  D+  +    + DRG+
Sbjct: 629 ELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGV 678



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 46/386 (11%)

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH------------------------- 273
           V+ + + G +  A  +F  MP KN I+ N++ISGH                         
Sbjct: 50  VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109

Query: 274 ------LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
                 LQ+    EA  L+  M R G+  D  TL T+L      +   V  Q+H   +K 
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            +E +  + NSL+DAY K   +  A ++FK     D V   S++T Y+  GL EEA++L+
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           LE+ +  I P  F  ++LL+A   L   + G+QVH  ++K  F+ + F GN+L++ Y+K 
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM----LEDGVLPNHITL 503
             +D+  + F E+P+   +S++ +I   A +G+ KE+  +F ++     +    P   TL
Sbjct: 290 DQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP-FATL 348

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           +S+  A +   L    + H +++      +   E+   ++D+  +    +EA ++ D + 
Sbjct: 349 LSI--ATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEAQKIFDNIA 404

Query: 564 FQANASVWGALLGAARIYKNVEVGQH 589
            ++    W A++ A      V+ G+H
Sbjct: 405 CKSTVP-WTAMISAY-----VQKGKH 424


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 287/775 (37%), Positives = 450/775 (58%), Gaps = 9/775 (1%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
            V++ C    D  +G Q+ G V+ +G D+    VANSL+ M+    +  ++ R+F+ + ER
Sbjct: 356  VIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQER 415

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
              +SWNS+ +   H    EE++  F  M  +  + +  ++S+++ AC  +     GR +H
Sbjct: 416  DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLH 475

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            G   K G +S++   N+L+ MYA+ G+ EDA  VF  +   D++SWN+++A  V      
Sbjct: 476  GLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYS 535

Query: 180  WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             A+ L  +M  +    N  T+T+AL AC  +E  ++   +H  +I   +  + I+G  LV
Sbjct: 536  HAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLV 592

Query: 240  DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
             MY K G MDEA+ +  +MPE++++ WN +I GH  +         F  M REG+  +  
Sbjct: 593  TMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYI 652

Query: 300  TLSTVLKSVASFQAI---GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            T+  +L +  S   +   G+   +HA  V   FE D Y+ +SLI  Y +CG +  +  IF
Sbjct: 653  TIVNLLGTCMSPDYLLKHGM--PIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIF 710

Query: 357  KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
               +  +     ++ +A A +G GEEALK    M++  ++ D F  S  L    NL+  +
Sbjct: 711  DVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLD 770

Query: 417  QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            +G+Q+H  IIK GF  D +  N+ ++MY KCG IDD  R       R   SW+ +I  LA
Sbjct: 771  EGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALA 830

Query: 477  QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            +HG  ++A + F +ML+ G+ P+H+T VS+L AC+H GLV E   +F SM  +FG+    
Sbjct: 831  RHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAI 890

Query: 537  EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
            EH  C+ID+LGR+G+  EA   +D MP   N  VW +LL A +++ N+E+G+ AA+ LF 
Sbjct: 891  EHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFE 950

Query: 597  IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            +     S +VL SN+ AS   W +V  VR+ M+   LKK+P  SWI++K+KV TF +GD+
Sbjct: 951  LNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQ 1010

Query: 657  SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
             H +S +IYAKL+E+  +  + G++P     L D +E +KE  L++HSE++A+AFGLI +
Sbjct: 1011 FHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINS 1070

Query: 717  PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              G+ +R+ KNLR+C DCH+ F+ +SKIV R+I+VRD  RFHHF  G CSC  YW
Sbjct: 1071 AEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 291/571 (50%), Gaps = 6/571 (1%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           +G  +H + V      + F  N+LV MY+K G+   ++ +FD + +R+  SWN++ S +V
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIHGYSIKLGYDSDM 131
              +  +A+ FF  M  +G+ P+ + ++SM+ AC  SG    G R+IHGY +K G  S++
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F   +L+  Y   G++ +A  +F++IE P+IVSW +++     + H    L +++ ++ +
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGVGLVDMYAKCGSMDE 250
            +     T  + ++ C     K +G Q+   +IK  + +  + V   L+ M+    S++E
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F+ M E++ I+WN +I+    NG   E+   F WM R     D  T+S +L +  S
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
            Q +   + +H L  K+  ES+  + NSL+  Y + G  EDA  +F    A DL++  SM
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           + ++ + G    A+ L +EM       +    ++ L+AC NL   E+ K VH  +I F  
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL---EKLKIVHAFVIHFAV 581

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             +   GN+LV MY K G +D+A +    +P+R +V+W+A+IGG A        +Q F  
Sbjct: 582 HHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNL 641

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M  +G+L N+IT+V++L  C     + +      +     G +      + +I +  + G
Sbjct: 642 MRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCG 701

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIY 581
               +  + D +    N+S W A+  A   Y
Sbjct: 702 DLNTSSYIFDVLA-NKNSSTWNAIFSANAHY 731



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 282/564 (50%), Gaps = 7/564 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+HG VV  G  S+ FV  SL+  Y   G+  ++ +LF+ I E ++VSW SL  CY    
Sbjct: 270 QIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNG 329

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS-A 134
             +E +  ++ +  +G+     +++++I  C   GD  +G +I G  IK G D+   S A
Sbjct: 330 HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           N+L+ M+    ++E+A  VF +++  D +SWN++I     +   + +L  F  M+ +   
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
            +  T ++ L AC   +  + GR LH  + K  ++S+  V   L+ MYA+ GS ++A ++
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           FH MP ++LI+WN +++ H+++G    A  L   M +     +  T +T L +  + + +
Sbjct: 510 FHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL 569

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              K VHA  +  A   +  I N+L+  YGK G +++A K+ K     D+V   ++I  +
Sbjct: 570 ---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGH 626

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSD 433
           A        ++ +  M+   +  +     +LL  C +     + G  +H HI+  GF  D
Sbjct: 627 ADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELD 686

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           T+  +SL+ MYA+CG ++ +   F  + ++   +W+A+    A +G G+EAL+   +M  
Sbjct: 687 TYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRN 746

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           DGV  +  +    L    +  ++ E +    S   K G +  +      +D+ G+ G+  
Sbjct: 747 DGVDLDQFSFSVALATIGNLTVLDEGQ-QLHSWIIKLGFELDEYVLNATMDMYGKCGEID 805

Query: 554 EAMELVDTMPFQANASVWGALLGA 577
           +   ++     ++  S W  L+ A
Sbjct: 806 DVFRILPIPKIRSKRS-WNILISA 828


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 289/776 (37%), Positives = 444/776 (57%), Gaps = 6/776 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC    D+ LG  VH + +  G  SD FV N+L+ MY KCG    + ++F+ +  R+
Sbjct: 201 VAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRN 260

Query: 61  VVSWNS-LFSCYVHCDFLEEAVCFFKEMVLS---GIRPNEFSLSSMINACAGSGDSLLGR 116
           +VSWNS +++C  +  F  E    FK +++S   G+ P+  ++ ++I ACA  G+  +G 
Sbjct: 261 LVSWNSVMYACSENGGF-GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM 319

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HG + KLG   ++   N+LVDMY+K G L +A A+F      ++VSWN +I G     
Sbjct: 320 VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEG 379

Query: 177 HNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                 +L Q+M+  E +  N  T  + L AC+G       +++H    +     D +V 
Sbjct: 380 DFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVA 439

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
              V  YAKC S+D A  +F  M  K + +WN +I  H QNG   ++  LF  M   G+ 
Sbjct: 440 NAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMD 499

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D+ T+ ++L + A  + +   K++H   ++   E D++I  SL+  Y +C  +     I
Sbjct: 500 PDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLI 559

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F +     LV    MIT ++Q  L  EAL  + +M    I P     + +L AC+ +SA 
Sbjct: 560 FDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSAL 619

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
             GK+VH   +K     D F   +L++MYAKCG ++ +   F  + ++    W+ +I G 
Sbjct: 620 RLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGY 679

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
             HG G +A+++F  M   G  P+  T + VL ACNHAGLV E   +   M+  +G++P 
Sbjct: 680 GIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPK 739

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYAC++D+LGRAG+  EA++LV+ MP + ++ +W +LL + R Y ++E+G+  ++ L 
Sbjct: 740 LEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLL 799

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP K+  +VLLSN+YA  G WD V KVR+ MK+N L K+ G SWIE+   VY F V D
Sbjct: 800 ELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSD 859

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            S + SK+I     ++   ++K GY P     LH++EE  K ++L  HSEKLA++FGL+ 
Sbjct: 860 GSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLN 919

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T  G T+RV KNLRICVDCH + + +SK+V R+IIVRD  RFHHF+NG C+CG +W
Sbjct: 920 TAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 175/587 (29%), Positives = 306/587 (52%), Gaps = 8/587 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFT-GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+AC   K++ +G +VH +V  +    +D  ++  ++ MY+ CG+  DSR +FDA  E+
Sbjct: 98  LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +  +N+L S Y       +A+  F E++  + + P+ F+L  +  ACAG  D  LG  +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K G  SD F  NAL+ MY K G +E AV VF+ + + ++VSWN+V+  C  +   
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 179 DWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                +F+++  SE   + P++ T  + + ACA +    +G  +H    K+ I  +  V 
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGV 294
             LVDMY+KCG + EAR +F +   KN+++WN +I G+ + G       L   M R E V
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             ++ T+  VL + +    +   K++H  + +  F  D+ + N+ + AY KC  ++ A +
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAER 457

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F       + +  ++I A+AQ G   ++L L+L M D  ++PD F   SLL ACA L  
Sbjct: 458 VFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKF 517

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              GK++H  +++ G   D F G SL+++Y +C S+      F ++ ++ +V W+ MI G
Sbjct: 518 LRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITG 577

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            +Q+    EAL  F QML  G+ P  I +  VL AC+    +   K    S   K  +  
Sbjct: 578 FSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGK-EVHSFALKAHLSE 636

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
                  +ID+  + G  +++  + D +  + + +VW  ++    I+
Sbjct: 637 DAFVTCALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGYGIH 682


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/697 (39%), Positives = 420/697 (60%), Gaps = 4/697 (0%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L  A+  F  M  +G  P   + +S++  CA  GD   GR +H      G DS+  +A A
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INP 195
           L +MYAK     DA  VF  +   D V+WNA++AG   +     A+++  +M+  E   P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T  S L ACA        R+ H   I+  ++    V   ++D Y KCG +  AR++F
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVF 219

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MP KN ++WN +I G+ QNG   EA +LF  M  EGV     ++   L++      + 
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
              +VH L V+   +S+  ++N+LI  Y KC  V+ A  +F E      V+  +MI   A
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G  E+A++L+  MQ   + PDSF   S++ A A++S   Q + +H + I+     D +
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
              +L++MYAKCG ++ A   F+   +R +++W+AMI G   HG GK A+++F +M   G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           ++PN  T +SVL AC+HAGLV E + +F SM++ +G++P  EHY  M+D+LGRAGK  EA
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
              +  MP     SV+GA+LGA +++KNVE+ + +A+ +F + P++   HVLL+NIYA+A
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANA 579

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            MW +VA+VR  M+ N L+K PG S I++K++++TF  G  +H ++KEIY++L ++ + +
Sbjct: 580 SMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEI 639

Query: 676 NKAGYVPMVETD-LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
              GYVP  +TD +HDVE+  K QLL  HSEKLA+AFGLI T PG TI++KKNLR+C DC
Sbjct: 640 KAVGYVP--DTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDC 697

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + + IS +  REII+RD+ RFHHF++G CSCG YW
Sbjct: 698 HNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 249/485 (51%), Gaps = 11/485 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C ++ DL  G  VH  +   G DS+   A +L  MYAKC    D+RR+FD +P R 
Sbjct: 65  LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL-----SGIRPNEFSLSSMINACAGSGDSLLG 115
            V+WN+L + Y        A+    EMV+      G RP+  +L S++ ACA +      
Sbjct: 125 RVAWNALVAGYARNGLARMAM----EMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R+ H ++I+ G +  +  A A++D Y K G++  A  VF  +   + VSWNA+I G   +
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             +  AL LF +M    ++    +  +AL+AC  +   + G ++H  L+++ + S+  V 
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MY+KC  +D A  +F  +  +  ++WN +I G  QNG   +A  LF  M  E V 
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  TL +V+ ++A        + +H  S++   + D Y++ +LID Y KCG V  A  +
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F  +    ++   +MI  Y   G G+ A++L+ EM+   I P+     S+L+AC++    
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480

Query: 416 EQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
           ++G++    + + +G         ++V++  + G +D+A     ++P D G+  + AM+G
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540

Query: 474 GLAQH 478
               H
Sbjct: 541 ACKLH 545


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/717 (37%), Positives = 429/717 (59%), Gaps = 36/717 (5%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           ++ S   P  F  +++INA +  G+    R +     +     + FS N ++  Y+K G+
Sbjct: 31  IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQ----PNSFSWNTMLSAYSKSGD 86

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALK 205
           L     +F  + + D VSWN++I+G V +     A+K +  M K   +N N  T+++ L 
Sbjct: 87  LSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLL 146

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK--------------------- 244
             +     +LGRQ+H  ++K    +   VG  LVDMYAK                     
Sbjct: 147 LVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVM 206

Query: 245 ----------CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
                      G + +++ +FH M E++ I+W  +I+G +QNG + EA  LF  M +EG+
Sbjct: 207 YNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGM 266

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             DQ T  +VL +    +A+   K++H L +++ +  + ++ ++L+D Y KC  V  A  
Sbjct: 267 AMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEA 326

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +FK  +  ++V+ T+M+  Y Q G  EEA++++ +MQ   I PD F   S++++CANL++
Sbjct: 327 VFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLAS 386

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            E+G Q H   +  G +S     N+L+ +Y KCGSI+D+++ F E+  R  VSW+A++ G
Sbjct: 387 LEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSG 446

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            AQ G+  E + +F +ML  G+ P+ +T ++VL AC+ AGLV   + +FESM K  GI P
Sbjct: 447 YAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIP 506

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             +HY CMID+ GRAG+ +EA   ++ MPF  ++  W  LL + R+Y N E+G+ AAE L
Sbjct: 507 FSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESL 566

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             ++P+  + ++LLS+IYA+ G W NVA++RR M++   +KEPG SWI+ K KVY F+  
Sbjct: 567 LELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSAD 626

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D+S   S +IYA+L++++  + + GYVP   + LHDVE+SEK ++L HHSEKLA+AFGL+
Sbjct: 627 DQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLL 686

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             P G  IRV KNLR+C DCH + ++ISKI  REI+VRD  RFH F++G+CSCG +W
Sbjct: 687 FIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 248/485 (51%), Gaps = 34/485 (7%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           + F  N+++  Y+K G+    + +F  +P R  VSWNSL S YV    + EAV  +  M+
Sbjct: 70  NSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM 129

Query: 89  LSGI-RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
             G+   N  + S+M+   +  G   LGR+IHG  +K G+ + +F  ++LVDMYAK+G +
Sbjct: 130 KDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLV 189

Query: 148 EDAVAVFKDIEHPDIV-------------------------------SWNAVIAGCVLHE 176
             A  VF +++  ++V                               SW  +I G + + 
Sbjct: 190 SVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNG 249

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A+ LF+ M+   +  + +T+ S L AC G+   + G+++H  +I+     +  VG 
Sbjct: 250 LEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGS 309

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMY KC S+  A  +F  M  KN+++W  ++ G+ QNG   EA  +F  M R G+  
Sbjct: 310 ALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEP 369

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  TL +V+ S A+  ++    Q H  ++ +   S   + N+LI  YGKCG +ED+ ++F
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLF 429

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E S  D V+ T++++ YAQFG   E + L+  M  + + PD+    ++L+AC+     E
Sbjct: 430 DEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVE 489

Query: 417 QGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           +G+Q    ++K  G +  +     +++++ + G +++A    +++P     + W+ ++  
Sbjct: 490 RGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSS 549

Query: 475 LAQHG 479
              +G
Sbjct: 550 CRLYG 554



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 226/471 (47%), Gaps = 69/471 (14%)

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL- 263
           K C     +   ++LHC +IK     +  +   L++ Y+K G++  AR +F  MP+ N  
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 264 ------------------------------IAWNIVISGHLQNGGDMEAASLFPWMYREG 293
                                         ++WN +ISG++  G  +EA   +  M ++G
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 294 V-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK------- 345
           V   ++ T ST+L  V+S   + + +Q+H   VK  F +  ++ +SL+D Y K       
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192

Query: 346 ------------------------CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
                                    G V+D+ ++F      D ++ T+MIT   Q GL  
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EA+ L+ +M+   +  D +   S+L AC  L A ++GK++H  II+ G+  + F G++LV
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MY KC S+  A+  F  + ++ +VSW+AM+ G  Q+G  +EA+++F  M  +G+ P+  
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372

Query: 502 TLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           TL SV+ +C N A L   A+ H +++    G+         +I + G+ G  +++ +L D
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVS--GLISFITVSNALITLYGKCGSIEDSNQLFD 430

Query: 561 TMPFQANASVWGALL-GAARIYKNVEVGQHAAEMLF-AIEPEKSSTHVLLS 609
            M F+   S W AL+ G A+  K  E       ML   ++P+  +   +LS
Sbjct: 431 EMSFRDEVS-WTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLS 480



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 217/435 (49%), Gaps = 44/435 (10%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------NFI---------- 47
           LG Q+HG +V  GF +  FV +SLV MYAK G               N +          
Sbjct: 156 LGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLL 215

Query: 48  ------DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSS 101
                 DS+RLF  + ER  +SW ++ +  +      EA+  F++M   G+  ++++  S
Sbjct: 216 RSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGS 275

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++ AC G      G++IH   I+ GY+ ++F  +ALVDMY K  ++  A AVFK + + +
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKN 335

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +VSW A++ G   +  ++ A+++F  M+ + I P+ FT  S + +CA +   E G Q HC
Sbjct: 336 VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHC 395

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             +   + S   V   L+ +Y KCGS++++  +F  M  ++ ++W  ++SG+ Q G   E
Sbjct: 396 QALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANE 455

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK----TAFESDDYIVN 337
              LF  M  +G+  D  T   VL + +    +   +Q     +K      F SD Y   
Sbjct: 456 TIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPF-SDHY--T 512

Query: 338 SLIDAYGKCGHVEDAVK-IFKESSAVDLVACTSMITAYAQFG---LGEEALKLYLEMQDR 393
            +ID +G+ G +E+A   I K   + D +   +++++   +G   +G+ A +  LE+  +
Sbjct: 513 CMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQ 572

Query: 394 EINPDSFVCSSLLNA 408
             NP  ++  S + A
Sbjct: 573 --NPAGYILLSSIYA 585



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 150/277 (54%), Gaps = 10/277 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC   + L  G ++H +++ +G++ + FV ++LV MY KC +   +  +F  +  ++
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKN 335

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++   Y    F EEAV  F +M  +GI P++F+L S+I++CA       G + H 
Sbjct: 336 VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHC 395

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G  S +  +NAL+ +Y K G++ED+  +F ++   D VSW A+++G       + 
Sbjct: 396 QALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANE 455

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M    + P+  T+ + L AC+   L E G+Q   S+    +K   I+      
Sbjct: 456 TIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESM----LKDHGIIPFSDHY 511

Query: 238 --LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
             ++D++ + G ++EA+   + MP   + I W  ++S
Sbjct: 512 TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/697 (39%), Positives = 420/697 (60%), Gaps = 4/697 (0%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L  A+  F  M  +G  P   + +S++  CA  GD   GR +H      G DS+  +A A
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INP 195
           L +MYAK     DA  VF  +   D V+WNA++AG   +     A+++  +M+  E   P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T  S L ACA        R+ H   I+  ++    V   ++D Y KCG +  AR++F
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVF 219

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MP KN ++WN +I G+ QNG   EA +LF  M  EGV     ++   L++      + 
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
              +VH L V+   +S+  ++N+LI  Y KC  V+ A  +F E      V+  +MI   A
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G  E+A++L+  MQ   + PDSF   S++ A A++S   Q + +H + I+     D +
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
              +L++MYAKCG ++ A   F+   +R +++W+AMI G   HG GK A+++F +M   G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           ++PN  T +SVL AC+HAGLV E + +F SM++ +G++P  EHY  M+D+LGRAGK  EA
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
              +  MP     SV+GA+LGA +++KNVE+ + +A+ +F + P++   HVLL+NIYA+A
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANA 579

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            MW +VA+VR  M+ N L+K PG S I++K++++TF  G  +H ++KEIY++L ++ + +
Sbjct: 580 SMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEI 639

Query: 676 NKAGYVPMVETD-LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
              GYVP  +TD +HDVE+  K QLL  HSEKLA+AFGLI T PG TI++KKNLR+C DC
Sbjct: 640 KAVGYVP--DTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDC 697

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + + IS +  REII+RD+ RFHHF++G CSCG YW
Sbjct: 698 HNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 249/485 (51%), Gaps = 11/485 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C ++ DL  G  VH  +   G DS+   A +L  MYAKC    D+RR+FD +P R 
Sbjct: 65  LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL-----SGIRPNEFSLSSMINACAGSGDSLLG 115
            V+WN+L + Y        A+    EMV+      G RP+  +L S++ ACA +      
Sbjct: 125 RVAWNALVAGYARNGLARMAM----EMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R+ H ++I+ G +  +  A A++D Y K G++  A  VF  +   + VSWNA+I G   +
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             +  AL LF +M    ++    +  +AL+AC  +   + G ++H  L+++ + S+  V 
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MY+KC  +D A  +F  +  +  ++WN +I G  QNG   +A  LF  M  E V 
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  TL +V+ ++A        + +H  S++   + D Y++ +LID Y KCG V  A  +
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F  +    ++   +MI  Y   G G+ A++L+ EM+   I P+     S+L+AC++    
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480

Query: 416 EQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
           ++G++    + + +G         ++V++  + G +D+A     ++P D G+  + AM+G
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540

Query: 474 GLAQH 478
               H
Sbjct: 541 ACKLH 545


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/808 (35%), Positives = 453/808 (56%), Gaps = 62/808 (7%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           + S + +   +V  Y  CG   D+  + + +     V WN L   ++    L+ A+    
Sbjct: 79  YVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSC 138

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+ +G +P+ F+L   + AC        GR +HG     G++S++F  NALV MY++ G
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198

Query: 146 NLEDAVAVFKDIEHP---DIVSWNAVIAGCVLHEHNDWALKLFQQM------KSSEINPN 196
           +LEDA  VF +I      D++SWN+++A  V   +   AL+LF +M      K++    +
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           + +  + L ACA ++     +++H   I+    +D  V   L+D YAKCGSM++A  +F+
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV------------ 304
           +M  K++++WN +++G+ Q+G    A  LF  M +E +  D  T S V            
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378

Query: 305 -----------------------LKSVASFQAIGVCKQVHALSVKTAFESDDY------- 334
                                  L + AS  A+    ++HA S+K    S D        
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438

Query: 335 -----IVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLY 387
                + N+LID Y KC   + A  IF        ++V  T MI  YAQ+G   +ALK++
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498

Query: 388 LEMQDRE--INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT--FAGNSLVNM 443
            EM  +   + P+++  S +L ACA+L+A   GKQ+H ++ +      +  F  N L++M
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDM 558

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y+KCG +D A   F  +P R  VSW++M+ G   HGRGKEAL +F +M + G +P+ I+ 
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           + +L AC+H+G+V +  ++F+ M + + +    EHYAC+ID+L R G+  +A + +  MP
Sbjct: 619 LVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMP 678

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            + +A +W ALL A R++ NVE+ ++A   L  ++ E   ++ L+SNIYA+A  W +VA+
Sbjct: 679 MEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVAR 738

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R+ MK + +KK PG SW++ K    +F VGDRSH  S EIY+ L+ +   +   GYVP 
Sbjct: 739 IRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPE 798

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
               LHDV++ EK  LL  HSEKLA+A+GL+ T PG  IR+ KNLR+C DCH++F +ISK
Sbjct: 799 TNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISK 858

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IV  EIIVRD +RFHHF+NGSCSCGGYW
Sbjct: 859 IVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 260/544 (47%), Gaps = 70/544 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS- 60
           LKAC        G  +HG++   GF+S+ FV N+LV MY++CG+  D+  +FD I  +  
Sbjct: 156 LKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI 215

Query: 61  --VVSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGDS 112
             V+SWNS+ + +V       A+  F EM +      +  R +  S+ +++ ACA     
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
              ++IH Y+I+ G  +D F  NAL+D YAK G++ DAV VF  +E  D+VSWNA++ G 
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335

Query: 173 VLHEHNDWALKLFQQMKSSEI-----------------------------------NPNM 197
               +   A +LF+ M+   I                                    PN 
Sbjct: 336 TQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNS 395

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKS------------DPIVGVGLVDMYAKC 245
            T  S L ACA +     G ++H   +K  + S            D +V   L+DMY+KC
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455

Query: 246 GSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTL 301
            S   AR IF  +P  E+N++ W ++I G+ Q G   +A  +F  M  +   V  +  T+
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTI 515

Query: 302 STVLKSVASFQAIGVCKQVHALSVK-TAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKES 359
           S +L + A   A+ + KQ+HA   +   +E   Y V N LID Y KCG V+ A  +F   
Sbjct: 516 SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM 575

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+ TSM++ Y   G G+EAL ++ +MQ     PD      LL AC++    +QG 
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL 635

Query: 420 QVHVHIIKFGFMSDTFAGNS----LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
             +  I++  +  D  A       ++++ A+CG +D A +   E+P +   V W A++  
Sbjct: 636 N-YFDIMRRDY--DVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692

Query: 475 LAQH 478
              H
Sbjct: 693 CRVH 696



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 215/454 (47%), Gaps = 68/454 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S K L    ++H   +  G  +D FV N+L+  YAKCG+  D+ ++F+ +  + 
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 61  VVSWNSLFSCY--------------------VHCDFL---------------EEAVCFFK 85
           VVSWN++ + Y                    +  D +               +EA+  F+
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK------------LGYDSDMFS 133
           +M+L G  PN  ++ S+++ACA  G    G +IH YS+K             G   D+  
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444

Query: 134 ANALVDMYAKVGNLEDAVAVFKDI--EHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--K 189
            NAL+DMY+K  + + A ++F  I     ++V+W  +I G   +  ++ ALK+F +M  K
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--LVDMYAKCGS 247
              + PN +T +  L ACA +    +G+Q+H  + +       +  V   L+DMY+KCG 
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +D AR +F  MP++N ++W  ++SG+  +G   EA  +F  M + G   D  +   +L +
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNS------LIDAYGKCGHVEDAVKIFK---- 357
            +     G+  Q   L+       D  +V S      +ID   +CG ++ A K  +    
Sbjct: 625 CSHS---GMVDQ--GLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPM 679

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           E SAV  VA  S    ++   L E AL   + M+
Sbjct: 680 EPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 19/261 (7%)

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           ++ S   +   ++ +Y  CG  +DA+ + +  +    V    ++  + + G  + A+ + 
Sbjct: 78  SYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVS 137

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             M      PD F     L AC  L +Y  G+ +H  I   GF S+ F  N+LV MY++C
Sbjct: 138 CRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRC 197

Query: 448 GSIDDADRAFSEIPDRGI---VSWSAMIGGLAQHGRGKEALQMFGQM------LEDGVLP 498
           GS++DA   F EI  +GI   +SW++++    +    + AL++F +M             
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERS 257

Query: 499 NHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQE 554
           + I++V++L AC     + + K  H +      F      + + C  +ID   + G   +
Sbjct: 258 DIISIVNILPACASLKALPQIKEIHSYAIRNGTFA-----DAFVCNALIDTYAKCGSMND 312

Query: 555 AMELVDTMPFQANASVWGALL 575
           A+++ + M F+   S W A++
Sbjct: 313 AVKVFNVMEFKDVVS-WNAMV 332


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/772 (35%), Positives = 448/772 (58%), Gaps = 1/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K L  G +V   +   GF  D  + + L +MY  CG+  ++ R+FD +    
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WN L +          ++  FK+M+ SG+  + ++ S +  + +       G ++HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G+       N+LV  Y K   ++ A  VF ++   D++SWN++I G V +   + 
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F QM  S I  ++ T  S    CA   L  LGR +H   +K     +      L+D
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG +D A+ +F  M +++++++  +I+G+ + G   EA  LF  M  EG+  D  T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++ VL   A ++ +   K+VH    +     D ++ N+L+D Y KCG +++A  +F E  
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
             D+++  ++I  Y++     EAL L+ L ++++  +PD    + +L ACA+LSA+++G+
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H +I++ G+ SD    NSLV+MYAKCG++  A   F +I  + +VSW+ MI G   HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GKEA+ +F QM + G+  + I+ VS+L AC+H+GLV E    F  M  +  I+P  EHY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+L R G   +A   ++ MP   +A++WGALL   RI+ +V++ +  AE +F +EP
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E +  +VL++NIYA A  W+ V ++R+ +    L+K PG SWIE+K +V  F  GD S+ 
Sbjct: 700 ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            ++ I A L +V   + + GY P+ +  L D EE EKE+ L  HSEKLA+A G+I++  G
Sbjct: 760 ETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IRV KNLR+C DCH   +F+SK+  REI++RD NRFH F++G CSC G+W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 251/468 (53%), Gaps = 13/468 (2%)

Query: 47  IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG---IRPNEFSLSSMI 103
           +DS   FD    RSV   N+    +     LE AV   K + +SG   I P   +L S++
Sbjct: 51  VDSITTFD----RSVTDANTQLRRFCESGNLENAV---KLLCVSGKWDIDPR--TLCSVL 101

Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
             CA S     G+++  +    G+  D    + L  MY   G+L++A  VF +++    +
Sbjct: 102 QLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKAL 161

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
            WN ++           ++ LF++M SS +  + +T++   K+ + +     G QLH  +
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221

Query: 224 IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
           +K        VG  LV  Y K   +D AR +F  M E+++I+WN +I+G++ NG   +  
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
           S+F  M   G+  D  T+ +V    A  + I + + VH++ VK  F  +D   N+L+D Y
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            KCG ++ A  +F+E S   +V+ TSMI  YA+ GL  EA+KL+ EM++  I+PD +  +
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           ++LN CA     ++GK+VH  I +     D F  N+L++MYAKCGS+ +A+  FSE+  +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL-PNHITLVSVLCAC 510
            I+SW+ +IGG +++    EAL +F  +LE+    P+  T+  VL AC
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 153/338 (45%), Gaps = 3/338 (0%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  TL +VL+  A  +++   K+V        F  D  + + L   Y  CG +++A ++F
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E      +    ++   A+ G    ++ L+ +M    +  DS+  S +  + ++L +  
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+Q+H  I+K GF      GNSLV  Y K   +D A + F E+ +R ++SW+++I G  
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            +G  ++ L +F QML  G+  +  T+VSV   C  + L++  +    S+  K       
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR-AVHSIGVKACFSRED 331

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM-LF 595
                ++D+  + G    A  +   M  ++  S    + G AR     E  +   EM   
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
            I P+  +   +L N  A   + D   +V  ++K+N L
Sbjct: 392 GISPDVYTVTAVL-NCCARYRLLDEGKRVHEWIKENDL 428


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/710 (38%), Positives = 428/710 (60%), Gaps = 36/710 (5%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  F  +++IN     GD    R +  +  +     ++FS N L+  Y+K+G L+D   V
Sbjct: 38  PETFLYNNLINTYGKLGDLKNARNVFDHIPQ----PNLFSWNTLLSAYSKLGYLQDMQRV 93

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMEL 212
           F  + + D+VSWN++++G   +     +++++  M K   +N N  T+++ L   +    
Sbjct: 94  FDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF 153

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL--------- 263
            +LGRQ+H  + K   +S   VG  LVDMYAK G +++A  IF  +PEKN+         
Sbjct: 154 VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG 213

Query: 264 ----------------------IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
                                 I+W  +I+G  QNG   EA   F  M  EG   DQ T 
Sbjct: 214 LLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTF 273

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +VL +   F A+   KQ+HA  ++T ++ + ++ ++L+D Y KC +V+ A  +F++   
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRH 333

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++++ T+M+  Y Q G  EEA++++ +MQ  EI+PD F   S++++CANL++ E+G Q 
Sbjct: 334 KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQF 393

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +  G +      N+L+ +Y KCGS++ A + F E+  R  VSW+A++ G AQ G+ 
Sbjct: 394 HGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKA 453

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            E + +F  ML  G++P+ +T V VL AC+ AGLV +  H+FE M K+  I P+ +HY C
Sbjct: 454 NETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTC 513

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+L RAG+ +EA   ++ MPF  +A  W  LL + R+  N+E+G+ AAE L  +EP+ 
Sbjct: 514 MIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQN 573

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            ++++LLS+IYA+ G WD+VAK+R+ M++  +KKEPG SWI+ K+KV+ F+  DRS   S
Sbjct: 574 PASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFS 633

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            +IYAKL+ +   + + GYVP +   LHDVE+SEK ++L HHSEKLA+AFGL+  P G  
Sbjct: 634 DQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQ 693

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IRV KNLR+C DCH + ++IS+I  REI+VRD  RFH F++G CSCG +W
Sbjct: 694 IRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 31/328 (9%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           LG Q+HG +   G+ S  FV + LV MYAK G   D+ R+F+ IPE+++V +N++ +  +
Sbjct: 156 LGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLL 215

Query: 73  HCDFL-------------------------------EEAVCFFKEMVLSGIRPNEFSLSS 101
            C F+                               +EAV  FKEM + G   ++F+  S
Sbjct: 216 RCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGS 275

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++ AC G      G++IH Y I+  Y  ++F  +AL+DMY K  N++ A AVF+ + H +
Sbjct: 276 VLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKN 335

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           ++SW A++ G   + +++ A+++F  M+ +EI+P+ FT  S + +CA +   E G Q H 
Sbjct: 336 VISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHG 395

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             +   +     V   L+ +Y KCGS++ A  +FH M  ++ ++W  ++SG+ Q G   E
Sbjct: 396 QALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANE 455

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVA 309
             SLF  M   G+  D  T   VL + +
Sbjct: 456 TISLFETMLAHGIVPDGVTFVGVLSACS 483



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 67/440 (15%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           YT+ALK C     +   ++LHC +I+     +  +   L++ Y K G +  AR +F  +P
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 260 EKNLIAWNIVIS-----GHLQ--------------------------NGGDMEAASLFPW 288
           + NL +WN ++S     G+LQ                          NG   E+  ++  
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 289 MYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
           M ++G V  ++ T ST+L   ++   + + +Q+H    K  ++S  ++ + L+D Y K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 348 HVEDAVKIFKESSAVDLV-------------------------------ACTSMITAYAQ 376
            + DA +IF+E    ++V                               + T++IT   Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GL +EA+  + EM       D F   S+L AC    A ++GKQ+H +II+  +  + F 
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           G++L++MY KC ++  A+  F ++  + ++SW+AM+ G  Q+G  +EA+++F  M  + +
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367

Query: 497 LPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            P+  TL SV+ +C N A L   A+ H +++    G+         +I + G+ G  + A
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGAQFHGQALAS--GLICFVTVSNALITLYGKCGSLEHA 425

Query: 556 MELVDTMPFQANASVWGALL 575
            +L   M  +   S W AL+
Sbjct: 426 HQLFHEMKIRDEVS-WTALV 444



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 143/279 (51%), Gaps = 2/279 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G Q+H  ++ T +  + FV ++L+ MY KC N   +  +F  +  ++
Sbjct: 276 VLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKN 335

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW ++   Y    + EEAV  F +M  + I P++F+L S+I++CA       G + HG
Sbjct: 336 VISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHG 395

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  +NAL+ +Y K G+LE A  +F +++  D VSW A+++G       + 
Sbjct: 396 QALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANE 455

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ-LHCSLIKMEIKSDPIVGVGLV 239
            + LF+ M +  I P+  T+   L AC+   L E G     C + +  I   P     ++
Sbjct: 456 TISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMI 515

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNG 277
           D+ ++ G ++EA+   + MP   + I W  ++S    NG
Sbjct: 516 DLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNG 554


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/756 (37%), Positives = 457/756 (60%), Gaps = 17/756 (2%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWNSLFSCYVHCD--FLEEAVCF 83
           ++ F  N ++  Y++ G    +  LF + P   R  V+W  +   +         +AV  
Sbjct: 64  NNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSL 123

Query: 84  FKEMVLSGIRPNEFSLSSMIN---ACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVD 139
           F++M+  G+ P+  ++++++N   A  G+  +++   +H +++KLG   S++   N L+D
Sbjct: 124 FRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLD 183

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
            Y K G L  A  VF+++ H D V++NA++ GC     +  AL LF  M+   +    FT
Sbjct: 184 AYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFT 243

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +++ L    G+    LGRQ+H  L+     S+  V   L+D Y+KC  +DE + +FH M 
Sbjct: 244 FSTVLTVATGVGDLCLGRQVH-GLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMI 302

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTL--STVLKSVASFQAIG 315
           E++ +++N++I+G+  N      AS+   ++RE   + FD+  L  +++L    S   IG
Sbjct: 303 ERDNVSYNVMIAGYAWN----RCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIG 358

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQ+HA  V     S+D + N+LID Y KCG ++ A   F   +    V+ T+MIT   
Sbjct: 359 IGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCV 418

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G  EEAL+L+  M+   ++PD    SS + A +NL+    G+Q+H ++I+ G MS  F
Sbjct: 419 QNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVF 478

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
           +G++L++MY KCG +D+A + F E+P+R  +SW+A+I   A +G+ K A++MF  ML  G
Sbjct: 479 SGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG 538

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
             P+ +T +SVL AC+H GL  E   +FE ME ++GI P +EHY+C+ID LGR G+F + 
Sbjct: 539 FKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKV 598

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            E++  MPF+ +  +W ++L + R + N ++ + AAE LF++    ++ +V+LSNI+A A
Sbjct: 599 QEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKA 658

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G W++ A V++ M+D  L+KE G SW+EVK KVY+F+  D+++    EI  +L+ +   +
Sbjct: 659 GKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEM 718

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
           +K GY P     L  V++  K + L +HSE+LA+AF LI TPPG  IRV KNL  CVDCH
Sbjct: 719 DKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCH 778

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++ + +SKIV+R+IIVRD +RFHHF++G CSCG YW
Sbjct: 779 SAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 211/465 (45%), Gaps = 35/465 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL   T   DL LG QVHG+V      S+ FV NSL+  Y+KC    + ++LF  + ER 
Sbjct: 247 VLTVATGVGDLCLGRQVHGLVA-RATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERD 305

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + + Y         +  F+EM            +S+++         +G++IH 
Sbjct: 306 NVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHA 365

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             + LG  S+    NAL+DMY+K G L+ A   F +      VSW A+I GCV +   + 
Sbjct: 366 QLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEE 425

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF  M+ + ++P+  T++S +KA + + +  LGRQLH  LI+    S    G  L+D
Sbjct: 426 ALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLD 485

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG +DEA   F  MPE+N I+WN VIS +   G    A  +F  M   G   D  T
Sbjct: 486 MYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVT 545

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +       C +         FE  +Y               E  +  +KE  
Sbjct: 546 FLSVLSACSHNGLAEECMKY--------FELMEY---------------EYGISPWKEHY 582

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           +        +I    + G  ++  ++  EM       D  + SS+L++C      +  + 
Sbjct: 583 SC-------VIDTLGRVGRFDKVQEMLGEM---PFEDDPIIWSSILHSCRTHGNQDLARV 632

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               +   G  +D      L N++AK G  +DA      + DRG+
Sbjct: 633 AAEKLFSMG-STDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGL 676


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 286/762 (37%), Positives = 445/762 (58%), Gaps = 6/762 (0%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           L  Q+H ++V +G     F++  L+  YA  G+   +R  FD I  + V +WNS+ S Y 
Sbjct: 58  LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117

Query: 73  HCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
                  AV CF + +  S ++ + ++   +I AC    D   GRK+H   +KLG++ D+
Sbjct: 118 RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDV 174

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           + A + +  Y++ G +  A  +F ++   DI +WNA+I+G  L+     AL++F +M+  
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFK 234

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            ++ +  T +S L  C  ++    G  +H   IK+ ++ D  V   L++MYAK G +  A
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             IF+ M  +++++WN +++   QN   + A  ++  M+  GV  D  TL ++    A  
Sbjct: 295 ETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAEL 354

Query: 312 QAIGVCKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
                 + +H    +   F  D  + N++ID Y K G ++ A K+F+     D+++  S+
Sbjct: 355 GNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSL 414

Query: 371 ITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           IT Y+Q GL  EA+ +Y  M+      P+     S+L A + L A +QG + H  +IK  
Sbjct: 415 ITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF 474

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D F    LV+MY KCG + DA   F E+P +  VSW+A+I     HG G +A+++F 
Sbjct: 475 LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFK 534

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +M  +GV P+HIT VS+L AC+H+GLV E +  F+ M++ +GI+P  +HY CM+D+ GRA
Sbjct: 535 EMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRA 594

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G  ++A   V  MP + + SVWGALLGA RI++NVE+ +  ++ L  +E E    +VLLS
Sbjct: 595 GHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLS 654

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA  G W+ V +VR   +D  LKK PG S IEV  K+  F  G+++H + +EIY++L 
Sbjct: 655 NIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELR 714

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            ++  +   GYVP     L DVE+ EKE +L  HSE+LA+AFG+I+TPP  T+++ KNLR
Sbjct: 715 NLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLR 774

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +C DCH + +FISKI  REIIVRD NRFHHF++G CSCG YW
Sbjct: 775 VCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 222/478 (46%), Gaps = 43/478 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C    D+  G+ +H   +  G + D FV N+L+ MYAK G    +  +F+ +  R 
Sbjct: 246 LLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRD 305

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNSL + +        A+  + +M   G+ P+  +L S+ +  A  G+ L  R IHG
Sbjct: 306 IVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHG 365

Query: 121 Y-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           + + +  +  D+   NA++DMYAK+G ++ A  VF+ +   D++SWN++I G   +   +
Sbjct: 366 FVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLAN 425

Query: 180 WALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A+ ++  M+  S   PN  T+ S L A + +   + G + H  LIK  +  D  V   L
Sbjct: 426 EAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCL 485

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMY KCG + +A  +F+ +P ++ ++WN +IS H  +G  ++A  LF  M  EGV  D 
Sbjct: 486 VDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDH 545

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T  ++L + +    +   +    L  +T            ++D +G+ GH+E A    K
Sbjct: 546 ITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVK 605

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                                             +  + PD  V  +LL AC      E 
Sbjct: 606 ----------------------------------NMPVRPDVSVWGALLGACRIHENVEL 631

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV-NMYAKCGSIDDADRAFSEIPDRGI---VSWSAM 471
            + V  H++K    S+      L+ N+YAK G  +  D   S   DRG+     WS++
Sbjct: 632 VRTVSDHLLKVE--SENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSI 687



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 12/268 (4%)

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + KQ+HAL V +      ++   LI+ Y   G +  A   F +    D+    SMI+A
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 374 YAQFGLGEEALKLYLE-MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           YA+ G    A+  + E +    +  D +    ++ AC NL   + G++VH  ++K GF  
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNL---DDGRKVHCLVLKLGFEC 172

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D +   S ++ Y++ G +  A   F  +  R I +W+AMI G   +G+  EAL++F +M 
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 493 EDGVLPNHITLVSVLCACNHA-GLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRA 549
              V  + +T+ S+L  C     +++    H  ++  K G++   + + C  +I++  + 
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAI--KLGLE--FDLFVCNALINMYAKF 288

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGA 577
           G+ + A  + + M  +   S W +LL A
Sbjct: 289 GELRSAETIFNQMKVRDIVS-WNSLLAA 315


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/739 (37%), Positives = 431/739 (58%), Gaps = 9/739 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY KCG+  D+  +F AI   + VSW  + + +       EA+ +++ MVL G+RP+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
               I  C+ S D   G+ +H   ++    + D+    AL+ MYA+  +LE A   F ++
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSE-INPNMFTYTSALKACAGMELKE 214
               +V+WNA+IAG   +  +  ALK++Q M  KS E + P+  T++SAL AC+ +    
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            GR++    +     SD IV   L++MY+KCGS++ AR +F  +  +++IAWN +ISG+ 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           + G   +A  LF  M       +  T   +L +  + + +   + +H    +  +ESD  
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 335 IVNSLIDAYGKCGH-VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           I N L++ Y KC   +E+A ++F+     D++    +I AY Q+G  ++AL ++ +MQ  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + P+    S++L+ACA L A  QGK VH  I      +D    NSL+NMY +CGS+DD 
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F+ I D+ +VSWS +I   AQHG  +  L+ F ++L++G+  + +T+VS L AC+H 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           G++ E    F SM    G+ P   H+ CM+D+L RAG+ + A  L+  MPF  +A  W +
Sbjct: 481 GMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPE-KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           LL   +++ + +     A+ LF +E E + ST  LLSN+YA AG WD+V K R       
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRA 597

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
            +K PG S+IE+ D V+ F  GD+SH   + I A++  +S  +  AGYVP +   LH+V+
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVK 657

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           E EKEQ+L +HSEKLA+A+GLI+TPPG  + + KNLR CVDCH + +FIS+IV R+I+VR
Sbjct: 658 EEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D  RFHHF NGSCSC  YW
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 271/496 (54%), Gaps = 7/496 (1%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           C+S KDL  G  +H +++ T   + D  +  +L+ MYA+C +   +R+ FD + ++++V+
Sbjct: 68  CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMV---LSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           WN+L + Y        A+  +++MV     G++P+  + SS + AC+  GD   GR+I  
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEA 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  GY SD    NAL++MY+K G+LE A  VF  +++ D+++WN +I+G         
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ+M  ++  PN+ T+   L AC  +E  E GR +H  + +   +SD ++G  L++
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLN 307

Query: 241 MYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MY KC  S++EAR +F  +  +++I WNI+I  ++Q G   +A  +F  M  E V  ++ 
Sbjct: 308 MYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS VL + A   A    K VHAL      ++D  + NSL++ Y +CG ++D V +F   
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               LV+ +++I AYAQ G     L+ + E+    +  D     S L+AC++    ++G 
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGV 487

Query: 420 QVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
           Q  + ++   G   D      +V++ ++ G ++ A+    ++P     V+W++++ G   
Sbjct: 488 QSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKL 547

Query: 478 HGRGKEALQMFGQMLE 493
           H   K A ++  ++ E
Sbjct: 548 HNDTKRAARVADKLFE 563



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 216/455 (47%), Gaps = 34/455 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+   D+  G ++    V +G+ SD  V N+L+ MY+KCG+   +R++FD +  R V
Sbjct: 170 LYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           ++WN++ S Y       +A+  F+ M  +  +PN  +   ++ AC    D   GR IH  
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289

Query: 122 SIKLGYDSDMFSANALVDMYAKV-GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             + GY+SD+   N L++MY K   +LE+A  VF+ +   D+++WN +I   V +     
Sbjct: 290 VKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKD 349

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F+QM+   + PN  T ++ L ACA +  K  G+ +H  +     K+D ++   L++
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMN 409

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY +CGS+D+   +F  + +K+L++W+ +I+ + Q+G        F  + +EG+  D  T
Sbjct: 410 MYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVT 469

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + + L + +           H   +K         V S +   G  G   D         
Sbjct: 470 MVSTLSACS-----------HGGMLKEG-------VQSFLSMVGDHGLAPDYRHFL---- 507

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                    M+   ++ G  E A  L   + D    PD+   +SLL+ C   +  ++  +
Sbjct: 508 --------CMVDLLSRAGRLEAAENL---IHDMPFLPDAVAWTSLLSGCKLHNDTKRAAR 556

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           V   + +     +      L N+YA+ G  DD  +
Sbjct: 557 VADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRK 591



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 151/276 (54%), Gaps = 5/276 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLFDAIPER 59
           +L ACT+ +DL  G  +H  V   G++SD  + N L+ MY KC + + ++R++F+ +  R
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTR 329

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            V++WN L   YV     ++A+  FK+M L  + PNE +LS++++ACA  G    G+ +H
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                    +D+   N+L++MY + G+L+D V VF  I    +VSW+ +IA    H H+ 
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELGRQLHCSLI-KMEIKSDPIVGVG 237
             L+ F ++    +  +  T  S L AC+ G  LKE G Q   S++    +  D    + 
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE-GVQSFLSMVGDHGLAPDYRHFLC 508

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +VD+ ++ G ++ A  + H MP   + +AW  ++SG
Sbjct: 509 MVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 8/215 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC        G  VH ++      +D  + NSL+ MY +CG+  D+  +F AI ++S
Sbjct: 372 VLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKS 431

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW++L + Y         +  F E++  G+  ++ ++ S ++AC+  G  +L   +  
Sbjct: 432 LVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGG--MLKEGVQS 489

Query: 121 YSIKL---GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLHE 176
           +   +   G   D      +VD+ ++ G LE A  +  D+   PD V+W ++++GC LH 
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549

Query: 177 HNDWALKLFQQM--KSSEINPNMFTYTSALKACAG 209
               A ++  ++    SE   +  T  S + A AG
Sbjct: 550 DTKRAARVADKLFELESEDEHSTVTLLSNVYAEAG 584


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/692 (38%), Positives = 435/692 (62%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK+C+S +D   G+Q+HG+ V  GFD D    ++L+ MYAKC     S + F ++PE++
Sbjct: 180 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKN 239

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++ +  V  D L   +  FKEM  +G+  ++ + +S+  +CAG     LG ++HG
Sbjct: 240 WVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHG 299

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + +D+    A +DMY K  NL DA  +F  + + ++ S+NA+I G    +    
Sbjct: 300 HALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIE 359

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F+ ++ S +  +  + + A +ACA ++    G Q+H   +K   +S+  V   ++D
Sbjct: 360 ALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 419

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ EA ++F  M  ++ ++WN +I+ H QNG + +  SLF WM + G+  D+ T
Sbjct: 420 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 479

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A +QA+    ++H   +K+    D ++  +LID Y KCG +E A K+    +
Sbjct: 480 YGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 539

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++I+ ++     EEA K + +M +  ++PD+F  +++L+ CANL   E GKQ
Sbjct: 540 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 599

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK    SD +  ++LV+MY+KCG++ D    F + P+R  V+W+AM+ G AQHG 
Sbjct: 600 IHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGL 659

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+EAL++F  M  + V PNH T ++VL AC H GLV +  H+F SM   +G+ P  EHY+
Sbjct: 660 GEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYS 719

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++DI+GR+G+  +A+EL++ MPF+A+A +W  LL   +I+ NVEV + AA  +  +EPE
Sbjct: 720 CVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPE 779

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+ +VLLSNIYA+AGMW+ V K+R+ M+ N LKKEPG SWIE+K +V+ F VGD++H R
Sbjct: 780 DSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPR 839

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           SKEIY  LD ++D +   GY+P  +  L+D E
Sbjct: 840 SKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 871



 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 184/607 (30%), Positives = 330/607 (54%), Gaps = 35/607 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           + + C+ +K L  G Q H  ++ T F    FV N L+ MY KC                 
Sbjct: 48  IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRD 107

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         G+   +++LFDA+PER VVSWNSL S Y+H     + +  F +M  
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGR 167

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G   +  + + ++ +C+   D   G +IHG ++K+G+D D+ + +AL+DMYAK   L+ 
Sbjct: 168 MGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDC 227

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           ++  F  +   + VSW+A+IAGCV ++     L+LF++M+ + +  +  T+ S  ++CAG
Sbjct: 228 SIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAG 287

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +    LG QLH   +K +  +D ++G   +DMY KC ++ +A+ +F+ +P  NL ++N +
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAI 347

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ ++   +EA  +F  + + G+G D+ +LS   ++ A  +      QVH LS+K+  
Sbjct: 348 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLC 407

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           +S+  + N+++D YGKCG + +A  +F+E  + D V+  ++I A+ Q G  E+ L L++ 
Sbjct: 408 QSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVW 467

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD F   S+L ACA   A   G ++H  IIK     D+F G +L++MY+KCG 
Sbjct: 468 MLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGM 527

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++ A++    + ++ +VSW+A+I G +   + +EA + F +MLE GV P++ T  ++L  
Sbjct: 528 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 587

Query: 510 CNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           C +   V   K  H + ++K+  +Q      + ++D+  + G  Q+   + +  P   + 
Sbjct: 588 CANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDF 644

Query: 569 SVWGALL 575
             W A++
Sbjct: 645 VTWNAMV 651



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 255/545 (46%), Gaps = 37/545 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + S +   C+       G++ H   I   +   +F  N L+ MY K  +LE A  VF  +
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP---------------------- 195
              D VSWNA++ G         A KLF  M   ++                        
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 196 ---------NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
                    +  T+   LK+C+ +E    G Q+H   +KM    D + G  L+DMYAKC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +D +   FH MPEKN ++W+ +I+G +QN        LF  M + GVG  Q+T ++V +
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S A   A+ +  Q+H  ++KT F +D  I  + +D Y KC ++ DA K+F      +L +
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             ++I  YA+   G EAL ++  +Q   +  D    S    ACA +    +G QVH   +
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 403

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K    S+    N++++MY KCG++ +A   F E+  R  VSW+A+I    Q+G  ++ L 
Sbjct: 404 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 463

Query: 487 MFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           +F  ML+ G+ P+  T  SVL AC     L    + H   ++ + G+         +ID+
Sbjct: 464 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG--IALIDM 521

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA-AEML-FAIEPEKSS 603
             + G  ++A +L D +  Q   S W A++    + K  E  Q   ++ML   ++P+  +
Sbjct: 522 YSKCGMMEKAEKLHDRLAEQTVVS-WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 580

Query: 604 THVLL 608
              +L
Sbjct: 581 YATIL 585



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 38/347 (10%)

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q+    +   + P+   +     + T S + +  +  +A+   KQ HA  + T F+  
Sbjct: 17  NFQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPT 76

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++ N LI  Y KC  +E A K+F      D V+  +M+  YA  G    A KL+  M +
Sbjct: 77  VFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPE 136

Query: 393 REINP-------------------------------DSFVCSSLLNACANLSAYEQGKQV 421
           R++                                 D    + +L +C++L  +  G Q+
Sbjct: 137 RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 196

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +K GF  D   G++L++MYAKC  +D + + F  +P++  VSWSA+I G  Q+   
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA---EAKHHFESMEKKFGIQPMQEH 538
           +  L++F +M + GV  +  T  SV  +C  AGL A    ++ H  +++  FG   +   
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSC--AGLSALRLGSQLHGHALKTDFGTDVVIG- 313

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
               +D+  +     +A +L +++P     S    ++G AR  K +E
Sbjct: 314 -TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIE 359


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/739 (37%), Positives = 430/739 (58%), Gaps = 9/739 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY KCG+  D+  +F AI   + VSW  + + +       EA+ +++ MVL G+RP+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
               I  C+ S D   G+ +H   ++    + D+    AL+ MYA+  +LE A   F ++
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSE-INPNMFTYTSALKACAGMELKE 214
               +V+WNA+IAG   +  +  ALK++Q M  KS E + P+  T++SAL AC  +    
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            GR++    +     SD IV   L++MY+KCGS++ AR +F  +  +++IAWN +ISG+ 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           + G   +A  LF  M       +  T   +L +  + + +   + +H    +  +ESD  
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 335 IVNSLIDAYGKCGH-VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           I N L++ Y KC   +E+A ++F+     D++    +I AY Q+G  ++AL ++ +MQ  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + P+    S++L+ACA L A  QGK VH  I      +D    NSL+NMY +CGS+DD 
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F+ I D+ +VSWS +I   AQHG  +  L+ F ++L++G+  + +T+VS L AC+H 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           G++ E    F SM    G+ P   H+ CM+D+L RAG+ + A  L+  MPF  +A  W +
Sbjct: 481 GMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPE-KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           LL   +++ + +     A+ LF +E E + ST  LLSN+YA AG WD+V K R       
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRA 597

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
            +K PG S+IE+ D V+ F  GD+SH   + I A++  +S  +  AGYVP +   LH+V+
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVK 657

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           E EKEQ+L +HSEKLA+A+GLI+TPPG  + + KNLR CVDCH + +FIS+IV R+I+VR
Sbjct: 658 EEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D  RFHHF NGSCSC  YW
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 270/496 (54%), Gaps = 7/496 (1%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           C+S KDL  G  +H +++ T   + D  +  +L+ MYA+C +   +R+ FD + ++++V+
Sbjct: 68  CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMV---LSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           WN+L + Y        A+  +++MV     G++P+  + SS + AC   GD   GR+I  
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEA 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  GY SD    NAL++MY+K G+LE A  VF  +++ D+++WN +I+G         
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ+M  ++  PN+ T+   L AC  +E  E GR +H  + +   +SD ++G  L++
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLN 307

Query: 241 MYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MY KC  S++EAR +F  M  +++I WNI+I  ++Q G   +A  +F  M  E V  ++ 
Sbjct: 308 MYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS VL + A   A    K VHAL      ++D  + NSL++ Y +CG ++D V +F   
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               LV+ +++I AYAQ G     L+ + E+    +  D     S L+AC++    ++G 
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGV 487

Query: 420 QVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
           Q  + ++   G   D      +V++ ++ G ++ A+    ++P     V+W++++ G   
Sbjct: 488 QTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKL 547

Query: 478 HGRGKEALQMFGQMLE 493
           H   K A ++  ++ E
Sbjct: 548 HNDTKRAARVADKLFE 563



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 216/455 (47%), Gaps = 34/455 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L ACT   D+  G ++    V +G+ SD  V N+L+ MY+KCG+   +R++FD +  R V
Sbjct: 170 LYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           ++WN++ S Y       +A+  F+ M  +  +PN  +   ++ AC    D   GR IH  
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289

Query: 122 SIKLGYDSDMFSANALVDMYAKV-GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             + GY+SD+   N L++MY K   +LE+A  VF+ +   D+++WN +I   V +     
Sbjct: 290 VREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKD 349

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F+QM+   + PN  T ++ L ACA +  K  G+ +H  +     K+D ++   L++
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMN 409

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY +CGS+D+   +F  + +K+L++W+ +I+ + Q+G        F  + +EG+  D  T
Sbjct: 410 MYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVT 469

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + + L + +           H   +K         V + +   G  G   D         
Sbjct: 470 MVSTLSACS-----------HGGMLKEG-------VQTFLSMVGDHGLAPDYRHFL---- 507

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                    M+   ++ G  E A  L   + D    PD+   +SLL+ C   +  ++  +
Sbjct: 508 --------CMVDLLSRAGRLEAAENL---IHDMPFLPDAVAWTSLLSGCKLHNDTKRAAR 556

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           V   + +     +      L N+YA+ G  DD  +
Sbjct: 557 VADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRK 591



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 151/276 (54%), Gaps = 5/276 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLFDAIPER 59
           +L ACT+ +DL  G  +H  V   G++SD  + N L+ MY KC + + ++R++F+ +  R
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTR 329

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            V++WN L   YV     ++A+  FK+M L  + PNE +LS++++ACA  G    G+ +H
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                    +D+   N+L++MY + G+L+D V VF  I    +VSW+ +IA    H H+ 
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELGRQLHCSLI-KMEIKSDPIVGVG 237
             L+ F ++    +  +  T  S L AC+ G  LKE G Q   S++    +  D    + 
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE-GVQTFLSMVGDHGLAPDYRHFLC 508

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +VD+ ++ G ++ A  + H MP   + +AW  ++SG
Sbjct: 509 MVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 8/215 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC        G  VH ++      +D  + NSL+ MY +CG+  D+  +F AI ++S
Sbjct: 372 VLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKS 431

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW++L + Y         +  F E++  G+  ++ ++ S ++AC+  G  +L   +  
Sbjct: 432 LVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGG--MLKEGVQT 489

Query: 121 YSIKL---GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLHE 176
           +   +   G   D      +VD+ ++ G LE A  +  D+   PD V+W ++++GC LH 
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549

Query: 177 HNDWALKLFQQM--KSSEINPNMFTYTSALKACAG 209
               A ++  ++    SE   +  T  S + A AG
Sbjct: 550 DTKRAARVADKLFELESEDEHSTVTLLSNVYAEAG 584


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 289/779 (37%), Positives = 448/779 (57%), Gaps = 17/779 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC    DL  G  +H  +V +G      +AN L+ +Y  CG    +  LF+ + ER 
Sbjct: 134 VLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERD 192

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN+  +       L  A+  F+ M L G+RP   +L   +  CA    +   + IH 
Sbjct: 193 LVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQA---QAIHF 249

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              + G +  +  + AL   YA++G+L  A  VF      D+VSWNA++     H H   
Sbjct: 250 IVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSE 309

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF +M    I+P+  T  +A   C+ +     GR +H   ++  +  D ++G  L+D
Sbjct: 310 AALLFARMLHEGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLD 366

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY +CGS +EAR +F  +P  N ++WN +I+G  Q G    A  LF  M  EG+   + T
Sbjct: 367 MYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRAT 425

Query: 301 LSTVLKSVAS----FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              +L++VAS     +A+   +++H+  V   + S+  I  +++  Y  CG +++A   F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485

Query: 357 KESSAVD---LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           +  +  D   +V+  ++I++ +Q G G+ AL  +  M    + P+   C ++L+ACA  +
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
           A  +G+ VH H+   G  S+ F   +L +MY +CGS++ A   F ++  +R +V ++AMI
Sbjct: 546 ALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
              +Q+G   EAL++F +M ++G  P+  + VSVL AC+H GL  E    F SM + +GI
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P ++HYAC +D+LGRAG   +A EL+  M  +    VW  LLGA R Y++V+ G+ A  
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
           M+  ++P   S +V+LSNI A AG WD  A+VR  M+   L+KE G SWIE+K +V+ F 
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFV 785

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GDRSH RS+EIY +L+ +   + + GYVP     L  V+E+EKE+LL  HSE+LA+A G
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALG 845

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++++    T+RV KNLR+C DCH + +FISKIV++EI+VRD +RFHHF +GSCSCG YW
Sbjct: 846 VMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 171/609 (28%), Positives = 303/609 (49%), Gaps = 21/609 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+A    + L  G ++H  +V  G +  E + N L+ +Y KC +  D   +F  +  R 
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SW ++ + Y      + A+  F  M   G+R +  +  +++ ACA  GD   GR IH 
Sbjct: 93  EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + ++ G       AN L+ +Y   G +  A+ +F+ +E  D+VSWNA IA          
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANAQSGDLGI 211

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ+M+   + P   T   AL  CA +   +    +H  + +  ++   +V   L  
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCATIRQAQ---AIHFIVRESGLEQTLVVSTALAS 268

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YA+ G + +A+ +F    E+++++WN ++  + Q+G   EAA LF  M  EG+   + T
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L       +S +     + +H  +++   + D  + N+L+D Y +CG  E+A  +FK   
Sbjct: 329 LVNASTGCSSLR---FGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP 385

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN----LSAYE 416
             + V+  +MI   +Q G  + A++L+  MQ   + P      +LL A A+      A  
Sbjct: 386 -CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMA 444

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE--IPDR-GIVSWSAMIG 473
           +G+++H  I+  G+ S+   G ++V MYA CG+ID+A  +F    + DR  +VSW+A+I 
Sbjct: 445 EGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIIS 504

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            L+QHG GK AL  F +M   GV PN IT V+VL AC  A  + E +   + + +  G++
Sbjct: 505 SLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL-RHSGME 563

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
                   +  + GR G  + A E+ + +  + +  ++ A++ A   Y    +   A ++
Sbjct: 564 SNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA---YSQNGLAGEALKL 620

Query: 594 LFAIEPEKS 602
            + ++ E S
Sbjct: 621 FWRMQQEGS 629



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 8/277 (2%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L  +L++    + +   +++HA  V    E +  + N L+  Y KC  + D  ++F    
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D  + T++ITAY + G  + A+ ++  MQ   +  D+    ++L ACA L    QG+ 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I++ G    +   N L+++Y  CG +  A   F ++ +R +VSW+A I   AQ G 
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGD 208

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
              AL++F +M  +GV P  ITLV  L  C  A +      HF  + ++ G++       
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVC--ATIRQAQAIHF--IVRESGLEQTLVVST 264

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +     R G   +A E+ D    + +   W A+LGA
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAA-ERDVVSWNAMLGA 300


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/806 (34%), Positives = 452/806 (56%), Gaps = 35/806 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C+  +DL  G ++HG VV  G   D FV+++ V  YAKC    +++ +FD +P R 
Sbjct: 147 ILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRD 206

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WNSL SCYV+C F ++ +  F+EMVL G++P+  ++S +++AC+   D   G+ IHG
Sbjct: 207 VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG 266

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K G   ++F +NALV++Y     + +A AVF  + H ++++WN++ +  V       
Sbjct: 267 FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK 326

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F++M  + + P+    +S L AC+ ++  + G+ +H   +K  +  D  V   LV+
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVN 386

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YA C  + EA+ +F LMP +N++ WN + S ++  G   +  ++F  M   GV  D  T
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           + ++L + +  Q +   K +H  +V+     D ++ N+L+  Y KC  V +A  +F    
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506

Query: 361 AVDLVACTSMITAY---AQFGLG--------------------------------EEALK 385
             ++ +   ++TAY    ++  G                                EEA++
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           ++ +MQ     PD     S+L AC+       GK++H ++ +     D    N+LV+MYA
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG +  +   F  +P + + SW+ MI     HG GKEAL +F +ML   V P+  T   
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTC 686

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+H+ LV E    F SM +   ++P  EHY C++DI  RAG  +EA   +  MP +
Sbjct: 687 VLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME 746

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A  W A L   R+YKNVE+ + +A+ LF I+P  S+ +V L NI  +A +W   +K+R
Sbjct: 747 PTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIR 806

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + MK+  + K PG SW  V ++V+TF  GD+S+  S +IY  LDE+   +  AGY P  +
Sbjct: 807 KLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTD 866

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             LHD+++ EK + L +HSEKLAVAFG++     +TIRV KNLRIC DCH + +++S +V
Sbjct: 867 YVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVV 926

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
              I+VRD  RFHHF+NG+CSC  +W
Sbjct: 927 GVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 276/534 (51%), Gaps = 1/534 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC + +D     Q H      G  SD  + N+ +  Y KC     +RR+FD +  R 
Sbjct: 46  VAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARD 105

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WNSL +CYV+C F ++ +  F++M L+ ++ N  ++SS++  C+   D   G++IHG
Sbjct: 106 VVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHG 165

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + ++ G   D+F ++A V+ YAK   + +A  VF  + H D+V+WN++ +  V       
Sbjct: 166 FVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQK 225

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F++M    + P+  T +  L AC+ ++  + G+ +H   +K  +  +  V   LV+
Sbjct: 226 GLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVN 285

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y  C  + EA+ +F LMP +N+I WN + S ++  G   +  ++F  M   GV  D   
Sbjct: 286 LYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMA 345

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +S++L + +  + +   K +H  +VK     D ++  +L++ Y  C  V +A  +F    
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++V   S+ + Y   G  ++ L ++ EM    + PD     S+L+AC++L   + GK 
Sbjct: 406 HRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKV 465

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   ++ G + D F  N+L+++YAKC  + +A   F  IP R + SW+ ++     +  
Sbjct: 466 IHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKE 525

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            ++ L MF QM  D V  + IT   V+  C     + EA   F  M+   G +P
Sbjct: 526 YEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ-TMGFKP 578



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 261/513 (50%), Gaps = 10/513 (1%)

Query: 79  EAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALV 138
           EA+  +      GI+P++    ++  ACA S D+L  ++ H  + + G  SD+   NA +
Sbjct: 23  EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82

Query: 139 DMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
             Y K   +E A  VF D+   D+V+WN++ A  V        L +F++M  +++  N  
Sbjct: 83  HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           T +S L  C+ ++  + G+++H  +++  +  D  V    V+ YAKC  + EA+ +F LM
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P ++++ WN + S ++  G   +  ++F  M  +GV  D  T+S +L + +  Q +   K
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            +H  ++K     + ++ N+L++ Y  C  V +A  +F      +++   S+ + Y   G
Sbjct: 263 AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCG 322

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             ++ L ++ EM    + PD    SS+L AC+ L   + GK +H   +K G + D F   
Sbjct: 323 FPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCT 382

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LVN+YA C  + +A   F  +P R +V+W+++       G  ++ L +F +M+ +GV P
Sbjct: 383 ALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKP 442

Query: 499 NHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQE 554
           + +T++S+L AC+    +   K  H F     + G+  +++ + C  ++ +  +    +E
Sbjct: 443 DLVTMLSILHACSDLQDLKSGKVIHGFAV---RHGM--VEDVFVCNALLSLYAKCVCVRE 497

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           A  + D +P +  AS W  +L A    K  E G
Sbjct: 498 AQVVFDLIPHREVAS-WNGILTAYFTNKEYEKG 529



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 144/301 (47%), Gaps = 2/301 (0%)

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           + +G   EA  ++      G+  D+     V K+ A+ +     KQ H  + +    SD 
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            I N+ I AYGKC  VE A ++F +  A D+V   S+   Y   G  ++ L ++ +M   
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           ++  +    SS+L  C++L   + GK++H  +++ G + D F  ++ VN YAKC  + +A
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F  +P R +V+W+++       G  ++ L +F +M+ DGV P+ +T+  +L AC+  
Sbjct: 196 QTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL 255

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
             +   K        K G+         ++++       +EA  + D MP + N   W +
Sbjct: 256 QDLKSGK-AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR-NVITWNS 313

Query: 574 L 574
           L
Sbjct: 314 L 314


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/808 (35%), Positives = 450/808 (55%), Gaps = 62/808 (7%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           + S + +   +V  Y  CG   D+  + + +     V WN L   ++    L+ A+    
Sbjct: 79  YVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSC 138

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+ +G +P+ F+L   + AC        G   HG     G++S++F  NALV MY++ G
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSG 198

Query: 146 NLEDAVAVFKDIEHP---DIVSWNAVIAGCVLHEHNDWALKLFQQM------KSSEINPN 196
           +LEDA  VF +I      D++SWN+++A  V   +   AL LF +M      K++    +
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSD 258

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           + +  + L ACA ++     +++H   I+    +D  V   L+D YAKCGSM +A  +F+
Sbjct: 259 IISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFN 318

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV------------ 304
           +M  K++++WN +++G+ Q+G    A  LF  M +E +  D  T S V            
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQE 378

Query: 305 -----------------------LKSVASFQAIGVCKQVHALSVKTAFESDDY------- 334
                                  L + AS  A+    + HA S+K    S D        
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438

Query: 335 -----IVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLY 387
                + N+LID Y KC   + A  IF        ++V  T MI  YAQ+G   +ALKL+
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498

Query: 388 LEMQDRE--INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT--FAGNSLVNM 443
            EM  +   + P+++  S +L ACA+LS+   GKQ+H ++ +      +  F  N L++M
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y+KCG +D A   F  +P R  VSW++M+ G   HGRGKEAL +F +M + G +P+ I+ 
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           + +L AC+H+G+V +   +F+ M   +G+    +HYAC+ID+L R+G+  +A + +  MP
Sbjct: 619 LVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMP 678

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            + +A++W ALL A R++ NVE+ ++A   L +++ E   ++ L+SNIYA+A  W +VA+
Sbjct: 679 MEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVAR 738

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R+ MK + +KK PG SW++ K    +F VGDRSH  S EIY+ L+ +   +   GYVP 
Sbjct: 739 IRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPE 798

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
               LHDV++ EK  LL  HSEKLA+A+GL+ T PG  IR+ KNLR+C DCH++F +ISK
Sbjct: 799 TNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISK 858

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IV  EIIVRD +RFHHF+NGSCSCGGYW
Sbjct: 859 IVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 166/542 (30%), Positives = 257/542 (47%), Gaps = 66/542 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS- 60
           LKAC        G   HG++   GF+S+ FV N+LV MY++ G+  D+  +FD I  +  
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215

Query: 61  --VVSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGDS 112
             V+SWNS+ + +V       A+  F EM        +  R +  S+ +++ ACA     
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN------ 166
              ++IH Y+I+ G  +D F  NAL+D YAK G+++DAV VF  +E  D+VSWN      
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335

Query: 167 -----------------------------AVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
                                        AVIAG     +   AL  FQQM      PN 
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNS 395

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKS------------DPIVGVGLVDMYAKC 245
            T  S L ACA +     G + H   +K  + S            D +V   L+DMY+KC
Sbjct: 396 VTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKC 455

Query: 246 GSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTL 301
            S   AR IF+ +P  E+N++ W ++I G+ Q G   +A  LF  M  +   V  +  T+
Sbjct: 456 RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTI 515

Query: 302 STVLKSVASFQAIGVCKQVHALSVK-TAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKES 359
           S +L + A   ++ + KQ+HA   +   +ES  Y V N LID Y KCG V+ A  +F   
Sbjct: 516 SCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM 575

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+ TSM++ Y   G G+EAL ++ +MQ     PD      LL AC++    +QG 
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL 635

Query: 420 QVHVHIIK--FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
             +  I++  +G ++       ++++ A+ G +D A +   E+P +     W A++    
Sbjct: 636 D-YFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACR 694

Query: 477 QH 478
            H
Sbjct: 695 VH 696



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 208/454 (45%), Gaps = 68/454 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S K L    ++H   +  G  +D FV N+L+  YAKCG+  D+  +F+ +  + 
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 61  VVSWNSLFSCYVHC-----------------------------------DFLEEAVCFFK 85
           VVSWN++ + Y                                       + +EA+  F+
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK------------LGYDSDMFS 133
           +M+L G  PN  ++ S+++ACA  G    G + H YS+K             G   D+  
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 134 ANALVDMYAKVGNLEDAVAVFKDI--EHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--K 189
            NAL+DMY+K  + + A  +F  I     ++V+W  +I G   +  ++ ALKLF +M  K
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--LVDMYAKCGS 247
              + PN +T +  L ACA +    +G+Q+H  + +       +  V   L+DMY+KCG 
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +D AR +F  MP++N ++W  ++SG+  +G   EA  +F  M + G   D  +   +L +
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNS------LIDAYGKCGHVEDAVKIFK---- 357
            +     G+  Q   L       SD  ++ S      +ID   + G ++ A K  +    
Sbjct: 625 CSHS---GMVDQ--GLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPM 679

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           E SA   VA  S    ++   L E AL   + M+
Sbjct: 680 EPSAAIWVALLSACRVHSNVELAEYALNKLVSMK 713



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 19/261 (7%)

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           ++ S   +   ++ +Y  CG   DA+ + +       V    ++ A+ + G  + A+ + 
Sbjct: 78  SYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVS 137

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             M      PD F     L AC  L +Y  G   H  I   GF S+ F  N+LV MY++ 
Sbjct: 138 CRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRS 197

Query: 448 GSIDDADRAFSEIPDRGI---VSWSAMIGGLAQHGRGKEALQMFGQMLE------DGVLP 498
           GS++DA   F EI  +GI   +SW++++    +    + AL +F +M             
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERS 257

Query: 499 NHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQE 554
           + I++V++L AC     + + K  H +      F      + + C  +ID   + G  ++
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFA-----DAFVCNALIDTYAKCGSMKD 312

Query: 555 AMELVDTMPFQANASVWGALL 575
           A+ + + M F+   S W A++
Sbjct: 313 AVNVFNVMEFKDVVS-WNAMV 332


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 298/794 (37%), Positives = 441/794 (55%), Gaps = 54/794 (6%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           +A +L+  Y    +   +  L + +P    SV  WN L    +H     +    +++M  
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  P+ ++   +  ACA      LG  +H    + G+ S++F  NA+V MY K G L  
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312

Query: 150 AVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI-NPNMFTYTSALK 205
           A  +F D+ H    D+VSWN+V++  +     + AL LF +M +  + +P++ +  + L 
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           ACA +     GRQ+H   I+  +  D  VG  +VDMYAKCG M+EA  +F  M  K++++
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS----------FQAIG 315
           WN +++G+ Q G    A SLF  M  E +  D  T + V+   A           F+ + 
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492

Query: 316 VC-------------------------KQVHALSVKTAFE-------SDDY-IVNSLIDA 342
            C                         K+ H  ++K           +DD  ++N LID 
Sbjct: 493 DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDM 552

Query: 343 YGKCGHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPD 398
           Y KC   E A K+F   S    D+V  T MI  YAQ G    AL+L+  M   D+ I P+
Sbjct: 553 YAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPN 612

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT-FAGNSLVNMYAKCGSIDDADRAF 457
            F  S  L ACA L+A   G+QVH ++++  + S   F  N L++MY+K G +D A   F
Sbjct: 613 DFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVF 672

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
             +P R  VSW++++ G   HGRG++AL++F +M +  ++P+ IT + VL AC+H+G+V 
Sbjct: 673 DNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVD 732

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              + F  M K FG+ P  EHYACM+D+ GRAG+  EAM+L++ MP +    VW ALL A
Sbjct: 733 HGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R++ NVE+G+ AA  L  +E     ++ LLSNIYA+A  W +VA++R  MK   +KK P
Sbjct: 793 CRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRP 852

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G SWI+ +  V TF VGDRSH +S++IY  L ++   +   GYVP     LHDV++ EK 
Sbjct: 853 GCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKG 912

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            LL+ HSEKLA+A+G++   P A IR+ KNLRIC DCH++  +ISKI+  EII+RD +RF
Sbjct: 913 DLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRF 972

Query: 758 HHFRNGSCSCGGYW 771
           HHF+NGSCSC GYW
Sbjct: 973 HHFKNGSCSCKGYW 986



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 262/538 (48%), Gaps = 66/538 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC +   L LG  +H  V  +GF S+ FV N++V MY KCG    +  +FD +  R 
Sbjct: 265 VFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRG 324

Query: 61  V---VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGR 116
           +   VSWNS+ S Y+       A+  F +M    +  P+  SL +++ ACA    SL GR
Sbjct: 325 IQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGR 384

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++HG+SI+ G   D+F  NA+VDMYAK G +E+A  VF+ ++  D+VSWNA++ G     
Sbjct: 385 QVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAG 444

Query: 177 HNDWALKLFQQMKSSEI-----------------------------------NPNMFTYT 201
             + AL LF++M    I                                    PN+ T  
Sbjct: 445 RLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLV 504

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSD-PIVGV-------GLVDMYAKCGSMDEARM 253
           S L AC  +     G++ HC  IK  +  D P  G        GL+DMYAKC S + AR 
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARK 564

Query: 254 IFHLMPEK--NLIAWNIVISGHLQNGGDMEAASLFPWMYR--EGVGFDQTTLSTVLKSVA 309
           +F  +  K  +++ W ++I G+ Q+G    A  LF  M++  + +  +  TLS  L + A
Sbjct: 565 MFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACA 624

Query: 310 SFQAIGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
              A+   +QVHA  ++  + S   ++ N LID Y K G V+ A  +F      + V+ T
Sbjct: 625 RLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWT 684

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           S++T Y   G GE+AL+++ EM+   + PD      +L AC++    + G      I  F
Sbjct: 685 SLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHG------INFF 738

Query: 429 GFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
             MS  F  +        +V+++ + G + +A +  +E+P +   V W A++     H
Sbjct: 739 NRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLH 796



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 14/239 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDE-FVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L AC     L  G QVH  V+   + S   FVAN L+ MY+K G+   ++ +FD +P+R+
Sbjct: 620 LVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRN 679

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW SL + Y      E+A+  F EM    + P+  +   ++ AC+ SG  ++   I+ 
Sbjct: 680 AVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSG--MVDHGINF 737

Query: 121 Y---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH- 175
           +   S   G D        +VD++ + G L +A+ +  ++   P  V W A+++ C LH 
Sbjct: 738 FNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHS 797

Query: 176 --EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             E  ++A     +++S   N   +T  S + A A    K++ R +  ++ +  IK  P
Sbjct: 798 NVELGEFAANRLLELESG--NDGSYTLLSNIYANA-RRWKDVAR-IRYTMKRTGIKKRP 852


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/768 (37%), Positives = 449/768 (58%), Gaps = 1/768 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            V  +C   +D  LG QV G ++  GF+    VANSL+ M++   +  ++  +FD + E  
Sbjct: 303  VTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECD 362

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++SWN++ S Y H     E++  F  M       N  +LSS+++ C+   +   GR IHG
Sbjct: 363  IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 422

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +KLG DS++   N L+ +Y++ G  EDA  VF+ +   D++SWN+++A  V       
Sbjct: 423  LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 482

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
             LK+  ++       N  T+ SAL AC+  E     + +H  +I        IVG  LV 
Sbjct: 483  GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 542

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY K G M EA+ +   MP+ + + WN +I GH +N    EA   +  +  +G+  +  T
Sbjct: 543  MYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYIT 602

Query: 301  LSTVLKSV-ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            + +VL +  A    +     +HA  V T FESDDY+ NSLI  Y KCG +  +  IF   
Sbjct: 603  MVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGL 662

Query: 360  SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                 +   +M+ A A  G GEEALK++ EM++  +N D F  S  L A ANL+  E+G+
Sbjct: 663  GNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQ 722

Query: 420  QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            Q+H  +IK GF SD    N+ ++MY KCG + D  +   +  +R  +SW+ +I   A+HG
Sbjct: 723  QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHG 782

Query: 480  RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              ++A + F +ML+ G  P+H+T VS+L ACNH GLV E   +++SM ++FG+ P  EH 
Sbjct: 783  CFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHC 842

Query: 540  ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             C+ID+LGR+G+   A   +  MP   N   W +LL A RI+ N+E+ +  AE L  ++P
Sbjct: 843  VCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDP 902

Query: 600  EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
               S +VL SN+ A++G W++V  +R+ M  N +KK+P  SW+++KDKV++F +G++ H 
Sbjct: 903  SDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHP 962

Query: 660  RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            ++  I AKL E+  +  +AGYVP     LHD++E +KE  L++HSE+LA+AFGLI TP  
Sbjct: 963  QASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPES 1022

Query: 720  ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
            +T+R+ KNLR+C DCH+ ++F+S IV R+I++RD  RFHHF  G CSC
Sbjct: 1023 STLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 297/565 (52%), Gaps = 3/565 (0%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G QVHG VV TG   D +V  +LV  Y   G   ++++LF+ +P+ +VVSW SL   Y  
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 274

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                E +  ++ M   G+  N+ + +++ ++C    D +LG ++ G+ I+ G++  +  
Sbjct: 275 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 334

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           AN+L+ M++   ++E+A  VF  +   DI+SWNA+I+    H     +L+ F  M+    
Sbjct: 335 ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 394

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             N  T +S L  C+ ++  + GR +H  ++K+ + S+  +   L+ +Y++ G  ++A +
Sbjct: 395 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 454

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M E++LI+WN +++ ++Q+G  ++   +   + + G   +  T ++ L + ++ + 
Sbjct: 455 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 514

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   K VHAL +   F     + N+L+  YGK G + +A K+ +     D V   ++I  
Sbjct: 515 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 574

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-ANLSAYEQGKQVHVHIIKFGFMS 432
           +A+     EA+K Y  ++++ I  +     S+L AC A     + G  +H HI+  GF S
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 634

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D +  NSL+ MYAKCG ++ ++  F  + ++  ++W+AM+   A HG G+EAL++FG+M 
Sbjct: 635 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 694

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             GV  +  +    L A  +  ++ E +     +  K G +         +D+ G+ G+ 
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQ-QLHGLVIKLGFESDLHVTNAAMDMYGKCGEM 753

Query: 553 QEAMELVDTMPFQANASVWGALLGA 577
            + ++++   P   +   W  L+ A
Sbjct: 754 HDVLKML-PQPINRSRLSWNILISA 777



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 267/511 (52%), Gaps = 1/511 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK  +       G  +H   +    +   F  N+L+ MY+K GN   +R +FD +  R+ 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD-SLLGRKIHG 120
            SW+++ S YV     EEAV  F +M   G+ PN F ++S+I AC+ SG  +  G ++HG
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G   D++   ALV  Y  +G + +A  +F+++   ++VSW +++ G     +   
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L ++Q+M+   ++ N  T+ +   +C  +E + LG Q+   +I+   +    V   L+ 
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 340

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M++   S++EA  +F  M E ++I+WN +IS +  +G   E+   F WM       + TT
Sbjct: 341 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L   +S   +   + +H L VK   +S+  I N+L+  Y + G  EDA  +F+  +
Sbjct: 401 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 460

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL++  SM+  Y Q G   + LK+  E+       +    +S L AC+N     + K 
Sbjct: 461 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI 520

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH  II  GF      GN+LV MY K G + +A +    +P    V+W+A+IGG A++  
Sbjct: 521 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE 580

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
             EA++ +  + E G+  N+IT+VSVL AC+
Sbjct: 581 PNEAVKAYKLIREKGIPANYITMVSVLGACS 611



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 142/277 (51%), Gaps = 9/277 (3%)

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           LK  +   +    K +HA  +  +     +  N+LI+ Y K G++E A  +F E    + 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY--EQGKQVH 422
            + ++M++ Y + GL EEA+ L+ +M    + P+ F+ +SL+ AC+  S Y  ++G QVH
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSR-SGYMADEGFQVH 219

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
             ++K G + D + G +LV+ Y   G + +A + F E+PD  +VSW++++ G +  G   
Sbjct: 220 GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPG 279

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK--KFGIQPMQEHYA 540
           E L ++ +M ++GV  N  T  +V  +C   GL+ +    ++ +    ++G +       
Sbjct: 280 EVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVAN 336

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +I +       +EA  + D M  + +   W A++ A
Sbjct: 337 SLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISA 372


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/792 (35%), Positives = 466/792 (58%), Gaps = 24/792 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           ++ AC+   +L  G ++H  +    F+ +  + N+L+ MY+KCG+ ID+++ FD +P   
Sbjct: 147 LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS 206

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLG- 115
           +R VV+WN++ S ++      EA+  F++M   G  P N  +  S++++C  +G  LL  
Sbjct: 207 KRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAG--LLSL 264

Query: 116 ---RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF--KDIEHPD--IVSWNAV 168
              R IHG  +  G + + F   ALVD Y K+G+L+DA  VF  K  E P   +V+ +A+
Sbjct: 265 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAM 324

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL-KELGRQLHCSLIKME 227
           I+ C  +     +L+LF  M      P+  T  S L AC+ +++       L  ++  + 
Sbjct: 325 ISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVS 384

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
              D ++G  L+  YA+   +  AR  F  +   ++++WN + + +LQ+    EA  LF 
Sbjct: 385 ATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFE 444

Query: 288 WMYREGVGFDQTTLSTVLKSVASF---QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            M  EGV     T  T L + A++    A  + K++ +L  +   E D  + N+ ++ Y 
Sbjct: 445 RMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYA 504

Query: 345 KCGHVEDAVKIFKESSAV--DLVACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFV 401
           KCG + DA  +F+  S    D +   SM+ AY   GLG+EA +L+  M+ ++ + P+   
Sbjct: 505 KCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVT 564

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF--SE 459
             ++L+A  + ++  QG+++H  ++  GF SDT   N+L+NMYAKCGS+DDA   F  S 
Sbjct: 565 FVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSS 624

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
                +++W+++I G AQ+G+ + AL++F  M + GV PNH+T +S L ACNH G + + 
Sbjct: 625 SNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQG 684

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
                 M    GI P  +H++C++D+LGR G+  EA +L++    QA+   W ALL A +
Sbjct: 685 CELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACK 743

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
             K +E G+  AE +  ++PE +S++++L+++YA+AG W+  A +R+ M D  ++ +PG 
Sbjct: 744 NSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGC 803

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           S +EV  ++++F+ GD+SH +S+EIY +L+ +   +  AGYV      LHDV +  KE+L
Sbjct: 804 SAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERL 863

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
           L  HSEKLA+AFGL++TP G+ +RV KNLR+C DCHT+ + ISK+  R+I++RD +R+HH
Sbjct: 864 LMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHH 923

Query: 760 FRNGSCSCGGYW 771
           F +G+CSCG YW
Sbjct: 924 FTSGTCSCGDYW 935



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 175/607 (28%), Positives = 289/607 (47%), Gaps = 30/607 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD--SDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +L+AC   + L  G ++H  ++    D  +  F+A+ L+VM+AKCGN  ++  L D    
Sbjct: 49  LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA- 107

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            SV S  ++   ++     ++A+  F  M    +RPN  +L +++NAC+  G+   GR+I
Sbjct: 108 -SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRI 163

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP---DIVSWNAVIAGCVLH 175
           H       ++ +    NAL+ MY+K G+L DA   F  +      D+V+WNA+I+  + +
Sbjct: 164 HSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRN 223

Query: 176 EHNDWALKLFQQM-KSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDP 232
                AL+LF+ M +     PN  T+ S L +C  AG+   E  R +H  ++   I+ + 
Sbjct: 224 GSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREA 283

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLM----PEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            V   LVD Y K GS+D+A  +F       P  +L+  + +IS   QNG   E+  LF  
Sbjct: 284 FVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFA 343

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQV--HALSVKTAFESDDYIVNSLIDAYGKC 346
           M  EG      TL +VL + +  Q       V   A+ V +A   D+ +  +L+  Y + 
Sbjct: 344 MNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATR-DNVLGTTLLTTYARS 402

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
             +  A   F    + D+V+  +M  AY Q     EAL L+  M    + P      + L
Sbjct: 403 NDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITAL 462

Query: 407 NACANL---SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD- 462
            ACA     +A   GK++   + + G   DT   N+ +NMYAKCGS+ DA   F  I   
Sbjct: 463 TACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPA 522

Query: 463 -RGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            R  ++W++M+     HG GKEA ++F  M  E  V PN +T V+VL A      +A+ +
Sbjct: 523 RRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGR 582

Query: 521 H-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD-TMPFQANASVWGALLGAA 578
             H   +   F    + ++   ++++  + G   +A  + D +   Q +   W +L+   
Sbjct: 583 EIHARVVSNGFESDTVIQN--ALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGY 640

Query: 579 RIYKNVE 585
             Y   E
Sbjct: 641 AQYGQAE 647



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 146/267 (54%), Gaps = 12/267 (4%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHA--LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +T   +L++    +A+   +++HA  LS +    +  ++ + LI  + KCG++ +A  + 
Sbjct: 44  STYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALA 103

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              ++V   +CT+MI A+ + G  ++A++L+  M   E+ P+     +L+NAC+ L    
Sbjct: 104 DRFASV--YSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLA 158

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP---DRGIVSWSAMIG 473
            G+++H  I    F  ++  GN+L++MY+KCGS+ DA +AF  +P    R +V+W+AMI 
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218

Query: 474 GLAQHGRGKEALQMFGQMLEDGV-LPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFG 531
              ++G  +EALQ+F  M  DG   PN +T VSVL +C  AGL++ E            G
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMEL 558
           I+        ++D  G+ G   +A E+
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEV 305



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 169/325 (52%), Gaps = 17/325 (5%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLI--KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           TY   L+AC  +   + G++LH  ++  ++++ +   +   L+ M+AKCG++ EA  +  
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
                ++ +   +I   +++G   +A  LF  M    V  +   L  ++ + +    +  
Sbjct: 105 RF--ASVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---KESSAVDLVACTSMITA 373
            +++H+      FE +  + N+LI  Y KCG + DA + F     +S  D+V   +MI+A
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219

Query: 374 YAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNAC--ANLSAYEQGKQVHVHIIKFGF 430
           + + G   EAL+L+ +M +D    P+S    S+L++C  A L + E  + +H  I+  G 
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 279

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAF----SEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
             + F   +LV+ Y K GS+DDA   F     E P   +V+ SAMI    Q+G  +E+L+
Sbjct: 280 EREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLR 339

Query: 487 MFGQMLEDGVLPNHITLVSVLCACN 511
           +F  M  +G  P+ +TLVSVL AC+
Sbjct: 340 LFFAMNLEGTKPSGVTLVSVLNACS 364


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/759 (37%), Positives = 440/759 (57%), Gaps = 3/759 (0%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           LQ+   ++  G   D      L   +   G     R+LF+ + +  +  +N L   +   
Sbjct: 31  LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90

Query: 75  DFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              + ++  +  +   + +RP+ F+ +  I+A +   D  +G  +H +SI  G  S++F 
Sbjct: 91  GLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFV 150

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +A+VD+Y K    E A  VF  +   D V WN +I+G   + + + ++++F  M    +
Sbjct: 151 GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL 210

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           + +  T  + L A A ++   LG  + C   K  + SD  V  GL+ +Y+KCG   + R+
Sbjct: 211 SFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRI 270

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  + + +LI++N +ISG+  N     A +LF  +   G   + +TL  ++     F  
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + + +  LS+K        +  +L   Y +   V+ A ++F ES    L +  +MI+ 
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q GL + A+ L+ EM   +++P+    +S+L+ACA L A   GK VH  I      S+
Sbjct: 391 YTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +   +LV+MYAKCGSI +A + F  + D+ +V+W+AMI G   HG GKEAL++F +ML+
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G+ P  +T +S+L AC+H+GLV+E    F SM   +G QPM EHYACM+DILGRAG+  
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A+E ++ MP +   +VWGALLGA  I+KN E+   A++ LF ++PE    +VLLSNIY+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           +   +   A VR+ +K  KL K PG + IE+ D+ Y FT GDRSH ++  I+  L++++ 
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG 689

Query: 674 LLNKAGY-VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
            + +AGY    V T LHDVE+ EKE ++  HSEKLA+AFGLI+T PG  IR+ KNLR+C+
Sbjct: 690 KMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL 749

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCHT+ +FISKI  R I+VRD NRFHHF+NG CSCG YW
Sbjct: 750 DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 245/481 (50%), Gaps = 7/481 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + A +  +D  +G+ +H   +  G  S+ FV +++V +Y K      +R++FD +PER  
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V WN++ S +    + E+++  F +M+  G+  +  +L++++ A A   +  LG  I   
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           + K G  SD++    L+ +Y+K G       +F  I+ PD++S+NA+I+G   +   + A
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + LF+++ +S    N  T    +         +L R +    +K+ I   P V   L  +
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y +   +  AR +F   PEK+L +WN +ISG+ QNG    A SLF  M  + +  +  T+
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTV 418

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L + A   A+ + K VH L      ES+ Y+  +L+D Y KCG + +A ++F     
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++V   +MIT Y   G G+EALKL+ EM    I P      S+L AC++     +G ++
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538

Query: 422 -HVHIIKFGF--MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
            H     +GF  MS+ +A   +V++  + G + +A      +P + G   W A++G    
Sbjct: 539 FHSMANNYGFQPMSEHYA--CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI 596

Query: 478 H 478
           H
Sbjct: 597 H 597



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 187/360 (51%), Gaps = 4/360 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A    ++  LG+ +  +    G  SD +V   L+ +Y+KCG     R LFD I +  
Sbjct: 220 VLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPD 279

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++S+N++ S Y      E AV  F+E++ SG R N  +L  +I          L R I  
Sbjct: 280 LISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQN 339

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K+G       + AL  +Y ++  ++ A  +F +     + SWNA+I+G   +   D 
Sbjct: 340 LSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDR 399

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           A+ LFQ+M   +++PN  T TS L ACA +    +G+ +H  LIK E ++S+  V   LV
Sbjct: 400 AISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVH-GLIKSERLESNVYVSTALV 457

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCGS+ EAR +F LM +KN++ WN +I+G+  +G   EA  LF  M + G+     
Sbjct: 458 DMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGV 517

Query: 300 TLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           T  ++L + +    +    ++ H+++    F+        ++D  G+ G + +A++  + 
Sbjct: 518 TFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 577


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 276/768 (35%), Positives = 453/768 (58%), Gaps = 3/768 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  K+    G +VH  V  T       + N+L+ M+ + G+ +++  +F  + ER 
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN L   Y    + +EA+  +  M+  GIRP+ ++   ++  C G  D   GR++H 
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ G++SD+   NAL+ MY K G++  A  VF  +   D +SWNA+I+G   ++    
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF  M+   ++P++ T TS + AC  +  + LGR++H  +IK    ++  V   L+ 
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M++  G  DEA M+F  M  K+L++W  +ISG+ +NG   +A   +  M  EGV  D+ T
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + A    +     +H  + +T   S   + NSLID Y KC  ++ A+++F    
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++++ TS+I          EAL  + +M    + P+S    S+L+ACA + A   GK+
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H H ++ G   D F  N+L++MY +CG ++ A   F+   ++ + SW+ ++ G AQ G+
Sbjct: 519 IHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGK 577

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G  A+++F +M+E  V P+ IT  S+LCAC+ +G+V +   +FESME KF I P  +HYA
Sbjct: 578 GGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYA 637

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            ++D+LGRAG+ ++A E +  MP   + ++WGALL A RIY+NVE+G+ AA+ +F ++ +
Sbjct: 638 SVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTK 697

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               ++LL N+YA +G WD VA+VR+ M++N+L  +PG SW+EV  +V+ F  GD  H +
Sbjct: 698 SVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQ 757

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            KEI A L+   + +   G + M +    D  ++ K ++   HSE+LA+AFGLI T PG 
Sbjct: 758 IKEINAVLEGFYEKMEATG-LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGT 816

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
            I V KNL +C +CH + +FISK+V R I VRD  +FHHF++G CSCG
Sbjct: 817 PIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCG 864



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 259/500 (51%), Gaps = 6/500 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           LE+A+     M    +   E +  +++  C     +  G ++H Y  K      +   NA
Sbjct: 75  LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNA 134

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ M+ + G+L +A  VF  +   D+ SWN ++ G     + D AL L+ +M    I P+
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           ++T+   L+ C G+     GR++H  +I+   +SD  V   L+ MY KCG +  AR++F 
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP ++ I+WN +ISG+ +N   +E   LF  M    V  D  T+++V+ +  +     +
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            ++VH   +KT F ++  + NSLI  +   G  ++A  +F +    DLV+ T+MI+ Y +
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GL E+A++ Y  M+   + PD    +S+L+ACA L   ++G  +H    + G  S    
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            NSL++MY+KC  ID A   F  IP++ ++SW+++I GL  + R  EAL  F QM+   +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SL 493

Query: 497 LPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            PN +TLVSVL AC   G ++  K  H  ++    G      +   ++D+  R G+ + A
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVRCGRMEPA 551

Query: 556 MELVDTMPFQANASVWGALL 575
               ++   + + + W  LL
Sbjct: 552 WNQFNSC--EKDVASWNILL 569



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 230/445 (51%), Gaps = 3/445 (0%)

Query: 166 NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           N++I    L    + AL     M+  +++    TY + L+ C        G ++H  + K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
              +    +G  L+ M+ + G + EA  +F  M E++L +WN+++ G+ + G   EA +L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           +  M   G+  D  T   VL++      +   ++VH   ++  FESD  +VN+LI  Y K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG +  A  +F      D ++  +MI+ Y +  +  E L+L+  M++  ++PD    +S+
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           ++AC  L     G++VH ++IK GF+++    NSL+ M++  G  D+A+  FS++  + +
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW+AMI G  ++G  ++A++ +  M  +GV+P+ IT+ SVL AC   GL+ +     E 
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEF 422

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI-YKNV 584
            ++  G+         +ID+  +     +A+E+   +P   N   W +++   R+ Y++ 
Sbjct: 423 ADRT-GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSF 480

Query: 585 EVGQHAAEMLFAIEPEKSSTHVLLS 609
           E      +M+ +++P   +   +LS
Sbjct: 481 EALFFFQQMILSLKPNSVTLVSVLS 505


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/792 (35%), Positives = 465/792 (58%), Gaps = 24/792 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           ++ AC+   +L  G ++H  +    F+ +  + N+L+ MY+KCG+ ID+++ FD +P   
Sbjct: 13  LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS 72

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLG- 115
           +R VV+WN++ S ++      EA+  F++M   G  P N  +  S++++C  +G  LL  
Sbjct: 73  KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAG--LLSL 130

Query: 116 ---RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF--KDIEHPD--IVSWNAV 168
              R IHG  +  G + + F   ALVD Y K+G+L+DA  VF  K  E P   +V+ +A+
Sbjct: 131 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL-KELGRQLHCSLIKME 227
           I+ C  +     +L+LF  M      P+  T  S L AC+ + +       L  ++  + 
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVS 250

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
              D ++G  L+  YA+   +  AR  F  +   ++++WN + + +LQ+    EA  LF 
Sbjct: 251 ATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFE 310

Query: 288 WMYREGVGFDQTTLSTVLKSVASF---QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            M  EGV     T  T L + A++    A  + K++ +L  +   E D  + N+ ++ Y 
Sbjct: 311 RMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYA 370

Query: 345 KCGHVEDAVKIFKESSAV--DLVACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFV 401
           KCG + DA  +F+  S    D +   SM+ AY   GLG+EA +L+  M+ ++ + P+   
Sbjct: 371 KCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVT 430

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF--SE 459
             ++L+A  + ++  QG+++H  ++  GF SDT   N+L+NMYAKCGS+DDA   F  S 
Sbjct: 431 FVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSS 490

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
                +++W++++ G AQ+G+ + AL++F  M + GV PNHIT +S L ACNH G + + 
Sbjct: 491 SNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQG 550

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
                 M    GI P  +H++C++D+LGR G+  EA +L++    QA+   W ALL A +
Sbjct: 551 CELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACK 609

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
             K +E G+  AE +  ++PE +S++++L+++YA+AG W+  A +R+ M D  ++ +PG 
Sbjct: 610 NSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGC 669

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           S +EV  ++++F+ GD+SH +S+EIY +L+ +   +  AGYV      LHDV +  KE+L
Sbjct: 670 SAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERL 729

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
           L  HSEKLA+AFGL++TP G+ +RV KNLR+C DCHT+ + ISK+  R+I++RD +R+HH
Sbjct: 730 LMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHH 789

Query: 760 FRNGSCSCGGYW 771
           F +G+CSCG YW
Sbjct: 790 FTSGTCSCGDYW 801



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 241/514 (46%), Gaps = 23/514 (4%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RPN  +L +++NAC+  G+   GR+IH       ++ +    NAL+ MY+K G+L DA 
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 152 AVFKDIEHP---DIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKAC 207
             F  +      D+V+WNA+I+  + +     AL+LF+ M       PN  T+ S L +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 208 --AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM----PEK 261
             AG+   E  R +H  ++   I+ +  V   LVD Y K GS+D+A  +F       P  
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV- 320
           +L+  + +IS   QNG   E+  LF  M  EG      TL +VL + +          V 
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVL 242

Query: 321 -HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
             A+ V +A   D+ +  +L+  Y +   +  A   F    + D+V+  +M  AY Q   
Sbjct: 243 EQAMEVVSATR-DNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANL---SAYEQGKQVHVHIIKFGFMSDTFA 436
             EAL L+  M    + P      + L ACA     +A   GK++   + + G   DT  
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEALQMFGQM-LE 493
            N+ +NMYAKCGS+ DA   F  I    R  ++W++M+     HG GKEA ++F  M  E
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             V PN +T V+VL A      +A+ +  H   +   F    + ++   ++++  + G  
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN--ALLNMYAKCGSL 479

Query: 553 QEAMELVD-TMPFQANASVWGALLGAARIYKNVE 585
            +A  + D +   Q +   W +L+     Y   E
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAE 513



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 210/430 (48%), Gaps = 29/430 (6%)

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           E+ PN     + + AC+ +     GR++H  +   + + + ++G  L+ MY+KCGS+ +A
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 252 RMIFHLMP---EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV-GFDQTTLSTVLKS 307
           +  F  +P   +++++ WN +IS  L+NG   EA  LF  M  +G    +  T  +VL S
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 308 V--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF----KESSA 361
              A   ++   + +H   V    E + ++  +L+D+YGK G ++DA ++F     E  +
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS-------A 414
             LV C++MI+A  Q G  +E+L+L+  M      P      S+LNAC+ L         
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            EQ  +V           D   G +L+  YA+   +  A   F  I    +VSW+AM   
Sbjct: 242 LEQAMEV------VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAA 295

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEA-KHHFESMEKKFGI 532
             QH R +EAL +F +ML +GV P+  T ++ L AC  +    A A     +S+ ++ G+
Sbjct: 296 YLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGL 355

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTM-PFQANASVWGALLGAARIYKNVEVGQHAA 591
           +         +++  + G   +A  + + + P + +   W ++L A   Y +  +G+ A 
Sbjct: 356 EGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA---YGHHGLGKEAF 412

Query: 592 EMLFAIEPEK 601
           E+  A+E EK
Sbjct: 413 ELFQAMEAEK 422


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 306/802 (38%), Positives = 461/802 (57%), Gaps = 54/802 (6%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H   +  GF  + F++N+L+ +Y + G+   +++LFD +  R++V+W  L S Y    
Sbjct: 120 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 179

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS--LLGRKIHGYSIKLGYDSDMFS 133
             +EA   F++MV +G  PN ++  S + AC  SG S   LG +IHG   K  Y SD+  
Sbjct: 180 KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVV 239

Query: 134 ANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW--ALKLFQQMKS 190
            N L+ MY   + +  DA +VF  I   + +SWN++I+  V     D   A  LF  M+ 
Sbjct: 240 CNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS--VYSRRGDAVSAYDLFSSMQK 297

Query: 191 S----EINPN-MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGVGLVDMYAK 244
                   PN  F+  S L+     E +  GR++H  +I+  +  + + +G GLV+MYAK
Sbjct: 298 EGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 352

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP---------W------- 288
            G++ +A  +F LM EK+ ++WN +ISG  QN    +AA +F          W       
Sbjct: 353 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGAL 412

Query: 289 ----------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
                           M R G G  + T   +L +V+S     V  Q+HAL +K     D
Sbjct: 413 SDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD 472

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             I N+L+  YGKCG + +  KIF + S   D V+  SMI+ Y    L  +A+ L   M 
Sbjct: 473 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 532

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
            +    DSF  +++L+ACA+++  E+G +VH   I+    SD   G++LV+MY+KCG ID
Sbjct: 533 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 592

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A R F  +P R + SW++MI G A+HG G++AL++F +M+ DG  P+H+T V VL AC+
Sbjct: 593 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 652

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           H G V E   HF+SM + + + P  EH++CM+D+LGRAGK  E  + +++MP + N  +W
Sbjct: 653 HVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIW 712

Query: 572 GALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
             +LGA      +N E+G+ AAEML  +EP+ +  +VLL+N+YAS   W++VAK R  MK
Sbjct: 713 RTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMK 772

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           +  +KKE G SW+ +KD V+ F  GD+ H     IY KL E++  +  AGY+P  +  L 
Sbjct: 773 EAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALF 832

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D+E   KE+LL +HSEK+AVAF ++       IR+ KNLR+C DCH++F +ISKIV R+I
Sbjct: 833 DLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQI 891

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           ++RD NRFHHF +G CSCG YW
Sbjct: 892 VLRDSNRFHHFEDGKCSCGDYW 913



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 265/542 (48%), Gaps = 62/542 (11%)

Query: 2   LKAC--TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-GNFIDSRRLFDAIPE 58
           L+AC  +      LG+Q+HG++  T + SD  V N L+ MY  C  +  D+R +FD I  
Sbjct: 207 LRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGI 266

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI----RPNE-FSLSSMINACAGSGDSL 113
           R+ +SWNS+ S Y        A   F  M   G+    +PN+ FS  S++          
Sbjct: 267 RNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE-----GRR 321

Query: 114 LGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            GR++H + I+ G  D+ +   N LV+MYAK G + DA +VF+ +   D VSWN++I+G 
Sbjct: 322 KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 381

Query: 173 VLHEHND----------------W----------------ALKLFQQMKSSEINPNMFTY 200
             +E ++                W                A+K F QM       +  T+
Sbjct: 382 DQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTF 441

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + L A + + L E+  Q+H  ++K  +  D  +G  L+  Y KCG M+E   IF  M E
Sbjct: 442 INILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 501

Query: 261 -KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            ++ ++WN +ISG++ N    +A  L  +M ++G   D  T +T+L + AS   +    +
Sbjct: 502 TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME 561

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VHA  ++   ESD  + ++L+D Y KCG ++ A + F+     ++ +  SMI+ YA+ G 
Sbjct: 562 VHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGH 621

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           GE+ALKL+  M      PD      +L+AC+++   E+G +       F  MS+ +  + 
Sbjct: 622 GEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE------HFKSMSEVYRLSP 675

Query: 440 -------LVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ-HGRGKEALQMFGQ 490
                  +V++  + G +D+     + +P +  ++ W  ++G   + +GR  E  +   +
Sbjct: 676 RVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAE 735

Query: 491 ML 492
           ML
Sbjct: 736 ML 737



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 251/532 (47%), Gaps = 64/532 (12%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +  S+IN   GS  S   R++H  SIK G+  ++F +N L+++Y ++G+L  A  +F ++
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKEL 215
            + ++V+W  +I+G   +   D A   F+ M  +   PN + + SAL+AC  +G    +L
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           G Q+H  + K    SD +V   L+ MY  C  S ++AR +F  +  +N I+WN +IS + 
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC-------KQVHALSVKT 327
           + G  + A  LF  M +EG+GF         K   +F    V        ++VHA  ++T
Sbjct: 281 RRGDAVSAYDLFSSMQKEGLGFS-------FKPNDAFSEFSVLEEGRRKGREVHAHVIRT 333

Query: 328 AFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ---------- 376
               +   + N L++ Y K G + DA  +F+     D V+  S+I+   Q          
Sbjct: 334 GLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEM 393

Query: 377 FGLGEE----------------------ALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           F L  E                      A+K +L+M             ++L+A ++LS 
Sbjct: 394 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 453

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIG 473
           +E   Q+H  ++K+    DT  GN+L++ Y KCG +++ ++ F+ + + R  VSW++MI 
Sbjct: 454 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 513

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME-KKFGI 532
           G   +    +A+ +   M++ G   +  T  ++L AC     +         ME    GI
Sbjct: 514 GYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG------MEVHACGI 567

Query: 533 QPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
           +   E      + ++D+  + G+   A    + MP + N   W +++ G AR
Sbjct: 568 RACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYAR 618



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)

Query: 302 STVLKSVASFQAI-----GVC-----KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           +T+  S  +F+++     G C     +++H  S+K  F  + ++ N+LI+ Y + G +  
Sbjct: 93  TTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGS 152

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-- 409
           A K+F E S  +LV    +I+ Y Q G  +EA   + +M      P+ +   S L AC  
Sbjct: 153 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 212

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-GSIDDADRAFSEIPDRGIVSW 468
           +  S  + G Q+H  I K  + SD    N L++MY  C  S +DA   F  I  R  +SW
Sbjct: 213 SGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISW 272

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           +++I   ++ G    A  +F  M ++G+
Sbjct: 273 NSIISVYSRRGDAVSAYDLFSSMQKEGL 300


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/759 (37%), Positives = 440/759 (57%), Gaps = 3/759 (0%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           LQ+   ++  G   D      L   +   G     R+LF+ + +  +  +N L   +   
Sbjct: 31  LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90

Query: 75  DFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              + ++  +  +   + +RP+ F+ +  I+A +   D  +G  +H +SI  G  S++F 
Sbjct: 91  GLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFV 150

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +A+VD+Y K    E A  VF  +   D V WN +I+G   + + + ++++F  M    +
Sbjct: 151 GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL 210

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           + +  T  + L A A ++   LG  + C   K  + SD  V  GL+ +Y+KCG   + R+
Sbjct: 211 SFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRI 270

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  + + +LI++N +ISG+  N     A +LF  +   G   + +TL  ++     F  
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + + +  LS+K        +  +L   Y +   V+ A ++F ES    L +  +MI+ 
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q GL + A+ L+ EM   +++P+    +S+L+ACA L A   GK VH  I      S+
Sbjct: 391 YTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +   +LV+MYAKCGSI +A + F  + D+ +V+W+AMI G   HG GKEAL++F +ML+
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G+ P  +T +S+L AC+H+GLV+E    F SM   +G QPM EHYACM+DILGRAG+  
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A+E ++ MP +   +VWGALLGA  I+KN E+   A++ LF ++PE    +VLLSNIY+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           +   +   A VR+ +K  KL K PG + IE+ D+ Y FT GDRSH ++  I+  L++++ 
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG 689

Query: 674 LLNKAGY-VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
            + +AGY    V T LHDVE+ EKE ++  HSEKLA+AFGLI+T PG  IR+ KNLR+C+
Sbjct: 690 KMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL 749

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCHT+ +FISKI  R I+VRD NRFHHF+NG CSCG YW
Sbjct: 750 DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 245/481 (50%), Gaps = 7/481 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + A +  +D  +G+ +H   +  G  S+ FV +++V +Y K      +R++FD +PER  
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V WN++ S +    + E+++  F +M+  G+  +  +L++++ A A   +  LG  I   
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           + K G  SD++    L+ +Y+K G       +F  I+ PD++S+NA+I+G   +   + A
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + LF+++ +S    N  T    +         +L R +    +K+ I   P V   L  +
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y +   +  AR +F   PEK+L +WN +ISG+ QNG    A SLF  M  + +  +  T+
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTV 418

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L + A   A+ + K VH L      ES+ Y+  +L+D Y KCG + +A ++F     
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++V   +MIT Y   G G+EALKL+ EM    I P      S+L AC++     +G ++
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538

Query: 422 -HVHIIKFGF--MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
            H     +GF  MS+ +A   +V++  + G + +A      +P + G   W A++G    
Sbjct: 539 FHSMANNYGFQPMSEHYA--CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI 596

Query: 478 H 478
           H
Sbjct: 597 H 597



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 187/360 (51%), Gaps = 4/360 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A    ++  LG+ +  +    G  SD +V   L+ +Y+KCG     R LFD I +  
Sbjct: 220 VLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPD 279

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++S+N++ S Y      E AV  F+E++ SG R N  +L  +I          L R I  
Sbjct: 280 LISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQN 339

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K+G       + AL  +Y ++  ++ A  +F +     + SWNA+I+G   +   D 
Sbjct: 340 LSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDR 399

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           A+ LFQ+M   +++PN  T TS L ACA +    +G+ +H  LIK E ++S+  V   LV
Sbjct: 400 AISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVH-GLIKSERLESNVYVSTALV 457

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCGS+ EAR +F LM +KN++ WN +I+G+  +G   EA  LF  M + G+     
Sbjct: 458 DMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGV 517

Query: 300 TLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           T  ++L + +    +    ++ H+++    F+        ++D  G+ G + +A++  + 
Sbjct: 518 TFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 577


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 268/742 (36%), Positives = 443/742 (59%), Gaps = 5/742 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+L+ M+ + GN +D+  +F  + ER V SWN L   Y      +EA+  +  M+ + 
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           IRPN ++  S++  CAG  D   G++IH + I+ G++SD+   NAL+ MY K G++ +A 
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F  +   D +SWNA+I+G   +      L+LF  M+   ++P++ T T+   AC  ++
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
            + LGR +H  ++K E   D  +   L+ MY+  G ++EA  +F  M  K++++W  +I+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
             + +    +A   +  M  EG+  D+ TL +VL + A    + +  ++H +++KT   S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + NSLID Y KC  V++A+++F+  S  ++V+ TS+I          EAL  + +M+
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +  + P+S    S+L+ACA + A  +GK++H H ++ G   D F  N++++MY +CG   
Sbjct: 494 E-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKV 552

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F+    + + +W+ ++ G AQ G+ K A+++F +MLE  + P+ IT +S+LCAC+
Sbjct: 553 PALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS 611

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            +G+V E   +F  M+ K+ + P  +HYAC++DILGRAG+  +A + +  MP + +A++W
Sbjct: 612 KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL A RI++NVE+G+ AA+ +F  + +    ++LL N+YA  G WD V+KVR  M++ 
Sbjct: 672 GALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L  +PG SW+E+K KV+ F  GD SH++SKEI   LD     + + G+  +  +   ++
Sbjct: 732 GLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEI 791

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
            ES +  +   HSE+ A+AFGLI T PG  I V KNL +C  CH   +FIS IV REI V
Sbjct: 792 -ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISV 850

Query: 752 RDVNRFHHFRNGSCSCG--GYW 771
           RDV  +HHF++G CSCG  GYW
Sbjct: 851 RDVEEYHHFKDGVCSCGDEGYW 872



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 256/480 (53%), Gaps = 4/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C    D+  G ++H  V+  GF+SD  V N+L+ MY KCG+  ++R LFD +P+R 
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ S Y       E +  F  M    + P+  +++++ +AC    +  LGR +HG
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K  +  D+   N+L+ MY+ +G LE+A  VF  +E  D+VSW A+IA  V H+    
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ ++ M+   I P+  T  S L ACA +   +LG +LH   IK  + S  IV   L+D
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  +D A  +F  +  KN+++W  +I G   N    EA   F  M +E +  +  T
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVT 502

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L +VL + A   A+   K++HA +++T    D ++ N+++D Y +CG    A+  F  S 
Sbjct: 503 LISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN-SQ 561

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ A   ++T YAQ G  + A++L+ +M + EI+PD     SLL AC+      +G +
Sbjct: 562 KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLE 621

Query: 421 -VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
             ++   K+    +      +V++  + G +DDA     ++P R   + W A++     H
Sbjct: 622 YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 268/742 (36%), Positives = 443/742 (59%), Gaps = 5/742 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+L+ M+ + GN +D+  +F  + ER V SWN L   Y      +EA+  +  M+ + 
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           IRPN ++  S++  CAG  D   G++IH + I+ G++SD+   NAL+ MY K G++ +A 
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F  +   D +SWNA+I+G   +      L+LF  M+   ++P++ T T+   AC  ++
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
            + LGR +H  ++K E   D  +   L+ MY+  G ++EA  +F  M  K++++W  +I+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
             + +    +A   +  M  EG+  D+ TL +VL + A    + +  ++H +++KT   S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + NSLID Y KC  V++A+++F+  S  ++V+ TS+I          EAL  + +M+
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +  + P+S    S+L+ACA + A  +GK++H H ++ G   D F  N++++MY +CG   
Sbjct: 494 E-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKV 552

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F+    + + +W+ ++ G AQ G+ K A+++F +MLE  + P+ IT +S+LCAC+
Sbjct: 553 PALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS 611

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            +G+V E   +F  M+ K+ + P  +HYAC++DILGRAG+  +A + +  MP + +A++W
Sbjct: 612 KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL A RI++NVE+G+ AA+ +F  + +    ++LL N+YA  G WD V+KVR  M++ 
Sbjct: 672 GALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L  +PG SW+E+K KV+ F  GD SH++SKEI   LD     + + G+  +  +   ++
Sbjct: 732 GLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEI 791

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
            ES +  +   HSE+ A+AFGLI T PG  I V KNL +C  CH   +FIS IV REI V
Sbjct: 792 -ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISV 850

Query: 752 RDVNRFHHFRNGSCSCG--GYW 771
           RDV  +HHF++G CSCG  GYW
Sbjct: 851 RDVEEYHHFKDGVCSCGDEGYW 872



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 256/480 (53%), Gaps = 4/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C    D+  G ++H  V+  GF+SD  V N+L+ MY KCG+  ++R LFD +P+R 
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ S Y       E +  F  M    + P+  +++++ +AC    +  LGR +HG
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K  +  D+   N+L+ MY+ +G LE+A  VF  +E  D+VSW A+IA  V H+    
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ ++ M+   I P+  T  S L ACA +   +LG +LH   IK  + S  IV   L+D
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  +D A  +F  +  KN+++W  +I G   N    EA   F  M +E +  +  T
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVT 502

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L +VL + A   A+   K++HA +++T    D ++ N+++D Y +CG    A+  F  S 
Sbjct: 503 LISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN-SQ 561

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ A   ++T YAQ G  + A++L+ +M + EI+PD     SLL AC+      +G +
Sbjct: 562 KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLE 621

Query: 421 -VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
             ++   K+    +      +V++  + G +DDA     ++P R   + W A++     H
Sbjct: 622 YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/612 (43%), Positives = 393/612 (64%), Gaps = 1/612 (0%)

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+I+G   +     A++ F  M+     P  F ++SA++ACA +   E+G+Q+H
Sbjct: 5   NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 64

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
           C  +K  I S+  VG  L DMY+KCG+M +A  +F  MP K+ ++W  +I G+ + G   
Sbjct: 65  CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 124

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA   F  M  E V  DQ  L + L +  + +A    + VH+  VK  FESD ++ N+L 
Sbjct: 125 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 184

Query: 341 DAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           D Y K G +E A  +F  +S   ++V+ T +I  Y +    E+ L +++E++ + I P+ 
Sbjct: 185 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 244

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F  SSL+ ACAN +A EQG Q+H  ++K  F  D F  + LV+MY KCG ++ A +AF E
Sbjct: 245 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 304

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           I D   ++W++++    QHG GK+A+++F +M++ GV PN IT +S+L  C+HAGLV E 
Sbjct: 305 IGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 364

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
             +F SM+K +G+ P +EHY+C+ID+LGRAG+ +EA E ++ MPF+ NA  W + LGA R
Sbjct: 365 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 424

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           I+ + E+G+ AAE L  +EP+ S   VLLSNIYA+   W++V  VR  M+D  +KK PG 
Sbjct: 425 IHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGY 484

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           SW++V  K + F   D SH R   IY KLD + D +  AGYVP  ++   D+++S KE+L
Sbjct: 485 SWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKL 544

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
           L+ HSE++AVAF LI+ P G  I VKKNLR+CVDCH++ +FISK+  R+IIVRD +RFHH
Sbjct: 545 LHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHH 604

Query: 760 FRNGSCSCGGYW 771
           F +GSCSCG YW
Sbjct: 605 FTDGSCSCGDYW 616



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 233/427 (54%), Gaps = 3/427 (0%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           +P+R++VSW ++ S         EA+  F  M + G  P +F+ SS I ACA  G   +G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +++H  ++K G  S++F  + L DMY+K G + DA  VF+++   D VSW A+I G    
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
              + AL  F++M   E+  +     S L AC  ++  + GR +H S++K+  +SD  VG
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L DMY+K G M+ A  +F +  E +N++++  +I G+++     +  S+F  + R+G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             ++ T S+++K+ A+  A+    Q+HA  +K  F+ D ++ + L+D YGKCG +E A++
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            F E      +A  S+++ + Q GLG++A+K++  M DR + P++    SLL  C++   
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 415 YEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
            E+G      + K +G +      + ++++  + G + +A    + +P +     W + +
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 473 GGLAQHG 479
           G    HG
Sbjct: 421 GACRIHG 427



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 169/305 (55%), Gaps = 1/305 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           ++AC S   + +G Q+H + +  G  S+ FV ++L  MY+KCG   D+ ++F+ +P +  
Sbjct: 48  IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE 107

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++   Y      EEA+  FK+M+   +  ++  L S + AC        GR +H  
Sbjct: 108 VSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSS 167

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK-DIEHPDIVSWNAVIAGCVLHEHNDW 180
            +KLG++SD+F  NAL DMY+K G++E A  VF  D E  ++VS+  +I G V  E  + 
Sbjct: 168 VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK 227

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F +++   I PN FT++S +KACA     E G QLH  ++K+    DP V   LVD
Sbjct: 228 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 287

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG +++A   F  + +   IAWN ++S   Q+G   +A  +F  M   GV  +  T
Sbjct: 288 MYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAIT 347

Query: 301 LSTVL 305
             ++L
Sbjct: 348 FISLL 352



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 169/307 (55%), Gaps = 4/307 (1%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP++NL++W  +ISG  QN    EA   F  M   G    Q   S+ +++ AS  +I + 
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ+H L++K    S+ ++ ++L D Y KCG + DA K+F+E    D V+ T+MI  Y++ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  EEAL  + +M D E+  D  V  S L AC  L A + G+ VH  ++K GF SD F G
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 438 NSLVNMYAKCGSIDDADRAFS-EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           N+L +MY+K G ++ A   F  +   R +VS++ +I G  +  + ++ L +F ++   G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 497 LPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            PN  T  S++ AC N A L    + H + M+  F   P     + ++D+ G+ G  ++A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 298

Query: 556 MELVDTM 562
           ++  D +
Sbjct: 299 IQAFDEI 305



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 8/180 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KAC ++  L  G Q+H  V+   FD D FV++ LV MY KCG    + + FD I + +
Sbjct: 250 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPT 309

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++WNSL S +      ++A+  F+ MV  G++PN  +  S++  C+ +G    G   + 
Sbjct: 310 EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD-YF 368

Query: 121 YSIKLGY----DSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
           YS+   Y      + +S   ++D+  + G L++A      +   P+   W + +  C +H
Sbjct: 369 YSMDKTYGVVPGEEHYS--CVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 426


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 278/759 (36%), Positives = 444/759 (58%), Gaps = 9/759 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H +++  G   +  ++  L+ +Y   G+   SR  FD I ++++ SWNS+ S YV   
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 76  FLEEAV-CFFKEMVLSG---IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
              EA+ C  +   + G   +RP+ ++   ++ AC    D   G+K+H    K+G++ D+
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDV 156

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F A +LV +Y++ G L+ A  VF D+   D+ SWNA+I+G   + +   AL +  +MK  
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            +  +  T  S L  CA  +    G  +H  ++K  + SD  V   L++MY+K G + +A
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           +M+F  M  ++L++WN +I+ + QN     A   F  M   G+  D  T+ ++    +  
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336

Query: 312 QAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
               + + +    ++  +   D ++ N+L++ Y K G++  A  +F +    D ++  ++
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396

Query: 371 ITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +T Y Q GL  EA+  Y  M++ R+  P+     S++ A +++ A +QG ++H  +IK  
Sbjct: 397 VTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNS 456

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D F    L+++Y KCG ++DA   F EIP    V W+A+I  L  HGRG+EALQ+F 
Sbjct: 457 LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFK 516

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            ML + V  +HIT VS+L AC+H+GLV E +  F+ M+K++GI+P  +HY CM+D+LGRA
Sbjct: 517 DMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G  ++A ELV  MP Q +AS+WGALL A +IY N E+G  A++ L  ++ E    +VLLS
Sbjct: 577 GYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLS 636

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA+   W+ V KVR   +D  L+K PG S + V  K   F  G+++H +  EIY +L 
Sbjct: 637 NIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELK 696

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            +S  +   GYVP       D+EE EKEQ+L  HSE+LA+AFG+I+TPP + IR+ KNLR
Sbjct: 697 VLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLR 756

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           +C DCH + ++IS+I  REI+VRD NRFHHF++G CSC 
Sbjct: 757 VCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 261/498 (52%), Gaps = 9/498 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC S  D   G +VH  V   GF+ D FVA SLV +Y++ G    + ++F  +P + 
Sbjct: 130 ILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SWN++ S +        A+     M   G++ +  +++S++  CA S D + G  IH 
Sbjct: 187 VGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHL 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G DSD+F +NAL++MY+K G L+DA  VF  +E  D+VSWN++IA    +     
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPST 306

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           AL+ F+ M+   I P++ T  S     + +  + + R +   +I+ E +  D ++G  LV
Sbjct: 307 ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY--REGVGFD 297
           +MYAK G M+ A  +F  +P K+ I+WN +++G+ QNG   EA   +  M   R+ +  +
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP-N 425

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q T  +++ + +   A+    ++HA  +K +   D ++   LID YGKCG +EDA+ +F 
Sbjct: 426 QGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFY 485

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E      V   ++I +    G GEEAL+L+ +M    +  D     SLL+AC++    ++
Sbjct: 486 EIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDE 545

Query: 418 GKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGL 475
           G++   +   ++G          +V++  + G ++ A      +P +   S W A++   
Sbjct: 546 GQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSAC 605

Query: 476 AQHGRGKEALQMFGQMLE 493
             +G  +       ++LE
Sbjct: 606 KIYGNAELGTLASDRLLE 623



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 148/294 (50%), Gaps = 7/294 (2%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           ++LH  L+      + ++   L+++Y   G +  +R  F  + +KN+ +WN +IS +++ 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 277 GGDMEAASLFPWMYREGVG----FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           G   EA +    ++    G     D  T   +LK+  S       K+VH    K  FE D
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  SL+  Y + G ++ A K+F +    D+ +  +MI+ + Q G    AL +   M+ 
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +  D+   +S+L  CA       G  +H+H++K G  SD F  N+L+NMY+K G + D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           A   F ++  R +VSW+++I    Q+     AL+ F  M   G+ P+ +T+VS+
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 21/299 (7%)

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   K++HAL +      +  +   LI+ Y   G +  +   F      ++ +  S+I+A
Sbjct: 35  VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISA 94

Query: 374 YAQFGLGEEAL----KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           Y +FG   EA+    +L+       + PD +    +L AC +L     GK+VH  + K G
Sbjct: 95  YVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMG 151

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F  D F   SLV++Y++ G +D A + F ++P + + SW+AMI G  Q+G    AL +  
Sbjct: 152 FEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211

Query: 490 QMLEDGVLPNHITLVSVLCACNHA-GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           +M  +GV  + IT+ S+L  C  +  ++     H   +  K G+         +I++  +
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL--KHGLDSDVFVSNALINMYSK 269

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLG----------AARIYKNVEVGQHAAEMLFAI 597
            G+ Q+A  + D M  +   S W +++           A R +K +++G    ++L  +
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVS-WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVV 327



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           ++L N+C N++A    K++H  ++ FG   +      L+N+Y   G I  +   F  I  
Sbjct: 26  NALFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK 82

Query: 463 RGIVSWSAMIGGLAQHGRGKEAL----QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           + I SW+++I    + G+  EA+    Q+F       + P+  T   +L AC    LV  
Sbjct: 83  KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVDG 140

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            K H      K G +      A ++ +  R G    A ++   MP +   S W A++
Sbjct: 141 KKVHCCVF--KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS-WNAMI 194


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 283/778 (36%), Positives = 445/778 (57%), Gaps = 7/778 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D+ +GL VHG+VV TG   D FV N+LV  Y   G   D+ +LFD +PER+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSLLGR 116
           +VSWNS+   +    F EE+     EM+         P+  +L +++  CA   +  LG+
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HG+++KL  D ++   NAL+DMY+K G + +A  +FK   + ++VSWN ++ G     
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372

Query: 177 HNDWALKLFQQMKS--SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                  + +QM +   ++  +  T  +A+  C         ++LHC  +K E   + +V
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               V  YAKCGS+  A+ +FH +  K + +WN +I GH Q+     +      M   G+
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T+ ++L + +  +++ + K+VH   ++   E D ++  S++  Y  CG +     
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F       LV+  ++IT Y Q G  + AL ++ +M    I         +  AC+ L +
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              G++ H + +K     D F   SL++MYAK GSI  + + F+ + ++   SW+AMI G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG  KEA+++F +M   G  P+ +T + VL ACNH+GL+ E   + + M+  FG++P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732

Query: 535 MQEHYACMIDILGRAGKFQEAMELV-DTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
             +HYAC+ID+LGRAG+  +A+ +V + M  +A+  +W +LL + RI++N+E+G+  A  
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF +EPEK   +VLLSN+YA  G W++V KVR+ M +  L+K+ G SWIE+  KV++F V
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           G+R     +EI +    +   ++K GY P   +  HD+ E EK + L  HSEKLA+ +GL
Sbjct: 853 GERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGL 912

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I T  G TIRV KNLRICVDCH + + ISK++ REI+VRD  RFHHF+NG CSCG YW
Sbjct: 913 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 300/587 (51%), Gaps = 18/587 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVV-FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+A   +KD+ +G ++H +V   T   +D+ +   ++ MYA CG+  DSR +FDA+  +
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN++ S Y   +  +E +  F EM+  + + P+ F+   +I ACAG  D  +G  +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  +K G   D+F  NALV  Y   G + DA+ +F  +   ++VSWN++I     +  +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 179 DWALKLFQQMKSSE----INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           + +  L  +M          P++ T  + L  CA      LG+ +H   +K+ +  + ++
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG- 293
              L+DMY+KCG +  A+MIF +   KN+++WN ++ G    G       +   M   G 
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389

Query: 294 -VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  D+ T+   +        +   K++H  S+K  F  ++ + N+ + +Y KCG +  A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            ++F    +  + +  ++I  +AQ      +L  +L+M+   + PDSF   SLL+AC+ L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            +   GK+VH  II+     D F   S++++Y  CG +      F  + D+ +VSW+ +I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G  Q+G    AL +F QM+  G+    I+++ V  AC+   L+   +   E+    + +
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS---LLPSLRLGREA--HAYAL 624

Query: 533 QPMQEH---YAC-MIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           + + E     AC +ID+  + G   ++ ++ + +  ++ AS W A++
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMI 670



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 216/424 (50%), Gaps = 12/424 (2%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGY---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           +L  ++ A     D  +GRKIH     S +L  D  +     ++ MYA  G+ +D+  VF
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL--CTRIITMYAMCGSPDDSRFVF 143

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELK 213
             +   ++  WNAVI+    +E  D  L+ F +M  ++++ P+ FTY   +KACAGM   
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            +G  +H  ++K  +  D  VG  LV  Y   G + +A  +F +MPE+NL++WN +I   
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263

Query: 274 LQNGGDMEAASLFPWMYRE-GVGF---DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
             NG   E+  L   M  E G G    D  TL TVL   A  + IG+ K VH  +VK   
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           + +  + N+L+D Y KCG + +A  IFK ++  ++V+  +M+  ++  G       +  +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383

Query: 390 M--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           M     ++  D     + +  C + S     K++H + +K  F+ +    N+ V  YAKC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           GS+  A R F  I  + + SW+A+IGG AQ    + +L    QM   G+LP+  T+ S+L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503

Query: 508 CACN 511
            AC+
Sbjct: 504 SACS 507



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAFESDDYIV 336
           GD E++S    + RE +G        +L++    + I + +++H L S  T   +DD + 
Sbjct: 71  GDDESSSDAFLLVREALGL-------LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 123

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREI 395
             +I  Y  CG  +D+  +F    + +L    ++I++Y++  L +E L+ ++EM    ++
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            PD F    ++ ACA +S    G  VH  ++K G + D F GN+LV+ Y   G + DA +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE---DGV-LPNHITLVSVLCAC 510
            F  +P+R +VSW++MI   + +G  +E+  + G+M+E   DG  +P+  TLV+VL  C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/814 (36%), Positives = 445/814 (54%), Gaps = 100/814 (12%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC-YVHCDFLEEAVCFFKEM 87
           D  V  SL  +   C N +          ++SV   N  F+   VHC  ++  + F    
Sbjct: 2   DAPVPLSLSTLLELCTNLL----------QKSVNKSNGRFTAQLVHCRVIKSGLVF---- 47

Query: 88  VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS----DMFSANALVDMYAK 143
                  + + +++++N  + +G +L  RK+        +D       FS N ++  YAK
Sbjct: 48  -------SVYLMNNLMNVYSKTGYALHARKL--------FDEMPLRTAFSWNTVLSAYAK 92

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G+++ +   F  +   D VSW  +I G         A+++  +M    I P+ FT T+ 
Sbjct: 93  RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG----------------- 246
           L + A     E G+++H  ++K+ ++ +  V   L++MYAKCG                 
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212

Query: 247 --------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                          MD A   F  M E++++ WN +ISG+ Q G D+ A  +F  M R+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272

Query: 293 G-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
             +  D+ TL++VL + A+ + + + +Q+H+  V T F+    ++N+LI  Y +CG VE 
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332

Query: 352 AVKIFKESSAVDL---------------------------------VACTSMITAYAQFG 378
           A ++ ++    DL                                 VA T+MI  Y Q G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHG 392

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           L  EA+ L+  M   E  P+S+  +++L+  ++L++   GKQ+H   +K G +      N
Sbjct: 393 LYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSN 452

Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           +L+ MYAK GSI  A RAF  I  +R  VSW++MI  LAQHG  +EAL++F  ML +G+ 
Sbjct: 453 ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+HIT V V  AC HAGLV + + +F+ M+    I P   HYACM+D+ GRAG  QEA E
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            ++ MP + +   WG+LL A R+YKN+++G+ AAE L  +EPE S  +  L+N+Y++ G 
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 632

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W+  AK+R+ MKD ++KKE G SWIEVK KV+ F V D  H +  EIY  + ++ D + K
Sbjct: 633 WEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKK 692

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            GYVP   + LHD+EE  KEQ+L HHSEKLA+AFGLI+TP   T+R+ KNLR+C DCHT+
Sbjct: 693 MGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTA 752

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +FISK+V REIIVRD  RFHHF++G CSC  YW
Sbjct: 753 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 257/569 (45%), Gaps = 99/569 (17%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           K+       F    VH  V+ +G     ++ N+L+ +Y+K G  + +R+LFD +P R+  
Sbjct: 22  KSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81

Query: 63  SWNSLFSCYVH-------CDFLE------------------------EAVCFFKEMVLSG 91
           SWN++ S Y         C+F +                        +A+    EM+  G
Sbjct: 82  SWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG 141

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           I P++F+L++++ + A +     G+K+H + +KLG   ++  +N+L++MYAK G+   A 
Sbjct: 142 IEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM----------------------- 188
            VF  +   DI SWNA+IA  +     D A+  F+QM                       
Sbjct: 202 VVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLR 261

Query: 189 ---------KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
                    + S ++P+ FT  S L ACA +E   +G Q+H  ++        IV   L+
Sbjct: 262 ALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALI 321

Query: 240 DMYAKCGS---------------------------------MDEARMIFHLMPEKNLIAW 266
            MY++CG                                  M+EA+ IF  + +++++AW
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAW 381

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I G+ Q+G   EA +LF  M  E    +  TL+ +L   +S  ++G  KQ+H  +VK
Sbjct: 382 TAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALK 385
           +       + N+LI  Y K G +  A + F       D V+ TSMI A AQ G  EEAL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMY 444
           L+  M    + PD      + +AC +     QG+Q    +     +  T +  + +V+++
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
            + G + +A     ++P +  +V+W +++
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 152/613 (24%), Positives = 253/613 (41%), Gaps = 121/613 (19%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD------ 54
           VL +  + + L  G +VH  +V  G   +  V+NSL+ MYAKCG+ + ++ +FD      
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211

Query: 55  -------------------------AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     + ER +V+WNS+ S Y    +   A+  F +M+ 
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA------ 142
            S + P+ F+L+S+++ACA      +G +IH + +  G+D      NAL+ MY+      
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331

Query: 143 ---------------------------KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                                      K+G++ +A  +F  ++  D+V+W A+I G   H
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQH 391

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A+ LF+ M   E  PN +T  + L   + +     G+Q+H S +K        V 
Sbjct: 392 GLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVS 451

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L+ MYAK GS+  A   F L+  E++ ++W  +I    Q+G   EA  LF  M  EG+
Sbjct: 452 NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T       V  F A       HA  V    +  D +              +D  K
Sbjct: 512 RPDHITY------VGVFSAC-----THAGLVNQGRQYFDMM--------------KDVDK 546

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           I    S     AC  M+  + + GL +EA +   +M    I PD     SLL+AC     
Sbjct: 547 IIPTLSH---YAC--MVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVYKN 598

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWS 469
            + GK     ++      ++ A ++L N+Y+ CG  ++A +    + D  +      SW 
Sbjct: 599 IDLGKVAAERLLLLE-PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPN----HITLVSVLCACNHAGLVAEAKHHFES 525
            +          K  +  FG  +EDG+ P     +IT+  +       G V +       
Sbjct: 658 EV----------KHKVHAFG--VEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHD 705

Query: 526 MEKKFGIQPMQEH 538
           +E++   Q ++ H
Sbjct: 706 LEEEVKEQILRHH 718


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 304/824 (36%), Positives = 460/824 (55%), Gaps = 55/824 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS-DEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L++C    DL  G  +H  +V +G  +   F+AN L+ MY+ C +   + RLF A+P R
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEF---------------------- 97
           + VSW +L S         +A+  F  M  +G+ P                         
Sbjct: 86  NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCH 145

Query: 98  --------------------------SLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-D 130
                                      L+S++ +C  +GD   GR +H   +  G  +  
Sbjct: 146 SGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAS 205

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
            F AN L+ MY+   +L  A+ +F  +   + VSW  +++G   +  +  AL  F  M+ 
Sbjct: 206 TFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRR 265

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           + + P  F  +SA +A A +      R    S   +   ++  V   L DMY+KCG + E
Sbjct: 266 AGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLADMYSKCGLLSE 324

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL-FPWMYREG-VGFDQTTLSTVLKSV 308
           A  +F  MP+K+ +AW  +I G+ +NG  +EAA L F  M REG VG DQ    +VL + 
Sbjct: 325 ACRVFDQMPQKDAVAWTAMIDGYAKNG-SLEAAVLSFRDMKREGLVGADQHVFCSVLSAS 383

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVAC 367
              +   + K +H    K  FE +  + N+LID Y K   VE A ++ K +    ++V+ 
Sbjct: 384 GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSG 443

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           TSMI  Y +    EEAL +Y+E++ + + P+ F  SS++  CA  +  EQG Q+H  +IK
Sbjct: 444 TSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK 503

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
              + D+F G++LV+MY KCG I  + + F+EI  R  ++W+A+I   AQHG G+EA+Q 
Sbjct: 504 TDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQA 563

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F +M+  G+ PNHI  VS+L AC+HAGLV E   +F SM++  GI+P +EHY+C+ID  G
Sbjct: 564 FDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYG 623

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           RAG+  EA + +  MP + NA  W +LLGA R+  + E+G+ AA+ L  +EP  +  HV 
Sbjct: 624 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS 683

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LS IYAS G W++V  VR+ M+D+++KK PG SW++   K + F   D SH + K+IY K
Sbjct: 684 LSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEK 743

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L+E++  + + GY+P       ++E+  KE++L +HSE++AVAF LI+ P    I VKKN
Sbjct: 744 LEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKN 803

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LRIC+DCHT+F+FI K+  R+IIVRD +RFHHF NG CSCG YW
Sbjct: 804 LRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 240/533 (45%), Gaps = 63/533 (11%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDI 157
           L+S++ +C  +GD   GR +H   +  G  +   F AN L+ MY+   +L  A+ +F  +
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY----------------- 200
              + VSW  +++G   +  +  AL  F  M+ + + P    Y                 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 201 -------------------------------TSALKACAGMELKELGRQLHCSLI-KMEI 228
                                           S L++C        GR LH  L+     
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            +   +   L+ MY+ C  +  A  +F  MP +N ++W  ++SG  QN    +A + F  
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M R GV   +  LS+  ++ A+  A    +   A S    F+++ ++ ++L D Y KCG 
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTA-SASVGFDTELFVASNLADMYSKCGL 321

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE--INPDSFVCSSLL 406
           + +A ++F +    D VA T+MI  YA+ G  E A+  + +M+ RE  +  D  V  S+L
Sbjct: 322 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK-REGLVGADQHVFCSVL 380

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GI 465
           +A   L      K +H  + K GF  +    N+L++MYAK   ++ A R     P    +
Sbjct: 381 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNV 440

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE-AKHHFE 524
           VS ++MI G  +    +EAL ++ ++   GV PN  T  S++  C    L+ + A+ H +
Sbjct: 441 VSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 500

Query: 525 SMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++       +++ +  + ++D+ G+ G    +M+L + + ++ + + W A++
Sbjct: 501 VIKTDL----IRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVI 548


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 299/778 (38%), Positives = 449/778 (57%), Gaps = 10/778 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++++ T    L  G  VH  ++ T F    F+ N+L+ MY KCG+   + +LFD + + +
Sbjct: 65  LVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSN 124

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V++NSL S YV    L++ +  F +    G++ ++++ +  + AC+ SG+   G+ IHG
Sbjct: 125 IVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHG 184

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G  S +   N+L+DMY+K G ++ A  +F   +  D VSWN++IAG V +   + 
Sbjct: 185 LILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 244

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGM--ELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            L + Q+M  + +  N +T  SALKAC+      K  G  LH   IK+ +  D +VG  L
Sbjct: 245 LLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTAL 304

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----NGGDMEAASLFPWMYREG 293
           +DMYAK GS+D+A  IF  M +KN++ +N +++G LQ     +    +A +LF  M   G
Sbjct: 305 LDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCG 364

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +     T S++LK+    +     KQVHAL  K    SD+YI + LID Y   G + DA+
Sbjct: 365 IKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDAL 424

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
             F     + +V  T+MI  Y Q G  E AL L+ E+   E  PD F+ S+++++CAN+ 
Sbjct: 425 LCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMG 484

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               G+Q+  H  K G    T   NS + MYAK G +  A+  F ++ +  IVSWS MI 
Sbjct: 485 MLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMIC 544

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             AQHG   EAL+ F  M   G+ PNH   + VL AC+H GLV E   +F++MEK + ++
Sbjct: 545 SNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMK 604

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
              +H  C++D+LGRAG+  +A  L+  + F+    +W ALL A RI+K+    Q  A+ 
Sbjct: 605 LHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQK 664

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +  +EP  S+++VLL NIY  AG     +KVR  M++ ++KKEPG+SWI++ DKVY+F  
Sbjct: 665 VIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVS 724

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GDRSH  S +IYAKLDE   +L     +   +  L    E E    + +HSEKLAVAFG+
Sbjct: 725 GDRSHKNSGQIYAKLDE---MLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGV 781

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +     A +RV KNLRIC+DCH + +  S +  RE+IVRD  RFHHF++GSCSCG YW
Sbjct: 782 LYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 286/743 (38%), Positives = 426/743 (57%), Gaps = 15/743 (2%)

Query: 44  GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEA--VCFFKEMVLSGIRPNEFSLSS 101
           G+   +  LFD IP   V ++N L   Y        A  +  ++ M+   + PN ++   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
            + AC+   D   GR IH ++I  G  +D+F + AL+DMY K   L DA  +F  +   D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 162 IVSWNAVIAGCVLH--EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
           +V+WNA++AG   H   H+  A  L  QM+   + PN  T  + L   A       G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 220 HCSLIKMEIKSDP----------IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           H   I+  + S+           ++G  L+DMYAKCGS+  AR +F  MP +N + W+ +
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           I G +      +A  LF  M  +G+ F   T++++ L++ AS   + + +Q+HAL  K+ 
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             +D    NSL+  Y K G ++ A+ +F E +  D V+ +++++ Y Q G  EEA  ++ 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +MQ   + PD+    SL+ AC++L+A + G+  H  +I  G  S+T   N+L++MYAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ID + + F+ +P R IVSW+ MI G   HG GKEA  +F +M   G  P+ +T + +L 
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H+GLV E KH F  M   +G+ P  EHY CM+D+L R G   EA E + +MP +A+ 
Sbjct: 551 ACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            VW ALLGA R+YKN+++G+  + M+  + PE +   VLLSNIY++AG +D  A+VR   
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K    KK PG SWIE+   ++ F  GD+SH +S EIY +LD +   + K GY P     L
Sbjct: 671 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVL 730

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
            D+EE EKE+ L  HSEKLA+A+G+++     TI V KNLR+C DCHT  + IS +  R 
Sbjct: 731 QDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRA 790

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD NRFHHF+NG CSCG +W
Sbjct: 791 IIVRDANRFHHFKNGQCSCGDFW 813



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/517 (29%), Positives = 259/517 (50%), Gaps = 26/517 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC++  D   G  +H   +  G  +D FV+ +L+ MY KC    D+  +F  +P R +
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191

Query: 62  VSWNSLFSCYVHCDFLEEAVCFF--KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V+WN++ + Y H      AV      +M +  +RPN  +L +++   A  G    G  +H
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251

Query: 120 GYSIKLGYDSDMFS----------ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            Y I+    S+  S            AL+DMYAK G+L  A  VF  +   + V+W+A+I
Sbjct: 252 AYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALI 311

Query: 170 AGCVLHEHNDWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
            G VL      A  LF+ M +     ++P   +  SAL+ACA ++   +G QLH  L K 
Sbjct: 312 GGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKS 369

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            + +D   G  L+ MYAK G +D+A  +F  M  K+ ++++ ++SG++QNG   EA  +F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M    V  D  T+ +++ + +   A+   +  H   +     S+  I N+LID Y KC
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSS 404
           G ++ + ++F    + D+V+  +MI  Y   GLG+EA  L+LEM +    PD  +F+C  
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC-- 547

Query: 405 LLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           LL+AC++     +GK   HV    +G          +V++ ++ G +D+A      +P R
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607

Query: 464 GIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGV 496
             V  W A++G    +     GK+  +M  ++  +G 
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 644



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+    L  G   HG V+  G  S+  + N+L+ MYAKCG    SR++F+ +P R 
Sbjct: 447 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 506

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK--- 117
           +VSWN++ + Y      +EA   F EM   G  P+  +   +++AC+ SG  + G+    
Sbjct: 507 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFH 566

Query: 118 --IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
              HGY    G    M     +VD+ ++ G L++A    + +    D+  W A++  C +
Sbjct: 567 VMRHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622

Query: 175 HEHNDWALKLFQQMKSSEINP 195
           +++ D   K+ + ++  E+ P
Sbjct: 623 YKNIDLGKKVSRMIQ--ELGP 641


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/699 (37%), Positives = 419/699 (59%), Gaps = 9/699 (1%)

Query: 77  LEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
           + EA C    ++   SGI  + F  +S+I++          ++IH   + LG     F  
Sbjct: 1   MSEASCLASPLLYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLI 56

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
             L+   +  G++  A  VF D+  P I  WNA+I G   + H   AL ++  M+ + ++
Sbjct: 57  TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+ FT+   LKAC+G+   ++GR +H  + ++   +D  V  GL+ +YAKC  +  AR +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176

Query: 255 FH--LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
           F    +PE+ +++W  ++S + QNG  MEA  +F  M +  V  D   L +VL +    Q
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   + +HA  VK   E +  ++ SL   Y KCG V  A  +F +  + +L+   +MI+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA+ G   EA+ ++ EM ++++ PD+   +S ++ACA + + EQ + ++ ++ +  +  
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D F  ++L++M+AKCGS++ A   F    DR +V WSAMI G   HGR +EA+ ++  M 
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             GV PN +T + +L ACNH+G+V E    F  M     I P Q+HYAC+ID+LGRAG  
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHL 475

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            +A E++  MP Q   +VWGALL A + +++VE+G++AA+ LF+I+P  +  +V LSN+Y
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A+A +WD VA+VR  MK+  L K+ G SW+EV+ ++  F VGD+SH R +EI  +++ + 
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             L + G+V   +  LHD+ + E E+ L  HSE++A+A+GLI+TP G  +R+ KNLR CV
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +CH + + ISK+V REI+VRD NRFHHF++G CSCG YW
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 233/466 (50%), Gaps = 3/466 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  ++  G     F+   L+   +  G+   +R++FD +P   +  WN++   Y   +
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             ++A+  +  M L+ + P+ F+   ++ AC+G     +GR +H    +LG+D+D+F  N
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            L+ +YAK   L  A  VF+ +  P+  IVSW A+++    +     AL++F QM+  ++
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+     S L A   ++  + GR +H S++KM ++ +P + + L  MYAKCG +  A++
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M   NLI WN +ISG+ +NG   EA  +F  M  + V  D  ++++ + + A   +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   + ++    ++ +  D +I ++LID + KCG VE A  +F  +   D+V  ++MI  
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y   G   EA+ LY  M+   ++P+      LL AC +     +G      +        
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQ 458

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                 ++++  + G +D A      +P   G+  W A++    +H
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 233/469 (49%), Gaps = 26/469 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           +LKAC+    L +G  VH  V   GFD+D FV N L+ +YAKC     +R +F+ +P  E
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R++VSW ++ S Y       EA+  F +M    ++P+  +L S++NA     D   GR I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K+G + +     +L  MYAK G +  A  +F  ++ P+++ WNA+I+G   + + 
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ +F +M + ++ P+  + TSA+ ACA +   E  R ++  + + + + D  +   L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DM+AKCGS++ AR++F    +++++ W+ +I G+  +G   EA SL+  M R GV  + 
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-------LIDAYGKCGHVED 351
            T   +L +       G+ ++      + A    D+ +N        +ID  G+ GH++ 
Sbjct: 425 VTFLGLLMAC---NHSGMVREGWWFFNRMA----DHKINPQQQHYACVIDLLGRAGHLDQ 477

Query: 352 AVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
           A ++ K    +       A  S    +    LGE A +    +     N   +V  S L 
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS--NTGHYVQLSNLY 535

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           A A L  +++  +V V + + G   D   G S V +  +  +    D++
Sbjct: 536 AAARL--WDRVAEVRVRMKEKGLNKDV--GCSWVEVRGRLEAFRVGDKS 580


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 286/774 (36%), Positives = 463/774 (59%), Gaps = 4/774 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   +D+  G ++H ++V  G+ S  F+ N+LV MYAK  +   +RRLFD   E+ 
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V WNS+ S Y       E +  F+EM ++G  PN +++ S + AC G   + LG++IH
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307

Query: 120 GYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
              +K   + S+++  NAL+ MY + G +  A  + + + + D+V+WN++I G V +   
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL+ F  M ++    +  + TS + A   +     G +LH  +IK    S+  VG  L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY+KC         F  M +K+LI+W  VI+G+ QN   +EA  LF  + ++ +  D+
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             L ++L++ +  +++ + K++H   ++     D  I N L+D YGKC ++  A ++F+ 
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFES 546

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ TSMI++ A  G   EA++L+  M +  ++ DS     +L+A A+LSA  +G
Sbjct: 547 IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 606

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H ++++ GF  +     ++V+MYA CG +  A   F  I  +G++ +++MI     H
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GK A+++F +M  + V P+HI+ +++L AC+HAGL+ E +   + ME ++ ++P  EH
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 726

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y C++D+LGRA    EA E V  M  +  A VW ALL A R +   E+G+ AA+ L  +E
Sbjct: 727 YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELE 786

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+     VL+SN++A  G W++V KVR  MK + ++K PG SWIE+  KV+ FT  D+SH
Sbjct: 787 PKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 846

Query: 659 ARSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
             SKEIY KL EV+  L +  GYV   +  LH+V+E EK Q+L+ HSE++A+A+GL+ TP
Sbjct: 847 PESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTP 906

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             A +R+ KNLR+C DCHT  + +SK+  R+I++RD NRFHHF +G CSCG  W
Sbjct: 907 DRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 178/603 (29%), Positives = 299/603 (49%), Gaps = 50/603 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIV--VFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           VL+ C  ++ +  G Q+H  +   F  F+ D F+A  LV MY KCG+  D+ ++FD +P+
Sbjct: 86  VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+  +WN++   YV       A+  +  M + G+     S  +++ ACA   D   G ++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEH 177
           H   +KLGY S  F  NALV MYAK  +L  A  +F    E  D V WN++++       
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGV 236
           +   L+LF++M  +   PN +T  SAL AC G    +LG+++H S++K    S  + V  
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+ MY +CG M +A  I   M   +++ WN +I G++QN    EA   F  M   G   
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D+ ++++++ +      +    ++HA  +K  ++S+  + N+LID Y KC       + F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 DL++ T++I  YAQ     EAL+L+ ++  + +  D  +  S+L A + L +  
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
             K++H HI++ G + DT   N LV++Y KC ++  A R F  I  + +VSW++MI   A
Sbjct: 505 IVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSV------------------------------ 506
            +G   EA+++F +M+E G+  + + L+ +                              
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623

Query: 507 -------LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
                  + AC   G +  AK  F+ +E+K  +Q     Y  MI+  G  G  + A+EL 
Sbjct: 624 IAVAVVDMYAC--CGDLQSAKAVFDRIERKGLLQ-----YTSMINAYGMHGCGKAAVELF 676

Query: 560 DTM 562
           D M
Sbjct: 677 DKM 679



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 172/329 (52%), Gaps = 5/329 (1%)

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMY 242
           FQ++  SE N  +  +   L+ C        GRQLH  + K     + D + G  LV MY
Sbjct: 68  FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMY 126

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
            KCGS+D+A  +F  MP++   AWN +I  ++ NG    A +L+  M  EGV    ++  
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSA 361
            +LK+ A  + I    ++H+L VK  + S  +IVN+L+  Y K   +  A ++F      
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D V   S++++Y+  G   E L+L+ EM      P+S+   S L AC   S  + GK++
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306

Query: 422 HVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           H  ++K     S+ +  N+L+ MY +CG +  A+R   ++ +  +V+W+++I G  Q+  
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
            KEAL+ F  M+  G   + +++ S++ A
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAA 395


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 290/768 (37%), Positives = 441/768 (57%), Gaps = 84/768 (10%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N  +  + + G   D+ RLF A+P RS  ++N++ + Y     L +A+ FF+ +     R
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----R 166

Query: 94  PNEFSLSSMINACAGSGDSLLGRKI---------------------HG------YSIKLG 126
           P+ FS +++++A   S      R +                     HG      +   L 
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA 226

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
            + D  S N ++  Y + G +++A  +F      D +SWNA++AG V     + A K+F 
Sbjct: 227 PEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFN 286

Query: 187 QMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           +M   ++     ++ + +   A   ++ E  R    + I+     D      +V  YA+ 
Sbjct: 287 KMPQRDV----VSWNTMVSGYARRGDMAEARRLFDVAPIR-----DVFTWTAIVSGYAQN 337

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G ++EA+ +F  MP+KN ++WN +++ ++Q     EA  LF  M                
Sbjct: 338 GMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAM--------------PC 383

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           ++VAS+                         N+++  Y + G +++A  IF      D V
Sbjct: 384 RNVASW-------------------------NTMLTGYAQAGMLDEARAIFGMMPQKDAV 418

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           +  +M+ AY+Q G  EE L+L+ EM      +N  +F C  +L+ CA+++A E G Q+H 
Sbjct: 419 SWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLHS 476

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
            +IK G+    F GN+L+ MY KCGS+++A  AF E+ +R +VSW+ MI G A+HG GKE
Sbjct: 477 RLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKE 536

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL++F  M +    P+ ITLV VL AC+H+GLV +   +F SM + FG+    EHY CMI
Sbjct: 537 ALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMI 596

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+LGRAG+  EA+ L+  MPF+ ++++WGALLGA+RI++N E+G++AAE +F +EPE + 
Sbjct: 597 DLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAG 656

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +VLLSNIYAS+G W +V K+R  M +  +KK PG SWIEV++KV+TF+VGD  H   ++
Sbjct: 657 MYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPERED 716

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           IYA L+++   + KAGYV   +  LHDVEE EKE +L +HSEKLAVA+G++  PPG  IR
Sbjct: 717 IYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIR 776

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V KNLR+C DCHT+F+ IS I  R II+RD NRFHHFR+GSCSCG YW
Sbjct: 777 VIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 55/469 (11%)

Query: 18  HGIVVFTG--FD----SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           HG+V      FD     D    N ++  Y + G   ++R LFD+  E   +SWN+L + Y
Sbjct: 213 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGY 272

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V    +EEA   F +M    +     S ++M++  A  GD    R++      +    D+
Sbjct: 273 VQRSQIEEAQKMFNKMPQRDV----VSWNTMVSGYARRGDMAEARRL----FDVAPIRDV 324

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F+  A+V  YA+ G LE+A  VF  +   + VSWNA++A  V     + A +LF  M   
Sbjct: 325 FTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR 384

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
               N+ ++ + L                                     YA+ G +DEA
Sbjct: 385 ----NVASWNTMLTG-----------------------------------YAQAGMLDEA 405

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           R IF +MP+K+ ++W  +++ + Q G   E   LF  M R G   +++  + VL + A  
Sbjct: 406 RAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADI 465

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+    Q+H+  +K  +    ++ N+L+  Y KCG +E+A   F+E    D+V+  +MI
Sbjct: 466 AALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMI 525

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGF 430
             YA+ G G+EAL+++  M+     PD      +L AC++    E+G      + + FG 
Sbjct: 526 AGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGV 585

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            +       ++++  + G +D+A     ++P +     W A++G    H
Sbjct: 586 ATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIH 634



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 7/214 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L  G+Q+H  ++  G+    FV N+L+ MY KCG+  ++   F+ + ER 
Sbjct: 458 VLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERD 517

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VVSWN++ + Y    F +EA+  F  M  +  +P++ +L  ++ AC+ SG  L+ + I +
Sbjct: 518 VVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSG--LVEKGISY 575

Query: 120 GYSI--KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            YS+    G  +       ++D+  + G L++AV + KD+   PD   W A++    +H 
Sbjct: 576 FYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHR 635

Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           +++      +++   E  N  M+   S + A +G
Sbjct: 636 NSELGRNAAEKIFELEPENAGMYVLLSNIYASSG 669



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 145/318 (45%), Gaps = 28/318 (8%)

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P+  +I  N  I+ H++ G   +A  LF  M R       +T +T+L   A + A G   
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST----STYNTML---AGYAANGRLP 155

Query: 319 QVHALS-VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           Q  ALS  ++    D +  N+L+ A G    + D   +F E    D V+   MI+++A  
Sbjct: 156 Q--ALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANH 213

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           GL    + L     D     D+   + +L A       ++ +++     ++    D  + 
Sbjct: 214 GL----VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEW----DAISW 265

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           N+L+  Y +   I++A + F+++P R +VSW+ M+ G A+ G   EA ++F    +   +
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF----DVAPI 321

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            +  T  +++      G++ EAK  F++M  K  +      +  M+    +    +EA E
Sbjct: 322 RDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVS-----WNAMMAAYVQRRMMEEAKE 376

Query: 558 LVDTMPFQANASVWGALL 575
           L D MP + N + W  +L
Sbjct: 377 LFDAMPCR-NVASWNTML 393


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/659 (41%), Positives = 396/659 (60%), Gaps = 9/659 (1%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSWNAVIAGCVL 174
           +IH   +     + + + N L+ +YAK G++   + +F    HP  ++V+W  +I     
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 AL  F +M+++ I PN FT+++ L ACA   L   G+Q+H  + K    +DP V
Sbjct: 178 SNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFV 237

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-- 292
              L+DMYAKCGSM  A  +F  MP +NL++WN +I G ++N     A  +F    RE  
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF----REVL 293

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +G DQ ++S+VL + A    +   KQVH   VK       Y+ NSL+D Y KCG  EDA
Sbjct: 294 SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDA 353

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            K+F      D+V    MI    +    E+A   +  M    + PD    SSL +A A++
Sbjct: 354 TKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASI 413

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +A  QG  +H H++K G + ++   +SLV MY KCGS+ DA + F E  +  +V W+AMI
Sbjct: 414 AALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMI 473

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
               QHG   EA+++F +ML +GV+P +IT VSVL AC+H G + +   +F SM     I
Sbjct: 474 TVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNI 533

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P  EHYACM+D+LGR G+ +EA   +++MPF+ ++ VWGALLGA   + NVE+G+  AE
Sbjct: 534 KPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAE 593

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            LF +EP+    ++LLSNIY   GM +   +VRR M  N ++KE G SWI+VK++ + F 
Sbjct: 594 RLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFN 653

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
             DRSH+R++EIY  L ++ +L+ + GYV   +   + VE SE EQ L+ HSEKLA+AFG
Sbjct: 654 ANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSE-EQSLWCHSEKLALAFG 712

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           L+  PPG+ +R+KKNLR C DCHT  +F S+I  REIIVRD+NRFH F NGSCSC  YW
Sbjct: 713 LLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 296/557 (53%), Gaps = 26/557 (4%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS--VVSWNS 66
           K L    Q+H  +V T   +     N+L+++YAKCG+   +  LF+  P  S  VV+W +
Sbjct: 111 KSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTT 170

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           L +     +   +A+ FF  M  +GI PN F+ S+++ ACA +     G++IH    K  
Sbjct: 171 LINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHC 230

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           + +D F A AL+DMYAK G++  A  VF ++ H ++VSWN++I G V ++    A+ +F+
Sbjct: 231 FLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFR 290

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           ++ S  + P+  + +S L ACAG+   + G+Q+H S++K  +     V   LVDMY KCG
Sbjct: 291 EVLS--LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCG 348

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
             ++A  +F    +++++ WN++I G  +     +A + F  M REGV  D+ + S++  
Sbjct: 349 LFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFH 408

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + AS  A+     +H+  +KT    +  I +SL+  YGKCG + DA ++F+E+   ++V 
Sbjct: 409 ASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVC 468

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-----KQV 421
            T+MIT + Q G   EA+KL+ EM +  + P+     S+L+AC++    + G        
Sbjct: 469 WTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMA 528

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR 480
           +VH IK G   + +A   +V++  + G +++A R    +P +   + W A++G   +H  
Sbjct: 529 NVHNIKPGL--EHYA--CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHAN 584

Query: 481 ---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
              G+E  +   ++  D   P +  L+S +      G++ EA    + + +  GI  +++
Sbjct: 585 VEMGREVAERLFKLEPDN--PGNYMLLSNIYI--RHGMLEEA----DEVRRLMGINGVRK 636

Query: 538 HYAC-MIDILGRAGKFQ 553
              C  ID+  R   F 
Sbjct: 637 ESGCSWIDVKNRTFVFN 653



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 218/463 (47%), Gaps = 54/463 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L  G Q+H ++    F +D FVA +L+ MYAKCG+ + +  +FD +P R+
Sbjct: 206 ILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRN 265

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+   +V       A+  F+E++  G  P++ S+SS+++ACAG  +   G+++HG
Sbjct: 266 LVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHG 323

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G    ++  N+LVDMY K G  EDA  +F      D+V+WN +I GC    + + 
Sbjct: 324 SIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQ 383

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A   FQ M    + P+  +Y+S   A A +     G  +H  ++K     +  +   LV 
Sbjct: 384 ACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVT 443

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGSM +A  +F    E N++ W  +I+   Q+G   EA  LF  M  EGV  +  T
Sbjct: 444 MYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYIT 503

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL                                    A    G ++D  K F   +
Sbjct: 504 FVSVL-----------------------------------SACSHTGKIDDGFKYFNSMA 528

Query: 361 AVDLV-------ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            V  +       AC  M+    + G  EEA +    ++     PDS V  +LL AC   +
Sbjct: 529 NVHNIKPGLEHYAC--MVDLLGRVGRLEEACRF---IESMPFEPDSLVWGALLGACGKHA 583

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDAD 454
             E G++V   + K   +     GN ++  N+Y + G +++AD
Sbjct: 584 NVEMGREVAERLFK---LEPDNPGNYMLLSNIYIRHGMLEEAD 623


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/699 (37%), Positives = 419/699 (59%), Gaps = 9/699 (1%)

Query: 77  LEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
           + EA C    ++   SGI  + F  +S+I++          ++IH   + LG     F  
Sbjct: 1   MSEASCLASPLLYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLI 56

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
             L+   +  G++  A  VF D+  P I  WNA+I G   + H   AL ++  M+ + ++
Sbjct: 57  TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+ FT+   LKAC+G+   ++GR +H  + ++   +D  V  GL+ +YAKC  +  AR +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176

Query: 255 FH--LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
           F    +PE+ +++W  ++S + QNG  MEA  +F  M +  V  D   L +VL +    Q
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQ 236

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   + +HA  VK   E +  ++ SL   Y KCG V  A  +F +  + +L+   +MI+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA+ G   EA+ ++ EM ++++ PD+   +S ++ACA + + EQ + ++ ++ +  +  
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D F  ++L++M+AKCGS++ A   F    DR +V WSAMI G   HGR +EA+ ++  M 
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             GV PN +T + +L ACNH+G+V E    F  M     I P Q+HYAC+ID+LGRAG  
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADH-KINPQQQHYACVIDLLGRAGHL 475

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            +A E++  MP Q   +VWGALL A + +++VE+G++AA+ LF+I+P  +  +V LSN+Y
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A+A +WD VA+VR  MK+  L K+ G SW+EV+ ++  F VGD+SH R +EI  +++ + 
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             L + G+V   +  LHD+ + E E+ L  HSE++A+A+GLI+TP G  +R+ KNLR CV
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +CH + + ISK+V REI+VRD NRFHHF++G CSCG YW
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 235/472 (49%), Gaps = 15/472 (3%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  ++  G     F+   L+   +  G+   +R++FD +P   +  WN++   Y   +
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             ++A+  +  M L+ + P+ F+   ++ AC+G     +GR +H    +LG+D+D+F  N
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            L+ +YAK   L  A  VF+ +  P+  IVSW A+++    +     AL++F  M+  ++
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDV 218

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+     S L A   ++  + GR +H S++KM ++ +P + + L  MYAKCG +  A++
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M   NLI WN +ISG+ +NG   EA  +F  M  + V  D  ++++ + + A   +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   + ++    ++ +  D +I ++LID + KCG VE A  +F  +   D+V  ++MI  
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y   G   EA+ LY  M+   ++P+      LL AC +     +G         F  M+D
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF------FNLMAD 452

Query: 434 TFAGNS------LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                       ++++  + G +D A      +P   G+  W A++    +H
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 224/462 (48%), Gaps = 12/462 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           +LKAC+    L +G  VH  V   GFD+D FV N L+ +YAKC     +R +F+ +P  E
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R++VSW ++ S Y       EA+  F  M    ++P+  +L S++NA     D   GR I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K+G + +     +L  MYAK G +  A  +F  ++ P+++ WNA+I+G   + + 
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ +F +M + ++ P+  + TSA+ ACA +   E  R ++  + + + + D  +   L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DM+AKCGS++ AR++F    +++++ W+ +I G+  +G   EA SL+  M R GV  + 
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK- 357
            T   +L +      +        L               +ID  G+ GH++ A ++ K 
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484

Query: 358 ---ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
              +       A  S    +    LGE A +    +     N   +V  S L A A L  
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS--NTGHYVQLSNLYAAARL-- 540

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           +++  +V V + + G   D   G S V +  +  +    D++
Sbjct: 541 WDRVAEVRVRMKEKGLNKDV--GCSWVEVRGRLEAFRVGDKS 580


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/759 (37%), Positives = 439/759 (57%), Gaps = 11/759 (1%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  +V +    +  ++  LV +Y   GN   +R  FD I  R V +WN + S Y    +
Sbjct: 73  LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132

Query: 77  LEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             E + CF   M+ SG++P+  +  S++ AC    D   G KIH  ++K G+  D++ A 
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAA 189

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ +Y + G + +A  +F ++   D+ SWNA+I+G     +   AL L   +++ +   
Sbjct: 190 SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMD--- 246

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
              T  S L AC        G  +H   IK  ++S+  V   L+D+YA+ GS+ + + +F
Sbjct: 247 -SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  ++LI+WN +I  +  N   + A  LF  M    +  D  TL ++   ++    I 
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIR 365

Query: 316 VCKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            C+ V   +++   F  D  I N+++  Y K G V+ A  +F      D+++  ++I+ Y
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGY 425

Query: 375 AQFGLGEEALKLY--LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AQ G   EA+++Y  +E +  EI+ +     S+L AC+   A  QG ++H  ++K G   
Sbjct: 426 AQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 485

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D F G SL +MY KCG +DDA   F +IP    V W+ +I     HG G++A+ +F +ML
Sbjct: 486 DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           ++GV P+HIT V++L AC+H+GLV E +  FE M+  +GI P  +HY CM+D+ GRAG+ 
Sbjct: 546 DEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQL 605

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           + A+  + +MP Q +AS+WGALL A R++ NV++G+ A+E LF +EPE    HVLLSN+Y
Sbjct: 606 EIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 665

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           ASAG W+ V ++R       L+K PG S +EV +KV  F  G+++H   +E+Y +L  + 
Sbjct: 666 ASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALH 725

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
           + L   GYVP     L DVE+ EKE +L  HSE+LA+AF LI TP   TIR+ KNLR+C 
Sbjct: 726 EKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCG 785

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH+  +FISKI  REIIVRD NRFHHF+NG CSCG YW
Sbjct: 786 DCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/490 (31%), Positives = 260/490 (53%), Gaps = 24/490 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC +  D   G ++H + +  GF  D +VA SL+ +Y + G  +++R LFD +P R 
Sbjct: 159 VLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRD 215

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIH 119
           + SWN++ S Y      +EA+      +  G+R  +  ++ S+++AC  +GD   G  IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            YSIK G +S++F +N L+D+YA+ G+L+D   VF  +   D++SWN++I    L+E   
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC------SLIKMEIKSDPI 233
            A+ LFQ+M+ S I P+  T  S         L +LG    C      +L K     D  
Sbjct: 331 RAILLFQEMRLSRIQPDCLTLISLASI-----LSQLGEIRACRSVQGFTLRKGWFLEDIT 385

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +G  +V MYAK G +D AR +F+ +P K++I+WN +ISG+ QNG   EA  ++  M  EG
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445

Query: 294 --VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
             +  +Q T  +VL + +   A+    ++H   +K     D ++  SL D YGKCG ++D
Sbjct: 446 GEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDD 505

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A+ +F +   V+ V   ++I  +   G GE+A+ L+ EM D  + PD     +LL+AC++
Sbjct: 506 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 565

Query: 412 LSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WS 469
               ++G+    +    +G          +V++Y + G ++ A      +P +   S W 
Sbjct: 566 SGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWG 625

Query: 470 AMIGGLAQHG 479
           A++     HG
Sbjct: 626 ALLSACRVHG 635



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 12/262 (4%)

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K +HA  V +    +  I   L++ Y   G+V  A   F      D+ A   MI+ Y + 
Sbjct: 71  KCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRA 130

Query: 378 GLGEEALKLY-LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
           G   E ++ + L M    + PD     S+L AC N++    G ++H   +KFGFM D + 
Sbjct: 131 GYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGFMWDVYV 187

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             SL+++Y + G++ +A   F E+P R + SW+AMI G  Q G  KEAL      L DG+
Sbjct: 188 AASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALT-----LSDGL 242

Query: 497 LP-NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
              + +T+VS+L AC  AG          S   K G++        +ID+    G  ++ 
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGV-TIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDC 301

Query: 556 MELVDTMPFQANASVWGALLGA 577
            ++ D M +  +   W +++ A
Sbjct: 302 QKVFDRM-YVRDLISWNSIIKA 322



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 2/181 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G+++HG ++  G   D FV  SL  MY KCG   D+  LF  IP  +
Sbjct: 458 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVN 517

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
            V WN+L +C+      E+AV  FKEM+  G++P+  +  ++++AC+ SG    G     
Sbjct: 518 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFE 577

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
                 G    +     +VD+Y + G LE A+   K +   PD   W A+++ C +H + 
Sbjct: 578 MMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNV 637

Query: 179 D 179
           D
Sbjct: 638 D 638



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 9/173 (5%)

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           +L   C NL   +  K +H  ++    + +      LVN+Y   G++  A   F  I +R
Sbjct: 59  TLFRYCTNL---QSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQ-MLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
            + +W+ MI G  + G   E ++ F   ML  G+ P++ T  SVL AC +        + 
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN----VTDGNK 171

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              +  KFG        A +I +  R G    A  L D MP +   S W A++
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS-WNAMI 223


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 286/743 (38%), Positives = 425/743 (57%), Gaps = 15/743 (2%)

Query: 44  GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEA--VCFFKEMVLSGIRPNEFSLSS 101
           G+   +  LFD IP   V ++N L   Y        A  +  ++ M+   + PN ++   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
            + AC+   D   GR IH ++I  G  +D+F + AL+DMY K   L DA  +F  +   D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 162 IVSWNAVIAGCVLH--EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
           +V+WNA++AG   H   H+  A  L  QM+   + PN  T  + L   A       G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 220 HCSLI----------KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           H   I          K ++    ++G  L+DMYAKCGS+  AR +F  MP +N + W+ +
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           I G +      +A  LF  M  +G+ F   T++++ L++ AS   + + +Q+HAL  K+ 
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             +D    NSL+  Y K G ++ A+ +F E +  D V+ +++++ Y Q G  EEA  ++ 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +MQ   + PD+    SL+ AC++L+A + G+  H  +I  G  S+T   N+L++MYAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ID + + F+ +P R IVSW+ MI G   HG GKEA  +F +M   G  P+ +T + +L 
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H+GLV E KH F  M   +G+ P  EHY CM+D+L R G   EA E + +MP +A+ 
Sbjct: 551 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            VW ALLGA R+YKN+++G+  + M+  + PE +   VLLSNIY++AG +D  A+VR   
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K    KK PG SWIE+   ++ F  GD+SH +S EIY +LD +   + K GY P     L
Sbjct: 671 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVL 730

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
            D+EE EKE+ L  HSEKLA+A+G+++     TI V KNLR+C DCHT  + IS +  R 
Sbjct: 731 QDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRA 790

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD NRFHHF+NG CSCG +W
Sbjct: 791 IIVRDANRFHHFKNGQCSCGDFW 813



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 258/517 (49%), Gaps = 26/517 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC++  D   G  +H   +  G  +D FV+ +L+ MY KC    D+  +F  +P R +
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191

Query: 62  VSWNSLFSCYVHCDFLEEAVCFF--KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V+WN++ + Y H      AV      +M +  +RPN  +L +++   A  G    G  +H
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251

Query: 120 GYSIKLGYDSDMFS----------ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            Y I+     +  S            AL+DMYAK G+L  A  VF  +   + V+W+A+I
Sbjct: 252 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALI 311

Query: 170 AGCVLHEHNDWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
            G VL      A  LF+ M +     ++P   +  SAL+ACA ++   +G QLH  L K 
Sbjct: 312 GGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKS 369

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            + +D   G  L+ MYAK G +D+A  +F  M  K+ ++++ ++SG++QNG   EA  +F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M    V  D  T+ +++ + +   A+   +  H   +     S+  I N+LID Y KC
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSS 404
           G ++ + ++F    + D+V+  +MI  Y   GLG+EA  L+LEM +    PD  +F+C  
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC-- 547

Query: 405 LLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           LL+AC++     +GK   HV    +G          +V++ ++ G +D+A      +P R
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607

Query: 464 GIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGV 496
             V  W A++G    +     GK+  +M  ++  +G 
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 644



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+    L  G   HG V+  G  S+  + N+L+ MYAKCG    SR++F+ +P R 
Sbjct: 447 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 506

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           +VSWN++ + Y      +EA   F EM   G  P+  +   +++AC+ SG  + G+    
Sbjct: 507 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFH 566

Query: 119 ---HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
              HGY    G    M     +VD+ ++ G L++A    + +    D+  W A++  C +
Sbjct: 567 VMGHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622

Query: 175 HEHNDWALKLFQQMKSSEINP 195
           +++ D   K+ + ++  E+ P
Sbjct: 623 YKNIDLGKKVSRMIQ--ELGP 641


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/775 (35%), Positives = 446/775 (57%), Gaps = 5/775 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSD---EFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           VL+ C+  + L  G + H +V  +    D     +   LV+MY KCG+  ++RR+FD +P
Sbjct: 97  VLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMP 156

Query: 58  ERSVVS-WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           + S V  W +L S Y     L E V  F++M   G+RP+ +++S ++   AG G    G 
Sbjct: 157 QVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGE 216

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HG   KLG+ S     NAL+  YAK    +DA+ VF  + H D++SWN++I+GC  + 
Sbjct: 217 VVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNG 276

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             D A++LF +M       +  T  S L ACA + L  LGR +H   +K    S   +  
Sbjct: 277 LYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN 336

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+DMY+ C        IF  M +KN+++W  +I+ + + G   + A LF  M  EG   
Sbjct: 337 VLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   +++ L + A  + +   K VH  +++   E    + N+L++ Y KCG++E+A  IF
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
               + D+++  ++I  Y++  L  EA  L+ EM   ++ P++   + +L A A+LS+ E
Sbjct: 457 DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLE 515

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G+++H + ++ G++ D F  N+L++MY KCG++  A R F  + ++ ++SW+ M+ G  
Sbjct: 516 RGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG 575

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HGRG++A+ +F QM   G+ P+  +  ++L AC+H+GL  E    F++M K+  I+P  
Sbjct: 576 MHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRL 635

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +HY CM+D+L   G  +EA E +D+MP + ++S+W +LL   RI++NV++ +  AE +F 
Sbjct: 636 KHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFE 695

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EPE +  +VLL+NIYA A  W+ V K++  +    L++  G SWIE K KV+ F   +R
Sbjct: 696 LEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNR 755

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           +H +   I   L+EV+  + + G+ P  +  L   + +   + L  HS KLAVAFG++  
Sbjct: 756 NHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNL 815

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G  IRV KN R+C  CH + +FISK+ SREII+RD NRFHHF  G CSC GYW
Sbjct: 816 SEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/684 (38%), Positives = 412/684 (60%), Gaps = 4/684 (0%)

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           SG  P   + +S++  CA   D   GR +H      G   +  +A AL +MYAK     D
Sbjct: 219 SGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD 278

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACA 208
           A  VF  +   D V+WNA++AG   +   + A+ +  +M+  +   P+  T  S L ACA
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
             +     R++H   ++        V   ++D+Y KCG++D AR +F  M ++N ++WN 
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G+ +NG   EA +LF  M  EGV     ++   L +      +   ++VH L V+  
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            ES+  ++N+LI  Y KC   + A ++F E      V+  +MI    Q G  E+A++L+ 
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            MQ   + PDSF   S++ A A++S   Q + +H + I+     D +   +L++MYAKCG
Sbjct: 519 RMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCG 578

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +  A   F+   DR +++W+AMI G   HG GK A+++F +M   G +PN  T +SVL 
Sbjct: 579 RVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLS 638

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+HAGLV E + +F SM++ +G++P  EHY  M+D+LGRAGK  EA   +  MP +   
Sbjct: 639 ACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGI 698

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           SV+GA+LGA +++KNVE+ + +A+ +F +EPE+   HVLL+NIYA+A +W +VA+VR  M
Sbjct: 699 SVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAM 758

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD- 687
           +   L+K PG S +++K++++TF  G  +H ++K+IYA+L ++ + +   GYVP  +TD 
Sbjct: 759 EKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVP--DTDS 816

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           +HDVE+  K QLL  HSEKLA+A+GLI T PG TI++KKNLR+C DCH + + IS +  R
Sbjct: 817 IHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGR 876

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EII+RD+ RFHHF++G CSCG YW
Sbjct: 877 EIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 272/540 (50%), Gaps = 13/540 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C ++ DL  G  VH  +   G   +   A +L  MYAKC    D+RR+FD +P R 
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARD 290

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            V+WN+L + Y      E AV     M    G RP+  +L S++ ACA +      R++H
Sbjct: 291 RVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVH 350

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            ++++ G+D  +  + A++D+Y K G ++ A  VF  ++  + VSWNA+I G   +    
Sbjct: 351 AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDAT 410

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LF++M    ++    +  +AL AC  +   + GR++H  L+++ ++S+  V   L+
Sbjct: 411 EALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALI 470

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY KC   D A  +F  +  K  ++WN +I G  QNG   +A  LF  M  E V  D  
Sbjct: 471 TMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSF 530

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL +++ ++A        + +H  S++   + D Y++ +LID Y KCG V  A  +F  +
Sbjct: 531 TLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSA 590

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               ++   +MI  Y   G G+ A++L+ EM+     P+     S+L+AC++    ++G+
Sbjct: 591 RDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQ 650

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
           +    + + +G         ++V++  + G + +A     ++P + GI  + AM+G    
Sbjct: 651 EYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKL 710

Query: 478 HGR----GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           H       + A ++F    E+GV   H+ L ++     +A L  +      +MEKK G+Q
Sbjct: 711 HKNVELAEESAQRIFELEPEEGVY--HVLLANIYA---NASLWKDVARVRTAMEKK-GLQ 764



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 178/331 (53%), Gaps = 2/331 (0%)

Query: 181 ALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL  F  M  +S   P + T+TS LK CA       GR +H  L    +  + +    L 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQ 298
           +MYAKC    +AR +F  MP ++ +AWN +++G+ +NG    A  +   M  E G   D 
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL +VL + A  QA+G C++VHA +V+  F+    +  +++D Y KCG V+ A K+F  
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               + V+  +MI  YA+ G   EAL L+  M    ++       + L+AC  L   ++G
Sbjct: 388 MQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           ++VH  +++ G  S+    N+L+ MY KC   D A + F E+  +  VSW+AMI G  Q+
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN 507

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           G  ++A+++F +M  + V P+  TLVS++ A
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPA 538


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 292/807 (36%), Positives = 446/807 (55%), Gaps = 62/807 (7%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F S   +   +V  Y  CG    +  + + +     V WN L   ++    L+ A+    
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+ +G R + F+L  ++ AC        G   HG     G++S++F  NALV MY++ G
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 146 NLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDW-ALKLFQQM------KSSEINP 195
           +LE+A  +F +I      D++SWN++++  V    N W AL LF +M      K +    
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERS 225

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           ++ +  + L AC  ++     +++H + I+     D  VG  L+D YAKCG M+ A  +F
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS------------- 302
           ++M  K++++WN +++G+ Q+G    A  LF  M +E +  D  T +             
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345

Query: 303 ----------------------TVLKSVASFQAIGVCKQVHALSVKTAF---------ES 331
                                 +VL + AS  A     ++HA S+K            E 
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405

Query: 332 DDYIV-NSLIDAYGKCGHVEDAVKIFKESS--AVDLVACTSMITAYAQFGLGEEALKLYL 388
           +D +V N+LID Y KC   + A  IF +      ++V  T MI  +AQ+G   +ALKL++
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 465

Query: 389 EM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT--FAGNSLVNMY 444
           EM  +   + P+++  S +L ACA+L+A   GKQ+H ++++      +  F  N L+NMY
Sbjct: 466 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 525

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCG +D A   F  +  +  +SW++M+ G   HGRG EAL +F +M + G +P+ IT +
Sbjct: 526 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 585

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            VL AC+H G+V +   +F+SM   +G+ P  EHYA  ID+L R G+  +A + V  MP 
Sbjct: 586 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 645

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           +  A VW ALL A R++ NVE+ +HA   L  +  E   ++ L+SNIYA+AG W +VA++
Sbjct: 646 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 705

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  MK + +KK PG SW++ +    +F VGDRSH  S +IYA L+ + D +   GYVP  
Sbjct: 706 RHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 765

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
              LHDV+E EK  LL  HSEKLA+A+GL+ T PG  IR+ KNLR+C DCH++F +ISKI
Sbjct: 766 NFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKI 825

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V  EI+VRD +RFHHF+NGSCSCGGYW
Sbjct: 826 VDHEIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 265/555 (47%), Gaps = 62/555 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC        G   HG++   GF+S+ F+ N+LV MY++CG+  ++  +FD I +R 
Sbjct: 123 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 182

Query: 61  ---VVSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGD 111
              V+SWNS+ S +V       A+  F +M L      +  R +  S+ +++ AC     
Sbjct: 183 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 242

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
               +++HG +I+ G   D+F  NAL+D YAK G +E+AV VF  +E  D+VSWNA++AG
Sbjct: 243 VPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 302

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYT------------------------------ 201
                +   A +LF+ M+   I  +M T+T                              
Sbjct: 303 YSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPN 362

Query: 202 -----SALKACAGMELKELGRQLHCSLIKMEIKS----------DPIVGVGLVDMYAKCG 246
                S L ACA +     G ++H   +K  + +          D +V   L+DMY+KC 
Sbjct: 363 CVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 422

Query: 247 SMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTLS 302
           S   AR IF  +P  E+N++ W ++I GH Q G   +A  LF  M  E  GV  +  T+S
Sbjct: 423 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 482

Query: 303 TVLKSVASFQAIGVCKQVHALSVK-TAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESS 360
            +L + A   AI + KQ+HA  ++   ++S  Y V N LI+ Y KCG V+ A  +F   S
Sbjct: 483 CILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS 542

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               ++ TSM+T Y   G G EAL ++ +M+     PD      +L AC++    +QG  
Sbjct: 543 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 602

Query: 421 VHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               +   +G           +++ A+ G +D A +   ++P +   V W A++     H
Sbjct: 603 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 662

Query: 479 GRGKEALQMFGQMLE 493
              + A     +++E
Sbjct: 663 SNVELAEHALNKLVE 677


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/698 (39%), Positives = 423/698 (60%), Gaps = 1/698 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+  +D  LG+QVHG++V  GF  D    ++L+ MYAKC    DS ++F  IP ++
Sbjct: 182 VLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKN 241

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V W+++ +  V  D     +  FKEM   GI  ++   +S+  +CAG     +G ++H 
Sbjct: 242 WVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHA 301

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + SD+    A +DMYAK G+L DA  +F  +    +  +NA+I GCV +E    
Sbjct: 302 HALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFE 361

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+ FQ +  S +  N  + + A  ACA ++    GRQLH   +K  ++S+  V   ++D
Sbjct: 362 ALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILD 421

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++ EA  +F  M  ++ ++WN VI+ H QNG + E  +LF  M R  +  DQ T
Sbjct: 422 MYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFT 481

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ +S QA+    ++H   +K+    D ++  +LID Y KCG +E+A KI     
Sbjct: 482 YGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIE 541

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++I  +      E+A   + EM    + PD+F  + +L+ACANL++   GKQ
Sbjct: 542 QQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQ 601

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK    SD +  ++LV+MY+KCG++ D+   F + P++  V+W+AMI G AQHG 
Sbjct: 602 IHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGL 661

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+EAL  F +M  + V PNH T VS+L AC H G + +  H+F +M  ++G++P  EHY+
Sbjct: 662 GEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYS 721

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMIDI+GR+G+  EA++L+  MPF+A+A +W  LL   +I+ N+E+ + A   +  +EPE
Sbjct: 722 CMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPE 781

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS  +LLSNIYA AGMW  V+++R+ M+ NKLKKEPG SWIEVKD+V+ F VG+++H R
Sbjct: 782 DSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPR 841

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            +EIY  L  + D +   GY+P ++  L D E  E EQ
Sbjct: 842 YEEIYKILSVLLDEMKWIGYIPDIDF-LIDEESEEYEQ 878



 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/609 (29%), Positives = 323/609 (53%), Gaps = 38/609 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C+    L  G Q H  ++ +GF  D +++N L+ MY +C +   + ++F+ + +R 
Sbjct: 49  IIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRD 108

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPN--------------- 95
           V+S+N++ S Y     +  A  FF +           +LSG   N               
Sbjct: 109 VISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGR 168

Query: 96  -------EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                  + + + ++ AC+   D  LG ++HG  +++G+  D+ + +AL+DMYAK   L+
Sbjct: 169 SEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLD 228

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           D++ +F +I   + V W+A+IAGCV ++ +   L+LF++M+   I  +   Y S  ++CA
Sbjct: 229 DSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCA 288

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G+   ++G QLH   +K +  SD  VG   +DMYAKCGS+ +A+ IF+ +P+ +L  +N 
Sbjct: 289 GLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNA 348

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G ++N    EA   F  + + G+GF++ +LS    + AS +     +Q+H+LSVK+ 
Sbjct: 349 IIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKST 408

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+  + NS++D YGKC  + +A  +F E    D V+  ++I A+ Q G  EE L L+ 
Sbjct: 409 LRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFA 468

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M    + PD F   S+L AC++  A   G ++H  IIK G   D+F G +L++MY KCG
Sbjct: 469 SMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCG 528

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            I++A +    I  + +VSW+A+I G       ++A   F +ML+  V P++ T   VL 
Sbjct: 529 MIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLD 588

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQA 566
           AC +   V   K     + K   ++   + Y  + ++D+  + G  Q++  + +  P   
Sbjct: 589 ACANLASVGLGKQIHGQIIK---LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP-NK 644

Query: 567 NASVWGALL 575
           +   W A++
Sbjct: 645 DFVTWNAMI 653



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 252/521 (48%), Gaps = 36/521 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + S +I  C+       G++ H   I  G+  D++ +N L+ MY +  +L  A  VF+ +
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 158 EHPDIVSWNAVIAGCV----LHEHNDW---------------------------ALKLFQ 186
              D++S+N +I+G      ++  N++                           ++ +F 
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 187 QM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            M +S E+  +  T+   LKAC+ +E   LG Q+H  +++M    D + G  L+DMYAKC
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
             +D++  IF  +P KN + W+ +I+G +QN   +    LF  M + G+G  Q+  ++V 
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           +S A   A+ V  Q+HA ++K  F SD  +  + +D Y KCG + DA +IF       L 
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
              ++I    +   G EAL+ +  +    +  +    S   +ACA++     G+Q+H   
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +K    S+    NS+++MY KC ++ +A   F E+  R  VSW+A+I    Q+G  +E L
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETL 464

Query: 486 QMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
            +F  ML   + P+  T  SVL AC +   L +  + H   ++   G+         +ID
Sbjct: 465 NLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG--GALID 522

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           +  + G  +EA ++ D +  Q   S W A++    + K+ E
Sbjct: 523 MYCKCGMIEEAKKIHDRIEQQTMVS-WNAIIAGFTLLKHSE 562



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 217/449 (48%), Gaps = 36/449 (8%)

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           Q   +++   + T++  ++ C+     + G+Q H  +I      D  +   L+ MY +C 
Sbjct: 33  QQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCS 92

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGH-------------------------------LQ 275
            ++ A  +F  M ++++I++N +ISG+                               LQ
Sbjct: 93  HLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQ 152

Query: 276 NGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           NG   ++  +F  M R E VGFDQTT + VLK+ +  +  G+  QVH L V+  F  D  
Sbjct: 153 NGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVV 212

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
             ++L+D Y KC  ++D++KIF E    + V  +++I    Q       L+L+ EMQ   
Sbjct: 213 TGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVG 272

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           I     + +S+  +CA LSA + G Q+H H +K  F SD   G + ++MYAKCGS+ DA 
Sbjct: 273 IGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQ 332

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           R F+ +P   +  ++A+I G  ++ +G EALQ F  +L+ G+  N I+L     AC    
Sbjct: 333 RIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIK 392

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
              + +    S+  K  ++        ++D+ G+     EA  + D M  + +A  W A+
Sbjct: 393 GDLDGR-QLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDAVSWNAV 450

Query: 575 LGAARIYKNVE--VGQHAAEMLFAIEPEK 601
           + A     N E  +   A+ +   +EP++
Sbjct: 451 IAAHEQNGNEEETLNLFASMLRLRMEPDQ 479


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/736 (36%), Positives = 426/736 (57%), Gaps = 66/736 (8%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           +++  C  + +    + +H + IK     + F  N L+  YAK+G++  A  VF  + HP
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 161 DIVSWNAVI----------------------------------AGCVLHEHNDWALKLFQ 186
           ++ SWN ++                                  AGC L   +  A  L  
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +   S  N N  T+++ L   +     +LGRQ+H  ++K    S   VG  LVDMY+K G
Sbjct: 134 KNDGS-FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192

Query: 247 SMDEARMIFHLMPEKNL-------------------------------IAWNIVISGHLQ 275
            +  AR +F  +PEKN+                               I+W  +I+G  Q
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG D +A  +F  M  E +  DQ T  +VL +     A+   KQVHA  ++T ++ + ++
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            ++L+D Y KC +++ A  +FK+ +  ++V+ T+M+  Y Q G  EEA+K + +MQ   I
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            PD F   S++++CANL++ E+G Q H   +  G +S     N+LV +Y KCGSI+D+ R
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F+EI  +  V+W+A++ G AQ G+  E + +F  ML  G+ P+ +T + VL AC+ AGL
Sbjct: 433 LFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGL 492

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V +    FESM  + GI P+Q+HY CMID+  RAG+ +EA   ++ MPF  +A  W  LL
Sbjct: 493 VEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLL 552

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
            + R Y N+++G+ AAE L  ++P  ++++VLLS++YA+ G W+ VA++R+ M+D  L+K
Sbjct: 553 SSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRK 612

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           EPG SWI+ K++V+ F+  D+S+  S +IY++L++++  + K GYVP + + LHDV +SE
Sbjct: 613 EPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSE 672

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K ++L HHSEKLA+AFGL+  PPG  IRV KNLR+C DCH + ++ISKI +REI+VRD  
Sbjct: 673 KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTA 732

Query: 756 RFHHFRNGSCSCGGYW 771
           RFH F++G+CSCG +W
Sbjct: 733 RFHLFKDGTCSCGDFW 748



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 260/514 (50%), Gaps = 39/514 (7%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--G 91
           N+++  Y+K G   +   LFDA+P R  VSWNSL S Y  C  + ++V  +  M+ +   
Sbjct: 79  NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG------ 145
              N  + S+++   +  G   LGR+IHG+ +K G+ S +F  + LVDMY+K+G      
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198

Query: 146 -------------------------NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                     +ED+  +F ++   D +SW ++I G   +  +  
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ +F++MK   +  + +T+ S L AC G+   + G+Q+H  +I+ + K +  V   LVD
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++  A  +F  M  KN+++W  ++ G+ QNG   EA   F  M + G+  D  T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L +V+ S A+  ++    Q HA ++ +   S   + N+L+  YGKCG +ED+ ++F E S
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V  T++++ YAQFG   E + L+  M    + PD      +L+AC+     E+G Q
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQ 498

Query: 421 VHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +   +I + G +        +++++++ G I++A    +++P     +SW+ ++     +
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558

Query: 479 GR---GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           G    GK A + F   L+     +++ L SV  A
Sbjct: 559 GNMDIGKWAAE-FLMELDPHNTASYVLLSSVYAA 591



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/567 (26%), Positives = 261/567 (46%), Gaps = 84/567 (14%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           LG Q+HG VV  GF S  FV + LV MY+K G    +R++FD +PE++VV +N+L    +
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220

Query: 73  HCDFLE-------------------------------EAVCFFKEMVLSGIRPNEFSLSS 101
            C  +E                               +A+  F+EM L  ++ ++++  S
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++ AC G      G+++H Y I+  Y  ++F A+ALVDMY K  N++ A AVFK +   +
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN 340

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +VSW A++ G   + +++ A+K F  M+   I P+ FT  S + +CA +   E G Q H 
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHA 400

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             +   + S   V   LV +Y KCGS++++  +F+ +  K+ + W  ++SG+ Q G   E
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANE 460

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
              LF  M   G+  D+ T             IGV   + A S     E  + I  S+I+
Sbjct: 461 TIGLFESMLAHGLKPDKVTF------------IGV---LSACSRAGLVEKGNQIFESMIN 505

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            +G    ++D                T MI  +++ G  EEA     +M     +PD+  
Sbjct: 506 EHGIVP-IQDHY--------------TCMIDLFSRAGRIEEARNFINKM---PFSPDAIS 547

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            ++LL++C      + GK     +++     +T +   L ++YA  G  ++  R   ++ 
Sbjct: 548 WATLLSSCRFYGNMDIGKWAAEFLMELD-PHNTASYVLLSSVYAAKGKWEEVARLRKDMR 606

Query: 462 DRGI-----VSWSAMIGGL----AQHGRGKEALQMFGQ-------MLEDGVLPNHITLVS 505
           D+G+      SW      +    A       + Q++ +       M+++G +P+   + S
Sbjct: 607 DKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD---MNS 663

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGI 532
           VL     +  +    HH E +   FG+
Sbjct: 664 VLHDVGDSEKIKMLNHHSEKLAIAFGL 690



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 217/469 (46%), Gaps = 70/469 (14%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y + LK C         + LH  +IK     +  +   L+  YAK GS+  A  +F  MP
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGF---------------------- 296
             NL +WN ++S + + G   E   LF  M  R+GV +                      
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 297 ----------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK- 345
                     ++ T ST+L   +    + + +Q+H   VK  F S  ++ + L+D Y K 
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 346 ------------------------------CGHVEDAVKIFKESSAVDLVACTSMITAYA 375
                                         CG VED+ ++F E    D ++ TSMIT + 
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q GL  +A+ ++ EM+   +  D +   S+L AC  + A ++GKQVH +II+  +  + F
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             ++LV+MY KC +I  A+  F ++  + +VSW+AM+ G  Q+G  +EA++ F  M + G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 496 VLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           + P+  TL SV+ +C N A L   A+ H  ++    G+         ++ + G+ G  ++
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTS--GLISFITVSNALVTLYGKCGSIED 429

Query: 555 AMELVDTMPFQANASVWGALL-GAARIYK-NVEVGQHAAEMLFAIEPEK 601
           +  L + + F+   + W AL+ G A+  K N  +G   + +   ++P+K
Sbjct: 430 SHRLFNEISFKDEVT-WTALVSGYAQFGKANETIGLFESMLAHGLKPDK 477



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G QVH  ++ T +  + FVA++LV MY KC N   +  +F  +  ++
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN 340

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++   Y    + EEAV  F +M   GI P++F+L S+I++CA       G + H 
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHA 400

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G  S +  +NALV +Y K G++ED+  +F +I   D V+W A+++G       + 
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANE 460

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
            + LF+ M +  + P+  T+   L AC+   L E G Q+  S+I  E    PI      +
Sbjct: 461 TIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN-EHGIVPIQDHYTCM 519

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
           +D++++ G ++EAR   + MP   + I+W  ++S
Sbjct: 520 IDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/740 (37%), Positives = 433/740 (58%), Gaps = 36/740 (4%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N ++  Y K GN  ++R+LFD + ER+ V+W  L   Y   +  +EA   F +M   G 
Sbjct: 81  TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 140

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            P+  +  ++++ C G        ++    IKLGYDS +   N LVD Y K   L+ A  
Sbjct: 141 EPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQ 200

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +FK  E P+I S                                 FT+ + L A  G++ 
Sbjct: 201 LFK--EMPEIDS---------------------------------FTFAAVLCANIGLDD 225

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             LG+Q+H  +IK     +  V   L+D Y+K  S+ +AR +F  MPE++ +++N++ISG
Sbjct: 226 IVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISG 285

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           +  +G    A  LF  +        Q   +T+L   ++     + +Q+HA ++ T  +S+
Sbjct: 286 YAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE 345

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             + NSL+D Y KCG  E+A  IF   +    V  T+MI+AY Q G  EE L+L+ +M+ 
Sbjct: 346 ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 405

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +  D    +SLL A A++++   GKQ+H  IIK GFMS+ F+G++L+++YAKCGSI D
Sbjct: 406 ASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKD 465

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A + F E+PDR IVSW+AMI   AQ+G  +  L+ F +M+  G+ P+ ++ + VL AC+H
Sbjct: 466 AVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSH 525

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           +GLV E   HF SM + + + P +EHYA ++D+L R+G+F EA +L+  MP   +  +W 
Sbjct: 526 SGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS 585

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++L A RI+KN E+ + AA+ LF +E  + ++ +V +SNIYA+AG W+NV+KV + M+D 
Sbjct: 586 SVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDR 645

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            +KK P  SW+E+K + + F+  DR H + +EI  K+D ++  + + GY P     LH+ 
Sbjct: 646 GVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNE 705

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E  K + L +HSE+LA+AF LI+TP G+ I V KNLR C+DCH + + ISKIV REI V
Sbjct: 706 DEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITV 765

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD  RFHHFR+G CSCG +W
Sbjct: 766 RDSTRFHHFRDGFCSCGDFW 785



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 232/465 (49%), Gaps = 33/465 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A     D+ LG Q+H  V+ T F  + FV+N+L+  Y+K  + ID+R+LFD +PE+ 
Sbjct: 216 VLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 275

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + S Y      + A   F+E+  +     +F  ++M++  + + D  +GR+IH 
Sbjct: 276 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 335

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I    DS++   N+LVDMYAK G  E+A  +F ++ H   V W A+I+  V     + 
Sbjct: 336 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEE 395

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF +M+ + +  +  T+ S L+A A +    LG+QLH  +IK    S+   G  L+D
Sbjct: 396 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLD 455

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCGS+ +A   F  MP++N+++WN +IS + QNG   EA +           F +  
Sbjct: 456 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG---EAEATLK-------SFKEMV 505

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS +     SF  +GV   + A S     E   +  NS+   Y      E        +S
Sbjct: 506 LSGLQPDSVSF--LGV---LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY------AS 554

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VD++ C S        G   EA KL  EM    I+PD  + SS+LNAC      E  ++
Sbjct: 555 VVDML-CRS--------GRFNEAEKLMAEM---PIDPDEIMWSSVLNACRIHKNQELARR 602

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               +     + D     ++ N+YA  G  ++  +    + DRG+
Sbjct: 603 AADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 254/575 (44%), Gaps = 107/575 (18%)

Query: 21  VVFTGFDSD---------EFVANS----------------------LVVMYAKCGNFIDS 49
           +V TGFD D          F+ N                       ++  Y K GN  ++
Sbjct: 38  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97

Query: 50  RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
           R+LFD + ER+ V+W  L   Y   +  +EA   F +M   G  P+  +  ++++ C G 
Sbjct: 98  RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 157

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS----- 164
                  ++    IKLGYDS +   N LVD Y K   L+ A  +FK  E P+I S     
Sbjct: 158 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFK--EMPEIDSFTFAA 215

Query: 165 ---------------------------WNAVIAGCVL-----HEHNDWALKLFQQMKSSE 192
                                      WN  ++  +L     H+    A KLF +M   +
Sbjct: 216 VLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 275

Query: 193 -------------------------------INPNMFTYTSALKACAGMELKELGRQLHC 221
                                           +   F + + L   +     E+GRQ+H 
Sbjct: 276 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 335

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             I     S+ +VG  LVDMYAKCG  +EA MIF  +  ++ + W  +IS ++Q G   E
Sbjct: 336 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEE 395

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
              LF  M +  V  DQ T +++L++ AS  ++ + KQ+H+  +K+ F S+ +  ++L+D
Sbjct: 396 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLD 455

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            Y KCG ++DAV+ F+E    ++V+  +MI+AYAQ G  E  LK + EM    + PDS  
Sbjct: 456 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 515

Query: 402 CSSLLNACANLSAYEQGK---QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
              +L+AC++    E+G         I K     + +A  S+V+M  + G  ++A++  +
Sbjct: 516 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA--SVVDMLCRSGRFNEAEKLMA 573

Query: 459 EIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           E+P D   + WS+++     H   + A +   Q+ 
Sbjct: 574 EMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF 608



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 173/419 (41%), Gaps = 74/419 (17%)

Query: 195 PNMFTYTSALKACAGMELKELG----RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           PN     ++L + A ++  +L       +   ++K     D       V  + K G + +
Sbjct: 6   PNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQ 65

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW------------- 288
           AR +F  MP KN ++ N++ISG++++G   EA  LF          W             
Sbjct: 66  ARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQF 125

Query: 289 ---------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
                    M R G   D  T  T+L      +      QV    +K  ++S   + N+L
Sbjct: 126 KEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTL 185

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D+Y K   ++ A ++FKE   +                                   DS
Sbjct: 186 VDSYCKSNRLDLACQLFKEMPEI-----------------------------------DS 210

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F  +++L A   L     G+Q+H  +IK  F+ + F  N+L++ Y+K  S+ DA + F E
Sbjct: 211 FTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDE 270

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC-ACNHAGLVAE 518
           +P++  VS++ +I G A  G+ K A  +F ++             ++L  A N       
Sbjct: 271 MPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG 330

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            + H +++      + +  +   ++D+  + GKF+EA E++ T     +A  W A++ A
Sbjct: 331 RQIHAQTIVTTADSEILVGN--SLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 386


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/707 (39%), Positives = 417/707 (58%), Gaps = 2/707 (0%)

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           L + Y+  +   +A   +  M  +    + F + S++ AC      LLG+++HG+ +K G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           +  D+F  NAL+ MY++VG+L  A  +F  IE+ D+VSW+ +I         D AL L +
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI--KSDPIVGVGLVDMYAK 244
            M    + P+     S     A +   +LG+ +H  +++     KS   +   L+DMY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           C ++  AR +F  + + ++I+W  +I+ ++      E   LF  M  EG+  ++ T+ ++
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           +K   +  A+ + K +HA +++  F     +  + ID YGKCG V  A  +F    + DL
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           +  ++MI++YAQ    +EA  +++ M    I P+     SLL  CA   + E GK +H +
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSY 454

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           I K G   D     S V+MYA CG ID A R F+E  DR I  W+AMI G A HG G+ A
Sbjct: 455 IDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAA 514

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           L++F +M   GV PN IT +  L AC+H+GL+ E K  F  M  +FG  P  EHY CM+D
Sbjct: 515 LELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVD 574

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGRAG   EA EL+ +MP + N +V+G+ L A +++KN+++G+ AA+   ++EP KS  
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGY 634

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           +VL+SNIYASA  W +VA +RR MKD  + KEPG+S IEV   ++ F +GDR H  +K++
Sbjct: 635 NVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKV 694

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y  +DE+ + L  AGY P V   LH++++ +K   L +HSEKLA+A+GLI+T PG  IR+
Sbjct: 695 YEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRI 754

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH + + +SKI  REIIVRD NRFHHF+ GSCSC  YW
Sbjct: 755 VKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 241/466 (51%), Gaps = 3/466 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC       LG +VHG VV  GF  D FV N+L++MY++ G+   +R LFD I  + 
Sbjct: 130 VLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKD 189

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW+++   Y     L+EA+   ++M +  ++P+E  + S+ +  A   D  LG+ +H 
Sbjct: 190 VVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHA 249

Query: 121 YSIKLGY--DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           Y ++ G    S +    AL+DMY K  NL  A  VF  +    I+SW A+IA  +   + 
Sbjct: 250 YVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNL 309

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           +  ++LF +M    + PN  T  S +K C      ELG+ LH   ++       ++    
Sbjct: 310 NEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAF 369

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY KCG +  AR +F     K+L+ W+ +IS + QN    EA  +F  M   G+  ++
Sbjct: 370 IDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNE 429

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+ ++L   A   ++ + K +H+   K   + D  +  S +D Y  CG ++ A ++F E
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE 489

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           ++  D+    +MI+ +A  G GE AL+L+ EM+   + P+       L+AC++    ++G
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEG 549

Query: 419 KQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           K++ H  + +FGF         +V++  + G +D+A      +P R
Sbjct: 550 KRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 192/389 (49%), Gaps = 7/389 (1%)

Query: 10  DLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSL 67
           DL LG  +H  V+  G    S   +  +L+ MY KC N   +RR+FD + + S++SW ++
Sbjct: 240 DLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAM 299

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
            + Y+HC+ L E V  F +M+  G+ PNE ++ S++  C  +G   LG+ +H ++++ G+
Sbjct: 300 IAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGF 359

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
              +  A A +DMY K G++  A +VF   +  D++ W+A+I+    +   D A  +F  
Sbjct: 360 TLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVH 419

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M    I PN  T  S L  CA     E+G+ +H  + K  IK D I+    VDMYA CG 
Sbjct: 420 MTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGD 479

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +D A  +F    ++++  WN +ISG   +G    A  LF  M   GV  +  T    L +
Sbjct: 480 IDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHA 539

Query: 308 VASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            +    +   K++ H +  +  F         ++D  G+ G +++A ++ K       +A
Sbjct: 540 CSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA 599

Query: 367 CTSMITA----YAQFGLGEEALKLYLEMQ 391
                 A    +    LGE A K +L ++
Sbjct: 600 VFGSFLAACKLHKNIKLGEWAAKQFLSLE 628



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 144/266 (54%), Gaps = 1/266 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C +   L LG  +H   +  GF     +A + + MY KCG+   +R +FD+   + 
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++ W+++ S Y   + ++EA   F  M   GIRPNE ++ S++  CA +G   +G+ IH 
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K G   DM    + VDMYA  G+++ A  +F +    DI  WNA+I+G  +H H + 
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA 513

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LV 239
           AL+LF++M++  + PN  T+  AL AC+   L + G++L   ++     +  +   G +V
Sbjct: 514 ALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMV 573

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIA 265
           D+  + G +DEA  +   MP +  IA
Sbjct: 574 DLLGRAGLLDEAHELIKSMPMRPNIA 599



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 157/315 (49%), Gaps = 8/315 (2%)

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           + +I+ +++N    +AA ++ +M       D   + +VLK+     +  + ++VH   VK
Sbjct: 93  SFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVK 152

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
             F  D ++ N+LI  Y + G +  A  +F +    D+V+ ++MI +Y + GL +EAL L
Sbjct: 153 NGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDL 212

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG--FMSDTFAGNSLVNMY 444
             +M    + P      S+ +  A L+  + GK +H ++++ G    S      +L++MY
Sbjct: 213 LRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMY 272

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
            KC ++  A R F  +    I+SW+AMI          E +++F +ML +G+ PN IT++
Sbjct: 273 VKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITML 332

Query: 505 SVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
           S++  C  AG +   K  H F ++   F +  +       ID+ G+ G  + A  + D+ 
Sbjct: 333 SLVKECGTAGALELGKLLHAF-TLRNGFTLSLVLA--TAFIDMYGKCGDVRSARSVFDSF 389

Query: 563 PFQANASVWGALLGA 577
               +  +W A++ +
Sbjct: 390 K-SKDLMMWSAMISS 403


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/699 (37%), Positives = 421/699 (60%), Gaps = 9/699 (1%)

Query: 77  LEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
           + EA C     +   SGI  + F  +S+I++          R+IH   + LG     F  
Sbjct: 1   MSEASCLASPFLYTNSGIHSDSF-YASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLI 56

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
             L+   +  G++  A  VF D+  P +  WNA+I G   + H   AL ++ +M+ + ++
Sbjct: 57  TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS 116

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+ FT+   LKAC G+   ++GR +H  + ++  ++D  V  GL+ +YAKC  +  AR +
Sbjct: 117 PDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTV 176

Query: 255 FH--LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
           F    +PE+ +++W  ++S + QNG  +EA  +F  M +  V  D   L +VL +    Q
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQ 236

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   + +HA  +K   E++  ++ SL   Y KCG V  A  +F +  + +L+   +MI+
Sbjct: 237 DLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA+ G  ++A+ L+ EM ++++ PD+   +S ++ACA + + EQ + +  ++ +  +  
Sbjct: 297 GYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRD 356

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D F  ++L++M+AKCGS++ A   F    DR +V WSAMI G   HG+ +EA+ ++  M 
Sbjct: 357 DVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME 416

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            DGV PN +T + +L ACNH+G+V E    F  M     I P Q+HYAC+ID+LGRAG  
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADH-KINPQQQHYACIIDLLGRAGHL 475

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            +A E++  MP Q   +VWGALL A + +++VE+G++AA+ LF+I+P  +  +V LSN+Y
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLY 535

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A+A +WD VA+VR  MK+  L K+ G SW+EV+ ++  F VGD+SH R +EI  +++ + 
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIE 595

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             L + G+V   +  LHD+ + E E+ L  HSE++ +A+GLI+TP G T+R+ KNLR CV
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACV 655

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +CH + + ISK+V REI+VRD NRFHHF++G CSCG YW
Sbjct: 656 NCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 237/479 (49%), Gaps = 6/479 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  ++  G     F+   L+   +  G+   +R++FD +P   V  WN++   Y   +
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             ++A+  + +M L+ + P+ F+   ++ AC G     +GR +H    +LG+++D+F  N
Sbjct: 99  HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            L+ +YAK   L  A  VF+ +  P+  IVSW A+++    +     AL++F QM+  ++
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+     S L A   ++  E GR +H S++KM ++++P + + L  MYAKCG +  A++
Sbjct: 219 KPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKI 278

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M   NLI WN +ISG+ +NG   +A  LF  M  + V  D  ++++ + + A   +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGS 338

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   + +     ++ +  D +I ++LID + KCG VE A  +F  +   D+V  ++MI  
Sbjct: 339 LEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVG 398

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y   G   EA+ LY  M+   ++P+      LL AC +     +G      +        
Sbjct: 399 YGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQ 458

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR---GKEALQMF 488
                 ++++  + G +D A      +P   G+  W A++    +H     GK A Q  
Sbjct: 459 QQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQL 517



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 194/366 (53%), Gaps = 16/366 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           +LKAC     L +G  VH  V   GF++D FV N L+ +YAKC     +R +F+ +P  E
Sbjct: 125 LLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPE 184

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R++VSW ++ S Y       EA+  F +M    ++P+  +L S++NA     D   GR I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSI 244

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K+G +++     +L  MYAK G +  A  +F  ++ P+++ WNA+I+G   +   
Sbjct: 245 HASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFA 304

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF +M + ++ P+  + TSA+ ACA +   E  R +   + + + + D  +   L
Sbjct: 305 KDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSAL 364

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DM+AKCGS++ AR +F    +++++ W+ +I G+  +G   EA SL+  M R+GV  + 
Sbjct: 365 IDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPND 424

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-------LIDAYGKCGHVED 351
            T   +L +       G+ ++      + A    D+ +N        +ID  G+ GH++ 
Sbjct: 425 VTFLGLLIAC---NHSGMVREGWWFFNRMA----DHKINPQQQHYACIIDLLGRAGHLDQ 477

Query: 352 AVKIFK 357
           A ++ K
Sbjct: 478 AYEVIK 483


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 293/785 (37%), Positives = 463/785 (58%), Gaps = 55/785 (7%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWNSLFSCYVHCDFLEEAVCFFKEM-- 87
           V+N+L+  YA+CG+   +  LF A P   R  VS+NSL S          A+C F+    
Sbjct: 87  VSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLIS----------ALCLFRRWGH 136

Query: 88  VLSGIRP-------NEFSLSSMINACAGSGDS--LLGRKIHGYSIKLGY---DSDMFSAN 135
            L  +R        + F+L S++ AC+   D    LGR+ H +++K G+     + F  N
Sbjct: 137 ALDALRDMLADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFN 196

Query: 136 ALVDMYAKVGNLEDAVAVF--KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           AL+ MYA++G ++DA  +F        D+V+WN +I+  V     + A+++   M +  +
Sbjct: 197 ALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGV 256

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEAR 252
            P+  T+ SAL AC+ +EL  +GR++H  ++K + + ++  V   LVDMYA    +  AR
Sbjct: 257 RPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHAR 316

Query: 253 MIFHLMPE--KNLIAWNIVISGHLQNGG-DMEAASLFPWMYRE-GVGFDQTTLSTVLKSV 308
            +F ++PE  + L  WN +I G+ Q+GG D EA  LF  M  E G    +TT++ VL + 
Sbjct: 317 RVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPAC 376

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A  +     + VH   VK    S+ ++ N+L+D Y + G +++A  IF      D+V+  
Sbjct: 377 ARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWN 436

Query: 369 SMITAYAQFGLGEEALKLYLEMQ---------------DREIN-----PDSFVCSSLLNA 408
           ++IT     GL  EA +L  EMQ               D  ++     P++    +LL  
Sbjct: 437 TLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPG 496

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           CA L+A  +GK++H + ++    SD   G++LV+MYAKCG +  A   F  +P R +++W
Sbjct: 497 CAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITW 556

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           + +I     HG G EAL +F +M+ +G   PN +T ++ L AC+H+GLV      F+ M+
Sbjct: 557 NVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMK 616

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM-PFQANASVWGALLGAARIYKNVEV 586
           + +G +P    +AC++D+LGRAG+  EA  ++ +M P +   S W  +LGA R+++NV++
Sbjct: 617 RDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKL 676

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G+ AAE LF +EP+++S +VLL NIY++AG+W+N  +VR  M+   + KEPG SWIE+  
Sbjct: 677 GRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDG 736

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEK 706
            ++ F  G+ +H  S +++A +D + + + + GYVP     LHDV+E+EK  +L +HSEK
Sbjct: 737 AIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEK 796

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCS 766
           LA+AFGL+  PPGATIRV KNLR+C DCH + +FIS++V REI++RDV RFHHFR+G+CS
Sbjct: 797 LAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCS 856

Query: 767 CGGYW 771
           CG YW
Sbjct: 857 CGDYW 861



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 270/571 (47%), Gaps = 44/571 (7%)

Query: 1   VLKACTSKKDL--FLGLQVHGIVVFTGF---DSDEFVANSLVVMYAKCGNFIDSRRLF-- 53
           VL AC+   D    LG + H   +  GF     + F  N+L+ MYA+ G   D++RLF  
Sbjct: 158 VLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFS 217

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
                  +V+WN++ S  V     EEAV    +MV  G+RP+  + +S + AC+      
Sbjct: 218 SGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLG 277

Query: 114 LGRKIHGYSIKLGYDSDM----FSANALVDMYAKVGNLEDAVAVFKDI-EH-PDIVSWNA 167
           +GR++H + +K   D D+    F A+ALVDMYA    +  A  VF  + EH   +  WNA
Sbjct: 278 VGREVHAFVLK---DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNA 334

Query: 168 VIAGCVLHEHND-WALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           +I G   H   D  A++LF +M++ +   P+  T    L ACA  E+      +H  ++K
Sbjct: 335 MICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVK 394

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
            ++ S+  V   L+DMYA+ G MDEA  IF ++  +++++WN +I+G +  G   EA  L
Sbjct: 395 RDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQL 454

Query: 286 -----FPWMYREGVGF---------------DQTTLSTVLKSVASFQAIGVCKQVHALSV 325
                 P     G                  +  TL T+L   A   A    K++H  +V
Sbjct: 455 VREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAV 514

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           + A ESD  + ++L+D Y KCG +  A  +F      +++    +I AY   GLG+EAL 
Sbjct: 515 RHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALA 574

Query: 386 LYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNM 443
           L+  M  + E  P+     + L AC++    ++G ++   + + +GF    +    +V++
Sbjct: 575 LFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDV 634

Query: 444 YAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
             + G +D+A    S +   +  + +WS M+G    H   K       ++ E  + P+  
Sbjct: 635 LGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFE--LEPDEA 692

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           +   +LC    A  + E       M ++ G+
Sbjct: 693 SHYVLLCNIYSAAGLWENSTEVRGMMRQRGV 723



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 248/521 (47%), Gaps = 43/521 (8%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDSDMFSANALVDMYAKVGNLEDAVA 152
           + F+L   I + A   DS   R IHG S++  L +      +NAL+  YA+ G+L+ A+A
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 153 VFKDIEHPDI---VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           +F     PD+   VS+N++I+   L      AL   + M +     + FT  S L AC+ 
Sbjct: 107 LFAATP-PDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSH 164

Query: 210 M--ELKELGRQLHCSLIK---MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE--KN 262
           +  +   LGR+ H   +K   ++   +      L+ MYA+ G +D+A+ +F        +
Sbjct: 165 LADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGD 224

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           L+ WN +IS  +Q G   EA  +   M   GV  D  T ++ L + +  + +GV ++VHA
Sbjct: 225 LVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHA 284

Query: 323 LSVK-TAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAYAQF-G 378
             +K     ++ ++ ++L+D Y     V  A ++F         L    +MI  YAQ  G
Sbjct: 285 FVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGG 344

Query: 379 LGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           + EEA++L+  M+ +    P     + +L ACA    +   + VH +++K    S+ F  
Sbjct: 345 MDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQ 404

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ------- 490
           N+L++MYA+ G +D+A   F+ I  R IVSW+ +I G    G   EA Q+  +       
Sbjct: 405 NALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSA 464

Query: 491 -----MLE------DG--VLPNHITLVSVLCACNHAGLVAEAK-HHFESMEKKFGIQPMQ 536
                MLE      DG   +PN+ITL+++L  C  A L A A+         +  ++   
Sbjct: 465 ASGETMLEGDDTSVDGQRCMPNNITLMTLLPGC--AVLAAPARGKEIHGYAVRHALESDL 522

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              + ++D+  + G    A  + D +P + N   W  L+ A
Sbjct: 523 AVGSALVDMYAKCGCLALARAVFDRLP-RRNVITWNVLIMA 562


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/748 (37%), Positives = 428/748 (57%), Gaps = 4/748 (0%)

Query: 28  SDEFVANSLVVMYAKCGNFID-SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           SD   A + +  Y    N I  +R +FD IP+ SVV WN +   Y      ++++  +  
Sbjct: 38  SDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLH 97

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+  G+ P  F+   ++ AC+      LGR IH ++  LG   D++ + AL+ MYAK G+
Sbjct: 98  MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGH 157

Query: 147 LEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           L  A  +F  I H D  IV+WNA+IA    H  +   +    QM+ + + PN  T  S L
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
                      G+ +H   I+     + ++   L+DMYAKC  +  AR IF+ + +KN +
Sbjct: 218 PTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDV 277

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMY-REGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            W+ +I G++ +    +A +L+  M    G+     TL+T+L++ A    +   K++H  
Sbjct: 278 CWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCH 337

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            +K+  + D  + NSLI  Y KCG +++AV    E  A D V+ +++I+   Q G  E+A
Sbjct: 338 MIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKA 397

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L ++ +MQ   I P      +LL AC++L+A + G   H + +  GF +DT   N++++M
Sbjct: 398 LLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDM 457

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y+KCG I  +   F  + +R I+SW+ MI G   HG   EAL +F ++   G+ P+ +TL
Sbjct: 458 YSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTL 517

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           ++VL AC+H+GLV E K+ F SM + F I+P   HY CM+D+L RAG   EA   +  MP
Sbjct: 518 IAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMP 577

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
           F  N  +WGALL A R +KN+E+G+  ++ +  + PE +   VL+SNIY+S G WD+ A 
Sbjct: 578 FVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAY 637

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R   + +  KK PG SW+E+   ++ F  G +SH +S  I  KL E+   + K GY   
Sbjct: 638 IRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRAD 697

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
               LHDVEE EKEQ+L +HSEK+A+AFG++ T P + I V KNLRICVDCH++ +FI+ 
Sbjct: 698 SSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITL 757

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  REI VRD +RFHHF++G C+C  +W
Sbjct: 758 LTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 246/491 (50%), Gaps = 21/491 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
           +LKAC+S + L LG  +H      G   D +V+ +L+ MYAKCG+   ++ LF++I   +
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R +V+WN++ + +       + +    +M  +G+ PN  +L S++     +     G+ I
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H Y I+  +  ++    AL+DMYAK   L  A  +F  +   + V W+A+I G VLH+  
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292

Query: 179 DWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             AL L+  M     +NP   T  + L+ACA +   + G++LHC +IK  +  D  VG  
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MYAKCG MD A      M  K+ ++++ +ISG +QNG   +A  +F  M   G+   
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412

Query: 298 QTTLSTVLKSVASFQAI--GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             T+  +L + +   A+  G C   H  +V   F +D  I N++ID Y KCG +  + +I
Sbjct: 413 LETMIALLPACSHLAALQHGTC--CHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREI 470

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+++  +MI  Y   GL  EAL L+ E+Q   + PD     ++L+AC++    
Sbjct: 471 FDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLV 530

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIP-DRGIVS 467
            +GK        F  MS  F           +V++ A+ G++D+A      +P    +  
Sbjct: 531 TEGK------YWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRI 584

Query: 468 WSAMIGGLAQH 478
           W A++     H
Sbjct: 585 WGALLAACRTH 595


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/715 (36%), Positives = 426/715 (59%), Gaps = 45/715 (6%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS----DMFSANALVDMYAKVGNLED 149
           P  + L+ ++ A   +G     R++        +D+    ++F+ NAL+   A    L D
Sbjct: 39  PPTYLLNHLLTAYGKAGRHARARRV--------FDAMPHPNLFTYNALLSTLAHARLLSD 90

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKAC 207
             A+F  +   DIVS+NAVIAG      +  A++++  +    S + P+  T ++ + A 
Sbjct: 91  MEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAA 150

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK----------------------- 244
           + +  + LG+Q HC ++++   ++  VG  LVDMYAK                       
Sbjct: 151 SALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYN 210

Query: 245 --------CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                   C  ++EAR +F +M +++ I W  +++G  QNG + EA  +F  M  +G+  
Sbjct: 211 TMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAI 270

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           DQ T  ++L +  +  A+   KQ+HA  ++T ++ + ++ ++L+D Y KC  ++ A  +F
Sbjct: 271 DQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVF 330

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +  +  ++++ T++I  Y Q G  EEA++++ EMQ   I+PD +   S++++CANL++ E
Sbjct: 331 RRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLE 390

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G Q H   +  G M      N+LV +Y KCGSI+DA R F E+     VSW+A++ G A
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYA 450

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q GR KE + +F +ML  GV P+ +T + VL AC+ AG V + + +F SM+K  GI P+ 
Sbjct: 451 QFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPID 510

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +HY CMID+  R+GK +EA E +  MP   +A  WG LL A R+  ++E+G+ AAE L  
Sbjct: 511 DHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLE 570

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           I+P+  +++VLL +++A+ G W+ VA++RR M+D ++KKEPG SWI+ K+KV+ F+  D+
Sbjct: 571 IDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQ 630

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  SK IY KL+ ++  + + GY P V + LHDV +++K  ++ HHSEKLA+AFGLI  
Sbjct: 631 SHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFV 690

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           P    IR+ KNLR+CVDCH + +FISKI  R+I+VRD  RFH F +G CSCG +W
Sbjct: 691 PQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 244/496 (49%), Gaps = 65/496 (13%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM--- 87
           ++ N L+  Y K G    +RR+FDA+P  ++ ++N+L S   H   L +    F  M   
Sbjct: 42  YLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQR 101

Query: 88  -------VLSG-----------------------IRPNEFSLSSMINACAGSGDSLLGRK 117
                  V++G                       +RP+  ++S+M+ A +  GD  LG++
Sbjct: 102 DIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQ 161

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG---CVL 174
            H   ++LG+ ++ F  + LVDMYAK+  + DA   F +++  ++V +N +I G   C +
Sbjct: 162 FHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKM 221

Query: 175 HEHN-------------DW---------------ALKLFQQMKSSEINPNMFTYTSALKA 206
            E                W               AL++F++M+   I  + +T+ S L A
Sbjct: 222 VEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTA 281

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C  +   E G+Q+H  +I+     +  VG  LVDMY+KC S+  A  +F  M  KN+I+W
Sbjct: 282 CGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISW 341

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I G+ QNG   EA  +F  M R+G+  D  TL +V+ S A+  ++    Q H L++ 
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALV 401

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           +       + N+L+  YGKCG +EDA ++F E S  D V+ T++++ YAQFG  +E + L
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDL 461

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYA 445
           + +M  + + PD      +L+AC+     E+G+   H      G +        ++++Y+
Sbjct: 462 FEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYS 521

Query: 446 KCGSIDDADRAFSEIP 461
           + G + +A+    ++P
Sbjct: 522 RSGKLKEAEEFIKQMP 537



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 210/435 (48%), Gaps = 40/435 (9%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           A ++  D  LG Q H  ++  GF ++ FV + LV MYAK     D++R FD +  ++VV 
Sbjct: 149 AASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVM 208

Query: 64  WNSLFSCYVHCDFLE-------------------------------EAVCFFKEMVLSGI 92
           +N++ +  + C  +E                               EA+  F+ M   GI
Sbjct: 209 YNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGI 268

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
             ++++  S++ AC        G++IH Y I+  YD ++F  +ALVDMY+K  +++ A  
Sbjct: 269 AIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAET 328

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF+ +   +I+SW A+I G   +  ++ A+++F +M+   I+P+ +T  S + +CA +  
Sbjct: 329 VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            E G Q HC  +   +     V   LV +Y KCGS+++A  +F  M   + ++W  ++SG
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFE 330
           + Q G   E   LF  M  +GV  D  T   VL   S A F   G     H++       
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR-SYFHSMQKDHGIV 507

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSA-VDLVACTSMITAYAQFG---LGEEALKL 386
             D     +ID Y + G +++A +  K+     D +   ++++A    G   +G+ A + 
Sbjct: 508 PIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAEN 567

Query: 387 YLEMQDREINPDSFV 401
            LE+  +  NP S+V
Sbjct: 568 LLEIDPQ--NPASYV 580



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 146/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G Q+H  ++ T +D + FV ++LV MY+KC +   +  +F  +  ++
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKN 337

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW +L   Y      EEAV  F EM   GI P++++L S+I++CA       G + H 
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHC 397

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  +NALV +Y K G++EDA  +F ++   D VSW A+++G         
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKE 457

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M +  + P+  T+   L AC+     E GR    S+     K   IV +    
Sbjct: 458 TIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSM----QKDHGIVPIDDHY 513

Query: 238 --LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
             ++D+Y++ G + EA      MP   + I W  ++S   +  GDME
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA-CRLRGDME 559


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/690 (40%), Positives = 415/690 (60%), Gaps = 34/690 (4%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH   IK G  +  F+ + L++  A    GNL  A+ +F+ IE P+   WN +I G  
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           L      A+  + +M    + PN +T+   LK+CA +   + G+Q+H  ++K+ ++SDP 
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168

Query: 234 VGVGLVDMYAKCGSM-------------------------------DEARMIFHLMPEKN 262
           V   L++MYA+ G +                               D+AR +F  +P ++
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            ++WN +I+G+ Q+G   EA + F  M R  V  +++T+ TVL + A   ++ +   V +
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
                   S+  +VN+LID Y KCG ++ A  +F+     D+++   MI  Y+     +E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLV 441
           AL L+ +MQ   + P+     S+L ACA L A + GK +H +I  KF  +++T    SL+
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MYAKCG+I+ A + F+ +  + + SW+AMI GLA HG    AL++F QM ++G  P+ I
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T V VL AC+HAGLV   +  F SM + + I P  +HY CMID+LGRAG F EA  L+  
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           M  + + ++WG+LLGA R++ NVE+G+ AA+ LF +EPE    +VLLSNIYA+AG WD+V
Sbjct: 529 MEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDV 588

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV 681
           A++R  + D  +KK PG S IEV   V+ F VGD+ H +S++IY  LDE+  LL KAG+V
Sbjct: 589 ARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHV 648

Query: 682 PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           P     L+D++E  KE  L HHSEKLA+AFGLI+T P  TIR+ KNLR+C +CH++ + I
Sbjct: 649 PDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLI 708

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           SKI +REII RD NRFHHF++GSCSC  YW
Sbjct: 709 SKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 253/517 (48%), Gaps = 43/517 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           +L  C S ++L    Q+H  ++ TG  + +F  + L+   A    GN   +  LF++I +
Sbjct: 38  LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +   WN++            A+ F+  M+L G+ PN ++   ++ +CA  G +  G++I
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGN-------------------------------L 147
           HG+ +KLG +SD F   +L++MYA+ G                                L
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           +DA  +F++I   D VSWNA+IAG       + AL  FQ+MK + + PN  T  + L AC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           A     ELG  +   +    + S+  +   L+DMY+KCG +D+AR +F  + EK++I+WN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA-LSVK 326
           ++I G+       EA +LF  M +  V  +  T  ++L + A   A+ + K +HA +  K
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
               ++  +  SLID Y KCG++E A ++F       L +  +MI+  A  G    AL+L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYA 445
           + +M+D    PD      +L+AC++    E G+Q    +++   +S        ++++  
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 446 KCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHG 479
           + G  D+A+     +   PD  I  W +++G    HG
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAI--WGSLLGACRVHG 549



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 237/497 (47%), Gaps = 66/497 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNF-------------- 46
           +LK+C        G Q+HG V+  G +SD FV  SL+ MYA+ G                
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197

Query: 47  -----------------IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                             D+RRLF+ IP R  VSWN++ + Y      EEA+ FF+EM  
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR 257

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + + PNE ++ ++++ACA SG   LG  +  +    G  S++   NAL+DMY+K G+L+ 
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ I   DI+SWN +I G         AL LF++M+ S + PN  T+ S L ACA 
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAY 377

Query: 210 MELKELGRQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           +   +LG+ +H  + K  +  ++  +   L+DMYAKCG+++ A+ +F  M  K+L +WN 
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG   +G    A  LF  M  EG   D  T   VL + +    + + +Q  +  V   
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV--- 494

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
              +DY ++  +  YG                         MI    + GL +EA  L  
Sbjct: 495 ---EDYDISPKLQHYG------------------------CMIDLLGRAGLFDEAEAL-- 525

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M++ E+ PD  +  SLL AC      E G+    H+ +     +  A   L N+YA  G
Sbjct: 526 -MKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELE-PENPGAYVLLSNIYATAG 583

Query: 449 SIDDADRAFSEIPDRGI 465
             DD  R  +++ D+G+
Sbjct: 584 RWDDVARIRTKLNDKGM 600



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 17/195 (8%)

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA--KCGSIDDADRAFSEIP 461
           +LL+ C    +++  KQ+H  IIK G  +  FA + L+   A    G++  A   F  I 
Sbjct: 37  TLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
                 W+ MI G +       A+  + +ML  GV PN  T   +L +C   G   E K 
Sbjct: 94  QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK- 152

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV-------DTMPFQA---NASVW 571
                  K G++     +  +I++  + G+   A ELV       D + F A     ++ 
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYA-ELVFSKSSLRDAVSFTALITGYTLR 211

Query: 572 GALLGAARIYKNVEV 586
           G L  A R+++ + V
Sbjct: 212 GCLDDARRLFEEIPV 226


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 290/777 (37%), Positives = 448/777 (57%), Gaps = 37/777 (4%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           V N+L+  YA+CG+   +  LF A     R  VS+NSL S        E A+   ++M+ 
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161

Query: 90  SGIRP-NEFSLSSMINACA---GSGDSLLGRKIHGYSIKLGY---DSDMFSANALVDMYA 142
            G    + F+L S++ AC+   G     LGR+ H +++K G+     + F  NAL+ MYA
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYA 221

Query: 143 KVGNLEDAVAVFKDIEHP------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++G ++DA ++F+           D+V+WN +I+  V       A+++   M S  + P+
Sbjct: 222 RLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPD 281

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
             T+ SAL AC+ +E+  LGR++H  ++K  ++ ++  V   LVDMYA    +  AR +F
Sbjct: 282 GVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVF 341

Query: 256 HLMPE--KNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQ 312
            ++PE  + L  WN +I G+ Q G D EA  LF  M  E G    +TT+S VL + A  +
Sbjct: 342 DMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE 401

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
                + +H   VK     + ++ N+L+D Y + G ++ A +IF      D+V+  ++IT
Sbjct: 402 GFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLIT 461

Query: 373 AYAQFGLGEEALKLYLEMQ----------------DREINPDSFVCSSLLNACANLSAYE 416
                G   EA +L  EMQ                     P++    +LL  CA L+A  
Sbjct: 462 GCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPA 521

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +GK++H + ++    SD   G++LV+MYAKCG +  +   F  +P R +++W+ +I    
Sbjct: 522 RGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYG 581

Query: 477 QHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
            HG G EA+ +F +M   G   PN +T ++ L AC+H+GLV      F  ME+  G++P 
Sbjct: 582 MHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPT 641

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTM-PFQANASVWGALLGAARIYKNVEVGQHAAEML 594
            + +AC++D+LGRAG+  EA  ++ +M P +   S W +LLGA R+++NVE+G+ AAE L
Sbjct: 642 PDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERL 701

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F +EP ++S +VLL NIY++AGMWD    VR  M+   + KEPG SWIE+   ++ F  G
Sbjct: 702 FELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAG 761

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           + SH  S E++A +D + + + + GY P     LHDV+E EK  +L +HSEKLA+AFGL+
Sbjct: 762 ESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLL 821

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             PPGA IRV KNLR+C DCH + +F+SK+V R+I++RDV RFHHFR+GSCSCG YW
Sbjct: 822 RAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 211/431 (48%), Gaps = 31/431 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           L AC+  + L LG ++H +V+      ++ FVA++LV MYA       +RR+FD +PE  
Sbjct: 289 LPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPS 348

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           R +  WN++   Y      EEA+  F  M   +G  P+E ++S ++ ACA S        
Sbjct: 349 RQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEA 408

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HGY +K G   + F  NAL+DMYA++G ++ A  +F  I+  D+VSWN +I GCV+  H
Sbjct: 409 MHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGH 468

Query: 178 NDWALKLFQQMK----------------SSEINPNMFTYTSALKACAGMELKELGRQLHC 221
              A +L  +M+                +    PN  T  + L  CA +     G+++H 
Sbjct: 469 AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHG 528

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             ++  ++SD  VG  LVDMYAKCG +  +R +F  +P +N+I WN++I  +  +G   E
Sbjct: 529 YAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDE 588

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVN 337
           A +LF  M   G         T + ++A+    G+  +     H +      +    +  
Sbjct: 589 AVALFDEMAAGGEATPNEV--TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHA 646

Query: 338 SLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITA---YAQFGLGEEALKLYLEMQD 392
            ++D  G+ G +++A  I    E     + A +S++ A   +    LGE A +   E++ 
Sbjct: 647 CVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEP 706

Query: 393 REINPDSFVCS 403
            E +    +C+
Sbjct: 707 GEASHYVLLCN 717



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 240/502 (47%), Gaps = 39/502 (7%)

Query: 13  LGLQVHGIVVFTGF---DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER------SVVS 63
           LG + H   +  GF     + F  N+L+ MYA+ G   D++ LF             VV+
Sbjct: 190 LGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVT 249

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           WN++ S  V      EAV    +MV  G+RP+  + +S + AC+      LGR++H   +
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309

Query: 124 KLGYDSDM----FSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSWNAVIAGCVLHEH 177
           K   D+D+    F A+ALVDMYA    +  A  VF  +  P   +  WNA+I G      
Sbjct: 310 K---DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGM 366

Query: 178 NDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           ++ AL+LF +M++ +   P+  T +  L ACA  E       +H  ++K  +  +  V  
Sbjct: 367 DEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQN 426

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY------ 290
            L+DMYA+ G MD AR IF ++  +++++WN +I+G +  G   EA  L   M       
Sbjct: 427 ALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSP 486

Query: 291 ------REGVGF----DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
                  EG       +  TL T+L   A+  A    K++H  +V+ A ESD  + ++L+
Sbjct: 487 SSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALV 546

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDS 399
           D Y KCG +  +  +F      +++    +I AY   GLG+EA+ L+ EM    E  P+ 
Sbjct: 547 DMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNE 606

Query: 400 FVCSSLLNACANLSAYEQGKQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
               + L AC++    ++G ++ H      G          +V++  + G +D+A    +
Sbjct: 607 VTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIIT 666

Query: 459 --EIPDRGIVSWSAMIGGLAQH 478
             E  ++ + +WS+++G    H
Sbjct: 667 SMEPGEQQVSAWSSLLGACRLH 688



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 147/291 (50%), Gaps = 22/291 (7%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC ++ + F G + +HG VV  G   + FV N+L+ MYA+ G    +RR+F  I  R
Sbjct: 393 VLPAC-ARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPR 451

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR----------------PNEFSLSSMI 103
            VVSWN+L +  V      EA     EM L                    PN  +L +++
Sbjct: 452 DVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLL 511

Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
             CA       G++IHGY+++   +SD+   +ALVDMYAK G L  + AVF  +   +++
Sbjct: 512 PGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVI 571

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQL-HC 221
           +WN +I    +H   D A+ LF +M +  E  PN  T+ +AL AC+   L + G +L H 
Sbjct: 572 TWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHG 631

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVI 270
                 +K  P +   +VD+  + G +DEA  I   M   E+ + AW+ ++
Sbjct: 632 MERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 180/384 (46%), Gaps = 26/384 (6%)

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEI--KSDPIVGVGLVDMYAKCGSMDEARMIF 255
           F    A+K+ A +      R LH + ++  +  +  P VG  L+  YA+CG +D A  +F
Sbjct: 64  FALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALF 123

Query: 256 HLMPE--KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASF- 311
                  ++ +++N +IS          A      M  EG       TL +VL + +   
Sbjct: 124 AATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLP 183

Query: 312 --QAIGVCKQVHALSVKTAF---ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV---- 362
                 + ++ HA ++K  F     + +  N+L+  Y + G V+DA  +F+ ++A     
Sbjct: 184 GDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPG 243

Query: 363 --DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V   +MI+   Q G   EA+++  +M    + PD    +S L AC+ L     G++
Sbjct: 244 GGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGRE 303

Query: 421 VHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQ 477
           +H  ++K     +++F  ++LV+MYA    +  A R F  +P+  R +  W+AMI G AQ
Sbjct: 304 MHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQ 363

Query: 478 HGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVA--EAKHHFESMEKKFGIQP 534
            G  +EAL++F +M  E G  P+  T+  VL AC  +   A  EA H +       G + 
Sbjct: 364 AGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRF 423

Query: 535 MQEHYACMIDILGRAGKFQEAMEL 558
           +Q     ++D+  R G+   A  +
Sbjct: 424 VQN---ALMDMYARLGEMDVARRI 444



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +      G ++HG  V    +SD  V ++LV MYAKCG    SR +FD +P R+
Sbjct: 510 LLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRN 569

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI- 118
           V++WN L   Y      +EAV  F EM   G   PNE +  + + AC+ SG  L+ R + 
Sbjct: 570 VITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSG--LVDRGLE 627

Query: 119 --HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVL 174
             HG     G          +VD+  + G L++A ++   +E     + +W++++  C L
Sbjct: 628 LFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRL 687

Query: 175 HEH 177
           H +
Sbjct: 688 HRN 690


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 292/797 (36%), Positives = 457/797 (57%), Gaps = 28/797 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD--AIPE 58
           +LK   S  ++ L  Q+HG  + TGF  D  +  + + MY++CG   D++R+FD  ++  
Sbjct: 127 LLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLA 186

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRK 117
             ++ WNS+ + Y+      E +  F +MV  G+  P E + +S++NAC  SG+   G  
Sbjct: 187 LDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAM 246

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HG  IK G ++     N+LV  Y K GNL+ A  +F+ I   D+VSWNA+IA       
Sbjct: 247 VHGRIIKAGLEATNL-WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGE 305

Query: 178 NDWALKLFQQMKSSE--INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            + AL LF++M   E  + PN  T+ S L A +G+     GR++H  + ++ ++ D  + 
Sbjct: 306 GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSIT 365

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+  Y+KC  + +AR IF  +  +++I+WN +++G+ QN        +F  M   G+ 
Sbjct: 366 NSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIE 425

Query: 296 FDQTTLSTVLKSVASFQAIGVC-----KQVHALSVK--TAFESDDYIVNSLIDAYGKCGH 348
            D  +L T++ + AS  + G+      K++H   ++  T       + N+++  Y K   
Sbjct: 426 PDSHSL-TIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNR 484

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           + DA KIFK     D  +  +M+  Y++    E+ L ++L++  +    D    S LL +
Sbjct: 485 IADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTS 544

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDT-------FAGNSLVNMYAKCGSIDDADRAFSEIP 461
           C  L + + GKQ H  + K     D           N+L++MY+KCGSI DA + F ++ 
Sbjct: 545 CGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME 604

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
            + + SW+AMI G A HG   EALQ+F +M  DG+ PN +T +++L AC H GLV E  +
Sbjct: 605 RKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSY 664

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT-----MPFQANA-SVWGALL 575
           +F+SM   +G+ P  EHYACMID+ GR+G+F  A  LV+       P+  +  ++W  LL
Sbjct: 665 YFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLL 724

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
           GA    K +++G  AA  +  +EPE  +T++LL+N+YAS+G+W++  KVR+ M+D  L+K
Sbjct: 725 GACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRK 784

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G SWI+  ++ + F  GD  H + KEIY KL +++    + GYVPM E  LHDV+E+E
Sbjct: 785 EVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETE 844

Query: 696 KEQLLYHHSEKLAVAFGLIATPPG-ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           KE +L  HSEKLAV+FGL+    G   IRV KNLR+C DCH+  +F S +  REI++RD 
Sbjct: 845 KEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDS 904

Query: 755 NRFHHFRNGSCSCGGYW 771
            RFH FR+GSCSCG YW
Sbjct: 905 QRFHLFRDGSCSCGDYW 921



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 281/545 (51%), Gaps = 21/545 (3%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           +++LFD  P R V+SW++L + Y  C    +A   F++M+  G++PN FSL+S++     
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWN 166
           +G+  L R++HG+SI+ G+  D     A + MY++ G LEDA  VF +      DI+ WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 167 AVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           ++IA  + H      L+LF +M S   + P   TY S + AC     ++ G  +H  +IK
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
             +++  +    LV  Y KCG++  A  +F  +  K++++WN +I+ + Q G    A  L
Sbjct: 254 AGLEATNLWN-SLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312

Query: 286 FPWMYR--EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
           F  M +    V  ++ T  ++L +V+   A+   +++HA   + + E D  I NSLI  Y
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFY 372

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            KC  V  A +IF+     D+++  SM+  Y Q         ++  M    I PDS   +
Sbjct: 373 SKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLT 432

Query: 404 SLLNACANLSA----YEQGKQVHVHIIKF---GFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            + NA +  S+    + +GK++H +I++    G +S + + N+++ MYAK   I DA++ 
Sbjct: 433 IIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVS-NAILKMYAKFNRIADAEKI 491

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  + +R   SW+AM+ G +++ + ++ L +F  +L+ G   +H++L  +L +C     +
Sbjct: 492 FKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSL 551

Query: 517 AEAKHHFESMEKKFGIQ--PMQEHYA----CMIDILGRAGKFQEAMELVDTMPFQANASV 570
              K     + K F  Q  P Q+        +I +  + G  ++A ++   M  + +   
Sbjct: 552 QLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFS 610

Query: 571 WGALL 575
           W A++
Sbjct: 611 WTAMI 615



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 198/382 (51%), Gaps = 16/382 (4%)

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            L+ A  +F +  + D++SW+A+IA      +   A  LFQ+M    + PN F+  S LK
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 206 -ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            +C+  E+  L RQLH   I+     D  +    + MY++CG +++A+ +F    E +L+
Sbjct: 130 VSCSTGEIG-LCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVF---DETSLL 185

Query: 265 A-----WNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCK 318
           A     WN +I+ ++ +G  +E   LF  M   G V   + T ++V+ +  S        
Sbjct: 186 ALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGA 245

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            VH   +K   E+ + + NSL+  YGKCG+++ A ++F+  S  D+V+  +MI A  Q G
Sbjct: 246 MVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRG 304

Query: 379 LGEEALKLYLEMQDRE--INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GE AL L+  M   E  + P+     SLL+A + LSA   G+++H HI +     DT  
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            NSL+  Y+KC  +  A   F  +  R I+SW++M+ G  Q+ +      +F +M+  G+
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGI 424

Query: 497 LPNHITLVSVLCACNH--AGLV 516
            P+  +L  +  A +   +GL+
Sbjct: 425 EPDSHSLTIIFNAASRDSSGLI 446


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/779 (36%), Positives = 444/779 (56%), Gaps = 8/779 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    ++ +GL VHG+VV T    D FV+N+LV  Y   G+  D+ R+F  +PER+
Sbjct: 190 VVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERN 249

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSLLGR 116
           +VSWNS+   +      EE      +M+         P+  +L++++  CA   +  +G+
Sbjct: 250 LVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGK 309

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HG ++KL  D ++   NAL+DMY+K G + DA  +FK   + ++VSWN ++ G     
Sbjct: 310 GVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAG 369

Query: 177 HNDWALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
                  L +QM +   ++  +  T  +A+  C    +    ++LHC  +K E + ++ +
Sbjct: 370 DIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNEL 429

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V    V  YAKCGS+  A  +F  +  K + +WN +I G+ Q+     +   +  M   G
Sbjct: 430 VANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSG 489

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  D  T+ ++L + +  +++ + K+VH L ++   E D ++  SL+  Y  CG +  A 
Sbjct: 490 LLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAH 549

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +F       LV+  +M+  Y Q G  E AL L+ +M    + P      S+  AC+ L 
Sbjct: 550 VLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLP 609

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           +   G++ H + +K     + F   S+++MYAK GS+ ++ + F+ + +R + SW+AM+ 
Sbjct: 610 SLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVM 669

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G   HGR KEA+++F +M   G  P+ +T + VL ACNH+GLV E   + + M+  FG+ 
Sbjct: 670 GYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMN 729

Query: 534 PMQEHYACMIDILGRAGKFQEAMEL-VDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           P  +HYAC+ID+L RAGK  EA+++  + M  +    +W  LL + RI+KN+E+G+  A 
Sbjct: 730 PTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAA 789

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            LF  EPEK   +VLLSN+YA +G WD V KVR+ MK+  L+K+ G SWIE+  KV++F 
Sbjct: 790 KLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFV 849

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            G+ S    +EI +    +   + K GY P   +  HD+ E EK + L  HSEKLA+ +G
Sbjct: 850 AGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYG 909

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI T  G T+RV KNLRICVDCH + + ISK++ REI+VRD  RFHHF+NG CSCG YW
Sbjct: 910 LIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 309/586 (52%), Gaps = 19/586 (3%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +A   +KD+ LG ++H +V  +    +D+ +   ++ MY+ CG+  DSR +FDA+ ++++
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             WN++ S Y   +     +  F +M+  SG+ P+ F+   ++ ACAG  +  +G  +HG
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K     D+F +NALV  Y   G++ DA+ VFK +   ++VSWN++I     +  ++ 
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 181 ALKLFQQM--KSSEI--NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
              L  QM  K  EI   P++ T  + L  CA      +G+ +H   +K+ +  + +V  
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNN 328

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG--V 294
            L+DMY+KCG +++A++IF L   KN+++WN ++ G    G   +   L   M   G  +
Sbjct: 329 ALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDL 388

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF-ESDDYIVNSLIDAYGKCGHVEDAV 353
             D+ T+   +        +   K++H  S+K  F  +++ + N+ + +Y KCG +  A 
Sbjct: 389 RADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAH 448

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F    +  + +  ++I  Y+Q      +L  Y +M+   + PD F   SLL+AC+ + 
Sbjct: 449 RVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIK 508

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           + + GK+VH  II+     D+F   SL+++Y  CG +  A   F  + D+ +VSW+ M+ 
Sbjct: 509 SLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVN 568

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G  Q+G  + AL +F QM+  GV P  I+++SV  AC+   L+   +   E+    + ++
Sbjct: 569 GYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS---LLPSLRLGREA--HGYALK 623

Query: 534 PMQEHYA----CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            + E  A     +ID+  + G   E+ ++ + +  ++ AS W A++
Sbjct: 624 CLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVAS-WNAMV 668


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 293/825 (35%), Positives = 455/825 (55%), Gaps = 77/825 (9%)

Query: 13  LGLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           LG  +    VF G      VA N++V  Y + G+   +RRLFDA+P R V SWNS+ + Y
Sbjct: 108 LGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGY 167

Query: 72  VHCDFLEEAVCFFKEMVL-------------------------------SGIRPNEFSLS 100
            H   + +A   FK+M                                  G  P++ + +
Sbjct: 168 CHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFA 227

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK-VGNLEDAVAVFKDIEH 159
           S+++A  G  D  +   +    +K G++SD+    +++++Y +    L+ A+  F  +  
Sbjct: 228 SVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVE 287

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            +  +W+ +IA        D A+ ++ +     I P+     + L  C        GR  
Sbjct: 288 RNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC--------GRIT 338

Query: 220 HCSLIKMEIKSDPIV--GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
              ++  +I  DPIV     ++  Y + G +DEA+ +F  MP +N I+W  +I+G+ QNG
Sbjct: 339 EARILFEQIP-DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNG 397

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA  L   ++R G+    ++L++   + +   A+   +QVH+L+VK   + + Y+ N
Sbjct: 398 RSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCN 457

Query: 338 SLIDAYGKCGH-------------------------------VEDAVKIFKESSAVDLVA 366
           +LI  YGKC +                               +EDA  IF    + D+V+
Sbjct: 458 ALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVS 517

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T++I+AYAQ   G+EA++ +  M      P+S + + LL+ C  L + + G+Q+H   I
Sbjct: 518 WTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAI 577

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G  S+    N+L++MY KCG  D + + F  + +R I +W+  I G AQHG G+EA++
Sbjct: 578 KHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIK 636

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           M+  M   GVLPN +T V +L AC+HAGLV E    F+SM + +G+ P+ EHYACM+D+L
Sbjct: 637 MYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLL 696

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GR G  Q A + +  MP + +  +W ALLGA +I+KN E+G+ AAE LF  EP  +  +V
Sbjct: 697 GRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYV 756

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           +LSNIY+S GMW  VA++R+ MK   + KEPG SW+++++KV++F  GD+ H + +EI  
Sbjct: 757 MLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDY 816

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
            L ++  LL   GYVP  E  LHD++E +KE  L +HSEKLAVA+GL+ TP G  I++ K
Sbjct: 817 TLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMK 876

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLRIC DCHT  +F+S +  R+I +RD NRFHHFRNGSCSCG +W
Sbjct: 877 NLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 233/535 (43%), Gaps = 75/535 (14%)

Query: 41  AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP------ 94
           A+ G   ++R +FDA+P R +++WNS+ S Y +   LE+A   F  +    +R       
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLS 103

Query: 95  ---------------------NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                                N  + ++M++    +GD  + R++           D+ S
Sbjct: 104 GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRL----FDAMPSRDVTS 159

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            N++V  Y     + DA  +FK +   ++V+W  +I+G V  E +     +F+ M     
Sbjct: 160 WNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGA 219

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS-MDEAR 252
           +P+   + S L A  G++   +   L   ++K   +SD ++G  ++++Y +  S +D A 
Sbjct: 220 SPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAI 279

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
             F  M E+N   W+ +I+  L +GG ++AA            + +  + ++    A   
Sbjct: 280 KFFDGMVERNEYTWSTMIAA-LSHGGRIDAAIAV---------YGRDPVKSIPSQTALLT 329

Query: 313 AIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
            +  C ++    +      D  +V  N++I  Y + G V++A ++F      + ++   M
Sbjct: 330 GLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGM 389

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  YAQ G  EEAL L   +    + P     +S   AC+++ A E G+QVH   +K G 
Sbjct: 390 IAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGC 449

Query: 431 MSDTFAGNSLVNMYAKCGS-------------------------------IDDADRAFSE 459
             +++  N+L++MY KC +                               ++DA   F  
Sbjct: 450 QFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDN 509

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           +  R +VSW+ +I   AQ  RG EA++ F  ML +   PN   L  +L  C   G
Sbjct: 510 MLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLG 564



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 243/520 (46%), Gaps = 59/520 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAIPER 59
           VL A T  +DL +   +  +V+ TGF+SD  +  S++ +Y +  + +D + + FD + ER
Sbjct: 229 VLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVER 288

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS-LLGRKI 118
           +  +W+++ +   H   ++ A+  +    +  I P++ +L + +  C    ++ +L  +I
Sbjct: 289 NEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARCGRITEARILFEQI 347

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
                    D  + S NA++  Y + G +++A  +F  +   + +SW  +IAG   +  +
Sbjct: 348 P--------DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRS 399

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + AL L Q +  + + P++ + TS+  AC+ +   E GRQ+H   +K   + +  V   L
Sbjct: 400 EEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNAL 459

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG--------------------- 277
           + MY KC +M+  R +F+ M  K+ ++WN  I+  +QN                      
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWT 519

Query: 278 -----------GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
                      GD EA   F  M  E    +   L+ +L       +  + +Q+H +++K
Sbjct: 520 TIISAYAQAERGD-EAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIK 578

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              +S+  + N+L+  Y KCG   D+ K+F      D+    + IT  AQ GLG EA+K+
Sbjct: 579 HGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKM 637

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA- 445
           Y  M+   + P+      LLNAC++    ++G Q       F  MS  +    L+  YA 
Sbjct: 638 YEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQF------FKSMSRDYGLTPLLEHYAC 691

Query: 446 ------KCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                 + G +  A++   ++P +   V WSA++G    H
Sbjct: 692 MVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIH 731



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D  A ++ +   A+ G + +A   F  +P R I++W++MI      G  ++A  +F    
Sbjct: 32  DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF---- 87

Query: 493 EDGVLPNHITLVSVLCA-CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
            D +   ++   ++L +     G V +A+  F+ M ++  +      +  M+    + G 
Sbjct: 88  -DAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVA-----WNAMVSCYVQNGD 141

Query: 552 FQEAMELVDTMPFQANASVWGALL 575
              A  L D MP + + + W +++
Sbjct: 142 ITMARRLFDAMPSR-DVTSWNSMV 164


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/754 (36%), Positives = 441/754 (58%), Gaps = 9/754 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H +++  G   +  ++  L+ +Y   G+   SR  FD I ++++ SWNS+ S YV   
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 76  FLEEAV-CFFKEMVLSG---IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
              EA+ C  +   + G   +RP+ ++   ++ AC    D   G+K+H    K+G++ D+
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDV 156

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F A +LV +Y++ G L+ A  VF D+   D+ SWNA+I+G   + +   AL +  +MK  
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            +  +  T  S L  CA  +    G  +H  ++K  + SD  V   L++MY+K G + +A
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           +M+F  M  ++L++WN +I+ + QN     A   F  M   G+  D  T+ ++    +  
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336

Query: 312 QAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
               + + +    ++  +   D ++ N+L++ Y K G++  A  +F +    D ++  ++
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396

Query: 371 ITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +T Y Q GL  EA+  Y  M++ R+  P+     S++ A +++ A +QG ++H  +IK  
Sbjct: 397 VTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNS 456

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D F    L+++Y KCG ++DA   F EIP    V W+A+I  L  HGRG+EALQ+F 
Sbjct: 457 LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFK 516

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            ML + V  +HIT VS+L AC+H+GLV E +  F+ M+K++GI+P  +HY CM+D+LGRA
Sbjct: 517 DMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G  ++A ELV  MP Q +AS+WGALL A +IY N E+G  A++ L  ++ E    +VLLS
Sbjct: 577 GYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLS 636

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA+   W+ V KVR   +D  L+K PG S + V  K   F  G+++H +  EIY +L 
Sbjct: 637 NIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELK 696

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            +S  +   GYVP       D+EE EKEQ+L  HSE+LA+AFG+I+TPP + IR+ KNLR
Sbjct: 697 VLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLR 756

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNG 763
           +C DCH + ++IS+I  REI+VRD NRFHHF++G
Sbjct: 757 VCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 261/498 (52%), Gaps = 9/498 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC S  D   G +VH  V   GF+ D FVA SLV +Y++ G    + ++F  +P + 
Sbjct: 130 ILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SWN++ S +        A+     M   G++ +  +++S++  CA S D + G  IH 
Sbjct: 187 VGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHL 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G DSD+F +NAL++MY+K G L+DA  VF  +E  D+VSWN++IA    +     
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPST 306

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           AL+ F+ M+   I P++ T  S     + +  + + R +   +I+ E +  D ++G  LV
Sbjct: 307 ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY--REGVGFD 297
           +MYAK G M+ A  +F  +P K+ I+WN +++G+ QNG   EA   +  M   R+ +  +
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP-N 425

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q T  +++ + +   A+    ++HA  +K +   D ++   LID YGKCG +EDA+ +F 
Sbjct: 426 QGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFY 485

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E      V   ++I +    G GEEAL+L+ +M    +  D     SLL+AC++    ++
Sbjct: 486 EIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDE 545

Query: 418 GKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGL 475
           G++   +   ++G          +V++  + G ++ A      +P +   S W A++   
Sbjct: 546 GQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSAC 605

Query: 476 AQHGRGKEALQMFGQMLE 493
             +G  +       ++LE
Sbjct: 606 KIYGNAELGTLASDRLLE 623



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 148/294 (50%), Gaps = 7/294 (2%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           ++LH  L+      + ++   L+++Y   G +  +R  F  + +KN+ +WN +IS +++ 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 277 GGDMEAASLFPWMYREGVG----FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           G   EA +    ++    G     D  T   +LK+  S       K+VH    K  FE D
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  SL+  Y + G ++ A K+F +    D+ +  +MI+ + Q G    AL +   M+ 
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +  D+   +S+L  CA       G  +H+H++K G  SD F  N+L+NMY+K G + D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           A   F ++  R +VSW+++I    Q+     AL+ F  M   G+ P+ +T+VS+
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 21/299 (7%)

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   K++HAL +      +  +   LI+ Y   G +  +   F      ++ +  S+I+A
Sbjct: 35  VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISA 94

Query: 374 YAQFGLGEEAL----KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           Y +FG   EA+    +L+       + PD +    +L AC +L     GK+VH  + K G
Sbjct: 95  YVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMG 151

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F  D F   SLV++Y++ G +D A + F ++P + + SW+AMI G  Q+G    AL +  
Sbjct: 152 FEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211

Query: 490 QMLEDGVLPNHITLVSVLCACNHA-GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           +M  +GV  + IT+ S+L  C  +  ++     H   +  K G+         +I++  +
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL--KHGLDSDVFVSNALINMYSK 269

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLG----------AARIYKNVEVGQHAAEMLFAI 597
            G+ Q+A  + D M  +   S W +++           A R +K +++G    ++L  +
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVS-WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVV 327



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           ++L N+C N++A    K++H  ++ FG   +      L+N+Y   G I  +   F  I  
Sbjct: 26  NALFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK 82

Query: 463 RGIVSWSAMIGGLAQHGRGKEAL----QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           + I SW+++I    + G+  EA+    Q+F       + P+  T   +L AC    LV  
Sbjct: 83  KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVDG 140

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            K H      K G +      A ++ +  R G    A ++   MP +   S W A++
Sbjct: 141 KKVHCCVF--KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS-WNAMI 194


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 297/757 (39%), Positives = 448/757 (59%), Gaps = 10/757 (1%)

Query: 24   TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
            +GF  D +V ++LV  +A+ G   D++ +F+ +  R+VVS N L    V     E A   
Sbjct: 784  SGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 843

Query: 84   FKEMV-LSGIRPNEFS--LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVD 139
            F EM  L GI  + +   LS+             GR++H + I+ G  D+ +   N LV+
Sbjct: 844  FHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 903

Query: 140  MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
            MYAK G + DA +VF+ +   D VSWN++I+G   +E ++ A + F +M+ +   P+ FT
Sbjct: 904  MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFT 963

Query: 200  YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
              S L +CA +    LG Q+HC  +K+ + +D  V   L+ +YA+ G   E   +F LMP
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023

Query: 260  EKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            E + ++WN VI     +   + +A   F  M R G G  + T   +L +V+S     V  
Sbjct: 1024 EYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSH 1083

Query: 319  QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQF 377
            Q+HAL +K     D  I N+L+  YGKCG + +  KIF + S   D V+  SMI+ Y   
Sbjct: 1084 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 1143

Query: 378  GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
             L  +A+ L   M  +    DSF  +++L+ACA+++  E+G +VH   I+    SD   G
Sbjct: 1144 ELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVG 1203

Query: 438  NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            ++LV+MY+KCG ID A R F  +P R + SW++MI G A+HG G++AL++F +M+ DG  
Sbjct: 1204 SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 1263

Query: 498  PNHIT-LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+H+  L+ VL AC+H G V E   HF+SM + + + P  EH++CM+D+LGRAGK  E  
Sbjct: 1264 PDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 1323

Query: 557  ELVDTMPFQANASVWGALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
            + +++MP + N  +W  +LGA      +N E+G+ AAEML  +EP+ +  +VLL+N+YAS
Sbjct: 1324 DFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYAS 1383

Query: 615  AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
               W++VAK R  MK+  +KKE G SW+ +KD V+ F  GD+ H     IY KL E++  
Sbjct: 1384 GEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRK 1443

Query: 675  LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
            +  AGY+P  +  L D+E   KE+LL +HSEK+AVAF ++       IR+ KNLR+C DC
Sbjct: 1444 MRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDC 1502

Query: 735  HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            H++F +ISKIV R+I++RD NRFHHF +G CSCG YW
Sbjct: 1503 HSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 175/600 (29%), Positives = 300/600 (50%), Gaps = 30/600 (5%)

Query: 2    LKAC--TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-GNFIDSRRLFDAIPE 58
            L+AC  +      LG+Q+HG++  T + SD  V N L+ MY  C  +  D+R +FD I  
Sbjct: 652  LRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGI 711

Query: 59   RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI----RPNEFSLSSMINACAGSGDSLL 114
            R+ +SWNS+ S Y        A   F  M   G+    +PNE++  S+I A   S D  L
Sbjct: 712  RNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGL 771

Query: 115  G--RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
                ++     K G+  D++  +ALV  +A+ G  +DA  +F+ +   ++VS N ++ G 
Sbjct: 772  CVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGL 831

Query: 173  VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM----ELKELGRQLHCSLIKMEI 228
            V  +  + A K+F +MK   +  N  +Y   L A +      E +  GR++H  +I+  +
Sbjct: 832  VKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGL 890

Query: 229  KSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
              + + +G GLV+MYAK G++ +A  +F LM EK+ ++WN +ISG  QN    +AA  F 
Sbjct: 891  NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFL 950

Query: 288  WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
             M R G      TL + L S AS   I + +Q+H   +K   ++D  + N+L+  Y + G
Sbjct: 951  RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 1010

Query: 348  HVEDAVKIFKESSAVDLVACTSMITAYAQFGLG-EEALKLYLEMQDREINPDSFVCSSLL 406
               + +K+F      D V+  S+I A +       +A+K +LEM             ++L
Sbjct: 1011 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL 1070

Query: 407  NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGI 465
            +A ++LS +E   Q+H  ++K+    DT  GN+L++ Y KCG +++ ++ F+ + + R  
Sbjct: 1071 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 1130

Query: 466  VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
            VSW++MI G   +    +A+ +   M++ G   +  T  +VL AC     +         
Sbjct: 1131 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG------ 1184

Query: 526  ME-KKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
            ME    GI+   E      + ++D+  + G+   A    + MP + N   W +++ G AR
Sbjct: 1185 MEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYAR 1243



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 268/496 (54%), Gaps = 21/496 (4%)

Query: 98   SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
            +  S+IN   GS  S   R++H  SIK G+  ++F +N L+++Y ++G+L  A  +F ++
Sbjct: 546  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 158  EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKEL 215
             + ++V+W  +I+G   +   D A   F+ M  +   PN + + SAL+AC  +G    +L
Sbjct: 606  SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665

Query: 216  GRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G Q+H  + K    SD +V   L+ MY  C  S ++AR +F  +  +N I+WN +IS + 
Sbjct: 666  GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725

Query: 275  QNGGDMEAASLFPWMYREGVGF----DQTTLSTVLKSVASFQAIGVC--KQVHALSVKTA 328
            + G  + A  LF  M +EG+GF    ++ T  +++ +  S    G+C  +Q+ A   K+ 
Sbjct: 726  RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSG 785

Query: 329  FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            F  D Y+ ++L+  + + G  +DA  IF++    ++V+   ++    +   GE A K++ 
Sbjct: 786  FLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFH 845

Query: 389  EMQDR-EINPDSFVCSSLLNACANLSAYEQ----GKQVHVHIIKFGFMSDTFA-GNSLVN 442
            EM+D   IN DS+V   LL+A +  S  E+    G++VH H+I+ G   +  A GN LVN
Sbjct: 846  EMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 903

Query: 443  MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
            MYAK G+I DA   F  + ++  VSW+++I GL Q+   ++A + F +M   G +P++ T
Sbjct: 904  MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFT 963

Query: 503  LVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
            L+S L +C   G +   +  H + +  K G+         ++ +    G F E +++   
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGL--KLGLDTDVSVSNALLALYAETGCFTECLKVFSL 1021

Query: 562  MPFQANASVWGALLGA 577
            MP + +   W +++GA
Sbjct: 1022 MP-EYDQVSWNSVIGA 1036



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 282/575 (49%), Gaps = 17/575 (2%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            ++H   +  GF  + F++N+L+ +Y + G+   +++LFD +  R++V+W  L S Y    
Sbjct: 565  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 624

Query: 76   FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS--LLGRKIHGYSIKLGYDSDMFS 133
              +EA   F++MV +G  PN ++  S + AC  SG S   LG +IHG   K  Y SD+  
Sbjct: 625  KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVV 684

Query: 134  ANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS- 191
             N L+ MY   + +  DA +VF  I   + +SWN++I+          A  LF  M+   
Sbjct: 685  CNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEG 744

Query: 192  ---EINPNMFTYTSALK-ACAGMELKE-LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
                  PN +T+ S +  AC+ ++    +  Q+   + K     D  VG  LV  +A+ G
Sbjct: 745  LGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFG 804

Query: 247  SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
              D+A+ IF  M  +N+++ N ++ G ++      AA +F  M ++ VG +  +   +L 
Sbjct: 805  LTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLS 863

Query: 307  SVASFQAI----GVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSA 361
            + + F  +       ++VHA  ++T    +   + N L++ Y K G + DA  +F+    
Sbjct: 864  AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE 923

Query: 362  VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             D V+  S+I+   Q    E+A + +L M+     P +F   S L++CA+L     G+Q+
Sbjct: 924  KDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 983

Query: 422  HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA-QHGR 480
            H   +K G  +D    N+L+ +YA+ G   +  + FS +P+   VSW+++IG L+     
Sbjct: 984  HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEAS 1043

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
              +A++ F +M+  G   + +T +++L A +   L  E  H   ++  K+ +        
Sbjct: 1044 VSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGN 1102

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             ++   G+ G+  E  ++   M    +   W +++
Sbjct: 1103 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 1137



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 228/488 (46%), Gaps = 50/488 (10%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
             L +C S   + LG Q+H   +  G D+D  V+N+L+ +YA+ G F +  ++F  +PE  
Sbjct: 967  TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 1026

Query: 61   VVSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSWNS+       +  + +AV +F EM+  G   +  +  ++++A +      +  +IH
Sbjct: 1027 QVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 1086

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHE-- 176
               +K     D    NAL+  Y K G + +   +F  + E  D VSWN++I+G + +E  
Sbjct: 1087 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 1146

Query: 177  HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
            H    L  F   K   ++   FT+ + L ACA +   E G ++H   I+  ++SD +VG 
Sbjct: 1147 HKAMDLVWFMMQKGQRLDS--FTFATVLSACASVATLERGMEVHACGIRACMESDVVVGS 1204

Query: 237  GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
             LVDMY+KCG +D A   F LMP +N+ +WN +ISG+ ++G   +A  LF  M  +G   
Sbjct: 1205 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 1264

Query: 297  DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            D   ++ +L  +++   +G         V+  FE                 H +   +++
Sbjct: 1265 DH--VAPLLGVLSACSHVGF--------VEEGFE-----------------HFKSMSEVY 1297

Query: 357  KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSA 414
            + S  V+  +C  M+    + G  +E       M    + P+  +  ++L AC  AN   
Sbjct: 1298 RLSPRVEHFSC--MVDLLGRAGKLDEVGDFINSM---PMKPNVLIWRTVLGACCRANGRN 1352

Query: 415  YEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VS 467
             E G++    +++   +    A N   L NMYA     +D  +A   + +  +      S
Sbjct: 1353 TELGRRAAEMLLE---LEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCS 1409

Query: 468  WSAMIGGL 475
            W  M  G+
Sbjct: 1410 WVTMKDGV 1417


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/776 (36%), Positives = 451/776 (58%), Gaps = 10/776 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D  +G  V+  ++  GF+SD FV N+LV MY++ G    +R++FD +P R 
Sbjct: 112 VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNSL S Y    + EEA+  + E+  S I P+ F++SS++ A         G+ +HG
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 231

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K G +S +   N LV MY K     DA  VF +++  D VS+N +I G +  E  + 
Sbjct: 232 FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEE 291

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++++F +    +  P++ T +S L+AC  +    L + ++  ++K     +  V   L+D
Sbjct: 292 SVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID 350

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG M  AR +F+ M  K+ ++WN +ISG++Q+G  MEA  LF  M       D  T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              ++        +   K +H+  +K+    D  + N+LID Y KCG V D++KIF    
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   ++I+A  +FG     L++  +M+  E+ PD       L  CA+L+A   GK+
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +++FG+ S+   GN+L+ MY+KCG ++++ R F  +  R +V+W+ MI     +G 
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++AL+ F  M + G++P+ +  ++++ AC+H+GLV E    FE M+  + I PM EHYA
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R+ K  +A E +  MP + +AS+W ++L A R   ++E  +  +  +  + P+
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
                +L SN YA+   WD V+ +R+ +KD  + K PG SWIEV   V+ F+ GD S  +
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQ 770

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES-----EKEQLLYHHSEKLAVAFGLIA 715
           S+ IY  L+ +  L+ K GY+P    D  +V ++     EK +L+  HSE+LA+AFGL+ 
Sbjct: 771 SEAIYKSLEILYSLMAKEGYIP----DPREVSQNLEEEEEKRRLICGHSERLAIAFGLLN 826

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG  ++V KNLR+C DCH   + ISKIV REI+VRD NRFH F++G+CSC   W
Sbjct: 827 TEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 310/615 (50%), Gaps = 11/615 (1%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PERSV 61
           +A +S  +L    ++H +V+  G DS +F +  L+  Y+       S  +F  + P ++V
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
             WNS+   +       EA+ F+ ++  S + P++++  S+I ACAG  D+ +G  ++  
Sbjct: 72  YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            + +G++SD+F  NALVDMY+++G L  A  VF ++   D+VSWN++I+G   H + + A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+++ ++K+S I P+ FT +S L A   + + + G+ LH   +K  + S  +V  GLV M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K     +AR +F  M  ++ +++N +I G+L+     E+  +F     +    D  T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTV 310

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           S+VL++    + + + K ++   +K  F  +  + N LID Y KCG +  A  +F     
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D V+  S+I+ Y Q G   EA+KL+  M   E   D      L++    L+  + GK +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H + IK G   D    N+L++MYAKCG + D+ + FS +     V+W+ +I    + G  
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA-KHHFESMEKKFGIQPMQEHYA 540
              LQ+  QM +  V+P+  T +  L  C  A L A+           +FG +   +   
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMC--ASLAAKRLGKEIHCCLLRFGYESELQIGN 548

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            +I++  + G  + +  + + M  + +   W  ++ A  +Y     G+ A E    +E  
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKS 604

Query: 601 K--SSTHVLLSNIYA 613
                + V ++ IYA
Sbjct: 605 GIVPDSVVFIAIIYA 619


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/568 (44%), Positives = 376/568 (66%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           LK CA  +L   G+  H  ++ M +K+D +    L++MY+KCGS+D AR +F  MP ++L
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I    QNG + EA  L   M REG  F + T+S+VL + A+  A+  C+ +HA 
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           ++K A + + ++  +L+D Y KCG ++DAV +F+      +V  +SM   Y Q  + E+A
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+ +  +  +  D F+ SS++ ACA L+A  +GKQV+  + K GF S+ F  +SL++M
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDM 310

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG I+++ + F ++  R +V W+AMI GL++H R  E + +F +M + G+ PN +T 
Sbjct: 311 YAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTF 370

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           VSVL AC H GLV + + +F+ M K+  + P   HY+CM+D L RAG+  EA +L+  +P
Sbjct: 371 VSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLP 430

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
           F A+AS+WG+LL + R + N+E+ + AA+ LF IEP  S  ++LLSN+YA+ G WD VAK
Sbjct: 431 FNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAK 490

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R+ +K++ +KKE G SWIE+KDKV+ F VG+R+H +  EIY+KL+EV D L K GY   
Sbjct: 491 MRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVE 550

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
            + DLH V ES K++LL HHSEKLA   GL+  PP A IR+ KNLRIC DCH+  +  SK
Sbjct: 551 TQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASK 610

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              R++IVRD NRFHHF+NG CSCG +W
Sbjct: 611 FFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 174/307 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C  +K L  G   H  ++  G  +D   +N L+ MY+KCG+   +R++FD +P RS
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++           EA+    +M   G   +EF++SS++ ACA        + +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK   D ++F A AL+D+YAK G ++DAV VF+ +    +V+W+++ AG V +E  + 
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++   + +  + F  +S + ACAG+     G+Q++  L K    S+  V   L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++E+  +F  + ++N++ WN +ISG  ++   +E   LF  M + G+  +  T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 301 LSTVLKS 307
             +VL +
Sbjct: 370 FVSVLSA 376



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 205/380 (53%), Gaps = 2/380 (0%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++  CA     L G+  H   + +G  +D+ ++N L++MY+K G+++ A  VF ++    
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +VSWN +I     +   + AL L  QM+      + FT +S L ACA        + LH 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK  +  +  V   L+D+YAKCG M +A  +F  MP+++++ W+ + +G++QN    +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
           A +LF   +  G+  DQ  +S+V+ + A   A+   KQV+AL  K+ F S+ ++ +SLID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            Y KCG +E++ K+F++    ++V   +MI+  ++     E + L+ +MQ   ++P+   
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             S+L+AC ++   ++G++    + K   ++ + F  + +V+  ++ G I +A    S++
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 461 PDRGIVS-WSAMIGGLAQHG 479
           P     S W +++     HG
Sbjct: 430 PFNASASMWGSLLASCRTHG 449



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 155/261 (59%), Gaps = 3/261 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +K  L     +H   +    D + FVA +L+ +YAKCG   D+  +F+++P+RS
Sbjct: 171 VLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRS 230

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+S+ + YV  +  E+A+  F++   +G++ ++F +SS+I ACAG    + G++++ 
Sbjct: 231 VVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNA 290

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G+ S++F A++L+DMYAK G +E++  VF+D+E  ++V WNA+I+G   H  +  
Sbjct: 291 LLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLE 350

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV--GVGL 238
            + LF++M+   ++PN  T+ S L AC  M L + G Q +  L+  E    P V     +
Sbjct: 351 VMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKG-QKYFDLMTKEHHLAPNVFHYSCM 409

Query: 239 VDMYAKCGSMDEARMIFHLMP 259
           VD  ++ G + EA  +   +P
Sbjct: 410 VDTLSRAGQIFEAYDLISKLP 430



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 5/285 (1%)

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           +LK  A  + +   K  HA  +    ++D    N LI+ Y KCG V+ A ++F E  +  
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS-FVCSSLLNACANLSAYEQGKQVH 422
           LV+  +MI +  Q G   EAL L L+MQ RE  P S F  SS+L ACA   A  + + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQ-REGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
              IK     + F   +L+++YAKCG + DA   F  +PDR +V+WS+M  G  Q+   +
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           +AL +F +  E G+  +   + SV+CAC     + E K    ++  K G        + +
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGK-QVNALLSKSGFCSNIFVASSL 307

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEV 586
           ID+  + G  +E+ ++   +  + N  +W A++ G +R  +++EV
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEV 351


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/626 (40%), Positives = 385/626 (61%)

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +++ AV++F+ I+ PD  ++N +I G  L +    A+ LF++M  + + P+ FT+   LK
Sbjct: 73  SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
            C+ ++    G Q+H  ++K    S   V   L+ MYA CG ++ AR +F  M E+N+  
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN + +G+ ++G   E   LF  M    + FD+ TL +VL +      + + + ++    
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           +   + +  ++ SL+D Y KCG V+ A ++F +    D+VA ++MI+ Y+Q     EAL 
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L+ EMQ   I+P+     S+L++CA L A E GK VH  I K         G +L++ YA
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYA 372

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCGS++ +   F ++P + ++SW+ +I GLA +G+GK+AL+ F  MLE  V PN +T + 
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+HAGLV E +  F SM + FGI+P  EHY CM+DILGRAG  +EA + +  MP Q
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
            NA +W  LL + +++KNVE+G+ + + L  +EP  S  ++LLSNIYAS G W++  KVR
Sbjct: 493 PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVR 552

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             MK+  +KK PG S IE+   ++ F   D  H++S+EIY  ++++   +  AGYVP   
Sbjct: 553 GEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTA 612

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
               D EE +KE  + HHSEKLA+AFGLI +PPG TIR+ KNLR+C DCH + + +SK+ 
Sbjct: 613 EARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVF 672

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
           +REI+VRD  RFHHF+ GSCSC  YW
Sbjct: 673 NREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 234/467 (50%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C+  + L  G Q+H +++  GF S  FV N+L+ MYA CG    +RR+FD + ER+
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERN 189

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +WNS+F+ Y      EE V  F EM+   IR +E +L S++ AC    D  LG  I+ 
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G   +     +LVDMYAK G ++ A  +F  ++  D+V+W+A+I+G         
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M+ + I+PN  T  S L +CA +   E G+ +H  + K  +K    +G  L+D
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCGS++ +  +F  MP KN+++W ++I G   NG   +A   F  M  + V  +  T
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL + +     G+  +   L V     S D+ +   I+ YG                
Sbjct: 430 FIGVLSACSH---AGLVDEGRDLFVSM---SRDFGIEPRIEHYG---------------- 467

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                    M+    + GL EEA +    +++  I P++ +  +LL +C      E G++
Sbjct: 468 --------CMVDILGRAGLIEEAFQF---IKNMPIQPNAVIWRTLLASCKVHKNVEIGEE 516

Query: 421 VHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
               +I    +  T +G+ ++  N+YA  G  +DA +   E+ ++GI
Sbjct: 517 SLKQLI---ILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGI 560



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 246/497 (49%), Gaps = 14/497 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLV----VMYAKCGNFIDSRRLFDAI 56
           +L+ C + +DL    ++H  ++ T       VA +L+    ++     ++  S  +F  I
Sbjct: 30  ILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVS--IFRQI 84

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
            E    ++N +   +       EA+  FKEM  + ++P+EF+   ++  C+       G 
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   +K G+ S  F  N L+ MYA  G +E A  VF ++   ++ +WN++ AG     
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           + +  +KLF +M   +I  +  T  S L AC  +   ELG  ++  + +  +K +P +  
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMYAKCG +D AR +F  M  ++++AW+ +ISG+ Q     EA  LF  M +  +  
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDP 324

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++ T+ ++L S A   A+   K VH    K   +    +  +L+D Y KCG VE ++++F
Sbjct: 325 NEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVF 384

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +    ++++ T +I   A  G G++AL+ +  M ++ + P+      +L+AC++    +
Sbjct: 385 GKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVD 444

Query: 417 QGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           +G+ + V + + FG          +V++  + G I++A +    +P     V W  ++  
Sbjct: 445 EGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLAS 504

Query: 475 LAQHGR---GKEALQMF 488
              H     G+E+L+  
Sbjct: 505 CKVHKNVEIGEESLKQL 521


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/758 (37%), Positives = 422/758 (55%), Gaps = 5/758 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q H  +V  GF +D  +   L    +  G    +R +F ++    V  +N L   +   +
Sbjct: 38  QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 76  FLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               ++  F  +  S  ++PN  + +  I+A +G  D   G  IHG +I  G DS++   
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEI 193
           + +V MY K   +EDA  VF  +   D + WN +I+G   +E    ++++F+ +   S  
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             +  T    L A A ++   LG Q+H    K    S   V  G + +Y+KCG +  A  
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F      +++A+N +I G+  NG    + SLF  +   G     +TL +++        
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLML 337

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           I     +H  S+K+ F S   +  +L   Y K   +E A K+F ES    L +  +MI+ 
Sbjct: 338 I---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q GL E+A+ L+ EMQ+ E +P+    + +L+ACA L A   GK VH  +    F S 
Sbjct: 395 YTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +   +L+ MYAKCGSI +A R F  +P +  V+W+ MI G   HG G+EAL +F +ML 
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLN 514

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G+ P  +T + VL AC+HAGLV E    F SM  ++G +P  +HYAC++DILGRAG  Q
Sbjct: 515 SGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQ 574

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A++ ++ MP Q   SVW  LLGA RI+K+  + +  +E LF ++P+    HVLLSNI++
Sbjct: 575 RALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           +   +   A VR+  K  KL K PG + IE+ +  + FT GD+SH + K I+ KL+++  
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEG 694

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            + +AGY P  E  LHDVEE E+E ++  HSE+LA+AFGLIAT PG  IR+ KNLR+C+D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CHT+ + ISKI  R I+VRD NRFHHF++G CSCG YW
Sbjct: 755 CHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 235/480 (48%), Gaps = 6/480 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + A +  +D   G  +HG  +  G DS+  + +++V MY K     D+R++FD +PE+  
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + WN++ S Y   +   E++  F++++  S  R +  +L  ++ A A   +  LG +IH 
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + K G  S  +     + +Y+K G ++ A  +F++   PDIV++NA+I G   +   + 
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETEL 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L LF+++  S       T  S +     + L      +H   +K    S   V   L  
Sbjct: 306 SLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTT 362

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+K   ++ AR +F   PEK+L +WN +ISG+ QNG   +A SLF  M       +  T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVT 422

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++ +L + A   A+ + K VH L   T FES  Y+  +LI  Y KCG + +A ++F    
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP 482

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             + V   +MI+ Y   G G+EAL ++ EM +  I P       +L AC++    ++G +
Sbjct: 483 KKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDE 542

Query: 421 VHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +   +I ++GF         +V++  + G +  A +    +P   G   W  ++G    H
Sbjct: 543 IFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIH 602



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 201/409 (49%), Gaps = 36/409 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A    ++L LG+Q+H +   TG  S ++V    + +Y+KCG    +  LF       
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPD 286

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V++N++   Y      E ++  FKE++LSG +    +L S++     SG  +L   IHG
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV---SGHLMLIYAIHG 343

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           YS+K  + S    + AL  +Y+K+  +E A  +F +     + SWNA+I+G   +   + 
Sbjct: 344 YSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF++M++SE +PN  T T  L ACA +    LG+ +H  +   + +S   V   L+ 
Sbjct: 404 AISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ EAR +F  MP+KN + WN +ISG+  +G   EA ++F  M   G+     T
Sbjct: 464 MYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVT 523

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL + +           HA  VK      D I NS+I  YG     E +VK +  + 
Sbjct: 524 FLCVLYACS-----------HAGLVKEG----DEIFNSMIHRYG----FEPSVKHY--AC 562

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            VD++     +    QF            ++   I P   V  +LL AC
Sbjct: 563 VVDILGRAGHLQRALQF------------IEAMPIQPGPSVWETLLGAC 599



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 12/206 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L LG  VH +V  T F+S  +V+ +L+ MYAKCG+  ++RRLFD +P+++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS-----GDSLLG 115
            V+WN++ S Y      +EA+  F EM+ SGI P   +   ++ AC+ +     GD +  
Sbjct: 486 EVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
             IH Y    G++  +     +VD+  + G+L+ A+   + +   P    W  ++  C +
Sbjct: 546 SMIHRY----GFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRI 601

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTY 200
           H+  + A  + +++   E++P+   Y
Sbjct: 602 HKDTNLARTVSEKL--FELDPDNVGY 625


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/759 (37%), Positives = 438/759 (57%), Gaps = 13/759 (1%)

Query: 18   HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER-SVVSWNSLFSCYVHCDF 76
            HG +  +G+  D  + N+++ MYAKCG F  +  +F  I  +  V+SWN++         
Sbjct: 358  HGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKS 417

Query: 77   LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS-AN 135
              + V  F  M+L+GI PN+ S  +++NAC+ S     GRKIH   +    D    S A 
Sbjct: 418  FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477

Query: 136  ALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             LV MY K G++ +A  VFK++  P   +V+WN ++     ++ +  A     +M    +
Sbjct: 478  MLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537

Query: 194  NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             P+  ++TS L +C   +  ++   L   +++   +S   +   L+ M+ +C  +++AR 
Sbjct: 538  LPDALSFTSVLSSCYCSQEAQV---LRMCILESGYRS-ACLETALISMHGRCRELEQARS 593

Query: 254  IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            +F+ M   ++++W  ++S   +N    E  +LF  M  EGV  D+ TL+T L +  +   
Sbjct: 594  VFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT 653

Query: 314  IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
            +G+ K +HA   +   E+D  + N+L++ Y  CG   +A+  F+   A DLV+   M  A
Sbjct: 654  LGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 374  YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
            YAQ GL +EA+ L+ +MQ   + PD    S+ LN     +    GK  H    + G  SD
Sbjct: 714  YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSD 773

Query: 434  TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
                  LV +YAKCG +D+A   F    D  +V  +A+IG LAQHG  +EA++MF +M +
Sbjct: 774  VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 494  DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            +GV P+  TLVS++ AC HAG+V E    F +M++ FGI P  EHYAC +D+LGRAG+ +
Sbjct: 834  EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 554  EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
             A +++  MPF+ N  VW +LLG  ++  + E+G+  A+ +  ++P  S+ HV+LSNIY 
Sbjct: 894  HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 614  SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
            + G W +    R+ M D  +K  PGMSW E+  +V+ F  GDRSH ++ EIY  LD++  
Sbjct: 954  ATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLEL 1013

Query: 674  LLNKAGYVPMVETDLH-DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
            L+ +AGY    E D   DVE+  KE+ L +HSE++A+AFGLIATPP  T+++ KNLR+C 
Sbjct: 1014 LMRRAGY----EADKGLDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCG 1069

Query: 733  DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            DCHT+ ++IS ++ REIIVRD  RFHHF NG+CSC   W
Sbjct: 1070 DCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 173/526 (32%), Positives = 284/526 (53%), Gaps = 21/526 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C    DL  G   H ++   G +   F+ N L+ MY +CG+  ++  +F  + ER+
Sbjct: 31  LLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERN 90

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSW +L S    C     A   F+ M+L S   PN ++L +M+NACA S D  +GR IH
Sbjct: 91  VVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIH 150

Query: 120 GYSIKLGYDSDMFSA----NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
               +LG +    +A    NA+++MYAK G+LEDA+AVF  I   D+VSW A +AG    
Sbjct: 151 AMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTA-MAGAYAQ 209

Query: 176 EHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           E   +  AL++F++M    + PN+ T+ +AL AC  +     G  LH  L +  +  DP+
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEASLGFDPL 266

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMP---EKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
               L++MY KCG  + A  +F  M    E +L++WN +IS  ++ G   +A ++F  + 
Sbjct: 267 ASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 291 REGVGFDQTTLSTVLKSVASFQA-IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            EG+  +  TL T+L ++A+     G  +  H    ++ +  D  I N++I  Y KCG  
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFF 386

Query: 350 EDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
             A  +F+      D+++  +M+ A        + +  +  M    I+P+     ++LNA
Sbjct: 387 SAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446

Query: 409 CANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE--IPDRG 464
           C+N  A + G+++H  I+  +  ++  + A   LV+MY KCGSI +A+  F E  +P R 
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVA-TMLVSMYGKCGSISEAELVFKEMPLPSRS 505

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           +V+W+ M+G  AQ+ R KEA     +ML+ GVLP+ ++  SVL +C
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 264/537 (49%), Gaps = 33/537 (6%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           ++++ +C  S D   G+  H      G +  +F  N L++MY + G+LE+A A+F  +E 
Sbjct: 29  TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQ 218
            ++VSW A+I+          A  LF+ M   S   PN +T  + L ACA      +GR 
Sbjct: 89  RNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 219 LHCSLIKMEIK----SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           +H  + ++ ++    +  +VG  +++MYAKCGS+++A  +F  +PEK++++W  +   + 
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYA 208

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF-QAIGVCKQ------VHALSVKT 327
           Q          +P   R    F +  L  +  +V +F  A+G C        +H+L  + 
Sbjct: 209 QE------RRFYPDALRI---FREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEA 259

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA---VDLVACTSMITAYAQFGLGEEAL 384
           +   D    N+LI+ YGKCG  E A  +FK  ++   +DLV+  +MI+A  + G   +A+
Sbjct: 260 SLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAM 319

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSA-YEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
            ++  ++   + P+S    ++LNA A     +   +  H  I + G++ D   GN++++M
Sbjct: 320 AIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISM 379

Query: 444 YAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           YAKCG    A   F  I  +  ++SW+ M+G         + +  F  ML  G+ PN ++
Sbjct: 380 YAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVS 439

Query: 503 LVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACM-IDILGRAGKFQEAMELVD 560
            +++L AC N   L    K H   + ++     ++   A M + + G+ G   EA  +  
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLILTRRR--DYVESSVATMLVSMYGKCGSISEAELVFK 497

Query: 561 TMPFQANASV-WGALLGA-ARIYKNVEVGQHAAEML-FAIEPEKSSTHVLLSNIYAS 614
            MP  + + V W  +LGA A+  ++ E      EML   + P+  S   +LS+ Y S
Sbjct: 498 EMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS 554



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 211/423 (49%), Gaps = 18/423 (4%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           YT+ L++C        G+  H  +    ++    +G  L++MY +CGS++EA  IF  M 
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT-TLSTVLKSVASFQAIGVCK 318
           E+N+++W  +IS + Q G    A +LF  M  E      + TL  +L + A+ + + + +
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 319 QVHA----LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            +HA    L ++ A  +   + N++I+ Y KCG +EDA+ +F      D+V+ T+M  AY
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 375 AQ-FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH--VHIIKFGFM 431
           AQ      +AL+++ EM  + + P+     + L AC +L     G  +H  +H    GF 
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEASLGF- 263

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR---GIVSWSAMIGGLAQHGRGKEALQMF 488
            D  A N+L+NMY KCG  + A   F  +  R    +VSW+AMI    + GR  +A+ +F
Sbjct: 264 -DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
            ++  +G+ PN +TL+++L A   +G+   A   F     + G          +I +  +
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAK 382

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV-EVGQHAAEMLFA-IEPEKSSTHV 606
            G F  A  +   + ++ +   W  +LGA+   K+  +V      ML A I+P K S   
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442

Query: 607 LLS 609
           +L+
Sbjct: 443 ILN 445



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 165/336 (49%), Gaps = 25/336 (7%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D    + +L+S      +   K  H L      E   ++ N LI+ Y +CG +E+A  IF
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAY 415
            +    ++V+ T++I+A AQ G    A  L+  M  +    P+S+   ++LNACAN    
Sbjct: 84  SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143

Query: 416 EQGKQVHVHIIKFGF----MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
             G+ +H  I + G      + T  GN+++NMYAKCGS++DA   F  IP++ +VSW+AM
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAM 203

Query: 472 IGGLAQHGR-GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
            G  AQ  R   +AL++F +ML   + PN IT ++ L AC    L      H    E   
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT--SLRDGTWLHSLLHEASL 261

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV--WGALLGAARIYKNVEVGQ 588
           G  P+  +   +I++ G+ G ++ A  +   M  +    +  W A++ A+     VE G+
Sbjct: 262 GFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISAS-----VEAGR 314

Query: 589 HAAEM-------LFAIEPEKSSTHVLLSNIYASAGM 617
           H   M       L  + P  S T + + N  A++G+
Sbjct: 315 HGDAMAIFRRLRLEGMRP-NSVTLITILNALAASGV 349



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L  C +   L LG  +H  V   G ++D  V N+L+ MY+ CG++ ++   F+ +  R 
Sbjct: 644 TLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARD 703

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN + + Y      +EAV  F++M L G++P++ + S+ +N   GS     G+  H 
Sbjct: 704 LVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHA 763

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + + G DSD+  A  LV +YAK G L++A+++F+      +V  NA+I     H  ++ 
Sbjct: 764 LAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEE 823

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS---LIKMEIKSDPIVG-- 235
           A+K+F +M+   + P++ T  S + AC    + E G    CS    +K      P +   
Sbjct: 824 AVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG----CSSFLTMKEYFGISPTLEHY 879

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
              VD+  + G ++ A  I   MP E N + W  ++ G  +  GD E
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL-GTCKLQGDAE 925


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/626 (41%), Positives = 393/626 (62%), Gaps = 9/626 (1%)

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
           K ++  ++ SWN+VIA       +  AL+ F  M+   + PN  T+  A+K+C+ +    
Sbjct: 110 KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            GRQ H   +    + D  V   LVDMY+KCG + +AR +F  +  +N+++W  +I+G++
Sbjct: 170 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 229

Query: 275 QNGGDMEAASLFPWMYREGVG--------FDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           QN     A  LF     E  G         D   + +VL + +      + + VH   +K
Sbjct: 230 QNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIK 289

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
             FE D  + N+L+DAY KCG +  + ++F   +  D+++  S+I  YAQ G+  E++++
Sbjct: 290 RGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEI 349

Query: 387 YLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +  M +D EIN ++   S++L ACA+  +   GK +H  +IK G  S+ F G S+++MY 
Sbjct: 350 FHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYC 409

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG ++ A +AF  + ++ + SWSAM+ G   HG  KEAL++F +M   GV PN+IT VS
Sbjct: 410 KCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVS 469

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+HAGL+ E  H F++M  +F ++P  EHY CM+D+LGRAG  +EA +L+  M  +
Sbjct: 470 VLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLR 529

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
            +  VWGALLGA R++KNV++G+ +A  LF ++P+    +VLLSNIYA AG W++V ++R
Sbjct: 530 PDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMR 589

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             MK++ L K PG S +++K +V+ F VGDR H + ++IY  L+++S  L + GYVP + 
Sbjct: 590 ILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMT 649

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
           + LHDV   EKE +L  HSEKLAVAFG++ T PG TI + KNLR+C DCHT+ +FISKIV
Sbjct: 650 SVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIV 709

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI+VRD  RFHHFR+G CSCG YW
Sbjct: 710 DREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 235/487 (48%), Gaps = 29/487 (5%)

Query: 12  FLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA-IPERSVVSWNSLFSC 70
           FL    H    F+GF     +     V+  +  N  +   LF+  + + +V SWNS+ + 
Sbjct: 68  FLIFPEHTAFQFSGFSKRRSICAG-AVLRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAE 126

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
                   EA+  F  M    ++PN  +    I +C+   D   GR+ H  ++  G++ D
Sbjct: 127 LARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPD 186

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-- 188
           +F ++ALVDMY+K G L DA  +F +I H +IVSW ++I G V ++    AL LF++   
Sbjct: 187 LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLV 246

Query: 189 ------KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
                    E+  +     S L AC+ +  K +   +H  LIK   + D  V   L+D Y
Sbjct: 247 EESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAY 306

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTL 301
           AKCG +  +R +F  M E+++I+WN +I+ + QNG   E+  +F  M ++G + ++  TL
Sbjct: 307 AKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTL 366

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           S VL + A   +  + K +H   +K   ES+ ++  S+ID Y KCG VE A K F     
Sbjct: 367 SAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE 426

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++ + ++M+  Y   G  +EAL+++ EM    + P+     S+L AC++    E+G   
Sbjct: 427 KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW 486

Query: 422 HVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDA---DRAFSEIPDRGIVSWSAM 471
                 F  MS  F           +V++  + G + +A    +     PD   V W A+
Sbjct: 487 ------FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD--FVVWGAL 538

Query: 472 IGGLAQH 478
           +G    H
Sbjct: 539 LGACRMH 545



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 273/557 (49%), Gaps = 64/557 (11%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K+C++  DL  G Q H   +  GF+ D FV+++LV MY+KCG   D+R LFD I  R++
Sbjct: 159 IKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNI 218

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL--SG------IRPNEFSLSSMINACAGSGDSL 113
           VSW S+ + YV  D    A+  FKE ++  SG      +  +  ++ S+++AC+   +  
Sbjct: 219 VSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKS 278

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           +   +HG+ IK G++ D+   N L+D YAK G L  +  VF  +   D++SWN++IA   
Sbjct: 279 ITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            +  +  ++++F +M K  EIN N  T ++ L ACA    + LG+ +H  +IKM ++S+ 
Sbjct: 339 QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  ++DMY KCG ++ AR  F  M EKN+ +W+ +++G+  +G   EA  +F  M   
Sbjct: 399 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458

Query: 293 GVGFDQTTLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
           GV  +  T  +VL + +           F+A+      H   V+   E        ++D 
Sbjct: 459 GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMS-----HEFDVEPGVEH----YGCMVDL 509

Query: 343 YGKCGHVEDAVKIFKESS-AVDLVACTSMITA---YAQFGLGE-EALKLYLEMQDREINP 397
            G+ G++++A  + K      D V   +++ A   +    LGE  A KL+      E++P
Sbjct: 510 LGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLF------ELDP 563

Query: 398 DSFVCSSLL-NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            +     LL N  A+   +E  +++ + +   G +     G SLV++  +       DR 
Sbjct: 564 KNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP--PGFSLVDIKGRVHVFLVGDR- 620

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED-GVLPNHITLVSVLCACNHAGL 515
             E P               QH +  E L+     L++ G +P+   + SVL    H   
Sbjct: 621 --EHP---------------QHEKIYEYLEKLSMKLQEVGYVPD---MTSVLHDVGHEEK 660

Query: 516 VAEAKHHFESMEKKFGI 532
               + H E +   FGI
Sbjct: 661 EMVLRVHSEKLAVAFGI 677



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 149/276 (53%), Gaps = 9/276 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+   +  +   VHG ++  GF+ D  V N+L+  YAKCG    SRR+FD + ER 
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V+SWNS+ + Y       E++  F  MV  G I  N  +LS+++ ACA SG   LG+ IH
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              IK+G +S++F   +++DMY K G +E A   F  +   ++ SW+A++AG  +H H  
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK 446

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-- 237
            AL++F +M  + + PN  T+ S L AC+   L E G     ++   E   +P  GV   
Sbjct: 447 EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM-SHEFDVEP--GVEHY 503

Query: 238 --LVDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVI 270
             +VD+  + G + EA  +I  +    + + W  ++
Sbjct: 504 GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/568 (44%), Positives = 376/568 (66%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           LK CA  +L   G+  H  ++ M +K+D +    L++MY+KCGS+D AR +F  MP ++L
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I    QNG + EA  L   M REG  F + T+S+VL + A+  A+  C+ +HA 
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           ++K A + + ++  +L+D Y KCG ++DAV +F+      +V  +SM   Y Q  + E+A
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+ +  +  +  D F+ SS++ ACA L+A  +GKQ++  + K GF S+ F  +SL++M
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDM 310

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG I+++ + F ++  R +V W+AMI GL++H R  E + +F +M + G+ PN +T 
Sbjct: 311 YAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTF 370

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           VSVL AC H GLV + + +F+ M K+  + P   HY+CM+D L RAG+  EA +L+  +P
Sbjct: 371 VSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLP 430

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
           F A+AS+WG+LL + R + N+E+ + AA+ LF IEP  S  ++LLSN+YA+ G WD VAK
Sbjct: 431 FNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAK 490

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R+ +K++ +KKE G SWIE+KDKV+ F VG+R+H +  EIY+KL+EV D L K GY   
Sbjct: 491 MRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVE 550

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
            + DLH V ES K++LL HHSEKLA   GL+  PP A IR+ KNLRIC DCH+  +  SK
Sbjct: 551 TQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASK 610

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              R++IVRD NRFHHF+NG CSCG +W
Sbjct: 611 FFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 174/307 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C  +K L  G   H  ++  G  +D   +N L+ MY+KCG+   +R++FD +P RS
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++           EA+    +M   G   +EF++SS++ ACA        + +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK   D ++F A AL+D+YAK G ++DAV VF+ +    +V+W+++ AG V +E  + 
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++   + +  + F  +S + ACAG+     G+Q++  L K    S+  V   L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++E+  +F  + ++N++ WN +ISG  ++   +E   LF  M + G+  +  T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 301 LSTVLKS 307
             +VL +
Sbjct: 370 FVSVLSA 376



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 204/380 (53%), Gaps = 2/380 (0%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++  CA     L G+  H   + +G  +D+ ++N L++MY+K G+++ A  VF ++    
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +VSWN +I     +   + AL L  QM+      + FT +S L ACA        + LH 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK  +  +  V   L+D+YAKCG M +A  +F  MP+++++ W+ + +G++QN    +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
           A +LF   +  G+  DQ  +S+V+ + A   A+   KQ++AL  K+ F S+ ++ +SLID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            Y KCG +E++ K+F++    ++V   +MI+  ++     E + L+ +MQ   ++P+   
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             S+L+AC ++    +G++    + K   ++ + F  + +V+  ++ G I +A    S++
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 461 PDRGIVS-WSAMIGGLAQHG 479
           P     S W +++     HG
Sbjct: 430 PFNASASMWGSLLASCRTHG 449



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 154/261 (59%), Gaps = 3/261 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +K  L     +H   +    D + FVA +L+ +YAKCG   D+  +F+++P+RS
Sbjct: 171 VLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRS 230

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+S+ + YV  +  E+A+  F++   +G++ ++F +SS+I ACAG    + G++++ 
Sbjct: 231 VVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNA 290

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G+ S++F A++L+DMYAK G +E++  VF+D+E  ++V WNA+I+G   H  +  
Sbjct: 291 LLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLE 350

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV--GVGL 238
            + LF++M+   ++PN  T+ S L AC  M L   G Q +  L+  E    P V     +
Sbjct: 351 VMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKG-QKYFDLMTKEHHLAPNVFHYSCM 409

Query: 239 VDMYAKCGSMDEARMIFHLMP 259
           VD  ++ G + EA  +   +P
Sbjct: 410 VDTLSRAGQIFEAYDLISKLP 430



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 5/285 (1%)

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           +LK  A  + +   K  HA  +    ++D    N LI+ Y KCG V+ A ++F E  +  
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS-FVCSSLLNACANLSAYEQGKQVH 422
           LV+  +MI +  Q G   EAL L L+MQ RE  P S F  SS+L ACA   A  + + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQ-REGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
              IK     + F   +L+++YAKCG + DA   F  +PDR +V+WS+M  G  Q+   +
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           +AL +F +  E G+  +   + SV+CAC     + E K    ++  K G        + +
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGK-QMNALLSKSGFCSNIFVASSL 307

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEV 586
           ID+  + G  +E+ ++   +  + N  +W A++ G +R  +++EV
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEV 351


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/772 (35%), Positives = 450/772 (58%), Gaps = 16/772 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L++C++ ++   G +   +V  +GFDS+  + ++L+  Y+KCG   ++ R+F+ +    +
Sbjct: 123 LRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDI 182

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW  + S +V      +A+  +  M+ +G+ PNEF+   ++ A +  G +  G+ +H +
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNY-GKLVHAH 241

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +    + ++    ALVDMY K  ++EDAV V K     D+  W A+I+G         A
Sbjct: 242 LMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREA 301

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +  F +M++S + PN FTY+  L AC+ +   +LG+Q+H  ++   +++D  VG  LVDM
Sbjct: 302 ITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDM 361

Query: 242 YAKCGSM-DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           Y KC +M ++A   F  +   N+I+W  +I+G  ++G + E+  +F  M   GV  +  T
Sbjct: 362 YMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFT 421

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LST+L +  + +++   +++H   +K   ++D  + N+L+DAY   G V+DA  +     
Sbjct: 422 LSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMK 481

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D++  TS+ T   Q G  E AL +   M   ++  D F  +S L+A A +   E GKQ
Sbjct: 482 HRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQ 541

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H + +K G  S     N LV++Y KCG I DA R+F EI +   VSW+ +I GLA +G 
Sbjct: 542 LHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGH 601

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
              AL  F  M   GV P+ IT + VL AC+H GLV     +F+SM +K GI+P  +HY 
Sbjct: 602 VSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYV 661

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+LGRAG+ +EAM +++TMPF+ +A ++  LLGA +++ N+ +G+H A     ++P 
Sbjct: 662 CLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPS 721

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             + +VLL+N+Y  +G  +   K RR M++  ++K PG SW+E ++ V+ FT GD SH +
Sbjct: 722 DPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQ 781

Query: 661 SKEIYAKLDE-VSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             +I+ K++  ++   N+  +              ++ + L HHSEKLAVAFGLI+TPP 
Sbjct: 782 IGKIHEKIESLIAQFRNQGIWY-------------QENRALAHHSEKLAVAFGLISTPPK 828

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           A IR+ KN+RIC DCH     ++++V REIIVRD NRFH F+ G CSC GYW
Sbjct: 829 APIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 187/603 (31%), Positives = 321/603 (53%), Gaps = 16/603 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G+ +H  ++  GF  D F++N+L+ +Y KC    ++R+LFD +P R V SW  L S Y  
Sbjct: 34  GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
               EEA+  F  M++SG  PNEF+LS+ + +C+   +   G +      K G+DS+   
Sbjct: 94  IGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW--ALKLFQQMKSS 191
            +AL+D Y+K G  ++A  VF+ + + DIVSW  +++  V  E   W  AL+L+ +M  +
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFV--EAGSWSQALQLYHRMIQT 211

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + PN FT+   L A + + L   G+ +H  L+   I+ + ++   LVDMY KC S+++A
Sbjct: 212 GVAPNEFTFVKLLAASSFLGLN-YGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDA 270

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +  L  E ++  W  +ISG  Q+    EA + F  M   GV  +  T S +L + +S 
Sbjct: 271 VKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSI 330

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVDLVACTSM 370
            A+ + KQ+H+  V    E+D  + NSL+D Y KC + +EDAV+ F+  ++ ++++ TS+
Sbjct: 331 LALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSL 390

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  +++ GL EE++K++  MQ   + P+SF  S++L AC  + +  Q +++H +IIK   
Sbjct: 391 IAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNA 450

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            +D   GN+LV+ YA  G +DDA    S +  R +++++++   + Q G  + AL +   
Sbjct: 451 DNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITH 510

Query: 491 MLEDGVLPNHITLVSVLCACNHAGL-VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           M +D V  +  +L S L A   AG+ + E          K G+         ++D+ G+ 
Sbjct: 511 MNKDDVRMDGFSLASFLSAA--AGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKC 568

Query: 550 GKFQEAME--LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE--MLFAIEPEKSSTH 605
           G   +A    L  T P   +A  W  L+       +V     A E   L  +EP++ +  
Sbjct: 569 GCIHDAHRSFLEITEP---DAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCL 625

Query: 606 VLL 608
           ++L
Sbjct: 626 LVL 628



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 233/416 (56%), Gaps = 2/416 (0%)

Query: 96  EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           E+SL   I +   S     G  IH   IK+G+  DMF +N L+ +Y K   + +A  +F 
Sbjct: 15  EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
           ++   D+ SW  +++      +++ AL+LF  M  S   PN FT ++AL++C+ +     
Sbjct: 75  EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G +    + K    S+P++G  L+D Y+KCG   EA  +F  M   ++++W +++S  ++
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
            G   +A  L+  M + GV  ++ T   +L + +SF  +   K VHA  +    E +  +
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLL-AASSFLGLNYGKLVHAHLMMWRIELNLVL 253

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             +L+D Y KC  +EDAVK+ K +   D+   T++I+ + Q     EA+  + EM+   +
Sbjct: 254 KTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGV 313

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS-IDDAD 454
            P++F  S +LNAC+++ A + GKQ+H  ++  G  +D   GNSLV+MY KC + I+DA 
Sbjct: 314 VPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAV 373

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           RAF  I    ++SW+++I G ++HG  +E++++FG M   GV PN  TL ++L AC
Sbjct: 374 RAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 193/368 (52%), Gaps = 20/368 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLFDAIPER 59
           +L AC+S   L LG Q+H  VV  G ++D  V NSLV MY KC N I D+ R F  I   
Sbjct: 323 ILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASP 382

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V+SW SL + +      EE++  F  M   G+RPN F+LS+++ AC         RK+H
Sbjct: 383 NVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLH 442

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           GY IK   D+D+   NALVD YA +G ++DA  V   ++H D++++ ++        +++
Sbjct: 443 GYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHE 502

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL +   M   ++  + F+  S L A AG+ + E G+QLHC  +K  + S   V  GLV
Sbjct: 503 MALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLV 562

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KCG + +A   F  + E + ++WN +I G   NG    A S F  M   GV  DQ 
Sbjct: 563 DLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQI 622

Query: 300 TLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           T   VL + +           FQ++   ++ H +  +     D Y+   L+D  G+ G +
Sbjct: 623 TCLLVLYACSHGGLVDMGLDYFQSM---REKHGIRPQL----DHYVC--LVDLLGRAGRL 673

Query: 350 EDAVKIFK 357
           E+A+ + +
Sbjct: 674 EEAMNVIE 681



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 149/278 (53%), Gaps = 10/278 (3%)

Query: 303 TVLKSVASF---QAI--GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           ++LK + SF   +++  G+C  +H+  +K  F+ D ++ N+L+  YGKC  V +A ++F 
Sbjct: 17  SLLKDIVSFCNSRSVRDGIC--IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    D+ + T +++AY + G  EEAL+L+  M      P+ F  S+ L +C+ L  +  
Sbjct: 75  EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G +    + K GF S+   G++L++ Y+KCG   +A R F  + +  IVSW+ M+    +
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            G   +ALQ++ +M++ GV PN  T V +L A +  GL      H   M  +  +  + +
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLK 254

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               ++D+  +    ++A++ V  +  + +  +W A++
Sbjct: 255 --TALVDMYCKCQSIEDAVK-VSKLTLEYDVFLWTAII 289


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/679 (40%), Positives = 403/679 (59%), Gaps = 6/679 (0%)

Query: 97  FSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD 156
           F   S++ AC     + LG++IHG+ +K G D D+F  NAL+ MY +   +E A  VF  
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           +   D+VSW+ +I     ++  D AL+L ++M   ++ P+     S +   A      +G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 217 RQLHCSLIKMEIKSDPIVGV----GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
           + +H  +I+    ++  +GV     L+DMYAKCG +  AR +F+ + +K +++W  +I+G
Sbjct: 215 KAMHAYVIRNS--NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
            +++    E   LF  M  E +  ++ T+ +++       A+ + KQ+HA  ++  F   
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             +  +L+D YGKC  + +A  +F  +   D++  T+M++AYAQ    ++A  L+ +M+ 
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + P      SLL+ CA   A + GK VH +I K     D     +LV+MYAKCG I+ 
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 452

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A R F E   R I  W+A+I G A HG G+EAL +F +M   GV PN IT + +L AC+H
Sbjct: 453 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           AGLV E K  FE M   FG+ P  EHY CM+D+LGRAG   EA E++ +MP + N  VWG
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           AL+ A R++KN ++G+ AA  L  IEPE    +VL+SNIYA+A  W + A VR+ MK   
Sbjct: 573 ALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVG 632

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           +KKEPG S IEV   V+ F +GD+SH + + I   L E+   LN+AGYVP   T L +++
Sbjct: 633 MKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 692

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           E EKE  L +HSEKLA+AFGLI+T P   IR+ KNLR+C DCH + + +SKI  R IIVR
Sbjct: 693 EEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVR 752

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D NRFHHFR G CSCG YW
Sbjct: 753 DRNRFHHFREGYCSCGDYW 771



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 252/497 (50%), Gaps = 4/497 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC       LG ++HG V+  G D D FV N+L++MY +C     +R +FD + ER 
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW+++          + A+   +EM    +RP+E ++ SM+N  A + +  +G+ +H 
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 121 YSIKLGYDSDM--FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           Y I+   +  M   +  AL+DMYAK G+L  A  +F  +    +VSW A+IAGC+     
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           +   KLF +M+   I PN  T  S +  C      +LG+QLH  +++        +   L
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATAL 339

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMY KC  +  AR +F     ++++ W  ++S + Q     +A +LF  M   GV   +
Sbjct: 340 VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 399

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+ ++L   A   A+ + K VH+   K   E D  +  +L+D Y KCG +  A ++F E
Sbjct: 400 VTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 459

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           + + D+    ++IT +A  G GEEAL ++ EM+ + + P+      LL+AC++     +G
Sbjct: 460 AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG 519

Query: 419 KQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLA 476
           K++   ++  FG +        +V++  + G +D+A      +P +   + W A++    
Sbjct: 520 KKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 579

Query: 477 QHGRGKEALQMFGQMLE 493
            H   +       Q+LE
Sbjct: 580 LHKNPQLGELAATQLLE 596



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 65/109 (59%)

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           +F+  S+L AC  +S  + GK++H  ++K G   D F GN+L+ MY +C  ++ A   F 
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           ++ +R +VSWS MI  L+++     AL++  +M    V P+ + +VS++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMV 202


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 287/776 (36%), Positives = 454/776 (58%), Gaps = 6/776 (0%)

Query: 1   VLKACTSKKDLFL-GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC++  +L   G ++HG++  T  +SD +V+ +L+ MY KC +  D+R++FD I  +
Sbjct: 105 VLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHK 164

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VV WN++ + Y   D  E+A+  F  M+L G++    +   +++AC+   D  + + + 
Sbjct: 165 RVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVK 224

Query: 120 GYSIKLGYDS--DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
               +  +D   D   A ALV+ Y   G+LE A   F      +++   A+I      E 
Sbjct: 225 LCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRER 283

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            D AL+LF+ M    +  +     + L AC+G    E GR +H  + ++        G  
Sbjct: 284 WDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNA 343

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++MY KCGS++EA  +F  M  +++I+WN +I+ H Q+    EA  L   M  +GV  D
Sbjct: 344 LINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKAD 403

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + +    L   A+ +A+   + +H+  V++  ++D  + N+++D YG C   +DA ++F+
Sbjct: 404 KISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFR 463

Query: 358 ESSAVDLVACTSMITAYA-QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              A D V+  +MITAYA Q  L  EAL L+ +MQ     PD     + L+ACA  ++  
Sbjct: 464 AMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLA 523

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +GK +H  I + G  S+    N+++NMYAK GS+  A + F ++P   ++SW+ MI   A
Sbjct: 524 EGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFA 583

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF-GIQPM 535
           QHG   + L+ F +M  +G LPN +T VSV+ AC+H GLV +    F S+   F  I P 
Sbjct: 584 QHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPR 643

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D++ RAGK   A + +   P + +  +   +LGA++++K+VE  + +AE L 
Sbjct: 644 AEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLM 703

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            + P++S+ +V+LSN+Y   G  D  AK+RR M +  ++KEP  S I VK +V+ F  GD
Sbjct: 704 ELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGD 763

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            ++AR+ EI  +L+ +S  + KAGY P     LHDV + +K++LL +HSEKLA+AFGLI+
Sbjct: 764 TTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLIS 823

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG ++R+ KNLR+C DCHT+ +FISKI  REI+VRD +RFHHF NG+CSCG YW
Sbjct: 824 TAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 281/586 (47%), Gaps = 17/586 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L      + L LG +VH  +  +  D   F+ + LV MY  CG+ ID++  FD +P + 
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
            ++W  L   +      E+A+  F+ M L G+ P   +  +++ AC+   + L  GR+IH
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G       +SD + +  L+ MY K  ++EDA  VF  I H  +V WNA+I      +H++
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS-------DP 232
            A+++F  M    +     T+   L AC+ ++  E+ +     L+K+ ++        D 
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK-----LVKLCVEEREHDHLHDS 238

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                LV+ Y  CG +++A   F       LI    +I+ + Q     EA  LF  M  E
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           GV  D+     VL + +  + +   + +H    +  F+      N+LI+ YGKCG +E+A
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           V++F+     D+++  ++I A+ Q     EAL L   MQ   +  D     + L  CA  
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAAS 417

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A  +G+ +H  I++ G  +D    N++++MY  C S DDA R F  +  R  VSW+AMI
Sbjct: 418 EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMI 477

Query: 473 GGLAQHGR-GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
              A   R   EAL +F QM   G +P+ I+ V+ L AC     +AE K   + + ++ G
Sbjct: 478 TAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRI-RETG 536

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           ++        ++++  ++G    A ++   MP     S W  ++ A
Sbjct: 537 LESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVIS-WNGMISA 581



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 245/513 (47%), Gaps = 25/513 (4%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           + +++  A S    LG+++H    K   D   F  + LV MY   G+L DA A F  +  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC-AGMELKELGRQ 218
            D ++W  +I        ++ AL LF+ M+   + P    + + L AC A  EL E GR+
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  L    ++SD  V   L+ MY KC S+++AR +F  +  K ++ WN +I+ + Q   
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE--SDDYIV 336
             +A  +F  M  EGV  ++ T   VL + +  + + V K V     +   +   D    
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            +L++ YG CG +E A + F     ++L+  T+MIT Y Q    +EAL+L+  M    + 
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSRHR-LELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            D   C ++LNAC+     E+G+ +H  + +  F     AGN+L+NMY KCGS+++A   
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +  R ++SW+ +I    QH +  EAL +   M  DGV  + I+ V+ L  C  +  +
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEAL 420

Query: 517 AEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           A+ +  H   +E       M ++   ++D+ G      +A  +   M  +   S W A++
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDN--AILDMYGSCKSTDDASRVFRAMKARDQVS-WNAMI 477

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
            A                 +A +P  SS  +LL
Sbjct: 478 TA-----------------YAAQPRLSSEALLL 493



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 187/383 (48%), Gaps = 10/383 (2%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   L   A     +LG+++H  + K  +   P +G  LV MY  CGS+ +A+  F  MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV-ASFQAIGVCK 318
            ++ + W  +I  H Q G   +A  LF  M  EGV         VL +  A  + +   +
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H +   TA ESD Y+  +L+  YGKC  VEDA K+F       +V   +MITAYAQ  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH--VHIIKFGFMSDTFA 436
             E+A++++  M    +  +      +L+AC+ L   E  K V   V   +   + D+  
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             +LVN Y  CG ++ A RAFS      I++ +AMI    Q  R  EAL++F  ML +GV
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 497 LPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
             + I  ++VL AC+    + E +  H F   E +F       +   +I++ G+ G  +E
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMR-EIRFDRHVNAGN--ALINMYGKCGSLEE 356

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A+E+  +M  +   S W  ++ A
Sbjct: 357 AVEVFRSMQHRDVIS-WNTIIAA 378


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/760 (35%), Positives = 441/760 (58%), Gaps = 6/760 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C + +D   GLQV   VV +G  +   VANSL+ M+       D+ RLFD + ER 
Sbjct: 151 VVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERD 210

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ S Y H +   +      +M    ++P+  +L S+++ CA S    LG  IH 
Sbjct: 211 RISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHS 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G    +   NALV+MY+  G L++A ++F+++   D++SWN +I+  V       
Sbjct: 271 LCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVE 330

Query: 181 ALK-LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+ L Q +++ E  PN  T++SAL AC+  E    GR +H  +++  +++  ++G  L+
Sbjct: 331 ALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLL 390

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY+KC SM++   +F  MP  ++++ N++  G+        A  +F WM   G+  +  
Sbjct: 391 TMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYI 450

Query: 300 T---LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           T   L    KS+    + G+   +HA   +T   SD+YI NSLI  Y  CG +E +  IF
Sbjct: 451 TMINLQGTCKSLGDLHSYGM--PLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIF 508

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              +   +++  ++I A  + G GEEA+KL+++ Q      D F  +  L++ ANL++ E
Sbjct: 509 SRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLE 568

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G Q+H   +K G   D+   N+ ++MY KCG +D   +   +   R    W+ +I G A
Sbjct: 569 EGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYA 628

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           ++G  KEA   F  M+  G  P+++T V++L AC+HAGL+ +   ++ SM   FG+ P  
Sbjct: 629 RYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGI 688

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +H  C++D+LGR GKF EA + +D MP   N  +W +LL ++R +KN+++G+ AA+ L  
Sbjct: 689 KHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLE 748

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P   S +VLLSN+YA+   W +V K+R  MK  KL K P  SW+++K++V TF +GDR
Sbjct: 749 LDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDR 808

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  +++IY KLDE+   L + GYV    + LHD +E +KE  L++HSEKLA+A+GL+  
Sbjct: 809 SHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVV 868

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           P G+TIR+ KNLR+C DCH  F+ +S +  REI++RD  R
Sbjct: 869 PEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 288/574 (50%), Gaps = 15/574 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G  +H +    G   + ++  +L+ +Y   G  ++++RLF  +P+R+VVSW ++      
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              +EEA+  ++ M   G+  N  +L+++++ C    D + G ++  + +  G  + +  
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF---QQMKS 190
           AN+L+ M+  +  ++DA  +F  +E  D +SWNA+I+   ++ H +   K F     M+ 
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMIS---MYSHEEVYSKCFIVLSDMRH 239

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGSMD 249
            E+ P++ T  S +  CA  +L  LG  +H   +   +  S P++   LV+MY+  G +D
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN-ALVNMYSTAGKLD 298

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT-TLSTVLKSV 308
           EA  +F  M  +++I+WN +IS ++Q+   +EA      + +   G   + T S+ L + 
Sbjct: 299 EAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +S +A+   + +HA+ ++ + ++   I NSL+  Y KC  +ED  ++F+     D+V+C 
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCN 418

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIK 427
            +   YA       A++++  M+   I P+     +L   C +L   +  G  +H ++ +
Sbjct: 419 VLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQ 478

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G +SD +  NSL+ MYA CG ++ +   FS I ++ ++SW+A+I    +HGRG+EA+++
Sbjct: 479 TGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKL 538

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           F      G   +   L    C  + A L + E       +  K G+          +D+ 
Sbjct: 539 FMDSQHAGNKLDRFCLAE--CLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
           G+ GK    ++ +   P       W  L+ G AR
Sbjct: 597 GKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYAR 629



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 223/463 (48%), Gaps = 4/463 (0%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---DS 112
           +P R+  SW +  S    C     A    + M    +  + F+L+S++ AC   G    +
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             G  IH  + + G   +++   AL+ +Y   G + +A  +F ++   ++VSW A++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             +   + AL  +++M+   +  N     + +  C  +E +  G Q+   ++   + +  
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+ M+     + +A  +F  M E++ I+WN +IS +       +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  D TTL +++   AS   + +   +H+L V +       ++N+L++ Y   G +++A
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE-MQDREINPDSFVCSSLLNACAN 411
             +F+  S  D+++  +MI++Y Q     EAL+   + +Q  E  P+S   SS L AC++
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS 360

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
             A   G+ +H  I++    +    GNSL+ MY+KC S++D +R F  +P   +VS + +
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
            GG A       A+++F  M   G+ PN+IT++++   C   G
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 4/308 (1%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV---GFDQTTLSTVLKSVASFQAI 314
           MP +   +W   +SG  + G +  A +L   M    V   GF   +L T  +     +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
                +HAL+ +     + YI  +L+  YG  G V +A ++F E    ++V+ T+++ A 
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           +  G  EEAL  Y  M+   +  ++   +++++ C  L     G QV  H++  G ++  
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
              NSL+ M+     + DA+R F  + +R  +SW+AMI   +      +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            V P+  TL S++  C  + LVA       S+    G+         ++++   AGK  E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGS-GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 555 AMELVDTM 562
           A  L   M
Sbjct: 300 AESLFRNM 307


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/683 (41%), Positives = 400/683 (58%), Gaps = 5/683 (0%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK-LGYDSDMFSANALVDMYAKVGNLEDA 150
           + PN  SL+S++ +   +  S LGR  H   IK L      F  N LV+MY+K+     A
Sbjct: 4   LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +     +  +V+W A+IAG V +     AL  F  M+   I PN FT+  A KA   +
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               +G+Q+H   +K    SD  VG    DMY+K G  +EAR +F  MPE+N+  WN  +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S  +  G   +A + F     EG   +  T    L + A    + + +Q+H   +++ FE
Sbjct: 182 SNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFE 241

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           +D  + N LID YGKC  V  +  IF   S  + V+  SMI +Y Q    E+A  ++L  
Sbjct: 242 ADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRA 301

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           +   I P  F+ SS+L+ACA LS  E GK VH   +K   + + F G++LV+MY KCGSI
Sbjct: 302 RKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSI 361

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML--EDGVLPNHITLVSVLC 508
           +DA+RAF E+P+R +V+W+AMIGG A  G+   A+ +F +M      V PN++T V VL 
Sbjct: 362 EDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLS 421

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+ AG V      FESM  ++GI+P  EHYAC++D+LGRAG  ++A + +  MP +   
Sbjct: 422 ACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 481

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           SVWGALLGA++++   E+G+ AA+ LF ++P  S  HVLLSN++A+AG W+    VR+ M
Sbjct: 482 SVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEM 541

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           KD  +KK  G SWI   + V+ F   D SH R+ EI A L ++   +  AGY+P     L
Sbjct: 542 KDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFAL 601

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
            D+EE EK   +++HSEK+A+AFGLI+ P G  IR+ KNLRIC DCH++ +FIS IV RE
Sbjct: 602 FDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGRE 661

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD N FH FR+  CSC  YW
Sbjct: 662 IIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 256/510 (50%), Gaps = 19/510 (3%)

Query: 13  LGLQVHGIVVFTGFDSD--EFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           LG   H  ++ T  D+    F+ N LV MY+K      ++ L    P RSVV+W +L + 
Sbjct: 24  LGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
            V       A+  F  M    I+PN+F+      A       L+G+++H  ++K G  SD
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F   +  DMY+K G  E+A  +F ++   +I +WNA ++  VL    D AL  F + + 
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRH 202

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
               PN+ T+ + L ACAG     LGRQLH  +++   ++D  V  GL+D Y KC  +  
Sbjct: 203 EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGC 262

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           + +IF  + + N ++W  +I  ++QN  + +A  +F    +EG+      +S+VL + A 
Sbjct: 263 SEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAG 322

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              + V K VH L+VK     + ++ ++L+D YGKCG +EDA + F E    +LV   +M
Sbjct: 323 LSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAM 382

Query: 371 ITAYAQFGLGEEALKLYLEMQ--DREINPD--SFVCSSLLNACANLSAYEQGKQVHVHII 426
           I  YA  G  + A+ L+ EM      + P+  +FVC  +L+AC+   +   G ++   + 
Sbjct: 383 IGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVC--VLSACSRAGSVNVGMEIFESMR 440

Query: 427 -KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---G 481
            ++G          +V++  + G ++ A +   ++P R  VS W A++G     G+   G
Sbjct: 441 GRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELG 500

Query: 482 KEALQMFGQM--LEDGVLPNHITLVSVLCA 509
           K A     ++  L+ G   NH+ L ++  A
Sbjct: 501 KVAADNLFELDPLDSG---NHVLLSNMFAA 527



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 223/468 (47%), Gaps = 40/468 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            KA  S +   +G QVH + V  G  SD FV  S   MY+K G   ++R++FD +PER++
Sbjct: 115 FKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNI 174

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            +WN+  S  V     ++A+  F E    G  PN  +  + +NACAG+    LGR++HG+
Sbjct: 175 ATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGF 234

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            ++ G+++D+  AN L+D Y K   +  +  +F  I  P+ VSW ++I   V ++  + A
Sbjct: 235 VLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKA 294

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             +F + +   I P  F  +S L ACAG+ + E+G+ +H   +K  +  +  VG  LVDM
Sbjct: 295 CLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDM 354

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY--REGVGFDQT 299
           Y KCGS+++A   F  MPE+NL+ WN +I G+   G    A +LF  M      V  +  
Sbjct: 355 YGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYV 414

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL + +            A SV    E    I  S+   YG    +E   + +  +
Sbjct: 415 TFVCVLSACS-----------RAGSVNVGME----IFESMRGRYG----IEPGAEHY--A 453

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
             VDL+    M+    QF            ++   I P   V  +LL A       E GK
Sbjct: 454 CVVDLLGRAGMVEQAYQF------------IKKMPIRPTVSVWGALLGASKMFGKSELGK 501

Query: 420 QVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
               ++ +   +    +GN   L NM+A  G  ++A     E+ D GI
Sbjct: 502 VAADNLFELDPLD---SGNHVLLSNMFAAAGRWEEATLVRKEMKDVGI 546



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 4/174 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L +G  VH + V      + FV ++LV MY KCG+  D+ R FD +PER+
Sbjct: 316 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 375

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR--PNEFSLSSMINACAGSGDSLLGRKI 118
           +V+WN++   Y H    + AV  F EM     R  PN  +   +++AC+ +G   +G +I
Sbjct: 376 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435

Query: 119 -HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIA 170
                 + G +        +VD+  + G +E A    K +   P +  W A++ 
Sbjct: 436 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG 489


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 277/773 (35%), Positives = 438/773 (56%), Gaps = 14/773 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D+ +GL VHG+VV TG   D FV N+LV  Y   G   D+ +LFD +PER+
Sbjct: 193 VIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERN 252

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+    V  D  ++              P+  ++ +++  CA   +  +G+ +HG
Sbjct: 253 LVSWNSMIR--VFSDNGDDG----------AFMPDVATVVTVLPVCAREREIGVGKGVHG 300

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++KL  D ++   NAL+DMY+K G + D+  +FK   + ++VSWN ++ G         
Sbjct: 301 WAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHG 360

Query: 181 ALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              L +QM   S ++  +  T  +A+  C    +    ++LHC  +K E   D ++    
Sbjct: 361 TFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAF 420

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V  YAKCGS+  A+ +FH +  K L +WN +I G+ Q+     +      M   G+  D 
Sbjct: 421 VASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDN 480

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+ ++L + +  +++ + K+VH   ++   E D ++  S++  Y  CG +     +F  
Sbjct: 481 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDA 540

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                LV+  ++IT + Q G  E AL L+ +M    I P      ++  AC+ L +   G
Sbjct: 541 MEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG 600

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           ++ H + +K     + F   S+++MYAK G+I  + + F+ + ++   SW+AMI G   H
Sbjct: 601 REAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMH 660

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GR KEA+++F +M   G  P+ +T + VL ACNH+GL+ E   + + M+  FG++P  +H
Sbjct: 661 GRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKH 720

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC+ID+LGRAG+   A+ +   M  + +  +W +LL   RI++N+E+G+  A  LF +E
Sbjct: 721 YACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLE 780

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PEK   +VLLSN+YA  G WD+V +VR+ MK+  L+K+ G SWIE+  KV++F VG+R  
Sbjct: 781 PEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFL 840

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
              +EI +    +   + K GY P   +  HD+ E EK + L  HSEKLA+ +GLI T  
Sbjct: 841 DGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSE 900

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G T+RV KNLRICVDCH + + ISK++ REI+VRD  RFHHF  G CSCG YW
Sbjct: 901 GTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 297/583 (50%), Gaps = 26/583 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVV-FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+A   +KD+ +G ++H +V   T   SD+ +   ++ MYA CG+  DSR  FDA+  +
Sbjct: 90  LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN++ S Y   +   E +  F +M+  + + P+ F+   +I ACAG  D  +G  +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  +K G   D+F  NALV  Y   G + DA+ +F  +   ++VSWN++I   V  ++ 
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIR--VFSDNG 267

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D               P++ T  + L  CA      +G+ +H   +K+ +  + +V   L
Sbjct: 268 D----------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNAL 317

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY--REGVGF 296
           +DMY+K G + +++MIF L   KN+++WN ++ G    G       L   M    E V  
Sbjct: 318 MDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKA 377

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D+ T+   +        +   K++H  S+K  F  D+ + N+ + +Y KCG +  A ++F
Sbjct: 378 DEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVF 437

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
               +  L +  ++I  YAQ      +L  +L+M++  + PD+F   SLL+AC+ L +  
Sbjct: 438 HGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLR 497

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GK+VH  II+     D F   S++++Y  CG +      F  + D  +VSW+ +I G  
Sbjct: 498 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHL 557

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G  + AL +F QM+  G+ P  I++++V  AC+   L+   +   E+    + ++ + 
Sbjct: 558 QNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS---LLPSLRLGREA--HAYALKHLL 612

Query: 537 EHYA----CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           E  A     +ID+  + G   ++ ++ + +  ++ AS W A++
Sbjct: 613 EDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS-WNAMI 654



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 210/418 (50%), Gaps = 16/418 (3%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD 156
           +L  ++ A     D  +GRKIH   S      SD      ++ MYA  G+ +D+ + F  
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKEL 215
           +   ++  WNAVI+    +E     L++F +M S + + P+ FT+   +KACAG+    +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGI 205

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G  +H  ++K  +  D  VG  LV  Y   G + +A  +F +MPE+NL++WN +I     
Sbjct: 206 GLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSD 265

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG D    +  P         D  T+ TVL   A  + IGV K VH  +VK + + +  +
Sbjct: 266 NGDD---GAFMP---------DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVV 313

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDR 393
            N+L+D Y K G + D+  IFK ++  ++V+  +M+  ++  G       L  +M     
Sbjct: 314 NNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSE 373

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           ++  D     + +  C + S     K++H + +K  F+ D    N+ V  YAKCGS+  A
Sbjct: 374 DVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYA 433

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            R F  I  + + SW+A+IGG AQ    + +L    QM   G+LP++ T+ S+L AC+
Sbjct: 434 QRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 56/329 (17%)

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAFESDDYI 335
            GD E++S    + RE +G        +L++    + I + +++H L S  T   SDD +
Sbjct: 70  AGDDESSSDVFLLVREALGL-------LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVL 122

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-E 394
              +I  Y  CG  +D+   F    + +L    ++I++Y++  L  E L+++++M  +  
Sbjct: 123 CTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTH 182

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           + PD+F    ++ ACA +S    G  VH  ++K G + D F GN+LV+ Y   G + DA 
Sbjct: 183 LLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDAL 242

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV-LPNHITLVSVLCACNHA 513
           + F  +P+R +VSW++MI   + +G             +DG  +P+  T+V+VL  C   
Sbjct: 243 KLFDIMPERNLVSWNSMIRVFSDNG-------------DDGAFMPDVATVVTVLPVC--- 286

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
                      + E++ G+            + G A K     ELV         S WG 
Sbjct: 287 -----------AREREIGVGK---------GVHGWAVKLSLDKELVVNNALMDMYSKWGC 326

Query: 574 LLGAARIYK----------NVEVGQHAAE 592
           ++ +  I+K          N  VG  +AE
Sbjct: 327 IIDSQMIFKLNNNKNVVSWNTMVGGFSAE 355


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 262/681 (38%), Positives = 405/681 (59%), Gaps = 4/681 (0%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P   + ++++  CA   D   GR +H      G  S+  ++ AL +MY K     DA  V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE--INPNMFTYTSALKACAGME 211
           F  +   D V+WNAV+AG   +     A++   +M+  E    P+  T  S L ACA   
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
                R++H   ++  +     V   ++D Y KCG+++ AR +F  MP +N ++WN +I 
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+  NG   EA +LF  M +EGV     ++   L++      +   ++VH L V+    S
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           +  + N+LI  Y KC   + A ++F E  +    ++  +MI  + Q    E+A +L+  M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q   + PDSF   S++ A A++S   Q + +H + I+     D +   +L++MY+KCG +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             A R F    DR +++W+AMI G   HG G+ A+++F +M   G LPN  T +SVL AC
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +HAGLV E + +F SM+K +G++P  EHY  M+D+LGRAGK  EA   +  MP +   SV
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISV 493

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           +GA+LGA +++KNVE+ + +A+++F + PE+   HVLL+NIYA+A MW +VA+VR  M+ 
Sbjct: 494 YGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEK 553

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             L+K PG S I++K++V+TF  G  +H  +K+IYA+L ++ + +   GYVP  ++ +HD
Sbjct: 554 KGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDS-IHD 612

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           VE+  K QLL  HSEKLA+A+GLI T PG TI++KKNLR+C DCH + + IS +  REII
Sbjct: 613 VEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREII 672

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           +RD+ RFHHF++G CSCG YW
Sbjct: 673 MRDIQRFHHFKDGKCSCGDYW 693



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/542 (28%), Positives = 271/542 (50%), Gaps = 15/542 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C ++ DL  G  VH  +   G  S+   + +L  MY KC    D+RR+FD +P R 
Sbjct: 22  LLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRD 81

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            V+WN++ + Y        A+     M     G RP+  +L S++ ACA +      R++
Sbjct: 82  RVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREV 141

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H ++++ G D  +  + A++D Y K G +E A AVF  +   + VSWNA+I G   + + 
Sbjct: 142 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNA 201

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF +M    ++    +  +AL+AC  +   +  R++H  L+++ + S+  V   L
Sbjct: 202 TEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNAL 261

Query: 239 VDMYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           +  YAKC   D A  +F+ L  +K  I+WN +I G  QN    +A  LF  M  E V  D
Sbjct: 262 ITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPD 321

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             TL +V+ +VA        + +H  S++   + D Y++ +LID Y KCG V  A ++F 
Sbjct: 322 SFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFD 381

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
            +    ++   +MI  Y   G G+ A++L+ EM+     P+     S+L AC++    ++
Sbjct: 382 SARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 441

Query: 418 GKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           G++    + K +G         ++V++  + G +D+A      +P + GI  + AM+G  
Sbjct: 442 GQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGAC 501

Query: 476 AQHGR---GKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
             H      +E+ Q+  ++  E+GV   H+ L ++    +    VA  +    +MEKK G
Sbjct: 502 KLHKNVELAEESAQIIFELGPEEGVY--HVLLANIYANASMWKDVARVR---TAMEKK-G 555

Query: 532 IQ 533
           +Q
Sbjct: 556 LQ 557


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/714 (37%), Positives = 427/714 (59%), Gaps = 44/714 (6%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  F L+++++A A        R++     +     +++S N L+  Y+K+  L +   V
Sbjct: 42  PEIFLLNNLVSAYAKFDRITYARRVFDQMPQ----RNLYSWNTLLSSYSKLACLPEMERV 97

Query: 154 FKDIEHPDIVSWNAVIA-----GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           F  +   D+VSWN++I+     G +L     + L L+    +   N N    ++ L   +
Sbjct: 98  FHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLY----NGPFNLNRIALSTMLILAS 153

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK------------------------ 244
                 LG Q+H  ++K   +S   VG  LVDMY+K                        
Sbjct: 154 KQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNT 213

Query: 245 -------CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
                  C  ++++R +F+ M EK+ I+W  +I+G  QNG D EA  LF  M  E +  D
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q T  +VL +     A+   KQVHA  ++T ++ + ++ ++L+D Y KC  ++ A  +F+
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFR 333

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           + +  ++V+ T+M+  Y Q G  EEA+K++ +MQ+  I PD F   S++++CANL++ E+
Sbjct: 334 KMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G Q H   +  G +S     N+LV +Y KCGSI+D+ R FSE+     VSW+A++ G AQ
Sbjct: 394 GAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQ 453

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            G+  E L++F  ML  G  P+ +T + VL AC+ AGLV +    FESM K+  I P+++
Sbjct: 454 FGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIED 513

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CMID+  RAG+ +EA + ++ MPF  +A  W +LL + R ++N+E+G+ AAE L  +
Sbjct: 514 HYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKL 573

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP  +++++LLS+IYA+ G W+ VA +R+ M+D  L+KEPG SWI+ K++V+ F+  D+S
Sbjct: 574 EPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQS 633

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           +  S +IY++L++++  + + GYVP + + LHDV++SEK ++L HHSEKLA+AFGLI  P
Sbjct: 634 NPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIP 693

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PG  IRV KNLR+C DCH + ++ISKI  REI+VRD  RFH F++G CSCG +W
Sbjct: 694 PGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 251/481 (52%), Gaps = 38/481 (7%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-I 92
           N+L+  Y+K     +  R+F A+P R +VSWNSL S Y    FL ++V  +  M+ +G  
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG------- 145
             N  +LS+M+   +  G   LG ++HG+ +K G+ S +F  + LVDMY+K G       
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 146 ------------------------NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
                                    +ED+  +F D++  D +SW A+IAG   +  +  A
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + LF++M+   +  + +T+ S L AC G+   + G+Q+H  +I+ + + +  VG  LVDM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KC S+  A  +F  M  KN+++W  ++ G+ QNG   EA  +F  M   G+  D  TL
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +V+ S A+  ++    Q H  ++ +   S   + N+L+  YGKCG +ED+ ++F E S 
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
           VD V+ T++++ YAQFG   E L+L+  M      PD      +L+AC+     ++G Q+
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498

Query: 422 HVHIIK---FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
              +IK      + D +    +++++++ G +++A +  +++P     + W++++     
Sbjct: 499 FESMIKEHRIIPIEDHYT--CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRF 556

Query: 478 H 478
           H
Sbjct: 557 H 557



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 258/567 (45%), Gaps = 84/567 (14%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           LGLQVHG VV  GF S  FV + LV MY+K G    +R+ FD +PE++VV +N+L +  +
Sbjct: 160 LGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLM 219

Query: 73  HCDFLE-------------------------------EAVCFFKEMVLSGIRPNEFSLSS 101
            C  +E                               EA+  F+EM L  +  ++++  S
Sbjct: 220 RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGS 279

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++ AC G      G+++H Y I+  Y  ++F  +ALVDMY K  +++ A  VF+ +   +
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKN 339

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +VSW A++ G   + +++ A+K+F  M+++ I P+ FT  S + +CA +   E G Q HC
Sbjct: 340 VVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHC 399

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             +   + S   V   LV +Y KCGS++++  +F  M   + ++W  ++SG+ Q G   E
Sbjct: 400 RALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANE 459

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
              LF  M   G   D+ T   VL                A S     +  + I  S+I 
Sbjct: 460 TLRLFESMLAHGFKPDKVTFIGVLS---------------ACSRAGLVQKGNQIFESMIK 504

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            + +   +ED                T MI  +++ G  EEA K   +M     +PD+  
Sbjct: 505 EH-RIIPIEDHY--------------TCMIDLFSRAGRLEEARKFINKM---PFSPDAIG 546

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            +SLL++C      E GK     ++K     +T +   L ++YA  G  ++       + 
Sbjct: 547 WASLLSSCRFHRNMEIGKWAAESLLKLE-PHNTASYILLSSIYAAKGKWEEVANLRKGMR 605

Query: 462 DRGI-----VSWSAMIGGL----AQHGRGKEALQMFGQ-------MLEDGVLPNHITLVS 505
           D+G+      SW      +    A       + Q++ +       M+++G +P+   + S
Sbjct: 606 DKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPD---MNS 662

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGI 532
           VL   + +  +    HH E +   FG+
Sbjct: 663 VLHDVDDSEKIKMLNHHSEKLAIAFGL 689



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 92/550 (16%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   LK C         +++HC +IK     +  +   LV  YAK   +  AR +F  MP
Sbjct: 18  YCELLKHCRDT------KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLF---------PW---------------------- 288
           ++NL +WN ++S + +     E   +F          W                      
Sbjct: 72  QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131

Query: 289 -MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK-- 345
            +Y      ++  LST+L   +    + +  QVH   VK  F+S  ++ + L+D Y K  
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191

Query: 346 -----------------------------CGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
                                        C  +ED+ ++F +    D ++ T+MI  + Q
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQ 251

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            GL  EA+ L+ EM+   +  D +   S+L AC  + A ++GKQVH +II+  +  + F 
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           G++LV+MY KC SI  A+  F ++  + +VSW+AM+ G  Q+G  +EA+++F  M  +G+
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGI 371

Query: 497 LPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            P+  TL SV+ +C N A L   A+ H  ++    G+         ++ + G+ G  +++
Sbjct: 372 EPDDFTLGSVISSCANLASLEEGAQFHCRALVS--GLISFITVSNALVTLYGKCGSIEDS 429

Query: 556 MELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEML-FAIEPEKSSTHVLLSNIYA 613
             L   M +    S W AL+ G A+  K  E  +    ML    +P+K +   +LS   +
Sbjct: 430 HRLFSEMSYVDEVS-WTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSAC-S 487

Query: 614 SAGMWDNVAKV-RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
            AG+     ++    +K++++        I ++D  YT  +   S A       +L+E  
Sbjct: 488 RAGLVQKGNQIFESMIKEHRI--------IPIEDH-YTCMIDLFSRA------GRLEEAR 532

Query: 673 DLLNKAGYVP 682
             +NK  + P
Sbjct: 533 KFINKMPFSP 542



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 149/274 (54%), Gaps = 4/274 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G QVH  ++ T +  + FV ++LV MY KC +   +  +F  +  ++
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKN 339

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++   Y    + EEAV  F +M  +GI P++F+L S+I++CA       G + H 
Sbjct: 340 VVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHC 399

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G  S +  +NALV +Y K G++ED+  +F ++ + D VSW A+++G       + 
Sbjct: 400 RALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANE 459

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
            L+LF+ M +    P+  T+   L AC+   L + G Q+  S+IK E +  PI      +
Sbjct: 460 TLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK-EHRIIPIEDHYTCM 518

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
           +D++++ G ++EAR   + MP   + I W  ++S
Sbjct: 519 IDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 302/783 (38%), Positives = 462/783 (59%), Gaps = 12/783 (1%)

Query: 1   VLKACT-SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V  AC+ ++ D+ L  Q+   +  +G  +D FV + LV  +AK G+   +R++F+ +  R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFS--LSSMINACAGSGDSLL-G 115
           + V+ N L    V   + EEA   F +M  +  + P  +   LSS           L  G
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332

Query: 116 RKIHGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           R++HG+ I  G    M    N LV+MYAK G++ DA  VF  +   D VSWN++I G   
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +     A++ ++ M+  +I P  FT  S+L +CA ++  +LG+Q+H   +K+ I  +  V
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREG 293
              L+ +YA+ G ++E R IF  MPE + ++WN +I    ++   + EA   F    R G
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              ++ T S+VL +V+S     + KQ+H L++K     +    N+LI  YGKCG ++   
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572

Query: 354 KIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           KIF + +   D V   SMI+ Y    L  +AL L   M       DSF+ +++L+A A++
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +  E+G +VH   ++    SD   G++LV+MY+KCG +D A R F+ +P R   SW++MI
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692

Query: 473 GGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
            G A+HG+G+EAL++F  M  DG   P+H+T V VL AC+HAGL+ E   HFESM   +G
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA--RIYKNVEVGQH 589
           + P  EH++CM D+LGRAG+  +  + ++ MP + N  +W  +LGA      +  E+G+ 
Sbjct: 753 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 812

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           AAEMLF +EPE +  +VLL N+YA+ G W+++ K R+ MKD  +KKE G SW+ +KD V+
Sbjct: 813 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 872

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F  GD+SH  +  IY KL E++  +  AGYVP     L+D+E+  KE++L +HSEKLAV
Sbjct: 873 MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAV 932

Query: 710 AFGLIATPPGA-TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           AF L A       IR+ KNLR+C DCH++F++ISKI  R+II+RD NRFHHF++G+CSC 
Sbjct: 933 AFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCS 992

Query: 769 GYW 771
            +W
Sbjct: 993 DFW 995



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/492 (31%), Positives = 257/492 (52%), Gaps = 17/492 (3%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
            D D ++ N+L+  Y + G+ + +R++FD +P R+ VSW  + S Y      +EA+ F +
Sbjct: 32  LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91

Query: 86  EMVLSGIRPNEFSLSSMINACA--GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           +MV  GI  N+++  S++ AC   GS   L GR+IHG   KL Y  D   +N L+ MY K
Sbjct: 92  DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151

Query: 144 -VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
            +G++  A+  F DIE  + VSWN++I+          A ++F  M+     P  +T+ S
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211

Query: 203 AL-KACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            +  AC+  E    L  Q+ C++ K  + +D  VG GLV  +AK GS+  AR +F+ M  
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF---QAIGVC 317
           +N +  N ++ G ++     EA  LF  M    +     +   +L S   +   + +G+ 
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLK 330

Query: 318 K--QVHALSVKTAFESDDYIV---NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           K  +VH   + T     D++V   N L++ Y KCG + DA ++F   +  D V+  SMIT
Sbjct: 331 KGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
              Q G   EA++ Y  M+  +I P SF   S L++CA+L   + G+Q+H   +K G   
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG-KEALQMFGQM 491
           +    N+L+ +YA+ G +++  + FS +P+   VSW+++IG LA+  R   EA+  F   
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508

Query: 492 LEDGVLPNHITL 503
              G   N IT 
Sbjct: 509 QRAGQKLNRITF 520



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 171/597 (28%), Positives = 290/597 (48%), Gaps = 25/597 (4%)

Query: 1   VLKACT--SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-GNFIDSRRLFDAIP 57
           VL+AC       +  G Q+HG++    +  D  V+N L+ MY KC G+   +   F  I 
Sbjct: 108 VLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE 167

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI-NACA-GSGDSLLG 115
            ++ VSWNS+ S Y        A   F  M   G RP E++  S++  AC+    D  L 
Sbjct: 168 VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL 227

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            +I     K G  +D+F  + LV  +AK G+L  A  VF  +E  + V+ N ++ G V  
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287

Query: 176 EHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKE-----LGRQLHCSLIKMEIK 229
           +  + A KLF  M S  +++P   +Y   L +     L E      GR++H  +I   + 
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL- 344

Query: 230 SDPIVGV--GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
            D +VG+  GLV+MYAKCGS+ +AR +F+ M +K+ ++WN +I+G  QNG  +EA   + 
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M R  +     TL + L S AS +   + +Q+H  S+K   + +  + N+L+  Y + G
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLG-EEALKLYLEMQ--DREINPDSFVCSS 404
           ++ +  KIF      D V+  S+I A A+      EA+  +L  Q   +++N  +F    
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-R 463
              +  +    E GKQ+H   +K     +    N+L+  Y KCG +D  ++ FS + + R
Sbjct: 525 SAVSSLSFG--ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
             V+W++MI G   +    +AL +   ML+ G   +     +VL A      + E     
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL-ERGMEV 641

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
            +   +  ++      + ++D+  + G+   A+   +TMP + N+  W +++ G AR
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYAR 697



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 235/490 (47%), Gaps = 20/490 (4%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S + +C G   +   R  H    K   D D++  N L++ Y + G+   A  VF ++   
Sbjct: 8   SFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA--GMELKELGRQ 218
           + VSW  +++G   +  +  AL   + M    I  N + + S L+AC   G      GRQ
Sbjct: 66  NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           +H  + K+    D +V   L+ MY KC GS+  A   F  +  KN ++WN +IS + Q G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA--IGVCKQVHALSVKTAFESDDYI 335
               A  +F  M  +G    + T  +++ +  S     + + +Q+     K+   +D ++
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-E 394
            + L+ A+ K G +  A K+F +    + V    ++    +   GEEA KL+++M    +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305

Query: 395 INPDSFVCSSLLNACANLSAYEQ-----GKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCG 448
           ++P+S+V   LL++    S  E+     G++VH H+I  G +      GN LVNMYAKCG
Sbjct: 306 VSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           SI DA R F  + D+  VSW++MI GL Q+G   EA++ +  M    +LP   TL+S L 
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423

Query: 509 ACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
           +C         +  H ES+  K GI         ++ +    G   E  ++  +MP    
Sbjct: 424 SCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481

Query: 568 ASVWGALLGA 577
            S W +++GA
Sbjct: 482 VS-WNSIIGA 490


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/699 (38%), Positives = 416/699 (59%), Gaps = 1/699 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC + ++  +G+QVHG+VV  GFD D    ++L+ MYAKC    DS  +F  +PE++
Sbjct: 187 VLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKN 246

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++ +  V  D   E +  FKEM   G+  ++   +S+  +CA      LG+++H 
Sbjct: 247 WVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHS 306

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + SD+    A +DMYAK G + DA  V   +    + S+NA+I G    +    
Sbjct: 307 HALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQ 366

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALK FQ +  + +  +  T + AL ACA +     GRQ+H   +K    S+  V   ++D
Sbjct: 367 ALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILD 426

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++ EA  +F +M  ++ ++WN +I+   QNG + E  + F  M    +  D  T
Sbjct: 427 MYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFT 486

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A  QA+    ++H   +K+    D ++  +L+D Y KCG +E A KI   + 
Sbjct: 487 YGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTE 546

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++I+ ++     E+A K +  M +  +NPD+F  +++L+ CANL+    GKQ
Sbjct: 547 QKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQ 606

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK    SD +  ++LV+MY+KCG++ D+   F + P+R  V+W+AM+ G A HG 
Sbjct: 607 IHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGL 666

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+EAL++F  M    V PNH T VSVL AC H GLV +  H+F+ M  ++G+ P  EHY+
Sbjct: 667 GEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYS 726

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DILGR+G+  EA+ LV  MPF+A+A +W  LL   +I+ NVEV + A   L  ++P+
Sbjct: 727 CMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQ 786

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS  VLLSNIYA AGMW NV+++R+ M+ NKLKKEPG SWIE+KD+V+ F VGD+ H R
Sbjct: 787 DSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPR 846

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
            +EIY KL  +   +   GY+P  +  L D E  E  QL
Sbjct: 847 DEEIYEKLGVLIGEMQSVGYIPDCDV-LLDEEVEEPAQL 884



 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 195/608 (32%), Positives = 320/608 (52%), Gaps = 37/608 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + C+ +  L  G Q H  ++F GF+   FV+N L+ MY KC     + ++FD +  R 
Sbjct: 55  IYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRD 114

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPN--------------- 95
           VVS+NS+ S Y  C  ++ A  FF EM          V+SG   N               
Sbjct: 115 VVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGR 174

Query: 96  ------EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
                   SL+ ++ AC    +  +G ++HG  +K G+D D+ + +AL+ MYAK   L+D
Sbjct: 175 CGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDD 234

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           +++VF ++   + VSW+A+IAGCV ++ N   L+LF++M+   +  +   Y S  ++CA 
Sbjct: 235 SLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAA 294

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +    LG++LH   +K    SD IVG   +DMYAKCG M +A+ +   MP+ +L ++N +
Sbjct: 295 LSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAI 354

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ ++    +A   F  + + G+GFD+ TLS  L + AS +     +QVH L+VK+  
Sbjct: 355 IVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSIS 414

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            S+  + N+++D YGKC  + +A  +F      D V+  ++I A  Q G  EE L  +  
Sbjct: 415 MSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFAS 474

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD F   S+L ACA   A   G ++H  IIK G   D+F G +LV+MY KCG 
Sbjct: 475 MIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGM 534

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+ AD+       + +VSW+A+I G +   + ++A + F +MLE GV P++ T  +VL  
Sbjct: 535 IEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDT 594

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQAN 567
           C +   V   K     + K+   +   + Y C  ++D+  + G  Q++  + +  P   +
Sbjct: 595 CANLATVGLGKQIHAQIIKQ---ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NRD 650

Query: 568 ASVWGALL 575
              W A+L
Sbjct: 651 FVTWNAML 658



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 249/520 (47%), Gaps = 35/520 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + S +   C+       G++ H   I  G++   F +N L+ MY K   L+ A  VF  +
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI------------------NPNMF- 198
              D+VS+N++I+G       D A K F +M   ++                  + ++F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 199 ------------TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
                       +    LKAC  +E  ++G Q+H  ++K     D + G  L+ MYAKC 
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +D++  +F  +PEKN ++W+ +I+G +QN  ++E   LF  M   GVG  Q+  +++ +
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S A+  A+ + K++H+ ++K+AF SD  +  + +D Y KCG + DA K+        L +
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             ++I  YA+   G +ALK +  +    +  D    S  LNACA++    +G+QVH   +
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K   MS+    N++++MY KC ++ +A   F  +  R  VSW+A+I    Q+G  +E L 
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470

Query: 487 MFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            F  M+   + P+  T  SVL AC     L    + H   ++   G        A ++D+
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG--AALVDM 528

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
             + G  ++A ++ D    Q     W A++    + +  E
Sbjct: 529 YCKCGMIEKADKIHDRTE-QKTMVSWNAIISGFSLLQQSE 567



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 199/370 (53%), Gaps = 14/370 (3%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           ++  YA CG MD AR  F+ MPE+++++WN VISG LQNG   ++  +F  M R GVGFD
Sbjct: 121 IISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFD 180

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + +L+ VLK+  + +   +  QVH L VK  F+ D    ++L+  Y KC  ++D++ +F 
Sbjct: 181 RASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFS 240

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    + V+ ++MI    Q     E L+L+ EMQ   +     + +SL  +CA LSA   
Sbjct: 241 ELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRL 300

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GK++H H +K  F SD   G + ++MYAKCG + DA +  S +P   + S++A+I G A+
Sbjct: 301 GKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYAR 360

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME-KKFGIQPMQ 536
             RG +AL+ F  +L+ G+  + ITL   L AC      A  +   E  +     ++ + 
Sbjct: 361 SDRGFQALKSFQLLLKTGLGFDEITLSGALNAC------ASIRGDLEGRQVHGLAVKSIS 414

Query: 537 EHYAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN-VEVGQHAA 591
               C    ++D+ G+     EA +L D M  + +A  W A++ A     N  E   H A
Sbjct: 415 MSNICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQNGNEEETLAHFA 473

Query: 592 EMLFA-IEPE 600
            M+ + +EP+
Sbjct: 474 SMIHSRMEPD 483


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/677 (40%), Positives = 415/677 (61%), Gaps = 5/677 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDI 157
           L+S++ +C  +GD   GR +H   +  G  +   F AN L+ MY+   +L  A+ +F  +
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              + VSW  +++G   +  +  AL  F  M+ + + P  F  +SA +A A +     G 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           QLHC  +++   ++  V   L DMY+KCG + EA  +F  MP+K+ +AW  +I G+ +NG
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 278 GDMEAASL-FPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
             +EAA L F  M REG VG DQ    +VL +    +   + K +H    K  FE +  +
Sbjct: 203 -SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 261

Query: 336 VNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
            N+LID Y K   VE A ++ K +    ++V+ TSMI  Y +    EEAL +Y+E++ + 
Sbjct: 262 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 321

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           + P+ F  SS++  CA  +  EQG Q+H  +IK   + D+F G++LV+MY KCG I  + 
Sbjct: 322 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 381

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           + F+EI  R  ++W+A+I   AQHG G+EA+Q F +M+  G+ PNHI  VS+L AC+HAG
Sbjct: 382 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 441

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           LV E   +F SM++  GI+P +EHY+C+ID  GRAG+  EA + +  MP + NA  W +L
Sbjct: 442 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 501

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           LGA R+  + E+G+ AA+ L  +EP  +  HV LS IYAS G W++V  VR+ M+D+++K
Sbjct: 502 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 561

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           K PG SW++   K + F   D SH + K+IY KL+E++  + + GY+P       ++E+ 
Sbjct: 562 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDI 621

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
            KE++L +HSE++AVAF LI+ P    I VKKNLRIC+DCHT+F+FI K+  R+IIVRD 
Sbjct: 622 AKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDN 681

Query: 755 NRFHHFRNGSCSCGGYW 771
           +RFHHF NG CSCG YW
Sbjct: 682 SRFHHFVNGRCSCGDYW 698



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 259/518 (50%), Gaps = 17/518 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS-DEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L++C    DL  G  +H  +V +G  +   F+AN L+ MY+ C +   + RLF A+P R
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + VSW +L S         +A+  F  M  +G+ P  F+LSS   A A  G  L G ++H
Sbjct: 86  NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLH 145

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              ++LG+D+++F A+ L DMY+K G L +A  VF  +   D V+W A+I G   +   +
Sbjct: 146 CVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLE 205

Query: 180 WALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A+  F+ MK    +  +   + S L A  G++   L + +HC + K   + +  V   L
Sbjct: 206 AAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNAL 265

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIV-----ISGHLQNGGDMEAASLFPWMYREG 293
           +DMYAK   ++ A  +  + P      WN+V     I G+++     EA  ++  + R+G
Sbjct: 266 IDMYAKSMDVESASRVLKIDPG----GWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 321

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  ++ T S+++K  A    +    Q+HA  +KT    D ++ ++L+D YGKCG +  ++
Sbjct: 322 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 381

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F E      +A  ++I  +AQ G G EA++ +  M    I P+     SLL AC++  
Sbjct: 382 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 441

Query: 414 AYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAM 471
             ++G K  +      G        + +++ Y + G +D+A +  SE+P +     W ++
Sbjct: 442 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 501

Query: 472 IGGLAQHGRGKEALQMFGQ---MLEDGVLPNHITLVSV 506
           +G     G  KE  ++  Q    LE G    H++L  +
Sbjct: 502 LGACRMRG-SKELGEVAAQNLMKLEPGNTGIHVSLSGI 538


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/687 (38%), Positives = 408/687 (59%), Gaps = 2/687 (0%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+L G++ N  +  +++N+         G+ IH    +  +  D+F   ALV+ Y K G+
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L DA  VF  +    + +WN++I+   + E +  A  +FQ+M+      +  T+ S L A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C   E  + G+ +  S+ +   + D  VG  L+ MYA+C S + A  +F  M +KNLI W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           + +I+    +G   EA   F  M +EG+  ++ T  ++L    +   +    ++H L  +
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240

Query: 327 TAFESDDYIVNSLIDAYGKC--GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
              +    + N+L++ YG+C  G ++ A  I +E     + A   +I  Y   G   EAL
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           + Y  +Q   I  D     S+LNAC + ++  +GK +H + ++ G  SD    N+L NMY
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMY 360

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCGS+++A R F  +P R  VSW+ M+   AQHG  +E L++  +M ++GV  N IT V
Sbjct: 361 SKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFV 420

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           SVL +C+HAGL+AE   +F S+    GI+   EHY C++D+LGRAGK QEA + +  MP 
Sbjct: 421 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPS 480

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           +     W +LLGA R++K+++ G+ AA  L  ++P  SS  V+LSNIY+  G W N AK+
Sbjct: 481 EPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKL 540

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           RR M   ++KK PG+S I+VK+KV+ F V D SH R+ EIY K++E+   + +AGYVP  
Sbjct: 541 RRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDT 600

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
           +  LHDV+E +KE LL +HSEKLA+AFGLI+TP  +++ + KNLR+C DCHT+ +FISKI
Sbjct: 601 KMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKI 660

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
             REI+VRD +RFHHFR+GSCSC  YW
Sbjct: 661 TGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 250/493 (50%), Gaps = 11/493 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +      L  G  +H  V  +    D FV  +LV  Y KCG+  D+R++FD +P RS
Sbjct: 16  VLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRS 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +WNS+ S Y   +   EA   F+ M   G R +  +  S+++AC    +   G+ +  
Sbjct: 76  VGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRE 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +  ++ D+F   AL+ MYA+  + E+A  VF  ++  ++++W+A+I     H H   
Sbjct: 136 SISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGE 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKA-CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+ F+ M+   I PN  T+ S L        L+EL R +H  + +  +     +   LV
Sbjct: 196 ALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR-IHLLITEHGLDDTTTMSNALV 254

Query: 240 DMYAKC--GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           ++Y +C  G +D A +I   M E+ + AWN++I+G+  +G   EA   +  +  E +  D
Sbjct: 255 NVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVD 314

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + T  +VL +  S  ++   K +H+ +V+   +SD  + N+L + Y KCG +E+A +IF 
Sbjct: 315 KVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFD 374

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                  V+   M+ AYAQ G  EE LKL  +M+   +  +     S+L++C++     +
Sbjct: 375 SMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAE 434

Query: 418 GKQVHVHIIKF--GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGG 474
           G Q + H +    G    T     LV++  + G + +A++  S++P    IV+W++++G 
Sbjct: 435 GCQ-YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493

Query: 475 LAQH---GRGKEA 484
              H    RGK A
Sbjct: 494 CRVHKDLDRGKLA 506


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 295/787 (37%), Positives = 435/787 (55%), Gaps = 55/787 (6%)

Query: 40  YAKCGNFIDSRRLFDA-IPERSVVSW-NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEF 97
           Y +CG   ++  L    IP  S V W N+L    V    L++ + F+ +M   G  P+ +
Sbjct: 69  YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +   ++ AC        G  +H      G  S++F  N++V MY + G L+DA  +F ++
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188

Query: 158 ---EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK---SSEINPNMFTYTSALKACAGME 211
              +  DIVSWN+++A  V    +  AL++  +M    S ++ P+  T  + L ACA + 
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
             + G+Q+H   ++  +  D  VG  LV MYAKC  M+EA  +F  + +K++++WN +++
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVT 308

Query: 272 GHLQNGGDMEAASLFPWMYRE-------------------GVGFDQ-------------- 298
           G+ Q G    A SLF  M  E                   G GF+               
Sbjct: 309 GYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEP 368

Query: 299 --TTLSTVLKSVASFQAIGVCKQVHALSVKTAF-------ESDDYIVNSLIDAYGKCGHV 349
              TL+++L   AS  A+   KQ HA  +K          E D  ++N LID Y KC   
Sbjct: 369 NVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSY 428

Query: 350 EDAVKIFK--ESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSL 405
             A  IF   E    ++V  T MI  YAQ G   +ALKL+ ++  Q   + P++F  S  
Sbjct: 429 RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCA 488

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDT-FAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           L ACA L     G+Q+H + ++    S+  + GN L++MY+K G ID A   F  +  R 
Sbjct: 489 LMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN 548

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VSW++++ G   HGRG+EAL +F QM + G   + IT + VL AC+H+G+V +   +F 
Sbjct: 549 VVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFH 608

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
            M K FGI P  EHYACM+D+LGRAG+  EAMEL+  M  +  A VW ALL A+RI+ N+
Sbjct: 609 DMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANI 668

Query: 585 EVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEV 644
           E+G++AA  L  +  E   ++ LLSN+YA+A  W +VA++R  MK   ++K PG SWI+ 
Sbjct: 669 ELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQG 728

Query: 645 KDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHS 704
           K    TF VGDRSH  S++IY  L ++   +   GYVP     LHDV++ EK  LL+ HS
Sbjct: 729 KKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHS 788

Query: 705 EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
           EKLAVA+G++ T PG  IR+ KNLRIC DCH++  +IS I+  EI++RD +RFHHF+ GS
Sbjct: 789 EKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGS 848

Query: 765 CSCGGYW 771
           CSC  YW
Sbjct: 849 CSCRSYW 855



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/507 (31%), Positives = 246/507 (48%), Gaps = 54/507 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC     L  G  VH IV   G  S+ F+ NS+V MY +CG   D+ ++FD + ER 
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192

Query: 61  V---VSWNSLFSCYVHCDFLEEAVCFFKEM---VLSGIRPNEFSLSSMINACAGSGDSLL 114
           +   VSWNS+ + YV       A+     M       +RP+  +L +++ ACA       
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN-------- 166
           G+++HG+S++ G   D+F  NALV MYAK   + +A  VF+ I+  D+VSWN        
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312

Query: 167 ---------------------------AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
                                      AVIAG     H   AL +F+QM+   + PN+ T
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372

Query: 200 YTSALKACAGMELKELGRQLHCSLIK-------MEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             S L  CA +     G+Q H  +IK        + + D +V  GL+DMYAKC S   AR
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432

Query: 253 MIFHLM--PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT--TLSTVLKSV 308
            IF  +   +KN++ W ++I G+ Q+G   +A  LF  ++++         TLS  L + 
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492

Query: 309 ASFQAIGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
           A    + + +Q+HA +++   ES+  Y+ N LID Y K G ++ A  +F      ++V+ 
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSW 552

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK-QVHVHII 426
           TS++T Y   G GEEAL L+ +MQ      D      +L AC++    +QG    H  + 
Sbjct: 553 TSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVK 612

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            FG          +V++  + G +++A
Sbjct: 613 GFGITPGAEHYACMVDLLGRAGRLNEA 639



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 340 IDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           + AY +CG   +AV + +    S   +    ++I    + GL ++ L  Y +MQ     P
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D +    +L AC  + +   G  VH  +   G  S+ F  NS+V MY +CG++DDA + F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185

Query: 458 SEIPDR---GIVSWSAMIGGLAQHGRGKEALQM---FGQMLEDGVLPNHITLVSVLCAC 510
            E+ +R    IVSW++++    Q G+ + AL++    G      + P+ ITLV++L AC
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPAC 244


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/776 (35%), Positives = 449/776 (57%), Gaps = 10/776 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D  +G  V+  ++  GF+SD +V N+LV MY++ G    +R++FD +P R 
Sbjct: 112 VIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRD 171

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNSL S Y    + EEA+  + E+  S I P+ F++SS++ A A       G+ +HG
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHG 231

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K G +S     N L+ MY K     DA  VF ++   D V++N +I G +  E  + 
Sbjct: 232 FTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEE 291

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++K+F +    +  P++ T TS L AC  +    L + ++  +++     +  V   L+D
Sbjct: 292 SVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILID 350

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG M  AR +F+ M  K+ ++WN +ISG++Q+G  MEA  LF  M       D  T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              ++        +   K +H+  +K+    D  + N+LID Y KCG V D++KIF    
Sbjct: 411 YLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG 470

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            +D V   ++I+A  +FG     L++  +M+  ++ PD       L  CA+L+A   GK+
Sbjct: 471 TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKE 530

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +++FG+ S+   GN+L+ MY+KCG ++ + R F  +  R +V+W+ MI     +G 
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGE 590

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++AL+ F  M + G++P+ +  ++++ AC+H+GLV +    FE M+  + I PM EHYA
Sbjct: 591 GEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYA 650

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R+ K  +A E +  MP + +AS+W ++L A R   ++E  +  +  +  + P+
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
                +L SN YA+   WD V+ +R+ ++D  +KK PG SWIE+  KV+ F  GD S  +
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQ 770

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES-----EKEQLLYHHSEKLAVAFGLIA 715
           S+ I+  L+ +  L+ K GY+P    D  +V ++     EK +L+  HSE+LA+AFGL+ 
Sbjct: 771 SEAIHKSLEILYSLMAKEGYIP----DSREVSQNLEEEEEKRRLICGHSERLAIAFGLLN 826

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG  ++V KNLR+C DCH   + ISKIV REI+VRD NRFH F++G CSC   W
Sbjct: 827 TEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 167/617 (27%), Positives = 314/617 (50%), Gaps = 15/617 (2%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PERSV 61
           +A +S  +L    ++H +V+  G D  +F +  L+  Y+       S  +F  + P ++V
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNV 71

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
             WNS+   +    +  +A+ F+ ++  S + P++++  S+I ACAG  D+ +G  ++  
Sbjct: 72  YIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQ 131

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +++G++SD++  NALVDMY+++G L  A  VF ++   D+VSWN++I+G   H + + A
Sbjct: 132 ILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+++ ++++S I P+ FT +S L A A + + + G+ LH   +K  + S  +V  GL+ M
Sbjct: 192 LEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAM 251

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K     +AR +F  M  ++ + +N +I G+L+     E+  +F     +    D  T+
Sbjct: 252 YLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF-LENLDQFKPDILTV 310

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           ++VL +    + + + K ++   ++  F  +  + N LID Y KCG +  A  +F     
Sbjct: 311 TSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMEC 370

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D V+  S+I+ Y Q G   EA+KL+  M   E   D      L++    L+  + GK +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGL 430

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H + IK G   D    N+L++MYAKCG + D+ + F+ +     V+W+ +I    + G  
Sbjct: 431 HSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDF 490

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA-KHHFESMEKKFGIQPMQEHYA 540
              LQ+  QM ++ V+P+  T +  L  C  A L A+           +FG +   +   
Sbjct: 491 ATGLQVTTQMRKNKVVPDMATFLVTLPMC--ASLAAKRLGKEIHCCLLRFGYESELQIGN 548

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            +I++  + G  + +  + + M  + +   W  ++ A  +Y     G+ A E    ++ E
Sbjct: 549 ALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALESF--VDME 602

Query: 601 KS----STHVLLSNIYA 613
           KS     + V ++ IYA
Sbjct: 603 KSGIVPDSVVFIALIYA 619


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/866 (34%), Positives = 452/866 (52%), Gaps = 107/866 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL--------- 52
           L++C S+  L     +HG +V  G  S  F+ N+L+  Y  CG   D+RRL         
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70

Query: 53  -----------------------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                  FD +P R V SWN+L S Y       + +  F  M  
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130

Query: 90  SGIR-PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           SG   PN F+   ++ +C   G   L  ++ G   K  +  D     ALVDM+ + G ++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190

Query: 149 DAVAVFKDIEHP-------------------------------DIVSWNAVIAGCVLHEH 177
            A  +F  IE P                               D+VSWN +IA       
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL L  +M    +  +  TYTS+L ACA +     G+QLH  +I+   + DP V   
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+++YAKCGS  EA+ +F+ + ++N ++W ++I G LQ     ++  LF  M  E +  D
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q  L+T++    +   + + +Q+H+L +K+       + NSLI  Y KCG +++A  +F 
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 430

Query: 358 ESSAVDLVACTSMITAYAQFG-----------------------LG--------EEALKL 386
             S  D+V+ TSMITAY+Q G                       LG        E+ LK+
Sbjct: 431 SMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKM 490

Query: 387 YLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           Y  M   +++ PD     +L   CA++ A + G Q+  H +K G + +    N+ + MY+
Sbjct: 491 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 550

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG I +A + F  +  + +VSW+AMI G +QHG GK+A + F  ML  G  P++I+ V+
Sbjct: 551 KCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 610

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL  C+H+GLV E K +F+ M +  GI P  EH++CM+D+LGRAG   EA +L+D MP +
Sbjct: 611 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 670

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A VWGALL A +I+ N E+ + AA+ +F ++   S +++LL+ IY+ AG  D+ A+VR
Sbjct: 671 PTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVR 730

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  +KK PG SW+EV++KV+ F   D SH +   I  KLDE+ + +   GYV    
Sbjct: 731 KLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVR--- 787

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
                  ES + ++  HHSEKLAVAFG+++ P    I + KNLRIC DCHT  + IS + 
Sbjct: 788 ------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVT 839

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            RE ++RD  RFHHF++GSCSCG YW
Sbjct: 840 DREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 192/469 (40%), Gaps = 95/469 (20%)

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM--------- 253
           AL++C         R LH  L+ + + S   +   L+  Y  CG++ +AR          
Sbjct: 10  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69

Query: 254 -----------------------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                                  +F  MP +++ +WN ++SG+ Q    ++    F  M+
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 291 REGVGFDQT-TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           R G       T   V+KS  +     +  Q+  L  K  F  D  +  +L+D + +CG+V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 350 -------------------------------EDAVKIFKESSAVDLVACTSMITAYAQFG 378
                                          + A++ F++ +  D+V+   MI A +Q G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              EAL L +EM  + +  DS   +S L ACA L +   GKQ+H  +I+     D +  +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +L+ +YAKCGS  +A R F+ + DR  VSW+ +IGG  Q+    +++++F QM  + +  
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 499 NHITLVSVLCAC-NHAGLVAEAKHHFESMEK-------------------------KFGI 532
           +   L +++  C N   L    + H   ++                          +F  
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429

Query: 533 QPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             M E     +  MI    + G   +A E  D M  + NA  W A+LGA
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR-NAITWNAMLGA 477



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 34/313 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           ++  C ++ DL LG Q+H + + +G +    V+NSL+ +YAKC                 
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                         GN I +R  FD +  R+ ++WN++   Y+     E+ +  +  M+ 
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              + P+  +  ++   CA  G + LG +I G+++K G   ++  ANA + MY+K G + 
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 556

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +   D+VSWNA+I G   H     A K F  M S    P+  +Y + L  C+
Sbjct: 557 EAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS 616

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMPEKNLI-AW 266
              L + G+     + ++   S  +     +VD+  + G + EA+ +   MP K     W
Sbjct: 617 HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 676

Query: 267 NIVISGHLQNGGD 279
             ++S    +G D
Sbjct: 677 GALLSACKIHGND 689



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 149/367 (40%), Gaps = 72/367 (19%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ES 359
           L+  L+S  S  A+   + +H   V     S  ++ N+L+ AY  CG + DA ++ + + 
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN----------------------- 396
              +++    M+  YA+ G   +A +L+  M  R++                        
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 397 ---------PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
                    P++F    ++ +C  L   E   Q+     KF F  D     +LV+M+ +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 448 GSIDDADRAFSEI-------------------------------PDRGIVSWSAMIGGLA 476
           G +D A R FS+I                                +R +VSW+ MI  L+
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPM 535
           Q GR +EAL +  +M   GV  +  T  S L AC     +   K  H + +     I P 
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY----KNVEVGQHAA 591
               + +I++  + G F+EA  + +++    N+  W  L+G +  Y    K+VE+     
Sbjct: 307 VA--SALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYECFSKSVELFNQMR 363

Query: 592 EMLFAIE 598
             L AI+
Sbjct: 364 AELMAID 370


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/776 (36%), Positives = 453/776 (58%), Gaps = 6/776 (0%)

Query: 1   VLKACTSKKDLFL-GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC++  +L   G ++HG++  T  +SD +V+ +L+ MY KC +  D+R++FD I  +
Sbjct: 105 VLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHK 164

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VV WN++ + Y   D  E+A+  F  M+L G++    +   +++AC+   D  + + + 
Sbjct: 165 RVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVK 224

Query: 120 GYSIKLGYDS--DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
               +  +D   D   A ALV+ Y   G+LE A   F      +++   A+I      E 
Sbjct: 225 LCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRER 283

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            D AL+LF+ M    +  +     + L AC+G    E GR +H  + ++        G  
Sbjct: 284 WDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNA 343

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++MY KCGS++EA  +F  M  +++I+WN +I+ H Q+    EA  L   M  +GV  D
Sbjct: 344 LINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKAD 403

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + +    L   A+ +A+   + +H+  V++  ++D  + N+++D YG C   +DA ++F+
Sbjct: 404 KISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFR 463

Query: 358 ESSAVDLVACTSMITAYA-QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                D V+  +MITAYA Q  L  EAL L+ +MQ     PD     + L+ACA  ++  
Sbjct: 464 AMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLA 523

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +GK +H  I + G  S+    N+++NMYAK G++  A + F ++P   ++SW+ MI   A
Sbjct: 524 EGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFA 583

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF-GIQPM 535
           QHG   + L+ F +M  +G LPN +T VSV+ AC+H GLV +    F S+   F  I P 
Sbjct: 584 QHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPR 643

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D++ RAGK   A + +   P + +  +   +LGA++++K+VE  + +AE L 
Sbjct: 644 AEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLM 703

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            + P++S+ +V+LSN+Y   G  D  AK+RR M +  ++KEP  S I VK +V+ F  GD
Sbjct: 704 ELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGD 763

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            ++AR+ EI  +L+ +S  + KAGY P     LHDV + +K++LL +HSEKLA+AFGLI+
Sbjct: 764 TTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLIS 823

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG ++R+ KNLR+C DCHT+ +FISKI  REI+VRD +RFHHF NG+CSCG YW
Sbjct: 824 TAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 281/586 (47%), Gaps = 17/586 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L      + L LG +VH  +  +  D   F+ + LV MY  CG+ ID++  FD +P + 
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
            ++W  L   +      E+A+  F+ M L G+ P   +  +++ AC+   + L  GR+IH
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G       +SD + +  L+ MY K  ++EDA  VF  I H  +V WNA+I      +H++
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS-------DP 232
            A+++F  M    +     T+   L AC+ ++  E+ +     L+K+ ++        D 
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK-----LVKLCVEEREHDHLHDS 238

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                LV+ Y  CG +++A   F       LI    +I+ + Q     EA  LF  M  E
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           GV  D+     VL + +  + +   + +H    +  F+      N+LI+ YGKCG +E+A
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           V++F+     D+++  ++I A+ Q     EAL L   MQ   +  D     + L  CA  
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATS 417

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A  +G+ +H  I++ G  +D    N++++MY  C S DDA R F  +  R  VSW+AMI
Sbjct: 418 EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMI 477

Query: 473 GGLAQHGR-GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
              A   R   EAL +F QM   G +P+ I+ V+ L AC     +AE K   + + ++ G
Sbjct: 478 TAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRI-RETG 536

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           ++        ++++  ++G    A ++   MP     S W  ++ A
Sbjct: 537 LESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVIS-WNGMISA 581



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 245/513 (47%), Gaps = 25/513 (4%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           + +++  A S    LG+++H    K   D   F  + LV MY   G+L DA A F  +  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC-AGMELKELGRQ 218
            D ++W  +I        ++ AL LF+ M+   + P    + + L AC A  EL E GR+
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  L    ++SD  V   L+ MY KC S+++AR +F  +  K ++ WN +I+ + Q   
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE--SDDYIV 336
             +A  +F  M  EGV  ++ T   VL + +  + + V K V     +   +   D    
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            +L++ YG CG +E A + F     ++L+  T+MIT Y Q    +EAL+L+  M    + 
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSRHR-LELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            D   C ++LNAC+     E+G+ +H  + +  F     AGN+L+NMY KCGS+++A   
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +  R ++SW+ +I    QH +  EAL +   M  DGV  + I+ V+ L  C  +  +
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEAL 420

Query: 517 AEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           A+ +  H   +E       M ++   ++D+ G      +A  +   M  +   S W A++
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDN--AILDMYGSCKSTDDASRVFRAMKVRDQVS-WNAMI 477

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
            A                 +A +P  SS  +LL
Sbjct: 478 TA-----------------YAAQPRLSSEALLL 493



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 187/383 (48%), Gaps = 10/383 (2%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   L   A     +LG+++H  + K  +   P +G  LV MY  CGS+ +A+  F  MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV-ASFQAIGVCK 318
            ++ + W  +I  H Q G   +A  LF  M  EGV         VL +  A  + +   +
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H +   TA ESD Y+  +L+  YGKC  VEDA K+F       +V   +MITAYAQ  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH--VHIIKFGFMSDTFA 436
             E+A++++  M    +  +      +L+AC+ L   E  K V   V   +   + D+  
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             +LVN Y  CG ++ A RAFS      I++ +AMI    Q  R  EAL++F  ML +GV
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 497 LPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
             + I  ++VL AC+    + E +  H F   E +F       +   +I++ G+ G  +E
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMR-EIRFDRHVNAGN--ALINMYGKCGSLEE 356

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A+E+  +M  +   S W  ++ A
Sbjct: 357 AVEVFRSMQHRDVIS-WNTIIAA 378


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 284/790 (35%), Positives = 430/790 (54%), Gaps = 50/790 (6%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           + + L+  Y   G    +  L    P  +  V  WNSL   Y       + +  F  M  
Sbjct: 61  LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
               P+ ++   +  AC        G   H  S+  G+ S++F  NALV MY++  +L D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACA 208
           A  VF ++   D+VSWN++I           AL++F +M +     P+  T  + L  CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +    LG+QLHC  +  E+  +  VG  LVDMYAKCG MDEA  +F  M  K++++WN 
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVCKQ----- 319
           +++G+ Q G   +A  LF  M  E +  D  T S  +   A     ++A+GVC+Q     
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360

Query: 320 --------------------------VHALSVKTAFE-------SDDYIVNSLIDAYGKC 346
                                     +H  ++K   +        ++ ++N LID Y KC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420

Query: 347 GHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVC 402
             V+ A  +F   S    D+V  T MI  Y+Q G   +AL+L  EM  +D +  P++F  
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           S  L ACA+L+A   GKQ+H + ++    +   F  N L++MYAKCGSI DA   F  + 
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
            +  V+W++++ G   HG G+EAL +F +M   G   + +TL+ VL AC+H+G++ +   
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           +F  M+  FG+ P  EHYAC++D+LGRAG+   A+ L++ MP +    VW A L   RI+
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660

Query: 582 KNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
             VE+G++AAE +  +      ++ LLSN+YA+AG W +V ++R  M+   +KK PG SW
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720

Query: 642 IEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY 701
           +E      TF VGD++H  +KEIY  L +    +   GYVP     LHDV++ EK+ LL+
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLF 780

Query: 702 HHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFR 761
            HSEKLA+A+G++ TP GA IR+ KNLR+C DCHT+F ++S+I+  +II+RD +RFHHF+
Sbjct: 781 EHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFK 840

Query: 762 NGSCSCGGYW 771
           NGSCSC GYW
Sbjct: 841 NGSCSCKGYW 850



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 257/530 (48%), Gaps = 50/530 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC     +  G   H + + TGF S+ FV N+LV MY++C +  D+R++FD +    
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSWNS+   Y      + A+  F  M    G RP+  +L +++  CA  G   LG+++H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            +++      +MF  N LVDMYAK G +++A  VF ++   D+VSWNA++AG       +
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312

Query: 180 WALKLFQ-----------------------------------QMKSSEINPNMFTYTSAL 204
            A++LF+                                   QM SS I PN  T  S L
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372

Query: 205 KACAGMELKELGRQLHCSLIKMEIK-------SDPIVGVGLVDMYAKCGSMDEARMIF-H 256
             CA +     G+++HC  IK  I         + +V   L+DMYAKC  +D AR +F  
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432

Query: 257 LMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQA 313
           L P E++++ W ++I G+ Q+G   +A  L   M+ E      +  T+S  L + AS  A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492

Query: 314 IGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           + + KQ+HA +++    +   ++ N LID Y KCG + DA  +F    A + V  TS++T
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFM 431
            Y   G GEEAL ++ EM+      D      +L AC++    +QG +    +   FG  
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR 480
                   LV++  + G ++ A R   E+P +   V W A +     HG+
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 300/866 (34%), Positives = 452/866 (52%), Gaps = 107/866 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL--------- 52
           L++C S+  L     +HG +V  G  S  F+ N+L+  Y  CG   D+RRL         
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70

Query: 53  -----------------------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                  FD +P R V SWN+L S Y       + +  F  M  
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130

Query: 90  SGIR-PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           SG   PN F+   ++ +C   G   L  ++ G   K  +  D     ALVDM+ + G ++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190

Query: 149 DAVAVFKDIEHP-------------------------------DIVSWNAVIAGCVLHEH 177
            A  +F  IE P                               D+VSWN +IA       
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL L  +M    +  +  TYTS+L ACA +     G+QLH  +I+   + DP V   
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+++YAKCGS  EA+ +F+ + ++N ++W ++I G LQ     ++  LF  M  E +  D
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q  L+T++    +   + + +Q+H+L +K+       + NSLI  Y KCG +++A  +F 
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 430

Query: 358 ESSAVDLVACTSMITAYAQFG-----------------------LG--------EEALKL 386
             S  D+V+ TSMITAY+Q G                       LG        E+ LK+
Sbjct: 431 SMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKM 490

Query: 387 YLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           Y  M   +++ PD     +L   CA++ A + G Q+  H +K G + +    N+ + MY+
Sbjct: 491 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 550

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG I +A + F  +  + +VSW+AMI G +QHG GK+A + F  ML  G  P++I+ V+
Sbjct: 551 KCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 610

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL  C+H+GLV E K +F+ M +  GI P  EH++CM+D+LGRAG   EA +L+D MP +
Sbjct: 611 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 670

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A VWGALL A +I+ N E+ + AA+ +F ++   S +++LL+ IY+ AG  D+ A+VR
Sbjct: 671 PTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVR 730

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  +KK PG SW+EV++KV+ F   D SH +   I  K+DE+ + +   GYV    
Sbjct: 731 KLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR--- 787

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
                  ES + ++  HHSEKLAVAFG+++ P    I + KNLRIC DCHT  + IS + 
Sbjct: 788 ------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVT 839

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            RE ++RD  RFHHF++GSCSCG YW
Sbjct: 840 DREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 192/469 (40%), Gaps = 95/469 (20%)

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM--------- 253
           AL++C         R LH  L+ + + S   +   L+  Y  CG++ +AR          
Sbjct: 10  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69

Query: 254 -----------------------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                                  +F  MP +++ +WN ++SG+ Q    ++    F  M+
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 291 REGVGFDQT-TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           R G       T   V+KS  +     +  Q+  L  K  F  D  +  +L+D + +CG+V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 350 -------------------------------EDAVKIFKESSAVDLVACTSMITAYAQFG 378
                                          + A++ F++ +  D+V+   MI A +Q G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              EAL L +EM  + +  DS   +S L ACA L +   GKQ+H  +I+     D +  +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +L+ +YAKCGS  +A R F+ + DR  VSW+ +IGG  Q+    +++++F QM  + +  
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 499 NHITLVSVLCAC-NHAGLVAEAKHHFESMEK-------------------------KFGI 532
           +   L +++  C N   L    + H   ++                          +F  
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429

Query: 533 QPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             M E     +  MI    + G   +A E  D M  + NA  W A+LGA
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR-NAITWNAMLGA 477



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 34/313 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           ++  C ++ DL LG Q+H + + +G +    V+NSL+ +YAKC                 
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                         GN I +R  FD +  R+ ++WN++   Y+     E+ +  +  M+ 
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              + P+  +  ++   CA  G + LG +I G+++K G   ++  ANA + MY+K G + 
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 556

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +   D+VSWNA+I G   H     A K F  M S    P+  +Y + L  C+
Sbjct: 557 EAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS 616

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMPEKNLI-AW 266
              L + G+     + ++   S  +     +VD+  + G + EA+ +   MP K     W
Sbjct: 617 HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 676

Query: 267 NIVISGHLQNGGD 279
             ++S    +G D
Sbjct: 677 GALLSACKIHGND 689



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 149/367 (40%), Gaps = 72/367 (19%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ES 359
           L+  L+S  S  A+   + +H   V     S  ++ N+L+ AY  CG + DA ++ + + 
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN----------------------- 396
              +++    M+  YA+ G   +A +L+  M  R++                        
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 397 ---------PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
                    P++F    ++ +C  L   E   Q+     KF F  D     +LV+M+ +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 448 GSIDDADRAFSEI-------------------------------PDRGIVSWSAMIGGLA 476
           G +D A R FS+I                                +R +VSW+ MI  L+
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPM 535
           Q GR +EAL +  +M   GV  +  T  S L AC     +   K  H + +     I P 
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY----KNVEVGQHAA 591
               + +I++  + G F+EA  + +++    N+  W  L+G +  Y    K+VE+     
Sbjct: 307 VA--SALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYECFSKSVELFNQMR 363

Query: 592 EMLFAIE 598
             L AI+
Sbjct: 364 AELMAID 370


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/758 (36%), Positives = 421/758 (55%), Gaps = 5/758 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q H  ++  GF +D  +   L    +  G    +R +F ++    V  +N L   +   +
Sbjct: 38  QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 76  FLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               ++  F  +  S  ++PN  + +  I+A +G  D   GR IHG ++  G DS++   
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEI 193
           + +V MY K   +EDA  VF  +   D + WN +I+G   +E    ++++F+ +   S  
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             +  T    L A A ++   LG Q+H    K    S   V  G + +Y+KCG +     
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F    + +++A+N +I G+  NG    + SLF  +   G     +TL +++        
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           I     +H   +K+ F S   +  +L   Y K   +E A K+F ES    L +  +MI+ 
Sbjct: 338 I---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q GL E+A+ L+ EMQ  E +P+    + +L+ACA L A   GK VH  +    F S 
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +   +L+ MYAKCGSI +A R F  +  +  V+W+ MI G   HG+G+EAL +F +ML 
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G+ P  +T + VL AC+HAGLV E    F SM  ++G +P  +HYACM+DILGRAG  Q
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A++ ++ M  +  +SVW  LLGA RI+K+  + +  +E LF ++P+    HVLLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           +   +   A VR+  K  KL K PG + IE+ +  + FT GD+SH + KEIY KL+++  
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            + +AGY P  E  LHDVEE E+E ++  HSE+LA+AFGLIAT PG  IR+ KNLR+C+D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CHT  + ISKI  R I+VRD NRFHHF++G CSCG YW
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 241/482 (50%), Gaps = 10/482 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + A +  +D   G  +HG  V  G DS+  + +++V MY K     D+R++FD +PE+  
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + WN++ S Y   +   E++  F++++  S  R +  +L  ++ A A   +  LG +IH 
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + K G  S  +     + +Y+K G ++   A+F++   PDIV++NA+I G   +   + 
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L LF+++  S       T  S +     + L      +H   +K    S   V   L  
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTT 362

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+K   ++ AR +F   PEK+L +WN +ISG+ QNG   +A SLF  M +     +  T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++ +L + A   A+ + K VH L   T FES  Y+  +LI  Y KCG + +A ++F   +
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQG 418
             + V   +MI+ Y   G G+EAL ++ EM +  I P   +F+C  +L AC++    ++G
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC--VLYACSHAGLVKEG 540

Query: 419 KQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
            ++   +I ++GF         +V++  + G +  A +    +  + G   W  ++G   
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600

Query: 477 QH 478
            H
Sbjct: 601 IH 602



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 201/409 (49%), Gaps = 36/409 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A    ++L LG+Q+H +   TG  S ++V    + +Y+KCG       LF    +  
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V++N++   Y      E ++  FKE++LSG R    +L S++     SG  +L   IHG
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHG 343

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K  + S    + AL  +Y+K+  +E A  +F +     + SWNA+I+G   +   + 
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF++M+ SE +PN  T T  L ACA +    LG+ +H  +   + +S   V   L+ 
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ EAR +F LM +KN + WN +ISG+  +G   EA ++F  M   G+     T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL + +           HA  VK      D I NS+I  YG     E +VK +    
Sbjct: 524 FLCVLYACS-----------HAGLVKEG----DEIFNSMIHRYG----FEPSVKHY---- 560

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
                AC  M+    + G  + AL+    M    I P S V  +LL AC
Sbjct: 561 -----AC--MVDILGRAGHLQRALQFIEAMS---IEPGSSVWETLLGAC 599



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L LG  VH +V  T F+S  +V+ +L+ MYAKCG+  ++RRLFD + +++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS-----GDSLLG 115
            V+WN++ S Y      +EA+  F EM+ SGI P   +   ++ AC+ +     GD +  
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
             IH Y    G++  +     +VD+  + G+L+ A+   + +   P    W  ++  C +
Sbjct: 546 SMIHRY----GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTY 200
           H+  + A  + +++   E++P+   Y
Sbjct: 602 HKDTNLARTVSEKL--FELDPDNVGY 625


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 284/745 (38%), Positives = 434/745 (58%), Gaps = 34/745 (4%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           +Y+      DS RLF+ +     ++W S+  CY       +++  F  M+ SG+ P+   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED-------AV 151
             S++ ACA   D  LG  +HGY I++G D D+++ NAL++MY+K+  L+        A 
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 152 AVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
            V  ++ E    V   +V+ G              Q  K S+I    F Y  +   C   
Sbjct: 171 QVLDEMTERTRSVRTASVLVGN-------------QGRKVSDIEA--FNYDVS---CRSR 212

Query: 211 ELK----ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           E +    E+  +      +ME  +   +G  + D+ +   S+D  R IF +MPEK+L++W
Sbjct: 213 EFEAQVLEIDYKPRSEYREMEACN---LGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSW 268

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I+G+ +NG   E  ++   M    +  D  TLS+VL  +A    I   K++H  S++
Sbjct: 269 NTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIR 328

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              +++ Y+ +SLID Y KC  V D+ ++F   +  D ++  S+I    Q GL +E LK 
Sbjct: 329 QGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKF 388

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + +M   +I P S+  SS++ ACA+L+    GKQ+H +I + GF  + F  +SLV+MYAK
Sbjct: 389 FRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK 448

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG+I  A + F  +  R +VSW+AMI G A HG   +A+++F QM  +G+ PN++  ++V
Sbjct: 449 CGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAV 508

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+HAGLV EA  +F SM   FGI P  EHYA + D+LGRAG+ +EA + +  MP   
Sbjct: 509 LTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGP 568

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
             SVW  LL A R++KNV++ +  A  +  ++P+ +  ++LL+NIY++A  W   AK R 
Sbjct: 569 TGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRA 628

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
            ++   ++K P  SWIEV++KVY F  GD SH   ++I   ++ + +L+ K GYVP    
Sbjct: 629 SLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSE 688

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
             HDVEE +K+ L+  HSE+LA+ FG+I TP G TIRV KNLR+C DCHT+ +FISKIV 
Sbjct: 689 VHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVG 748

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           REI+VRD +RFHHF+NG+CSCG YW
Sbjct: 749 REIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 130/208 (62%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL       D+  G ++HG  +  G D++ +VA+SL+ MYAKC   +DS R+F  + ER 
Sbjct: 306 VLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERD 365

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWNS+ +  V     +E + FF++M+++ I+P  +S SS++ ACA      LG+++HG
Sbjct: 366 GISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 425

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G+D ++F A++LVDMYAK GN+  A  +F  +   D+VSW A+I GC LH H   
Sbjct: 426 YITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALD 485

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACA 208
           A++LF+QMK+  I PN   + + L AC+
Sbjct: 486 AIELFEQMKTEGIEPNYVAFMAVLTACS 513



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 230/517 (44%), Gaps = 56/517 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR-------LF 53
           VLKAC    DL LG  +HG ++  G D D +  N+L+ MY+K      S R       + 
Sbjct: 114 VLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVL 173

Query: 54  DAIPER-------SVVSWNS--------LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           D + ER       SV+  N          F+  V C   E     F+  VL  I     S
Sbjct: 174 DEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSRE-----FEAQVLE-IDYKPRS 227

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
               + AC       LG++I   S  +  DS                       +F+ + 
Sbjct: 228 EYREMEACN------LGQQIKDISHSMSVDS--------------------VRKIFEMMP 261

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             D+VSWN +IAG   +      L + ++M  + + P+ FT +S L   A       G++
Sbjct: 262 EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKE 321

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H   I+  + ++  V   L+DMYAKC  + ++  +F L+ E++ I+WN +I+G +QNG 
Sbjct: 322 IHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGL 381

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             E    F  M    +     + S+++ + A    + + KQ+H    +  F+ + +I +S
Sbjct: 382 FDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 441

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D Y KCG++  A +IF      D+V+ T+MI   A  G   +A++L+ +M+   I P+
Sbjct: 442 LVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPN 501

Query: 399 SFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
                ++L AC++    ++  K  +   + FG         ++ ++  + G +++A    
Sbjct: 502 YVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 561

Query: 458 SEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE 493
             +P     S W+ ++     H     A ++  ++LE
Sbjct: 562 CGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILE 598



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 166/381 (43%), Gaps = 56/381 (14%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA-YGKCGHVEDAVKIF 356
           +  ++++L++  S ++    +Q+HA  +K  F++      SL+ + Y     + D++++F
Sbjct: 8   EALVNSLLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLF 65

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                   +A  S+I  Y   GL  ++L  ++ M    + PD  V  S+L ACA L    
Sbjct: 66  NTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLN 125

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR---AFSEIPD------RGIVS 467
            G+ +H +II+ G   D + GN+L+NMY+K   +  + R     S++ D      R + +
Sbjct: 126 LGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRT 185

Query: 468 WSAMIGGLAQHGRGKEALQMF------------GQMLEDGVLPNHITLVSVLCACNHAGL 515
            S ++G     GR    ++ F             Q+LE    P   +    + ACN    
Sbjct: 186 ASVLVG---NQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPR--SEYREMEACNLGQQ 240

Query: 516 VAEAKHHF--ESMEKKFGIQPMQEHYACMIDILG--RAGKFQEAMELVDTM---PFQANA 568
           + +  H    +S+ K F + P ++  +    I G  R G + E + +V  M     + ++
Sbjct: 241 IKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300

Query: 569 SVWGALLGAARIYKNVEVGQ----HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
               ++L    I +NV++ +    H   +   ++ E          +Y ++ + D  AK 
Sbjct: 301 FTLSSVL--PLIAENVDISKGKEIHGCSIRQGLDAE----------VYVASSLIDMYAKC 348

Query: 625 RRFMKDNK----LKKEPGMSW 641
            R +   +    L +  G+SW
Sbjct: 349 TRVVDSYRVFTLLTERDGISW 369



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/319 (18%), Positives = 133/319 (41%), Gaps = 37/319 (11%)

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           S L+    ++ +   +QLH  ++K +  S       L+ +Y+    + ++  +F+ +   
Sbjct: 13  SLLRNPLSIKSRSQAQQLHAQVLKFQASSL-CNLSLLLSIYSHINLLHDSLRLFNTLHFP 71

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
             +AW  VI  +  +G   ++   F  M   G+  D     +VLK+ A    + + + +H
Sbjct: 72  PALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLH 131

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
              ++   + D Y  N+L++ Y K       ++  K+S                +  LG 
Sbjct: 132 GYIIRVGLDFDLYTGNALMNMYSK-------LRFLKKS---------------GRQRLGA 169

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYE-----QGKQVHVHIIKFGF------ 430
             +   +  + R +   S +  +     +++ A+      + ++    +++  +      
Sbjct: 170 SQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEY 229

Query: 431 --MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
             M     G  + ++ +   S+D   + F  +P++ +VSW+ +I G A++G   E L M 
Sbjct: 230 REMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMV 288

Query: 489 GQMLEDGVLPNHITLVSVL 507
            +M    + P+  TL SVL
Sbjct: 289 REMGGANLKPDSFTLSSVL 307


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 285/769 (37%), Positives = 436/769 (56%), Gaps = 84/769 (10%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           +N  +  + + G   D+ RLF A+P RS  ++N++ + Y     L  A   F+ +     
Sbjct: 41  SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP---- 96

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKI---------------------HG------YSIKL 125
           RP+ +S +++++A A S      R +                     HG      +   L
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
             + D  S N ++  Y + G +E+A  +F      D++SWNA+++G V       A +LF
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216

Query: 186 QQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
            +M   ++ + N+     A +     ++ E  R    + ++     D      +V  YA+
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRG----DMVEARRLFDAAPVR-----DVFTWTAVVSGYAQ 267

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G ++EAR +F  MPE+N ++WN +++ ++Q     EA  LF  M               
Sbjct: 268 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM--------------P 313

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            ++VAS+                         N+++  Y + G +E+A  +F      D 
Sbjct: 314 CRNVASW-------------------------NTMLTGYAQAGMLEEAKAVFDTMPQKDA 348

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVCSSLLNACANLSAYEQGKQVH 422
           V+  +M+ AY+Q G  EE L+L++EM      +N  +F C  +L+ CA+++A E G Q+H
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLH 406

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
             +I+ G+    F GN+L+ MY KCG+++DA  AF E+ +R +VSW+ MI G A+HG GK
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK 466

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EAL++F  M      P+ ITLV VL AC+H+GLV +   +F SM   FG+    EHY CM
Sbjct: 467 EALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCM 526

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           ID+LGRAG+  EA +L+  MPF+ ++++WGALLGA+RI++N E+G+ AAE +F +EPE +
Sbjct: 527 IDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENA 586

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
             +VLLSNIYAS+G W +  K+R  M++  +KK PG SWIEV++KV+TF+ GD  H   +
Sbjct: 587 GMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKE 646

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           +IYA L+++   + KAGYV   +  LHDVEE EKE +L +HSEKLAVA+G++  PPG  I
Sbjct: 647 KIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPI 706

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RV KNLR+C DCH +F++IS I  R I++RD NRFHHFR GSCSCG YW
Sbjct: 707 RVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 209/469 (44%), Gaps = 55/469 (11%)

Query: 18  HGIVVFTG--FD----SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           HG+V      FD     D    N ++  Y + G   ++R LF++  E  V+SWN+L S Y
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 203

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V    + EA   F  M    +     S + M++  A  GD +  R++           D+
Sbjct: 204 VQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRL----FDAAPVRDV 255

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F+  A+V  YA+ G LE+A  VF  +   + VSWNA++A  +     D A +LF  M   
Sbjct: 256 FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 315

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
               N+ ++ + L                                     YA+ G ++EA
Sbjct: 316 ----NVASWNTMLTG-----------------------------------YAQAGMLEEA 336

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           + +F  MP+K+ ++W  +++ + Q G   E   LF  M R G   +++  + VL + A  
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+    Q+H   ++  +    ++ N+L+  Y KCG++EDA   F+E    D+V+  +MI
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGF 430
             YA+ G G+EAL+++  M+     PD      +L AC++    E+G      +   FG 
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            +       ++++  + G + +A     ++P +     W A++G    H
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/472 (21%), Positives = 202/472 (42%), Gaps = 68/472 (14%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++  +N  +  + + G + DA  +F  +      ++NA++AG   +     A  LF+ 
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +      P+ ++Y + L A A        R L     +M ++      V ++  +A  G 
Sbjct: 95  IP----RPDNYSYNTLLHALAVSSSLADARGL---FDEMPVRDSVTYNV-MISSHANHGL 146

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +  AR  F L PEK+ ++WN +++ +++NG   EA  LF         +D  + + ++  
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMSG 202

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
              +  +   +++           D    N ++  Y + G + +A ++F  +   D+   
Sbjct: 203 YVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTW 258

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T++++ YAQ G+ EEA +++  M +R          + ++  A ++AY Q + +      
Sbjct: 259 TAVVSGYAQNGMLEEARRVFDAMPER----------NAVSWNAMVAAYIQRRMMDEAKEL 308

Query: 428 FGFMS--DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           F  M   +  + N+++  YA+ G +++A   F  +P +  VSW+AM+   +Q G  +E L
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACN-----------HAGLV------------------ 516
           Q+F +M   G   N      VL  C            H  L+                  
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428

Query: 517 ------AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
                  +A++ FE ME++  +      +  MI    R G  +EA+E+ D M
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVS-----WNTMIAGYARHGFGKEALEIFDMM 475



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 7/214 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L  G+Q+HG ++  G+    FV N+L+ MY KCGN  D+R  F+ + ER 
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 448

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VVSWN++ + Y    F +EA+  F  M  +  +P++ +L  ++ AC+ SG  L+ + I +
Sbjct: 449 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG--LVEKGISY 506

Query: 120 GYSI--KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            YS+    G  +       ++D+  + G L +A  + KD+   PD   W A++    +H 
Sbjct: 507 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 566

Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           + +      +++   E  N  M+   S + A +G
Sbjct: 567 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 600


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 297/752 (39%), Positives = 443/752 (58%), Gaps = 48/752 (6%)

Query: 47  IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC 106
           ++S+     I +  +V WN   S Y+     E A+  F  M     R +  + ++MI+  
Sbjct: 46  LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGY 101

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN 166
             +      RK+     +   D D+ S N ++  Y K GNL  A A+F  +   D+VSWN
Sbjct: 102 LSNNKFDCARKV----FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN 157

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           A+++G   +   + A K+F QM    +  N  ++   L A       E  R+L  S +  
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW 213

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
           EI S   +  G    Y +   +D+AR +F  MP ++ I+WNI+I+G+ QNG   EA  LF
Sbjct: 214 EIVSWNCLMGG----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269

Query: 287 PWMYREGV--------GFDQTTL---STVL------KSVASFQAIGVCKQVHALSVKTAF 329
             +    V        GF Q  +   +T +      K+  S+ A+ +   V +  ++ A 
Sbjct: 270 EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM-IAGYVQSQQIEKAR 328

Query: 330 ESDDYIV-------NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           E  D +        N+++  Y +CG+++ A  +F E    D ++  +MI+ YAQ G  EE
Sbjct: 329 ELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEE 388

Query: 383 ALKLYLEMQDRE---INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           AL L+++M+ R+   +N  +  C+  L++CA ++A E GKQ+H  ++K GF +   AGN+
Sbjct: 389 ALHLFIKMK-RDGGILNRSALACA--LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L+ MY KCGSI++A   F +I ++ IVSW+ MI G A+HG GKEAL +F  M +  + P+
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPD 504

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +TLV VL AC+H GLV +   +F SM + +GI    +HY CMID+LGRAG+  EA+ L+
Sbjct: 505 DVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLM 564

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
            +MPF  +A+ WGALLGA+RI+ + E+G+ AAE +F +EP+ S  +VLLSN+YA++G W 
Sbjct: 565 KSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWR 624

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            V ++R  M+D  +KK PG SW+E+++K + FTVGD SH  ++ IYA L+E+   L K G
Sbjct: 625 EVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDG 684

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +V   +  LHDVEE EKE +L +HSEKLAVAFG+++ PPG  IRV KNLR+C DCH + +
Sbjct: 685 FVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIK 744

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  R+IIVRD NRFHHF  GSCSCG YW
Sbjct: 745 HISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 240/482 (49%), Gaps = 42/482 (8%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D    N ++  Y K GN   +R LF+ +PE+ VVSWN++ S +    F+EEA   F +
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH----------------GYSIKLGYDS- 129
           M++     NE S + +++A   +G     R++                 GY  K   D  
Sbjct: 179 MLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234

Query: 130 ----------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                     D  S N ++  YA+ G L +A  +F+++   D+ +W A+++G V +   D
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A ++F++M       N  ++ + +      +  E  R+L   +      S   +  G  
Sbjct: 295 EATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-- 348

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
             YA+CG++D+A+++F  MP+++ I+W  +ISG+ Q+G   EA  LF  M R+G   +++
Sbjct: 349 --YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            L+  L S A   A+ + KQ+H   VK  F++     N+L+  YGKCG +E+A  +F++ 
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D+V+  +MI  YA+ G G+EAL L+  M+   I PD      +L+AC++    ++G 
Sbjct: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGM 525

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
           +    + + +G  ++      ++++  + G +D+A      +P      +W A++G    
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 585

Query: 478 HG 479
           HG
Sbjct: 586 HG 587



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 126/233 (54%), Gaps = 14/233 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C     L LG Q+HG +V  GF +     N+L+ MY KCG+  ++  +F+ I E+ +
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ + Y    F +EA+  F+ M ++ I+P++ +L  +++AC+ +G  L+ + +  +
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTG--LVDKGMEYF 528

Query: 122 SIKLGYDSDMFSANA-----LVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
           +    Y +   +ANA     ++D+  + G L++A+ + K +  +PD  +W A++    +H
Sbjct: 529 NSM--YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 176 EHNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG--MELKELGRQLHCSLIK 225
              +   K  +++   E  N  M+   S L A +G   E++E+  ++    +K
Sbjct: 587 GDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/781 (34%), Positives = 437/781 (55%), Gaps = 14/781 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  C   + L LG ++H  ++  G + D  + N+LV MY  CG+F D + +F  + + S
Sbjct: 165 IVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSS 224

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+ W ++ +        EE +  F++M L G++ NE +  SM+  C        G  I  
Sbjct: 225 VLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDA 284

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++  + S    A +L+ +Y + G L+ A  + + +   D+V+WNA++  C  +  N  
Sbjct: 285 RILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWE 344

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH-----CSLIKMEIKSDPIVG 235
           A+ L ++M       N  TY S L+ACA +E    GR++H     C L++ E+     VG
Sbjct: 345 AIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVA----VG 400

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             ++ MY KCG  + A  +F  MP K+ ++WN VI+  + N    +A  LF  M  EG+ 
Sbjct: 401 NSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLR 460

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVK 354
            ++ TL ++L++    + + + +Q+HA +    F  +   V NS+++ Y +CG + DA K
Sbjct: 461 SNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKK 520

Query: 355 IFKESSAVDLVACTSMITAYAQF--GLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            F       LVA + ++ AYAQ   G G  A K + EM+   I P      S L+ACA +
Sbjct: 521 AFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAM 580

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           +  E G+ +H      GF+  +   GN+++NMY KCGS  DA   F ++P++ ++SW+++
Sbjct: 581 ATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSL 640

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I   A +G   EAL    +ML  G  P+  T VS+L   +HAGL+     HF S  +  G
Sbjct: 641 IVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHG 700

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPF-QANASVWGALLGAARIYKNVEVGQHA 590
           ++P      C++D+L R G    A EL+   P  QA+   W  LL A + Y + + G   
Sbjct: 701 LEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRC 760

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           AE +F +EP+ S + V+L+N+YAS G W + +++R+ M+   +KKEPG SWIE+   V+ 
Sbjct: 761 AERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHE 820

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           F  G+  H + +EI   L++++  + +AGYVP     +HDVEE +KE++L  HSE+LA+ 
Sbjct: 821 FISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIV 880

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGL++T PG TIRV KNLR+C DCH + + IS +V REI+VRD +RFHHF++G CSCG +
Sbjct: 881 FGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDF 940

Query: 771 W 771
           W
Sbjct: 941 W 941



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 188/647 (29%), Positives = 327/647 (50%), Gaps = 15/647 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC +  +L  G Q+H  VV +G  S+  ++NSLV MY KC +   + ++FD +  R V
Sbjct: 65  LDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDV 124

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ + Y       +A+     M   G++PN+ +  ++++ CA      LGRKIH  
Sbjct: 125 VSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHR 184

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            I  G + D    NALV MY   G+ +D  +VF  +    ++ W  +IAGC  +   +  
Sbjct: 185 IINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEG 244

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L +F++M    +  N  TY S ++ C  ++  + G  +   +++    S  ++   L+ +
Sbjct: 245 LLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISL 304

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y +CG +D A+ +   M +++++AWN +++   QNG + EA  L   M  EG G ++ T 
Sbjct: 305 YGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTY 364

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESS 360
            +VL++ A+ +A+   +++HA  +       +  V NS+I  YGKCG  E A+ +F+   
Sbjct: 365 LSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP 424

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+  ++I A       ++AL+L+  M+   +  + F   SLL AC  L   +  +Q
Sbjct: 425 RKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQ 484

Query: 421 VHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH- 478
           +H      GF  ++ A GNS+VNMYA+CGS+ DA +AF  + ++G+V+WS ++   AQ  
Sbjct: 485 IHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSK 544

Query: 479 -GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            G G+ A + F +M  +G+ P  +T VS L AC     +     H  SM ++       E
Sbjct: 545 DGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATL----EHGRSMHRRAAASGFVE 600

Query: 538 HYACM----IDILGRAGKFQEAMELVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAE 592
               +    I++ G+ G   +A  + D MP +   S W +L+ A A     +E      E
Sbjct: 601 TSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS-WNSLIVAYAHNGHALEALSSLQE 659

Query: 593 MLF-AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           ML    +P+  ++  +L  +  +  +   V   R  ++D+ L+   G
Sbjct: 660 MLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 706



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/475 (32%), Positives = 253/475 (53%), Gaps = 5/475 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY KC    D+  +FD I  ++V SW  + + Y       EA+  F  M   G RP++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
               ++ACA SG+   GR+IH   +  G  S++  +N+LV+MY K  ++  A  VF  + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 159 HPDIVSWNAVIAGCVLHEHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
             D+VSW A++A  V  ++  W  AL+   +M +  + PN  T+ + +  CA + L +LG
Sbjct: 121 LRDVVSWTAMLA--VYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLG 178

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           R++H  +I   ++ D I+G  LV MY  CGS D+ + +F  M + +++ W  +I+G  QN
Sbjct: 179 RKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQN 238

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   E   +F  M  EGV  ++ T  ++++   +  A+   + + A  +++ F S   + 
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            SLI  YG+CG ++ A  + +     D+VA  +M+TA AQ G   EA+ L   M      
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADR 455
            +     S+L ACANL A  QG+++H  ++  G +    A GNS++ MY KCG  + A  
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            F  +P +  VSW+A+I     + + ++AL++F  M  +G+  N  TL+S+L AC
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 241/489 (49%), Gaps = 20/489 (4%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MY K   + DA+ VF  I   ++ SW  ++A    + H   AL+LF +M+     P+   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +  AL ACA     + GRQ+H S++   + S+ I+   LV+MY KC  +  A  +F  M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +++++W  +++ + QNG   +A      M  EGV  +Q T  T++   A  + + + ++
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H   +    E D  + N+L+  YG CG  +D   +F       ++  T+MI   +Q G 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EE L ++ +M    +  +     S++  C NL A ++G+ +   I++  F S T    S
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L+++Y +CG +D A      +  R +V+W+AM+   AQ+G   EA+ +  +M  +G   N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC---MIDILGRAGKFQEAM 556
            +T +SVL AC +   +++ +   E   +      +Q   A    +I + G+ G+ + AM
Sbjct: 361 KVTYLSVLEACANLEALSQGR---EIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVG----QHAAEMLFAIEPE--KSSTHVLLSN 610
            + + MP + + S W A++       N  VG    Q A E+   +E E  +S+   LLS 
Sbjct: 418 SVFEAMPRKDDVS-WNAVI-------NASVGNSKFQDALELFHGMELEGLRSNEFTLLSL 469

Query: 611 IYASAGMWD 619
           + A  G+ D
Sbjct: 470 LEACGGLED 478


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 300/866 (34%), Positives = 460/866 (53%), Gaps = 107/866 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL--------- 52
           L++C ++  L     +HG +V  G  S  F+ N+L+  Y  CG   D+RRL         
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPN 70

Query: 53  -----------------------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                  F  +P R V SWN+L S Y        ++  F  M  
Sbjct: 71  VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHR 130

Query: 90  SG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           SG   PN F+ +  + +C   G+  L  ++ G   K G   D   A ALVDM+ + G ++
Sbjct: 131 SGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVD 190

Query: 149 DAVAVFKDIEHP-------------------------------DIVSWNAVIAGCVLHEH 177
            A  +F  I+ P                               D+VSWN +++       
Sbjct: 191 LASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 250

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL +   M+S  +  +  TYTS+L ACA +     G+QLH  +I+     DP V   
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASA 310

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LV++YAKCG   EA+ +F+ + ++N +AW ++I+G LQ+G   E+  LF  M  E +  D
Sbjct: 311 LVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLD 370

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q  L+T++    S   + + +Q+H+L +K+       + NSLI  Y KC +++ A  IF+
Sbjct: 371 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFR 430

Query: 358 ESSAVDLVACTSMITAYAQFG-----------------------LG--------EEALKL 386
             +  D+V+ TSMITA++Q G                       LG        E+ L++
Sbjct: 431 FMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRM 490

Query: 387 Y-LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           Y + + ++++ PD     +L   CA+L A + G Q+    +K G + DT   N+++ MY+
Sbjct: 491 YNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYS 550

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG I +A + F  +  + IVSW+AMI G +QHG GK+A+++F  +L+ G  P++I+ V+
Sbjct: 551 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 610

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL  C+H+GLV E K +F+ M++   I P  EH++CM+D+LGRAG   EA +L+D MP +
Sbjct: 611 VLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMK 670

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A VWGALL A +I+ N E+ + AA+ +F ++   S +++L++ IYA AG  D+ A++R
Sbjct: 671 PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIR 730

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  +KK PG SW+EV +KV+ F   D SH +   I  KLDE+ + + + GY   V 
Sbjct: 731 KLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGY---VR 787

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
           TD      S + ++  HHSEKLAVAFGL++ P    I + KNLRIC DCHT  + IS + 
Sbjct: 788 TD------SPRSEI--HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVT 839

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            RE ++RD  RFHHF  GSCSCG YW
Sbjct: 840 GREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 166/375 (44%), Gaps = 64/375 (17%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM------ 253
           +  AL++C         R LH  L+ + + S   +   L+  Y  CG++ +AR       
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66

Query: 254 --------------------------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                                     +F  MP +++ +WN ++SG+ Q+   + +   F 
Sbjct: 67  AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126

Query: 288 WMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            M+R G    +  T +  +KS  +     +  Q+  +  K   + D  +  +L+D + +C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186

Query: 347 GHVEDAVKIF---KESSAV----------------------------DLVACTSMITAYA 375
           G V+ A ++F   KE +                              D+V+   M++A +
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G   EAL + ++MQ + +  DS   +S L ACA LS+   GKQ+H  +I+     D +
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPY 306

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             ++LV +YAKCG   +A   F+ + DR  V+W+ +I G  QHG   E++++F QM  + 
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAEL 366

Query: 496 VLPNHITLVSVLCAC 510
           +  +   L +++  C
Sbjct: 367 MTLDQFALATLISGC 381



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 33/294 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           ++  C S+ DL LG Q+H + + +G      V+NSL+ MYAKC                 
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKD 436

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         GN   +R  FD +  ++V++WN++   Y+     E+ +  +  M+ 
Sbjct: 437 IVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLS 496

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              +RP+  +  ++   CA  G + LG +I G ++K+G   D   ANA++ MY+K G + 
Sbjct: 497 EKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRIL 556

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  VF  +   DIVSWNA+I G   H     A+++F  +      P+  +Y + L  C+
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMPEK 261
              L + G+     + ++   S  +     +VD+  + G + EA+ +   MP K
Sbjct: 617 HSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMK 670



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 14/189 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + K C       LG Q+ G  V  G   D  VAN+++ MY+KCG  +++R++FD +  + 
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG----- 115
           +VSWN++ + Y      ++A+  F +++  G +P+  S  ++++ C+ SG    G     
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFD 629

Query: 116 --RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
             +++H  S  L + S M      VD+  + G+L +A  +  ++   P    W A+++ C
Sbjct: 630 MMKRVHNISPGLEHFSCM------VDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSAC 683

Query: 173 VLHEHNDWA 181
            +H +N+ A
Sbjct: 684 KIHGNNELA 692


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 280/746 (37%), Positives = 424/746 (56%), Gaps = 62/746 (8%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+ +G R + F+L  ++ AC        G   HG     G++S++F  NALV MY++ G+
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 147 LEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDW-ALKLFQQM------KSSEINPN 196
           LE+A  +F +I      D++SWN++++  V    N W AL LF +M      K +    +
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERSD 119

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           + +  + L AC  ++     +++H + I+     D  VG  L+D YAKCG M+ A  +F+
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS-------------- 302
           +M  K++++WN +++G+ Q+G    A  LF  M +E +  D  T +              
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 303 ---------------------TVLKSVASFQAIGVCKQVHALSVKTAF---------ESD 332
                                +VL + AS  A     ++HA S+K            E +
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 333 DYIV-NSLIDAYGKCGHVEDAVKIFKESS--AVDLVACTSMITAYAQFGLGEEALKLYLE 389
           D +V N+LID Y KC   + A  IF +      ++V  T MI  +AQ+G   +ALKL++E
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 390 M--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT--FAGNSLVNMYA 445
           M  +   + P+++  S +L ACA+L+A   GKQ+H ++++      +  F  N L+NMY+
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG +D A   F  +  +  +SW++M+ G   HGRG EAL +F +M + G +P+ IT + 
Sbjct: 420 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 479

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+H G+V +   +F+SM   +G+ P  EHYA  ID+L R G+  +A + V  MP +
Sbjct: 480 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A VW ALL A R++ NVE+ +HA   L  +  E   ++ L+SNIYA+AG W +VA++R
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 599

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             MK + +KK PG SW++ +    +F VGDRSH  S +IYA L+ + D +   GYVP   
Sbjct: 600 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETN 659

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             LHDV+E EK  LL  HSEKLA+A+GL+ T PG  IR+ KNLR+C DCH++F +ISKIV
Sbjct: 660 FALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIV 719

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
             EI+VRD +RFHHF+NGSCSCGGYW
Sbjct: 720 DHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 265/555 (47%), Gaps = 62/555 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC        G   HG++   GF+S+ F+ N+LV MY++CG+  ++  +FD I +R 
Sbjct: 16  VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 75

Query: 61  ---VVSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGD 111
              V+SWNS+ S +V       A+  F +M L      +  R +  S+ +++ AC     
Sbjct: 76  IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 135

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
               +++HG +I+ G   D+F  NAL+D YAK G +E+AV VF  +E  D+VSWNA++AG
Sbjct: 136 VPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 195

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYT------------------------------ 201
                +   A +LF+ M+   I  +M T+T                              
Sbjct: 196 YSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPN 255

Query: 202 -----SALKACAGMELKELGRQLHCSLIKMEIKS----------DPIVGVGLVDMYAKCG 246
                S L ACA +     G ++H   +K  + +          D +V   L+DMY+KC 
Sbjct: 256 CVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 315

Query: 247 SMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTLS 302
           S   AR IF  +P  E+N++ W ++I GH Q G   +A  LF  M  E  GV  +  T+S
Sbjct: 316 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 375

Query: 303 TVLKSVASFQAIGVCKQVHALSVK-TAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESS 360
            +L + A   AI + KQ+HA  ++   ++S  Y V N LI+ Y KCG V+ A  +F   S
Sbjct: 376 CILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS 435

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               ++ TSM+T Y   G G EAL ++ +M+     PD      +L AC++    +QG  
Sbjct: 436 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 495

Query: 421 VHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               +   +G           +++ A+ G +D A +   ++P +   V W A++     H
Sbjct: 496 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 555

Query: 479 GRGKEALQMFGQMLE 493
              + A     +++E
Sbjct: 556 SNVELAEHALNKLVE 570



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 214/452 (47%), Gaps = 66/452 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S K +    +VHG  +  G   D FV N+L+  YAKCG   ++ ++F+ +  + 
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 185

Query: 61  VVSWNSLFSCY--------------------VHCDFL---------------EEAVCFFK 85
           VVSWN++ + Y                    +  D +                EA+  F+
Sbjct: 186 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 245

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL----------GYDSDMFSAN 135
           +M+ SG  PN  ++ S+++ACA  G    G +IH YS+K           G D D+   N
Sbjct: 246 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 305

Query: 136 ALVDMYAKVGNLEDAVAVFKDI--EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE- 192
           AL+DMY+K  + + A ++F DI  E  ++V+W  +I G   +  ++ ALKLF +M S   
Sbjct: 306 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 365

Query: 193 -INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI--KSDPIVGVGLVDMYAKCGSMD 249
            + PN +T +  L ACA +    +G+Q+H  +++      S   V   L++MY+KCG +D
Sbjct: 366 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 425

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR +F  M +K+ I+W  +++G+  +G   EA  +F  M + G   D  T   VL + +
Sbjct: 426 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 485

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNS------LIDAYGKCGHVEDAVKIFK----ES 359
                G+  Q   LS   +  +D  +          ID   + G ++ A K  K    E 
Sbjct: 486 H---CGMVDQ--GLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEP 540

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           +AV  VA  S    ++   L E AL   +EM 
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVEMN 572


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 291/774 (37%), Positives = 425/774 (54%), Gaps = 96/774 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++  C S    +L  Q+     F    + + V+ N ++    +  N   +R LFD +PER
Sbjct: 86  MISGCLSNDKFYLARQL-----FEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPER 140

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VVSWN++ S Y    +++EA   F EM       N  S + M+ A   +G     R++ 
Sbjct: 141 DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRL- 195

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               +   D ++ S N ++  Y K   L DA  +F  +   D VSWN +I+G   +    
Sbjct: 196 ---FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 252

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A +LF++    ++    FT+T+                                   +V
Sbjct: 253 EAQRLFEESPVRDV----FTWTA-----------------------------------MV 273

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
             Y + G +DEAR +F  MPEKN ++WN +I+G++Q     +A  LF  M          
Sbjct: 274 SGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM---------- 323

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
                            C+ V +              N++I  Y + G +  A   F   
Sbjct: 324 ----------------PCQNVSSW-------------NTMITGYAQNGDIAQARNFFDRM 354

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVCSSLLNACANLSAYEQ 417
              D ++  ++I  YAQ G GEEAL L++EM+     +N  +F  +S L+ CA ++A E 
Sbjct: 355 PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF--TSTLSTCAEIAALEL 412

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GKQVH  ++K G  S  + GN+L+ MY KCG+IDDA   F  I ++ +VSW+ MI G A+
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG GKEAL +F  M + G+LP+ +T+V VL AC+H GLV +   +F SM + +GI    +
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 532

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CMID+LGRAG+  +A  L+  MPF+ +A+ WGALLGA+RI+ N E+G+ AA+M+F +
Sbjct: 533 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 592

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP+ S  +VLLSN+YA++G W +V ++R  M+D  +KK PG SW+EV++K++TFTVGD  
Sbjct: 593 EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV 652

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H     IY  L+E+   + K GYV   +  LHDVEE EK  +L +HSEKLAVAFG++A P
Sbjct: 653 HPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIP 712

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G  IRV KNLR+C DCH + + ISKIV R II+RD +RFHHF  G CSCG YW
Sbjct: 713 AGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 187/399 (46%), Gaps = 50/399 (12%)

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           L  D+D+   N  +  + + G  + A+ +F  +     +SWNA+I+GC+ ++    A +L
Sbjct: 43  LATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQL 102

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F++M + ++     ++   +  C         R L   +     + D +    ++  YA+
Sbjct: 103 FEKMPTRDL----VSWNVMISGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYAQ 154

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G + EA+ IF  MP KN I+WN +++ ++QNG   +A  LF                  
Sbjct: 155 NGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF------------------ 196

Query: 305 LKSVASFQAI-------GVCKQVHALSVKTAF----ESDDYIVNSLIDAYGKCGHVEDAV 353
            +S A ++ I       G  K+   +  +  F    E D+   N++I  Y + G + +A 
Sbjct: 197 -ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQ 255

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F+ES   D+   T+M++ Y Q G+ +EA +++  M ++         S   NA   ++
Sbjct: 256 RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN--------SVSWNAI--IA 305

Query: 414 AYEQGKQVHVHIIKFGFM--SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
            Y Q K++      F  M   +  + N+++  YA+ G I  A   F  +P R  +SW+A+
Sbjct: 306 GYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAI 365

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           I G AQ G G+EAL +F +M  DG   N  T  S L  C
Sbjct: 366 IAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC 404



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 51/362 (14%)

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG---------- 293
           K  + ++ +    L  + +++ WNI I+ H++NG    A  LF  M R            
Sbjct: 30  KPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISG 89

Query: 294 -VGFDQTTLSTVL------KSVASFQAI--GVCKQVHALSVKTAF----ESDDYIVNSLI 340
            +  D+  L+  L      + + S+  +  G  +  +  + +  F    E D    N+++
Sbjct: 90  CLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAML 149

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y + G+V++A +IF E    + ++   M+ AY Q G  E+A +L+    D E      
Sbjct: 150 SGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWE------ 203

Query: 401 VCSSLLNACANLSAY-EQGKQVHVHIIKFGFM--SDTFAGNSLVNMYAKCGSIDDADRAF 457
               L++    +  Y ++ + V    I F  M   D  + N++++ YA+ G + +A R F
Sbjct: 204 ----LISWNCMMGGYVKRNRLVDARGI-FDRMPERDEVSWNTMISGYAQNGELLEAQRLF 258

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
            E P R + +W+AM+ G  Q+G   EA ++F  M E     N ++  +++        + 
Sbjct: 259 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAIIAGYVQCKRMD 314

Query: 518 EAKHHFESMEKKFGIQPMQE--HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           +A+  FE+M       P Q    +  MI    + G   +A    D MP Q ++  W A++
Sbjct: 315 QARELFEAM-------PCQNVSSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAII 366

Query: 576 GA 577
             
Sbjct: 367 AG 368


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/655 (38%), Positives = 398/655 (60%), Gaps = 1/655 (0%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +I+   +  G     F    LV+  + +G +  A  +F     PD+  WNA++     H 
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A++++ +M+ + ++P+ F++   LKAC+ +   E+GR++H  + +   +SD  V  
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           GLV +YAKCG +  A  +F  + ++ +++W  +ISG+ QNG  +EA  +F  M +  V  
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   L +VL++    + +   K +H   +K   E +  ++ SL   Y KCGHV  A   F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +     L+   +MI+ Y + G  EEA++L+  M+ + I PDS   +S + ACA + + E
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
             + +  +I    F +D     SL++ YAKCGS+D A   F  IPD+ +V WSAM+ G  
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG+G+E++ +F  M + GV PN +T V +L AC ++GLV E    F  M + +GI+P  
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRH 511

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +HYAC++D+LGRAG    A   V  MP +   SVWGALL A +I+++V +G++AAE LF+
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFS 571

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P  +  +V LSN+YAS+ +WD VAKVR  M++  L K  G S IE+  K+  F  GD+
Sbjct: 572 LDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDK 631

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           +H RSKEI+ +++++   L +AG+VP  E+ LHD+   E E+ L +HSE+LA+A+GLI+T
Sbjct: 632 THPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLIST 691

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PPG T+R+ KNLR C +CH + + ISK+VSREI+VRD  RFHHF++G+CSCG YW
Sbjct: 692 PPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 234/464 (50%), Gaps = 1/464 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q++  ++ TG     F+   LV   +  G    +R+LFD  P+  V  WN++  CY    
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           F   A+  +  M ++ + P+ FS   ++ AC+      +GR++HG   + G++SD+F  N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            LV +YAK G +  A AVF  +    IVSW ++I+G   +     AL++F +M+ + + P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +     S L+A   +E  E G+ +H  +IKM ++ +  + + L  +YAKCG +  AR+ F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           + +   +LI WN +ISG+++NG   EA  LF  M  + +  D  T+++ + + A   ++ 
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + + +      + F +D  +  SLID Y KCG V+ A  +F      D+V  ++M+  Y 
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G E++ L+  M+   ++P+      LL AC N    E+G  +   +  +G      
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQ 512

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               +V++  + G +D A      +P + G+  W A++     H
Sbjct: 513 HYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 193/352 (54%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC++   L +G +VHG +   GF+SD FV N LV +YAKCG  + +  +F  + +R+
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRT 238

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW S+ S Y       EA+  F EM  + +RP+  +L S++ A     D   G+ IHG
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK+G + +     +L  +YAK G++  A   F  +E+P ++ WNA+I+G V + + + 
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++LF+ MKS  I P+  T TS++ ACA +   EL R +   +   E ++D IV   L+D
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLID 418

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCGS+D AR +F  +P+K+++ W+ ++ G+  +G   E+  LF  M + GV  +  T
Sbjct: 419 TYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVT 478

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
              +L +  +   +     +         E        ++D  G+ GH++ A
Sbjct: 479 FVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRA 530


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 294/814 (36%), Positives = 453/814 (55%), Gaps = 81/814 (9%)

Query: 22  VFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEA 80
           VF G      VA N++V  Y + G+   +R+LFDA+P R V SWN++ + Y H   +EEA
Sbjct: 117 VFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEA 176

Query: 81  VCFF-------------------------------KEMVLSGIRPNEFSLSSMINACAGS 109
              F                               + M+  G+ P + +L S+++A    
Sbjct: 177 RNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHL 236

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAV 168
           G   +   IH    K G++ D+    A+++ Y K V  L+ AV  F+ +   +  +W+ +
Sbjct: 237 GKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTI 296

Query: 169 IAGCVLHEHNDWALKLFQQ--MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           IA        D A  ++Q+  +KS     +M T            L   GR     ++  
Sbjct: 297 IAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLT-----------GLARYGRIDDAKILFD 345

Query: 227 EIKSDPIVGV-GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
           +I    +V    ++  Y +   +DEA  +F+ MP +N I+W  +I+G+ +NG   +A   
Sbjct: 346 QIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVS 405

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
              ++R+G+    ++L++   + ++ +A+   KQVH+L+VK   + + Y+ N+LI  YGK
Sbjct: 406 LQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGK 465

Query: 346 CGHV-------------------------------EDAVKIFKESSAVDLVACTSMITAY 374
              +                               ++A  +F    + D+V+ T++I+A 
Sbjct: 466 YRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISAC 525

Query: 375 AQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           AQ   G EA++++  M  +RE+ P+  + + LL    NL A + G+Q+H   IK G  S 
Sbjct: 526 AQADQGNEAVEIFRSMLHEREL-PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSG 584

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
               N+LV+MY KC S D   + F  + +R I +W+ +I G AQHG G+EA++M+  M+ 
Sbjct: 585 LVVANALVSMYFKCSSADSL-KVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVS 643

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            GVLPN +T V +L AC+H+GLV E    F+SM   +G+ P+ EHYACM+D+LGRAG  Q
Sbjct: 644 AGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQ 703

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            A   +  MP + ++ +W ALLGA +I+KNVE+G+ AAE LF+IEP  +  +V+LSNIY+
Sbjct: 704 GAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYS 763

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           S GMWD VAKVR+ MK+  + K+PG SW+++K+K+++F  GD  H + + IYA L E+  
Sbjct: 764 SQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYT 823

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
           LL   GYVP  +  LHD++E +KE  L +HSEKLAVA+GL+ TP G  I++ KNLRIC D
Sbjct: 824 LLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGD 883

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           CHT  +F+S +  REI VRD NRFHHFRNGSCSC
Sbjct: 884 CHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 228/506 (45%), Gaps = 63/506 (12%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR-RLFDAIPERSVVSWNSLFSCYVHCD 75
           +H +V  TGF+ D  V  +++  Y K  N +DS  + F+ +  R+  +W+++ +      
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD----SLLGRKIHGYSIKLGYDSDM 131
            +++A   ++   L  +     S +SM+   A  G      +L  +IH        + ++
Sbjct: 305 RIDDAFAVYQRDPLKSVP----SRTSMLTGLARYGRIDDAKILFDQIH--------EPNV 352

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
            S NA++  Y +   +++A  +F  +   + +SW  +IAG   +  ++ AL   Q +   
Sbjct: 353 VSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRK 412

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM--- 248
            + P++ + TS+  AC+ +E  E G+Q+H   +K   + +  V   L+ +Y K  S+   
Sbjct: 413 GMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSV 472

Query: 249 ----------------------------DEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
                                       DEAR +F+ MP  ++++W  +IS   Q     
Sbjct: 473 RQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGN 532

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  +F  M  E    +   L+ +L    +  A  + +Q+H +++K   +S   + N+L+
Sbjct: 533 EAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALV 592

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y KC    D++K+F      D+    ++IT YAQ GLG EA+++Y  M    + P+  
Sbjct: 593 SMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEV 651

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA-------KCGSIDDA 453
               LL+AC++    ++G Q       F  MS  +    L+  YA       + G +  A
Sbjct: 652 TFVGLLHACSHSGLVDEGHQF------FKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGA 705

Query: 454 DRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +    ++P +   V WSA++G    H
Sbjct: 706 EHFIYDMPIEPDSVIWSALLGACKIH 731



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/534 (23%), Positives = 229/534 (42%), Gaps = 96/534 (17%)

Query: 41  AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLS 100
            + G   ++R +FD++P R +++WNS+   + +C+                         
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMI--FAYCN------------------------- 76

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
              N    +G SL    I G +++ G          L+  YA+ G + DA  VF  +   
Sbjct: 77  ---NGMPDAGRSL-ADAISGGNLRTG--------TILLSGYARAGRVRDARRVFDGMGVR 124

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           + V+WNA++   V +     A KLF  M S +++    ++ + L                
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVS----SWNTMLTG-------------- 166

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
                                Y     M+EAR +F  MPE+N ++W ++ISG++      
Sbjct: 167 ---------------------YCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHG 205

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
            A  +F  M  EG+  +Q  L +VL +V      G+ + +H L  KT FE D  +  +++
Sbjct: 206 RAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265

Query: 341 DAYGK-CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           + Y K    ++ AVK F+  +A +    +++I A +Q G  ++A  +Y      + +P  
Sbjct: 266 NGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY------QRDPLK 319

Query: 400 FVCS--SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
            V S  S+L   A     +  K +   I +     +  + N+++  Y +   +D+A+  F
Sbjct: 320 SVPSRTSMLTGLARYGRIDDAKILFDQIHE----PNVVSWNAMITGYMQNEMVDEAEDLF 375

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           + +P R  +SW+ MI G A++GR ++AL     +   G+LP+  +L S   AC++   + 
Sbjct: 376 NRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALE 435

Query: 518 EAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANAS 569
             K    S+  K G Q     Y C  +I + G+        ++ D M  +   S
Sbjct: 436 TGK-QVHSLAVKAGCQ--FNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 36/301 (11%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN------------------ 45
           AC++ + L  G QVH + V  G   + +V N+L+ +Y K  +                  
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486

Query: 46  -------------FIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
                        F ++R +F+ +P   VVSW ++ S     D   EAV  F+ M+    
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            PN   L+ ++      G   LG++IH  +IKLG DS +  ANALV MY K  +  D++ 
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLK 605

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF  +E  DI +WN +I G   H     A++++Q M S+ + PN  T+   L AC+   L
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665

Query: 213 KELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIV 269
            + G Q   S+   +    P++     +VD+  + G +  A    + MP E + + W+ +
Sbjct: 666 VDEGHQFFKSM-SSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSAL 724

Query: 270 I 270
           +
Sbjct: 725 L 725



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 4/201 (1%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           LG Q+H I +  G DS   VAN+LV MY KC +  DS ++FD++ ER + +WN++ + Y 
Sbjct: 568 LGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYA 626

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IHGYSIKLGYDSDM 131
                 EA+  ++ MV +G+ PNE +   +++AC+ SG    G +     S   G    +
Sbjct: 627 QHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLL 686

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
                +VD+  + G+++ A     D+   PD V W+A++  C +H++ +   +  +++ S
Sbjct: 687 EHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFS 746

Query: 191 SEI-NPNMFTYTSALKACAGM 210
            E  N   +   S + +  GM
Sbjct: 747 IEPSNAGNYVMLSNIYSSQGM 767



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 132/347 (38%), Gaps = 93/347 (26%)

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
            + G + EAR +F  MP +++IAWN +I  +  NG      SL                 
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL----------------- 86

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
                            +   +++T           L+  Y + G V DA ++F      
Sbjct: 87  --------------ADAISGGNLRTG--------TILLSGYARAGRVRDARRVFDGMGVR 124

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           + VA  +M+T Y Q G    A KL+  M  R+++                          
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVS-------------------------- 158

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG---LAQHG 479
                        + N+++  Y     +++A   F  +P+R  VSW+ MI G   + QHG
Sbjct: 159 -------------SWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHG 205

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL--VAEAKH---HFESMEKKFGI-Q 533
           R   A  MF  ML +G+ P    LVSVL A  H G   + E+ H   H    E+   +  
Sbjct: 206 R---AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGT 262

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            +   Y   +++L  A KF E M   +   +   +++  AL  A RI
Sbjct: 263 AILNGYTKDVNMLDSAVKFFEGMAARNEYTW---STIIAALSQAGRI 306


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/772 (36%), Positives = 444/772 (57%), Gaps = 45/772 (5%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           NS++  Y      +D+R LF+ +PER++VSW  + S Y   +   +A   F +M   G+ 
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK-VGNLEDAVA 152
           P++ + +S ++A  G G+  +   +   ++K G++ D+    A++++Y++    L+ A+ 
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
            F+ +   +  +W+ +IA        D A+ ++++     I         A +      L
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI---------ACRTALITGL 332

Query: 213 KELGRQLHCSLIKMEIKSDPIVGV--GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
            + GR +  + I  E   +PIV     L+  Y + G ++EA+ +F  MP +N I+W  +I
Sbjct: 333 AQCGR-IDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMI 391

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           +G+ QNG   EA  L   ++R G+    ++L+++  + ++  A+    QVH+L+VK   +
Sbjct: 392 AGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            + +  N+LI  YGKC ++E A ++F      D+V+  S + A  Q  L +EA   +  M
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM 511

Query: 391 QDRE-------IN------------------------PDSFVCSSLLNACANLSAYEQGK 419
             R+       I+                        P+S + + LL  C +L A + G+
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   IK G  S+    N+L++MY KCG  D + R F  + +R I +W+ +I G AQHG
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHG 630

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+EA++M+  M   GVLPN +T V +L AC+HAGLV E    F+SM + +G+ P+ EHY
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+LGR G  Q A + +  MP + +  +W ALLGA +I+KN E+G+ AAE LF IEP
Sbjct: 691 ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEP 750

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             +  +V+LSNIY+S GMW  VA+VR+ MK   + KEPG SW ++KDK+++F  GD+ H 
Sbjct: 751 SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHE 810

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           + +EI A L+E+  LL   GYVP  E  LHD++E +KE  L +HSEKLAVA+ L+ATP G
Sbjct: 811 QIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKG 870

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I++ KNLRIC DCHT  +F+S +  R+I +RD NRFHHFRNGSCSC  +W
Sbjct: 871 MPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 244/520 (46%), Gaps = 56/520 (10%)

Query: 41  AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLS 90
            + G   ++R +FDA+P R +++WNS+ S Y H    + A   +  +          +LS
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 91  G-----------------IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS---- 129
           G                 +  N  + ++MI+    +GD  + R++        +D+    
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL--------FDAMPSR 156

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D+ S N+++  Y     + DA  +F+ +   ++VSW  +I+G    E++  A  +F +M 
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS-M 248
              + P+   + SAL A  G+   ++   L    +K   + D ++G  ++++Y++  S +
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D A   F  M E+N   W+ +I+  L +GG ++AA            +++  + ++    
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAA-LSHGGRIDAAIAV---------YERDPVKSIACRT 326

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           A    +  C ++    +      +  +V  N+LI  Y + G V +A ++F +    + ++
Sbjct: 327 ALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS 386

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
              MI  YAQ G  EEAL L  E+    + P     +S+  AC+N+ A E G QVH   +
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G   ++FA N+L+ MY KC +++ A + FS +  + IVSW++ +  L Q+    EA  
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARN 506

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
            F  ML      + ++  +++ A  HA    EA   F++M
Sbjct: 507 TFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM 542



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 260/555 (46%), Gaps = 63/555 (11%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR-RLFDAIPERSVVSWNSLF 68
           D+   L+V  + + TGF+ D  +  +++ +Y++  + +D+  + F+++ ER+  +W+++ 
Sbjct: 241 DVLESLRV--LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMI 298

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS-LLGRKIHGYSIKLGY 127
           +   H   ++ A+  ++   +  I     +L + +  C    D+ +L  +I         
Sbjct: 299 AALSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQCGRIDDARILFEQIP-------- 349

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           +  + S NAL+  Y + G + +A  +F  +   + +SW  +IAG   +  ++ AL L Q+
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +  S + P++ + TS   AC+ +   E G Q+H   +K+  + +      L+ MY KC +
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY-REGVGF---------- 296
           M+ AR +F  M  K++++WN  ++  +QN    EA + F  M  R+ V +          
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHA 529

Query: 297 --------------------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
                               +   L+ +L    S  A  + +Q+H +++K   +S+  + 
Sbjct: 530 EQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVA 589

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N+LI  Y KCG   D+ +IF      D+    ++IT YAQ GLG EA+K+Y  M+   + 
Sbjct: 590 NALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVL 648

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL-------VNMYAKCGS 449
           P+      LLNAC++    ++G +       F  MS  +    L       V++  + G 
Sbjct: 649 PNEVTFVGLLNACSHAGLVDEGWKF------FKSMSQDYGLTPLPEHYACMVDLLGRTGD 702

Query: 450 IDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVS 505
           +  A++   ++P +   V WSA++G    H     GK A +   + +E     N++ L +
Sbjct: 703 VQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFR-IEPSNAGNYVMLSN 761

Query: 506 VLCACNHAGLVAEAK 520
           +  +    G VAE +
Sbjct: 762 IYSSLGMWGEVAEVR 776



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 34/300 (11%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC++   L  G QVH + V  G   + F  N+L+ MY KC N   +R++F  +  + +VS
Sbjct: 428 ACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487

Query: 64  WNSLFSCYVHCDFLE-------------------------------EAVCFFKEMVLSGI 92
           WNS  +  V  D L+                               EA+  FK M     
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            PN   L+ ++  C   G S +G++IH  +IKLG DS++  ANAL+ MY K G   D+  
Sbjct: 548 LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRR 606

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +E  DI +WN +I G   H     A+K++Q M+S+ + PN  T+   L AC+   L
Sbjct: 607 IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGL 666

Query: 213 KELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
            + G +   S+ +   +   P     +VD+  + G +  A    + MP E + + W+ ++
Sbjct: 667 VDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 213/469 (45%), Gaps = 52/469 (11%)

Query: 142 AKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYT 201
            ++G + +A  VF  +   DI++WN++I+    +   D A  L+  +    +       +
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 202 SALKACAGMELKE---------------------------LGRQLHCSLIKMEIKSDPIV 234
              +    +E +                            + R+L  ++   ++ S   +
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             G    Y     M +AR +F  MPE+NL++W ++ISG+ +     +A  +F  M+REG+
Sbjct: 165 LTG----YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGL 220

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED-AV 353
             DQ+  ++ L +V     + V + +  L++KT FE D  I  ++++ Y +   V D A+
Sbjct: 221 LPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAI 280

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP-DSFVCSSLLNACANL 412
           K F+     +    ++MI A +  G  + A+ +Y      E +P  S  C + L     +
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY------ERDPVKSIACRTAL-----I 329

Query: 413 SAYEQGKQVHVHIIKFGFMSDTF--AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +   Q  ++    I F  + +    + N+L+  Y + G +++A   F ++P R  +SW+ 
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G AQ+GR +EAL +  ++   G+LP+  +L S+  AC++  +  E      S+  K 
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNI-VALETGTQVHSLAVKV 448

Query: 531 GIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           G Q     +AC  +I + G+    + A ++   M  +   S W + L A
Sbjct: 449 GCQ--FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS-WNSFLAA 494



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 7/205 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S     +G Q+H + +  G DS+  VAN+L+ MY KCG   DSRR+FD + ER 
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERD 615

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           + +WN++ + Y       EA+  ++ M  +G+ PNE +   ++NAC+ +G    G K   
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S   G          +VD+  + G+++ A     D+   PD V W+A++  C +H++ 
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735

Query: 179 DW----ALKLFQQMKSSEINPNMFT 199
           +     A KLF+   S+  N  M +
Sbjct: 736 EIGKRAAEKLFRIEPSNAGNYVMLS 760


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/772 (36%), Positives = 444/772 (57%), Gaps = 45/772 (5%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           NS++  Y      +D+R LF+ +PER++VSW  + S Y   +   +A   F +M   G+ 
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK-VGNLEDAVA 152
           P++ + +S ++A  G G+  +   +   ++K G++ D+    A++++Y++    L+ A+ 
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
            F+ +   +  +W+ +IA        D A+ ++++     I         A +      L
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI---------ACRTALITGL 332

Query: 213 KELGRQLHCSLIKMEIKSDPIVGV--GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
            + GR +  + I  E   +PIV     L+  Y + G ++EA+ +F  MP +N I+W  +I
Sbjct: 333 AQCGR-IDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMI 391

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           +G+ QNG   EA  L   ++R G+    ++L+++  + ++  A+    QVH+L+VK   +
Sbjct: 392 AGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            + +  N+LI  YGKC ++E A ++F      D+V+  S + A  Q  L +EA   +  M
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM 511

Query: 391 QDRE-------IN------------------------PDSFVCSSLLNACANLSAYEQGK 419
             R+       I+                        P+S + + LL  C +L A + G+
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   IK G  S+    N+L++MY KCG  D + R F  + +R I +W+ +I G AQHG
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHG 630

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+EA++M+  M   GVLPN +T V +L AC+HAGLV E    F+SM + +G+ P+ EHY
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+LGR G  Q A + +  MP + +  +W ALLGA +I+KN E+G+ AAE LF IEP
Sbjct: 691 ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEP 750

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             +  +V+LSNIY+S GMW  VA+VR+ MK   + KEPG SW ++KDK+++F  GD+ H 
Sbjct: 751 SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHE 810

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           + +EI A L+E+  LL   GYVP  E  LHD++E +KE  L +HSEKLAVA+ L+ATP G
Sbjct: 811 QIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKG 870

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I++ KNLRIC DCHT  +F+S +  R+I +RD NRFHHFRNGSCSC  +W
Sbjct: 871 MPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 244/520 (46%), Gaps = 56/520 (10%)

Query: 41  AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLS 90
            + G   ++R +FDA+P R +++WNS+ S Y H    + A   +  +          +LS
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 91  G-----------------IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS---- 129
           G                 +  N  + ++MI+    +GD  + R++        +D+    
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL--------FDAMPSR 156

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D+ S N+++  Y     + DA  +F+ +   ++VSW  +I+G    E++  A  +F +M 
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS-M 248
              + P+   + SAL A  G+   ++   L    +K   + D ++G  ++++Y++  S +
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D A   F  M E+N   W+ +I+  L +GG ++AA            +++  + ++    
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAA-LSHGGRIDAAIAV---------YERDPVKSIACRT 326

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           A    +  C ++    +      +  +V  N+LI  Y + G V +A ++F +    + ++
Sbjct: 327 ALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS 386

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
              MI  YAQ G  EEAL L  E+    + P     +S+  AC+N+ A E G QVH   +
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G   ++FA N+L+ MY KC +++ A + FS +  + IVSW++ +  L Q+    EA  
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARN 506

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
            F  ML      + ++  +++ A  HA    EA   F++M
Sbjct: 507 TFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM 542



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 260/555 (46%), Gaps = 63/555 (11%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR-RLFDAIPERSVVSWNSLF 68
           D+   L+V  + + TGF+ D  +  +++ +Y++  + +D+  + F+++ ER+  +W+++ 
Sbjct: 241 DVLESLRV--LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMI 298

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS-LLGRKIHGYSIKLGY 127
           +   H   ++ A+  ++   +  I     +L + +  C    D+ +L  +I         
Sbjct: 299 AALSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQCGRIDDARILFEQIP-------- 349

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           +  + S NAL+  Y + G + +A  +F  +   + +SW  +IAG   +  ++ AL L Q+
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +  S + P++ + TS   AC+ +   E G Q+H   +K+  + +      L+ MY KC +
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY-REGVGF---------- 296
           M+ AR +F  M  K++++WN  ++  +QN    EA + F  M  R+ V +          
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHA 529

Query: 297 --------------------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
                               +   L+ +L    S  A  + +Q+H +++K   +S+  + 
Sbjct: 530 EQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVA 589

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N+LI  Y KCG   D+ +IF      D+    ++IT YAQ GLG EA+K+Y  M+   + 
Sbjct: 590 NALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVL 648

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL-------VNMYAKCGS 449
           P+      LLNAC++    ++G +       F  MS  +    L       V++  + G 
Sbjct: 649 PNEVTFVGLLNACSHAGLVDEGWKF------FKSMSQDYGLTPLPEHYACMVDLLGRTGD 702

Query: 450 IDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVS 505
           +  A++   ++P +   V WSA++G    H     GK A +   + +E     N++ L +
Sbjct: 703 VQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFR-IEPSNAGNYVMLSN 761

Query: 506 VLCACNHAGLVAEAK 520
           +  +    G VAE +
Sbjct: 762 IYSSLGMWGEVAEVR 776



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 34/300 (11%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC++   L  G QVH + V  G   + F  N+L+ MY KC N   +R++F  +  + +VS
Sbjct: 428 ACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487

Query: 64  WNSLFSCYVHCDFLE-------------------------------EAVCFFKEMVLSGI 92
           WNS  +  V  D L+                               EA+  FK M     
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            PN   L+ ++  C   G S +G++IH  +IKLG DS++  ANAL+ MY K G   D+  
Sbjct: 548 LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRR 606

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +E  DI +WN +I G   H     A+K++Q M+S+ + PN  T+   L AC+   L
Sbjct: 607 IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGL 666

Query: 213 KELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
            + G +   S+ +   +   P     +VD+  + G +  A    + MP E + + W+ ++
Sbjct: 667 VDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 213/469 (45%), Gaps = 52/469 (11%)

Query: 142 AKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYT 201
            ++G + +A  VF  +   DI++WN++I+    +   D A  L+  +    +       +
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 202 SALKACAGMELKE---------------------------LGRQLHCSLIKMEIKSDPIV 234
              +    +E +                            + R+L  ++   ++ S   +
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             G    Y     M +AR +F  MPE+NL++W ++ISG+ +     +A  +F  M+REG+
Sbjct: 165 LTG----YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGL 220

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED-AV 353
             DQ+  ++ L +V     + V + +  L++KT FE D  I  ++++ Y +   V D A+
Sbjct: 221 LPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAI 280

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP-DSFVCSSLLNACANL 412
           K F+     +    ++MI A +  G  + A+ +Y      E +P  S  C + L     +
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY------ERDPVKSIACRTAL-----I 329

Query: 413 SAYEQGKQVHVHIIKFGFMSDTF--AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +   Q  ++    I F  + +    + N+L+  Y + G +++A   F ++P R  +SW+ 
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G AQ+GR +EAL +  ++   G+LP+  +L S+  AC++  +  E      S+  K 
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNI-VALETGTQVHSLAVKV 448

Query: 531 GIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           G Q     +AC  +I + G+    + A ++   M  +   S W + L A
Sbjct: 449 GCQ--FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS-WNSFLAA 494



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 7/205 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S     +G Q+H + +  G DS+  VAN+L+ MY KCG   DSRR+FD + ER 
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERD 615

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           + +WN++ + Y       EA+  ++ M  +G+ PNE +   ++NAC+ +G    G K   
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S   G          +VD+  + G+++ A     D+   PD V W+A++  C +H++ 
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735

Query: 179 DW----ALKLFQQMKSSEINPNMFT 199
           +     A KLF+   S+  N  M +
Sbjct: 736 EIGKRAAEKLFRIEPSNAGNYVMLS 760


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 289/802 (36%), Positives = 438/802 (54%), Gaps = 75/802 (9%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N ++  YAK G+  D+  LF  +P R V SWN+L S Y       +A+  F  M  SG  
Sbjct: 99  NIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS 158

Query: 94  -PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            PN F+    + +C   G   +  ++ G   K G+  D   A  +VDM+ + G ++ A  
Sbjct: 159 LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASK 218

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI-NPNMF------------- 198
            F  IE P +   N+++AG       D AL+LF+ M   ++ + NM              
Sbjct: 219 QFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREA 278

Query: 199 -----------------TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
                            TYTS+L ACA +     G+QLH  +I+     DP V   +V++
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVEL 338

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCG   EAR +F  + ++N ++W ++I G LQ G   E+  LF  M  E +  DQ  L
Sbjct: 339 YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFAL 398

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +T++   ++   + + +Q+H+LS+K+       I NSLI  Y KCG++++A  IF     
Sbjct: 399 ATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEE 458

Query: 362 VDLVACTSMITAYAQFG-----------------------LG--------EEALKLYLEM 390
            D+V+ T M+TAY+Q G                       LG        E+ LK+Y  M
Sbjct: 459 RDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAM 518

Query: 391 -QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
             ++++ PD     +L   CA++ A + G Q+  H +K G + DT   N+++ MY+KCG 
Sbjct: 519 LTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGR 578

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I +A + F  +  + +VSW+AMI G +QHG GK+A+++F  ML+ G  P++I+ V+VL +
Sbjct: 579 ISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H+GLV E K +F+ +++   + P  EH++CM+D+L RAG   EA  L+D MP +  A 
Sbjct: 639 CSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE 698

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWGALL A + + N E+ + AA+ LF ++   S  ++LL+ IYA AG   + A+VR+ M+
Sbjct: 699 VWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMR 758

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           D  +KK PG SW+EVK+KV+ F   D SH +   I  KLDE+ + + + GYV        
Sbjct: 759 DKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVR------- 811

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
              ES + ++  HHSEKLAVAFG++  P    I + KNLRIC DCHT  + IS +  RE 
Sbjct: 812 --TESLRSEI--HHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREF 867

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           ++RD  RFHHF+ GSCSCG YW
Sbjct: 868 VIRDAVRFHHFKGGSCSCGDYW 889



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 254/531 (47%), Gaps = 69/531 (12%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++ + N +++ YAK+G+L DA  +F  +   D+ SWN +++G         A++ F  
Sbjct: 92  EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151

Query: 188 MK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           M+ S +  PN FT+  A+K+C  +   E+  QL   L K   + DP V  G+VDM+ +CG
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211

Query: 247 S-------------------------------MDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           +                               +D A  +F  MPE+++++WN+++S   Q
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           +G   EA S+   M+  GV  D TT ++ L + A   ++G  KQ+HA  +++    D Y+
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +++++ Y KCG  ++A ++F      + V+ T +I  + Q+G   E+L+L+ +M+   +
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELM 391

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             D F  +++++ C+N       +Q+H   +K G        NSL++MYAKCG++ +A+ 
Sbjct: 392 TVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAES 451

Query: 456 AFSEIPDRGIVSWS-------------------------------AMIGGLAQHGRGKEA 484
            FS + +R IVSW+                               AM+G   QHG  ++ 
Sbjct: 452 IFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDG 511

Query: 485 LQMFGQML-EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           L+M+  ML E  V+P+ +T V++   C   G   +          K G+         +I
Sbjct: 512 LKMYSAMLTEKDVIPDWVTYVTLFRGCADMG-ANKLGDQITGHTVKVGLILDTSVMNAVI 570

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
            +  + G+  EA ++ D +  +   S W A++     Y    +G+ A E+ 
Sbjct: 571 TMYSKCGRISEARKIFDFLSRKDLVS-WNAMITG---YSQHGMGKQAIEIF 617



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 232/488 (47%), Gaps = 34/488 (6%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  NS++  YAK      +  LF+++PER VVSWN + S         EA+    +M   
Sbjct: 229 FCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNR 288

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+R +  + +S + ACA       G+++H   I+     D + A+A+V++YAK G  ++A
Sbjct: 289 GVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEA 348

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF  +   + VSW  +I G + +     +L+LF QM++  +  + F   + +  C+  
Sbjct: 349 RRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR 408

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE---------- 260
               L RQLH   +K       ++   L+ MYAKCG++  A  IF  M E          
Sbjct: 409 MDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGML 468

Query: 261 ---------------------KNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQ 298
                                +N+I WN ++  ++Q+G + +   ++  M  E  V  D 
Sbjct: 469 TAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDW 528

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T  T+ +  A   A  +  Q+   +VK     D  ++N++I  Y KCG + +A KIF  
Sbjct: 529 VTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDF 588

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S  DLV+  +MIT Y+Q G+G++A++++ +M  +   PD     ++L++C++    ++G
Sbjct: 589 LSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEG 648

Query: 419 KQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLA 476
           K     + +   +S      S +V++ A+ G++ +A     E+P +     W A++    
Sbjct: 649 KFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACK 708

Query: 477 QHGRGKEA 484
            HG  + A
Sbjct: 709 THGNNELA 716



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 177/338 (52%), Gaps = 32/338 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC     L  G Q+H  V+ +    D +VA+++V +YAKCG F ++RR+F ++ +R+ 
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNT 360

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW  L   ++      E++  F +M    +  ++F+L+++I+ C+   D  L R++H  
Sbjct: 361 VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSL 420

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS----------------- 164
           S+K G+   +  +N+L+ MYAK GNL++A ++F  +E  DIVS                 
Sbjct: 421 SLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKA 480

Query: 165 --------------WNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAG 209
                         WNA++   + H   +  LK++  M +  ++ P+  TY +  + CA 
Sbjct: 481 REFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCAD 540

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           M   +LG Q+    +K+ +  D  V   ++ MY+KCG + EAR IF  +  K+L++WN +
Sbjct: 541 MGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAM 600

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           I+G+ Q+G   +A  +F  M ++G   D  +   VL S
Sbjct: 601 ITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 192/446 (43%), Gaps = 66/446 (14%)

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR---------- 252
           AL++C         R LH  L+ + + S   +   L+  Y  CG++ +AR          
Sbjct: 34  ALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEP 93

Query: 253 ----------------------MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                                  +F  MP +++ +WN ++SG+ Q+G  ++A   F  M 
Sbjct: 94  NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153

Query: 291 REGVGFDQT-TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH- 348
           R G       T    +KS  +     V  Q+  L  K  F+ D  +   ++D + +CG  
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213

Query: 349 ------------------------------VEDAVKIFKESSAVDLVACTSMITAYAQFG 378
                                         V+ A+++F+     D+V+   M++A +Q G
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              EAL + ++M +R +  DS   +S L ACA LS+   GKQ+H  +I+     D +  +
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           ++V +YAKCG   +A R FS + DR  VSW+ +IGG  Q+G   E+L++F QM  + +  
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTV 393

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           +   L +++  C++   +  A+    S+  K G          +I +  + G  Q A  +
Sbjct: 394 DQFALATIISGCSNRMDMCLAR-QLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESI 452

Query: 559 VDTMPFQANASVWGALLGAARIYKNV 584
             +M  + +   W  +L A     N+
Sbjct: 453 FSSME-ERDIVSWTGMLTAYSQVGNI 477



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 37/320 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  C+++ D+ L  Q+H + + +G      ++NSL+ MYAKCGN  ++  +F ++ ER 
Sbjct: 401 IISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERD 460

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL--------------------SGIR------- 93
           +VSW  + + Y     + +A  FF  M                       G++       
Sbjct: 461 IVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLT 520

Query: 94  -----PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                P+  +  ++   CA  G + LG +I G+++K+G   D    NA++ MY+K G + 
Sbjct: 521 EKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRIS 580

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +   D+VSWNA+I G   H     A+++F  M      P+  +Y + L +C+
Sbjct: 581 EARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS 640

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMPEKNLI-A 265
              L + G+  +  ++K +    P +     +VD+ A+ G++ EA+ +   MP K     
Sbjct: 641 HSGLVQEGK-FYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEV 699

Query: 266 WNIVISGHLQNGGDMEAASL 285
           W  ++S   +  G+ E A L
Sbjct: 700 WGALLSA-CKTHGNNELAEL 718



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 68/342 (19%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ES 359
           L+  L+S  +  A+   + +H   V     S  ++ N+L+ AY  CG + DA  + + + 
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN----------------------- 396
           +  +++    M+  YA+ G   +A +L+  M  R++                        
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 397 ---------PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
                    P++F     + +C  L  +E   Q+   + KFGF  D      +V+M+ +C
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRC 210

Query: 448 GSIDDADRAFSEI-------------------------------PDRGIVSWSAMIGGLA 476
           G++D A + FS+I                               P+R +VSW+ M+  L+
Sbjct: 211 GAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALS 270

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPM 535
           Q GR +EAL +   M   GV  +  T  S L AC     +   K  H + +     I P 
Sbjct: 271 QSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPY 330

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               + M+++  + G F+EA  +  ++    N   W  L+G 
Sbjct: 331 VA--SAMVELYAKCGCFKEARRVFSSLR-DRNTVSWTVLIGG 369


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 285/769 (37%), Positives = 435/769 (56%), Gaps = 84/769 (10%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           +N  +  + + G   D+ RLF A+P RS  ++N++ + Y     L  A   F+ +     
Sbjct: 41  SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP---- 96

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKI---------------------HG------YSIKL 125
           RP+ +S +++++A A S      R +                     HG      +   L
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
             + D  S N ++  Y + G +E+A  +F      D +SWNA+++G V       A +LF
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELF 216

Query: 186 QQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
            +M   ++ + N+     A +     ++ E  R    + ++     D      +V  YA+
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRG----DMVEARRLFDAAPVR-----DVFTWTAVVSGYAQ 267

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G ++EAR +F  MPE+N ++WN +++ ++Q     EA  LF  M               
Sbjct: 268 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM--------------P 313

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            ++VAS+                         N+++  Y + G +E+A  +F      D 
Sbjct: 314 CRNVASW-------------------------NTMLTGYAQAGMLEEAKAVFDTMPQKDA 348

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVCSSLLNACANLSAYEQGKQVH 422
           V+  +M+ AY+Q G  EE L+L++EM      +N  +F C  +L+ CA+++A E G Q+H
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLH 406

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
             +I+ G+    F GN+L+ MY KCG+++DA  AF E+ +R +VSW+ MI G A+HG GK
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK 466

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EAL++F  M      P+ ITLV VL AC+H+GLV +   +F SM   FG+    EHY CM
Sbjct: 467 EALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCM 526

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           ID+LGRAG+  EA +L+  MPF+ ++++WGALLGA+RI++N E+G+ AAE +F +EPE +
Sbjct: 527 IDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENA 586

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
             +VLLSNIYAS+G W +  K+R  M++  +KK PG SWIEV++KV+TF+ GD  H   +
Sbjct: 587 GMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKE 646

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           +IYA L+++   + KAGYV   +  LHDVEE EKE +L +HSEKLAVA+G++  PPG  I
Sbjct: 647 KIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPI 706

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RV KNLR+C DCH +F++IS I  R I++RD NRFHHFR GSCSCG YW
Sbjct: 707 RVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 208/469 (44%), Gaps = 55/469 (11%)

Query: 18  HGIVVFTG--FD----SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           HG+V      FD     D    N ++  Y + G   ++R LF++  E   +SWN+L S Y
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGY 203

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V    + EA   F  M    +     S + M++  A  GD +  R++           D+
Sbjct: 204 VQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRL----FDAAPVRDV 255

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F+  A+V  YA+ G LE+A  VF  +   + VSWNA++A  +     D A +LF  M   
Sbjct: 256 FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 315

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
               N+ ++ + L                                     YA+ G ++EA
Sbjct: 316 ----NVASWNTMLTG-----------------------------------YAQAGMLEEA 336

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           + +F  MP+K+ ++W  +++ + Q G   E   LF  M R G   +++  + VL + A  
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+    Q+H   ++  +    ++ N+L+  Y KCG++EDA   F+E    D+V+  +MI
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGF 430
             YA+ G G+EAL+++  M+     PD      +L AC++    E+G      +   FG 
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            +       ++++  + G + +A     ++P +     W A++G    H
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/472 (21%), Positives = 202/472 (42%), Gaps = 68/472 (14%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++  +N  +  + + G + DA  +F  +      ++NA++AG   +     A  LF+ 
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +      P+ ++Y + L A A        R L     +M ++      V ++  +A  G 
Sbjct: 95  IP----RPDNYSYNTLLHALAVSSSLADARGL---FDEMPVRDSVTYNV-MISSHANHGL 146

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +  AR  F L PEK+ ++WN +++ +++NG   EA  LF         +D  + + ++  
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDAISWNALMSG 202

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
              +  +   +++           D    N ++  Y + G + +A ++F  +   D+   
Sbjct: 203 YVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTW 258

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T++++ YAQ G+ EEA +++  M +R          + ++  A ++AY Q + +      
Sbjct: 259 TAVVSGYAQNGMLEEARRVFDAMPER----------NAVSWNAMVAAYIQRRMMDEAKEL 308

Query: 428 FGFMS--DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           F  M   +  + N+++  YA+ G +++A   F  +P +  VSW+AM+   +Q G  +E L
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACN-----------HAGLV------------------ 516
           Q+F +M   G   N      VL  C            H  L+                  
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428

Query: 517 ------AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
                  +A++ FE ME++  +      +  MI    R G  +EA+E+ D M
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVS-----WNTMIAGYARHGFGKEALEIFDMM 475



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 7/214 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L  G+Q+HG ++  G+    FV N+L+ MY KCGN  D+R  F+ + ER 
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 448

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VVSWN++ + Y    F +EA+  F  M  +  +P++ +L  ++ AC+ SG  L+ + I +
Sbjct: 449 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG--LVEKGISY 506

Query: 120 GYSI--KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            YS+    G  +       ++D+  + G L +A  + KD+   PD   W A++    +H 
Sbjct: 507 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 566

Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           + +      +++   E  N  M+   S + A +G
Sbjct: 567 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 600


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 296/752 (39%), Positives = 442/752 (58%), Gaps = 48/752 (6%)

Query: 47  IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC 106
           ++S+     I +  +V WN   S Y+     E A+  F  M     R +  + ++MI+  
Sbjct: 46  LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGY 101

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN 166
             +      RK+     +   D D+ S N ++  Y K GNL  A A+F  +   D+VSWN
Sbjct: 102 LSNNKFDCARKV----FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN 157

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           A+++G   +   + A K+F QM    +  N  ++   L A       E  R+L  S +  
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW 213

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
           EI S   +  G    Y +   +D+AR +F  MP ++ I+WNI+I+G+ QNG   EA  LF
Sbjct: 214 EIVSWNCLMGG----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269

Query: 287 PWMYREGV--------GFDQTTL---STVL------KSVASFQAIGVCKQVHALSVKTAF 329
             +    V        GF Q  +   +T +      K+  S+ A+ +   V +  ++ A 
Sbjct: 270 EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM-IAGYVQSQQIEKAR 328

Query: 330 ESDDYIV-------NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           E  D +        N+++  Y +CG+++ A  +F E    D ++  +MI+ YAQ G  EE
Sbjct: 329 ELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEE 388

Query: 383 ALKLYLEMQDRE---INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           AL L+++M+ R+   +N  +  C+  L++CA ++A E GKQ+H  ++K GF +   AGN+
Sbjct: 389 ALHLFIKMK-RDGGILNRSALACA--LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L+ MY KCGSI++A   F +I ++ IVSW+ MI G A+HG GKEAL +F  M +  + P+
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPD 504

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +TLV VL AC+H G V +   +F SM + +GI    +HY CMID+LGRAG+  EA+ L+
Sbjct: 505 DVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLM 564

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
            +MPF  +A+ WGALLGA+RI+ + E+G+ AAE +F +EP+ S  +VLLSN+YA++G W 
Sbjct: 565 KSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWR 624

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            V ++R  M+D  +KK PG SW+E+++K + FTVGD SH  ++ IYA L+E+   L K G
Sbjct: 625 EVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDG 684

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +V   +  LHDVEE EKE +L +HSEKLAVAFG+++ PPG  IRV KNLR+C DCH + +
Sbjct: 685 FVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIK 744

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  R+IIVRD NRFHHF  GSCSCG YW
Sbjct: 745 HISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 240/482 (49%), Gaps = 42/482 (8%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D    N ++  Y K GN   +R LF+ +PE+ VVSWN++ S +    F+EEA   F +
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH----------------GYSIKLGYDS- 129
           M++     NE S + +++A   +G     R++                 GY  K   D  
Sbjct: 179 MLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234

Query: 130 ----------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                     D  S N ++  YA+ G L +A  +F+++   D+ +W A+++G V +   D
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A ++F++M       N  ++ + +      +  E  R+L   +      S   +  G  
Sbjct: 295 EATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-- 348

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
             YA+CG++D+A+++F  MP+++ I+W  +ISG+ Q+G   EA  LF  M R+G   +++
Sbjct: 349 --YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            L+  L S A   A+ + KQ+H   VK  F++     N+L+  YGKCG +E+A  +F++ 
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D+V+  +MI  YA+ G G+EAL L+  M+   I PD      +L+AC++    ++G 
Sbjct: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVDKGM 525

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
           +    + + +G  ++      ++++  + G +D+A      +P      +W A++G    
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 585

Query: 478 HG 479
           HG
Sbjct: 586 HG 587



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 125/233 (53%), Gaps = 14/233 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C     L LG Q+HG +V  GF +     N+L+ MY KCG+  ++  +F+ I E+ +
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ + Y    F +EA+  F+ M ++ I+P++ +L  +++AC+ +G   + + +  +
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTG--FVDKGMEYF 528

Query: 122 SIKLGYDSDMFSANA-----LVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
           +    Y +   +ANA     ++D+  + G L++A+ + K +  +PD  +W A++    +H
Sbjct: 529 NSM--YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 176 EHNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG--MELKELGRQLHCSLIK 225
              +   K  +++   E  N  M+   S L A +G   E++E+  ++    +K
Sbjct: 587 GDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/698 (39%), Positives = 407/698 (58%), Gaps = 13/698 (1%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+   + PN ++    + AC+   D   GR IH ++I  G  +D+F + AL+DMY K   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLH--EHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           L DA  +F  +   D+V+WNA++AG   H   H+  A  L  QM+   + PN  T  + L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 205 KACAGMELKELGRQLHCSLI----------KMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
              A       G  +H   I          K ++    ++G  L+DMYAKCGS+  AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQA 313
           F  MP +N + W+ +I G +      +A  LF  M  +G+ F   T++++ L++ AS   
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + +Q+HAL  K+   +D    NSL+  Y K G ++ A+ +F E +  D V+ +++++ 
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q G  EEA  ++ +MQ   + PD+    SL+ AC++L+A + G+  H  +I  G  S+
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           T   N+L++MYAKCG ID + + F+ +P R IVSW+ MI G   HG GKEA  +F +M  
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G  P+ +T + +L AC+H+GLV E KH F  M   +G+ P  EHY CM+D+L R G   
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA E + +MP +A+  VW ALLGA R+YKN+++G+  + M+  + PE +   VLLSNIY+
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           +AG +D  A+VR   K    KK PG SWIE+   ++ F  GD+SH +S EIY +LD +  
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            + K GY P     L D+EE EKE+ L  HSEKLA+A+G+++     TI V KNLR+C D
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 660

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CHT  + IS +  R IIVRD NRFHHF+NG CSCG +W
Sbjct: 661 CHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 258/517 (49%), Gaps = 26/517 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC++  D   G  +H   +  G  +D FV+ +L+ MY KC    D+  +F  +P R +
Sbjct: 17  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 76

Query: 62  VSWNSLFSCYVHCDFLEEAVCFF--KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V+WN++ + Y H      AV      +M +  +RPN  +L +++   A  G    G  +H
Sbjct: 77  VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 136

Query: 120 GYSIKLGYDSDMFS----------ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            Y I+     +  S            AL+DMYAK G+L  A  VF  +   + V+W+A+I
Sbjct: 137 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALI 196

Query: 170 AGCVLHEHNDWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
            G VL      A  LF+ M +     ++P   +  SAL+ACA ++   +G QLH  L K 
Sbjct: 197 GGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKS 254

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            + +D   G  L+ MYAK G +D+A  +F  M  K+ ++++ ++SG++QNG   EA  +F
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 314

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M    V  D  T+ +++ + +   A+   +  H   +     S+  I N+LID Y KC
Sbjct: 315 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 374

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSS 404
           G ++ + ++F    + D+V+  +MI  Y   GLG+EA  L+LEM +    PD  +F+C  
Sbjct: 375 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC-- 432

Query: 405 LLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           LL+AC++     +GK   HV    +G          +V++ ++ G +D+A      +P R
Sbjct: 433 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 492

Query: 464 GIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGV 496
             V  W A++G    +     GK+  +M  ++  +G 
Sbjct: 493 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 529



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+    L  G   HG V+  G  S+  + N+L+ MYAKCG    SR++F+ +P R 
Sbjct: 332 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 391

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           +VSWN++ + Y      +EA   F EM   G  P+  +   +++AC+ SG  + G+    
Sbjct: 392 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFH 451

Query: 119 ---HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
              HGY    G    M     +VD+ ++ G L++A    + +    D+  W A++  C +
Sbjct: 452 VMGHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507

Query: 175 HEHNDWALKLFQQMKSSEINP 195
           +++ D   K+ + ++  E+ P
Sbjct: 508 YKNIDLGKKVSRMIQ--ELGP 526


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/743 (37%), Positives = 429/743 (57%), Gaps = 10/743 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAV-CFFKEMVLS 90
           ++  LV +Y   GN   +R  FD I  R V +WN + S Y       E + CF   M+ S
Sbjct: 88  ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+ P+  +  S++ AC    D   G KIH  ++K G+  D++ A +L+ +Y++   + +A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +F ++   D+ SWNA+I+G     +   AL L   +++ +      T  S L AC   
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEA 260

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                G  +H   IK  ++S+  V   L+D+YA+ G + + + +F  M  ++LI+WN +I
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-F 329
             +  N   + A SLF  M    +  D  TL ++   ++    I  C+ V   +++   F
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D  I N+++  Y K G V+ A  +F      D+++  ++I+ YAQ G   EA+++Y  
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440

Query: 390 MQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           M++  EI  +     S+L AC+   A  QG ++H  ++K G   D F   SL +MY KCG
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ++DA   F +IP    V W+ +I     HG G++A+ +F +ML++GV P+HIT V++L 
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H+GLV E +  FE M+  +GI P  +HY CM+D+ GRAG+ + A++ + +M  Q +A
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           S+WGALL A R++ NV++G+ A+E LF +EPE    HVLLSN+YASAG W+ V ++R   
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
               L+K PG S +EV +KV  F  G+++H   +E+Y +L  +   L   GYVP     L
Sbjct: 681 HGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVL 740

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
            DVE+ EKE +L  HSE+LA+AF LIATP   TIR+ KNLR+C DCH+  +FISKI  RE
Sbjct: 741 QDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITERE 800

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD NRFHHF+NG CSCG YW
Sbjct: 801 IIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/491 (32%), Positives = 260/491 (52%), Gaps = 27/491 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC +  D   G ++H + +  GF  D +VA SL+ +Y++     ++R LFD +P R 
Sbjct: 159 VLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIH 119
           + SWN++ S Y      +EA+      + +G+R  +  ++ S+++AC  +GD   G  IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            YSIK G +S++F +N L+D+YA+ G L D   VF  +   D++SWN++I    L+E   
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC------SLIKMEIKSDPI 233
            A+ LFQ+M+ S I P+  T  S         L +LG    C      +L K     D  
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASI-----LSQLGDIRACRSVQGFTLRKGWFLEDIT 385

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +G  +V MYAK G +D AR +F+ +P  ++I+WN +ISG+ QNG   EA  ++  M  EG
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445

Query: 294 -VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  +Q T  +VL + +   A+    ++H   +K     D ++V SL D YGKCG +EDA
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           + +F +   V+ V   ++I  +   G GE+A+ L+ EM D  + PD     +LL+AC++ 
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565

Query: 413 SAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA---DRAFSEIPDRGIVSW 468
              ++G+    +    +G          +V+MY + G ++ A    ++ S  PD  I  W
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI--W 623

Query: 469 SAMIGGLAQHG 479
            A++     HG
Sbjct: 624 GALLSACRVHG 634



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 160/321 (49%), Gaps = 19/321 (5%)

Query: 189 KSSEINP--NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +S EI+    +F Y + L++          + LH  L+  +   +  +   LV++Y   G
Sbjct: 50  ESKEIDDVHTLFRYCTNLQS---------AKCLHARLVVSKQIQNVCISAKLVNLYCYLG 100

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP-WMYREGVGFDQTTLSTVL 305
           ++  AR  F  +  +++ AWN++ISG+ + G   E    F  +M   G+  D  T  +VL
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL 160

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           K+    + +    ++H L++K  F  D Y+  SLI  Y +   V +A  +F E    D+ 
Sbjct: 161 KAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           +  +MI+ Y Q G  +EAL L   ++      DS    SLL+AC     + +G  +H + 
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYS 273

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK G  S+ F  N L+++YA+ G + D  + F  +  R ++SW+++I     + +   A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333

Query: 486 QMFGQMLEDGVLPNHITLVSV 506
            +F +M    + P+ +TL+S+
Sbjct: 334 SLFQEMRLSRIQPDCLTLISL 354



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 2/181 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G+++HG ++  G   D FV  SL  MY KCG   D+  LF  IP  +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
            V WN+L +C+      E+AV  FKEM+  G++P+  +  ++++AC+ SG    G+    
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
                 G    +     +VDMY + G LE A+   K +   PD   W A+++ C +H + 
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636

Query: 179 D 179
           D
Sbjct: 637 D 637



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%)

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           +L   C NL   +  K +H  ++    + +      LVN+Y   G++  A   F  I +R
Sbjct: 59  TLFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQ-MLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
            + +W+ MI G  + G   E ++ F   ML  G+ P++ T  SVL AC    ++   K H
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIH 173

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              +  KFG        A +I +  R      A  L D MP +   S W A++
Sbjct: 174 --CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMI 223


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 280/761 (36%), Positives = 434/761 (57%), Gaps = 13/761 (1%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER-SVVSWNSLFSCYVHC 74
            + HG +  +G+  D  V N+++ MYAKCG F  +  +F  I  +  V+SWN++       
Sbjct: 356  KFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDR 415

Query: 75   DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS- 133
                + V  F  M+L+GI PN+ S  +++NAC+ S     GRKIH   +    D    S 
Sbjct: 416  KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSV 475

Query: 134  ANALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
            A  LV MY K G++ +A  VFK++  P   +V+WN ++     ++ +  A     +M   
Sbjct: 476  ATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQG 535

Query: 192  EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
             + P+  ++TS L +C   +  ++   L   +++   +S   +   L+ M+ +C  +++A
Sbjct: 536  GVLPDALSFTSVLSSCYCSQEAQV---LRMCILESGYRS-ACLETALISMHGRCRELEQA 591

Query: 252  RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
            R +F  M   ++++W  ++S   +N    E   LF  M  EGV  D+ TL+T L +    
Sbjct: 592  RSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDS 651

Query: 312  QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
              +G+ K +HA   +   E+D  + N+L++ Y  CG   +A+  F+   A DLV+   M 
Sbjct: 652  TTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMS 711

Query: 372  TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
             AYAQ GL +EA+ L+  MQ   + PD    S+ LN     +    GK  H    + G  
Sbjct: 712  AAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLD 771

Query: 432  SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            SD      LV +YAKCG +D+A   F       +V  +A+IG LAQHG  +EA++MF +M
Sbjct: 772  SDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKM 831

Query: 492  LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
             ++GV P+  TLVS++ AC HAG+V E    F +M++ FGI P  EHYAC +D+LGRAG+
Sbjct: 832  QQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQ 891

Query: 552  FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
             + A +++  MPF+ N  VW +LLG  ++  + E+G+  A+ +  ++P  S+ HV+LSNI
Sbjct: 892  LEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNI 951

Query: 612  YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV 671
            Y + G W +    R+ + D  +K  PGMSW+E+  +V+ F  GDRSH ++ EIY  LD++
Sbjct: 952  YCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKL 1011

Query: 672  SDLLNKAGYVPMVETDLH-DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRI 730
              L+ +AGY    E D   D E+  KE+ L +HSE++A+AFGLIATPP  T+++ KNLR+
Sbjct: 1012 ELLMRRAGY----EADKGLDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRV 1067

Query: 731  CVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            C DCHT+ ++IS I+ REIIVRD  RFHHF NG+CSC   W
Sbjct: 1068 CGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 315/607 (51%), Gaps = 38/607 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C    DL  G + H ++   G +   F+ N L+ MY +CG+  ++  +F  + ER+
Sbjct: 31  LLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERN 90

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSW +L S          A   F+ M+L S   PN ++L +M+NACA S D  +GR IH
Sbjct: 91  VVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIH 150

Query: 120 GYSIKLGYDSDMFSA----NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
               +LG + +  +A    NA+++MYAK G+ EDA+AVF  I   D+VSW A +AG    
Sbjct: 151 AMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTA-MAGAYAQ 209

Query: 176 EHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           E   +  AL++F++M    + PN+ T+ +AL AC  +     G  LH  L +  +  DP+
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAGLGFDPL 266

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMP---EKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
            G  L++MY KCG  + A  +F  M    E +L++WN +IS  ++ G   +A ++F  + 
Sbjct: 267 AGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 291 REGVGFDQTTLSTVLKSVASFQA-IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            EG+  +  TL T+L ++A+     G  ++ H    ++ +  D  + N++I  Y KCG  
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFF 386

Query: 350 EDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
             A  +F+      D+++  +M+ A        + +  +  M    I+P+     ++LNA
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446

Query: 409 CANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE--IPDRG 464
           C+N  A + G+++H  I+  +  ++  + A   LV+MY KCGSI +A+  F E  +P R 
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVA-TMLVSMYGKCGSIAEAELVFKEMPLPSRS 505

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +V+W+ M+G  AQ+ R KEA     +ML+ GVLP+ ++  SVL +C  +          E
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ---------E 556

Query: 525 SMEKKFGIQPMQEHYAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA-- 578
           +   +  I       AC    +I + GR  + ++A  + D M    +   W A++ A   
Sbjct: 557 AQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMD-HGDVVSWTAMVSATAE 615

Query: 579 -RIYKNV 584
            R +K V
Sbjct: 616 NRDFKEV 622



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 263/537 (48%), Gaps = 33/537 (6%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           ++++ +C  S D   G++ H      G +  +F  N L++MY + G+LE+A A+F  +E 
Sbjct: 29  TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQ 218
            ++VSW A+I+          A  LF+ M   S   PN +T  + L ACA      +GR 
Sbjct: 89  RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 219 LHCSL----IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           +H  +    ++ E  +  +VG  +++MYAKCGS ++A  +F  +PEK++++W  +   + 
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYA 208

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF-QAIGVCKQ------VHALSVKT 327
           Q          +P   R    F +  L  +  +V +F  A+G C        +H+L  + 
Sbjct: 209 QE------RRFYPDALRI---FREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEA 259

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA---VDLVACTSMITAYAQFGLGEEAL 384
               D    N+LI+ YGKCG  E A  +FK  ++   +DLV+  +MI+A  + G   +A+
Sbjct: 260 GLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAM 319

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSA-YEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
            ++  ++   + P+S    ++LNA A     +   ++ H  I + G++ D   GN++++M
Sbjct: 320 AIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISM 379

Query: 444 YAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           YAKCG    A   F  I  +  ++SW+ M+G         + +  F  ML  G+ PN ++
Sbjct: 380 YAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVS 439

Query: 503 LVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACM-IDILGRAGKFQEAMELVD 560
            +++L AC N   L    K H   + ++     ++   A M + + G+ G   EA  +  
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLILTRRR--DYVESSVATMLVSMYGKCGSIAEAELVFK 497

Query: 561 TMPFQANASV-WGALLGA-ARIYKNVEVGQHAAEML-FAIEPEKSSTHVLLSNIYAS 614
            MP  + + V W  +LGA A+  ++ E      EML   + P+  S   +LS+ Y S
Sbjct: 498 EMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS 554



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 211/421 (50%), Gaps = 14/421 (3%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           YT+ L++C        G++ H  +    ++    +G  L++MY +CGS++EA  IF  M 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT-TLSTVLKSVASFQAIGVCK 318
           E+N+++W  +IS + Q+G    A +LF  M  E      + TL  +L + A+ + + + +
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 319 QVHALSVKTAFESDD----YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            +HA+  +   E +      + N++I+ Y KCG  EDA+ +F      D+V+ T+M  AY
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 375 AQ-FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           AQ      +AL+++ EM  + + P+     + L AC +L     G  +H  + + G   D
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAGLGFD 264

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDR---GIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             AGN+L+NMY KCG  + A   F  +  R    +VSW+AMI    + GR  +A+ +F +
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           +  +G+ PN +TL+++L A   +G+   A   F     + G          +I +  + G
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCG 384

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNV-EVGQHAAEMLFA-IEPEKSSTHVLL 608
            F  A  +   + ++ +   W  +LGA+   K+  +V      ML A I+P K S   +L
Sbjct: 385 FFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAIL 444

Query: 609 S 609
           +
Sbjct: 445 N 445



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L  C     L LG  +H  V   G ++D  V N+L+ MY+ CG++ ++   F+ +  R 
Sbjct: 644 TLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARD 703

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN + + Y      +EAV  F+ M L G++P++ + S+ +N   GS     G+  HG
Sbjct: 704 LVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHG 763

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + + G DSD+  A  LV +YAK G L++A+++F+      +V  NA+I     H  ++ 
Sbjct: 764 LAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEE 823

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS---LIKMEIKSDPIVG-- 235
           A+K+F +M+   + P++ T  S + AC    + E G    CS    +K      P +   
Sbjct: 824 AVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG----CSSFLTMKEYFGISPTLEHY 879

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
              VD+  + G ++ A  I   MP E N + W  ++ G  +  GD E
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL-GTCKLQGDAE 925



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 169/346 (48%), Gaps = 27/346 (7%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D    + +L+S      +   K+ H L      E   ++ N LI+ Y +CG +E+A  IF
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAY 415
            +    ++V+ T++I+A AQ G    A  L+  M  +    P+S+   ++LNACAN    
Sbjct: 84  SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143

Query: 416 EQGKQVHVHIIKFGF----MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
             G+ +H  I + G      + T  GN+++NMYAKCGS +DA   F  IP++ +VSW+AM
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203

Query: 472 IGGLAQHGR-GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
            G  AQ  R   +AL++F +ML   + PN IT ++ L AC    L      H    E   
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT--SLRDGTWLHSLLHEAGL 261

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV--WGALLGAARIYKNVEVGQ 588
           G  P+  +   +I++ G+ G ++ A  +   M  +    +  W A++ A     +VE G+
Sbjct: 262 GFDPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA-----SVEAGR 314

Query: 589 HAAEM-------LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           H   M       L  + P  S T + + N  A++G+  +    R+F
Sbjct: 315 HGDAMAIFRRLRLEGMRP-NSVTLITILNALAASGV--DFGAARKF 357


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/716 (38%), Positives = 424/716 (59%), Gaps = 38/716 (5%)

Query: 92  IRPNEFSLSSMINA---CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           + P+EF+  +  NA   C    +   G+ +H   +K G   D+F+ N L++MY K   L 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKA 206
           DA  +F ++   + +S+  +I G         A++LF ++  +  E+NP  F +T+ LK 
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNP--FVFTTILKL 148

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
               +  ELG  +H  + K+  +S+  VG  L+D Y+ CG +D AR +F  +  K++++W
Sbjct: 149 LVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSW 208

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +++   +N    EA  LF  M   G   +  T ++V K+    +A  V K VH  ++K
Sbjct: 209 TGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALK 268

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           + +E D Y+  +L+D Y K G ++DA + F+E    D++  + MI  YAQ    +EA+++
Sbjct: 269 SRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEM 328

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + +M+   + P+ F  +S+L ACA +     G Q+H H+IK G  SD F  N+L+++YAK
Sbjct: 329 FFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK 388

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED------------ 494
           CG ++++   F+E P R  V+W+ +I G  Q G G++AL++F  MLE             
Sbjct: 389 CGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSA 448

Query: 495 -------------------GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
                               V P+ +T V VL AC +AGL+ + + +F SM +  GI+P 
Sbjct: 449 LRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 508

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+ +LGR G   +A++L+D +PFQ +  VW ALLGA  I+ ++E+G+ +A+ + 
Sbjct: 509 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVL 568

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP+  +THVLLSN+YA+A  WDNVA VR+ MK   +KKEPG+SWIE +  V++FTVGD
Sbjct: 569 EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 628

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            SH   + I   L+ +     KAGY+P     L DVE+ EKE+LL+ HSE+LA++FG+I 
Sbjct: 629 TSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIR 688

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TP G+ IR+ KNLRICVDCH + + ISK+V REI+VRD+NRFHHF+ G CSCG YW
Sbjct: 689 TPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 270/514 (52%), Gaps = 12/514 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+ C  K +   G  +H  ++  G   D F  N L+ MY K     D+ +LFD +PER+ 
Sbjct: 45  LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +S+ +L   Y       EA+  F  +   G   N F  ++++     +    LG  IH  
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHAC 164

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             KLG++S+ F   AL+D Y+  G ++ A  VF  I + D+VSW  ++     ++    A
Sbjct: 165 IFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEA 224

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           LKLF QM+     PN FT+ S  KAC G+E  ++G+ +H   +K   + D  VGV L+D+
Sbjct: 225 LKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDL 284

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K G +D+AR  F  +P+K++I W+ +I+ + Q+    EA  +F  M +  V  +Q T 
Sbjct: 285 YTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTF 344

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           ++VL++ A+ + + +  Q+H   +K    SD ++ N+L+D Y KCG +E+++++F ES  
Sbjct: 345 ASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPH 404

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            + V   ++I  + Q G GE+AL+L+L M +  +       SS L ACA+L+A E G Q+
Sbjct: 405 RNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQI 464

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF-SEIPDRGIVS----WSAMIGGLA 476
           H   +K   +  TF G  +++  A  G +D     F S I D GI      ++ M+  L 
Sbjct: 465 HSLTVKPDKL--TFVG--VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLG 520

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + G   +A+++  ++      P+ +   ++L AC
Sbjct: 521 RGGHLDKAVKLIDEI---PFQPSVMVWRALLGAC 551



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 240/472 (50%), Gaps = 17/472 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK   S     LG  +H  +   G +S+ FV  +L+  Y+ CG    +R +FD I  + 
Sbjct: 145 ILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKD 204

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + +C+   D  +EA+  F +M + G +PN F+ +S+  AC G     +G+ +HG
Sbjct: 205 MVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHG 264

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K  Y+ D++   AL+D+Y K G+++DA   F++I   D++ W+ +IA     + +  
Sbjct: 265 CALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKE 324

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+++F QM+ + + PN FT+ S L+ACA ME   LG Q+HC +IK+ + SD  V   L+D
Sbjct: 325 AVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 384

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG M+ +  +F   P +N + WN VI GH+Q G   +A  LF  M    V   + T
Sbjct: 385 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 444

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+ L++ AS  A+    Q+H+L+VK     D      ++ A    G ++     F  +S
Sbjct: 445 YSSALRACASLAALEPGLQIHSLTVK----PDKLTFVGVLSACANAGLLDQGQAYF--TS 498

Query: 361 AVD---LVAC----TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +    +  C    T M+    + G  ++A+KL  E+      P   V  +LL AC   +
Sbjct: 499 MIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHN 555

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
             E G+     +++     D      L NMYA     D+       +  +G+
Sbjct: 556 DIELGRISAQRVLEME-PQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGV 606


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 289/808 (35%), Positives = 432/808 (53%), Gaps = 76/808 (9%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           F  N+++          D+ +LFD +P R    VSW ++ S Y    F   +   F  M+
Sbjct: 75  FTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMI 134

Query: 89  L----SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
                 G   + FS +S++ AC   GDS L  ++H    KLG+  +    N++V MY K 
Sbjct: 135 RDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKC 194

Query: 145 GNLEDAVAVFKDIEHP-------------------------------DIVSWNAVIAGCV 173
           G+++ A  VF DIE P                               D VSWN +I+   
Sbjct: 195 GDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFS 254

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
            H      L +F +M +   +PN  TY S L ACA     + G  LH  +++ME   D +
Sbjct: 255 QHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLV 314

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
            G GL+DMYAKCG +D A+ +F  + E + I+WN +I+G +  G   +A  LF  M R  
Sbjct: 315 FGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSS 374

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  D+  L T+L   +        + +H  ++K+   S   + N++I  Y KCG  + A 
Sbjct: 375 VVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKAD 434

Query: 354 KIFKESSAVDLVACTSMITA-------------------------------YAQFGLGEE 382
            +F+     + ++ T+MITA                               Y Q G  EE
Sbjct: 435 LVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEE 494

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
            LKLY+ M+   + PD    ++ + ACA+L+  + G QV  H  KFG   +    NS+V 
Sbjct: 495 GLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVT 554

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY++CG I +A   F  I D+ ++SW+AM+   AQ+G G + +  F  ML+    PNHI+
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            VSVL  C+H GLVAE KH+F+SM + FGI P  EH++CM+D+LGRAG  ++A +L++ M
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGM 674

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           PF+ NA+VW ALLG+ R++ ++ + + AA+ L  ++ E S  +VLLSN+Y+ +G  DNVA
Sbjct: 675 PFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVA 734

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            +R+ MK   ++   G SWIEV ++V+ FTV + SH + KE+Y KL+E+  ++   G   
Sbjct: 735 DMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYI 794

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
            VE+ +H    S+K     +HSEKLA AFGL+  P    I V KNLR+C DCH   + +S
Sbjct: 795 TVESSVH---RSKK-----YHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLS 846

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGY 770
            + SRE+I+RD  RFHHF++G CSC  Y
Sbjct: 847 LVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 251/542 (46%), Gaps = 64/542 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN-------FIDSRR-- 51
           V+KAC S  D  L +Q+H +V   GF  +  + NS+V MY KCG+       F D  R  
Sbjct: 152 VMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPS 211

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 +F+ +PER  VSWN+L S +    F  + +  F EM  
Sbjct: 212 LFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCN 271

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  PN  +  S+++ACA + D   G  +H   +++ +  D+   N L+DMYAK G L+ 
Sbjct: 272 QGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDL 331

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VFK +   D +SWN++I G V     + AL LF QM+ S +  + F   + L  C+G
Sbjct: 332 AKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSG 391

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL------------ 257
            +    G  LH   IK  + S   VG  ++ MYAKCG  D+A ++F L            
Sbjct: 392 PDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAM 451

Query: 258 -------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
                              MPE+N++ WN ++S ++QNG   E   L+  M   GV  D 
Sbjct: 452 ITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDW 511

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T +T +++ A    + +  QV   + K     +  + NS++  Y +CG +++A   F  
Sbjct: 512 ITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDS 571

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               DL++  +M+ A+AQ GLG + +  + +M   E  P+     S+L+ C+++    +G
Sbjct: 572 IDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEG 631

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLA 476
           K     + + FG        + +V++  + G ++ A      +P +     WSA++G   
Sbjct: 632 KHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCR 691

Query: 477 QH 478
            H
Sbjct: 692 VH 693



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 244/563 (43%), Gaps = 101/563 (17%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           + RK+H   I  G DS +F  N L+ MY+  G   DA  VF++  H +I +WN +I   V
Sbjct: 26  IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85

Query: 174 LHEHNDWALKLFQQM------------------------KSSEI-------------NPN 196
                  A KLF +M                        +S E              N +
Sbjct: 86  SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD------- 249
            F++TS +KAC  +    L  QLH  + K+    +  +   +V MY KCG +D       
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205

Query: 250 ------------------------EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
                                   +A  IF+ MPE++ ++WN +IS   Q+G  ++  ++
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M  +G   +  T  +VL + AS   +     +HA  ++     D    N LID Y K
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG ++ A ++FK     D ++  S+IT    FGLGE+AL L+ +M+   +  D F+  ++
Sbjct: 326 CGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD----------- 454
           L  C+       G+ +H + IK G  S    GN+++ MYAKCG  D AD           
Sbjct: 386 LGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT 445

Query: 455 -------RAFSE-------------IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
                   AFS              +P+R IV+W++M+    Q+G  +E L+++  M  +
Sbjct: 446 ISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSN 505

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           GV P+ IT  + + AC    +V +      +   KFG+         ++ +  R G  +E
Sbjct: 506 GVQPDWITFTTSIRACADLAIV-KLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKE 564

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A    D++  +   S W A+L A
Sbjct: 565 AKNTFDSIDDKDLIS-WNAMLAA 586



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 226/531 (42%), Gaps = 89/531 (16%)

Query: 200 YTSALKACA-GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           +  A K C+   +   + R+LH  LI   + S   +   L+ MY+ CG   +A  +F   
Sbjct: 10  FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69

Query: 259 PEKNLIAWN---------------------------------IVISGHLQNGGDMEAASL 285
             +N+  WN                                  +ISG+ QNG    +   
Sbjct: 70  HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129

Query: 286 FPWMYRE----GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
           F  M R+    G  +D  + ++V+K+  S     +  Q+HAL  K  F  +  I NS++ 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 342 AYGKCGHVE-------------------------------DAVKIFKESSAVDLVACTSM 370
            Y KCG V+                                A++IF      D V+  ++
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I+ ++Q G G + L +++EM ++  +P+     S+L+ACA+ S  + G  +H  I++   
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             D   GN L++MYAKCG +D A R F  + +   +SW+++I G+   G G++AL +F Q
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M    V+ +   L ++L  C+     A           K G+         +I +  + G
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPD-YASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCG 428

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS--STHVLL 608
              +A  +   MP + N   W A++ A    ++ ++G+  A   F + PE++  + + +L
Sbjct: 429 DTDKADLVFRLMPLR-NTISWTAMITA--FSRSGDIGK--ARGYFDMMPERNIVTWNSML 483

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           S  Y   G  +   K+   M+ N ++ +    WI       TFT   R+ A
Sbjct: 484 ST-YVQNGFSEEGLKLYVSMRSNGVQPD----WI-------TFTTSIRACA 522


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/711 (36%), Positives = 417/711 (58%), Gaps = 37/711 (5%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P    L+ ++ A   +G     R++   +       ++F+ NAL+   A    L+D  ++
Sbjct: 39  PPTHLLNHLLTAYGKAGRHARARRVFDATPH----PNLFTYNALLSTLAHARLLDDMDSL 94

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKACAGME 211
           F  +   D VS+NAVIAG      +  A++L+  +    S + P+  T ++ + A + + 
Sbjct: 95  FASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALG 154

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK--------------------------- 244
            + LGRQ HC ++++    +  VG  LV MYAK                           
Sbjct: 155 DRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMIT 214

Query: 245 ----CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
               C  ++EAR +F +M +++ I W  +++G  QNG + +A + F  M  +G+  DQ T
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYT 274

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L +  +  A+   KQ+HA  ++T ++ + ++ ++L+D Y KC  ++ A   F+  S
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++++ T++I  Y Q G  EEA++++ EMQ   I+PD F   S++++CANL++ E+G Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ 394

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H   +  G M      N+LV +Y KCGSI+DA R F E+     VSW+A++ G AQ GR
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGR 454

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE + +F +ML   V P+ +T + VL AC+ AG V +   +F SM+K  GI P+ +HY 
Sbjct: 455 AKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYT 514

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+  R+G+ +EA E +  MP   +A  WG LL A R+  ++E+GQ AAE L  I+P+
Sbjct: 515 CMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQ 574

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             +++VLL +++A+ G W+ VA++RR M+D ++KKEPG SWI+ K+KV+ F+  D+SH  
Sbjct: 575 NPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 634

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           SK IY KL+ ++  + + GY P V + LHDV +++K  ++ HHSEKLA+AFGL+  P   
Sbjct: 635 SKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEM 694

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IR+ KNLR+CVDCH + + ISKI  R+I+VRD  RFH F NG CSCG +W
Sbjct: 695 PIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 238/493 (48%), Gaps = 65/493 (13%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM------ 87
           N L+  Y K G    +RR+FDA P  ++ ++N+L S   H   L++    F  M      
Sbjct: 45  NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104

Query: 88  ----VLSG-----------------------IRPNEFSLSSMINACAGSGDSLLGRKIHG 120
               V++G                       +RP+  ++S+M+ A +  GD  LGR+ H 
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG---CVLHEH 177
             ++LG+  + F  + LV MYAK+G + DA  VF +++  ++V +N +I G   C + E 
Sbjct: 165 QILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEE 224

Query: 178 N-------------DW---------------ALKLFQQMKSSEINPNMFTYTSALKACAG 209
                          W               AL  F++M+   I  + +T+ S L AC  
Sbjct: 225 ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGA 284

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   E G+Q+H  +I+     +  VG  LVDMY+KC S+  A   F  M  KN+I+W  +
Sbjct: 285 LSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTAL 344

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ QNG   EA  +F  M R+G+  D  TL +V+ S A+  ++    Q H L++ +  
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 404

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                + N+L+  YGKCG +EDA ++F E    D V+ T+++T YAQFG  +E + L+ +
Sbjct: 405 MHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEK 464

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           M  +++ PD      +L+AC+     E+G    H      G +        ++++Y++ G
Sbjct: 465 MLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524

Query: 449 SIDDADRAFSEIP 461
            + +A+    ++P
Sbjct: 525 RLKEAEEFIKQMP 537



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 211/435 (48%), Gaps = 40/435 (9%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           A ++  D  LG Q H  ++  GF  + FV + LV MYAK G   D++R+FD +  ++VV 
Sbjct: 149 AASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVM 208

Query: 64  WNSLFSCYVHCDFLEEA-------------------------------VCFFKEMVLSGI 92
           +N++ +  + C  +EEA                               + FF+ M   GI
Sbjct: 209 YNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGI 268

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
             ++++  S++ AC        G++IH Y I+  YD ++F  +ALVDMY+K  +++ A  
Sbjct: 269 AIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAET 328

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
            F+ +   +I+SW A+I G   +  ++ A+++F +M+   I+P+ FT  S + +CA +  
Sbjct: 329 AFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLAS 388

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            E G Q HC  +   +     V   LV +Y KCGS+++A  +F  M   + ++W  +++G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTG 448

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFE 330
           + Q G   E   LF  M  + V  D  T   VL   S A F   G C   H++       
Sbjct: 449 YAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKG-CSYFHSMQKDHGIV 507

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSA-VDLVACTSMITAYAQFG---LGEEALKL 386
             D     +ID Y + G +++A +  K+     D +   ++++A    G   +G+ A + 
Sbjct: 508 PIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAEN 567

Query: 387 YLEMQDREINPDSFV 401
            LE+  +  NP S+V
Sbjct: 568 LLEIDPQ--NPASYV 580



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G Q+H  ++ T +D + FV ++LV MY+KC +   +   F  +  ++
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN 337

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW +L   Y      EEAV  F EM   GI P++F+L S+I++CA       G + H 
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHC 397

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  +NALV +Y K G++EDA  +F ++   D VSW A++ G         
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKE 457

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M + ++ P+  T+   L AC+     E G    CS      K   IV +    
Sbjct: 458 TIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKG----CSYFHSMQKDHGIVPIDDHY 513

Query: 238 --LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
             ++D+Y++ G + EA      MP   + I W  ++S   +  GDME
Sbjct: 514 TCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA-CRLRGDME 559


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/681 (39%), Positives = 421/681 (61%), Gaps = 5/681 (0%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAV 153
               L++ + +C  +GD  LGR +H   +  G  +   F AN L+ MY+   ++  AV +
Sbjct: 16  TSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRL 75

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  +  P++VSW  +++G   +  +  AL  F  M  + + P  F  +SA +A A +  +
Sbjct: 76  FDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAAR 135

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             G QLHC  +++   ++  V   L DMY+K G + EA  +F  MP+K+ +AW  +I G+
Sbjct: 136 HAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGY 195

Query: 274 LQNGGDMEAASL-FPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            +NG ++EAA + F  M REG VG DQ  L +VL +    +   + + +H+  +K+ FE 
Sbjct: 196 AKNG-NLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQ 254

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           +  + N+L D Y K   +++A ++ K +  ++++V+ TS+I  Y +    E+AL +++E+
Sbjct: 255 EVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL 314

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           + + + P+ F  SS++  CA  +  EQG Q+H  +IK   +SD+F  ++L++MY KCG I
Sbjct: 315 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLI 374

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             + + F EI     ++W+A I  LAQHG G+EA++ F +M   G+ PNHIT VS+L AC
Sbjct: 375 SLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTAC 434

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +HAGLV E   +F SM+   GI+P  EHY+C+ID+ GRAG+  EA + +  MP + NA  
Sbjct: 435 SHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYG 494

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W +LLGA R+  N E+G+ AA+ +  +EP+ +  HV LS IYAS G W++V  VR+ M+D
Sbjct: 495 WCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRD 554

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
           N++KK PG SW++   K + F   D SH + ++IY KL+E+ + + + GYVP       +
Sbjct: 555 NRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCN 614

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           +E++ K+++L +HSE++AVAF LI+ P    I VKKNLRIC DCH++ +FISK+ +R+II
Sbjct: 615 LEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDII 674

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           VRD +RFHHF  G CSCG YW
Sbjct: 675 VRDNSRFHHFVKGGCSCGDYW 695



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 247/483 (51%), Gaps = 5/483 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDS-DEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L++C    DL LG  +H  +V +G  +   F+AN L+ MY+ C +   + RLFDA+P  +
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW +L S         +A+  F  M  +G+ P +F+LSS   A A       G ++H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++LG+D+++F A+ L DMY+K G L +A  VF  +   D V+W A+I G   + + + 
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A+  F+ M+    +  +     S L A  G++   L R +H  ++K   + +  V   L 
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263

Query: 240 DMYAKCGSMDEARMIFHL-MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           DMYAK   MD A  +  +     N+++   +I G+++     +A  +F  + R+GV  ++
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNE 323

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T S+++K  A    +    Q+HA  +KT+  SD ++ ++L+D YGKCG +  ++++FKE
Sbjct: 324 FTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                 +A  + I   AQ G G EA++ +  M    I P+     SLL AC++    ++G
Sbjct: 384 IEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEG 443

Query: 419 -KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLA 476
            K  +      G        + +++MY + G +D+A++   E+P +     W +++G   
Sbjct: 444 LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACR 503

Query: 477 QHG 479
             G
Sbjct: 504 MRG 506



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 141/272 (51%), Gaps = 9/272 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A    KD +L   +H  V+ +GF+ +  V N+L  MYAK  +  ++ R+   I + S
Sbjct: 227 VLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVK-IDQGS 285

Query: 61  --VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
             VVS  SL   Y+  D +E+A+  F E+   G+ PNEF+ SSMI  CA       G ++
Sbjct: 286 LNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL 345

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   IK    SD F ++ L+DMY K G +  ++ +FK+IE+   ++WNA I     H H 
Sbjct: 346 HAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHG 405

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK---MEIKSDPIVG 235
             A++ F +M SS I PN  T+ S L AC+   L + G +   S+     +E K +    
Sbjct: 406 REAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSC 465

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEK-NLIAW 266
           +  +DMY + G +DEA      MP K N   W
Sbjct: 466 I--IDMYGRAGRLDEAEKFIGEMPVKPNAYGW 495


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 279/736 (37%), Positives = 418/736 (56%), Gaps = 10/736 (1%)

Query: 43  CGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSM 102
           CG+   +R LFD IP   +  +N+L   Y           +         +PN ++   +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 103 INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI 162
           + AC+   D    R +H ++ + G  +D+F + ALVD+YAK  +   A  VF+ +   D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH-- 220
           V+WNA++AG  LH      +     M+     PN  T  + L   A       GR +H  
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 221 ----CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
               CSL   + K   +VG  L+DMYAKCG +  A  +F  M  +N + W+ ++ G +  
Sbjct: 255 SVRACSL--HDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312

Query: 277 GGDMEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           G  +EA SLF  M  +G+ F   T++++ L++ A+   + + KQ+HAL  K+   +D   
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            NSL+  Y K G ++ A  +F +    D V+ +++++ Y Q G  +EA +++ +MQ   +
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            PD     SL+ AC++L+A + GK  H  +I  G  S+T   N+L++MYAKCG ID + +
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQ 492

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F  +P R IVSW+ MI G   HG GKEA  +F  M      P+ +T + ++ AC+H+GL
Sbjct: 493 IFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGL 552

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V E K  F  M  K+GI P  EHY  M+D+L R G   EA + +  MP +A+  VWGALL
Sbjct: 553 VTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
           GA R++KN+++G+  + M+  + PE +   VLLSNI+++AG +D  A+VR   K+   KK
Sbjct: 613 GACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKK 672

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
            PG SWIE+   ++ F  GDRSHA+S EIY +LD +   +NK GY       L DVEE E
Sbjct: 673 SPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEE 732

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           KE+ L +HSEKLA+AFG++      TI V KNLR+C DCHT  ++++ +  R IIVRD N
Sbjct: 733 KEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDAN 792

Query: 756 RFHHFRNGSCSCGGYW 771
           RFHHF+NG CSCG +W
Sbjct: 793 RFHHFKNGQCSCGDFW 808



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 274/535 (51%), Gaps = 22/535 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC++  DL     VH      G  +D FV+ +LV +YAKC +F  +  +F  +P R 
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN++ + Y +H  + +   C    ++     PN  +L +++   A  G    GR +H
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLL--LMQDDHAPNASTLVALLPLLAQHGALSQGRAVH 252

Query: 120 GYSIKL----GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            YS++      +   +    AL+DMYAK G+L  A  VF+ +   + V+W+A++ G VL 
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312

Query: 176 EHNDWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                A  LF+ M +     ++P   +  SAL+ACA +    LG+QLH  L K  + +D 
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDL 370

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
             G  L+ MYAK G +D+A  +F  M  K+ ++++ ++SG++QNG   EA  +F  M   
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC 430

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  D  T+ +++ + +   A+   K  H   +     S+  I N+LID Y KCG ++ +
Sbjct: 431 NVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLS 490

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACA 410
            +IF    A D+V+  +MI  Y   GLG+EA  L+L+M+ +   PD  +F+C  L++AC+
Sbjct: 491 RQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFIC--LISACS 548

Query: 411 NLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-W 468
           +     +GK+  H+   K+G          +V++ A+ G +D+A +    +P +  V  W
Sbjct: 549 HSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVW 608

Query: 469 SAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            A++G    H     GK+   M  Q+  +G   N + L ++  A       AE +
Sbjct: 609 GALLGACRVHKNIDLGKQVSSMIQQLGPEGT-GNFVLLSNIFSAAGRFDEAAEVR 662


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/767 (34%), Positives = 442/767 (57%), Gaps = 3/767 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C  K+    G +V+  V  +       + N+L+ M+ + GN +D+  +F  + +R+
Sbjct: 112 LIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRN 171

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN L   Y      +EA+  +  M+  G++P+ ++   ++  C G  + + GR+IH 
Sbjct: 172 LFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHV 231

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ G++SD+   NAL+ MY K G++  A  VF  + + D +SWNA+I+G   +     
Sbjct: 232 HVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLE 291

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF  M    ++P++ T TS + AC  +    LGRQ+H  +++ E   DP +   L+ 
Sbjct: 292 GLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIP 351

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+  G ++EA  +F     ++L++W  +ISG+       +A   +  M  EG+  D+ T
Sbjct: 352 MYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEIT 411

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++ VL + +    + +   +H ++ +    S   + NSLID Y KC  ++ A++IF  + 
Sbjct: 412 IAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTL 471

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++V+ TS+I          EAL  + EM  R + P+S     +L+ACA + A   GK+
Sbjct: 472 EKNIVSWTSIILGLRINNRCFEALFFFREMI-RRLKPNSVTLVCVLSACARIGALTCGKE 530

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H H ++ G   D F  N++++MY +CG ++ A + F  + D  + SW+ ++ G A+ G+
Sbjct: 531 IHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGK 589

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G  A ++F +M+E  V PN +T +S+LCAC+ +G+VAE   +F SM+ K+ I P  +HYA
Sbjct: 590 GAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYA 649

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+LGR+GK +EA E +  MP + + +VWGALL + RI+ +VE+G+ AAE +F  +  
Sbjct: 650 CVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTT 709

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               ++LLSN+YA  G WD VA+VR+ M+ N L  +PG SW+EVK  V+ F   D  H +
Sbjct: 710 SVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQ 769

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            KEI A L+     + +AG V   E+   D+ E+ K  +   HSE+LA+ FGLI + PG 
Sbjct: 770 IKEINALLERFYKKMKEAG-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGM 828

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
            I V KNL +C  CH   +FIS+ V REI VRD  +FHHF+ G CSC
Sbjct: 829 PIWVTKNLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSC 875



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 168/564 (29%), Positives = 275/564 (48%), Gaps = 18/564 (3%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDMFSAN 135
           L+ A+ +   M    I   + +  ++I  C        G +++ Y SI + + S     N
Sbjct: 87  LDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQL-GN 145

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           AL+ M+ + GNL DA  VF  +E  ++ SWN ++ G       D AL L+ +M    + P
Sbjct: 146 ALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKP 205

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +++T+   L+ C GM     GR++H  +I+   +SD  V   L+ MY KCG ++ AR++F
Sbjct: 206 DVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVF 265

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MP ++ I+WN +ISG+ +NG  +E   LF  M +  V  D  T+++V+ +        
Sbjct: 266 DKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDR 325

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + +Q+H   ++T F  D  I NSLI  Y   G +E+A  +F  +   DLV+ T+MI+ Y 
Sbjct: 326 LGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYE 385

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
              + ++AL+ Y  M+   I PD    + +L+AC+ L   + G  +H    + G +S + 
Sbjct: 386 NCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSI 445

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             NSL++MYAKC  ID A   F    ++ IVSW+++I GL  + R  EAL  F +M+   
Sbjct: 446 VANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR- 504

Query: 496 VLPNHITLVSVLCACNHAGLVAEAK----HHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           + PN +TLV VL AC   G +   K    H   +     G  P       ++D+  R G+
Sbjct: 505 LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMP-----NAILDMYVRCGR 559

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML-FAIEPEKSSTHVLLSN 610
            + A +   ++  +  +  W  LL     Y     G HA E+    +E   S   V   +
Sbjct: 560 MEYAWKQFFSVDHEVTS--WNILLTG---YAERGKGAHATELFQRMVESNVSPNEVTFIS 614

Query: 611 IYASAGMWDNVAKVRRFMKDNKLK 634
           I  +      VA+   +    K K
Sbjct: 615 ILCACSRSGMVAEGLEYFNSMKYK 638


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/770 (35%), Positives = 439/770 (57%), Gaps = 7/770 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            V+KAC    D+ +GL VHG+VV TG   D FV N+LV  Y   G   D+ +LFD +PER+
Sbjct: 548  VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 607

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSLLGR 116
            +VSWNS+   +    F EE+     EM+         P+  +L +++  CA   +  LG+
Sbjct: 608  LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 667

Query: 117  KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
             +HG+++KL  D ++   NAL+DMY+K G + +A  +FK   + ++VSWN ++ G     
Sbjct: 668  GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 727

Query: 177  HNDWALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                   + +QM +   ++  +  T  +A+  C         ++LHC  +K E   + +V
Sbjct: 728  DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 787

Query: 235  GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
                V  YAKCGS+  A+ +FH +  K + +WN +I GH Q+     +      M   G+
Sbjct: 788  ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 847

Query: 295  GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
              D  T+ ++L + +  +++ + K+VH   ++   E D ++  S++  Y  CG +     
Sbjct: 848  LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 907

Query: 355  IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            +F       LV+  ++IT Y Q G  + AL ++ +M    I         +  AC+ L +
Sbjct: 908  LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 967

Query: 415  YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
               G++ H + +K     D F   SL++MYAK GSI  + + F+ + ++   SW+AMI G
Sbjct: 968  LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 1027

Query: 475  LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
               HG  KEA+++F +M   G  P+ +T + VL ACNH+GL+ E   + + M+  FG++P
Sbjct: 1028 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 1087

Query: 535  MQEHYACMIDILGRAGKFQEAMELV-DTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
              +HYAC+ID+LGRAG+  +A+ +V + M  +A+  +W +LL + RI++N+E+G+  A  
Sbjct: 1088 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 1147

Query: 594  LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
            LF +EPEK   +VLLSN+YA  G W++V KVR+ M +  L+K+ G SWIE+  KV++F V
Sbjct: 1148 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 1207

Query: 654  GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
            G+R     +EI +    +   ++K GY P   +  HD+ E EK + L  HSEKLA+ +GL
Sbjct: 1208 GERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGL 1267

Query: 714  IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNG 763
            I T  G TIRV KNLRICVDCH + + ISK++ REI+VRD  RFHHF+NG
Sbjct: 1268 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 297/592 (50%), Gaps = 28/592 (4%)

Query: 1    VLKACTSKKDLFLGLQVHGIVV-FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
            +L+A   +KD+ +G ++H +V   T   +D+ +   ++ MYA CG+  DSR +FDA+  +
Sbjct: 445  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            ++  WN++ S Y   +  +E +  F EM+  + + P+ F+   +I ACAG  D  +G  +
Sbjct: 505  NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 119  HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
            HG  +K G   D+F  NALV  Y   G + DA+ +F  +   ++VSWN++I     +  +
Sbjct: 565  HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 179  DWALKLFQQMKSSEIN----PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
            + +  L  +M     +    P++ T  + L  CA      LG+ +H   +K+ +  + ++
Sbjct: 625  EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684

Query: 235  GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG- 293
               L+DMY+KCG +  A+MIF +   KN+++WN ++ G    G       +   M   G 
Sbjct: 685  NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744

Query: 294  -VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
             V  D+ T+   +        +   K++H  S+K  F  ++ + N+ + +Y KCG +  A
Sbjct: 745  DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804

Query: 353  VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             ++F    +  + +  ++I  +AQ      +L  +L+M+   + PDSF   SLL+AC+ L
Sbjct: 805  QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864

Query: 413  SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
             +   GK+VH  II+     D F   S++++Y  CG +      F  + D+ +VSW+ +I
Sbjct: 865  KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 924

Query: 473  GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN-----HAGLVAEA---KHHFE 524
             G  Q+G    AL +F QM+  G+    I+++ V  AC+       G  A A   KH  E
Sbjct: 925  TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 984

Query: 525  SMEKKFGIQPMQEHYAC-MIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                           AC +ID+  + G   ++ ++ + +  ++ AS W A++
Sbjct: 985  D----------DAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMI 1025



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 216/424 (50%), Gaps = 12/424 (2%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGY---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           +L  ++ A     D  +GRKIH     S +L  D  +     ++ MYA  G+ +D+  VF
Sbjct: 441 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL--CTRIITMYAMCGSPDDSRFVF 498

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELK 213
             +   ++  WNAVI+    +E  D  L+ F +M  ++++ P+ FTY   +KACAGM   
Sbjct: 499 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 558

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            +G  +H  ++K  +  D  VG  LV  Y   G + +A  +F +MPE+NL++WN +I   
Sbjct: 559 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 618

Query: 274 LQNGGDMEAASLFPWMYRE-GVGF---DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
             NG   E+  L   M  E G G    D  TL TVL   A  + IG+ K VH  +VK   
Sbjct: 619 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 678

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           + +  + N+L+D Y KCG + +A  IFK ++  ++V+  +M+  ++  G       +  +
Sbjct: 679 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 738

Query: 390 M--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           M     ++  D     + +  C + S     K++H + +K  F+ +    N+ V  YAKC
Sbjct: 739 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 798

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           GS+  A R F  I  + + SW+A+IGG AQ    + +L    QM   G+LP+  T+ S+L
Sbjct: 799 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 858

Query: 508 CACN 511
            AC+
Sbjct: 859 SACS 862



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAFESDDYIV 336
           GD E++S    + RE +G        +L++    + I + +++H L S  T   +DD + 
Sbjct: 426 GDDESSSDAFLLVREALGL-------LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 478

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREI 395
             +I  Y  CG  +D+  +F    + +L    ++I++Y++  L +E L+ ++EM    ++
Sbjct: 479 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 538

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            PD F    ++ ACA +S    G  VH  ++K G + D F GN+LV+ Y   G + DA +
Sbjct: 539 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE---DGV-LPNHITLVSVLCAC 510
            F  +P+R +VSW++MI   + +G  +E+  + G+M+E   DG  +P+  TLV+VL  C
Sbjct: 599 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 657


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/758 (35%), Positives = 440/758 (58%), Gaps = 5/758 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD--AIPERSVVSWNSLFSCYVHC 74
           +H  ++     ++ F+A  L+ +Y+  G    +R +FD  ++PE +V   N++ + ++  
Sbjct: 66  IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVC--NAMIAGFLRN 123

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               E    F+ M    I  N ++    + AC    D  +G +I   +++ G+   ++  
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           +++V+   K G L DA  VF  +   D+V WN++I G V       ++++F +M    + 
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+  T  + LKAC    LK++G   H  ++ + + +D  V   LVDMY+  G    A ++
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  M  ++LI+WN +ISG++QNG   E+ +LF  + + G GFD  TL ++++  +    +
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              + +H+  ++   ES   +  +++D Y KCG ++ A  +F      +++  T+M+   
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL 423

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           +Q G  E+ALKL+ +MQ+ ++  +S    SL++ CA+L +  +G+ VH H I+ G+  D 
Sbjct: 424 SQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDA 483

Query: 435 FAGNSLVNMYAKCGSIDDADRAFS-EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
              ++L++MYAKCG I  A++ F+ E   + ++  ++MI G   HG G+ AL ++ +M+E
Sbjct: 484 VITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIE 543

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           + + PN  T VS+L AC+H+GLV E K  F SME+   ++P  +HYAC++D+  RAG+ +
Sbjct: 544 ERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLE 603

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA ELV  MPFQ +  V  ALL   R +KN  +G   A+ L +++   S  +V+LSNIYA
Sbjct: 604 EADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYA 663

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
            A  W++V  +R  M+   +KK PG S IEV +KVYTF   D SH    +IY  L+ +  
Sbjct: 664 EARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRL 723

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            +   GY+P     L DV E  K +LL+ HSE+LA+AFGL++TP G+ I++ KNLR+CVD
Sbjct: 724 EVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVD 783

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CH   ++ISKIV REIIVRD NRFHHF NG CSC  +W
Sbjct: 784 CHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/538 (29%), Positives = 276/538 (51%), Gaps = 11/538 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKACT   D  +G+++    V  GF    +V +S+V    K G   D++++FD +PE+ V
Sbjct: 152 LKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDV 211

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V WNS+   YV      E++  F EM+  G+RP+  ++++++ AC  SG   +G   H Y
Sbjct: 212 VCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSY 271

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            + LG  +D+F   +LVDMY+ +G+   A  VF  +    ++SWNA+I+G V +     +
Sbjct: 272 VLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPES 331

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             LF+++  S    +  T  S ++ C+     E GR LH  +I+ E++S  ++   +VDM
Sbjct: 332 YALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDM 391

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KCG++ +A ++F  M +KN+I W  ++ G  QNG   +A  LF  M  E V  +  TL
Sbjct: 392 YSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTL 451

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESS 360
            +++   A   ++   + VHA  ++  +  D  I ++LID Y KCG +  A K+F  E  
Sbjct: 452 VSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFH 511

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D++ C SMI  Y   G G  AL +Y  M +  + P+     SLL AC++    E+GK 
Sbjct: 512 LKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKA 571

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           + H                 LV+++++ G +++AD    ++P +       A++ G   H
Sbjct: 572 LFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTH 631

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
                 +Q+  +++    L + I ++        + + AEA+  +ES+    G+  MQ
Sbjct: 632 KNTNMGIQIADRLISLDYLNSGIYVML-------SNIYAEAR-KWESVNYIRGLMRMQ 681



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 257/517 (49%), Gaps = 31/517 (5%)

Query: 48  DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           + R +++A P  + VS +       H  F  +A   F  ++      ++FS +++I+   
Sbjct: 20  NCRPIYNAAPSSTFVSVH-------HAPFFNQAPSVFSSLL------HQFS-NTLIHV-- 63

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
                   + IH   IK    ++ F A  L+ +Y+ +G L  A  VF     P+    NA
Sbjct: 64  --------KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNA 115

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +IAG + ++ +    +LF+ M S +I  N +T   ALKAC  +   E+G ++  + ++  
Sbjct: 116 MIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRG 175

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                 VG  +V+   K G + +A+ +F  MPEK+++ WN +I G++Q G   E+  +F 
Sbjct: 176 FHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFL 235

Query: 288 WMYREGVGFDQTTLSTVLKSV--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
            M   G+     T++ +LK+   +  + +G+C   + L++     +D +++ SL+D Y  
Sbjct: 236 EMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLAL--GMGNDVFVLTSLVDMYSN 293

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
            G    A  +F    +  L++  +MI+ Y Q G+  E+  L+  +       DS    SL
Sbjct: 294 LGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSL 353

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +  C+  S  E G+ +H  II+    S      ++V+MY+KCG+I  A   F  +  + +
Sbjct: 354 IRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNV 413

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFE 524
           ++W+AM+ GL+Q+G  ++AL++F QM E+ V  N +TLVS++  C H G + + +  H  
Sbjct: 414 ITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAH 473

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
            +   +    +    + +ID+  + GK   A +L + 
Sbjct: 474 FIRHGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNN 508



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 185/363 (50%), Gaps = 8/363 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC       +G+  H  V+  G  +D FV  SLV MY+  G+   +  +FD++  RS
Sbjct: 252 LLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRS 311

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++ S YV    + E+   F+ +V SG   +  +L S+I  C+ + D   GR +H 
Sbjct: 312 LISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHS 371

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I+   +S +  + A+VDMY+K G ++ A  VF  +   ++++W A++ G   + + + 
Sbjct: 372 CIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAED 431

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF QM+  ++  N  T  S +  CA +     GR +H   I+     D ++   L+D
Sbjct: 432 ALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALID 491

Query: 241 MYAKCGSMDEARMI----FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           MYAKCG +  A  +    FHL   K++I  N +I G+  +G    A  ++  M  E +  
Sbjct: 492 MYAKCGKIHSAEKLFNNEFHL---KDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKP 548

Query: 297 DQTTLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           +QTT  ++L + +    +   K + H++               L+D + + G +E+A ++
Sbjct: 549 NQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADEL 608

Query: 356 FKE 358
            K+
Sbjct: 609 VKQ 611


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 292/814 (35%), Positives = 440/814 (54%), Gaps = 100/814 (12%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC-YVHCDFLEEAVCFFKEM 87
           D  V  SL  +   C N +          ++SV   N  F+   VHC            +
Sbjct: 2   DAPVPLSLSTLLELCTNLL----------QKSVNKSNGRFTAQLVHC-----------RV 40

Query: 88  VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS----DMFSANALVDMYAK 143
           + SG+  + + +++++N  + +G +L  RK+        +D       FS N ++  Y+K
Sbjct: 41  IKSGLMFSVYLMNNLMNVYSKTGYALHARKL--------FDEMPLRTAFSWNTVLSAYSK 92

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G+++     F  +   D VSW  +I G         A+++   M    I P  FT T+ 
Sbjct: 93  RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG----------------- 246
           L + A     E G+++H  ++K+ ++ +  V   L++MYAKCG                 
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212

Query: 247 --------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                          MD A   F  M E++++ WN +ISG  Q G D+ A  +F  M R+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272

Query: 293 GV-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            +   D+ TL++VL + A+ + + + KQ+H+  V T F+    ++N+LI  Y +CG VE 
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332

Query: 352 AVKIFKESSAVDL---------------------------------VACTSMITAYAQFG 378
           A ++ ++    DL                                 VA T+MI  Y Q G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              EA+ L+  M      P+S+  +++L+  ++L++   GKQ+H   +K G +      N
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452

Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           +L+ MYAK G+I  A RAF  I  +R  VSW++MI  LAQHG  +EAL++F  ML +G+ 
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+HIT V V  AC HAGLV + + +F+ M+    I P   HYACM+D+ GRAG  QEA E
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            ++ MP + +   WG+LL A R++KN+++G+ AAE L  +EPE S  +  L+N+Y++ G 
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 632

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W+  AK+R+ MKD ++KKE G SWIEVK KV+ F V D +H    EIY  + ++ D + K
Sbjct: 633 WEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKK 692

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            GYVP   + LHD+EE  KEQ+L HHSEKLA+AFGLI+TP   T+R+ KNLR+C DCHT+
Sbjct: 693 MGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTA 752

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +FISK+V REIIVRD  RFHHF++G CSC  YW
Sbjct: 753 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 258/575 (44%), Gaps = 99/575 (17%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           K+       F    VH  V+ +G     ++ N+L+ +Y+K G  + +R+LFD +P R+  
Sbjct: 22  KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81

Query: 63  SWNSLFSCYVH-------CDFLEE------------------------AVCFFKEMVLSG 91
           SWN++ S Y         C+F ++                        A+    +MV  G
Sbjct: 82  SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           I P +F+L++++ + A +     G+K+H + +KLG   ++  +N+L++MYAK G+   A 
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM----------------------- 188
            VF  +   DI SWNA+IA  +     D A+  F+QM                       
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261

Query: 189 ---------KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
                    + S ++P+ FT  S L ACA +E   +G+Q+H  ++        IV   L+
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321

Query: 240 DMYAKCGS---------------------------------MDEARMIFHLMPEKNLIAW 266
            MY++CG                                  M++A+ IF  + +++++AW
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I G+ Q+G   EA +LF  M   G   +  TL+ +L   +S  ++   KQ+H  +VK
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALK 385
           +       + N+LI  Y K G++  A + F       D V+ TSMI A AQ G  EEAL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMY 444
           L+  M    + PD      + +AC +     QG+Q    +     +  T +  + +V+++
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            + G + +A     ++P +  +V+W +++     H
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 145/613 (23%), Positives = 255/613 (41%), Gaps = 121/613 (19%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +  + + +  G +VH  +V  G   +  V+NSL+ MYAKCG+ + ++ +FD +  R 
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSG------------------- 91
           + SWN++ + ++    ++ A+  F++M          ++SG                   
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271

Query: 92  ---IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA------ 142
              + P+ F+L+S+++ACA      +G++IH + +  G+D      NAL+ MY+      
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331

Query: 143 ---------------------------KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                                      K+G++  A  +F  ++  D+V+W A+I G   H
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A+ LF+ M      PN +T  + L   + +     G+Q+H S +K        V 
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L+ MYAK G++  A   F L+  E++ ++W  +I    Q+G   EA  LF  M  EG+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T       V  F A       HA  V    +  D +              +D  K
Sbjct: 512 RPDHITY------VGVFSAC-----THAGLVNQGRQYFDMM--------------KDVDK 546

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           I    S     AC  M+  + + GL +EA +   +M    I PD     SLL+AC     
Sbjct: 547 IIPTLSH---YAC--MVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKN 598

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWS 469
            + GK     ++      ++ A ++L N+Y+ CG  ++A +    + D  +      SW 
Sbjct: 599 IDLGKVAAERLLLLE-PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPN----HITLVSVLCACNHAGLVAEAKHHFES 525
            +          K  + +FG  +EDG  P     ++T+  +       G V +       
Sbjct: 658 EV----------KHKVHVFG--VEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 705

Query: 526 MEKKFGIQPMQEH 538
           +E++   Q ++ H
Sbjct: 706 LEEEVKEQILRHH 718


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/737 (38%), Positives = 428/737 (58%), Gaps = 10/737 (1%)

Query: 42  KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSS 101
           KCG+   + +LFD + + ++V++NSL S YV    L++ +  F +    G++ ++++ + 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
            + AC+ SG+   G+ IHG  +  G  S +   N+L+DMY+K G ++ A  +F   +  D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM--ELKELGRQL 219
            VSWN++IAG V +   +  L + Q+M  + +  N +T  SALKAC+      K  G  L
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ---- 275
           H   IK+ +  D +VG  L+DMYAK GS+D+A  IF  M +KN++ +N +++G LQ    
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252

Query: 276 -NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
            +    +A +LF  M   G+     T S++LK+    +     KQVHAL  K    SD+Y
Sbjct: 253 EDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEY 312

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           I + LID Y   G + DA+  F     + +V  T+MI  Y Q G  E AL L+ E+   E
Sbjct: 313 IGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYE 372

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
             PD F+ S+++++CAN+     G+Q+  H  K G    T   NS + MYAK G +  A+
Sbjct: 373 EKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAAN 432

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
             F ++ +  IVSWS MI   AQHG   EAL+ F  M   G+ PNH   + VL AC+H G
Sbjct: 433 LTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRG 492

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           LV E   +F++MEK + ++   +H  C++D+LGRAG+  +A  L+  + F+    +W AL
Sbjct: 493 LVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRAL 552

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           L A RI+K+    Q  A+ +  +EP  S+++VLL NIY  AG     +KVR  M++ ++K
Sbjct: 553 LSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIK 612

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           KEPG+SWI++ DKVY+F  GDRSH  S +IYAKLDE   +L     +   +  L    E 
Sbjct: 613 KEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDE---MLATTKRLDSAKDILGYKIEH 669

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           E    + +HSEKLAVAFG++     A +RV KNLRIC+DCH + +  S +  RE+IVRD 
Sbjct: 670 EHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDS 729

Query: 755 NRFHHFRNGSCSCGGYW 771
            RFHHF++GSCSCG YW
Sbjct: 730 VRFHHFKDGSCSCGDYW 746



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 227/424 (53%), Gaps = 7/424 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+   +L  G  +HG+++  G  S   + NSL+ MY+KCG    +R LFD   +   
Sbjct: 74  LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDG 133

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG--SGDSLLGRKIH 119
           VSWNSL + YV     EE +   ++M  +G+  N ++L S + AC+   +G  + G  +H
Sbjct: 134 VSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 193

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            ++IKLG   D+    AL+DMYAK G+L+DA+ +F  +   ++V +NA++AG +  E  +
Sbjct: 194 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 253

Query: 180 -----WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 AL LF +MKS  I P+MFTY+S LKAC  +E  +  +Q+H  + K  + SD  +
Sbjct: 254 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 313

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  L+D+Y+  GSM +A + F+ +    ++    +I G+LQNG    A SLF  +     
Sbjct: 314 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEE 373

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+   ST++ S A+   +   +Q+   + K          NS I  Y K G +  A  
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 433

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            F++    D+V+ ++MI + AQ G   EAL+ +  M+   I P+ F    +L AC++   
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493

Query: 415 YEQG 418
            E+G
Sbjct: 494 VEEG 497



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 6/276 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   +D     QVH ++   G  SDE++ + L+ +Y+  G+ +D+   F++I   +
Sbjct: 282 LLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLT 341

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V   ++   Y+     E A+  F E++    +P+EF  S+++++CA  G    G +I G
Sbjct: 342 IVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQG 401

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++ K+G        N+ + MYAK G+L  A   F+ +E+PDIVSW+ +I     H H   
Sbjct: 402 HATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAME 461

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL---IKMEIKSDPIVGVG 237
           AL+ F+ MKS  I PN F +   L AC+   L E G +   ++    KM++     V V 
Sbjct: 462 ALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCV- 520

Query: 238 LVDMYAKCGSMDEAR-MIFHLMPEKNLIAWNIVISG 272
            VD+  + G + +A  +I  L  E   + W  ++S 
Sbjct: 521 -VDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 555


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 274/732 (37%), Positives = 425/732 (58%), Gaps = 28/732 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +CT  +    G  VH      GF S+ FV N+L+ +Y +CG+F  + R+F  +P R 
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V++N+L S +  C   E A+  F+EM  SG+ P+  ++SS++ ACA  GD   G ++H 
Sbjct: 209 TVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K G  SD     +L+D+Y K G++E A+ +F      ++V WN ++      + ND 
Sbjct: 269 YLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVA--FGQINDL 326

Query: 181 A--LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           A   +LF QM+++ I PN FTY   L+ C      +LG Q+H   +K   +SD  V   L
Sbjct: 327 AKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVL 386

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY+K G +++AR +  ++ EK++++W  +I+G++Q+    +A + F  M + G+  D 
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDN 446

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             L++ +   A  +A+    Q+HA    + +  D  I N+L++ Y +CG + +A   F+E
Sbjct: 447 IGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEE 506

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D +    +++ +AQ GL EEALK+++ M    +  + F   S L+A ANL+  +QG
Sbjct: 507 IEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H  +IK G   +T  GN+L+++Y KCGS +DA   FSE+ +R  VSW+ +I   +QH
Sbjct: 567 KQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQH 626

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG EAL  F QM ++G+                         +F+SM  K+GI+P  +H
Sbjct: 627 GRGLEALDFFDQMKKEGL------------------------SYFKSMSDKYGIRPRPDH 662

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC+IDI GRAG+   A + V+ MP  A+A VW  LL A +++KN+EVG+ AA+ L  +E
Sbjct: 663 YACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELE 722

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+++VLLSN YA  G W N  +VR+ M+D  ++KEPG SWIEVK+ V+ F VGDR H
Sbjct: 723 PHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLH 782

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             +++IY  L  ++D + K GY        HD E+  ++     HSEKLAV FGL++ PP
Sbjct: 783 PLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPP 842

Query: 719 GATIRVKKNLRI 730
              +RV KNLR+
Sbjct: 843 CMPLRVIKNLRV 854



 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 184/560 (32%), Positives = 303/560 (54%), Gaps = 2/560 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H   +  G   D  V N L+ +Y+K G  + +RR+F+ +  R  VSW ++ S Y    
Sbjct: 63  EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EEA+  +++M  +G+ P  + LSS++++C  +     GR +H    K G+ S+ F  N
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           AL+ +Y + G+   A  VF D+ H D V++N +I+G     H + AL++F++M+SS ++P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T +S L ACA +   + G QLH  L K  + SD I+   L+D+Y KCG ++ A +IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           +L    N++ WN+++    Q     ++  LF  M   G+  +Q T   +L++      I 
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + +Q+H+LSVKT FESD Y+   LID Y K G +E A ++ +     D+V+ TSMI  Y 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q    ++AL  + EMQ   I PD+   +S ++ CA + A  QG Q+H  +   G+  D  
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVS 482

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             N+LVN+YA+CG I +A  +F EI  +  ++W+ ++ G AQ G  +EAL++F +M + G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V  N  T VS L A  +   + + K    +   K G     E    +I + G+ G F++A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGK-QIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601

Query: 556 MELVDTMPFQANASVWGALL 575
                 M  + N   W  ++
Sbjct: 602 KMEFSEMS-ERNEVSWNTII 620



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 165/315 (52%), Gaps = 5/315 (1%)

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV-ASFQAIGVCKQVHA 322
           + W++  +G L      +  SLF    R+  G      +  L++   + +   V  ++HA
Sbjct: 9   LGWSL--AGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHA 66

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
            ++      D  + N LID Y K G V  A ++F+E SA D V+  +M++ YAQ GLGEE
Sbjct: 67  KAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEE 126

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL LY +M    + P  +V SS+L++C     + QG+ VH    K GF S+TF GN+L+ 
Sbjct: 127 ALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALIT 186

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           +Y +CGS   A+R F ++P R  V+++ +I G AQ   G+ AL++F +M   G+ P+ +T
Sbjct: 187 LYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVT 246

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
           + S+L AC   G + +      S   K G+         ++D+  + G  + A+ ++  +
Sbjct: 247 ISSLLAACASLGDLQKGT-QLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL-VIFNL 304

Query: 563 PFQANASVWGALLGA 577
             + N  +W  +L A
Sbjct: 305 GNRTNVVLWNLILVA 319


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/777 (36%), Positives = 436/777 (56%), Gaps = 61/777 (7%)

Query: 1   VLKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+AC+  K  F +  Q+H  ++  GF S   V N L+ +Y+K G+   ++ +F+ +  +
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK 176

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSW ++ S        +EA+  F +M  S + P  +  SS+++AC       LG ++H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G+ +K G  S+ F  NALV +Y++ GNL  A  +F  +   D +S+N++I+G      +D
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+LF++M+   + P+  T  S L ACA +     G+QLH  +IKM + SD I+   L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KC  ++ A   F     +N++ WN+++  + Q G   E+  +F  M  EG+  +Q 
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L++  S  A+ + +Q+H   +K+ F+ + Y+ + LID Y K G ++ A  I +  
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ T+MI  Y Q  L  EALKL+ EM+++ I  D+   SS ++ACA + A  QG+
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536

Query: 420 QVHVHIIKFGFMSD-----TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
           Q+H      G+  D       A N L+ +Y+KCGSI+DA R F E+P++ +VSW+AMI G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITG 596

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            +QHG G EA+ +F +M + G++PN            H   V E                
Sbjct: 597 YSQHGYGSEAVSLFEEMKQLGLMPN------------HVTFVGE---------------- 628

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
                                      MP + +A +W  LL A  ++KN+E+G+ AA  L
Sbjct: 629 ---------------------------MPIEPDAMIWRTLLSACTVHKNIEIGEFAARHL 661

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             +EPE S+T+VLLSN+YA +G WD   + R+ MKD  +KKEPG SWIEVK+ ++ F VG
Sbjct: 662 LELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVG 721

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           DR H  +++IY  +D++++   + GYV      L+DVE+ +K+   Y HSEKLAVAFGL+
Sbjct: 722 DRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLL 781

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +      IRV KNLR+C DCH   +F+SKI +R I+VRD  RFHHF  G CSC  YW
Sbjct: 782 SLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 252/491 (51%), Gaps = 9/491 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           GIR N  +   +   C  SG  L  +K+H    K G+D +    + L+D+Y   G +++A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           + +F DI   ++  WN VI+G +  +     L LF  M +  + P+  T+ S L+AC+G 
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 211 ELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   ++  Q+H  +I     S P+V   L+D+Y+K G +D A+++F  +  K+ ++W  +
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG  QNG + EA  LF  M++  V       S+VL +    +   + +Q+H   VK   
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            S+ ++ N+L+  Y + G++  A +IF +    D ++  S+I+  AQ G  + AL+L+ +
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           MQ   + PD    +SLL+ACA++ A  +GKQ+H ++IK G  SD     SL+++Y KC  
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+ A   F       +V W+ M+    Q G   E+  +F QM  +G++PN  T  S+L  
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 510 CNHAGLVAEAKH-HFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQA 566
           C   G +   +  H + ++  F        Y C  +ID+  + G+   A  ++  +  + 
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARGILQRLR-EE 479

Query: 567 NASVWGALLGA 577
           +   W A++  
Sbjct: 480 DVVSWTAMIAG 490



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 9/190 (4%)

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M++R I  +      L   C N  +    K++H  I K GF  +   G+ L+++Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +D+A + F +IP   +  W+ +I GL       + L +F  M+ + V P+  T  SVL A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 510 CN--HAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQ 565
           C+   A      + H + +   FG  P+     C  +ID+  + G    A +LV    F 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPL----VCNPLIDLYSKNGHVDLA-KLVFERLFL 175

Query: 566 ANASVWGALL 575
            ++  W A++
Sbjct: 176 KDSVSWVAMI 185


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 259/659 (39%), Positives = 403/659 (61%), Gaps = 2/659 (0%)

Query: 115 GRKIHGYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           G+++H + I     +++ +    L   YA  G +  A  +F  I   +   WN +I G  
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
            +     +L L+++M       + FTY   LKAC  + L E+GR++H  ++   ++SD  
Sbjct: 138 SNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIY 197

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  L+ MYAK G M  ARM+F  M E++L +WN +ISG+ +N     A  +F  M + G
Sbjct: 198 VGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAG 257

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES-DDYIVNSLIDAYGKCGHVEDA 352
           +  D TTL  +L + A  +A+   K +H  +V+ +  + + +  NSLI+ Y  C  + DA
Sbjct: 258 LFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDA 317

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            ++F+     D V+  SMI  YA+ G   E+L+L+  M      PD     ++L AC  +
Sbjct: 318 RRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQI 377

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +A   G  +H +++K GF ++T  G +LV+MY+KCGS+  + R F E+PD+ +VSWSAM+
Sbjct: 378 AALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMV 437

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G   HGRG+EA+ +   M  + V+P++    S+L AC+HAGLV E K  F  MEK++ +
Sbjct: 438 AGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNV 497

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P   HY+CM+D+LGRAG   EA  ++ TM  +  + +W ALL A+R++KN+++ + +A+
Sbjct: 498 KPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQ 557

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            +F + P+  S+++ LSNIYA+   WD+V +VR  ++   LKK PG S+IE+ + V+ F 
Sbjct: 558 KVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFL 617

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
           VGD+SH ++++IYAKL+E+   L +AGY P      +DVEE  KE++L+ HSE+LA+AF 
Sbjct: 618 VGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFA 677

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI T PG  IR+ KNLR+C DCHT  + IS++  REII+RD++RFHHF  G CSCG YW
Sbjct: 678 LINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 244/487 (50%), Gaps = 14/487 (2%)

Query: 1   VLKACTSKKDLFLGLQVHG-IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L++ T+ K    G Q+H  ++ F+  +++ ++   L   YA CG    +  +FD I  +
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL---GR 116
           +   WN +   Y       +++  ++EM+  G R + F+   ++ AC   GD LL   GR
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKAC---GDLLLVEIGR 181

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H   +  G +SD++  N+L+ MYAK G++  A  VF  +   D+ SWN +I+G   + 
Sbjct: 182 RVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNA 241

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS-DPIVG 235
            +  A  +F  M  + +  +  T    L ACA ++  + G+ +H   ++  I + +    
Sbjct: 242 DSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFT 301

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L++MY  C  M +AR +F  +  K+ ++WN +I G+ +NG   E+  LF  M  +G G
Sbjct: 302 NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSG 361

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            DQ T   VL +     A+     +H+  VK  F+++  +  +L+D Y KCG +  + ++
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRV 421

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F E     LV+ ++M+  Y   G G EA+ +   M+   + PD+ V +S+L+AC++    
Sbjct: 422 FDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLV 481

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDAD---RAFSEIPDRGIVSWSAM 471
            +GK++   + K   +    +  S +V++  + G +D+A    R     P   I  W+A+
Sbjct: 482 VEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDI--WAAL 539

Query: 472 IGGLAQH 478
           +     H
Sbjct: 540 LTASRLH 546



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNMYAKCGSIDDADRAF 457
           S  C +LL +  N  +++QG+Q+H H+I F  + ++T+    L   YA CG +  A+  F
Sbjct: 59  SLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIF 118

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
             I  +    W+ MI G A +G   ++L ++ +ML  G   ++ T   VL AC    LV
Sbjct: 119 DGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLV 177


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/775 (36%), Positives = 435/775 (56%), Gaps = 10/775 (1%)

Query: 1   VLKACTSKKDLFLGL-QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
            L A  SK   F  L + H  ++  G+  D      L       G    +R LF ++P+ 
Sbjct: 10  TLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKP 69

Query: 60  SVVSWNSLFSCYVHCDFLEEA--VCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGR 116
            +  +N L   +    F  +A  + F+  ++  + + P+ F+ +  I+A   S D  LG 
Sbjct: 70  DIFLFNVLIKGF---SFSPDASSISFYTHLLKNTTLSPDNFTYAFAISA---SPDDNLGM 123

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +H +++  G+DS++F A+ALVD+Y K   +  A  VF  +   D V WN +I G V + 
Sbjct: 124 CLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNC 183

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             D ++++F+ M +  +  +  T  + L A A M+  ++G  + C  +K+    D  V  
Sbjct: 184 CYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLT 243

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           GL+ +++KC  +D AR++F ++ + +L+++N +ISG   NG    A   F  +   G   
Sbjct: 244 GLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRV 303

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             +T+  ++   + F  + +   +    VK+       +  +L   Y +   ++ A ++F
Sbjct: 304 SSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLF 363

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            ESS   + A  +MI+ YAQ GL E A+ L+ EM   E  P+    +S+L+ACA L A  
Sbjct: 364 DESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALS 423

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            GK VH  I       + +   +L++MYAKCG+I +A + F    ++  V+W+ MI G  
Sbjct: 424 FGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYG 483

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG G EAL++F +ML  G  P+ +T +SVL AC+HAGLV E    F +M  K+ I+P+ 
Sbjct: 484 LHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLA 543

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYACM+DILGRAG+ ++A+E +  MP +   +VWG LLGA  I+K+  + + A+E LF 
Sbjct: 544 EHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFE 603

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P     +VLLSNIY+    +   A VR  +K   L K PG + IEV    + F  GDR
Sbjct: 604 LDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDR 663

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH+++  IYAKL+E++  + + GY     T LHDVEE EKE +   HSEKLA+AFGLI T
Sbjct: 664 SHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITT 723

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            PG  IR+ KNLR+C+DCH + +FISKI  R I+VRD NRFHHF++G CSCG YW
Sbjct: 724 EPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/752 (37%), Positives = 435/752 (57%), Gaps = 21/752 (2%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+ N+L+  Y + G  + +RRL D +P R+ VS+N L   Y        ++        +
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+  + FS ++ + AC+ +G    GR +H  +I  G  S +F +N+LV MY+K G + +A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF   E  D VSWN++++G V     +  +++F  M+   +  N F   S +K C+G 
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 211 E--LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
                ++   +H  +IK  + SD  +   ++DMYAK G++ EA  +F  + E N++ +N 
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 269 VISGHLQN----GGDM--EAASLFPWMYREGVGFDQTTLSTVLKS--VASFQAIGVCKQV 320
           +I+G  +     G ++  EA +L+  +   G+   + T S+VL++  +A +   G  KQ+
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG--KQI 341

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           H   +K  F+ DD+I ++LID Y   G +ED  + F+ S   D+V  T+M++   Q  L 
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E+AL L+ E     + PD F  SS++NACA+L+    G+Q+     K GF   T  GNS 
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSC 461

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MYA+ G +D A R F E+    +VSWSA+I   AQHG  ++AL  F +M++  V+PN 
Sbjct: 462 VHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNE 521

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           IT + VL AC+H GLV E   ++E+M K +G+ P  +H  C++D+LGRAG+  +A   + 
Sbjct: 522 ITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFIS 581

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
              F A+  +W +LL + RI++++E GQ  A  +  +EP  S+++V+L N+Y  AG    
Sbjct: 582 NSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSL 641

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
            +K R  MK   +KKEPG+SWIE+K  V++F  GD+SH  S  IY KL+E+   + K   
Sbjct: 642 ASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLAT 701

Query: 681 VPMVETDLHDVEESEKEQ-LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
                    D E S++EQ L+  HSEKLAVA G+I  P  A IRV KNLR+C DCH++ +
Sbjct: 702 T--------DTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMK 753

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISK  +REII+RD  RFHHFR+GSCSC  YW
Sbjct: 754 LISKSENREIILRDPIRFHHFRDGSCSCADYW 785


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/790 (35%), Positives = 430/790 (54%), Gaps = 50/790 (6%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           + + L+  Y   G    +  L    P  +  V  WNSL   Y +     + +  F  M  
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
               P+ ++   +  AC        G   H  S   G+ S++F  NALV MY++ G+L D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACA 208
           A  VF ++   D+VSWN++I           AL++F +M +     P+  T  + L  CA
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +  + LG+Q H   +  E+  +  VG  LVDMYAK G MDEA  +F  MP K++++WN 
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVCKQ----- 319
           +++G+ Q G   +A  LF  M  E +  D  T S  +   A     ++A+GVC+Q     
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360

Query: 320 --------------------------VHALSVKTAFE-------SDDYIVNSLIDAYGKC 346
                                     +H  ++K   +        ++ ++N LID Y KC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420

Query: 347 GHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVC 402
             V+ A  +F   S    D+V  T MI  Y+Q G   +AL+L  EM  +D +  P++F  
Sbjct: 421 KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           S  L ACA+L+A   GKQ+H + ++    +   F  N L++MYAKCG I DA   F  + 
Sbjct: 481 SCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMM 540

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           ++  V+W++++ G   HG G+EAL +F +M   G   + +TL+ VL AC+H+G++ +   
Sbjct: 541 EKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           +F  M+  FG+ P  EHYAC++D+LGRAG+   A+ L++ MP +    VW ALL   RI+
Sbjct: 601 YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIH 660

Query: 582 KNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
             VE+G++AA+ +  +      ++ LLSN+YA+AG W +V ++R  M+   +KK PG SW
Sbjct: 661 GKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSW 720

Query: 642 IEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY 701
           +E      TF VGD++H  +KEIY  L +    +   GYVP     LHDV++ EK+ LL+
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLF 780

Query: 702 HHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFR 761
            HSEKLA+A+G++ TP GA IR+ KNLR+C DCHT+F ++S+I+  EII+RD +RFHHF+
Sbjct: 781 EHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFK 840

Query: 762 NGSCSCGGYW 771
           NG CSC GYW
Sbjct: 841 NGLCSCKGYW 850



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 166/530 (31%), Positives = 264/530 (49%), Gaps = 50/530 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC     +  G   H +   TGF S+ FV N+LV MY++CG+  D+R++FD +P   
Sbjct: 133 VFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWD 192

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSWNS+   Y      + A+  F +M    G RP++ +L +++  CA  G   LG++ H
Sbjct: 193 VVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFH 252

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G+++      +MF  N LVDMYAK G +++A  VF ++   D+VSWNA++AG       +
Sbjct: 253 GFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFE 312

Query: 180 WALKLFQQMK-----------------------------------SSEINPNMFTYTSAL 204
            A++LF+QM+                                   SS I PN  T  S L
Sbjct: 313 DAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372

Query: 205 KACAGMELKELGRQLHCSLIK--MEIKS-----DPIVGVGLVDMYAKCGSMDEARMIF-H 256
             CA +     G+++HC  IK  M+++      + +V   L+DMYAKC  +D AR +F  
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDS 432

Query: 257 LMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQA 313
           L P E++++ W ++I G+ Q+G   +A  L   M+ E      +  T+S  L + AS  A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492

Query: 314 IGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           + + KQ+HA +++    +   ++ N LID Y KCG + DA  +F      + V  TS++T
Sbjct: 493 LSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMT 552

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFM 431
            Y   G GEEAL ++ EM+      D      +L AC++    +QG +    +   FG  
Sbjct: 553 GYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVS 612

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR 480
                   LV++  + G ++ A R   E+P +   V W A++     HG+
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGK 662


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/752 (37%), Positives = 435/752 (57%), Gaps = 21/752 (2%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+ N+L+  Y + G  + +RRL D +P R+ VS+N L   Y        ++        +
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+  + FS ++ + AC+ +G    GR +H  +I  G  S +F +N+LV MY+K G + +A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF   E  D VSWN++++G V     +  +++F  M+   +  N F   S +K C+G 
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 211 E--LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
                ++   +H  +IK  + SD  +   ++DMYAK G++ EA  +F  + E N++ +N 
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 269 VISGHLQN----GGDM--EAASLFPWMYREGVGFDQTTLSTVLKS--VASFQAIGVCKQV 320
           +I+G  +     G ++  EA +L+  +   G+   + T S+VL++  +A +   G  KQ+
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG--KQI 341

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           H   +K  F+ DD+I ++LID Y   G +ED  + F+ S   D+V  T+M++   Q  L 
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E+AL L+ E     + PD F  SS++NACA+L+    G+Q+     K GF   T  GNS 
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSC 461

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MYA+ G +D A R F E+    +VSWSA+I   AQHG  ++AL  F +M++  V+PN 
Sbjct: 462 VHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNE 521

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           IT + VL AC+H GLV E   ++E+M K +G+ P  +H  C++D+LGRAG+  +A   + 
Sbjct: 522 ITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFIS 581

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
              F A+  +W +LL + RI++++E GQ  A  +  +EP  S+++V+L N+Y  AG    
Sbjct: 582 NGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSL 641

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
            +K R  MK   +KKEPG+SWIE+K  V++F  GD+SH  S  IY KL+E+   + K   
Sbjct: 642 ASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLAT 701

Query: 681 VPMVETDLHDVEESEKEQ-LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
                    D E S++EQ L+  HSEKLAVA G+I  P  A IRV KNLR+C DCH++ +
Sbjct: 702 T--------DTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMK 753

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISK  +REII+RD  RFHHFR+GSCSC  YW
Sbjct: 754 LISKSENREIILRDPIRFHHFRDGSCSCADYW 785


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 276/743 (37%), Positives = 431/743 (58%), Gaps = 8/743 (1%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+ N +V  Y KCG+   +R  FDAI  ++  SW S+ + Y        A+  +K M L 
Sbjct: 59  FLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDL- 117

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDMFSANALVDMYAKVGNLED 149
             +PN    ++++ ACA       G+ IH   S   G   D+   N+L+ MYAK G+LED
Sbjct: 118 --QPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ +    + SWNA+IA      H + A++L++ M   ++ P++ T+TS L AC+ 
Sbjct: 176 AKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSN 232

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           + L + GR++H  +     + D  +   L+ MYA+C  +D+A  IF  +P +++++W+ +
Sbjct: 233 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 292

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+   +     EA   +  M  EGV  +  T ++VL + AS   +   + VH   +   +
Sbjct: 293 IAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 352

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           +       +L+D Y   G +++A  +F +    D    T +I  Y++ G     L+LY E
Sbjct: 353 KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYRE 412

Query: 390 MQDREINPDS-FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           M++    P +  + S +++ACA+L A+   +Q H  I   G +SD     SLVNMY++ G
Sbjct: 413 MKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWG 472

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           +++ A + F ++  R  ++W+ +I G A+HG    AL ++ +M  +G  P+ +T + VL 
Sbjct: 473 NLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLY 532

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+HAGL  + K  F S++  + + P   HY+C+ID+L RAG+  +A EL++ MP + N 
Sbjct: 533 ACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPND 592

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
             W +LLGA+RI+K+V+   HAA  +  ++P   +++VLLSN++A  G    +A VR  M
Sbjct: 593 VTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTM 652

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
               +KK  G SWIEV D+++ F VGD SH R +EI+A+L  +S  + +AGYVP  E  L
Sbjct: 653 VARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVL 712

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           HDV E EKE LL  HSEKLA+AFGLIAT PG T+R+   LRIC DCH++ +FIS I  RE
Sbjct: 713 HDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARRE 772

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD +RFH FR+G CSCG YW
Sbjct: 773 IIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 270/524 (51%), Gaps = 10/524 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFT-GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC S K L  G  +H  +  T G   D  + NSL+ MYAKCG+  D++RLF+ +  R
Sbjct: 127 VLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR 186

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           SV SWN++ + Y      EEA+  +++M    + P+  + +S+++AC+  G    GRKIH
Sbjct: 187 SVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIH 243

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                 G + D+   NAL+ MYA+   L+DA  +F+ +   D+VSW+A+IA     +  D
Sbjct: 244 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 303

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A++ + +M+   + PN +T+ S L ACA +     GR +H  ++    K   + G  LV
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQ 298
           D+Y   GS+DEAR +F  +  ++   W ++I G+ + G       L+  M     V   +
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 423

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
              S V+ + AS  A    +Q H+        SD  +  SL++ Y + G++E A ++F +
Sbjct: 424 IIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDK 483

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S+ D +A T++I  YA+ G    AL LY EM+     P       +L AC++    EQG
Sbjct: 484 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQG 543

Query: 419 KQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           KQ+ + I     M    A  S ++++ ++ G + DA+   + +P +   V+WS+++G   
Sbjct: 544 KQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASR 603

Query: 477 QHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCAC--NHAGLVA 517
            H   K A    GQ+ + D V P    L+S + A   N AG+ +
Sbjct: 604 IHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMAS 647



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 251/495 (50%), Gaps = 22/495 (4%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R+IH   I     +++F  N +V  Y K G++  A A F  I   +  SW +++     +
Sbjct: 44  RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQN 102

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIV 234
            H   AL L+++M   ++ PN   YT+ L ACA ++  E G+ +H  +   + +K D I+
Sbjct: 103 GHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVIL 159

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MYAKCGS+++A+ +F  M  +++ +WN +I+ + Q+G   EA  L+  M    V
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DV 216

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
                T ++VL + ++   +   +++HAL      E D  + N+L+  Y +C  ++DA K
Sbjct: 217 EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAK 276

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           IF+     D+V+ ++MI A+A+  L +EA++ Y +MQ   + P+ +  +S+L ACA++  
Sbjct: 277 IFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD 336

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              G+ VH  I+  G+      G +LV++Y   GS+D+A   F +I +R    W+ +IGG
Sbjct: 337 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGG 396

Query: 475 LAQHGRGKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            ++ G     L+++ +M     +P   I    V+ AC   G  A+A+     +E    I 
Sbjct: 397 YSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMIS 456

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG----------AARIYKN 583
                   ++++  R G  + A ++ D M  + +   W  L+           A  +YK 
Sbjct: 457 DFV-LATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHGEHGLALGLYKE 514

Query: 584 VEV-GQHAAEMLFAI 597
           +E+ G   +E+ F +
Sbjct: 515 MELEGAEPSELTFMV 529



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 22/193 (11%)

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L  C +L   E  +Q+H  I      ++ F GN +V  Y KCGS+  A  AF  I  +  
Sbjct: 34  LRQCQDL---ESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKND 89

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHF 523
            SW +M+   AQ+G  + AL ++ +M    + PN +   +VL AC     + E K  H  
Sbjct: 90  YSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSR 146

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG------- 576
            S  K   +  + E+   ++ +  + G  ++A  L + M  ++ +S W A++        
Sbjct: 147 ISGTKGLKLDVILEN--SLLTMYAKCGSLEDAKRLFERMSGRSVSS-WNAMIAAYAQSGH 203

Query: 577 ---AARIYKNVEV 586
              A R+Y++++V
Sbjct: 204 FEEAIRLYEDMDV 216


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/710 (36%), Positives = 412/710 (58%), Gaps = 36/710 (5%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  F L+ ++ A A SG     R++         D ++F+ NAL+   A    + D   +
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMERL 101

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMEL 212
           F  +   D VS+NA+I G         +++L++ +   E + P   T ++ +   + +  
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH---------------- 256
           + LG  +HC ++++   +   VG  LVDMYAK G + +AR +F                 
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 257 ---------------LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
                          LM +++ I W  +++G  QNG  +EA  +F  M  EGVG DQ T 
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L +  +  A+   KQ+HA   +T +E + ++ ++L+D Y KC  +  A  +F+  + 
Sbjct: 282 GSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++++ T+MI  Y Q    EEA++ + EMQ   I PD F   S++++CANL++ E+G Q 
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQF 401

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +  G M      N+LV +Y KCGSI+DA R F E+     VSW+A++ G AQ G+ 
Sbjct: 402 HCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KE + +F +ML +G+ P+ +T + VL AC+ AGLV +   +F+SM+K  GI P+ +HY C
Sbjct: 462 KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTC 521

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+  R+G+F+EA E +  MP   +A  W  LL + R+  N+E+G+ AAE L   +P+ 
Sbjct: 522 MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQN 581

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            +++VLL +++A+ G W  VA +RR M+D ++KKEPG SWI+ K+KV+ F+  D+SH  S
Sbjct: 582 PASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFS 641

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
             IY KL+ ++  + + GY P V + LHDV +++K  ++ HHSEKLA+AFGLI  P    
Sbjct: 642 SRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMP 701

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KNLR+CVDCH + +FISKI  R+I+VRD  RFH F +G+CSCG +W
Sbjct: 702 IRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 233/468 (49%), Gaps = 33/468 (7%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D + F  N+L+   A      D  RLF ++PER  VS+N+L + +        +V  ++ 
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 87  MVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           ++    +RP   +LS+MI   +   D  LG  +H   ++LG+ +  F  + LVDMYAK+G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAG---CVLHEHND-------------W--------- 180
            + DA  VF+++E   +V +N +I G   C + E                W         
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 181 ------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 AL +F++M++  +  + +T+ S L AC  +   E G+Q+H  + +   + +  V
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVDMY+KC S+  A  +F  M  +N+I+W  +I G+ QN    EA   F  M  +G+
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL +V+ S A+  ++    Q H L++ +       + N+L+  YGKCG +EDA +
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E S  D V+ T+++T YAQFG  +E + L+ +M    + PD      +L+AC+    
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGL 495

Query: 415 YEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            E+G      + K  G +        ++++Y++ G   +A+    ++P
Sbjct: 496 VEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 200/428 (46%), Gaps = 38/428 (8%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           D  LG  VH  V+  GF +  FV + LV MYAK G   D+RR+F  +  ++VV +N+L +
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 70  CYVHCDFLE-------------------------------EAVCFFKEMVLSGIRPNEFS 98
             + C  +E                               EA+  F+ M   G+  ++++
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
             S++ AC        G++IH Y  +  Y+ ++F  +ALVDMY+K  ++  A AVF+ + 
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             +I+SW A+I G   +  ++ A++ F +M+   I P+ FT  S + +CA +   E G Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
            HC  +   +     V   LV +Y KCGS+++A  +F  M   + ++W  +++G+ Q G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV-CKQVHALSVKTAFESDDYIVN 337
             E   LF  M   G+  D  T   VL + +    +   C    ++         D    
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 338 SLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFG---LGEEALKLYLEMQDR 393
            +ID Y + G  ++A +  K+   + D     +++++    G   +G+ A +  LE   +
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 394 EINPDSFV 401
             NP S+V
Sbjct: 581 --NPASYV 586



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 144/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G Q+H  +  T ++ + FV ++LV MY+KC +   +  +F  +  R+
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW ++   Y      EEAV  F EM + GI+P++F+L S+I++CA       G + H 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  +NALV +Y K G++EDA  +F ++   D VSW A++ G         
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M ++ + P+  T+   L AC+   L E G    C       K   IV +    
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG----CDYFDSMQKDHGIVPIDDHY 519

Query: 238 --LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
             ++D+Y++ G   EA      MP   +   W  ++S   +  G+ME
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS-CRLRGNME 565



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 64/272 (23%)

Query: 314 IGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           + V   VH L +KT  ++   +++N L+ AY K G +  A ++F E    +L    ++++
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 373 AYAQFGLGEEALKLYLEMQDRE--------------------------------INPDSF 400
           A A   L  +  +L+  M +R+                                + P   
Sbjct: 88  ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             S+++   + LS    G  VH  +++ GF +  F G+ LV+MYAK G I DA R F E+
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207

Query: 461 P-------------------------------DRGIVSWSAMIGGLAQHGRGKEALQMFG 489
                                           DR  ++W+ M+ GL Q+G   EAL +F 
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           +M  +GV  +  T  S+L AC     + E K 
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQ 299



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           VH  I+K F     TF  N L+  YAK G +  A R F E+PD  + + +A++  LA   
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              +  ++F  M E     + ++  +++   +  G  A +   + ++ ++  ++P +   
Sbjct: 94  LVPDMERLFASMPER----DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149

Query: 540 ACMI 543
           + MI
Sbjct: 150 SAMI 153


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/746 (35%), Positives = 435/746 (58%), Gaps = 2/746 (0%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + + F  + ++  Y K GN   +RR+FD   ER+VV+W ++   Y   +   +A   F E
Sbjct: 71  NRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAE 130

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M  SG +P+  +  +++  C     +    + H   +KLG+  +    N L+D Y K G 
Sbjct: 131 MHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGG 190

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L+ A  +F ++   D VS+N +I G   +  N+ A++LF +M++    P+ FT+ + + A
Sbjct: 191 LDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
             G++    G+Q+H  ++K     +  VG   +D Y+K   ++E R +F+ MPE + +++
Sbjct: 251 SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSY 310

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N++I+ +   G   E+  LF  +             T+L   AS   + + +Q+HA  V 
Sbjct: 311 NVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVV 370

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           +  + D  + NSL+D Y KCG  E+A +IF   S+   V  T+MI+A  Q GL E  LKL
Sbjct: 371 SMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKL 430

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + EM+   ++ D    + +L A ANL++   GKQ+H  +I+ GFM + ++G +L++MYA 
Sbjct: 431 FYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYAN 489

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           C SI DA + F E+ +R +V+W+A++   AQ+G GK  L+ F +M+  G  P+ ++ + +
Sbjct: 490 CASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCI 549

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+H  LV E   +F  M   + + P +EHY  M+D L R+G+F EA +L+  MPF+ 
Sbjct: 550 LTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEP 609

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVR 625
           +  VW ++L + RI+KN  + + AA  LF ++  + ++ +V +SNI+A AG WD+V KV+
Sbjct: 610 DEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVK 669

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  ++K P  SW+E+K KV+ F+  D  H +  EI  K++ +++ + K GY P + 
Sbjct: 670 KAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDIS 729

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
               +V++  K   L +HSE+LA+AF LI TP G+ I V KNLR C DCH + + ISKIV
Sbjct: 730 CAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIV 789

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI VRD NRFHHFR+GSCSCG YW
Sbjct: 790 GREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 266/550 (48%), Gaps = 41/550 (7%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q H  +V  G   +  V N+L+  Y K G    +RRLF  +     VS+N + + Y +  
Sbjct: 161 QAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNG 220

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EEA+  F EM   G +P++F+ +++I+A  G  D+  G++IHG+ +K  +  ++F  N
Sbjct: 221 LNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGN 280

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           A +D Y+K   + +   +F ++   D VS+N +I           ++ LFQ+++ +  + 
Sbjct: 281 AFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDR 340

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
             F + + L   A     ++GRQLH  ++      D  V   LVDMYAKCG  +EA  IF
Sbjct: 341 KNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIF 400

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             +  ++ + W  +IS ++Q G       LF  M R  V  DQ T + VLK+ A+  +I 
Sbjct: 401 LRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASIL 460

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQ+H+  +++ F  + Y   +L+D Y  C  ++DA+K F+E S  ++V   ++++AYA
Sbjct: 461 LGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYA 519

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G G+  LK + EM      PDS     +L AC++    E+G       +K+       
Sbjct: 520 QNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEG-------LKY------- 565

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
                          +D    ++  P R    ++AM+  L + GR  EA ++ GQM  + 
Sbjct: 566 --------------FNDMSGVYNLAPKRE--HYTAMVDALCRSGRFDEAEKLMGQMPFE- 608

Query: 496 VLPNHITLVSVLCACN---HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             P+ I   SVL +C    +  L  +A     +M+      P    Y  M +I   AG++
Sbjct: 609 --PDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAP----YVTMSNIFAEAGQW 662

Query: 553 QEAMELVDTM 562
              +++   M
Sbjct: 663 DSVVKVKKAM 672



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 223/473 (47%), Gaps = 50/473 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ A     D   G Q+HG VV T F  + FV N+ +  Y+K     + R+LF+ +PE  
Sbjct: 247 VISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELD 306

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + + Y     ++E++  F+E+  +      F   +M++  A S D  +GR++H 
Sbjct: 307 GVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHA 366

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +    D D   +N+LVDMYAK G  E+A  +F  +     V W A+I+  V    ++ 
Sbjct: 367 QVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHEN 426

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK---MEIKSDPIVGVG 237
            LKLF +M+ + ++ +  T+   LKA A +    LG+QLH  +I+   M + S    G  
Sbjct: 427 GLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYS----GCA 482

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+DMYA C S+ +A   F  M E+N++ WN ++S + QNG              +G G  
Sbjct: 483 LLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNG--------------DGKG-- 526

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
                    ++ SF+ +          + + ++ D      ++ A   C  VE+ +K F 
Sbjct: 527 ---------TLKSFEEM----------IMSGYQPDSVSFLCILTACSHCRLVEEGLKYFN 567

Query: 358 ESSAVDLVAC-----TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           + S V  +A      T+M+ A  + G  +EA KL  +M      PD  V +S+LN+C   
Sbjct: 568 DMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQM---PFEPDEIVWTSVLNSCRIH 624

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
             Y   ++    +     + D     ++ N++A+ G  D   +    + DRG+
Sbjct: 625 KNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGV 677



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 171/375 (45%), Gaps = 38/375 (10%)

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG---------DMEAASLFPW-------- 288
           G + +AR +   MP +N  + +I+ISG++++G          D +  ++  W        
Sbjct: 57  GQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYS 116

Query: 289 --------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
                         M+R G   D  T  T+L      +      Q HA  VK     +  
Sbjct: 117 KSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHR 176

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+L+D+Y K G ++ A ++F E    D V+   MIT YA  GL EEA++L++EMQ+  
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLG 236

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
             P  F  +++++A   L     G+Q+H  ++K  F+ + F GN+ ++ Y+K   +++  
Sbjct: 237 FKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVR 296

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           + F+E+P+   VS++ +I   A  G+ KE++ +F Q L+             + +   + 
Sbjct: 297 KLFNEMPELDGVSYNVIITAYAWVGKVKESIDLF-QELQFTTFDRKNFPFPTMLSIAASS 355

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           L  +      +        P       ++D+  + GKF+EA  +   +  ++    W A+
Sbjct: 356 LDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP-WTAM 414

Query: 575 LGAARIYKNVEVGQH 589
           + A     NV+ G H
Sbjct: 415 ISA-----NVQRGLH 424


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/801 (35%), Positives = 440/801 (54%), Gaps = 55/801 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + A  + ++L    QVH      G   +  VAN L+  Y+      D+  LFD +  R  
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144

Query: 62  VSWNSLFSCYVHC-DFLEEAVCF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           VSW+ +   +    D++    CF  F+E++  G RP+ ++L  +I AC         R +
Sbjct: 145 VSWSVMVGGFAKVGDYIN---CFGTFRELIRCGARPDNYTLPFVIRAC---------RDL 192

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
               +            ALVDMY K   +EDA  +F  ++  D+V+W  +I G       
Sbjct: 193 KNLQM------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKA 240

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + +L LF++M+   + P+     + + ACA +      R +   + + + + D I+G  +
Sbjct: 241 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 300

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKCG ++ AR IF  M EKN+I+W+ +I+ +  +G   +A  LF  M   G+  D+
Sbjct: 301 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 360

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL+++L +  + + +   +QVHA +       +  + N L+  Y     ++DA  +F  
Sbjct: 361 ITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDG 420

Query: 359 SSAVDLVACTSMITAYAQFG----------------------------LGEEALKLYLEM 390
               D V+ + M+  +A+ G                               E+L L+ +M
Sbjct: 421 MCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKM 480

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           ++  + PD     +++ ACA L A  + + +  +I +  F  D   G ++++M+AKCG +
Sbjct: 481 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 540

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + A   F  + ++ ++SWSAMI     HG+G++AL +F  ML  G+LPN ITLVS+L AC
Sbjct: 541 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 600

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +HAGLV E    F  M + + ++   +HY C++D+LGRAG+  EA++L+++M  + +  +
Sbjct: 601 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL 660

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           WGA LGA R +K+V + + AA  L  ++P+    ++LLSNIYA+AG W++VAK R  M  
Sbjct: 661 WGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQ 720

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
            +LKK PG +WIEV +K + F+VGD +H RSKEIY  L  + + L   GYVP     LHD
Sbjct: 721 RRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHD 780

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V+E  K  +LY HSEKLA+AFGLIATP    IR+ KNLR+C DCHT  + +S I  R II
Sbjct: 781 VDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVII 840

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           VRD NRFHHF+ G+CSCG YW
Sbjct: 841 VRDANRFHHFKEGACSCGDYW 861



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 30/296 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC + ++L    QVH      G   +  VAN LV  Y+      D+  LFD +  R 
Sbjct: 366 LLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRD 425

Query: 61  VVSWNSL----------FSCY------------------VHCDFLEEAVCFFKEMVLSGI 92
            VSW+ +           +C+                    C    E++  F +M   G+
Sbjct: 426 SVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGV 485

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            P++ ++ +++ ACA  G     R I  Y  +  +  D+    A++DM+AK G +E A  
Sbjct: 486 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 545

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +E  +++SW+A+IA    H     AL LF  M  S I PN  T  S L AC+   L
Sbjct: 546 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 605

Query: 213 KELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEA-RMIFHLMPEKNLIAW 266
            E G +    + +   +++D      +VD+  + G +DEA ++I  +  EK+   W
Sbjct: 606 VEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLW 661


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/746 (36%), Positives = 433/746 (58%), Gaps = 31/746 (4%)

Query: 31   FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
            F  N ++  Y+  G+   ++ LF + P R+  +W  +   +       +A+  F+ M+  
Sbjct: 289  FSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGE 348

Query: 91   GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
            G+ P+  ++++++N    +  SL     H ++IK G D+ +F  N L+D Y K G L  A
Sbjct: 349  GVIPDRVTVTTVLNLPGCTVPSL-----HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 403

Query: 151  VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS---SEINPNMFTYTSALKAC 207
              VF ++   D V++NA++ GC     +  AL+LF  M+    S    ++  Y+ +    
Sbjct: 404  RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHS---- 459

Query: 208  AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
                     R    S++ +       V   L+D Y+KC  +D+ R +F  MPE++ +++N
Sbjct: 460  ---------RSRSTSVLNV------FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 504

Query: 268  IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSV 325
            ++I+ +  N        LF  M +  +GFD+  L  +T+L    S   + + KQ+HA  V
Sbjct: 505  VIIAAYAWNQCAATVLRLFREMQK--LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 562

Query: 326  KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
                 S+D + N+LID Y KCG ++ A   F   S    ++ T++IT Y Q G  EEAL+
Sbjct: 563  LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 622

Query: 386  LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
            L+ +M+   + PD    SS++ A ++L+    G+Q+H ++I+ G+ S  F+G+ LV+MYA
Sbjct: 623  LFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYA 682

Query: 446  KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
            KCG +D+A R F E+P+R  +SW+A+I   A +G  K A++MF  ML  G  P+ +T +S
Sbjct: 683  KCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLS 742

Query: 506  VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
            VL AC+H GL  E   +F  M+ ++ I P +EHYAC+ID LGR G F +  +++  MPF+
Sbjct: 743  VLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 802

Query: 566  ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
            A+  +W ++L + RI+ N E+ + AA+ LF +EP  ++ +V+LSNIYA AG W++ A V+
Sbjct: 803  ADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 862

Query: 626  RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
            + M+D  ++KE G SW+E+K K+Y+F   D +     EI  +LD +   ++K GY P + 
Sbjct: 863  KIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDIT 922

Query: 686  TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
              LH V+   K + L +HSE+LA+AF L+ TP G  IR+ KNL  C+DCH   + ISKIV
Sbjct: 923  CALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIV 982

Query: 746  SREIIVRDVNRFHHFRNGSCSCGGYW 771
            +R+IIVRD  RFHHF++G CSCG YW
Sbjct: 983  NRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 238/466 (51%), Gaps = 20/466 (4%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H   +  G D+  FV N+L+  Y K G    +RR+F  + ++  V++N++         
Sbjct: 371 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
             +A+  F  M  +G   +   L    ++ + S   L                ++F  N+
Sbjct: 431 HTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVL----------------NVFVNNS 474

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+D Y+K   L+D   +F ++   D VS+N +IA    ++     L+LF++M+    +  
Sbjct: 475 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           +  Y + L     +    +G+Q+H  L+ + + S+ ++G  L+DMY+KCG +D A+  F 
Sbjct: 535 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 594

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
              EK+ I+W  +I+G++QNG   EA  LF  M R G+  D+ T S+++K+ +S   IG+
Sbjct: 595 NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 654

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +Q+H+  +++ ++S  +  + L+D Y KCG +++A++ F E    + ++  ++I+AYA 
Sbjct: 655 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 714

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
           +G  + A+K++  M     NPDS    S+L AC++    ++  + + H++K  +    + 
Sbjct: 715 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSISPWK 773

Query: 437 GN--SLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHG 479
            +   +++   + G      +   E+P +   + W++++     HG
Sbjct: 774 EHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHG 819



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 33/286 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L    S  D+ +G Q+H  +V  G  S++ + N+L+ MY+KCG    ++  F    E+S
Sbjct: 541 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 600

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SW +L + YV     EEA+  F +M  +G+RP+  + SS+I A +      LGR++H 
Sbjct: 601 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 660

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y I+ GY S +FS + LVDMYAK G L++A+  F ++   + +SWNAVI+    +     
Sbjct: 661 YLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKN 720

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKE-------------------------- 214
           A+K+F+ M     NP+  T+ S L AC+   L +                          
Sbjct: 721 AIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVI 780

Query: 215 --LGR-----QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             LGR     Q+   L++M  K+DPI+   ++      G+ + AR+
Sbjct: 781 DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV 826


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/627 (41%), Positives = 381/627 (60%), Gaps = 1/627 (0%)

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G++  A   F+++  PDI+ WNA+I G       D  ++++  M+ S+++PN FT+   L
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
           KAC G  ++ +G+Q+H    K    S+  V   LV MYAK G +  AR++F  + ++ ++
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +W  +ISG++QNG  MEA ++F  M +  V  D   L +V+ +  + + +G  K +H L 
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
            K   E +  IV SL   Y K G VE A   F      +L+   +MI+ YA  G GEEA+
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           KL+ EM  + I  DS    S + A A + + E  + +  +I K  +  DTF    L++MY
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 332

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           AKCGSI  A   F  + D+ +V WS MI G   HG G+EA+ ++ +M + GV PN  T +
Sbjct: 333 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 392

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            +L AC ++GLV E    F  M    GI+P  +HY+C++D+LGRAG   +A + + +MP 
Sbjct: 393 GLLTACKNSGLVKEGWELFHLMPDH-GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 451

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           +   SVWGALL A +I++ V +G+ AAE LF ++P  +  +V LSN+YASA +W  VA V
Sbjct: 452 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 511

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  M    L K+ G S IE+   + TF VGDRSH +SKEI+ +LD +   L  AGYVP +
Sbjct: 512 RLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHM 571

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
           E+ LHD+   E E+ L HHSE+LAVA+G+I+T PG T+R+ KNLR C++CH++ + ISK+
Sbjct: 572 ESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKL 631

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V REII+RD  RFHHF++G CSCG +W
Sbjct: 632 VDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 230/466 (49%), Gaps = 1/466 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           QV+  ++ +G     F+    +      G+   + + F  + E  ++ WN++   Y   +
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            ++  +  + +M +S + PN F+   ++ AC G+    +G++IHG + K G+ S++F  N
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +LV MYAK G +  A  VF  +    +VSW ++I+G V +     AL +F++M+   + P
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +     S + A   +E    G+ +H  + K+ ++ +P + + L  MYAK G ++ AR  F
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           + M + NLI WN +ISG+  NG   EA  LF  M  + +  D  T+ + + + A   ++ 
Sbjct: 245 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 304

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + + +     K+ +  D ++   LID Y KCG +  A  +F   +  D+V  + MI  Y 
Sbjct: 305 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 364

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G+EA+ LY EM+   + P+      LL AC N    ++G ++   +   G      
Sbjct: 365 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQ 424

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGR 480
             + +V++  + G ++ A      +P + G+  W A++     H +
Sbjct: 425 HYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRK 470



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 187/352 (53%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC       +G Q+HG     GF S+ FV NSLV MYAK G    +R +FD + +R+
Sbjct: 91  VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT 150

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S YV      EA+  FKEM    ++P+  +L S++ A     D   G+ IHG
Sbjct: 151 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 210

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              KLG + +     +L  MYAK G +E A   F  +E P+++ WNA+I+G   + + + 
Sbjct: 211 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 270

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KLF++M +  I  +  T  SA+ A A +   EL R L   + K E + D  V  GL+D
Sbjct: 271 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 330

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  AR +F  + +K+++ W+++I G+  +G   EA  L+  M + GV  +  T
Sbjct: 331 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 390

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
              +L +  +   +    ++  L      E      + ++D  G+ G++  A
Sbjct: 391 FIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 442



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 5/276 (1%)

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           QV+   + +      +++   I+A    G V  A K F+E S  D++   ++I  Y Q  
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           + +  +++Y++MQ  +++P+ F    +L AC   S    GKQ+H    K+GF S+ F  N
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           SLV+MYAK G I  A   F ++ DR +VSW+++I G  Q+G   EAL +F +M +  V P
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           + I LVSV+ A  +   + + K     +  K G++   +    +  +  + G  + A   
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGK-SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
            + M  + N  +W A++     Y N   G+ A ++ 
Sbjct: 244 FNRME-KPNLILWNAMISG---YANNGYGEEAIKLF 275


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/733 (37%), Positives = 419/733 (57%), Gaps = 5/733 (0%)

Query: 44  GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
           G    +R++FD IP     ++N+L   Y        A+  ++ M+   + PN+++   ++
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
            AC+   D   GR IH ++  +G  +D+F + AL+D+Y +      A  VF  +   D+V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 164 SWNAVIAGCVLHEHNDWALK-LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           +WNA++AG   H     A+  L        + PN  T  S L   A       G  +H  
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 223 LIKMEIKSDP---IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
            ++  +  +    ++G  L+DMYAKC  +  A  +FH M  +N + W+ +I G +     
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 280 MEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            EA +LF  M  EG+ F   T++++ L+  AS   + +  Q+HAL  K+   +D    NS
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y K G + +A  +F E +  D ++  ++++ Y Q G  EEA  ++ +MQ   + PD
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                SL+ AC++L+A + G+  H  +I  G   +T   NSL++MYAKCG ID + + F 
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFD 466

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           ++P R IVSW+ MI G   HG GKEA  +F  M   G  P+ +T + ++ AC+H+GLV E
Sbjct: 467 KMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTE 526

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            KH F++M  K+GI P  EHY CM+D+L R G   EA + + +MP +A+  VWGALLGA 
Sbjct: 527 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+KN+++G+  + M+  + PE +   VLLSNI+++AG +D  A+VR   K    KK PG
Sbjct: 587 RIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 646

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            SWIE+   ++ F  GD+SH  S +IY +LD +   + K GY       L D+EE EKE+
Sbjct: 647 CSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEK 706

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L +HSEKLA+AFG+++     TI V KNLR+C DCHT+ ++++ + +R IIVRD NRFH
Sbjct: 707 ALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFH 766

Query: 759 HFRNGSCSCGGYW 771
           HF+NG CSCG +W
Sbjct: 767 HFKNGQCSCGDFW 779



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/532 (29%), Positives = 266/532 (50%), Gaps = 15/532 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC++  DL  G  +H      G  +D FV+ +L+ +Y +C  F  +  +F  +P R 
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN++ + Y +      A+    +M    G+RPN  +L S++   A  G    G  +H
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224

Query: 120 GYSIKLGYDSD---MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            Y ++   D +   +    AL+DMYAK  +L  A  VF  +   + V+W+A+I G VL +
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCD 284

Query: 177 HNDWALKLFQQMKSSEIN-PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
               A  LF+ M    +   +  +  SAL+ CA +    +G QLH  L K  I +D   G
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MYAK G ++EA M+F  +  K+ I++  ++SG++QNG   EA  +F  M    V 
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  T+ +++ + +   A+   +  H   +      +  I NSLID Y KCG ++ + ++
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQV 464

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLS 413
           F +  A D+V+  +MI  Y   GLG+EA  L+L M+++   PD  +F+C  L+ AC++  
Sbjct: 465 FDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFIC--LIAACSHSG 522

Query: 414 AYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAM 471
              +GK        K+G +        +V++ A+ G +D+A +    +P +  V  W A+
Sbjct: 523 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGAL 582

Query: 472 IGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           +G    H     GK+  +M  ++  +G   N + L ++  A       AE +
Sbjct: 583 LGACRIHKNIDLGKQVSRMIQKLGPEGT-GNFVLLSNIFSAAGRFDEAAEVR 633


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/627 (41%), Positives = 381/627 (60%), Gaps = 1/627 (0%)

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G++  A   F+++  PDI+ WNA+I G       D  ++++  M+ S+++PN FT+   L
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
           KAC G  ++ +G+Q+H    K    S+  V   LV MYAK G +  AR++F  + ++ ++
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +W  +ISG++QNG  MEA ++F  M +  V  D   L +V+ +  + + +G  K +H L 
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
            K   E +  IV SL   Y K G VE A   F      +L+   +MI+ YA  G GEEA+
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           KL+ EM  + I  DS    S + A A + + E  + +  +I K  +  DTF    L++MY
Sbjct: 288 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 347

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           AKCGSI  A   F  + D+ +V WS MI G   HG G+EA+ ++ +M + GV PN  T +
Sbjct: 348 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 407

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            +L AC ++GLV E    F  M    GI+P  +HY+C++D+LGRAG   +A + + +MP 
Sbjct: 408 GLLTACKNSGLVKEGWELFHLMPDH-GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 466

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           +   SVWGALL A +I++ V +G+ AAE LF ++P  +  +V LSN+YASA +W  VA V
Sbjct: 467 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 526

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  M    L K+ G S IE+   + TF VGDRSH +SKEI+ +LD +   L  AGYVP +
Sbjct: 527 RLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHM 586

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
           E+ LHD+   E E+ L HHSE+LAVA+G+I+T PG T+R+ KNLR C++CH++ + ISK+
Sbjct: 587 ESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKL 646

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V REII+RD  RFHHF++G CSCG +W
Sbjct: 647 VDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 230/466 (49%), Gaps = 1/466 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           QV+  ++ +G     F+    +      G+   + + F  + E  ++ WN++   Y   +
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            ++  +  + +M +S + PN F+   ++ AC G+    +G++IHG + K G+ S++F  N
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +LV MYAK G +  A  VF  +    +VSW ++I+G V +     AL +F++M+   + P
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +     S + A   +E    G+ +H  + K+ ++ +P + + L  MYAK G ++ AR  F
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 259

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           + M + NLI WN +ISG+  NG   EA  LF  M  + +  D  T+ + + + A   ++ 
Sbjct: 260 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 319

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + + +     K+ +  D ++   LID Y KCG +  A  +F   +  D+V  + MI  Y 
Sbjct: 320 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 379

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G+EA+ LY EM+   + P+      LL AC N    ++G ++   +   G      
Sbjct: 380 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQ 439

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGR 480
             + +V++  + G ++ A      +P + G+  W A++     H +
Sbjct: 440 HYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRK 485



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 187/352 (53%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC       +G Q+HG     GF S+ FV NSLV MYAK G    +R +FD + +R+
Sbjct: 106 VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT 165

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S YV      EA+  FKEM    ++P+  +L S++ A     D   G+ IHG
Sbjct: 166 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 225

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              KLG + +     +L  MYAK G +E A   F  +E P+++ WNA+I+G   + + + 
Sbjct: 226 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 285

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KLF++M +  I  +  T  SA+ A A +   EL R L   + K E + D  V  GL+D
Sbjct: 286 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 345

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  AR +F  + +K+++ W+++I G+  +G   EA  L+  M + GV  +  T
Sbjct: 346 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 405

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
              +L +  +   +    ++  L      E      + ++D  G+ G++  A
Sbjct: 406 FIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 457



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 5/276 (1%)

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           QV+   + +      +++   I+A    G V  A K F+E S  D++   ++I  Y Q  
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           + +  +++Y++MQ  +++P+ F    +L AC   S    GKQ+H    K+GF S+ F  N
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           SLV+MYAK G I  A   F ++ DR +VSW+++I G  Q+G   EAL +F +M +  V P
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           + I LVSV+ A  +   + + K     +  K G++   +    +  +  + G  + A   
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGK-SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
            + M  + N  +W A++     Y N   G+ A ++ 
Sbjct: 259 FNRME-KPNLILWNAMISG---YANNGYGEEAIKLF 290


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/729 (38%), Positives = 408/729 (55%), Gaps = 90/729 (12%)

Query: 45  NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMIN 104
           N   +R LFD +PER VVSWN++ S Y    +++EA   F EM       N  S + M+ 
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 100

Query: 105 ACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS 164
           A   +G     R++     +   D ++ S N ++  Y K   L DA  +F  +   D VS
Sbjct: 101 AYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 156

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           WN +I+G   +     A +LF++    ++    FT+T+                      
Sbjct: 157 WNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTA---------------------- 190

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
                        +V  Y + G +DEAR +F  MPEKN ++WN +I+G++Q     +A  
Sbjct: 191 -------------MVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 237

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           LF  M                           C+ V +              N++I  Y 
Sbjct: 238 LFEAM--------------------------PCQNVSSW-------------NTMITGYA 258

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVC 402
           + G +  A   F      D ++  ++I  YAQ G GEEAL L++EM+     +N  +F  
Sbjct: 259 QNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF-- 316

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           +S L+ CA ++A E GKQVH  ++K G  S  + GN+L+ MY KCG+IDDA   F  I +
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 376

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           + +VSW+ MI G A+HG GKEAL +F  M + G+LP+ +T+V VL AC+H GLV +   +
Sbjct: 377 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 436

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           F SM + +GI    +HY CMID+LGRAG+  +A  L+  MPF+ +A+ WGALLGA+RI+ 
Sbjct: 437 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N E+G+ AA+M+F +EP+ S  +VLLSN+YA++G W +V ++R  M+D  +KK PG SW+
Sbjct: 497 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 556

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           EV++K++TFTVGD  H     IY  L+E+   + K GYV   +  LHDVEE EK  +L +
Sbjct: 557 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 616

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLAVAFG++A P G  IRV KNLR+C DCH + + ISKIV R II+RD +RFHHF  
Sbjct: 617 HSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNG 676

Query: 763 GSCSCGGYW 771
           G CSCG YW
Sbjct: 677 GQCSCGDYW 685



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 238/493 (48%), Gaps = 75/493 (15%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE------- 86
           N+++  YA+ G   +++ +FD +P ++ +SWN + + YV    +E+A   F+        
Sbjct: 65  NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELI 124

Query: 87  ----MVLSGIRPN----------------EFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
               M+   ++ N                E S ++MI+  A +G+ L  +++   S    
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPV-- 182

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
              D+F+  A+V  Y + G L++A  VF  +   + VSWNA+IAG V  +  D A +LF+
Sbjct: 183 --RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 240

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
            M       N+ ++ +                                   ++  YA+ G
Sbjct: 241 AMPCQ----NVSSWNT-----------------------------------MITGYAQNG 261

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            + +AR  F  MP+++ I+W  +I+G+ Q+G   EA  LF  M R+G   +++T ++ L 
Sbjct: 262 DIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLS 321

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + A   A+ + KQVH   VK   ES  Y+ N+L+  Y KCG+++DA  +F+     ++V+
Sbjct: 322 TCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVS 381

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             +MI  YA+ G G+EAL L+  M+   I PD      +L+AC++    ++G +    + 
Sbjct: 382 WNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMT 441

Query: 427 K-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR---G 481
           + +G  +++     ++++  + G +DDA      +P +    +W A++G    HG    G
Sbjct: 442 QDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELG 501

Query: 482 KEALQMFGQMLED 494
           ++A +M  +M  D
Sbjct: 502 EKAAKMIFEMEPD 514



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 182/370 (49%), Gaps = 13/370 (3%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + DE   N+++  YA+ G  ++++RLF+  P R V +W ++ S YV    L+EA   F  
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M       N  S +++I            R++     +     ++ S N ++  YA+ G+
Sbjct: 211 MP----EKNSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWNTMITGYAQNGD 262

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +  A   F  +   D +SW A+IAG     + + AL LF +MK      N  T+TS L  
Sbjct: 263 IAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLST 322

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA +   ELG+Q+H  ++K  ++S   VG  L+ MY KCG++D+A ++F  + EK +++W
Sbjct: 323 CAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSW 382

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ-VHALSV 325
           N +I+G+ ++G   EA  LF  M + G+  D  T+  VL + +    +    +  ++++ 
Sbjct: 383 NTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQ 442

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLGE 381
                ++      +ID  G+ G ++DA  + K    E  A    A       +    LGE
Sbjct: 443 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 502

Query: 382 EALKLYLEMQ 391
           +A K+  EM+
Sbjct: 503 KAAKMIFEME 512



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 15/218 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L  C     L LG QVHG VV  G +S  +V N+L+VMY KCGN  D+  +F+ I E+ 
Sbjct: 319 TLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKE 378

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN++ + Y    F +EA+  F+ M  +GI P++ ++  +++AC+ +G    G + + 
Sbjct: 379 VVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE-YF 437

Query: 121 YSIKLGYDSDMFSANA-----LVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
           YS+   Y     +AN+     ++D+  + G L+DA  + K++   PD  +W A++    +
Sbjct: 438 YSMTQDYG---ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494

Query: 175 H---EHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           H   E  + A K+  +M+    N  M+   S L A +G
Sbjct: 495 HGNTELGEKAAKMIFEMEPD--NSGMYVLLSNLYAASG 530


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 288/773 (37%), Positives = 433/773 (56%), Gaps = 53/773 (6%)

Query: 50  RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
           RRL  +    +V  WN L    VH  FLE+ +  ++ M   G RP+ ++   ++ AC   
Sbjct: 82  RRLHPS--SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEI 139

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP---DIVSWN 166
                G  +H      G++ ++F  N LV MY + G  E+A  VF ++      D+VSWN
Sbjct: 140 PSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWN 199

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           +++A  +    +  A+K+F++M     I P+  +  + L ACA +     G+Q+H   ++
Sbjct: 200 SIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALR 259

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
             +  D  VG  +VDMYAKCG M+EA  +F  M  K++++WN +++G+ Q G   +A  L
Sbjct: 260 SGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGL 319

Query: 286 FPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVCKQV--------------------- 320
           F  +  E +  +  T S V+   A     F+A+ V +Q+                     
Sbjct: 320 FEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCAL 379

Query: 321 ------------HALSVKTAFESDD-----YIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
                       HA+      + +D      ++N+LID Y KC   + A  +F      D
Sbjct: 380 AGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKD 439

Query: 364 --LVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGK 419
             +V  T +I   AQ G   EAL+L+ +M   D  + P++F  S  L ACA L A   G+
Sbjct: 440 RSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGR 499

Query: 420 QVHVHIIKFGFMSDT-FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           Q+H ++++  F S   F  N L++MY+K G +D A   F  +  R  VSW++++ G   H
Sbjct: 500 QIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMH 559

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG+EALQ+F +M + G++P+ +T V VL AC+H+G+V +  ++F  M K FG+ P  EH
Sbjct: 560 GRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEH 619

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YACM+D+L RAG+  EAMEL+  MP +   +VW ALL A R+Y NVE+G++AA  L  +E
Sbjct: 620 YACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELE 679

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
                ++ LLSNIYA+A  W +VA++R  MK+  +KK PG SW++ +    TF  GD SH
Sbjct: 680 SGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSH 739

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             S++IY  L ++   +   GYVP     LHDV++ EK  LL  HSEKLA+A+G++ T P
Sbjct: 740 PMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAP 799

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GA IR+ KNLR C DCH++F +IS I+  EIIVRD +RFHHF+NGSCSC GYW
Sbjct: 800 GAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 169/525 (32%), Positives = 267/525 (50%), Gaps = 53/525 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC        G  VH +V  +GF+ + FV N LV MY +CG + ++R++FD + ER 
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191

Query: 61  V---VSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGR 116
           V   VSWNS+ + Y+       A+  F+ M    GIRP+  SL +++ ACA  G    G+
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++HGY+++ G   D+F  NA+VDMYAK G +E+A  VF+ ++  D+VSWNA++ G     
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311

Query: 177 HNDWALKLFQQMKSSEI-----------------------------------NPNMFTYT 201
             D AL LF++++  +I                                    PN+ T  
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371

Query: 202 SALKACAGMELKELGRQLHCSLIKMEI---KSDP----IVGVGLVDMYAKCGSMDEARMI 254
           S L  CA       G++ HC  IK  +   ++DP    +V   L+DMY+KC S   AR +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431

Query: 255 FHLMPEKN--LIAWNIVISGHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVAS 310
           F L+P K+  ++ W ++I G+ Q+G   EA  LF  M +    V  +  T+S  L + A 
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491

Query: 311 FQAIGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
             A+   +Q+HA  ++  FES   ++ N LID Y K G V+ A  +F      + V+ TS
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-F 428
           ++T Y   G GEEAL+++ EMQ   + PD      +L AC++    +QG      + K F
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMI 472
           G +        +V++ ++ G +D+A      +P +   + W A++
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALL 656



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 215/448 (47%), Gaps = 62/448 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           VL AC S      G QVHG  + +G   D FV N++V MYAKCG                
Sbjct: 237 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 296

Query: 45  ---------------NFIDSRRLFDAIPER----SVVSWNSLFSCYVHCDFLEEAVCFFK 85
                           F D+  LF+ I E     +VV+W+++ + Y       EA+  F+
Sbjct: 297 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 356

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDS-----DMFSANALV 138
           +M L G  PN  +L S+++ CA +G  L G++ H ++IK  L  D      D+   NAL+
Sbjct: 357 QMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 416

Query: 139 DMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSE--IN 194
           DMY+K  + + A A+F  I   D  +V+W  +I G   H   + AL+LF QM   +  + 
Sbjct: 417 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 476

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGVGLVDMYAKCGSMDEARM 253
           PN FT + AL ACA +     GRQ+H  +++   +S  + V   L+DMY+K G +D AR+
Sbjct: 477 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARV 536

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M ++N ++W  +++G+  +G   EA  +F  M + G+  D  T   VL + +    
Sbjct: 537 VFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSH--- 593

Query: 314 IGVCKQVHALSVKTAFESDDYIVNS------LIDAYGKCGHVEDAVKIFK----ESSAVD 363
            G+  Q   ++       D  +V        ++D   + G +++A+++ +    + +   
Sbjct: 594 SGMVDQ--GINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAV 651

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQ 391
            VA  S    YA   LGE A    LE++
Sbjct: 652 WVALLSACRVYANVELGEYAANQLLELE 679



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 12/333 (3%)

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH-LMP 259
           ++    C  +   EL   +H  L+   +  DP     ++ MY    S  +A  +   L P
Sbjct: 33  STLFHQCKSLASAEL---IHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHP 86

Query: 260 EKNLI-AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
             + +  WN +I   +  G   +   L+  M R G   D  T   VLK+     +     
Sbjct: 87  SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 146

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---KESSAVDLVACTSMITAYA 375
            VHA+   + FE + ++ N L+  YG+CG  E+A ++F   +E    DLV+  S++ AY 
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 206

Query: 376 QFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           Q G    A+K++  M +D  I PD+    ++L ACA++ A+ +GKQVH + ++ G   D 
Sbjct: 207 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F GN++V+MYAKCG +++A++ F  +  + +VSW+AM+ G +Q GR  +AL +F ++ E+
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
            +  N +T  +V+      GL  EA   F  M 
Sbjct: 327 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMR 359



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 8/213 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDE-FVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L AC     L  G Q+H  V+   F+S   FVAN L+ MY+K G+   +R +FD + +R+
Sbjct: 486 LMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 545

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
            VSW SL + Y      EEA+  F EM   G+ P+  +   ++ AC+ SG    G    +
Sbjct: 546 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFN 605

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH--- 175
           G +   G          +VD+ ++ G L++A+ + + +   P    W A+++ C ++   
Sbjct: 606 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANV 665

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           E  ++A     +++S   N   +T  S + A A
Sbjct: 666 ELGEYAANQLLELESG--NDGSYTLLSNIYANA 696


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/757 (37%), Positives = 449/757 (59%), Gaps = 11/757 (1%)

Query: 24   TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
            +GF  D +V ++LV  +A+ G    ++ +F  + +R+ V+ N L          EEA   
Sbjct: 380  SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKV 439

Query: 84   FKEMVLSGIRPNEFSLSSMINACAGSGD----SLLGRKIHGYSIKLGY-DSDMFSANALV 138
            FKEM    +  N  SL  +++      +       G+++H Y  + G  D+ +   NALV
Sbjct: 440  FKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALV 498

Query: 139  DMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
            +MY K   +++A +VF+ +   D VSWN++I+G   +E  + A+  F  MK + + P+ F
Sbjct: 499  NMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 558

Query: 199  TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
            +  S L +C+ +    LGRQ+H    K  +  D  V   L+ +YA+  S++E + +F  M
Sbjct: 559  SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 618

Query: 259  PEKNLIAWNIVISGHLQ-NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
            PE + ++WN  I    +     ++A   F  M + G   ++ T   +L +V+SF  +G+ 
Sbjct: 619  PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 678

Query: 318  KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQ 376
             Q+HAL +K +   D+ I N+L+  YGKC  +ED   IF + S   D V+  SMI+ Y  
Sbjct: 679  HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 738

Query: 377  FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             G+  +A+ L   M  R    D F  +++L+ACA+++  E+G +VH   ++    SD   
Sbjct: 739  SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798

Query: 437  GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            G++LV+MYAKCG ID A R F  +P R I SW++MI G A+HG G++AL++F +M + G 
Sbjct: 799  GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858

Query: 497  LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
             P+H+T V VL AC+H GLV E   HF+SM + +G+ P  EH++CM+D+LGRAG  ++  
Sbjct: 859  SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIE 918

Query: 557  ELVDTMPFQANASVWGALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
            + + TMP   N  +W  +LGA      +N E+GQ AA+ML  +EP+ +  +VLLSN++A+
Sbjct: 919  DFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAA 978

Query: 615  AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
             G W++V + R  M+   +KK+ G SW+ +KD V+ F  GD++H   ++IY KL E+ + 
Sbjct: 979  GGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNK 1038

Query: 675  LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
            +  AGYVP  +  L+D+E   KE+LL +HSEKLA+AF ++       IR+ KNLR+C DC
Sbjct: 1039 IRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRVCGDC 1097

Query: 735  HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            HT+F++ISKIV R+II+RD NRFHHF  G CSCG YW
Sbjct: 1098 HTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 298/570 (52%), Gaps = 23/570 (4%)

Query: 24  TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
           TGF  D F  N+L+ +Y + GN + +R+LFD +P++++VSW+ L S Y      +EA   
Sbjct: 169 TGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSL 228

Query: 84  FKEMVLSGIRPNEFSLSSMINAC--AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMY 141
           FK ++ SG+ PN F++ S + AC   GS    LG +IH +  KL   SDM  +N L+ MY
Sbjct: 229 FKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMY 288

Query: 142 AKV-GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ--QMKSSEIN--PN 196
           +   G+++DA  VF +I+  + V+WN++I+          A KLF   QM+  E+N  PN
Sbjct: 289 SDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPN 348

Query: 197 MFTYTSALK-ACA----GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            +T  S +  AC+    G+ L E   Q+   + K     D  VG  LV+ +A+ G MD A
Sbjct: 349 EYTLCSLVTAACSLADCGLVLLE---QMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCA 405

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           +MIF  M ++N +  N ++ G  +     EAA +F  M ++ V  +  +L  +L +   F
Sbjct: 406 KMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEF 464

Query: 312 QAIGVCK----QVHALSVKTAF-ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
             +   K    +VHA   ++   ++   I N+L++ YGKC  +++A  +F+   + D V+
Sbjct: 465 SNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS 524

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             SMI+        EEA+  +  M+   + P +F   S L++C++L     G+Q+H    
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGF 584

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH-GRGKEAL 485
           K+G   D    N+L+ +YA+  SI++  + F ++P+   VSW++ IG LA++     +AL
Sbjct: 585 KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQAL 644

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           + F +M++ G  PN +T +++L A +   ++    H   ++  K+ +         ++  
Sbjct: 645 KYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG-HQIHALILKYSVADDNAIENALLAF 703

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALL 575
            G+  + ++   +   M  + +   W +++
Sbjct: 704 YGKCEQMEDCEIIFSRMSERRDEVSWNSMI 733



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 170/599 (28%), Positives = 290/599 (48%), Gaps = 28/599 (4%)

Query: 2   LKACTS--KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-GNFIDSRRLFDAIPE 58
           L+AC       + LG+Q+H  +      SD  ++N L+ MY+ C G+  D+ R+FD I  
Sbjct: 248 LRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKF 307

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI----RPNEFSLSSMINACAGSGDS-- 112
           R+ V+WNS+ S Y        A   F  M + G+    RPNE++L S++ A     D   
Sbjct: 308 RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 367

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           +L  ++     K G+  D++  +ALV+ +A+ G ++ A  +FK +   + V+ N ++ G 
Sbjct: 368 VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGL 427

Query: 173 VLHEHNDWALKLFQQMKS-SEINP-------NMFTYTSALKACAGMELKELGRQLHCSLI 224
                 + A K+F++MK   EIN        + FT  S LK     E K  G+++H  L 
Sbjct: 428 ARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLK-----EGKRKGQEVHAYLF 482

Query: 225 KMEIKSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
           +  +    I +G  LV+MY KC ++D A  +F LMP K+ ++WN +ISG   N    EA 
Sbjct: 483 RSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAV 542

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
           S F  M R G+     ++ + L S +S   + + +Q+H    K   + D  + N+L+  Y
Sbjct: 543 SCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLY 602

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE-EALKLYLEMQDREINPDSFVC 402
            +   + +  K+F +    D V+  S I A A++     +ALK +LEM      P+    
Sbjct: 603 AETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTF 662

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            ++L A ++ S    G Q+H  I+K+    D    N+L+  Y KC  ++D +  FS + +
Sbjct: 663 INILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSE 722

Query: 463 -RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
            R  VSW++MI G    G   +A+ +   M++ G   +  T  +VL AC     + E   
Sbjct: 723 RRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATL-ERGM 781

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
              +   +  ++      + ++D+  + GK   A    + MP + N   W +++ G AR
Sbjct: 782 EVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYAR 839



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 272/542 (50%), Gaps = 33/542 (6%)

Query: 69  SCYVHCDFLEEAVCFFKEMV------LSGIRPNEFS------LSSMINACAGSGDSLLGR 116
           +C   CDF E A   F  ++       + +R   FS      L S  +    S       
Sbjct: 101 TCVAGCDFPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDAN 160

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +H    K G+  D+F  N L+++Y ++GNL  A  +F ++   ++VSW+ +I+G   + 
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDPIV 234
             D A  LF+ + SS + PN F   SAL+AC   G    +LG Q+H  + K+   SD I+
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280

Query: 235 GVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
              L+ MY+ C GS+D+A  +F  +  +N + WN +IS + + G  + A  LF  M  EG
Sbjct: 281 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG 340

Query: 294 VGF----DQTTLSTVLKSVASFQAIGVC--KQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
           V      ++ TL +++ +  S    G+   +Q+     K+ F  D Y+ ++L++ + + G
Sbjct: 341 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EINPDSFVCSSLL 406
            ++ A  IFK+    + V    ++   A+   GEEA K++ EM+D  EIN +S V   LL
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVV--LL 458

Query: 407 NACANLSAYEQGK----QVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIP 461
           +     S  ++GK    +VH ++ + G +    + GN+LVNMY KC +ID+A   F  +P
Sbjct: 459 STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP 518

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
            +  VSW++MI GL  + R +EA+  F  M  +G++P++ +++S L +C+  G +   + 
Sbjct: 519 SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ 578

Query: 522 -HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            H E    K+G+         ++ +        E  ++   MP + +   W + +GA   
Sbjct: 579 IHGEGF--KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGALAK 635

Query: 581 YK 582
           Y+
Sbjct: 636 YE 637



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 228/466 (48%), Gaps = 43/466 (9%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
             L +C+S   L LG Q+HG     G D D  V+N+L+ +YA+  +  + +++F  +PE  
Sbjct: 563  TLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYD 622

Query: 61   VVSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSWNS        +  + +A+ +F EM+ +G RPN  +  +++ A +      LG +IH
Sbjct: 623  QVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIH 682

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGC----VL 174
               +K     D    NAL+  Y K   +ED   +F  + E  D VSWN++I+G     +L
Sbjct: 683  ALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGIL 742

Query: 175  HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
            H+  D    + Q+ +      + FT+ + L ACA +   E G ++H   ++  ++SD +V
Sbjct: 743  HKAMDLVWPMMQRGQ----KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798

Query: 235  GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
            G  LVDMYAKCG +D A   F LMP +N+ +WN +ISG+ ++G   +A  +F  M + G 
Sbjct: 799  GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858

Query: 295  GFDQTTLSTVLKSVA----------SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
              D  T   VL + +           F+++G   +V+ LS +    S       ++D  G
Sbjct: 859  SPDHVTFVGVLSACSHVGLVDEGYKHFKSMG---EVYGLSPRIEHFS------CMVDLLG 909

Query: 345  KCGHV---EDAVKIFKESSAVDLVACTSMITAYAQFG----LGEEALKLYLEMQDREINP 397
            + G V   ED +K       + L+  T +       G    LG+ A K+ +E++ +  N 
Sbjct: 910  RAGDVKKIEDFIKTMPMDPNI-LIWRTVLGACCRANGRNTELGQRAAKMLIELEPQ--NA 966

Query: 398  DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
             ++V  S ++A      +E   +  + + K     D  AG S VNM
Sbjct: 967  VNYVLLSNMHAAGG--NWEDVVEARLAMRKAAVKKD--AGCSWVNM 1008


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/697 (38%), Positives = 415/697 (59%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT  +D  LGLQVH + +  GFDSD     +LV MY+ C     +  +F  +PER+
Sbjct: 176 VLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERN 235

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V W+++ + YV  D   E +  +K M+  G+  ++ + +S   +CAG     LG ++H 
Sbjct: 236 SVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHA 295

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y++K  +  D     A +DMYAK   + DA  VF    +P   S NA+I G    +    
Sbjct: 296 YALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLE 355

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++F+ ++ S ++ +  + + AL AC+ ++    G QLH   +K  +  +  V   ++D
Sbjct: 356 ALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILD 415

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG++ EA +IF  M  K+ ++WN +I+ H QN    E  +LF  M R  +  D  T
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +V+K+ A  +A+    +VH   +K+    D ++ +++ID Y KCG + +A KI +   
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V+  S+I+ ++    GE AL  +  M    + PD+F  +++L+ CANL+  E GKQ
Sbjct: 536 ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQ 595

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I+K    SD +  +++V+MY+KCG++ D+   F + P R  V+WSAMI   A HG 
Sbjct: 596 IHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGL 655

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++A+++F +M    V PNH   +SVL AC H G V +  H+F  M   +G+ P  EHY+
Sbjct: 656 GEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYS 715

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+LGR+G+  EA+EL+++MPF+A+  +W  LLG  R+  NVEV + AA  L  ++P+
Sbjct: 716 CMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQ 775

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS +VLLSN+YA AGMW  VAK+R FMK+ KLKKEPG SWI+V+D+V+ F VGD++H R
Sbjct: 776 DSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPR 835

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           S+EIY +   + D +   GYVP ++  L D E  E++
Sbjct: 836 SEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQD 872



 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 194/652 (29%), Positives = 336/652 (51%), Gaps = 42/652 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           + + C++ K +  G Q H  +  TGF    FV+N L+  Y KC                 
Sbjct: 44  IFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRD 103

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         GN   ++ LFD++PER VVSWNS+ SCY+   F  +++  F +M L
Sbjct: 104 VISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRL 163

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             I+ +  + + ++ AC G  D  LG ++H  +I++G+DSD+ +  ALVDMY+    L+ 
Sbjct: 164 LEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDH 223

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F ++   + V W+AVIAG V ++     LKL++ M    +  +  T+ SA ++CAG
Sbjct: 224 AFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAG 283

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   ELG QLH   +K     D IVG   +DMYAKC  M +AR +F+  P     + N +
Sbjct: 284 LSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNAL 343

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ +    +EA  +F  + +  + FD+ +LS  L + ++ +      Q+H L+VK   
Sbjct: 344 IVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGL 403

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           + +  + N+++D Y KCG + +A  IF +    D V+  ++I A+ Q    EE L L++ 
Sbjct: 404 DFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVS 463

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD +   S++ ACA   A   G +VH  +IK G   D F G+++++MY KCG 
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGM 523

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           + +A++    + +R  VSW+++I G +   +G+ AL  F +ML+ GV+P++ T  +VL  
Sbjct: 524 LVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDI 583

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQAN 567
           C +   V   K     + K   +Q   + Y  + ++D+  + G  Q++  + +  P + +
Sbjct: 584 CANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRD 639

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEML--FAIEPEKSSTHVLLSNIYASAGM 617
              W A++ A   Y    +G+ A ++     ++  K +  + +S + A A M
Sbjct: 640 YVTWSAMICA---YAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHM 688



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 218/446 (48%), Gaps = 31/446 (6%)

Query: 96  EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           + + S +   C+       G++ H      G+   +F +N L+  Y K  NL  A  VF 
Sbjct: 38  KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 156 DIEHPDIVSWNAVIAG------------------------------CVLHE-HNDWALKL 184
            +   D++SWN +I G                              C L    +  ++++
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F +M+  EI  +  T+   LKAC G+E   LG Q+HC  I+M   SD + G  LVDMY+ 
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           C  +D A  IF  MPE+N + W+ VI+G+++N    E   L+  M  EG+G  Q T ++ 
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            +S A   A  +  Q+HA ++KT F  D+ +  + +D Y KC  + DA K+F        
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            +  ++I  YA+     EAL+++  +Q   ++ D    S  L AC+ +  Y +G Q+H  
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
            +K G   +    N++++MYAKCG++ +A   F ++  +  VSW+A+I    Q+   +E 
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCAC 510
           L +F  ML   + P+  T  SV+ AC
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKAC 483



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 195/430 (45%), Gaps = 34/430 (7%)

Query: 188 MKSSEINPNM-FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           + S+++NP    T++   + C+ ++    G+Q H  +          V   L+  Y KC 
Sbjct: 28  ISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCL 87

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISG-------------------------------HLQ 275
           +++ A  +F  MP++++I+WN +I G                               +LQ
Sbjct: 88  NLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQ 147

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG   ++  +F  M    +  D  T + VLK+    +  G+  QVH L+++  F+SD   
Sbjct: 148 NGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVT 207

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             +L+D Y  C  ++ A  IF E    + V  +++I  Y +     E LKLY  M D  +
Sbjct: 208 GTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGM 267

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
                  +S   +CA LSA+E G Q+H + +K  F  D   G + ++MYAKC  + DA +
Sbjct: 268 GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARK 327

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F+  P+    S +A+I G A+  +  EAL++F  + +  +  + I+L   L AC+    
Sbjct: 328 VFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKG 387

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             E       +  K G+         ++D+  + G   EA  + D M  + +A  W A++
Sbjct: 388 YLEGI-QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAII 445

Query: 576 GAARIYKNVE 585
            A    ++VE
Sbjct: 446 AAHEQNEHVE 455


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/708 (37%), Positives = 413/708 (58%), Gaps = 37/708 (5%)

Query: 97  FSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD 156
           + L++++ A A SG     R++  +    G   ++ + N+L+   A+ G + D   +F  
Sbjct: 47  YLLNTLLTAYASSGLLPHARRV--FDAMPG--RNLVTGNSLLSALARAGLVRDMERLFTS 102

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE--INPNMFTYTSALKACAGMELKE 214
           +   D VS+NA++AG      +  A   +  +   E  + P+  T +  +   + +  + 
Sbjct: 103 LPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRA 162

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL----------- 263
           LGRQ+HC ++++   +    G  LVDMYAK G + +AR +F  M  KN+           
Sbjct: 163 LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLL 222

Query: 264 --------------------IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
                               I W  +++G  QNG + EA  +F  M  EGVG DQ T  +
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           +L +  +  A+   KQ+HA   +T +E + ++ ++L+D Y KC  V  A  +F+     +
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           +++ T+MI  Y Q G GEEA++++ EMQ   I PD F   S++++CANL++ E+G Q H 
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
             +  G        N+LV +Y KCGSI+DA R F E+     VSW+A++ G AQ G+ KE
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKE 462

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
            + +F +ML  GV P+ +T + VL AC+ +GLV + + +F SM++   I P+ +HY CMI
Sbjct: 463 TIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMI 522

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+  R+G  ++A E +  MP   +A  W  LL A R+  ++E+G+ AAE L  ++P+  +
Sbjct: 523 DLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPA 582

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
           ++VLL +++AS G W++VAK+RR M+D ++KKEPG SWI+ K+KV+ F+  D+SH  S+ 
Sbjct: 583 SYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRT 642

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           IY KL  ++  + + GY P V + LHDV ++EK  +L HHSEKLA+AFGLI  PP   IR
Sbjct: 643 IYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIR 702

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + KNLR+CVDCH + +FISKI  R+I+VRD  RFH F NG CSCG +W
Sbjct: 703 IVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 246/486 (50%), Gaps = 41/486 (8%)

Query: 14  GLQVHGIVVFTGFDSDEFV-ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           GL  H   VF        V  NSL+   A+ G   D  RLF ++P+R  VS+N+L + + 
Sbjct: 60  GLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFS 119

Query: 73  HCDFLEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
                  A   +  ++   +G+RP+  ++S ++   +  GD  LGR++H   ++LG+ + 
Sbjct: 120 RAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAY 179

Query: 131 MFSANALVDMYAKVGNLEDAV-------------------------------AVFKDIEH 159
            F+ + LVDMYAKVG + DA                                A+F+ IE 
Sbjct: 180 AFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEE 239

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D ++W  ++ G   +     AL +F++M++  +  + +T+ S L AC  +   E G+Q+
Sbjct: 240 RDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI 299

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  + +   + +  VG  LVDMY+KC S+  A  +F  M  KN+I+W  +I G+ QNG  
Sbjct: 300 HAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCG 359

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            EA  +F  M R+G+  D  TL +V+ S A+  ++    Q H L++ +       + N+L
Sbjct: 360 EEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNAL 419

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +  YGKCG +EDA ++F E S  D V+ T+++  YAQFG  +E + L+ +M  + + PD 
Sbjct: 420 VTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDG 479

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGF----MSDTFAGNSLVNMYAKCGSIDDADR 455
                +L+AC+     ++G+  + H ++       + D +    ++++Y++ G +  A+ 
Sbjct: 480 VTFIGVLSACSRSGLVDKGRS-YFHSMQQDHDIVPLDDHY--TCMIDLYSRSGWLKQAEE 536

Query: 456 AFSEIP 461
              ++P
Sbjct: 537 FIKQMP 542



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 250/580 (43%), Gaps = 86/580 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD------ 54
           V+   ++  D  LG QVH  ++  GF +  F  + LV MYAK G   D+RR+FD      
Sbjct: 151 VVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKN 210

Query: 55  -------------------------AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                    AI ER  ++W ++ +         EA+  F+ M  
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+  ++++  S++ AC        G++IH Y  +  Y+ ++F  +ALVDMY+K  ++  
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A AVF+ +   +I+SW A+I G   +   + A+++F +M+   I P+ FT  S + +CA 
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCAN 390

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   E G Q HC  +   ++    V   LV +Y KCGS+++A  +F  M   + ++W  +
Sbjct: 391 LASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 450

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ-VHALSVKTA 328
           + G+ Q G   E   LF  M  +GV  D  T   VL + +    +   +   H++     
Sbjct: 451 VMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSM----- 505

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
               D+ +  L D Y                        T MI  Y++ G  ++A +   
Sbjct: 506 --QQDHDIVPLDDHY------------------------TCMIDLYSRSGWLKQAEEFIK 539

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M      PD+F  ++LL+AC      E GK    +++K     +  +   L +M+A  G
Sbjct: 540 QMPR---CPDAFGWATLLSACRLRGDMEIGKWAAENLLKLD-PQNPASYVLLCSMHASKG 595

Query: 449 SIDDADRAFSEIPDRGI-----VSWSAMIGGL-------AQHGRGK---EALQMF-GQML 492
             +D  +    + DR +      SW      +         H   +   E LQ    +M+
Sbjct: 596 EWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMV 655

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           E+G  P+   + SVL     A  V    HH E +   FG+
Sbjct: 656 EEGYKPD---VSSVLHDVADAEKVHMLSHHSEKLAIAFGL 692



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 65/267 (24%)

Query: 320 VHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           VHAL ++T    S  Y++N+L+ AY   G +  A ++F      +LV   S+++A A+ G
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 379 LGEEALKLYLEMQDRE---------------------------------INPDSFVCSSL 405
           L  +  +L+  +  R+                                 + P     S +
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE------ 459
           +   + L     G+QVH  I++ GF +  F G+ LV+MYAK G I DA R F E      
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211

Query: 460 -------------------------IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
                                    I +R  ++W+ M+ GL Q+G   EAL +F +M  +
Sbjct: 212 VMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAE 271

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKH 521
           GV  +  T  S+L AC     + E K 
Sbjct: 272 GVGIDQYTFGSILTACGALAALEEGKQ 298


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/772 (35%), Positives = 444/772 (57%), Gaps = 5/772 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  K D      +H  ++  G   D F  N L+  Y K G   D+  LFD +PER+
Sbjct: 55  MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+ +L   Y      ++ +  +  +   G   N    +S +        + +   +H 
Sbjct: 115 NVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +KLGYDS+ F   AL++ Y+  G+++ A  VF+ I   DIV W  +++  V + + + 
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +LKL   M+ +   PN +T+ +ALKA  G+   +  + +H  ++K     DP VGVGL+ 
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y + G M +A  +F+ MP+ +++ W+ +I+   QNG   EA  LF  M    V  ++ T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           LS++L   A  +  G+ +Q+H L VK  F+ D Y+ N+LID Y KC  ++ AVK+F E S
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + + V+  ++I  Y   G G +A  ++ E    +++      SS L ACA+L++ + G Q
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   IK          NSL++MYAKCG I  A   F+E+    + SW+A+I G + HG 
Sbjct: 471 VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGL 530

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++AL++   M +    PN +T + VL  C++AGL+ + +  FESM +  GI+P  EHY 
Sbjct: 531 GRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+ +LGR+G+  +AM+L++ +P++ +  +W A+L A+    N E  + +AE +  I P+
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK 650

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
             +T+VL+SN+YA A  W NVA +R+ MK+  +KKEPG+SWIE +  V+ F+VG   H  
Sbjct: 651 DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPD 710

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            K I   L+ ++    +AGYVP     L D+++ EK++ L+ HSE+LA+A+GL+  P   
Sbjct: 711 MKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSR 770

Query: 721 T-IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I + KNLRIC DCH++ + IS IV R++++RD+NRFHHF  G CSCG +W
Sbjct: 771 NRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 248/501 (49%), Gaps = 23/501 (4%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           +M+  C    D +  + IH   +K G   D+F+ N L++ Y K G  +DA+ +F ++   
Sbjct: 54  AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQ 218
           + VS+  +  G    +     + L+ ++  +  E+NP++F  TS LK    ++  E+   
Sbjct: 114 NNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVF--TSFLKLFVSLDKAEICPW 167

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           LH  ++K+   S+  VG  L++ Y+ CGS+D AR +F  +  K+++ W  ++S +++NG 
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             ++  L   M   G   +  T  T LK+     A    K VH   +KT +  D  +   
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y + G + DA K+F E    D+V  + MI  + Q G   EA+ L++ M++  + P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            F  SS+LN CA       G+Q+H  ++K GF  D +  N+L+++YAKC  +D A + F+
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVA 517
           E+  +  VSW+ +I G    G G +A  MF + L + V    +T  S L AC + A +  
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467

Query: 518 EAKHHFESME----KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
             + H  +++    KK  +         +ID+  + G  + A  + + M    + + W A
Sbjct: 468 GVQVHGLAIKTNNAKKVAVS------NSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNA 520

Query: 574 LLGAARIYKNVEVGQHAAEML 594
           L+     Y    +G+ A  +L
Sbjct: 521 LISG---YSTHGLGRQALRIL 538



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 1/102 (0%)

Query: 376 QFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           Q G   +   L LE  D  I   DS    ++L  C   +     K +H  I+K G   D 
Sbjct: 25  QCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           FA N L+N Y K G   DA   F E+P+R  VS+  +  G A
Sbjct: 85  FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/707 (37%), Positives = 415/707 (58%), Gaps = 68/707 (9%)

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           FS N L+  YAK GN E +  +  ++   D VSW A+I G       D A+ +F +M S 
Sbjct: 77  FSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE 136

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + P+ FT ++ L +CA  +  ++GR++H  ++K+ + S   V   L++MYAKCG    A
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIA 196

Query: 252 RMIF-------------------------------HLMPEKNLIAWNIVISGHLQNGGDM 280
           +++F                                 MP++++++WN +ISG+ Q G ++
Sbjct: 197 KVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNL 256

Query: 281 EAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-- 337
           EA ++F  M  E  +  D  TL+++L + A+ + + + KQ+HA  ++   E+   + N  
Sbjct: 257 EALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316

Query: 338 -------------------------------SLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                                          SL+D Y K G+V+ A +IF +    D+VA
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T+MI  Y Q GL  +AL+L+  M +    P+S+  +++L+  ++L+  E GKQ+H   I
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEA 484
           K G  S     N+L+ MYAK G+I+ A R F ++P+  + IVSW++MI  LAQHG GKEA
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEA 495

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           + +F +ML  G+ P+HIT V VL AC H GLV + + ++  M +   I+P   HYACMID
Sbjct: 496 INLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMID 555

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           + GRAG  QEA   +++MP + +   WG+LL + +I+KN ++ + AAE L  I+P  S  
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA 615

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           ++ L+N+Y++ G W+N A+ R+ MKD  ++KE G+SWI +K++V+ F V D  H +  EI
Sbjct: 616 YLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEI 675

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y  + E+ + + K G++P  E+ LHD+EE  KEQ+L +HSEKLA+AFGL+ TP    +R+
Sbjct: 676 YKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRI 735

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH++ +FISK+V REIIVRD  RFHHF++GSCSC  YW
Sbjct: 736 MKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 285/611 (46%), Gaps = 101/611 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+     KD F G  VH  ++  G     ++ N+L+  YAK G+   +  +FD +P +S
Sbjct: 16  ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKS 75

Query: 61  VVSWNSLFSCYVH----------------CD---------------FLEEAVCFFKEMVL 89
             SWN+L S Y                  CD                 + A+  F +M+ 
Sbjct: 76  TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN--- 146
             + P++F++S+++++CA +    +GRKIH + +KLG  S +  A +L++MYAK G+   
Sbjct: 136 ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195

Query: 147 ----------------------------LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
                                        E A + F+ +   DIVSWN++I+G     +N
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255

Query: 179 DWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             AL +F +M     + P+ FT  S L ACA +E   +G+Q+H  +++ E ++   VG  
Sbjct: 256 LEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315

Query: 238 LVDMYAKCGSMDEARM---------------------------------IFHLMPEKNLI 264
           L+ MYAK G ++ AR+                                 IF+ + +++++
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV 375

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           AW  +I G++QNG   +A  LF  M  EG   +  TL+ +L   +S   +   KQ+HA +
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASA 435

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEA 383
           +K    S   + N+LI  Y K G++  A ++F   +   ++V+ TSMI A AQ GLG+EA
Sbjct: 436 IKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEA 495

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVN 442
           + L+  M    + PD      +L+AC ++   EQG++ +  + +   +  T +  + +++
Sbjct: 496 INLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMID 555

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML--EDGVLPN 499
           +Y + G + +A      +P +   ++W +++     H     A     ++L  + G    
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA 615

Query: 500 HITLVSVLCAC 510
           ++ L +V  AC
Sbjct: 616 YLALANVYSAC 626



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 238/546 (43%), Gaps = 119/546 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD------ 54
           VL +C + + L +G ++H  VV  G  S   VA SL+ MYAKCG+ + ++ +FD      
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207

Query: 55  -------------------------AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                                     +P+R +VSWNS+ S Y    +  EA+  F +M+ 
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK----- 143
              ++P+ F+L+S+++ACA      +G++IH Y ++   ++     NAL+ MYAK     
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 144 ----------------------------VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                                       +GN++ A  +F  +   D+V+W A+I G V +
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
              + AL+LF+ M +    PN +T  + L   + + + E G+Q+H S IK    S P V 
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L+ MYAK G+++ A+ +F L   +K +++W  +I    Q+G   EA +LF  M   G+
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL +         C  V                          G VE   K
Sbjct: 508 KPDHITYVGVLSA---------CTHV--------------------------GLVEQGRK 532

Query: 355 IFKESSAVDLVACT-----SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            +   + V  +  T      MI  Y + GL +EA   YL ++   I PD+    SLL +C
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA---YLFIESMPIEPDNIAWGSLLASC 589

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI-- 465
                ++      V   +   +    +G   +L N+Y+ CG  ++A +    + DRG+  
Sbjct: 590 ---KIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRK 646

Query: 466 ---VSW 468
              +SW
Sbjct: 647 EKGISW 652



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 6/147 (4%)

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           +  TF+ N+L++ YAK G+ + + R   E+PD   VSW+A+I G  Q G    A+ MF +
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 491 MLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           M+ + V P+  T+ +VL  CA N    +    H F     K G+         ++++  +
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVV---KLGLGSCVPVATSLLNMYAK 189

Query: 549 AGKFQEAMELVDTMPFQANASVWGALL 575
            G    A  + D M  + N S W AL+
Sbjct: 190 CGDPVIAKVVFDRMTVK-NISTWNALI 215


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/707 (38%), Positives = 413/707 (58%), Gaps = 66/707 (9%)

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +FS N ++  YAK G LE+A  VF+++  PD VSW A+I G       + A+ +F++M S
Sbjct: 79  VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS--- 247
            ++ P  FT T+ L +CA +E   +GR++H  ++K  + S   V   L++MYAK G    
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198

Query: 248 ----------------------------MDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
                                       +D A++ F  M E+++++WN +ISG+ Q+G D
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258

Query: 280 MEAASLFPWMYREGVG-FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            EA  +F  M  +     D+ TL++ L + A+ + + + KQ+HA  ++T F++   + N+
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318

Query: 339 LIDAYGKCGHVEDAVKIFKES---------------------------------SAVDLV 365
           LI  Y K G VE A KI ++S                                    D+V
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           A T+MI  Y Q G  ++A++L+  M      P+++  +++L+  ++L++ + G+Q+H   
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEA 484
            + G  S     N+L+ MYAK GSI+DA   F+ I   R  ++W++MI  LAQHG G+EA
Sbjct: 439 TRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEA 498

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           L +F +MLE+G+ P+HIT V VL AC H GLV + + ++  M+    I P   HYACMID
Sbjct: 499 LTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMID 558

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           + GRAG  QEA   ++ MP + +   WG+LL + +++KNVE+ + AAE L  IEPE S  
Sbjct: 559 LFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGA 618

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           +  L+N+Y++ G W+N A +R+ MKD  +KK+ G SW+++K+KV+ F V D  H +   I
Sbjct: 619 YSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAI 678

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y  + ++   + K G+VP  E+ LHD+EE  KEQ+L HHSEKLA+AFGLI TP   T+R+
Sbjct: 679 YEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRI 738

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH++ +FISK+V REIIVRD  RFHHF+NG CSC  YW
Sbjct: 739 MKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 265/569 (46%), Gaps = 99/569 (17%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           KD F G  +H  ++  G     F+ N+L+  YAK G   D+ R+FD +P +SV SWN + 
Sbjct: 27  KDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIIL 86

Query: 69  SCYVHCDFLEEA-------------------------------VCFFKEMVLSGIRPNEF 97
           S Y     LEEA                               +  F+EMV   + P +F
Sbjct: 87  SGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQF 146

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L++++ +CA      +GRK+H + +K G  S +  AN+L++MYAK G+   A  VF  +
Sbjct: 147 TLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRM 206

Query: 158 E-------------------------------HPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           +                                 D+VSWNA+I+G   H  +  AL +F 
Sbjct: 207 KLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFS 266

Query: 187 QM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           +M   S   P+ FT  SAL ACA +E  +LG+Q+H  +I+ E  +   VG  L+ MY+K 
Sbjct: 267 KMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS 326

Query: 246 GS---------------------------------MDEARMIFHLMPEKNLIAWNIVISG 272
           G                                  ++ AR IF  +  ++++AW  +I G
Sbjct: 327 GGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVG 386

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           ++QNG + +A  LF  M +EG   +  TL+T+L   +S  ++   +Q+HA + ++   S 
Sbjct: 387 YVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASS 446

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             + N+LI  Y K G + DA  +F       D +  TSMI A AQ GLGEEAL L+  M 
Sbjct: 447 VSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERML 506

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSI 450
           +  I PD      +L+AC ++   EQG+  +  +     +  T +  + +++++ + G +
Sbjct: 507 ENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLL 566

Query: 451 DDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            +A      +P +  +++W +++     H
Sbjct: 567 QEAHAFIENMPIEPDVIAWGSLLASCKVH 595



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 153/613 (24%), Positives = 264/613 (43%), Gaps = 121/613 (19%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           VL +C + + L +G +VH  VV  G  S   VANSL+ MYAK G+ + ++ +FD +    
Sbjct: 151 VLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210

Query: 58  ----------------------------ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                       ER VVSWN++ S Y    F  EA+  F +M++
Sbjct: 211 TSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLM 270

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS------------------- 129
            S  +P++F+L+S ++ACA   +  LG++IH + I+  +D+                   
Sbjct: 271 DSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVE 330

Query: 130 --------------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                         D+ +  AL+D Y K+G++  A  +F  +   D+V+W A+I G V +
Sbjct: 331 IAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQN 390

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             N  A++LF+ M      PN +T  + L   + +   + GRQ+H S  +    S   V 
Sbjct: 391 GFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVS 450

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L+ MYAK GS+++AR +F+L+  +++ I W  +I    Q+G   EA +LF  M   G+
Sbjct: 451 NALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGI 510

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL +      +   +  + L                         +++A K
Sbjct: 511 KPDHITYVGVLSACTHVGLVEQGRSYYNL-------------------------MQNAHK 545

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           I    S     AC  MI  + + GL +EA   +  +++  I PD     SLL +C     
Sbjct: 546 IIPTPSH---YAC--MIDLFGRAGLLQEA---HAFIENMPIEPDVIAWGSLLASCKVHKN 597

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWS 469
            E   +V    +      ++ A ++L N+Y+ CG  ++A      + D+G+      SW 
Sbjct: 598 VELA-EVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWV 656

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA----CNHAGLVAEAKHHFES 525
            +          K  + +FG  ++DG+ P    +  ++          G V + +     
Sbjct: 657 QI----------KNKVHIFG--VDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHD 704

Query: 526 MEKKFGIQPMQEH 538
           +E++   Q +  H
Sbjct: 705 LEEELKEQILSHH 717



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 192/418 (45%), Gaps = 104/418 (24%)

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           Q+ +S  +P    YTS L+     +    G+ +H  +IK  +     +   L++ YAK G
Sbjct: 7   QILTSPSDP----YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTG 62

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW--------- 288
            + +A  +F  MP K++ +WNI++SG+ + G   EA  +F          W         
Sbjct: 63  FIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQ 122

Query: 289 ---------MYREGVGFD----QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
                    M+RE V  D    Q TL+ VL S A+ + +G+ ++VH+  VK    S   +
Sbjct: 123 MGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISV 182

Query: 336 VNSLIDAYGKCGH------VEDAVKI-------------------------FKESSAVDL 364
            NSL++ Y K G       V D +K+                         F++    D+
Sbjct: 183 ANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDV 242

Query: 365 VACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           V+  +MI+ Y Q G   EAL ++ +M  D    PD F  +S L+ACANL   + GKQ+H 
Sbjct: 243 VSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHA 302

Query: 424 HIIKFGFMSDTFA--GNSLVNMYAKCGS-------------------------------- 449
           HII+  F  DTF   GN+L++MY+K G                                 
Sbjct: 303 HIIRTEF--DTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLG 360

Query: 450 -IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
            I+ A R F  +  R +V+W+AMI G  Q+G  ++A+++F  M+++G  PN+ TL ++
Sbjct: 361 DINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATM 418



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 33/191 (17%)

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI------------ 465
           GK +H  IIK G     F  N+L+N YAK G I DA R F E+P + +            
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 466 -------------------VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
                              VSW+AMI G  Q G+ + A+ MF +M+ D V P   TL +V
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L +C     +   +    S   K G+         ++++  ++G    A  + D M  ++
Sbjct: 152 LASCAAVECLGIGR-KVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210

Query: 567 NASVWGALLGA 577
            +S W  ++ +
Sbjct: 211 TSS-WNTMISS 220


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/781 (36%), Positives = 432/781 (55%), Gaps = 15/781 (1%)

Query: 3   KACTSKKDLFLGL-----------QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR 51
           +   S ++LFL L           Q H  ++  G  +D      L    +       +  
Sbjct: 4   RGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASL 63

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSG 110
           LF  IP   +  +N L   +   +    AV  +  +  S  + P+ F+ + +I+  +  G
Sbjct: 64  LFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLG 123

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
             LL       SI  G+ SD+F  +A+V  Y K   +  A  VF  +   D V WN +++
Sbjct: 124 LGLLLHAH---SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVS 180

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           G V +   D A+ +F  M    I  +  T  + L   A ++   LG  + C  +K+   S
Sbjct: 181 GLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHS 240

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
              V  GL  +Y+KCG ++ AR++F  + + +L+++N +ISG+  N     +  LF  + 
Sbjct: 241 HAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELL 300

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
             G   + +++  ++     F  + + + +H    K+   S+  +  +L   Y +   +E
Sbjct: 301 VSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIE 360

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A  +F ESS   L +  +MI+ YAQ GL E+A+ L+ EMQ  E+ P+    +S+L+ACA
Sbjct: 361 SARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACA 420

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
            L A   GK VH  I +  F S+ F   +L++MYAKCGSI +A R FS +P++  V+W+A
Sbjct: 421 QLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNA 480

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G   HG G EAL +F +ML   V P  +T +SVL AC+HAGLV E    F SM    
Sbjct: 481 MISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDH 540

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           G +P+ EHYACM+D+LGRAG   +A++ +  MP +    VWGALLGA  I+K+  + + A
Sbjct: 541 GFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLA 600

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           ++ LF ++P+    +VLLSNIY++   +   A VR  +K  KL K PG + IEV + ++ 
Sbjct: 601 SDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHI 660

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           FT GD+SH ++  IYA L++++  + +AG+     T LHDVEE EKE ++  HSEKLA+A
Sbjct: 661 FTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIA 720

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGLI + PG  IR+ KNLR+C+DCH + +FISKI  R I+VRD NRFHHF++G CSCG Y
Sbjct: 721 FGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDY 780

Query: 771 W 771
           W
Sbjct: 781 W 781



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 188/359 (52%), Gaps = 1/359 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL      +DL LG+ +  + +  GF S  +V   L  +Y+KCG    +R LF  I +  
Sbjct: 213 VLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPD 272

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VS+N++ S Y   +  E +V  FKE+++SG + N  S+  +I      G   L R IHG
Sbjct: 273 LVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHG 332

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  K G  S+   + AL  +Y+++  +E A  +F +     + SWNA+I+G   +   + 
Sbjct: 333 FCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEK 392

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQ+M+  E+ PN  T TS L ACA +    LG+ +H  + +   +S+  V   L+D
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALID 452

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ EA+ +F +MPEKN + WN +ISG+  +G   EA +LF  M    V     T
Sbjct: 453 MYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVT 512

Query: 301 LSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +VL + +    +    ++  ++     FE        ++D  G+ G+++ A+   ++
Sbjct: 513 FLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRK 571


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/739 (35%), Positives = 438/739 (59%), Gaps = 11/739 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C S ++   GLQV   V+ +G  +   VANSL+ M+   G   D+ +LFD + E  
Sbjct: 151 VVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHD 210

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ S Y H     +    F +M   G+RP+  +L S+++ CA S     G  IH 
Sbjct: 211 TISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHS 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++   DS +   NALV+MY+  G L DA  +F ++   D++SWN +I+  V + ++  
Sbjct: 271 LCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTD 330

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALK   Q+  +  +PN  T++SAL AC+       G+ +H  ++++ ++ + +VG  L+ 
Sbjct: 331 ALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLIT 390

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH--LQNGGDMEAASLFPWMYREGVGFDQ 298
           MY KC SM++A  +F  MP  +++++N++I G+  L++G   +A  +F WM   G+  + 
Sbjct: 391 MYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDG--TKAMQVFSWMRSAGIKPNY 448

Query: 299 TTLSTVLKSVASFQAI-GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T+  +  S AS   +    + +HA  ++T F SD+Y+ NSLI  Y KCG++E +  IF 
Sbjct: 449 ITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFN 508

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             +  ++V+  ++I A  Q G GEEALKL+++MQ      D    +  L++CA+L++ E+
Sbjct: 509 SITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEE 568

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS---WSAMIGG 474
           G Q+H   +K G  SD++  N+ ++MY KCG +D+       +PD+ I     W+ +I G
Sbjct: 569 GMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM---LQVVPDQAIRPQQCWNTLISG 625

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A++G  KEA + F QM+  G  P+++T V++L AC+HAGLV +   ++ SM   FG+ P
Sbjct: 626 YAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSP 685

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             +H  C++D+LGR G+F EA + ++ MP   N  +W +LL ++R +KN+E+G+  A+ L
Sbjct: 686 GIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKL 745

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             ++P   S +VLLSN+YA+   W +V K+R  MK   + K P  SW+++K++V TF +G
Sbjct: 746 LELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIG 805

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           DR H  +++IYAKLDE+   L + GY+    + LHD +E +KEQ L++HSEKLA+A+GLI
Sbjct: 806 DRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865

Query: 715 ATPPGATIRVKKNLRICVD 733
             P G+T     N    +D
Sbjct: 866 VVPEGSTQGSAVNTSSSID 884



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 287/572 (50%), Gaps = 9/572 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G  +H +    G   + ++  +L+ +Y   G   D++RLF  +PER+VVSW +L      
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
             +LEEA+  +++M   G+  N  + +++++ C    + + G ++    I  G  + +  
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKS 190
           AN+L+ M+  +G + DA  +F  +E  D +SWNA+I+   ++ H     K   +F  M+ 
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMIS---MYSHQGICSKCFLVFSDMRH 239

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             + P+  T  S +  CA  +    G  +H   ++  + S   V   LV+MY+  G + +
Sbjct: 240 HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F  M  ++LI+WN +IS ++QN    +A      ++      +  T S+ L + +S
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 359

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
             A+   K VHA+ ++ + + +  + NSLI  YGKC  +EDA K+F+     D+V+   +
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVL 419

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFG 429
           I  YA    G +A++++  M+   I P+     ++  + A+ +  +  G+ +H +II+ G
Sbjct: 420 IGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTG 479

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F+SD +  NSL+ MYAKCG+++ +   F+ I ++ IVSW+A+I    Q G G+EAL++F 
Sbjct: 480 FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFI 539

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            M   G   + + L   L +C     + E       +  K G+          +D+ G+ 
Sbjct: 540 DMQHAGNKLDRVCLAECLSSCASLASLEEGM-QLHGLGMKSGLDSDSYVVNAAMDMYGKC 598

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           GK  E +++V     +     W  L+     Y
Sbjct: 599 GKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKY 629



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 267/547 (48%), Gaps = 20/547 (3%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS--- 112
           + +R+  +W +  S  V C     A    + M   G+  + F+L+S++ AC   G     
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             G  IH  + + G   +++   AL+ +Y   G + DA  +F ++   ++VSW A++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             + + + AL+ ++QM+   +  N   + + +  C  +E +  G Q+   +I   +++  
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+ M+   G + +A  +F  M E + I+WN +IS +   G   +   +F  M   
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D TTL +++   AS         +H+L ++++ +S   ++N+L++ Y   G + DA
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F   S  DL++  +MI++Y Q     +ALK   ++     +P+    SS L AC++ 
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A   GK VH  +++     +   GNSL+ MY KC S++DA++ F  +P   IVS++ +I
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLI 420

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHFESMEKKFG 531
           GG A    G +A+Q+F  M   G+ PN+IT++++     H    +    H++      + 
Sbjct: 421 GGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI-----HGSFASSNDLHNYGRPLHAYI 475

Query: 532 IQP--MQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           I+   + + Y    +I +  + G  + +  + +++    N   W A++ A     NV++G
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NVQLG 529

Query: 588 QHAAEML 594
            H  E L
Sbjct: 530 -HGEEAL 535


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 407/692 (58%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH   IK G  +  F+ + L++  A    G+L  A+++FK I +P+ V WN +I G  
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
             E    AL+ +  M SS   PN +T+ S  K+C  +     G+Q+H  ++K+ ++ +  
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF 164

Query: 234 VGVGLVDMYAKCGSM-------------------------------DEARMIFHLMPEKN 262
           V   L++MYA+ G +                               DEAR +F  +P ++
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD 224

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA-SFQAIGVCKQVH 321
           +++WN +ISG+ Q+G   EA + F  M R  V  + +T+ +VL + A S  ++ +   V 
Sbjct: 225 VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVR 284

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +        S+  +VN LID Y KCG +E+A  +F++    ++V+   MI  Y      +
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFA-GNS 439
           EAL L+  M    I+P+     S+L ACANL A + GK VH ++ K    M +T A   S
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG +  A R F  +  + + +W+AMI G A HG    AL +F +M  +G +P+
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V VL AC HAGL++  + +F SM + + + P   HY CMID+ GRAG F EA  LV
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             M  + + ++W +LLGA RI++ +E+ +  A+ LF +EPE  S +VLLSNIYA AG W+
Sbjct: 525 KNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWE 584

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +VAK+R  + DN++KK PG S IEV   V+ F VGD+ H +S EIY  LDE+   L KAG
Sbjct: 585 DVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L+D++E  KE +L HHSEKLA+AFGLI+T PG TIR+ KNLR+C +CH++ +
Sbjct: 645 FVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATK 704

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI +REII RD NRFHHF++GSCSC  YW
Sbjct: 705 LISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 232/499 (46%), Gaps = 74/499 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI------------- 47
           + K+CT  +    G QVH  V+  G + + FV  SL+ MYA+ G  +             
Sbjct: 134 IFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRD 193

Query: 48  ------------------DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                             ++R LFD IP R VVSWN++ S Y     +EEA+ FF+EM  
Sbjct: 194 AVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRR 253

Query: 90  SGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           + + PN  ++ S+++ACA SG SL LG  +  +    G  S++   N L+DMY K G+LE
Sbjct: 254 AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLE 313

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F+ I+  ++VSWN +I G         AL LF++M  S I+PN  T+ S L ACA
Sbjct: 314 EASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACA 373

Query: 209 GMELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
            +   +LG+ +H  + K    +K+   +   L+DMYAKCG +  A+ IF  M  K+L  W
Sbjct: 374 NLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATW 433

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +ISG   +G    A  LF  M  EG   D  T   VL +         CK    LS+ 
Sbjct: 434 NAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTA---------CKHAGLLSLG 484

Query: 327 TAFES---DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
             + S    DY V+  +  YG                         MI  + + GL +EA
Sbjct: 485 RRYFSSMIQDYKVSPKLPHYG------------------------CMIDLFGRAGLFDEA 520

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
             L   +++ E+ PD  +  SLL AC      E  + V  H+ +     +  A   L N+
Sbjct: 521 ETL---VKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELE-PENPSAYVLLSNI 576

Query: 444 YAKCGSIDDADRAFSEIPD 462
           YA  G  +D  +  + + D
Sbjct: 577 YAGAGRWEDVAKIRTRLND 595



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 237/506 (46%), Gaps = 44/506 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H  ++ TG  +  F  + L+   A    G+   +  LF  I   + V WN +      
Sbjct: 46  QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            +    A+ ++  M+ SG  PNE++  S+  +C     +  G+++H + +KLG + + F 
Sbjct: 106 SESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFV 165

Query: 134 ANALVDMYAKVGNL------------EDAVA-------------------VFKDIEHPDI 162
             +L++MYA+ G L             DAV+                   +F +I   D+
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV 225

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA--GMELKELGRQLH 220
           VSWNA+I+G       + A+  F++M+ +++ PN+ T  S L ACA  G  L +LG  + 
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSL-QLGNWVR 284

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             +    + S+  +  GL+DMY KCG ++EA  +F  + +KN+++WN++I G+       
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT--AFESDDYIVNS 338
           EA  LF  M +  +  +  T  ++L + A+  A+ + K VHA   K   + ++   +  S
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           LID Y KCG +  A +IF   +   L    +MI+ +A  G  + AL L+  M      PD
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAF 457
                 +L AC +      G++    +I+   +S        +++++ + G  D+A+   
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524

Query: 458 SEI---PDRGIVSWSAMIGGLAQHGR 480
             +   PD  I  W +++G    H R
Sbjct: 525 KNMEMKPDGAI--WCSLLGACRIHRR 548



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 37/308 (12%)

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID--AYGKCGHVEDAVKIFKESS 360
           T+L +  + Q +   KQ+H+  +KT   +  + ++ LI+  A    G +  A+ +FK   
Sbjct: 33  TLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIR 89

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             + V    MI   +       AL+ Y+ M      P+ +   S+  +C  +    +GKQ
Sbjct: 90  NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQ 149

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGS------------------------------- 449
           VH H++K G   + F   SL+NMYA+ G                                
Sbjct: 150 VHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGF 209

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +D+A   F EIP R +VSW+AMI G AQ GR +EA+  F +M    V PN  T++SVL A
Sbjct: 210 LDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSA 269

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C  +G   +  +   S  +  G+         +ID+  + G  +EA  L + +    N  
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ-DKNVV 328

Query: 570 VWGALLGA 577
            W  ++G 
Sbjct: 329 SWNVMIGG 336



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 6/177 (3%)

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC--GSIDDADRAFSEIP 461
           +LL+ C  L      KQ+H  IIK G  +  FA + L+   A    G +  A   F  I 
Sbjct: 33  TLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIR 89

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           +   V W+ MI GL+       AL+ +  M+  G  PN  T  S+  +C       E K 
Sbjct: 90  NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK- 148

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
              +   K G++     +  +I++  + G+   A  + D    +   S    + G A
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYA 205


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/658 (39%), Positives = 388/658 (58%), Gaps = 2/658 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKV--GNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           +++H + +K     D     A+++  A +    ++ A+++F  I+ P+  ++N +I G  
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                D AL LF++M    +  + FT++S LKAC+ M+    G Q+H  ++K   KS+  
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V   L+ MYA CG +  AR +F  MPE++++AWN ++SG+ +NG   E   LF  +    
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           + FD  T+ +VL +      + + + +    V      ++ +  SLID Y KCG V+ A 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K+F E    D+VA ++MI+ YAQ    +EAL L+ EMQ   + P+     S+L +CA L 
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           AYE GK VH +I K         G  L++ YAKCG ID +   F E+  + + +W+A+I 
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           GLA +G GK AL+ F  MLE+ V PN +T + VL AC+HA LV + +H F SM + F I+
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIE 457

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY CM+DILGRAG  +EA + +D MPF  NA VW  LL + R +KN+E+ + + E 
Sbjct: 458 PRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEH 517

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +  +EP  S  ++LLSN YA  G  ++  +VR  +K+ ++KK PG S IE+   V+ F  
Sbjct: 518 ITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFS 577

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
            D  H  SKEI+  LD++   + + GYVP  +    + EE  KE  + HHSEKLA+A+GL
Sbjct: 578 EDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGL 637

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I T P  TIR+ KNLR+C DCH + +FIS++  R IIVRD NRFHHF++G CSC  YW
Sbjct: 638 IRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 225/467 (48%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+  K L  G QVH +++ +GF S+EFV N+L+ MYA CG    +R +FD +PERS
Sbjct: 127 VLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERS 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ S Y      +E V  F++++   I  ++ ++ S++ AC    +  +G  I  
Sbjct: 187 IVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGE 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +  G   +     +L+DMYAK G ++ A  +F +++  D+V+W+A+I+G    +    
Sbjct: 247 YIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKE 306

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M+   + PN  T  S L +CA +   E G+ +H  + K ++K    +G  L+D
Sbjct: 307 ALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLID 366

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG +D +  +F  M  KN+  W  +I G   NG    A   F  M    V  +  T
Sbjct: 367 FYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL + +   A  V +  H  +        D+ +   I+ YG                
Sbjct: 427 FIGVLSACS--HACLVDQGRHLFNSMRR----DFDIEPRIEHYG---------------- 464

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                    M+    + G  EEA   Y  + +    P++ V  +LL +C      E  ++
Sbjct: 465 --------CMVDILGRAGFLEEA---YQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEK 513

Query: 421 VHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
              HI +   +    +G+ ++  N YA  G ++DA R  S I ++ I
Sbjct: 514 SLEHITR---LEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEI 557



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 238/482 (49%), Gaps = 7/482 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-GNFID-SRRLFDAIPE 58
           +L+ C + KDL    QVH  ++ T    D  +  +++   A    + ID +  +F+ I +
Sbjct: 27  ILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK 83

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
               ++N +          + A+  FK+M    ++ ++F+ SS++ AC+       G ++
Sbjct: 84  PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K G+ S+ F  N L+ MYA  G +  A  VF  +    IV+WN++++G   +   
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D  +KLF+++    I  +  T  S L AC  +   E+G  +   ++   ++ +  +   L
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKCG +D AR +F  M +++++AW+ +ISG+ Q     EA +LF  M +  V  ++
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+ +VL S A   A    K VH    K   +    +   LID Y KCG+++ +V++FKE
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 383

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S  ++   T++I   A  G G+ AL+ +  M + ++ P+      +L+AC++    +QG
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           + +   + + F           +V++  + G +++A +    +P     V W  ++    
Sbjct: 444 RHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503

Query: 477 QH 478
            H
Sbjct: 504 AH 505


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/707 (37%), Positives = 414/707 (58%), Gaps = 68/707 (9%)

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           FS N L+  YAK GN E +  +  ++   D VSW A+I G       D A+ +F +M S 
Sbjct: 77  FSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE 136

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + P+ FT ++ L +CA  +  ++GR++H  ++K+ + S   V   L++MYAKCG    A
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIA 196

Query: 252 RMIF-------------------------------HLMPEKNLIAWNIVISGHLQNGGDM 280
           +++F                                 MP++++++WN +ISG+ Q G ++
Sbjct: 197 KVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNL 256

Query: 281 EAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-- 337
           EA  +F  M  E  +  D  TL+++L + A+ + + + KQ+HA  ++   E+   + N  
Sbjct: 257 EALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316

Query: 338 -------------------------------SLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                                          SL+D Y K G+V+ A +IF +    D+VA
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T+MI  Y Q GL  +AL+L+  M +    P+S+  +++L+  ++L+  E GKQ+H   I
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEA 484
           K G  S     N+L+ MYAK G+I+ A R F ++P+  + IVSW++MI  LAQHG GKEA
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEA 495

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           + +F +ML  G+ P+HIT V VL AC H GLV + + ++  M +   I+P   HYACMID
Sbjct: 496 INLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMID 555

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           + GRAG  QEA   +++MP + +   WG+LL + +I+KN ++ + AAE L  I+P  S  
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA 615

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           ++ L+N+Y++ G W+N A+ R+ MKD  ++KE G+SWI +K++V+ F V D  H +  EI
Sbjct: 616 YLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEI 675

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y  + E+ + + K G++P  E+ LHD+EE  KEQ+L +HSEKLA+AFGL+ TP    +R+
Sbjct: 676 YKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRI 735

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH++ +FISK+V REIIVRD  RFHHF++GSCSC  YW
Sbjct: 736 MKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 285/611 (46%), Gaps = 101/611 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+     KD F G  VH  ++  G     ++ N+L+  YAK G+   +  +FD +P +S
Sbjct: 16  ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKS 75

Query: 61  VVSWNSLFSCYVH----------------CD---------------FLEEAVCFFKEMVL 89
             SWN+L S Y                  CD                 + A+  F +M+ 
Sbjct: 76  TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN--- 146
             + P++F++S+++++CA +    +GRKIH + +KLG  S +  A +L++MYAK G+   
Sbjct: 136 ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195

Query: 147 ----------------------------LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
                                        E A + F+ +   DIVSWN++I+G     +N
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255

Query: 179 DWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             AL +F +M     + P+ FT  S L ACA +E   +G+Q+H  +++ E ++   VG  
Sbjct: 256 LEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315

Query: 238 LVDMYAKCGSMDEARM---------------------------------IFHLMPEKNLI 264
           L+ MYAK G ++ AR+                                 IF+ + +++++
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV 375

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           AW  +I G++QNG   +A  LF  M  EG   +  TL+ +L   +S   +   KQ+HA +
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASA 435

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEA 383
           +K    S   + N+LI  Y K G++  A ++F   +   ++V+ TSMI A AQ GLG+EA
Sbjct: 436 IKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEA 495

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVN 442
           + L+  M    + PD      +L+AC ++   EQG++ +  + +   +  T +  + +++
Sbjct: 496 INLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMID 555

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML--EDGVLPN 499
           +Y + G + +A      +P +   ++W +++     H     A     ++L  + G    
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA 615

Query: 500 HITLVSVLCAC 510
           ++ L +V  AC
Sbjct: 616 YLALANVYSAC 626



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 238/546 (43%), Gaps = 119/546 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD------ 54
           VL +C + + L +G ++H  VV  G  S   VA SL+ MYAKCG+ + ++ +FD      
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207

Query: 55  -------------------------AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                                     +P+R +VSWNS+ S Y    +  EA+  F +M+ 
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK----- 143
              ++P+ F+L+S+++ACA      +G++IH Y ++   ++     NAL+ MYAK     
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 144 ----------------------------VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                                       +GN++ A  +F  +   D+V+W A+I G V +
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
              + AL+LF+ M +    PN +T  + L   + + + E G+Q+H S IK    S P V 
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L+ MYAK G+++ A+ +F L   +K +++W  +I    Q+G   EA +LF  M   G+
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL +         C  V                          G VE   K
Sbjct: 508 KPDHITYVGVLSA---------CTHV--------------------------GLVEQGRK 532

Query: 355 IFKESSAVDLVACT-----SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            +   + V  +  T      MI  Y + GL +EA   YL ++   I PD+    SLL +C
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA---YLFIESMPIEPDNIAWGSLLASC 589

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI-- 465
                ++      V   +   +    +G   +L N+Y+ CG  ++A +    + DRG+  
Sbjct: 590 ---KIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRK 646

Query: 466 ---VSW 468
              +SW
Sbjct: 647 EKGISW 652



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 6/147 (4%)

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           +  TF+ N+L++ YAK G+ + + R   E+PD   VSW+A+I G  Q G    A+ MF +
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 491 MLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           M+ + V P+  T+ +VL  CA N    +    H F     K G+         ++++  +
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVV---KLGLGSCVPVATSLLNMYAK 189

Query: 549 AGKFQEAMELVDTMPFQANASVWGALL 575
            G    A  + D M  + N S W AL+
Sbjct: 190 CGDPVIAKVVFDRMTVK-NISTWNALI 215


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/727 (36%), Positives = 435/727 (59%), Gaps = 11/727 (1%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            V+  C S ++   GLQV   V+ +G  +   VANSL+ M+   G   D+ +LFD + E  
Sbjct: 453  VVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHD 512

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +SWN++ S Y H     +    F +M   G+RP+  +L S+++ CA S     G  IH 
Sbjct: 513  TISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHS 572

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              ++   DS +   NALV+MY+  G L DA  +F ++   D++SWN +I+  V + ++  
Sbjct: 573  LCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTD 632

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            ALK   Q+  +  +PN  T++SAL AC+       G+ +H  ++++ ++ + +VG  L+ 
Sbjct: 633  ALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLIT 692

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH--LQNGGDMEAASLFPWMYREGVGFDQ 298
            MY KC SM++A  +F  MP  +++++N++I G+  L++G   +A  +F WM   G+  + 
Sbjct: 693  MYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDG--TKAMQVFSWMRSAGIKPNY 750

Query: 299  TTLSTVLKSVASFQAI-GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T+  +  S AS   +    + +HA  ++T F SD+Y+ NSLI  Y KCG++E +  IF 
Sbjct: 751  ITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFN 810

Query: 358  ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
              +  ++V+  ++I A  Q G GEEALKL+++MQ      D    +  L++CA+L++ E+
Sbjct: 811  SITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEE 870

Query: 418  GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS---WSAMIGG 474
            G Q+H   +K G  SD++  N+ ++MY KCG +D+       +PD+ I     W+ +I G
Sbjct: 871  GMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM---LQVVPDQAIRPQQCWNTLISG 927

Query: 475  LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
             A++G  KEA + F QM+  G  P+++T V++L AC+HAGLV +   ++ SM   FG+ P
Sbjct: 928  YAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSP 987

Query: 535  MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
              +H  C++D+LGR G+F EA + ++ MP   N  +W +LL ++R +KN+E+G+  A+ L
Sbjct: 988  GIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKL 1047

Query: 595  FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
              ++P   S +VLLSN+YA+   W +V K+R  MK   + K P  SW+++K++V TF +G
Sbjct: 1048 LELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIG 1107

Query: 655  DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
            DR H  +++IYAKLDE+   L + GY+    + LHD +E +KEQ L++HSEKLA+A+GLI
Sbjct: 1108 DRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 1167

Query: 715  ATPPGAT 721
              P G+T
Sbjct: 1168 VVPEGST 1174



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/589 (25%), Positives = 285/589 (48%), Gaps = 23/589 (3%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR---RLFDAIPERSVVSWNSLFSCYVH 73
           +HG+ V        F  N+L+  Y +  +   +     LFD + +R+  +W +  S  V 
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS---LLGRKIHGYSIKLGYDSD 130
           C    +A    + M   G+  + F+L+S++ AC   G       G  IH  + + G   +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           ++   AL+ +Y   G + DA  +F ++   ++VSW A++     + + + AL+ ++QM+ 
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             +  N   + + +  C  +E +  G Q+   +I   +++   V   L+ M+   G + +
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F  M E + I+WN +IS +   G   +   +F  M   G+  D TTL +++   AS
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
                    +H+L ++++ +S   ++N+L++ Y   G + DA  +F   S  DL++  +M
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 620

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I++Y Q     +ALK   ++     +P+    SS L AC++  A   GK VH  +++   
Sbjct: 621 ISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSL 680

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             +   GNSL+ MY KC S++DA++ F  +P   IVS++ +IGG A    G +A+Q+F  
Sbjct: 681 QRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSW 740

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHFESMEKKFGIQP--MQEHYAC--MIDI 545
           M   G+ PN+IT++++     H    +    H++      + I+   + + Y    +I +
Sbjct: 741 MRSAGIKPNYITMINI-----HGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITM 795

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             + G  + +  + +++    N   W A++ A     NV++G H  E L
Sbjct: 796 YAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NVQLG-HGEEAL 837



 Score = 42.7 bits (99), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 9/152 (5%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR---RLFDAIPERSVVSWNSLFSCYVH 73
           +HG+ V        F  N+L+  Y +  +   +     LFD + +R+  +W +  S  V 
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS---LLGRKIHGYSIKLGYDSD 130
           C     A    + M   G+  + F+L+S++ AC   G       G  IH  + + G   +
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157

Query: 131 MFSANALVDMYAKVGNLE--DAVAVFKDIEHP 160
           ++   AL+ +  ++   E  DAV++     HP
Sbjct: 158 VYIGRALLHL-PQIRRREALDAVSLSPSSAHP 188


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/586 (43%), Positives = 370/586 (63%), Gaps = 5/586 (0%)

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL- 238
           +AL L Q+     + P+   Y+  LK C  +   E GR +H  L+      + +V   + 
Sbjct: 73  YALDLIQR---GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNII 129

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V+MYAKCG +D+AR +F  MP K+++ W  +I+G  QN    +A  LFP M R G   + 
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNH 189

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TLS++LK+  S   +    Q+HA  +K  ++S  Y+ ++L+D Y +CGH++ A   F  
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                 V+  ++I+ +A+ G GE AL L  +MQ +   P  F  SS+L+ACA++ A EQG
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K VH H+IK G     F GN+L++MYAK GSIDDA R F  +    +VSW+ M+ G AQH
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GKE L  F QML  G+ PN I+ + VL AC+H+GL+ E  ++FE M KK+ ++P   H
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPH 428

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y   +D+LGR G    A   +  MP +  A+VWGALLGA R++KN+E+G +AAE  F ++
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S   +LLSNIYASAG W +VAKVR+ MK++ +KK+P  SW+E+++ V+ F   D +H
Sbjct: 489 PHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETH 548

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            R KEI  K +E+S  + + GYVP     L  V++ E+E+ L +HSEKLA+AF L+ TP 
Sbjct: 549 PRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPT 608

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
           G+ IR+KKN+R+C DCH + +F+SK+V REIIVRD NRFH FR+GS
Sbjct: 609 GSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 201/389 (51%), Gaps = 6/389 (1%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVA 152
           P+    S ++  C   G    GR +H + +   + D+ +   N +V+MYAK G L+DA  
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F ++   D+V+W A+IAG   +     AL LF QM      PN FT +S LKA      
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            + G QLH   +K   +S   VG  LVDMYA+CG MD A++ F  MP K+ ++WN +ISG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           H + G    A  L   M R+       T S+VL + AS  A+   K VHA  +K+  +  
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            +I N+L+D Y K G ++DA ++F      D+V+  +M+T  AQ GLG+E L  + +M  
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 393 REINPD--SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
             I P+  SF+C  +L AC++    ++G      + K+    D     + V++  + G +
Sbjct: 385 IGIEPNEISFLC--VLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442

Query: 451 DDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           D A+R   E+P     + W A++G    H
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 191/359 (53%), Gaps = 1/359 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVV-MYAKCGNFIDSRRLFDAIPER 59
           +LK CT    +  G  VH  +V + F  +  V  +++V MYAKCG   D+RR+FD +P +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            +V+W +L + +   +   +A+  F +M+  G +PN F+LSS++ A         G ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + +K GY S ++  +ALVDMYA+ G+++ A   F  +     VSWNA+I+G       +
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL L  +M+     P  FTY+S L ACA +   E G+ +H  +IK  +K    +G  L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK GS+D+A+ +F  + + ++++WN +++G  Q+G   E    F  M R G+  ++ 
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           +   VL + +    +        L  K   E D     + +D  G+ G ++ A +  +E
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE 451



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  S+  L  G Q+H   +  G+ S  +V ++LV MYA+CG+   ++  FD +P +S
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L S +      E A+    +M     +P  F+ SS+++ACA  G    G+ +H 
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHA 314

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     F  N L+DMYAK G+++DA  VF  +  PD+VSWN ++ GC  H     
Sbjct: 315 HMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKE 374

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L  F+QM    I PN  ++   L AC+   L + G      + K +++ D    V  VD
Sbjct: 375 TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVD 434

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           +  + G +D A      MP E     W  ++
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALL 465


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/579 (42%), Positives = 382/579 (65%), Gaps = 1/579 (0%)

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + P    Y+  L  C  +   + GR +H  +     + D ++   +++MYAKCGS++EA+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP K++++W ++ISG+ Q+G   EA +LFP M   G   ++ TLS++LK+  +  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +    +Q+HA S+K  ++ + ++ +SL+D Y +  H+ +A  IF   +A ++V+  ++I 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            +A+ G GE  ++L+L+M  +   P  F  SS+  ACA+  + EQGK VH H+IK G   
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
             + GN+L++MYAK GSI DA + F  +  + IVSW+++I G AQHG G EALQ+F QML
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           +  V PN IT +SVL AC+H+GL+ E +++FE M KK  I+    H+  ++D+LGRAG+ 
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRL 459

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            EA + ++ MP +  A+VWGALLG+ R++KN+++G +AAE +F ++P  S  HVLLSNIY
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           ASAG   + AKVR+ MK++ +KKEP  SW+E++++V+ F   D SH   +EI    +++S
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 579

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             + + GYVP     L  + + ++E  L +HSEKLA+AF ++ TPPG TIR+KKN+RIC 
Sbjct: 580 GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 639

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH++F+F S+++ REIIVRD NRFHHF +G CSC  YW
Sbjct: 640 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 195/358 (54%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  CT  + L  G  +H  +  + F+ D  + N ++ MYAKCG+  +++ LFD +P + 
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  L S Y       EA+  F +M+  G +PNEF+LSS++ A         GR++H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +S+K GYD ++   ++L+DMYA+  ++ +A  +F  +   ++VSWNA+IAG       + 
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            ++LF QM      P  FTY+S   ACA     E G+ +H  +IK   +    +G  L+D
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+ +A+ +F  + ++++++WN +ISG+ Q+G   EA  LF  M +  V  ++ T
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +VL + +    +   +    L  K   E+      +++D  G+ G + +A K  +E
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 202/388 (52%), Gaps = 1/388 (0%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P     S M+N C        GR IH +     ++ D+   N +++MYAK G+LE+A 
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F  +   D+VSW  +I+G         AL LF +M      PN FT +S LKA     
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
               GRQLH   +K     +  VG  L+DMYA+   M EA++IF+ +  KN+++WN +I+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           GH + G       LF  M R+G      T S+V  + AS  ++   K VHA  +K+  + 
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             YI N+LID Y K G ++DA K+F+     D+V+  S+I+ YAQ GLG EAL+L+ +M 
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             ++ P+     S+L AC++    ++G+     + K    +      ++V++  + G ++
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460

Query: 452 DADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           +A++   E+P +   + W A++G    H
Sbjct: 461 EANKFIEEMPIKPTAAVWGALLGSCRMH 488



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 148/271 (54%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +      G Q+H   +  G+D +  V +SL+ MYA+  +  +++ +F+++  ++
Sbjct: 212 LLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L + +      E  +  F +M+  G  P  F+ SS+  ACA SG    G+ +H 
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHA 331

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     +  N L+DMYAK G+++DA  VF+ +   DIVSWN++I+G   H     
Sbjct: 332 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 391

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF+QM  +++ PN  T+ S L AC+   L + G+     + K +I++     V +VD
Sbjct: 392 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 451

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIA-WNIVI 270
           +  + G ++EA      MP K   A W  ++
Sbjct: 452 LLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 3/197 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  AC S   L  G  VH  V+ +G     ++ N+L+ MYAK G+  D++++F  + ++ 
Sbjct: 313 VFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQD 372

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+ S Y       EA+  F++M+ + ++PNE +  S++ AC+ SG    G+    
Sbjct: 373 IVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE 432

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
              K   ++ +     +VD+  + G L +A    +++   P    W A++  C +H++ D
Sbjct: 433 LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMD 492

Query: 180 WALKLFQQMKSSEINPN 196
             +   +Q+   E++P+
Sbjct: 493 LGVYAAEQI--FELDPH 507


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/781 (34%), Positives = 445/781 (56%), Gaps = 11/781 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE-----FVANSLVVMYAKCGNFIDSRRLFDA 55
           +L AC+  + L  G +VHG+V+      DE      + N ++ MY +CG    +  +FD 
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-L 114
           + +++VV+W SL S +       +A+  F++M+LSG+ P+  + +S++   +G   +L  
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G+++H + ++ GY+ D    N +V+MY K G++E A  VF  I+ P++ SW  +IA    
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
           + H    L+L  +M  + + P+ +T+T+ L AC  +   E  + LH + I    +  D  
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  L+++Y KCG+++EA  +F  +  K++++W+ +I+   Q+G    A  L   M  EG
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  +  T   VL++V S +A    K++HA  V+  +  D  + ++L+  Y   G VE A 
Sbjct: 316 VRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETAR 375

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            IF+ S   D+V+ +SMI  Y+Q      AL L+ EM+   + P+S    S ++ACA + 
Sbjct: 376 SIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVG 435

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A  +G Q+H  +   G   D     +LVN+Y KCG +++A+  F  +  + +++W+++  
Sbjct: 436 ALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAM 495

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
              Q+G G  +L++   M   G+ P+ I  V++L +CN+AG +++  H++  M + FGI 
Sbjct: 496 AYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIA 555

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EH  CM+DILGRAGK + A +L++TM F+++ + W  LL A + + +      AAE 
Sbjct: 556 PAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKAHNDTARAARAAEK 614

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +F +EP+ ++ +VLLS+++ +AG W+   + RR M    +++  G S IE+ D+V+ F  
Sbjct: 615 IFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVA 674

Query: 654 GDR--SHARSKEIYAKLDEVSDLLNKAGYVP-MVETDLHDVEESEKEQLLYHHSEKLAVA 710
                 H    EI+A L+++   +  AGYVP      L DVEE  KE  + +HSE LA+ 
Sbjct: 675 ASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALG 734

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
            G+I+TP G  +R+ KNLR+C DCH + +F+SK+V R I VRD  R HHF NG CSCG Y
Sbjct: 735 LGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDY 794

Query: 771 W 771
           W
Sbjct: 795 W 795



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 6/193 (3%)

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD-----TFAGNSLVNMY 444
           M+ REI  +   C+++L AC++L A  +GK+VH  +++   + D     +   N ++ MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
            +CG  D A   F  + D+ +V+W+++I      G   +A+ +F +ML  GV P+ IT  
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           S+L   +      +      S   + G +  +     ++++ G+ G  ++A  + D++  
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQ- 179

Query: 565 QANASVWGALLGA 577
             N   W  ++ A
Sbjct: 180 DPNVFSWTIIIAA 192


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/773 (37%), Positives = 432/773 (55%), Gaps = 53/773 (6%)

Query: 50  RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
           RRL  +    +V  WN L    VH  FLE+ +  ++ M   G RP+ ++   ++ AC   
Sbjct: 101 RRLHPS--SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEI 158

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP---DIVSWN 166
                G  +H      G++ ++F  N LV MY + G  E+A  VF ++      D+VSWN
Sbjct: 159 PSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWN 218

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           +++A  +    +  A+K+F++M     I P+  +  + L ACA +     G+Q+H   ++
Sbjct: 219 SIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALR 278

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
             +  D  VG  +VDMYAKCG M+EA  +F  M  K++++WN +++G+ Q G   +A  L
Sbjct: 279 SGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGL 338

Query: 286 FPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVCKQV--------------------- 320
           F  +  E +  +  T S V+   A     F+A+ V +Q+                     
Sbjct: 339 FEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCAS 398

Query: 321 ------------HALSVKTAFESDD-----YIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
                       HA+      + +D      ++N+LID Y KC   + A  +F      D
Sbjct: 399 AGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKD 458

Query: 364 --LVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGK 419
             +V  T +I   AQ G   EAL+L+ +M   D  + P++F  S  L ACA L A   G+
Sbjct: 459 RSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGR 518

Query: 420 QVHVHIIKFGFMSDT-FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           Q+H ++++  F S   F  N L++MY+K G +D A   F  +  R  VSW++++ G   H
Sbjct: 519 QIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMH 578

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GRG+EALQ+F +M +  ++P+ +T V VL AC+H+G+V +  ++F  M K FG+ P  EH
Sbjct: 579 GRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEH 638

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YACM+D+L RAG+  EAMEL+  MP +   +VW ALL A R+Y NVE+G++AA  L  +E
Sbjct: 639 YACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELE 698

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
                ++ LLSNIYA+A  W +VA++R  MK+  +KK PG SW++ +    TF  GD SH
Sbjct: 699 SGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSH 758

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             S++IY  L ++   +   GYVP     LHDV++ EK  LL  HSEKLA+A+G++ T P
Sbjct: 759 PMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAP 818

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GA IR+ KNLR C DCH++F +IS I+  EIIVRD +RFHHF+NGSCSC GYW
Sbjct: 819 GAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/525 (32%), Positives = 267/525 (50%), Gaps = 53/525 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC        G  VH +V  +GF+ + FV N LV MY +CG + ++R++FD + ER 
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 210

Query: 61  V---VSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGR 116
           V   VSWNS+ + Y+       A+  F+ M    GIRP+  SL +++ ACA  G    G+
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++HGY+++ G   D+F  NA+VDMYAK G +E+A  VF+ ++  D+VSWNA++ G     
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330

Query: 177 HNDWALKLFQQMKSSEI-----------------------------------NPNMFTYT 201
             D AL LF++++  +I                                    PN+ T  
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390

Query: 202 SALKACAGMELKELGRQLHCSLIKMEI---KSDP----IVGVGLVDMYAKCGSMDEARMI 254
           S L  CA       G++ HC  IK  +   ++DP    +V   L+DMY+KC S   AR +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450

Query: 255 FHLMPEKN--LIAWNIVISGHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVAS 310
           F L+P K+  ++ W ++I G+ Q+G   EA  LF  M +    V  +  T+S  L + A 
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510

Query: 311 FQAIGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
             A+   +Q+HA  ++  FES   ++ N LID Y K G V+ A  +F      + V+ TS
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-F 428
           ++T Y   G GEEAL+++ EMQ   + PD      +L AC++    +QG      + K F
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMI 472
           G +        +V++ ++ G +D+A      +P +   + W A++
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALL 675



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 215/448 (47%), Gaps = 62/448 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC S      G QVHG  + +G   D FV N++V MYAKCG   ++ ++F+ +  + 
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 315

Query: 61  VVSWNSLFSCYVHCDFLE-----------------------------------EAVCFFK 85
           VVSWN++ + Y      +                                   EA+  F+
Sbjct: 316 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 375

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDS-----DMFSANALV 138
           +M+L G  PN  +L S+++ CA +G  L G++ H ++IK  L  D      D+   NAL+
Sbjct: 376 QMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 435

Query: 139 DMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSE--IN 194
           DMY+K  + + A A+F  I   D  +V+W  +I G   H   + AL+LF QM   +  + 
Sbjct: 436 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 495

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGVGLVDMYAKCGSMDEARM 253
           PN FT + AL ACA +     GRQ+H  +++   +S  + V   L+DMY+K G +D AR+
Sbjct: 496 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARV 555

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M ++N ++W  +++G+  +G   EA  +F  M +  +  D  T   VL + +    
Sbjct: 556 VFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSH--- 612

Query: 314 IGVCKQVHALSVKTAFESDDYIVNS------LIDAYGKCGHVEDAVKIFK----ESSAVD 363
            G+  Q   ++       D  +V        ++D   + G +++A+++ +    + +   
Sbjct: 613 SGMVDQ--GINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAV 670

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQ 391
            VA  S    YA   LGE A    LE++
Sbjct: 671 WVALLSACRVYANVELGEYAANQLLELE 698



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 190/406 (46%), Gaps = 51/406 (12%)

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH-LMPEKNLI-AWNIVISGHLQNG 277
           H  L+   +  DP     ++ MY    S  +A  +   L P  + +  WN +I   +  G
Sbjct: 68  HQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLG 124

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              +   L+  M R G   D  T   VLK+     +      VHA+   + FE + ++ N
Sbjct: 125 FLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 184

Query: 338 SLIDAYGKCGHVEDAVKIF---KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDR 393
            L+  YG+CG  E+A ++F   +E    DLV+  S++ AY Q G    A+K++  M +D 
Sbjct: 185 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 244

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I PD+    ++L ACA++ A+ +GKQVH + ++ G   D F GN++V+MYAKCG +++A
Sbjct: 245 GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEA 304

Query: 454 DRAFSEIPDRGIVSWSAM-----------------------------------IGGLAQH 478
           ++ F  +  + +VSW+AM                                   I G AQ 
Sbjct: 305 NKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQR 364

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGI---QP 534
           G G EAL +F QML  G  PN +TLVS+L  C  AG +   K  H  +++    +    P
Sbjct: 365 GLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDP 424

Query: 535 MQEHYA--CMIDILGRAGKFQEAMELVDTMPFQANASV-WGALLGA 577
             +      +ID+  +    + A  + D +P +  + V W  L+G 
Sbjct: 425 GDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 470



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 8/213 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDE-FVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L AC     L  G Q+H  V+   F+S   FVAN L+ MY+K G+   +R +FD + +R+
Sbjct: 505 LMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 564

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
            VSW SL + Y      EEA+  F EM    + P+  +   ++ AC+ SG    G    +
Sbjct: 565 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFN 624

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH--- 175
           G +   G          +VD+ ++ G L++A+ + + +   P    W A+++ C ++   
Sbjct: 625 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANV 684

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           E  ++A     +++S   N   +T  S + A A
Sbjct: 685 ELGEYAANQLLELESG--NDGSYTLLSNIYANA 715


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/720 (36%), Positives = 422/720 (58%), Gaps = 1/720 (0%)

Query: 53  FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
           FD +     + WN L +          ++  FK+M+ SG+  + ++ S +  + +     
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             G ++HG+ +K G+       N+LV  Y K   ++ A  VF ++   D++SWN++I G 
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           V +   +  L +F QM  S I  ++ T  S    CA   L  LGR +H   +K     + 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                L+DMY+KCG +D A+ +F  M +++++++  +I+G+ + G   EA  LF  M  E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  T++ VL   A ++ +   K+VH    +     D ++ N+L+D Y KCG +++A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDSFVCSSLLNACAN 411
             +F E    D+++  ++I  Y++     EAL L+ L ++++  +PD    + +L ACA+
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           LSA+++G+++H +I++ G+ SD    NSLV+MYAKCG++  A   F +I  + +VSW+ M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G   HG GKEA+ +F QM + G+  + I+ VS+L AC+H+GLV E    F  M  +  
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I+P  EHYAC++D+L R G   +A   ++ MP   +A++WGALL   RI+ +V++ +  A
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 540

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           E +F +EPE +  +VL++NIYA A  W+ V ++R+ +    L+K PG SWIE+K +V  F
Sbjct: 541 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 600

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
             GD S+  ++ I A L +V   + + GY P+ +  L D EE EKE+ L  HSEKLA+A 
Sbjct: 601 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMAL 660

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G+I++  G  IRV KNLR+C DCH   +F+SK+  REI++RD NRFH F++G CSC G+W
Sbjct: 661 GIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 180/560 (32%), Positives = 299/560 (53%), Gaps = 17/560 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V K+ +S + +  G Q+HG ++ +GF     V NSLV  Y K      +R++FD + ER 
Sbjct: 50  VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 109

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SWNS+ + YV     E+ +  F +M++SGI  +  ++ S+   CA S    LGR +H 
Sbjct: 110 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 169

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K  +  +    N L+DMY+K G+L+ A AVF+++    +VS+ ++IAG         
Sbjct: 170 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 229

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KLF++M+   I+P+++T T+ L  CA   L + G+++H  + + ++  D  V   L+D
Sbjct: 230 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 289

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MYAKCGSM EA ++F  M  K++I+WN +I G+ +N    EA SLF  +  E     D+ 
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 349

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++ VL + AS  A    +++H   ++  + SD ++ NSL+D Y KCG +  A  +F + 
Sbjct: 350 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 409

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           ++ DLV+ T MI  Y   G G+EA+ L+ +M+   I  D     SLL AC++    ++G 
Sbjct: 410 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 469

Query: 420 Q---VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIG 473
           +   +  H  K     + +A   +V+M A+ G +  A R    +   PD  I  W A++ 
Sbjct: 470 RFFNIMRHECKIEPTVEHYA--CIVDMLARTGDLIKAYRFIENMPIPPDATI--WGALLC 525

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G   H   K A ++  ++ E   L    T   VL A  +A   AE     + + K+ G +
Sbjct: 526 GCRIHHDVKLAEKVAEKVFE---LEPENTGYYVLMANIYAE--AEKWEQVKRLRKRIGQR 580

Query: 534 PMQEHYAC-MIDILGRAGKF 552
            ++++  C  I+I GR   F
Sbjct: 581 GLRKNPGCSWIEIKGRVNIF 600


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 265/725 (36%), Positives = 435/725 (60%), Gaps = 7/725 (0%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N+++  Y K G+   +R LFDA+P+R+VV+W  L   Y   +  +EA   F++M  S  
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA--NALVDMYAKVGNLEDA 150
            P+  + ++++  C  +       ++H +++KLG+D+++F    N L+  Y +V  L+ A
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +F++I   D V++N +I G         A+ LF +M+ S   P+ FT++  LKA  G+
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               LG+QLH   +      D  VG  ++  Y+K   + E R +F+ MPE + +++N+VI
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVI 317

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVKTA 328
           S + Q     E+ +LF  M  + +GFD+     +T+L   A+  ++ V +QVH  ++   
Sbjct: 318 SSYSQAEQYEESLNLFREM--QCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVAT 375

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            +S  ++ NSL+D Y KC   ++A  IFK  S    V+ T++I+ Y Q GL    LKL+ 
Sbjct: 376 ADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFT 435

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M+   +  D    +++L A A  ++   GKQ+H  II+ G + + F+G+ LV+MYAKCG
Sbjct: 436 KMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 495

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           SI DA + F E+PDR  VSW+A+I   A +G G+ A+  F +M++ G+ P+ ++++ VL 
Sbjct: 496 SIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLI 555

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H G V +    F++M   +GI P ++HYACM+D+LGR G+F EA +L+D MPF+ + 
Sbjct: 556 ACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 615

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVRRF 627
            +W ++L A RIYKN  + + AAE LF++E  + ++ +V +SNIYA+AG W+NV  V++ 
Sbjct: 616 IMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKA 675

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           M++  +KK P  SW+EV  K++ F+  D++H    EI  K++E++  + + GY P   + 
Sbjct: 676 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSV 735

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           + D++E  K + L +HSE+LAVAF LI+TP G  I V KNLR C DCH + + ISKIV R
Sbjct: 736 VQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKR 795

Query: 748 EIIVR 752
            I  +
Sbjct: 796 VITTQ 800



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 266/552 (48%), Gaps = 42/552 (7%)

Query: 16  QVHGIVVFTGFDSDEF--VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           QVH   V  GFD++ F  V N L+  Y +      +  LF+ I ++  V++N+L + Y  
Sbjct: 162 QVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEK 221

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                EA+  F +M  SG +P++F+ S ++ A  G  D  LG+++HG S+  G+  D   
Sbjct: 222 DGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASV 281

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            N ++  Y+K   + +   +F ++   D VS+N VI+     E  + +L LF++M+    
Sbjct: 282 GNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGF 341

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           +   F + + L   A +   ++GRQ+HC  I     S   VG  LVDMYAKC   DEA +
Sbjct: 342 DRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAEL 401

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           IF  + +++ ++W  +ISG++Q G       LF  M    +  DQ+T +TVLK+ A F +
Sbjct: 402 IFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFAS 461

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + KQ+HA  +++    + +  + L+D Y KCG ++DAV++F+E    + V+  ++I+A
Sbjct: 462 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 521

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           YA  G GE A+  + +M    + PDS     +L AC++    EQG +       F  MS 
Sbjct: 522 YADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEF------FQAMSP 575

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +        YA                         M+  L ++GR  EA ++  +M  
Sbjct: 576 IYGITPKKKHYA------------------------CMLDLLGRNGRFAEAEKLMDEMPF 611

Query: 494 DGVLPNHITLVSVLCACN---HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           +   P+ I   SVL AC    +  L   A     SMEK          Y  M +I   AG
Sbjct: 612 E---PDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAA----YVSMSNIYAAAG 664

Query: 551 KFQEAMELVDTM 562
           K++    +   M
Sbjct: 665 KWENVRHVKKAM 676



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 220/472 (46%), Gaps = 47/472 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKA     D  LG Q+HG+ V TGF  D  V N ++  Y+K    +++R LF+ +PE  
Sbjct: 250 VLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+N + S Y   +  EE++  F+EM   G     F  ++M++  A      +GR++H 
Sbjct: 310 FVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHC 369

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +I    DS +   N+LVDMYAK    ++A  +FK +     VSW A+I+G V    +  
Sbjct: 370 QAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGA 429

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKLF +M+ + +  +  T+ + LKA AG     LG+QLH  +I+     +   G GLVD
Sbjct: 430 GLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 489

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A  +F  MP++N ++WN +IS +  NG    A   F  M + G+  D  +
Sbjct: 490 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVS 549

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +  VL + +                                    CG VE   + F+  S
Sbjct: 550 ILGVLIACS-----------------------------------HCGFVEQGTEFFQAMS 574

Query: 361 AVDLV-------ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +  +       AC  M+    + G   EA KL  EM      PD  + SS+LNAC    
Sbjct: 575 PIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNACRIYK 629

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
                ++    +     + D  A  S+ N+YA  G  ++       + +RGI
Sbjct: 630 NQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGI 681



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 228/458 (49%), Gaps = 20/458 (4%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           +  S N ++  Y K+G+L  A  +F  +    +V+W  ++     + H D A KLF+QM 
Sbjct: 74  NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--LVDMYAKCGS 247
            S   P+  T+T+ L  C     +    Q+H   +K+   ++  + V   L+  Y +   
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +D A ++F  + +K+ + +N +I+G+ ++G   EA  LF  M + G      T S VLK+
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
           V       + +Q+H LSV T F  D  + N ++  Y K   V +   +F E   +D V+ 
Sbjct: 254 VVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSY 313

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
             +I++Y+Q    EE+L L+ EMQ    +  +F  +++L+  ANLS+ + G+QVH   I 
Sbjct: 314 NVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIV 373

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
               S    GNSLV+MYAKC   D+A+  F  +  R  VSW+A+I G  Q G     L++
Sbjct: 374 ATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKL 433

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAG----LVAEAKHHF----ESMEKKFGIQPMQEHY 539
           F +M    +  +  T  +VL A   AG    L+ +  H F     ++E  F         
Sbjct: 434 FTKMRGANLRADQSTFATVLKAS--AGFASLLLGKQLHAFIIRSGNLENVFS-------G 484

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           + ++D+  + G  ++A+++ + MP   NA  W AL+ A
Sbjct: 485 SGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 521



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 31/126 (24%)

Query: 419 KQVHVHIIKFGFMSD-------------------------------TFAGNSLVNMYAKC 447
           ++V   IIK GF +D                               T + N++++ Y K 
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G +  A   F  +PDR +V+W+ ++G  A +    EA ++F QM     LP+++T  ++L
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 508 CACNHA 513
             CN A
Sbjct: 149 PGCNDA 154


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/619 (41%), Positives = 377/619 (60%)

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  I+ P+I  WN +I G V ++  D A++ +  M+S    PN FT+   LKACA +  
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            +LG ++H  ++K     D  V   LV +YAKCG +++A  +F  +P+KN+++W  +ISG
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           ++  G   EA  +F  +    +  D  T+  VL +      +   + +H   ++     +
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++  SL+D Y KCG++E A  +F      D+V+  +MI  YA  GL +EA+ L+L+MQ 
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             + PD +    +L+ACA L A E G+ V   + +  F+ +   G +L+++YAKCGS+  
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A   F  + ++  V W+A+I GLA +G  K +  +FGQ+ + G+ P+  T + +LC C H
Sbjct: 368 AWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTH 427

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           AGLV E + +F SM + F + P  EHY CM+D+LGRAG   EA +L+  MP +ANA VWG
Sbjct: 428 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWG 487

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           ALLGA RI+++ ++ + A + L  +EP  S  +VLLSNIY++   WD  AKVR  M + +
Sbjct: 488 ALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKR 547

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           ++K PG SWIEV   V+ F VGD+ H  S++IYAKLDE++  +  AGYVP  +  L D+E
Sbjct: 548 IQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIE 607

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           E EKE  L  HSEKLA+AFGLI+  P A IRV KNLR+C DCH + + IS I  REI VR
Sbjct: 608 EEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVR 667

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D NRFH FR GSCSC  YW
Sbjct: 668 DNNRFHCFREGSCSCNDYW 686



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 239/466 (51%), Gaps = 6/466 (1%)

Query: 34  NSLVVMYAKCG-NFIDS---RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           N L+ M  +C  +F D+   R LF  I + ++  WN++    V  D  ++A+ F+  M  
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  PN F+   ++ ACA   D  LG KIH   +K G+D D+F   +LV +YAK G LED
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF DI   ++VSW A+I+G +       A+ +F+++    + P+ FT    L AC  
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +     G  +H  +++M +  +  VG  LVDMYAKCG+M++AR +F  MPEK++++W  +
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+  NG   EA  LF  M RE V  D  T+  VL + A   A+ + + V  L  +  F
Sbjct: 286 IQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +  +  +LID Y KCG +  A ++FK     D V   ++I+  A  G  + +  L+ +
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCG 448
           ++   I PD      LL  C +    ++G++    + +F  ++ +      +V++  + G
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465

Query: 449 SIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +D+A +    +P +   + W A++G    H   + A     Q++E
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/409 (33%), Positives = 213/409 (52%), Gaps = 33/409 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC    DL LG+++H +VV  GFD D FV  SLV +YAKCG   D+ ++FD IP+++
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y+      EA+  F+ ++   + P+ F++  +++AC   GD   G  IH 
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHK 237

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +++G   ++F   +LVDMYAK GN+E A +VF  +   DIVSW A+I G  L+     
Sbjct: 238 CIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKE 297

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF QM+   + P+ +T    L ACA +   ELG  +   + + E   +P++G  L+D
Sbjct: 298 AIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALID 357

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCGSM  A  +F  M EK+ + WN +ISG   NG    +  LF  + + G+  D  T
Sbjct: 358 LYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNT 417

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L           C   HA                L+D   +  +     + F  + 
Sbjct: 418 FIGLL-----------CGCTHA---------------GLVDEGRR--YFNSMYRFFSLTP 449

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           +++   C  M+    + GL +EA +L   +++  +  ++ V  +LL AC
Sbjct: 450 SIEHYGC--MVDLLGRAGLLDEAHQL---IRNMPMEANAIVWGALLGAC 493



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 18/182 (9%)

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADR-----AFSEIPDRGIVSWSAMIGGLAQHG 479
           +++FG   D    N L+NM  +C S D +D       F +I    I  W+ MI GL  + 
Sbjct: 37  LLRFGLCHD----NYLLNMILRC-SFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSND 91

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVAEAKHHFESMEKKFGIQPMQEH 538
              +A++ +G M  +G LPN+ T   VL AC     L    K H   ++  F      + 
Sbjct: 92  CFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVK- 150

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL----LGAARIYKNVEVGQHAAEML 594
              ++ +  + G  ++A ++ D +P   N   W A+    +G  +  + +++ +   EM 
Sbjct: 151 -TSLVCLYAKCGYLEDAHKVFDDIP-DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMN 208

Query: 595 FA 596
            A
Sbjct: 209 LA 210


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 263/667 (39%), Positives = 411/667 (61%), Gaps = 3/667 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +HG ++ +G  SD F+AN L+ + +K     ++R +FD +P +++++W+S+ S Y    +
Sbjct: 71  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130

Query: 77  LEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            EEA+  F ++   SG  PNEF L+S+I AC   G    G ++HG+ ++ G+D D++   
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+D Y+K GN+E+A  VF  +     V+W  +IAG      +  +L+LF QM+ + + P
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + +  +S L AC+ +E  E G+Q+H  +++   + D  V   L+D Y KC  +   R +F
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  KN+I+W  +ISG++QN  D EA  LF  M R G   D    ++VL S  S +A+ 
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             +QVHA ++K   ESD+++ N LID Y K   + DA K+F   +  ++++  +MI  Y+
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
                 EAL+L+ EM+ R   P+ F  ++L+ A +NL++   G+Q H  ++K G     F
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPF 490

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             N+LV+MYAKCGSI++A + F+    R +V W++MI   AQHG  +EAL MF +M+++G
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG 550

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           + PN++T V+VL AC+HAG V +  +HF SM   FGI+P  EHYAC++ +LGR+GK  EA
Sbjct: 551 IQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEA 609

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            E ++ MP +  A VW +LL A RI  NVE+G++AAEM  + +P+ S +++LLSNI+AS 
Sbjct: 610 KEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASK 669

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           GMW +V KVR  M  +++ KEPG SWIEV +KV  F   D +H R  +I + LD +   +
Sbjct: 670 GMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH-READIGSVLDILIQHI 728

Query: 676 NKAGYVP 682
             AGYVP
Sbjct: 729 KGAGYVP 735



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 266/508 (52%), Gaps = 19/508 (3%)

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
           FS  V   FL +  C    + +  +RP     ++++         +  + IHG  I  G 
Sbjct: 25  FSTSVSPQFLLQNPC----LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGL 80

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF-- 185
            SD F AN L+++ +K   +++A  VF  + H ++++W+++++      +++ AL +F  
Sbjct: 81  QSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVD 140

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            Q KS E +PN F   S ++AC  + + E G QLH  +++     D  VG  L+D Y+K 
Sbjct: 141 LQRKSGE-HPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKN 199

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G+++EAR++F  + EK  + W  +I+G+ + G    +  LF  M    V  D+  +S+VL
Sbjct: 200 GNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVL 259

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            + +  + +   KQ+HA  ++   E D  +VN LID Y KC  V+   K+F +    +++
Sbjct: 260 SACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNII 319

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           + T+MI+ Y Q     EA+KL+ EM      PD F C+S+L +C +  A EQG+QVH + 
Sbjct: 320 SWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYT 379

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK    SD F  N L++MYAK   + DA + F  + ++ ++S++AMI G +   +  EAL
Sbjct: 380 IKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEAL 439

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQEHYACMI 543
           ++F +M      PN  T  +++ A ++   +A  +H   F +   K G+         ++
Sbjct: 440 ELFHEMRVRLQKPNEFTFAALITAASN---LASLRHGQQFHNQLVKMGLDFCPFVTNALV 496

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVW 571
           D+  + G  +EA ++        N+S+W
Sbjct: 497 DMYAKCGSIEEARKMF-------NSSIW 517



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 259/492 (52%), Gaps = 6/492 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ACT    +  G Q+HG VV +GFD D +V  SL+  Y+K GN  ++R +FD + E++
Sbjct: 157 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT 216

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ + Y  C     ++  F +M  + + P+ + +SS+++AC+       G++IH 
Sbjct: 217 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 276

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G + D+   N L+D Y K   ++    +F  +   +I+SW  +I+G  +    DW
Sbjct: 277 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG-YMQNSFDW 335

Query: 181 -ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+KLF +M      P+ F  TS L +C   E  E GRQ+H   IK  ++SD  V  GL+
Sbjct: 336 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 395

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK   + +A+ +F +M E+N+I++N +I G+       EA  LF  M       ++ 
Sbjct: 396 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEF 455

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T + ++ + ++  ++   +Q H   VK   +   ++ N+L+D Y KCG +E+A K+F  S
Sbjct: 456 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 515

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V   SMI+ +AQ G  EEAL ++ EM    I P+     ++L+AC++    E G 
Sbjct: 516 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGL 575

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                +  FG    T     +V++  + G + +A     ++P +   + W +++      
Sbjct: 576 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIA 635

Query: 479 GR---GKEALQM 487
           G    GK A +M
Sbjct: 636 GNVELGKYAAEM 647



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +Q   + P     ++LL    + +     K +H  II  G  SDTF  N L+N+ +K   
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLC 508
           +D+A   F ++P + +++WS+M+   +Q G  +EAL +F  +  + G  PN   L SV+ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 509 ACNHAGLVAE-AKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQ 565
           AC   G+V + A+ H   +   F     Q+ Y    +ID   + G  +EA  + D +  +
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFD----QDVYVGTSLIDFYSKNGNIEEARLVFDQLS-E 214

Query: 566 ANASVWGALLGA 577
             A  W  ++  
Sbjct: 215 KTAVTWTTIIAG 226


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/710 (36%), Positives = 410/710 (57%), Gaps = 36/710 (5%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  F L+ ++ A A SG     R++         D ++F+ NAL+   A    + D   +
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMERL 101

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMEL 212
           F  +   D VS+NA+I G         +++L++ +   E + P   T ++ +   + +  
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH---------------- 256
           + LG  +HC ++++   +   VG  LVDMYAK G + +AR +F                 
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 257 ---------------LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
                          LM +++ I W  +++G  QNG  +EA  +F  M  EGVG DQ T 
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L +  +  A    KQ+HA   +T +E + ++ ++L+D Y KC  +  A  +F+  + 
Sbjct: 282 GSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++++ T+MI  Y Q    EEA++ + EMQ   I PD F   S++++CANL++ E+G Q 
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQF 401

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +  G M      N+LV +Y KCGSI+DA R F E+     VSW+A++ G AQ G+ 
Sbjct: 402 HCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KE + +F +ML +G+ P+ +T + VL AC+ AGLV +   +F+SM+K   I P+ +HY C
Sbjct: 462 KETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTC 521

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+  R+G+F+EA E +  MP   +A  W  LL + R+  N+E+G+ AAE L   +P+ 
Sbjct: 522 MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQN 581

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            +++VLL +++A+ G W  VA +RR M+D ++KKEPG SWI+ K+KV+ F+  D+SH  S
Sbjct: 582 PASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFS 641

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
             IY KL+ ++  + + GY P V + LHDV +++K  ++ HHSEKLA+AFGLI  P    
Sbjct: 642 SRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMP 701

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KNLR+CVDCH + +FISKI  R+I+VRD  RFH F +G+CSCG +W
Sbjct: 702 IRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 234/470 (49%), Gaps = 37/470 (7%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D + F  N+L+   A      D  RLF ++PER  VS+N+L + +        +V  ++ 
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 87  MVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           ++    +RP   +LS+MI   +   D  LG  +H   ++LG+ +  F  + LVDMYAK+G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAG---CVLHEHND-------------W--------- 180
            + DA  VF+++E   +V +N +I G   C + E                W         
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 181 ------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 AL +F++M++  +  + +T+ S L AC  +   E G+Q+H  + +   + +  V
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFV 315

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVDMY+KC S+  A  +F  M  +N+I+W  +I G+ QN    EA   F  M  +G+
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL +V+ S A+  ++    Q H L++ +       + N+L+  YGKCG +EDA +
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E S  D V+ T+++T YAQFG  +E + L+ +M    + PD      +L+AC+    
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGL 495

Query: 415 YEQGKQVHVHIIK---FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            E+G      + K      + D +    ++++Y++ G   +A+    ++P
Sbjct: 496 VEKGCDYFDSMQKDHDIVPIDDHY--TCMIDLYSRSGRFKEAEEFIKQMP 543



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 201/428 (46%), Gaps = 38/428 (8%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           D  LG  VH  V+  GF +  FV + LV MYAK G   D+RR+F  +  ++VV +N+L +
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 70  CYVHCDFLE-------------------------------EAVCFFKEMVLSGIRPNEFS 98
             + C  +E                               EA+  F+ M   G+  ++++
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
             S++ AC     S  G++IH Y  +  Y+ ++F  +ALVDMY+K  ++  A AVF+ + 
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             +I+SW A+I G   +  ++ A++ F +M+   I P+ FT  S + +CA +   E G Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
            HC  +   +     V   LV +Y KCGS+++A  +F  M   + ++W  +++G+ Q G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV-CKQVHALSVKTAFESDDYIVN 337
             E   LF  M   G+  D  T   VL + +    +   C    ++         D    
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520

Query: 338 SLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFG---LGEEALKLYLEMQDR 393
            +ID Y + G  ++A +  K+   + D     +++++    G   +G+ A +  LE   +
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 394 EINPDSFV 401
             NP S+V
Sbjct: 581 --NPASYV 586



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +      G Q+H  +  T ++ + FV ++LV MY+KC +   +  +F  +  R+
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW ++   Y      EEAV  F EM + GI+P++F+L S+I++CA       G + H 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  +NALV +Y K G++EDA  +F ++   D VSW A++ G         
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M  + + P+  T+   L AC+   L E G    C       K   IV +    
Sbjct: 464 TIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG----CDYFDSMQKDHDIVPIDDHY 519

Query: 238 --LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
             ++D+Y++ G   EA      MP   +   W  ++S   +  G+ME
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS-CRLRGNME 565



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 64/272 (23%)

Query: 314 IGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           + V   VH L +KT  ++   +++N L+ AY K G +  A ++F E    +L    ++++
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 373 AYAQFGLGEEALKLYLEMQDRE--------------------------------INPDSF 400
           A A   L  +  +L+  M +R+                                + P   
Sbjct: 88  ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             S+++   + LS    G  VH  +++ GF +  F G+ LV+MYAK G I DA R F E+
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207

Query: 461 P-------------------------------DRGIVSWSAMIGGLAQHGRGKEALQMFG 489
                                           DR  ++W+ M+ GL Q+G   EAL +F 
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           +M  +GV  +  T  S+L AC       E K 
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAASEEGKQ 299



 Score = 43.5 bits (101), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           VH  I+K F     TF  N L+  YAK G +  A R F E+PD  + + +A++  LA   
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              +  ++F  M E     + ++  +++   +  G  A +   + ++ ++  ++P +   
Sbjct: 94  LVPDMERLFASMPER----DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149

Query: 540 ACMI 543
           + MI
Sbjct: 150 SAMI 153


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/676 (40%), Positives = 396/676 (58%), Gaps = 3/676 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L+ ++N    +       +IH   I   Y S  F  N L+++YAK G L  A+ +F    
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204

Query: 159 H--PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           H    IV+W ++I        +  AL LF QM+ S   PN FT++S L A A   +   G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +QLH  + K    ++  VG  LVDMYAKC  M  A  +F  MPE+NL++WN +I G   N
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324

Query: 277 GGDMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
                A  +F  + RE  V  ++ ++S+VL + A+   +   +QVH + VK       Y+
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYV 384

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
           +NSL+D Y KC   ++ VK+F+     D+V    ++  + Q    EEA   +  M+   I
Sbjct: 385 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 444

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            PD    S++L++ A+L+A  QG  +H  IIK G++ +     SL+ MYAKCGS+ DA +
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 504

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F  I D  ++SW+AMI     HG   + +++F  ML +G+ P+H+T V VL AC+H G 
Sbjct: 505 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 564

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V E   HF SM+K   + P  EHYACM+D+LGRAG   EA   +++MP +   SVWGALL
Sbjct: 565 VEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALL 624

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
           GA R Y N+++G+ AAE LF +EP     +VLL+N+   +G  +   +VRR M  N ++K
Sbjct: 625 GACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRK 684

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           EPG SWI+VK+  + FT  DRSH+ S EIY  L+++  L+ K GYV   E   + +EE+E
Sbjct: 685 EPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENE 744

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           +EQ L++HSEKLA+AFGL+  P  + IR+KKNLR C  CHT  +  SKI  REIIVRD+N
Sbjct: 745 EEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDIN 804

Query: 756 RFHHFRNGSCSCGGYW 771
           RFH F +G CSCG YW
Sbjct: 805 RFHRFADGFCSCGDYW 820



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/559 (29%), Positives = 288/559 (51%), Gaps = 27/559 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           +L      + L    Q+H  ++   + S  F+ N+L+ +YAKCG    +  LF       
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +++V+W SL +   H +   +A+  F +M  SG  PN+F+ SS+++A A +   L G+++
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H    K G+D+++F   ALVDMYAK  ++  AV VF  +   ++VSWN++I G   +   
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327

Query: 179 DWALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
           D A+ +F+  ++   + PN  + +S L ACA M     GRQ+H  ++K  +     V   
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+DMY KC   DE   +F  + +++++ WN+++ G +QN    EA + F  M REG+  D
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPD 447

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + + STVL S AS  A+     +H   +K  +  +  I+ SLI  Y KCG + DA ++F+
Sbjct: 448 EASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFE 507

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAY 415
                ++++ T+MI+AY   G   + ++L+  M    I P   +FVC  +L+AC++    
Sbjct: 508 GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVC--VLSACSHTGRV 565

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS----LVNMYAKCGSIDDADRAFSEIPDRGIVS-WSA 470
           E+G     H      + D   G      +V++  + G +D+A R    +P +   S W A
Sbjct: 566 EEGL---AHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGA 622

Query: 471 MIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           ++G   ++G    G+EA +   +M E     N++ L ++   C  +G + EA      + 
Sbjct: 623 LLGACRKYGNLKMGREAAERLFEM-EPYNPGNYVLLANM---CTRSGRLEEA----NEVR 674

Query: 528 KKFGIQPMQEHYAC-MIDI 545
           +  G+  +++   C  ID+
Sbjct: 675 RLMGVNGVRKEPGCSWIDV 693


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/768 (36%), Positives = 438/768 (57%), Gaps = 17/768 (2%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS-LFSCYVHCD 75
           VH  +  +  + D FVA +L+  Y KCG    +  +F  I    ++ WN+ + +C  + +
Sbjct: 157 VHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDE 216

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             + A+   + M L G+ PN  S  +++++C       L R IH    +LG+  D+  A 
Sbjct: 217 RPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVAT 276

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           ALV MY + G++++++AVF+ +   + VSWNA+IA      H   A  ++ +M+     P
Sbjct: 277 ALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRP 336

Query: 196 NMFTYTSALKACAGMELKELGRQ--LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           N  T+ +ALKA      ++LG    LH  +    ++ D +VG  LV MY   G++D AR 
Sbjct: 337 NKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARA 396

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            F  +P KN+++WN +++ +  NG   EA  LF  M R+ +  ++ +   VL      + 
Sbjct: 397 AFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL---GCCED 453

Query: 314 IGVCKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +   + +HA  V    F  +  I N ++  + + G +E+AV  F  +   D V+  + + 
Sbjct: 454 VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVA 513

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFM 431
           A +       A+  +  MQ     PD F   S+++ CA+L   E G+ +   +       
Sbjct: 514 ALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVE 573

Query: 432 SDTFAGNSLVNMYAKCGS-IDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEALQMF 488
            D    ++++NM AKCGS +D+ +R F+ +PD  + +V+W+ MI   AQHG G++AL++F
Sbjct: 574 RDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLF 633

Query: 489 GQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI--QPMQEHYACMIDI 545
             M +   V P+  T VSVL  C+HAGLV +  H F    +  GI  QP+ EHYAC++D+
Sbjct: 634 RIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPV-EHYACLVDV 692

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGR G  +EA + +  MP  A++ VW +LLGA   Y ++E G+ AA     +    S  +
Sbjct: 693 LGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGY 752

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKE-PGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           V+LSNIYA+AG W++  +VR  M + ++KK  PG S I VK++V+ F   DRSH +S  I
Sbjct: 753 VVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAI 812

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           YA+L+ +  L+ +AGYVP     LHDVEE +KEQLL++HSEKLA+AFGLI+ P   +IRV
Sbjct: 813 YAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRV 872

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
            KNLR+C DCHT+ +FI+++  REI VRD NRFHHF ++G CSCG YW
Sbjct: 873 IKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 166/622 (26%), Positives = 295/622 (47%), Gaps = 25/622 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C    DL  G Q+H  +V  G   ++ + N LV MY+KC +  D+   F A+  R 
Sbjct: 30  LLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRG 89

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +WN+L +       + +     K    +  RPN+ ++ +++ A A SGD         
Sbjct: 90  IATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIA-SGDPSSSSSSRA 148

Query: 121 YSI---KLGYDS--------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            SI   ++ +D         D+F A AL+D Y K G +E A+ VF  I+ PD++ WNA I
Sbjct: 149 PSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAI 208

Query: 170 AGCVLH-EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
             C  + E  D AL L ++M    + PN  ++ + L +C       L R +H  + ++  
Sbjct: 209 MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGF 268

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
             D +V   LV MY +CGS+DE+  +F  M  +N ++WN +I+   Q G    A +++  
Sbjct: 269 LGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWR 328

Query: 289 MYREGVGFDQTTLSTVLKSV--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
           M +EG   ++ T  T LK+   +S Q +G    +H        E D  +  +L+  YG  
Sbjct: 329 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST 388

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G ++ A   F    A ++V+  +M+TAY   G   EA++L+  M+ + + P+     ++L
Sbjct: 389 GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 448

Query: 407 NACANLSAYEQGKQVHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
             C ++S   + + +H  ++  G F  ++   N +V M+A+ GS+++A  AF     +  
Sbjct: 449 GCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDS 505

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW+  +  L+       A+  F  M  +G  P+  TLVSV+  C   G +   +   + 
Sbjct: 506 VSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQ 565

Query: 526 MEKKFGIQPMQEHYACMIDILGRAG-KFQEAMELVDTMP-FQANASVWGALLGAARIYKN 583
           +     ++      + +++++ + G    E   L   MP  + +   W  ++ A   Y  
Sbjct: 566 LSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA---YAQ 622

Query: 584 VEVGQHAAEMLFAIEPEKSSTH 605
              G+ A + LF I  ++SS  
Sbjct: 623 HGHGRKALK-LFRIMQQRSSVR 643



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 231/498 (46%), Gaps = 27/498 (5%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L+ ++  C G  D   GR++H   +K G   +    N LV MY+K  +L+DA A F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK---SSEINPNMFTYTSALKACAGMELKE 214
               I +WN +IA             L+ +MK    +E  PN  T  + L A A  +   
Sbjct: 86  RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 215 L----------GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
                       R +H  +   +++ D  V   L+D Y KCG ++ A  +F  +   +LI
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 202

Query: 265 AWNIVISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            WN  I     N    + A L    M+ EG+  ++ +   +L S     ++ + + +HA 
Sbjct: 203 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 262

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
             +  F  D  +  +L+  YG+CG V++++ +F+  +  + V+  +MI A+AQ G    A
Sbjct: 263 VEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAA 322

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH--IIKFGFMSDTFAGNSLV 441
             +Y  MQ     P+     + L A  + S+ + G+   +H  I   G   D   G +LV
Sbjct: 323 FAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALV 382

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
            MY   G+ID A  AF  IP + IVSW+AM+     +GR +EA+++F  M    + PN +
Sbjct: 383 TMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKV 442

Query: 502 TLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA-CMIDILGRAGKFQEAMELV 559
           + ++VL  C     V+EA+  H E +    G+   +   A  ++ +  R+G  +EA+   
Sbjct: 443 SYLAVLGCCED---VSEARSIHAEVVGN--GLFAQESSIANGVVRMFARSGSLEEAVAAF 497

Query: 560 DTMPFQANASVWGALLGA 577
           D    + + S W   + A
Sbjct: 498 DATVVKDSVS-WNTKVAA 514



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 242/508 (47%), Gaps = 23/508 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L +C     L L   +H  V   GF  D  VA +LV MY +CG+  +S  +F+A+  R+
Sbjct: 243 ILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRN 302

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK--I 118
            VSWN++ + +  C     A   +  M   G RPN+ +  + + A   S    LG    +
Sbjct: 303 HVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAAL 362

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+    G + D+    ALV MY   G ++ A A F  I   +IVSWNA++     +   
Sbjct: 363 HGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRA 422

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI-KSDPIVGVG 237
             A++LF  MK   + PN  +Y + L  C   E     R +H  ++   +   +  +  G
Sbjct: 423 REAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSIANG 479

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA-SLFPWMYREGVGF 296
           +V M+A+ GS++EA   F     K+ ++WN  ++  L    D+  A + F  M  EG   
Sbjct: 480 VVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAA-LSAREDLHGAITAFYTMQHEGFRP 538

Query: 297 DQTTLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCG-HVEDAVK 354
           D+ TL +V+   A    + + + +   LS     E D  + +++++   KCG  V++  +
Sbjct: 539 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECER 598

Query: 355 IFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACAN 411
           +F        DLVA  +MI AYAQ G G +ALKL+  MQ R  + PDS    S+L+ C++
Sbjct: 599 LFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSH 658

Query: 412 LSAYEQGKQVHVHIIK---FGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIV 466
               E G  +H   +     G         + LV++  + G + +A+    ++P     V
Sbjct: 659 AGLVEDG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSV 716

Query: 467 SWSAMIGGLAQHGR---GKEALQMFGQM 491
            W++++G  + +G    G+ A + F ++
Sbjct: 717 VWTSLLGACSSYGDLEGGERAARAFIEL 744


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/744 (37%), Positives = 431/744 (57%), Gaps = 9/744 (1%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+ N +V  Y KCG+   +R  FDAI  ++  SW S+ + Y        A+  +K M L 
Sbjct: 59  FLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDL- 117

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDMFSANALVDMYAKVGNLED 149
             +PN    ++++ ACA       G+ IH   S   G   D+   N+L+ MYAK G+LED
Sbjct: 118 --QPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175

Query: 150 AVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           A  +F+ +     + SWNA+IA      H + A++L++ M   ++ P++ T+TS L AC+
Sbjct: 176 AKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACS 232

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            + L + GR++H  +     + D  +   L+ MYA+C  +D+A  IF  +P +++++W+ 
Sbjct: 233 NLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSA 292

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I+   +     EA   +  M  EGV  +  T ++VL + AS   +   + VH   +   
Sbjct: 293 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 352

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           ++       +L+D Y   G +++A  +F +    D    T +I  Y++ G     L+LY 
Sbjct: 353 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYR 412

Query: 389 EMQDREINPDS-FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           EM++    P +  + S +++ACA+L A+   +Q H  I   G +SD     SLVNMY++ 
Sbjct: 413 EMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRW 472

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G+++ A + F ++  R  ++W+ +I G A+HG    AL ++ +M  +G  P+ +T + VL
Sbjct: 473 GNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 532

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+HAGL  + K  F S++  + + P   HY+C+ID+L RAG+  +A EL++ MP + N
Sbjct: 533 YACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 592

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
              W +LLGA+RI+K+V+   HAA  +  ++P   +++VLLSN++A  G    +A VR  
Sbjct: 593 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNT 652

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           M    +KK  G SWIEV D+++ F VGD SH R +EI+A+L  +S  + +AGYVP  E  
Sbjct: 653 MVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEV 712

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           LHDV E EKE LL  HSEKLA+AFGLIAT PG T+R+   LRIC DCH++ +FIS I  R
Sbjct: 713 LHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARR 772

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EIIVRD +RFH FR+G CSCG YW
Sbjct: 773 EIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/525 (31%), Positives = 270/525 (51%), Gaps = 11/525 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFT-GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP-E 58
           VL AC S + L  G  +H  +  T G   D  + NSL+ MYAKCG+  D++RLF+ +   
Sbjct: 127 VLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR 186

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           RSV SWN++ + Y      EEA+  +++M    + P+  + +S+++AC+  G    GRKI
Sbjct: 187 RSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKI 243

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H      G + D+   NAL+ MYA+   L+DA  +F+ +   D+VSW+A+IA     +  
Sbjct: 244 HALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLF 303

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D A++ + +M+   + PN +T+ S L ACA +     GR +H  ++    K   + G  L
Sbjct: 304 DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 363

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFD 297
           VD+Y   GS+DEAR +F  +  ++   W ++I G+ + G       L+  M     V   
Sbjct: 364 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 423

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           +   S V+ + AS  A    +Q H+        SD  +  SL++ Y + G++E A ++F 
Sbjct: 424 KIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFD 483

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           + S+ D +A T++I  YA+ G    AL LY EM+     P       +L AC++    EQ
Sbjct: 484 KMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQ 543

Query: 418 GKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           GKQ+ + I     M    A  S ++++ ++ G + DA+   + +P +   V+WS+++G  
Sbjct: 544 GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGAS 603

Query: 476 AQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCAC--NHAGLVA 517
             H   K A    GQ+ + D V P    L+S + A   N AG+ +
Sbjct: 604 RIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMAS 648



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 250/496 (50%), Gaps = 23/496 (4%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R+IH   I     +++F  N +V  Y K G++  A   F  I   +  SW +++     +
Sbjct: 44  RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQN 102

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIV 234
            H   AL L+++M   ++ PN   YT+ L ACA +E  E G+ +H  +   + +K D I+
Sbjct: 103 GHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVIL 159

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
              L+ MYAKCGS+++A+ +F  M   +++ +WN +I+ + Q+G   EA  L+  M    
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---D 216

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V     T ++VL + ++   +   +++HAL      E D  + N+L+  Y +C  ++DA 
Sbjct: 217 VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 276

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           KIF+     D+V+ ++MI A+A+  L +EA++ Y +MQ   + P+ +  +S+L ACA++ 
Sbjct: 277 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 336

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               G+ VH  I+  G+      G +LV++Y   GS+D+A   F +I +R    W+ +IG
Sbjct: 337 DLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIG 396

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           G ++ G     L+++ +M     +P   I    V+ AC   G  A+A+     +E    I
Sbjct: 397 GYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMI 456

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG----------AARIYK 582
                    ++++  R G  + A ++ D M  + +   W  L+           A  +YK
Sbjct: 457 SDFV-LATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHGEHGLALGLYK 514

Query: 583 NVEV-GQHAAEMLFAI 597
            +E+ G   +E+ F +
Sbjct: 515 EMELEGAEPSELTFMV 530



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L  C +L   E  +Q+H  I      ++ F GN +V  Y KCGS+  A  AF  I  +  
Sbjct: 34  LRQCQDL---ESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKND 89

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHF 523
            SW +M+   AQ+G  + AL ++ +M    + PN +   +VL AC     + E K  H  
Sbjct: 90  YSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSR 146

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG------- 576
            S  K   +  + E+   ++ +  + G  ++A  L + M  + + S W A++        
Sbjct: 147 ISGTKGLKLDVILEN--SLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGH 204

Query: 577 ---AARIYKNVEV 586
              A R+Y++++V
Sbjct: 205 FEEAIRLYEDMDV 217


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 273/758 (36%), Positives = 430/758 (56%), Gaps = 6/758 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q H   +  G+  D      L            +R LF ++P+  +  +N L   +   D
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 76  FLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               ++  +  +   + + P+ F+ +  + AC+     +L   +H +SI  GY S++F  
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVG 146

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           +ALVD+Y K   +  A  VF  +   D V WN +I G V +   D +++LF++M +  + 
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
            +  T T+ L A A ++  ++G  + C  +K+       V  GL+ +Y+KCG ++ AR++
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  +   +LIA+N +ISG   NGG   +  LF  +   G     +T+  ++   + F  +
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHL 326

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            +   +H   VK+    +  +  +    Y K   ++ A  +F ES    +VA  +MI+ Y
Sbjct: 327 HLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGY 386

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSD 433
            Q G  E A+ L+ EM   E  P++   +++L+ACA L +   GK VH H+IK      +
Sbjct: 387 TQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPN 445

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            +   +LV+MYAKCG+I +A + F  + ++  V+W+ MI G   HG G EAL+++ +ML 
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLH 505

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G  P+ +T +SVL AC+HAGLV E +  F +M  K+ I+P+ EHYACM+DILGR+G+ +
Sbjct: 506 LGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLE 565

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           +A+E +  MP +   +VWG LLGA  I+K+ ++ + A+E LF ++P     +VLLSNIY+
Sbjct: 566 KALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYS 625

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
               +   A +R+ +K  KL K PG + IEV    + F  GDRSH+ + +IYAKL++++ 
Sbjct: 626 VERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTG 685

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            + + GY       LHDVEE EKE  +  HSEKLA+AFGLI T PG  IR+ KNLR+C+D
Sbjct: 686 KMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLD 745

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CHT+ +FISKI  R I+VRD NRFHHF++G CSCG YW
Sbjct: 746 CHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A    ++L +G+ +  + +  GF   ++V   L+ +Y+KCG+   +R LF  I    
Sbjct: 215 VLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPD 274

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++++N++ S +      E +V  F+E++ SG R +  ++  +I   +  G   L   IHG
Sbjct: 275 LIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHG 334

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G   +   + A   +Y K+  ++ A  +F +     +V+WNA+I+G   +   + 
Sbjct: 335 FCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTET 394

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           A+ LF++M  +E  PN  T T+ L ACA +     G+ +H  LIK E ++ +  V   LV
Sbjct: 395 AISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALV 453

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG++ EA  +F  M EKN + WN +I G+  +G   EA  L+  M   G      
Sbjct: 454 DMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAV 513

Query: 300 TLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           T  +VL + +    +G  +++ H +  K   E        ++D  G+ G +E A++  K+
Sbjct: 514 TFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKK 573


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 258/682 (37%), Positives = 404/682 (59%), Gaps = 8/682 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAV 153
           + F+   ++ A  G G +    ++H  +++LG    D F++ ALV  Y + G + DA   
Sbjct: 70  DAFTFPPLLRAAQGPGTAA---QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F ++ H D+ +WNA+++G   +     A+ LF +M    +  +  T +S L  C  +  +
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            L   +H   +K  +  +  V   ++D+Y K G ++E R +F  M  ++L+ WN +ISGH
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            Q G    A  +F  M   GV  D  TL ++  ++A    I   + VH   V+  ++  D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 334 YIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            I  N+++D Y K   +E A ++F      D V+  ++IT Y Q GL  EA+ +Y  MQ 
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 393 RE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
            E + P      S+L A ++L A +QG ++H   IK G   D + G  ++++YAKCG +D
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           +A   F + P R    W+A+I G+  HG G +AL +F QM ++G+ P+H+T VS+L AC+
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS 486

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           HAGLV + ++ F  M+  +GI+P+ +HYACM+D+ GRAG+  +A + +  MP + ++++W
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALLGA RI+ NVE+G+ A++ LF ++P+    +VL+SN+YA  G WD V +VR  ++  
Sbjct: 547 GALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 606

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRS--HARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
            L+K PG S IEVK  V  F  G++   H + +EI  +L ++   +   GYVP     L 
Sbjct: 607 NLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQ 666

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           DVEE EKEQ+L +HSE+LA+AFG+I TPP   + + KNLR+C DCH + ++ISKI  REI
Sbjct: 667 DVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREI 726

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           IVRD NRFHHF++G CSCG +W
Sbjct: 727 IVRDSNRFHHFKDGYCSCGDFW 748



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 252/484 (52%), Gaps = 18/484 (3%)

Query: 16  QVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           Q+H   +  G    D F + +LV  Y + G   D+ R FD +  R V +WN++ S     
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               EAV  F  MV+ G+  +  ++SS++  C   GD  L   +H Y++K G D ++F  
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKSS 191
           NA++D+Y K+G LE+   VF  +   D+V+WN++I+G   HE       A+++F  M+ S
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG---HEQGGQVASAVEMFCGMRDS 265

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGSMDE 250
            ++P++ T  S   A A       GR +HC +++      D I G  +VDMYAK   ++ 
Sbjct: 266 GVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEA 325

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVA 309
           A+ +F  MP ++ ++WN +I+G++QNG   EA  ++  M + EG+   Q T  +VL + +
Sbjct: 326 AQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYS 385

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A+    ++HALS+KT    D Y+   +ID Y KCG +++A+ +F+++         +
Sbjct: 386 HLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNA 445

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKF 428
           +I+     G G +AL L+ +MQ   I+PD     SLL AC++    +QG+   ++    +
Sbjct: 446 VISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAY 505

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDA---DRAFSEIPDRGIVSWSAMIGGLAQHGR---GK 482
           G          +V+M+ + G +DDA    R     PD  I  W A++G    HG    GK
Sbjct: 506 GIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI--WGALLGACRIHGNVEMGK 563

Query: 483 EALQ 486
            A Q
Sbjct: 564 VASQ 567



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 225/478 (47%), Gaps = 43/478 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C    D  L L +H   V  G D + FV N+++ +Y K G   + R++FD +  R 
Sbjct: 176 VLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRD 235

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ S +     +  AV  F  M  SG+ P+  +L S+ +A A  GD   GR +H 
Sbjct: 236 LVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHC 295

Query: 121 YSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           Y ++ G+D  D+ + NA+VDMYAK+  +E A  +F  +   D VSWN +I G + +    
Sbjct: 296 YMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLAS 355

Query: 180 WALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A+ ++  M+  E + P   T+ S L A + +   + G ++H   IK  +  D  VG  +
Sbjct: 356 EAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCV 415

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D+YAKCG +DEA ++F   P ++   WN VISG   +G   +A SLF  M +EG+  D 
Sbjct: 416 IDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDH 475

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN--SLIDAYGKCGHVEDAVKIF 356
            T  ++L + +    +   +    + ++TA+       +   ++D +G+ G ++DA    
Sbjct: 476 VTFVSLLAACSHAGLVDQGRNFFNM-MQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFI 534

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +                                  +  I PDS +  +LL AC      E
Sbjct: 535 R----------------------------------NMPIKPDSAIWGALLGACRIHGNVE 560

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI---VSWSAM 471
            GK    ++ +    +  +    + NMYAK G  D  D   S +  + +     WS++
Sbjct: 561 MGKVASQNLFELDPKNVGYY-VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 280/809 (34%), Positives = 436/809 (53%), Gaps = 42/809 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNF----IDSRRLFDAIP 57
            K C +  +L    Q+H  +   G +       +L+    + G F       + L   I 
Sbjct: 40  FKKCKTMTEL---KQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIE 96

Query: 58  ERSVVSWNSLFSCYVH----CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           +  ++  + +FS  +     C    +A+  F++++  G  P+ F+   +++AC  S    
Sbjct: 97  DNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALT 156

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            G ++HG  +K+G++ DMF  N+L+  Y + G ++    VF  +   ++VSW ++I G  
Sbjct: 157 EGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYA 216

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                  A+ LF +M    I PN  T    + ACA ++  +LG Q+   + ++E++ + +
Sbjct: 217 KRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNAL 276

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   LVDMY KCG++D+AR IF    +KNL+ +N ++S +++ G   E  ++   M + G
Sbjct: 277 MVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHG 336

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH----- 348
              D+ T+ + + + +    +   K  H   ++   E  D + N++I+ Y KCG      
Sbjct: 337 PRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMAC 396

Query: 349 --------------------------VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
                                     +E A KIF      DLV+  +MI A  Q  + +E
Sbjct: 397 RVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKE 456

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           A++L+  MQ   I  D      + +AC  L A +  K +H +I K     D   G +LV+
Sbjct: 457 AIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVD 516

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           M+A+CG    A + F+++  R + +W+A IG +A  G G  A+++F +ML+ G+ P+ + 
Sbjct: 517 MFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVV 576

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            V++L A +H GLV +  H F SM+  +GI P   HY CM+D+LGRAG   EA+ L+++M
Sbjct: 577 FVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSM 636

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
             + N  +WG+LL A R++KNV++  +AAE +  ++PE++  HVLLSNIYASAG WD+VA
Sbjct: 637 QMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVA 696

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           KVR  +K+    K PG S IE+  K++ FT GD SH     I   L E+   L   GYVP
Sbjct: 697 KVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVP 756

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
            +   L DV E EKE LL  HSEKLA+AF LI+T  G  IRV KNLRIC DCH+  + +S
Sbjct: 757 DLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVS 816

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K  SREIIVRD NRFH F+ G CSCG YW
Sbjct: 817 KSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 246/541 (45%), Gaps = 64/541 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT    L  G QVHG +V  GF+ D FV NSL+  Y +CG     RR+FD + ER+
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERN 204

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL   Y      +EAV  F EMV  GIRPN  ++  +I+ACA   D  LG ++  
Sbjct: 205 VVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCT 264

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +L  + +    NALVDMY K G ++ A  +F +    ++V +N +++  V       
Sbjct: 265 CIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLARE 324

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +  +M      P+  T  SA+ AC+ ++    G+  H  +++  ++    V   +++
Sbjct: 325 VLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIIN 384

Query: 241 MYAKCGS-------------------------------MDEARMIFHLMPEKNLIAWNIV 269
           MY KCG                                M+ A  IF  MP+ +L++WN +
Sbjct: 385 MYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTM 444

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I   +Q     EA  LF  M  EG+  D+ T+  V  +     A+ + K +H    K   
Sbjct: 445 IGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDI 504

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D ++  +L+D + +CG  + A+++F +    D+ A T+ I A A  G G  A++L+ E
Sbjct: 505 HFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDE 564

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M  + I PD  V  +LL A ++    EQG  +      F  M D +              
Sbjct: 565 MLQQGIKPDGVVFVALLTALSHGGLVEQGWHI------FRSMKDIYG------------- 605

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
              A +A         V +  M+  L + G   EAL +   M  +   PN +   S+L A
Sbjct: 606 --IAPQA---------VHYGCMVDLLGRAGLLSEALSLINSMQME---PNDVIWGSLLAA 651

Query: 510 C 510
           C
Sbjct: 652 C 652



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 8/199 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  AC     L L   +HG +       D  +  +LV M+A+CG+   + ++F+ + +R 
Sbjct: 479 VASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRD 538

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +W +             A+  F EM+  GI+P+     +++ A +  G  L+ +  H 
Sbjct: 539 VSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGG--LVEQGWHI 596

Query: 121 Y-SIK--LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           + S+K   G          +VD+  + G L +A+++   ++  P+ V W +++A C +H+
Sbjct: 597 FRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHK 656

Query: 177 HNDWALKLFQQMKSSEINP 195
           + D A   +   + SE++P
Sbjct: 657 NVDIA--AYAAERISELDP 673


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 239/576 (41%), Positives = 363/576 (63%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           ++FT    L+ CA      +G+  H   I   + +D +    L+++Y KCG  D AR +F
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  +++I+WN +I+G+  N  D+EA  LF  M+REG    + TLS+ L + A+  AI 
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
            CKQ+H +++K A +S  ++  + +D Y KC  ++DA  +F+       V  +S+   + 
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q GL EE L L+   Q   +    F  SS+L+ CA+L+   +G QVH  I+K GF  + F
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLF 294

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
              SLV++YAKCG I+ +   F+++ ++ +V W+AMI   ++H    EA+ +F +M + G
Sbjct: 295 VATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVG 354

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           + PN +T +S+L AC+H GLV E +H+F  +      +P   HY+CM+D+LGR+GK  EA
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            +L+D MPF+  AS+WG+LLG++RI+KN+ + + AAE LF +EPE    HVLLSN+YA++
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G W+NV   R++++D+  KKE G SWIE K K++ F  G+R H    ++Y KL+E+   +
Sbjct: 475 GNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM 534

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            K  +    + DLHDV   +KE+LL HHSEKLA AFGLI+ PP   I + KNLRIC DCH
Sbjct: 535 RKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCH 594

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  + +S I  R++IVRD+NRFHHF++GSCSCG +W
Sbjct: 595 SFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 219/444 (49%), Gaps = 17/444 (3%)

Query: 97  FSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD 156
           F+L  ++  CA     L+G+  HG +I  G  +D  + N L+++Y K G  + A  VF  
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           +    I+SWN +IAG   +  +  ALKLF +M         FT +S L ACA        
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +QLH   IK+ + S   VG   +D+YAKC  + +A  +F  MPEK  + W+ + +G +QN
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   E   LF    REG+   + T+S++L + AS   I    QVHA+ VK  F  + ++ 
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVA 296

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            SL+D Y KCG +E + ++F +    ++V   +MI ++++     EA+ L+ +MQ   I 
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIF 356

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL-----VNMYAKCGSID 451
           P+     S+L+AC++    E+G+    H         T   N L     V++  + G  D
Sbjct: 357 PNEVTYLSILSACSHTGLVEEGR----HYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTD 412

Query: 452 DADRAFSEIPDRGIVS-WSAMIGGLAQHGRGK----EALQMFGQMLEDGVLPNHITLVSV 506
           +A +   ++P     S W +++G    H   +     A Q+F    E+G   NH+ L +V
Sbjct: 413 EAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENG--GNHVLLSNV 470

Query: 507 LCAC-NHAGLVAEAKHHFESMEKK 529
             A  N   +V   K+  +S  KK
Sbjct: 471 YAASGNWENVVVARKYLRDSGAKK 494



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 190/358 (53%), Gaps = 3/358 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  ++ L +G   HG+ +  G  +D    N L+ +Y KCG    +RR+FDA+  RS
Sbjct: 62  LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRS 121

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++ + Y H     EA+  F  M   G +  EF+LSS + ACA     +  +++H 
Sbjct: 122 IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHT 181

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IKL  DS  F   A +D+YAK   ++DA  VF+++     V+W+++ AG V +  ++ 
Sbjct: 182 IAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEE 241

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L LFQ  +   +    FT +S L  CA + L   G Q+H  ++K     +  V   LVD
Sbjct: 242 VLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVD 301

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG ++++  +F  M EKN++ WN +I+   ++    EA  LF  M + G+  ++ T
Sbjct: 302 VYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVT 361

Query: 301 LSTVLKSVASFQAIGVCKQVH--ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             ++L + +    +   +      LS +TA E +    + ++D  G+ G  ++A K+ 
Sbjct: 362 YLSILSACSHTGLVEEGRHYFNLLLSDRTA-EPNVLHYSCMVDVLGRSGKTDEAWKLL 418


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/768 (36%), Positives = 439/768 (57%), Gaps = 17/768 (2%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS-LFSCYVHCD 75
           VH  +  +  + D FVA +L+  Y KCG    +  +F  I    ++ WN+ + +C  + +
Sbjct: 153 VHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDE 212

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             + A+   + M L G+ PN  S  +++++C       L R IH    +LG+  D+  A 
Sbjct: 213 RPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVAT 272

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           ALV MY + G++++++AVF+ +   + VSWNA+IA      H   A  ++ +M+     P
Sbjct: 273 ALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRP 332

Query: 196 NMFTYTSALKACAGMELKELGRQ--LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           N  T+ +ALKA      ++LG    LH  +    ++ D +VG  LV MY   G++D AR 
Sbjct: 333 NKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARA 392

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            F  +P KN+++WN +++ +  NG   EA  LF  M R+ +  ++ +   VL      + 
Sbjct: 393 AFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL---GCCED 449

Query: 314 IGVCKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +   + +HA  V    F  +  I N ++  + + G +E+A+  F  +   D V+  + + 
Sbjct: 450 VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVA 509

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFM 431
           A +       A+  +  MQ     PD F   S+++ CA+L   E G+ +   +       
Sbjct: 510 ALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVE 569

Query: 432 SDTFAGNSLVNMYAKCGS-IDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEALQMF 488
            D    ++++NM AKCGS +D+ +R F+ +PD  + +V+W+ MI   AQHG G++AL++F
Sbjct: 570 RDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLF 629

Query: 489 GQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI--QPMQEHYACMIDI 545
             M +   V P+  T VSVL  C+HAGLV +  H F    +  GI  QP+ EHYAC++D+
Sbjct: 630 RIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPV-EHYACLVDV 688

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGR G  +EA + +  MP  A++ VW +LLGA   Y ++E G+ AA     +    S  +
Sbjct: 689 LGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGY 748

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKE-PGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           V+LSNIYA+AG W++  +VR  M + ++KK  PG S I VK++V+ F   DRSH +S EI
Sbjct: 749 VVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEI 808

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           YA+L+ +  L+ +AGYVP     LHDVEE +KEQLL++HSEKLA+AFGLI+ P   +IRV
Sbjct: 809 YAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRV 868

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
            KNLR+C DCHT+ +FI+++  REI VRD NRFHHF ++G CSCG YW
Sbjct: 869 IKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 292/618 (47%), Gaps = 21/618 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C    DL  G Q+H  +V  G   ++ + N LV MY+KC +  D+   F A+  R 
Sbjct: 30  LLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRG 89

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL------ 114
           + +WN+L +       + +     K    +  RPN  ++ +++ A A SGD         
Sbjct: 90  IATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIA-SGDPSSSSSSRA 148

Query: 115 -GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
             R +H        + D+F A AL+D Y K G +E A+ VF  I+ PD++ WNA I  C 
Sbjct: 149 QARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACA 208

Query: 174 LH-EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            + E  D AL L ++M    + PN  ++ + L +C       L R +H  + ++    D 
Sbjct: 209 GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDV 268

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           +V   LV MY +CGS+DE+  +F  M  +N ++WN +I+   Q G    A +++  M +E
Sbjct: 269 VVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQE 328

Query: 293 GVGFDQTTLSTVLKSV--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           G   ++ T  T LK+   +S Q +G    +H        E D  +  +L+  YG  G ++
Sbjct: 329 GFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAID 388

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A   F    A ++V+  +M+TAY   G   EA++L+  M+ + + P+     ++L  C 
Sbjct: 389 RARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCE 448

Query: 411 NLSAYEQGKQVHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           ++S   + + +H  ++  G F  ++   N +V M+A+ GS+++A  AF     +  VSW+
Sbjct: 449 DVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWN 505

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
             +  L+       A+  F  M  +G  P+  TLVSV+  C   G +   +   + +   
Sbjct: 506 TKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAA 565

Query: 530 FGIQPMQEHYACMIDILGRAG-KFQEAMELVDTMP-FQANASVWGALLGAARIYKNVEVG 587
             ++      + +++++ + G    E   L   MP  + +   W  ++ A   Y     G
Sbjct: 566 IEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA---YAQHGHG 622

Query: 588 QHAAEMLFAIEPEKSSTH 605
           + A + LF I  ++SS  
Sbjct: 623 RKALK-LFRIMQQRSSVR 639



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 232/494 (46%), Gaps = 23/494 (4%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L+ ++  C G  D   GR++H   +K G   +    N LV MY+K  +L+DA A F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK---SSEINPNMFTYTSALKACAGME--- 211
               I +WN +IA             L+ +MK    +E  PN  T  + L A A  +   
Sbjct: 86  RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 212 ---LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
               +   R +H  +   +++ D  V   L+D Y KCG ++ A  +F  +   +LI WN 
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 202

Query: 269 VISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            I     N    + A L    M+ EG+  ++ +   +L S     ++ + + +HA   + 
Sbjct: 203 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEEL 262

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            F  D  +  +L+  YG+CG V++++ +F+  +  + V+  +MI A+AQ G    A  +Y
Sbjct: 263 GFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY 322

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH--IIKFGFMSDTFAGNSLVNMYA 445
             MQ     P+     + L A  + S+ + G+   +H  I   G   D   G +LV MY 
Sbjct: 323 WRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 382

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
             G+ID A  AF  IP + IVSW+AM+     +GR +EA+++F  M    + PN ++ ++
Sbjct: 383 STGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLA 442

Query: 506 VLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA-CMIDILGRAGKFQEAMELVDTMP 563
           VL  C     V+EA+  H E +    G+   +   A  ++ +  R+G  +EAM   D   
Sbjct: 443 VLGCCED---VSEARSIHAEVVGN--GLFAQESSIANGVVRMFARSGSLEEAMAAFDATV 497

Query: 564 FQANASVWGALLGA 577
            + + S W   + A
Sbjct: 498 VKDSVS-WNTKVAA 510



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 242/508 (47%), Gaps = 23/508 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L +C     L L   +H  V   GF  D  VA +LV MY +CG+  +S  +F+A+  R+
Sbjct: 239 ILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRN 298

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK--I 118
            VSWN++ + +  C     A   +  M   G RPN+ +  + + A   S    LG    +
Sbjct: 299 HVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAAL 358

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+    G + D+    ALV MY   G ++ A A F  I   +IVSWNA++     +   
Sbjct: 359 HGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRA 418

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI-KSDPIVGVG 237
             A++LF  MK   + PN  +Y + L  C   E     R +H  ++   +   +  +  G
Sbjct: 419 REAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSIANG 475

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA-SLFPWMYREGVGF 296
           +V M+A+ GS++EA   F     K+ ++WN  ++  L    D+  A + F  M  EG   
Sbjct: 476 VVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAA-LSAREDLHGAITAFYTMQHEGFRP 534

Query: 297 DQTTLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCG-HVEDAVK 354
           D+ TL +V+   A    + + + +   LS     E D  + +++++   KCG  V++  +
Sbjct: 535 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECER 594

Query: 355 IFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACAN 411
           +F        DLVA  +MI AYAQ G G +ALKL+  MQ R  + PDS    S+L+ C++
Sbjct: 595 LFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSH 654

Query: 412 LSAYEQGKQVHVHIIK---FGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIV 466
               E G  +H   +     G         + LV++  + G + +A+    ++P     V
Sbjct: 655 AGLVEDG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSV 712

Query: 467 SWSAMIGGLAQHGR---GKEALQMFGQM 491
            W++++G  + +G    G+ A + F ++
Sbjct: 713 VWTSLLGACSSYGDLEGGERAARAFIEL 740


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 305/866 (35%), Positives = 455/866 (52%), Gaps = 107/866 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL--------- 52
           L++C ++  L     +HG +V  G  S  F+ N+L+  Y  CG   D+RRL         
Sbjct: 31  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 90

Query: 53  -----------------------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                  F  +P R V SWN+L S Y        ++  F  M  
Sbjct: 91  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150

Query: 90  SGIR-PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           SG   PN F+L+  + +C   G   L  ++     K     D   A ALVDM+ + G ++
Sbjct: 151 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVD 210

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI-NPNMF--------- 198
            A  +F  I+ P +   N+++AG V     D AL+LF  M   ++ + NM          
Sbjct: 211 LASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 270

Query: 199 ---------------------TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
                                TYTS+L ACA +     G+QLH  +I+     DP V   
Sbjct: 271 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASA 330

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LV++YAK G   EA+ +F+ + ++N +AW ++ISG LQ G   E+  LF  M  E +  D
Sbjct: 331 LVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLD 390

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q  L+T++    S   + + +Q+H+L +K+       + NSLI  Y KC +++ A  IF+
Sbjct: 391 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFR 450

Query: 358 ESSAVDLVACTSMITAYAQFG-----------------------LG--------EEALKL 386
             +  D+V+ TSMITAY+Q G                       LG        E+ L++
Sbjct: 451 FMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRM 510

Query: 387 YLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           Y  M   E + PD     +L   CA+L A + G Q+    +K G + DT   N+++ MY+
Sbjct: 511 YKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYS 570

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG I +A + F  +  + IVSW+AMI G +QHG GK+A+++F  +L+ G  P++I+ V+
Sbjct: 571 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 630

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL  C+H+GLV E K +F+ M++   I P  EH++CM+D+LGRAG   EA +L+D MP +
Sbjct: 631 VLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 690

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A VWGALL A +I+ N E+ + AA+ +F ++   S +++L++ IYA AG  D+ A++R
Sbjct: 691 PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIR 750

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  +KK PG SW+EV +KV+ F   D SH +   I  KLDE+ + + + GY   V 
Sbjct: 751 KLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY---VR 807

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
           TD      S + ++  HHSEKLAVAFGL+  P    I + KNLRIC DCHT  + IS + 
Sbjct: 808 TD------STRSEI--HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVT 859

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            RE ++RD  RFHHF  GSCSCG YW
Sbjct: 860 GREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 95/472 (20%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM------ 253
           +  AL++C         R LH  L+ + + S   +   L+  Y  CG++ +AR       
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 254 --------------------------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                                     +F  MP +++ +WN ++SG+ Q+   + +   F 
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146

Query: 288 WMYREGVGFDQT-TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            M+R G  +    TL+  +KS  +     +  Q+ A+  K   + D  +  +L+D + +C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206

Query: 347 GHVEDAVKIF---KESSAV----------------------------DLVACTSMITAYA 375
           G V+ A ++F   KE +                              D+V+   M++A +
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G   EAL + ++MQ + +  DS   +S L ACA LS+   GKQ+H  +I+     D +
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             ++LV +YAK G   +A   F+ + DR  V+W+ +I G  Q+G   E++++F QM  + 
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 386

Query: 496 VLPNHITLVSVLCAC---------------------------NHAGLVAEAK-HHFESME 527
           +  +   L +++  C                           +++ +   AK  + +S E
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446

Query: 528 KKFGIQPMQE--HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             F     ++   +  MI    + G   +A E  D M  + N   W A+LGA
Sbjct: 447 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGA 497



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 35/295 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           ++  C S+ DL LG Q+H + + +G      V+NSL+ MYAKC                 
Sbjct: 397 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 456

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         GN   +R  FD + E++V++WN++   Y+     E+ +  +K M+ 
Sbjct: 457 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 516

Query: 90  SG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              +RP+  +  ++   CA  G + LG +I G ++K+G   D   ANA++ MY+K G + 
Sbjct: 517 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 576

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  VF  +   DIVSWNA+I G   H     A+++F  +      P+  +Y + L  C+
Sbjct: 577 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 636

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMPEK 261
              L + G+  +  ++K      P +     +VD+  + G + EA+ +   MP K
Sbjct: 637 HSGLVQEGK-FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 690



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 14/189 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + K C       LG Q+ G  V  G   D  VAN+++ MY+KCG  +++R++FD +  + 
Sbjct: 530 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 589

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG----- 115
           +VSWN++ + Y      ++A+  F +++  G +P+  S  ++++ C+ SG    G     
Sbjct: 590 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFD 649

Query: 116 --RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
             ++ H  S  L + S M      VD+  + G+L +A  +  D+   P    W A+++ C
Sbjct: 650 MMKRAHNISPGLEHFSCM------VDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 703

Query: 173 VLHEHNDWA 181
            +H +N+ A
Sbjct: 704 KIHGNNELA 712


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 305/866 (35%), Positives = 455/866 (52%), Gaps = 107/866 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL--------- 52
           L++C ++  L     +HG +V  G  S  F+ N+L+  Y  CG   D+RRL         
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 70

Query: 53  -----------------------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                  F  +P R V SWN+L S Y        ++  F  M  
Sbjct: 71  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130

Query: 90  SGIR-PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           SG   PN F+L+  + +C   G   L  ++     K     D   A ALVDM+ + G ++
Sbjct: 131 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVD 190

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI-NPNMF--------- 198
            A  +F  I+ P +   N+++AG V     D AL+LF  M   ++ + NM          
Sbjct: 191 LASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 250

Query: 199 ---------------------TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
                                TYTS+L ACA +     G+QLH  +I+     DP V   
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASA 310

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LV++YAK G   EA+ +F+ + ++N +AW ++ISG LQ G   E+  LF  M  E +  D
Sbjct: 311 LVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLD 370

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q  L+T++    S   + + +Q+H+L +K+       + NSLI  Y KC +++ A  IF+
Sbjct: 371 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFR 430

Query: 358 ESSAVDLVACTSMITAYAQFG-----------------------LG--------EEALKL 386
             +  D+V+ TSMITAY+Q G                       LG        E+ L++
Sbjct: 431 FMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRM 490

Query: 387 YLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           Y  M   E + PD     +L   CA+L A + G Q+    +K G + DT   N+++ MY+
Sbjct: 491 YKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYS 550

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KCG I +A + F  +  + IVSW+AMI G +QHG GK+A+++F  +L+ G  P++I+ V+
Sbjct: 551 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 610

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL  C+H+GLV E K +F+ M++   I P  EH++CM+D+LGRAG   EA +L+D MP +
Sbjct: 611 VLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 670

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
             A VWGALL A +I+ N E+ + AA+ +F ++   S +++L++ IYA AG  D+ A++R
Sbjct: 671 PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIR 730

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  +KK PG SW+EV +KV+ F   D SH +   I  KLDE+ + + + GY   V 
Sbjct: 731 KLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY---VR 787

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
           TD      S + ++  HHSEKLAVAFGL+  P    I + KNLRIC DCHT  + IS + 
Sbjct: 788 TD------STRSEI--HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVT 839

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            RE ++RD  RFHHF  GSCSCG YW
Sbjct: 840 GREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 95/472 (20%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM------ 253
           +  AL++C         R LH  L+ + + S   +   L+  Y  CG++ +AR       
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 254 --------------------------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                                     +F  MP +++ +WN ++SG+ Q+   + +   F 
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 288 WMYREGVGFDQT-TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            M+R G  +    TL+  +KS  +     +  Q+ A+  K   + D  +  +L+D + +C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 347 GHVEDAVKIF---KESSAV----------------------------DLVACTSMITAYA 375
           G V+ A ++F   KE +                              D+V+   M++A +
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G   EAL + ++MQ + +  DS   +S L ACA LS+   GKQ+H  +I+     D +
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             ++LV +YAK G   +A   F+ + DR  V+W+ +I G  Q+G   E++++F QM  + 
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 366

Query: 496 VLPNHITLVSVLCAC---------------------------NHAGLVAEAK-HHFESME 527
           +  +   L +++  C                           +++ +   AK  + +S E
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426

Query: 528 KKFGIQPMQE--HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             F     ++   +  MI    + G   +A E  D M  + N   W A+LGA
Sbjct: 427 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGA 477



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 35/295 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           ++  C S+ DL LG Q+H + + +G      V+NSL+ MYAKC                 
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 436

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         GN   +R  FD + E++V++WN++   Y+     E+ +  +K M+ 
Sbjct: 437 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 496

Query: 90  SG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              +RP+  +  ++   CA  G + LG +I G ++K+G   D   ANA++ MY+K G + 
Sbjct: 497 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 556

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  VF  +   DIVSWNA+I G   H     A+++F  +      P+  +Y + L  C+
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMPEK 261
              L + G+  +  ++K      P +     +VD+  + G + EA+ +   MP K
Sbjct: 617 HSGLVQEGK-FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 670



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 14/189 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + K C       LG Q+ G  V  G   D  VAN+++ MY+KCG  +++R++FD +  + 
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG----- 115
           +VSWN++ + Y      ++A+  F +++  G +P+  S  ++++ C+ SG    G     
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFD 629

Query: 116 --RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
             ++ H  S  L + S M      VD+  + G+L +A  +  D+   P    W A+++ C
Sbjct: 630 MMKRAHNISPGLEHFSCM------VDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 683

Query: 173 VLHEHNDWA 181
            +H +N+ A
Sbjct: 684 KIHGNNELA 692


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/808 (34%), Positives = 452/808 (55%), Gaps = 39/808 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+      D+ L   +H  ++  G   D  + N+++  Y K G  +D+  +F  +    
Sbjct: 110 LLRLSVKYTDIDLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPD 167

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS+++L S +   +   EA+  F  M +SGI PNE+S  +++ AC  S +  +G ++H 
Sbjct: 168 VVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHA 227

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IKLGY   +F ANAL+ +Y K G L+ A+ +F ++   DI SWN +I+  V     + 
Sbjct: 228 LAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEK 287

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF+ +  ++    + FT ++ L ACA    +  GR++H   I++ ++++  V   ++
Sbjct: 288 ALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAII 347

Query: 240 DMYAKCGSMDEA-----RM--------------------------IFHLMPEKNLIAWNI 268
             Y +CGS++       RM                          +F+ MPEKN +++N 
Sbjct: 348 GFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNA 407

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +++G  +N   ++A +LF  M +EG      TL+ V+ +      + + +Q+H   +K  
Sbjct: 408 LLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFG 467

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKL 386
           F S+  I  +LID   KCG ++DA ++F+  S    + +  TSMI  YA+ GL EEA+ L
Sbjct: 468 FRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICL 527

Query: 387 YLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   Q    +  D    +S+L  C  L  +E GKQ+H   +K GF ++   GNS+++MY+
Sbjct: 528 FYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYS 587

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KC +IDDA +AF+ +P   +VSW+ +I G   H +G EAL ++  M + G+ P+ IT V 
Sbjct: 588 KCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVL 647

Query: 506 VLCAC--NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           ++ A     + L+ E +  F SM+    ++P  EHYA ++ +LG  G  +EA EL++ MP
Sbjct: 648 IVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMP 707

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
           F    SVW ALL   R++ N  +G+  A+ +  +EP   ST+VL+SN+YA++G W     
Sbjct: 708 FDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEM 767

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           VR  M+D  L+K P  SW+ +K +++TF   D+SH +S +IY+ LD +     KAGY P 
Sbjct: 768 VRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPD 827

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
           +   L +VEE +K+  L++HS KLA  +GL+ T PG  IRV KN+ +C DCHT  ++ + 
Sbjct: 828 MSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATV 887

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  REII RD + FH F NG CSC GYW
Sbjct: 888 VTQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 13/306 (4%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L  +L+    +  I + + +HA  +K     D ++ N++I AY K G V DA ++F   S
Sbjct: 107 LFNLLRLSVKYTDIDLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMS 164

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+ +++I+++++     EA++L+  M+   I P+ +   ++L AC      E G Q
Sbjct: 165 TPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQ 224

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   IK G+    F  N+L+ +Y KCG +D A   F E+P R I SW+ MI  L +   
Sbjct: 225 VHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLS 284

Query: 481 GKEALQMFGQMLED-GVLPNHITLVSVLCACN--HAGLVAEAKHHFESMEKKFGIQPMQE 537
            ++AL++F  + ++ G   +  TL ++L AC   HA +     H +     + G++    
Sbjct: 285 YEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAY---AIRIGLENNLS 341

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
               +I    R G       L + MP + +   W  ++ A   +  V++   A +M F  
Sbjct: 342 VSNAIIGFYTRCGSLNHVAALFERMPVR-DIITWTEMITAYMEFGLVDL---AVDM-FNK 396

Query: 598 EPEKSS 603
            PEK+S
Sbjct: 397 MPEKNS 402


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/569 (44%), Positives = 363/569 (63%), Gaps = 1/569 (0%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+ CA       GR  H  +I++ ++ D +    L++MY+KC  +D AR  F+ MP K+L
Sbjct: 50  LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSL 109

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN VI    QN  D EA  L   M REG  F++ T+S+VL + A   AI  C Q+HA 
Sbjct: 110 VSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAF 169

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S+K A +S+ ++  +L+  Y KC  ++DA ++F+     + V  +SM+  Y Q G  EEA
Sbjct: 170 SIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEA 229

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L ++   Q    + D F+ SS ++ACA L+   +GKQVH    K GF S+ +  +SL++M
Sbjct: 230 LLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDM 289

Query: 444 YAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           YAKCG I +A   F  + + R IV W+AMI G A+H R  EA+ +F +M + G  P+ +T
Sbjct: 290 YAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVT 349

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            V VL AC+H GL  E + +F+ M ++  + P   HY+CMIDILGRAG   +A +L++ M
Sbjct: 350 YVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERM 409

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           PF A +S+WG+LL + +IY N+E  + AA+ LF +EP  +  H+LL+NIYA+   WD VA
Sbjct: 410 PFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVA 469

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           + R+ +++  ++KE G SWIE+K+K+++FTVG+R+H +  +IYAKLD +   L K  Y  
Sbjct: 470 RARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKV 529

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
               DLHDVEE+ K+ LL HHSEKLA+ FGL+  P    IR+ KNLRIC DCHT  + +S
Sbjct: 530 DTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVS 589

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K  SREIIVRD NRFHHF++G CSCG +W
Sbjct: 590 KSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 216/428 (50%), Gaps = 5/428 (1%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L  ++  CA +  S+ GR  H   I++G + D+ ++N L++MY+K   ++ A   F ++
Sbjct: 45  NLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEM 104

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
               +VSWN VI     +  +  ALKL  QM+      N FT +S L  CA         
Sbjct: 105 PVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECM 164

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           QLH   IK  I S+  VG  L+ +YAKC S+ +A  +F  MPEKN + W+ +++G++QNG
Sbjct: 165 QLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNG 224

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA  +F      G   D   +S+ + + A    +   KQVHA+S K+ F S+ Y+ +
Sbjct: 225 FHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSS 284

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           SLID Y KCG + +A  +F+    V  +V   +MI+ +A+     EA+ L+ +MQ R   
Sbjct: 285 SLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFF 344

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADR 455
           PD      +LNAC+++  +E+G++    +++   +S +    S ++++  + G +  A  
Sbjct: 345 PDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYD 404

Query: 456 AFSEIPDRGIVS-WSAMIGGLAQHGRGK--EALQMFGQMLEDGVLPNHITLVSVLCACNH 512
               +P     S W +++     +G  +  E    +   +E     NHI L ++  A   
Sbjct: 405 LIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKK 464

Query: 513 AGLVAEAK 520
              VA A+
Sbjct: 465 WDEVARAR 472



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 198/400 (49%), Gaps = 12/400 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   +    G   H  ++  G + D   +N L+ MY+KC     +R+ F+ +P +S
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++           EA+    +M   G   NEF++SS++  CA     L   ++H 
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +SIK   DS+ F   AL+ +YAK  +++DA  +F+ +   + V+W++++AG V +  ++ 
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F+  +    + + F  +SA+ ACAG+     G+Q+H    K    S+  V   L+D
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 241 MYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MYAKCG + EA ++F  ++  ++++ WN +ISG  ++    EA  LF  M + G   D  
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI-VNSLIDAYGKCGHVEDAVKI--- 355
           T   VL + +        ++   L V+    S   +  + +ID  G+ G V  A  +   
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408

Query: 356 --FKESSAV--DLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             F  +S++   L+A   +   Y      E A K   EM+
Sbjct: 409 MPFNATSSMWGSLLASCKI---YGNIEFAEIAAKYLFEME 445



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           LL  CA   +   G+  H  II+ G   D    N L+NMY+KC  +D A + F+E+P + 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VSW+ +IG L Q+   +EAL++  QM  +G   N  T+ SVLC C     + E      
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECM-QLH 167

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
           +   K  I         ++ +  +    ++A ++ ++MP + NA  W +++ 
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMA 218


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/682 (38%), Positives = 394/682 (57%), Gaps = 1/682 (0%)

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +GI  +  S   +  AC        GR  H    +   +   F  N+++ MY K G+L D
Sbjct: 4   AGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLAD 63

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF ++   ++VSWN +I+    +   D    +F  M   E  PN  TY   L++   
Sbjct: 64  ARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLN 123

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
               E+G+Q+H   I+  + S+  V   + +MY KCG ++ A ++F  M EKN +AW  +
Sbjct: 124 PSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGI 183

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           + G+ Q    M+A +LF  M  EGV  D+   S VLK+ A  + +   +Q+H   VK   
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 243

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           ES+  +   L+D Y KC ++E A K F+  S  + V+ +++IT Y Q G  EEALK +  
Sbjct: 244 ESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFES 303

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           ++ R ++ +SF  +S+  AC+ L+ +  G Q H   IK   ++     ++++ MY++CG 
Sbjct: 304 LRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGR 363

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +D A R F  I D   V+W+A+I G A  G   EAL++F +M + GV PN +T ++VL A
Sbjct: 364 LDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTA 423

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H+GLV E + + ESM   +G+    +HY CM+DI  RAG  QEA+EL+ +MPF  +A 
Sbjct: 424 CSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAM 483

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
            W  LLG    Y+N+E+G+ AAE LF ++PE ++ ++L+ N+YAS G W   A VR+ M 
Sbjct: 484 SWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMA 543

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           +  L+KE   SWI VK KV+ F VGD+ H +++EIY+KL+ ++D + K     + E D+ 
Sbjct: 544 ERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVS 603

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           +     KEQLL  HSE+LA+AFGLI+TP  A + V KNLR C DCH   + +S I  REI
Sbjct: 604 NSLPERKEQLLV-HSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREI 662

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           +VRD  RFHHF+ G CSC  YW
Sbjct: 663 VVRDSFRFHHFKLGECSCNDYW 684



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 250/476 (52%), Gaps = 2/476 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC   K LF G   H  +  T  +  EF+ NS++ MY KCG+  D+R++FD + ER+
Sbjct: 16  LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++ S Y      ++  C F  M+    +PN  +    + +        +G++IH 
Sbjct: 76  LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHS 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++I+ G  S+     A+ +MY K G LE A  VF+ +   + V+W  ++ G    E    
Sbjct: 136 HAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M +  +  + + ++  LKACAG+E    GRQ+H  ++K+ ++S+  VG  LVD
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KC +++ A   F  + E N ++W+ +I+G+ Q G   EA   F  +    V  +  T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++ ++ ++        Q HA ++K++  +  +  +++I  Y +CG ++ A ++F+   
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID 375

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D VA T++I  YA  G   EALKL+  MQD  + P++    ++L AC++     +G+Q
Sbjct: 376 DPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ 435

Query: 421 -VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
            +      +G  +     + +V++Y++ G + +A      +P     +SW  ++GG
Sbjct: 436 YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 286/802 (35%), Positives = 432/802 (53%), Gaps = 75/802 (9%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N ++  YAK G+  D+  LF  +P R V SWN++ S Y        A+  F  M  +G  
Sbjct: 96  NIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDS 155

Query: 94  -PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDM------------ 140
            PN F+   ++ +C   G   +  ++ G   K     D     ALVDM            
Sbjct: 156 LPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASK 215

Query: 141 -------------------YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
                              YAK   ++ A+ +FK +   D+VSWN VI+          A
Sbjct: 216 QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREA 275

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L +   M    + P+  TYTS+L ACA +   E G+QLH  +I+     DP V   +V++
Sbjct: 276 LDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVEL 335

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCG   EA+ +F  + ++N ++W ++I G LQ G   E+  LF  M  E +  DQ  L
Sbjct: 336 YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFAL 395

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +T++    +   I +  Q+H+L +K+       + NSLI  Y KCG++++A  IF   + 
Sbjct: 396 ATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAE 455

Query: 362 VDLVACTSMITAYAQFG-----------------------LG--------EEALKLYLEM 390
            D+V+ T MITAY+Q G                       LG        E+ LK+Y +M
Sbjct: 456 RDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDM 515

Query: 391 -QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
             ++++ PD     +L   CA++ A + G Q+  H +K G + DT   N+++ MY+KCG 
Sbjct: 516 LTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGR 575

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I +A +AF  +  + +VSW+AMI G +QHG GK+A+++F  +L  G  P++I+ V+VL  
Sbjct: 576 ISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSG 635

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H+GLV E K +F+ M++   I P  EH++CM+D+LGRAG   EA  L+D MP +  A 
Sbjct: 636 CSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAE 695

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWGALL A + + N ++ + AA+ LF ++   S  ++LL+ +YA AG  D+ A+VR+ M+
Sbjct: 696 VWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMR 755

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           D  +KK PG SW+EV ++V+ F   D SH +   I  KLDE+ + +   GYV        
Sbjct: 756 DKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR------- 808

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
              ES + ++  HHSEKLAVAFG+++ P    I + KNLRIC DCHT  + IS +  RE 
Sbjct: 809 --TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREF 864

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           ++RD  RFHHF+ GSCSC  YW
Sbjct: 865 VIRDGVRFHHFKGGSCSCMDYW 886



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 248/531 (46%), Gaps = 69/531 (12%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++ + N +++ YAK+G+L DAV +F  +   D+ SWN +++G         AL +F  
Sbjct: 89  EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148

Query: 188 MKSS-EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           M+ + +  PN FT+   +K+C  +   E+  QL   L K + + DP V   LVDM  +CG
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208

Query: 247 SMD-------------------------------EARMIFHLMPEKNLIAWNIVISGHLQ 275
           +MD                                A  IF  MPE+++++WN+VIS   +
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           +G   EA  +   M+ +GV  D TT ++ L + A   ++   KQ+H   ++     D Y+
Sbjct: 269 SGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYV 328

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +++++ Y KCG  ++A ++F      + V+ T +I  + Q+G   E+++L+ +M+   +
Sbjct: 329 ASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELM 388

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             D F  ++L++ C N      G Q+H   +K G        NSL++MYAKCG++ +A+ 
Sbjct: 389 AVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAEL 448

Query: 456 AFSEIPDRGIVSWS-------------------------------AMIGGLAQHGRGKEA 484
            F+ + +R IVSW+                               AM+G   QHG  ++ 
Sbjct: 449 IFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDG 508

Query: 485 LQMFGQML-EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           L+M+  ML E  V+P+ +T V++   C   G   +          K G+         +I
Sbjct: 509 LKMYSDMLTEKDVIPDWVTYVTLFRGCADIG-ANKLGDQIIGHTVKVGLILDTSVVNAVI 567

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
            +  + G+  EA +  D +  +   S W A++     Y    +G+ A E+ 
Sbjct: 568 TMYSKCGRISEARKAFDFLSRKDLVS-WNAMITG---YSQHGMGKQAIEIF 614



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 223/504 (44%), Gaps = 82/504 (16%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC     L  G Q+H  V+      D +VA+++V +YAKCG F +++R+F ++ +R+ 
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNS 357

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW  L   ++      E+V  F +M    +  ++F+L+++I+ C  + D  LG ++H  
Sbjct: 358 VSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS----------------- 164
            +K G+   +  +N+L+ MYAK GNL++A  +F  +   DIVS                 
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477

Query: 165 --------------WNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAG 209
                         WNA++   + H   +  LK++  M +  ++ P+  TY +  + CA 
Sbjct: 478 REFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCAD 537

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +LG Q+    +K+ +  D  V   ++ MY+KCG + EAR  F  +  K+L++WN +
Sbjct: 538 IGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAM 597

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI-------GVCKQVHA 322
           I+G+ Q+G   +A  +F  +  +G   D  +   VL   +    +        + K+ H 
Sbjct: 598 ITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHN 657

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           +S      S       ++D  G+ GH+ +A  +  E                        
Sbjct: 658 ISPGLEHFS------CMVDLLGRAGHLIEAKNLIDE------------------------ 687

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV- 441
                       + P + V  +LL+AC      +  +    H+  F   S    G  L+ 
Sbjct: 688 ----------MPMKPTAEVWGALLSACKTHGNNDLAELAAKHL--FDLDSPGSGGYMLLA 735

Query: 442 NMYAKCGSIDDADRAFSEIPDRGI 465
            MYA  G  DD+ +    + D+GI
Sbjct: 736 KMYADAGKSDDSAQVRKLMRDKGI 759



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 197/469 (42%), Gaps = 95/469 (20%)

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM--------- 253
           AL++C         R LH  LI + + S   +   L+  Y  CG++ +AR          
Sbjct: 31  ALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEP 90

Query: 254 -----------------------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                                  +F  MP +++ +WN ++SG+ Q+G  + A  +F  M 
Sbjct: 91  NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150

Query: 291 REGVGFDQT-TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH- 348
           + G       T   V+KS  +     V  Q+  L  K   + D  +  +L+D   +CG  
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210

Query: 349 ------------------------------VEDAVKIFKESSAVDLVACTSMITAYAQFG 378
                                         V+ A++IFK     D+V+   +I+A ++ G
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              EAL + ++M  + + PDS   +S L ACA LS+ E GKQ+HV +I+     D +  +
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           ++V +YAKCG   +A R FS + DR  VSW+ +IGG  Q+G   E++++F QM  + +  
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390

Query: 499 NHITLVSVLCACNHA----------GLVAEAKH------------------HFESMEKKF 530
           +   L +++  C +            L  ++ H                  + ++ E  F
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF 450

Query: 531 GIQPMQE--HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                ++   +  MI    + G   +A E  D M  + N   W A+LGA
Sbjct: 451 NFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR-NVITWNAMLGA 498



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 36/314 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  C +  D+ LG Q+H + + +G      V+NSL+ MYAKCGN  ++  +F+ + ER 
Sbjct: 398 LISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERD 457

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG----------------------------- 91
           +VSW  + + Y     + +A  FF +M                                 
Sbjct: 458 IVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLT 517

Query: 92  ---IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              + P+  +  ++   CA  G + LG +I G+++K+G   D    NA++ MY+K G + 
Sbjct: 518 EKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRIS 577

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A   F  +   D+VSWNA+I G   H     A+++F  + +    P+  +Y + L  C+
Sbjct: 578 EARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCS 637

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMPEKNLI-A 265
              L E G+  +  ++K +    P +     +VD+  + G + EA+ +   MP K     
Sbjct: 638 HSGLVEEGK-FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEV 696

Query: 266 WNIVISGHLQNGGD 279
           W  ++S    +G +
Sbjct: 697 WGALLSACKTHGNN 710



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 150/367 (40%), Gaps = 72/367 (19%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ES 359
           L+  L+S  +  A+   + +H+  +     S  ++ N+L+ AY  CG + DA  + + E 
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN----------------------- 396
           +  +++    M+  YA+ G   +A++L+  M  R++                        
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 397 ---------PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
                    P++F    ++ +C  L  +E   Q+   + KF    D     +LV+M  +C
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207

Query: 448 GSIDDADRAFSEI-------------------------------PDRGIVSWSAMIGGLA 476
           G++D A + FS I                               P+R +VSW+ +I  L+
Sbjct: 208 GAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALS 267

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPM 535
           + GR +EAL M   M   GV P+  T  S L AC     +   K  H + +     I P 
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY----KNVEVGQHAA 591
               + M+++  + G F+EA  +  ++    N+  W  L+G    Y    ++VE+     
Sbjct: 328 VA--SAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIGGFLQYGCFSESVELFNQMR 384

Query: 592 EMLFAIE 598
             L A++
Sbjct: 385 AELMAVD 391


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 287/770 (37%), Positives = 424/770 (55%), Gaps = 115/770 (14%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS--------- 164
           + R +H + I  G+    +  N L+D+Y K  +L  A  +F +I  PDIV+         
Sbjct: 33  IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92

Query: 165 ------------------------WNAVIAGCVLHEHND---WALKLFQQMKSSEINPNM 197
                                   +NA+I G   + HN+    A++LF+ +  +   P+ 
Sbjct: 93  SAGNSNLAREIFFATPLGIRDTVCYNAMITG---YSHNNDGFGAIELFRDLLRNGFRPDN 149

Query: 198 FTYTSALKACAGM-ELKELGRQLHCSLIKME----------------------------- 227
           FT+TS L A A + E ++  +Q+HC+++K                               
Sbjct: 150 FTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSL 209

Query: 228 -----------IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
                       + D +    ++  Y + G +D AR     M EK ++AWN +ISG++ +
Sbjct: 210 MAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHH 269

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDY- 334
           G  +EA  +F  MY  G+ +D+ T ++VL + A+       KQVHA  ++T    S D+ 
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFS 329

Query: 335 --IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC------------------------- 367
             + N+L   Y KCG V++A ++F +    DLV+                          
Sbjct: 330 LSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389

Query: 368 ------TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
                 T MI+  AQ G GEE+LKL+  M+     P  +  +  + ACA L+A   G+Q+
Sbjct: 390 RNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQL 449

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  +++ GF S   AGN+L+ MYAKCG ++ A   F  +P    VSW+AMI  L QHG G
Sbjct: 450 HAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHG 509

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            +AL++F  ML++ +LP+ IT ++VL  C+HAGLV E   +F+SM   +GI P ++HYA 
Sbjct: 510 AQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYAR 569

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+L RAGKF EA ++++TMP +    +W ALL   RI+ N+++G  AAE LF + P+ 
Sbjct: 570 MIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQH 629

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
             T+VLLSN+YA+ G WD+VAKVR+ M+D  +KKEPG SWIEV++KV+ F V D  H   
Sbjct: 630 DGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEV 689

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           + +Y  L+E+   + K GY+P  +  LHD+E  +KE +L  HSEKLAV FGL+  P GAT
Sbjct: 690 QAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGAT 749

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +RV KNLRIC DCH +F+F+SK+V REI+VRD  RFHHF+NG CSCG YW
Sbjct: 750 VRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 216/475 (45%), Gaps = 71/475 (14%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + DE    +++  Y + G    +R+  D + E+ VV+WN++ S YVH  F  EA+  F++
Sbjct: 222 ERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRK 281

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL----GYDSDMFSANALVDMYA 142
           M L GI+ +EF+ +S+++ACA +G  L G+++H Y ++       D  +   NAL  +Y 
Sbjct: 282 MYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYW 341

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV--------------LHEHN--DW------ 180
           K G +++A  VF  +   D+VSWNA+++G V              + E N   W      
Sbjct: 342 KCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISG 401

Query: 181 ---------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    +LKLF +MKS    P  + +  A+ ACA +     GRQLH  L+++   S 
Sbjct: 402 LAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSS 461

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              G  L+ MYAKCG ++ A  +F  MP  + ++WN +I+   Q+G   +A  LF  M +
Sbjct: 462 LSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLK 521

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           E +  D+ T  TVL + +           HA  V+   E   Y   S+   YG C   + 
Sbjct: 522 EDILPDRITFLTVLSTCS-----------HAGLVE---EGHRYF-KSMSGLYGICPGEDH 566

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
             +               MI    + G   EA  +   ++   + P   +  +LL  C  
Sbjct: 567 YAR---------------MIDLLCRAGKFSEAKDM---IETMPVEPGPPIWEALLAGCRI 608

Query: 412 LSAYEQGKQVHVHIIKFGFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               + G Q    + +     D T+    L NMYA  G  DD  +    + D+G+
Sbjct: 609 HGNMDLGIQAAERLFELMPQHDGTYV--LLSNMYATVGRWDDVAKVRKLMRDKGV 661



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 250/595 (42%), Gaps = 113/595 (18%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE------------------ 58
           VH  ++ +GF    ++ N L+ +Y K  + + +  LFD I +                  
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 59  ---------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
                          R  V +N++ + Y H +    A+  F++++ +G RP+ F+ +S++
Sbjct: 97  SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156

Query: 104 NACAG-SGDSLLGRKIHGYSIKLG------------------------------------ 126
            A A    D    ++IH   +K G                                    
Sbjct: 157 GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKL 216

Query: 127 ----YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
                + D  S   ++  Y + G L+ A      +    +V+WNA+I+G V H     AL
Sbjct: 217 FDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEAL 276

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS----DPIVGVGL 238
           ++F++M    I  + FTYTS L ACA       G+Q+H  +++ E +        V   L
Sbjct: 277 EMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNAL 336

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW- 288
             +Y KCG +DEAR +F+ MP K+L++WN ++SG++  G   EA S F          W 
Sbjct: 337 ATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWT 396

Query: 289 -----MYREGVGFDQTTLSTVLKS-------VASFQAIGVC---------KQVHALSVKT 327
                + + G G +   L   +KS        A   AI  C         +Q+HA  V+ 
Sbjct: 397 VMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRL 456

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            F+S     N+LI  Y KCG VE A  +F     +D V+  +MI A  Q G G +AL+L+
Sbjct: 457 GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELF 516

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAK 446
             M   +I PD     ++L+ C++    E+G +    +   +G          ++++  +
Sbjct: 517 ELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCR 576

Query: 447 CGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            G   +A      +P + G   W A++ G   HG     +Q   ++ E  ++P H
Sbjct: 577 AGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFE--LMPQH 629



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 37/309 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFT----GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VL AC +      G QVH  ++ T      D    V N+L  +Y KCG   ++R++F+ +
Sbjct: 297 VLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQM 356

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGI-------------- 92
           P + +VSWN++ S YV+   ++EA  FF+EM          ++SG+              
Sbjct: 357 PVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFN 416

Query: 93  -------RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
                   P +++ +  I ACA     + GR++H   ++LG+DS + + NAL+ MYAK G
Sbjct: 417 RMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCG 476

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +E A  +F  + + D VSWNA+IA    H H   AL+LF+ M   +I P+  T+ + L 
Sbjct: 477 VVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLS 536

Query: 206 ACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
            C+   L E G +   S+  +  I         ++D+  + G   EA+ +   MP E   
Sbjct: 537 TCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGP 596

Query: 264 IAWNIVISG 272
             W  +++G
Sbjct: 597 PIWEALLAG 605



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 26/255 (10%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC     L  G Q+H  +V  GFDS     N+L+ MYAKCG    +  LF  +P    VS
Sbjct: 436 ACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS 495

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG--- 120
           WN++ +         +A+  F+ M+   I P+  +  ++++ C+ +G    G +      
Sbjct: 496 WNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMS 555

Query: 121 --YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
             Y I  G D        ++D+  + G   +A  + + +   P    W A++AGC +H +
Sbjct: 556 GLYGICPGED----HYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGN 611

Query: 178 NDWAL----KLFQQMKSSE----INPNMFT----YTSALKACAGMELKELGRQLHCSLIK 225
            D  +    +LF+ M   +    +  NM+     +    K    M  K + ++  CS I+
Sbjct: 612 MDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIE 671

Query: 226 MEIKSDPIVGVGLVD 240
           +E K    V V LVD
Sbjct: 672 VENK----VHVFLVD 682



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 33/132 (25%)

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI--PD------ 462
           N  +Y   + VH H+I  GF    +  N L+++Y K   +  A   F EI  PD      
Sbjct: 27  NPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTT 86

Query: 463 -------------------------RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
                                    R  V ++AMI G + +  G  A+++F  +L +G  
Sbjct: 87  LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146

Query: 498 PNHITLVSVLCA 509
           P++ T  SVL A
Sbjct: 147 PDNFTFTSVLGA 158


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/697 (37%), Positives = 421/697 (60%), Gaps = 2/697 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC+  +D  LGLQVH + +  GF++D    ++LV MY+KC    D+ R+F  +PER+
Sbjct: 144 ILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERN 203

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W+++ + YV  D   E +  FK+M+  G+  ++ + +S+  +CAG     LG ++HG
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  +  D     A +DMYAK   + DA  VF  + +P   S+NA+I G    +    
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +FQ ++ + +  +  + + AL AC+ ++    G QLH   +K  +  +  V   ++D
Sbjct: 324 ALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILD 383

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ EA +IF  M  ++ ++WN +I+ H QN   ++  SLF  M R  +  D  T
Sbjct: 384 MYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +V+K+ A  QA+    ++H   +K+    D ++ ++L+D YGKCG + +A KI     
Sbjct: 444 YGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE 503

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V+  S+I+ ++     E A + + +M +  I PD++  +++L+ CAN++  E GKQ
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQ 563

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I+K    SD +  ++LV+MY+KCG++ D+   F + P R  V+WSAMI   A HG 
Sbjct: 564 IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGL 623

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++A+ +F +M    V PNH   +SVL AC H G V +  H+F+ M   +G+ P  EHY+
Sbjct: 624 GEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYS 683

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+LGR+G+  EA++L+++MPF+A+  +W  LL   ++  NVEV + A   L  ++P+
Sbjct: 684 CMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQ 743

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS +VLL+N+YA  GMW  VAK+R  MK+ KLKKEPG SWIEV+D+V+TF VGD++H R
Sbjct: 744 DSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPR 803

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           S+EIY +   + D +  AGYVP  + D    EE E++
Sbjct: 804 SEEIYEQTHLLVDEMKWAGYVP--DIDFMLDEEMEEQ 838



 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/610 (30%), Positives = 325/610 (53%), Gaps = 37/610 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVAN-------------------------- 34
           +L+ C++ K L  G QVH  ++ TGF    +VAN                          
Sbjct: 12  ILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRD 71

Query: 35  -----SLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                +L+  YA  GN   ++ LFD++PER VVSWNSL SCY+H     +++  F  M  
Sbjct: 72  VISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRS 131

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             I  +  + + ++ AC+G  D  LG ++H  +I++G+++D+ + +ALVDMY+K   L+D
Sbjct: 132 LKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDD 191

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF+++   ++V W+AVIAG V ++     LKLF+ M    +  +  TY S  ++CAG
Sbjct: 192 AFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +LG QLH   +K +   D I+G   +DMYAKC  M +A  +F+ +P     ++N +
Sbjct: 252 LSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAI 311

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ +    ++A  +F  + R  +GFD+ +LS  L + +  +      Q+H L+VK   
Sbjct: 312 IVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGL 371

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +  + N+++D YGKCG + +A  IF+E    D V+  ++I A+ Q     + L L++ 
Sbjct: 372 GFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVS 431

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD F   S++ ACA   A   G ++H  IIK G   D F G++LV+MY KCG 
Sbjct: 432 MLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGM 491

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           + +A++  + + ++  VSW+++I G +   + + A + F QMLE G++P++ T  +VL  
Sbjct: 492 LMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDV 551

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQAN 567
           C +   +   K     + K   +Q   + Y  + ++D+  + G  Q++  + +  P + +
Sbjct: 552 CANMATIELGKQIHAQILK---LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRD 607

Query: 568 ASVWGALLGA 577
              W A++ A
Sbjct: 608 YVTWSAMICA 617



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 255/483 (52%), Gaps = 8/483 (1%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH-NDWALKLFQQM 188
           D+ S N L+  YA +GN+  A ++F  +   D+VSWN++++ C LH   N  ++++F +M
Sbjct: 71  DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLS-CYLHNGVNRKSIEIFVRM 129

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +S +I  +  T+   LKAC+G+E   LG Q+HC  I+M  ++D + G  LVDMY+KC  +
Sbjct: 130 RSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKL 189

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D+A  +F  MPE+NL+ W+ VI+G++QN   +E   LF  M + G+G  Q+T ++V +S 
Sbjct: 190 DDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC 249

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A   A  +  Q+H  ++K+ F  D  I  + +D Y KC  + DA K+F         +  
Sbjct: 250 AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYN 309

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           ++I  YA+   G +AL ++  +Q   +  D    S  L AC+ +  + +G Q+H   +K 
Sbjct: 310 AIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKC 369

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           G   +    N++++MY KCG++ +A   F E+  R  VSW+A+I    Q+    + L +F
Sbjct: 370 GLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 489 GQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
             ML   + P+  T  SV+ AC     L    + H   ++   G+       + ++D+ G
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG--SALVDMYG 487

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ-HAAEML-FAIEPEKSSTH 605
           + G   EA ++   +  +   S W +++      K  E  Q + ++ML   I P+  +  
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYA 546

Query: 606 VLL 608
            +L
Sbjct: 547 TVL 549



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 202/428 (47%), Gaps = 56/428 (13%)

Query: 193 INPNM-FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           +NP    T++  L+ C+ ++    G+Q+H  +I         V   L+  Y K   M+ A
Sbjct: 1   MNPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYA 60

Query: 252 RMIFHLMPEKNLIAWNIVISG-------------------------------HLQNGGDM 280
             +F  MP++++I+WN +I G                               +L NG + 
Sbjct: 61  FKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNR 120

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           ++  +F  M    +  D  T + +LK+ +  +  G+  QVH L+++  FE+D    ++L+
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           D Y KC  ++DA ++F+E    +LV  +++I  Y Q     E LKL+ +M    +     
Sbjct: 181 DMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+  +CA LSA++ G Q+H H +K  F  D+  G + ++MYAKC  + DA + F+ +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL 300

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           P+    S++A+I G A+  +G +AL +F  +  + +  + I+L   L AC      +  K
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTAC------SVIK 354

Query: 521 HHFESMEKKFGIQPMQEHYAC-----------MIDILGRAGKFQEAMELVDTMPFQANAS 569
            H E      GIQ       C           ++D+ G+ G   EA  + + M  + +A 
Sbjct: 355 RHLE------GIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAV 407

Query: 570 VWGALLGA 577
            W A++ A
Sbjct: 408 SWNAIIAA 415


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 284/755 (37%), Positives = 444/755 (58%), Gaps = 44/755 (5%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D    N  +  + + G+   +  +F+ +P RS VS+N++ S Y+       A   F +
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M    +      L+  +  C   GD+   R++      L  + D+ S N+L+  YA+ G 
Sbjct: 106 MPERDLFSWNVMLTGYVRNCR-LGDA---RRL----FDLMPEKDVVSWNSLLSGYAQNGY 157

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +++A  VF ++   + +SWN ++A  V +   + A  LF+    S+ + ++ ++   +  
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNCLMGG 213

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
              +  K+LG        KM ++ D I    ++  YA+ G + +AR +F   P +++  W
Sbjct: 214 F--VRKKKLG-DARWLFDKMPVR-DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREG--------VGFDQTTLSTVLKSVASFQAIGVCK 318
             ++SG++QNG   EA + F  M  +          G+ QT    + + +  F+++  C+
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL--FESM-PCR 326

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            + +              N++I  YG+ G +  A K F      D V+  ++I  YAQ G
Sbjct: 327 NISSW-------------NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSG 373

Query: 379 LGEEALKLYLEM-QDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             EEAL +++E+ QD E +N  +F C+  L+ CA+++A E GKQ+H   +K G+ +  F 
Sbjct: 374 HYEEALNMFVEIKQDGESLNRATFGCA--LSTCADIAALELGKQIHGQAVKMGYGTGCFV 431

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           GN+L+ MY KCGSID+A+  F  I ++ +VSW+ M+ G A+HG G++AL +F  M   GV
Sbjct: 432 GNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV 491

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ IT+V VL AC+H GL+     +F SM K +G+ P  +HY CMID+LGRAG+ +EA 
Sbjct: 492 KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ 551

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
           +L+  MPFQ  A+ WGALLGA+RI+ N E+G+ AAEM+F +EP+ S  +VLLSN+YA++G
Sbjct: 552 DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W +  K+R  M+D  ++K PG SW+EV++K++TF+VGD SH   + IYA L+E+   + 
Sbjct: 612 RWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + GYV + +  LHDVEE EKE +L +HSEKLAVAFG++  P G  IRV KNLR+C DCH+
Sbjct: 672 EEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHS 731

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + + ISKIV R II+RD +RFHHF  G CSCG YW
Sbjct: 732 AIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 129/261 (49%), Gaps = 57/261 (21%)

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           + GL+     +F  M +++ + P  +HY CMID+LGR  + +E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALLGA+RI+ N E+G+ AA+M F + P+ S                  ++K    M+D 
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISK----MRDV 857

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            ++K PG SW EV++K++TF+VG    +R +E    L+E+ DL  +        T     
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG-LFLSRERENIGFLEEL-DLKMREREEEKERT----- 910

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRV-KKNLRICVDCHTSFEFISKIVSREII 750
                   L + SE LA A G++  P G   RV KK + +C DC ++ + +SKIV R I 
Sbjct: 911 --------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           +RD    H F    CSCG YW
Sbjct: 963 LRDS---HRFNESICSCGEYW 980



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 45/380 (11%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMF--------TYTSALKAC 207
           ++ PDI+ WN  I+  + + H D AL +F  M + S ++ N           +  A    
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103

Query: 208 AGMELKEL--------GRQLHC------SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             M  ++L        G   +C       L  +  + D +    L+  YA+ G +DEAR 
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  MPEKN I+WN +++ ++ NG   EA  LF         +D  + + ++      + 
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLMGGFVRKKK 219

Query: 314 IGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +G  + +   + V+ A        N++I  Y + G +  A ++F ES   D+   T+M++
Sbjct: 220 LGDARWLFDKMPVRDAIS-----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVS 274

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            Y Q G+ +EA   + EM ++  N  S+         A ++ Y Q K++ +    F  M 
Sbjct: 275 GYVQNGMLDEAKTFFDEMPEK--NEVSY--------NAMIAGYVQTKKMDIARELFESMP 324

Query: 433 --DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             +  + N+++  Y + G I  A + F  +P R  VSW+A+I G AQ G  +EAL MF +
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384

Query: 491 MLEDGVLPNHITLVSVLCAC 510
           + +DG   N  T    L  C
Sbjct: 385 IKQDGESLNRATFGCALSTC 404



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C     L LG Q+HG  V  G+ +  FV N+L+ MY KCG+  ++   F+ I E+ V
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HG 120
           VSWN++ + Y    F  +A+  F+ M  +G++P+E ++  +++AC+ +G  LL R   + 
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG--LLDRGTEYF 518

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           YS+   Y     S +   ++D+  + G LE+A  + +++   P   SW A++    +H +
Sbjct: 519 YSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGN 578

Query: 178 NDWALKLFQQM-KSSEINPNMFTYTSALKACAG 209
            +   K  + + K    N  M+   S L A +G
Sbjct: 579 TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 280/773 (36%), Positives = 444/773 (57%), Gaps = 7/773 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  K D      +H  ++  G   D F  N L+  Y K G   D+  LFD +PER+
Sbjct: 55  MLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS+ +L   Y      ++ V  +  +   G   N    +S +        + +   +H 
Sbjct: 115 NVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHS 170

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +KLGYDS+ F   AL++ Y+  G+++ A +VF+ I   DIV W  +++  V +   + 
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFED 230

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L+L  +M      PN +T+ +ALKA  G+      + +H  ++K   + DP VGVGL+ 
Sbjct: 231 SLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQ 290

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           +Y + G M +A  +F+ MP+ +++ W+ +I+   QNG   +A  +F  M REG V  ++ 
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REGFVVPNEF 349

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS++L   A  +  G+ +Q+H L VK  F+ D Y+ N+LID Y KC  ++ AVK+F E 
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAEL 409

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S+ ++V+  ++I  Y   G G +AL ++ E    +++      SS L ACA+L++ E G 
Sbjct: 410 SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGV 469

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           QVH   IK          NSL++MYAKCG I  A   F+E+    + SW+A+I G + HG
Sbjct: 470 QVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHG 529

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G++AL++F  M      PN +T + VL  C++AGL+ + +  FESM    GI+P  EHY
Sbjct: 530 LGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHY 589

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+ + GR+G+  +AM L++ +P++ +  +W A+L A+    N E  + +AE +  I P
Sbjct: 590 TCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINP 649

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +  +T+VLLSN+YA A  W NVA +R+ MK+  +KKEPG+SWIE +  V+ F+VG   H 
Sbjct: 650 KDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHP 709

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
             K I   L+ ++    +AGYVP     L D+++ EK++ L+ HSE+LA+A+GL+  P  
Sbjct: 710 DMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSS 769

Query: 720 AT-IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              I + KNLRIC DCH++ + IS IV R++++RD+NRFHHF  G CSC  +W
Sbjct: 770 RNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 216/410 (52%), Gaps = 4/410 (0%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           +M+  C    DS+  + IH   +K G   D+F+ N L++ Y K G  +DA+ +F ++   
Sbjct: 54  TMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           + VS+  +  G    +      +L ++    E+NP++F  TS LK    ++  E+   LH
Sbjct: 114 NNVSYVTLTQGYACQDPVGLYSRLHRE--GHELNPHVF--TSFLKLFVSLDKAEICWWLH 169

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             ++K+   S+  VG  L++ Y+ CGS+D AR +F  +  K+++ W  ++S +++NG   
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFE 229

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           ++  L   M  +G   +  T  T LK+     A    K VH   +KT +E D  +   L+
Sbjct: 230 DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLL 289

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y + G + DA K+F E    D+V  + MI  + Q G   +A+ +++ M++  + P+ F
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEF 349

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             SS+LN CA       G+Q+H  ++K GF  D +  N+L+++YAKC  +D A + F+E+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAEL 409

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             + +VSW+ +I G    G G +AL MF + L + V    +T  S L AC
Sbjct: 410 SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC 459



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 38/79 (48%)

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           DS    ++L  C   +     K +H  I+K G   D FA N L+N Y K G   DA   F
Sbjct: 48  DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 458 SEIPDRGIVSWSAMIGGLA 476
            E+P+R  VS+  +  G A
Sbjct: 108 DEMPERNNVSYVTLTQGYA 126


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/785 (35%), Positives = 429/785 (54%), Gaps = 74/785 (9%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           ++ TGF SD F A+ L+  ++    FI    S ++FD I   +   WN++   Y+  +  
Sbjct: 64  MILTGFISDTFAASRLL-KFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSA 122

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           E+A+  +K MV + + P+ ++   ++ ACA       G++IH + +K+G+DSD++  N L
Sbjct: 123 EKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTL 182

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           ++MYA  GN+ DA  +F +    D VSWN+++AG V     + A  +F QM    I    
Sbjct: 183 INMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNI---- 238

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
                                              +    ++ +  K G + EA  +F+ 
Sbjct: 239 -----------------------------------VASNSMIVLLGKMGQVMEAWKLFNE 263

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M EK++++W+ +ISG+ QNG   EA  +F  M   G+  D+  + +VL + A    +   
Sbjct: 264 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 323

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYG-------------------------------KC 346
           K +H L ++   ES   + N+LI  Y                                KC
Sbjct: 324 KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKC 383

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G VE A  +F      D+V+ +++I+ YAQ     E L L+ EMQ  +I PD  +  S++
Sbjct: 384 GSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVI 443

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
           +AC +L+A +QGK VH +I K G   +   G +L++MY KCG +++A   F+ + ++G+ 
Sbjct: 444 SACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS 503

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           SW+A+I GLA +G  + +L MF +M  +GV+PN IT + VL AC H GLV E + HF SM
Sbjct: 504 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 563

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
            +K GI+P  +HY CM+D+LGRAG   EA +L+++MP   + + WGALLGA + + + E+
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 623

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G+     L  ++P+    HVLLSNI+AS G W++V +VR  MK   + K PG S IE   
Sbjct: 624 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 683

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEK 706
            V+ F  GD++H    ++   L+E++  L   GY P       D++E EKE  L+ HSEK
Sbjct: 684 VVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEK 743

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCS 766
           LA+AFGL+   P   IR+ KNLRIC DCHT+ + ISK  +REI+VRD +RFH+F+ G+CS
Sbjct: 744 LAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACS 803

Query: 767 CGGYW 771
           C  YW
Sbjct: 804 CMDYW 808



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 262/533 (49%), Gaps = 74/533 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC  +   F G ++H  V+  GFDSD +V N+L+ MYA CGN  D+R+LFD  P   
Sbjct: 147 VVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLD 206

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS+ + YV    +EEA   F +M      P                          
Sbjct: 207 SVSWNSILAGYVKKGDVEEAKLIFDQM------PQR------------------------ 236

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                    ++ ++N+++ +  K+G + +A  +F +++  D+VSW+A+I+G   +   + 
Sbjct: 237 ---------NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEE 287

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F +M ++ +  +     S L ACA + + + G+ +H  +I+M I+S   +   L+ 
Sbjct: 288 ALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIH 347

Query: 241 MYA-------------------------------KCGSMDEARMIFHLMPEKNLIAWNIV 269
           MY+                               KCGS+++AR +F +MPEK++++W+ V
Sbjct: 348 MYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAV 407

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG+ Q+    E  +LF  M    +  D+T L +V+ +     A+   K VHA   K   
Sbjct: 408 ISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGL 467

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           + +  +  +L+D Y KCG VE+A+++F       + +  ++I   A  GL E +L ++ E
Sbjct: 468 KVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSE 527

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCG 448
           M++  + P+      +L AC ++   ++G+     +I K G   +      +V++  + G
Sbjct: 528 MKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 587

Query: 449 SIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            +++A++    +P    + +W A++G   +HG  +   ++  +++E  + P+H
Sbjct: 588 LLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE--LQPDH 638



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 19/233 (8%)

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI--DDADRAFSEIPDR 463
           L+ C NL   +Q  ++   +I  GF+SDTFA + L+        I  D + + F  I + 
Sbjct: 48  LHNCHNL---KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENS 104

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
               W+ M+    Q    ++AL ++  M+++ V P++ T   V+ AC    L+       
Sbjct: 105 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEI 163

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN 583
                K G          +I++    G  ++A +L D  P   + S W ++L       +
Sbjct: 164 HDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS-WNSILAGYVKKGD 222

Query: 584 VEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           VE     A+++F   P++        NI AS  M   + K+ + M+  KL  E
Sbjct: 223 VE----EAKLIFDQMPQR--------NIVASNSMIVLLGKMGQVMEAWKLFNE 263


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 284/755 (37%), Positives = 444/755 (58%), Gaps = 44/755 (5%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D    N  +  + + G+   +  +F+ +P RS VS+N++ S Y+       A   F +
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M    +      L+  +  C   GD+   R++      L  + D+ S N+L+  YA+ G 
Sbjct: 106 MPERDLFSWNVMLTGYVRNCR-LGDA---RRL----FDLMPEKDVVSWNSLLSGYAQNGY 157

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +++A  VF ++   + +SWN ++A  V +   + A  LF+    S+ + ++ ++   +  
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNCLMGG 213

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
              +  K+LG        KM ++ D I    ++  YA+ G + +AR +F   P +++  W
Sbjct: 214 F--VRKKKLG-DARWLFDKMPVR-DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREG--------VGFDQTTLSTVLKSVASFQAIGVCK 318
             ++SG++QNG   EA + F  M  +          G+ QT    + + +  F+++  C+
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL--FESM-PCR 326

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            + +              N++I  YG+ G +  A K F      D V+  ++I  YAQ G
Sbjct: 327 NISSW-------------NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSG 373

Query: 379 LGEEALKLYLEM-QDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             EEAL +++E+ QD E +N  +F C+  L+ CA+++A E GKQ+H   +K G+ +  F 
Sbjct: 374 HYEEALNMFVEIKQDGESLNRATFGCA--LSTCADIAALELGKQIHGQAVKMGYGTGCFV 431

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           GN+L+ MY KCGSID+A+  F  I ++ +VSW+ M+ G A+HG G++AL +F  M   GV
Sbjct: 432 GNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV 491

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ IT+V VL AC+H GL+     +F SM K +G+ P  +HY CMID+LGRAG+ +EA 
Sbjct: 492 KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ 551

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
           +L+  MPFQ  A+ WGALLGA+RI+ N E+G+ AAEM+F +EP+ S  +VLLSN+YA++G
Sbjct: 552 DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W +  K+R  M+D  ++K PG SW+EV++K++TF+VGD SH   + IYA L+E+   + 
Sbjct: 612 RWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + GYV + +  LHDVEE EKE +L +HSEKLAVAFG++  P G  IRV KNLR+C DCH+
Sbjct: 672 EEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHS 731

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + + ISKIV R II+RD +RFHHF  G CSCG YW
Sbjct: 732 AIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 45/380 (11%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMF--------TYTSALKAC 207
           ++ PDI+ WN  I+  + + H D AL +F  M + S ++ N           +  A    
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103

Query: 208 AGMELKEL--------GRQLHC------SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             M  ++L        G   +C       L  +  + D +    L+  YA+ G +DEAR 
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  MPEKN I+WN +++ ++ NG   EA  LF         +D  + + ++      + 
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLMGGFVRKKK 219

Query: 314 IGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +G  + +   + V+ A        N++I  Y + G +  A ++F ES   D+   T+M++
Sbjct: 220 LGDARWLFDKMPVRDAIS-----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVS 274

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            Y Q G+ +EA   + EM ++  N  S+         A ++ Y Q K++ +    F  M 
Sbjct: 275 GYVQNGMLDEAKTFFDEMPEK--NEVSY--------NAMIAGYVQTKKMDIARELFESMP 324

Query: 433 --DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             +  + N+++  Y + G I  A + F  +P R  VSW+A+I G AQ G  +EAL MF +
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384

Query: 491 MLEDGVLPNHITLVSVLCAC 510
           + +DG   N  T    L  C
Sbjct: 385 IKQDGESLNRATFGCALSTC 404



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C     L LG Q+HG  V  G+ +  FV N+L+ MY KCG+  ++   F+ I E+ V
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HG 120
           VSWN++ + Y    F  +A+  F+ M  +G++P+E ++  +++AC+ +G  LL R   + 
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG--LLDRGTEYF 518

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           YS+   Y     S +   ++D+  + G LE+A  + +++   P   SW A++    +H +
Sbjct: 519 YSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGN 578

Query: 178 NDWALKLFQQM-KSSEINPNMFTYTSALKACAG 209
            +   K  + + K    N  M+   S L A +G
Sbjct: 579 TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/706 (37%), Positives = 405/706 (57%), Gaps = 66/706 (9%)

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           FS N ++  YAK G LE A  VF  I   D VSW  +I G       + A+K+F  M   
Sbjct: 42  FSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD 101

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK------- 244
           ++ P  FT T+ L +CA    + +G+++H  ++K+ + +   V   L++MYAK       
Sbjct: 102 KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMA 161

Query: 245 ------------------------CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
                                   CG +D A   F L+ E+++++WN +I+G  Q+G D 
Sbjct: 162 KVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDN 221

Query: 281 EAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           EA   F  + ++  +  D+ +L++ L + A+ + +   KQ+H   V+T F++   + N+L
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDL---------------------------------VA 366
           I  Y K G VE A +I ++S   DL                                 VA
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVA 341

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T+MI  Y Q GL  +A++++  M      P+SF  +++L+A +++++   GKQ+H   I
Sbjct: 342 WTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAI 401

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHGRGKEAL 485
           + G       GN+L  MYAK GSI+ A + F+ +  +R  VSW++MI  LAQHG G+EA+
Sbjct: 402 RSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAI 461

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           ++F QML  G+ P+HIT V VL AC H GLV + + +F+ M+    I P   HYACM+D+
Sbjct: 462 ELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDL 521

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
            GRAG  QEA + V+ MP + +   WG+LL + ++YKNV++ + AAE L  IEP  S  +
Sbjct: 522 FGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAY 581

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
             L+N+Y+S G WD+ AK+R+ MK   +KKE G+SW+++++K + F V D  H +  EIY
Sbjct: 582 SALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIY 641

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
             +D++   + K G+ P  E+ LHD+E   K+Q+L +HSEKLA+AFG+I+TP   T+R+ 
Sbjct: 642 KMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIM 701

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KNLR+C DCH + +FISK+V REIIVRD  RFHHF++GSCSC  YW
Sbjct: 702 KNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 255/510 (50%), Gaps = 68/510 (13%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  N+++  YAK G    + ++FD IP R  VSW ++   Y      E+A+  F +MV  
Sbjct: 42  FSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD 101

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL--- 147
            + P +F+L++++ +CA +G   +G+K+H + +KLG  + +  AN+L++MYAK G+L   
Sbjct: 102 KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMA 161

Query: 148 ----------------------------EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                                       + A+A F+ +   DIVSWN++IAGC  H  ++
Sbjct: 162 KVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDN 221

Query: 180 WALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            AL+ F   +K + + P+ F+  SAL ACA +E    G+Q+H  +++    +   VG  L
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281

Query: 239 VDMYAKCGSMD---------------------------------EARMIFHLMPEKNLIA 265
           + MYAK G ++                                  AR IF+ + + +++A
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVA 341

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W  +I G++QNG + +A  +F  M  EG   +  TL+ +L + +S  ++   KQ+HA ++
Sbjct: 342 WTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAI 401

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEAL 384
           ++       + N+L   Y K G +  A K+F       D V+ TSMI A AQ GLGEEA+
Sbjct: 402 RSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAI 461

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNM 443
           +L+ +M    I PD      +L+AC +    EQG+     +     +  T +  + +V++
Sbjct: 462 ELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDL 521

Query: 444 YAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
           + + G + +A +    +P +  +++W +++
Sbjct: 522 FGRAGLLQEAYKFVENMPMEPDVIAWGSLL 551



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 249/571 (43%), Gaps = 121/571 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C +     +G +VH  VV  G  +   VANSL+ MYAK G+   ++ +FD +  R+
Sbjct: 113 VLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRN 172

Query: 61  VVSWNSLFSCYVHC-------------------------------DFLEEAVCFFKEMVL 89
             SWN++ S +++C                                F  EA+ FF  ++ 
Sbjct: 173 TSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILK 232

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            + ++P+ FSL+S ++ACA       G++IHGY ++  +D+     NAL+ MYAK G +E
Sbjct: 233 DTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVE 292

Query: 149 --------------DAVA-------------------VFKDIEHPDIVSWNAVIAGCVLH 175
                         D +A                   +F  ++ PD+V+W A+I G V +
Sbjct: 293 IARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQN 352

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             N+ A+++F+ M S    PN FT  + L A + +     G+Q+H S I+      P VG
Sbjct: 353 GLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVG 412

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L  MYAK GS++ AR +F+L+ + ++ ++W  +I    Q+G   EA  LF  M   G+
Sbjct: 413 NALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGI 472

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL +             H   V+      D + N                 
Sbjct: 473 KPDHITYVGVLSAC-----------THGGLVEQGRSYFDLMKN----------------- 504

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           + K    +   AC  M+  + + GL +EA K    +++  + PD     SLL++C     
Sbjct: 505 VHKIDPTLSHYAC--MVDLFGRAGLLQEAYKF---VENMPMEPDVIAWGSLLSSC---KV 556

Query: 415 YEQGKQVHVHIIKFGFMSDTFAG--NSLVNMYAKCGSIDDADRAFSEIPDRGI-----VS 467
           Y+      V   +   +    +G  ++L N+Y+ CG  DDA +    +  RG+     +S
Sbjct: 557 YKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLS 616

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           W  +          +    +FG  +EDG+ P
Sbjct: 617 WVQI----------QNKTHVFG--VEDGLHP 635



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 2/142 (1%)

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           TF+ N++++ YAK G ++ A + F  IP R  VSW+ +I G  Q GR ++A+++F  M++
Sbjct: 41  TFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK 100

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           D VLP   TL +VL +C   G     K    S   K G+         ++++  + G  +
Sbjct: 101 DKVLPTQFTLTNVLASCAATGSRGIGK-KVHSFVVKLGLHACVPVANSLLNMYAKTGDLK 159

Query: 554 EAMELVDTMPFQANASVWGALL 575
            A  + D M  + N S W A++
Sbjct: 160 MAKVVFDRMKLR-NTSSWNAMI 180


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/656 (39%), Positives = 388/656 (59%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + IH   ++LG D D +  N ++      GN   +  +    + P+I  +N +I G VL+
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +    +++++  M+   ++P+ FT+   LKACA +   ELG ++H  ++K   ++D  V 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
           + L+++Y KCG +D A  +F  +P+KN  +W   ISG++  G   EA  +F  +   G+ 
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  +L  VL +      +   + +     +     + ++  +L+D YGKCG++E A  +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      ++V+ +SMI  YA  GL +EAL L+ +M +  + PD +    +L +CA L A 
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGAL 326

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E G      I    F+ ++  G +L++MYAKCG +D A   F  +  +  V W+A I GL
Sbjct: 327 ELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGL 386

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           A  G  K+AL +FGQM + G+ P+  T V +LCAC HAGLV E + +F SME  F + P 
Sbjct: 387 AMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPE 446

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D+LGRAG   EA +L+ +MP +ANA VWGALLG  R++++ ++ +   + L 
Sbjct: 447 IEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLI 506

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           A+EP  S  +VLLSNIYA++  W+  AK+R  M +  +KK PG SWIEV   V+ F VGD
Sbjct: 507 ALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGD 566

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            SH  S++IYAKL E++  L  AGYVP  +  L D+EE EKE  +  HSEKLAVAFGLI+
Sbjct: 567 TSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLIS 626

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T P   I V KNLR+C DCH + + IS+I  REIIVRD NRFH F +G CSC  YW
Sbjct: 627 TAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 223/465 (47%), Gaps = 2/465 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            +H  ++  G D D ++ N ++      GN   S R+ D   E ++  +N++    V  D
Sbjct: 28  HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLND 87

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             +E++  +  M   G+ P+ F+   ++ ACA   DS LG K+H   +K G ++D F   
Sbjct: 88  CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+++Y K G +++A  VF DI   +  SW A I+G V       A+ +F+++    + P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + F+    L AC        G  +   + +  +  +  V   LVD Y KCG+M+ AR +F
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVF 267

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M EKN+++W+ +I G+  NG   EA  LF  M  EG+  D   +  VL S A   A+ 
Sbjct: 268 DGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALE 327

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           +      L     F  +  +  +LID Y KCG ++ A ++F+     D V   + I+  A
Sbjct: 328 LGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDT 434
             G  ++AL L+ +M+   I PD      LL AC +    E+G++    +   F    + 
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                +V++  + G +D+A +    +P +   + W A++GG   H
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 229/467 (49%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC    D  LG+++H +VV  G ++D FV  SL+ +Y KCG   ++ ++FD IP+++
Sbjct: 114 VLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKN 173

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SW +  S YV      EA+  F+ ++  G+RP+ FSL  +++AC  +GD   G  I  
Sbjct: 174 FASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDE 233

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G   ++F A ALVD Y K GN+E A +VF  +   +IVSW+++I G   +     
Sbjct: 234 YITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKE 293

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M +  + P+ +     L +CA +   ELG      +   E   + ++G  L+D
Sbjct: 294 ALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALID 353

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG MD A  +F  M +K+ + WN  ISG   +G   +A  LF  M + G+  D+ T
Sbjct: 354 MYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNT 413

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L           C   HA  V+   E   Y  NS+     +C        +F  + 
Sbjct: 414 FVGLL-----------CACTHAGLVE---EGRRYF-NSM-----EC--------VFTLTP 445

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            ++   C  M+    + G  +EA +L   M    +  ++ V  +LL  C     +   + 
Sbjct: 446 EIEHYGC--MVDLLGRAGCLDEAHQLIKSMP---MEANAIVWGALLGGC---RLHRDTQL 497

Query: 421 VHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           V V + K   +    +GN   L N+YA     ++A +  S + +RG+
Sbjct: 498 VEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGV 544



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 159/319 (49%), Gaps = 10/319 (3%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           + +  F  +   K +HA  ++   + D Y++N ++      G+   + +I  ++   ++ 
Sbjct: 15  RLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIF 74

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
              +MI         +E++++Y  M+   ++PDSF    +L ACA +   E G ++H  +
Sbjct: 75  LFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV 134

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +K G  +D F   SL+N+Y KCG ID+A + F +IPD+   SW+A I G    G+ +EA+
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAI 194

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            MF ++LE G+ P+  +LV VL AC   G +   +   E + +   ++ +    A ++D 
Sbjct: 195 DMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATA-LVDF 253

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
            G+ G  + A  + D M  + N   W +++     Y +  + + A ++ F +  E     
Sbjct: 254 YGKCGNMERARSVFDGM-LEKNIVSWSSMIQG---YASNGLPKEALDLFFKMLNEG---- 305

Query: 606 VLLSNIYASAGMWDNVAKV 624
            L  + YA  G+  + A++
Sbjct: 306 -LKPDCYAMVGVLCSCARL 323


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/579 (42%), Positives = 382/579 (65%), Gaps = 2/579 (0%)

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + P    Y+  L  C  +   + GR +H  +     + D ++   +++MYAKCGS++EA+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP K++++W ++ISG+ Q+G   EA +LFP M   G   ++ TLS++LK+  +  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +    +Q+HA S+K  ++ + ++ +SL+D Y +  H+ +A  IF   +A ++V+  ++I 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            +A+ G GE  ++L+ +M  +   P  F  SS+L ACA+  + EQGK VH H+IK G   
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
             + GN+L++MYAK GSI DA + F  +  + IVSW+++I G AQHG G EALQ+F QML
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           +  V PN IT +SVL AC+H+GL+ E +++FE M KK  I+    H+  ++D+LGRAG+ 
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRL 458

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            EA + ++ MP +  A+VWGALLGA R++KN+++G +AAE +F ++P  S  HVLLSNIY
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 518

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           ASAG   + AKVR+ MK++ +KKEP  SW+E++++V+ F   D SH   +EI    +++S
Sbjct: 519 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 578

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             + + GYVP     L  + + ++E  L +HSEKLA+AF ++ TPPG TIR+KKN+RIC 
Sbjct: 579 GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 638

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH++F+F S+++ REIIVRD NRFHHF +G CSC  YW
Sbjct: 639 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 225/465 (48%), Gaps = 36/465 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  CT  + L  G  +H  +  + F+ D  + N ++ MYAKCG+  +++ LFD +P + 
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  L S Y       EA+  F +M+  G +PNEF+LSS++ A         GR++H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +S+K GYD ++   ++L+DMYA+  ++ +A  +F  +   ++VSWNA+IAG       + 
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            ++LF QM      P  FTY+S L ACA     E G+ +H  +IK   +    +G  L+D
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+ +A+ +F  + ++++++WN +ISG+ Q+G   EA  LF  M +  V  ++ T
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +    +   +    L  K   E+      +++D  G+ G + +A K  +E  
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 469

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                                             I P + V  +LL AC      + G  
Sbjct: 470 ----------------------------------IKPTAAVWGALLGACRMHKNMDLGVY 495

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               I +     D+     L N+YA  G + DA +    + + G+
Sbjct: 496 AAEQIFELD-PHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 539



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 203/388 (52%), Gaps = 2/388 (0%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P     S M+N C        GR IH +     ++ D+   N +++MYAK G+LE+A 
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F  +   D+VSW  +I+G         AL LF +M      PN FT +S LKA     
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
               GRQLH   +K     +  VG  L+DMYA+   M EA++IF+ +  KN+++WN +I+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           GH + G       LF  M R+G      T S+VL + AS  ++   K VHA  +K+  + 
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             YI N+LID Y K G ++DA K+F+     D+V+  S+I+ YAQ GLG EAL+L+ +M 
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             ++ P+     S+L AC++    ++G+     + K    +      ++V++  + G ++
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 459

Query: 452 DADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           +A++   E+P +   + W A++G    H
Sbjct: 460 EANKFIEEMPIKPTAAVWGALLGACRMH 487


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/680 (37%), Positives = 404/680 (59%), Gaps = 23/680 (3%)

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH---------- 159
           GD   GR+I         +  +F  N L++ YAK+GN  +++++FK +            
Sbjct: 150 GDLREGRRIFDKVA----NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESAR 205

Query: 160 --------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
                    D++SWN++I+G V +  ++  L LF+QM    IN ++ T  S +  C+   
Sbjct: 206 KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTG 265

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
           +  LGR LH   IK     +  +   L+DMY+K G+++ A  +F  M E+++++W  +I+
Sbjct: 266 MLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 325

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ + G    +  LF  M +EG+  D  T++T+L + A    +   K VH    +   +S
Sbjct: 326 GYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQS 385

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           D ++ N+L+D Y KCG + DA  +F E    D+V+  +MI  Y++  L  EAL L++EMQ
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ 445

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
                P+S   + +L ACA+L+A E+G+++H HI++ GF  D    N+LV+MY KCG++ 
Sbjct: 446 YNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F  IP++ +VSW+ MI G   HG G EA+  F +M   G+ P+ ++ +S+L AC+
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           H+GL+ E    F  M     I+P  EHYAC++D+L RAG   +A + +  MP + +A++W
Sbjct: 565 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 624

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL   RIY +V++ +  AE +F +EPE +  +VLL+NIYA A  W+ V K+R  +   
Sbjct: 625 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L+K PG SWIE+K KV+ F  GD SH  + +I   L +    + + G+ P +   L   
Sbjct: 685 GLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 744

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +++EKE  L  HSEK+A+AFG+++ PPG T+RV KNLR+C DCH   +F+SK+V R+II+
Sbjct: 745 DDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIIL 804

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD NRFHHF++GSCSC G+W
Sbjct: 805 RDSNRFHHFKDGSCSCRGHW 824



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 171/550 (31%), Positives = 279/550 (50%), Gaps = 62/550 (11%)

Query: 31  FVANSLVVMYAKCGNFIDS------------------RRLFDAIPERSVVSWNSLFSCYV 72
           F+ N L+  YAK GNF +S                  R+LFD + +R V+SWNS+ S YV
Sbjct: 168 FLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYV 227

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                E+ +  F++M+L GI  +  ++ S++  C+ +G  LLGR +HGY+IK  +  ++ 
Sbjct: 228 SNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELT 287

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N L+DMY+K GNL  A+ VF+ +    +VSW ++IAG      +D +++LF +M+   
Sbjct: 288 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG 347

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I+P++FT T+ L ACA   L E G+ +H  + + +++SD  V   L+DMYAKCGSM +A 
Sbjct: 348 ISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  M  K++++WN +I G+ +N    EA +LF  M       +  T++ +L + AS  
Sbjct: 408 SVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKP-NSITMACILPACASLA 466

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+   +++H   ++  F  D ++ N+L+D Y KCG +  A  +F      DLV+ T MI 
Sbjct: 467 ALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIA 526

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            Y   G G EA+  + EM++  I PD     S+L AC++    ++G         +GF  
Sbjct: 527 GYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG---------WGFF- 576

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
                    NM      I+     ++ I D            LA+ G   +A +    M 
Sbjct: 577 ---------NMMRNNCCIEPKSEHYACIVDL-----------LARAGNLSKAYKFIKMM- 615

Query: 493 EDGVLPNHITLVSVLCACN--HAGLVAE--AKHHFESMEKKFGIQPMQEHYACMIDILGR 548
              + P+     ++LC C   H   +AE  A+H FE   +  G      +Y  + +I   
Sbjct: 616 --PIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTG------YYVLLANIYAE 667

Query: 549 AGKFQEAMEL 558
           A K++E  +L
Sbjct: 668 AEKWEEVKKL 677



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 179/305 (58%), Gaps = 1/305 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C++   L LG  +HG  +   F  +  + N L+ MY+K GN   + ++F+ + ERS
Sbjct: 257 VVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS 316

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ + Y      + +V  F EM   GI P+ F+++++++ACA +G    G+ +H 
Sbjct: 317 VVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHN 376

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +    SD+F +NAL+DMYAK G++ DA +VF +++  DIVSWN +I G   +   + 
Sbjct: 377 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNE 436

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M+ +   PN  T    L ACA +   E G+++H  +++     D  V   LVD
Sbjct: 437 ALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 495

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++  AR++F ++PEK+L++W ++I+G+  +G   EA + F  M   G+  D+ +
Sbjct: 496 MYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVS 555

Query: 301 LSTVL 305
             ++L
Sbjct: 556 FISIL 560



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 245/506 (48%), Gaps = 65/506 (12%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  Q  S + +  + TY S L+ CA ++  + GR++H  +   +++ D ++G  LV 
Sbjct: 87  AMELINQ--SPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVF 144

Query: 241 MYAKCGSMDE-------------------------------------------------A 251
           MY  CG + E                                                 A
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           R +F  + ++++I+WN +ISG++ NG   +   LF  M   G+  D  T+ +V+   ++ 
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNT 264

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
             + + + +H  ++K +F  +  + N L+D Y K G++  A+++F+      +V+ TSMI
Sbjct: 265 GMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 324

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
             YA+ GL + +++L+ EM+   I+PD F  +++L+ACA     E GK VH +I +    
Sbjct: 325 AGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQ 384

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           SD F  N+L++MYAKCGS+ DA   FSE+  + IVSW+ MIGG +++    EAL +F +M
Sbjct: 385 SDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM 444

Query: 492 LEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYA-CMIDILGRA 549
             +   PN IT+  +L AC + A L    + H   +   F    +  H A  ++D+  + 
Sbjct: 445 QYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFS---LDRHVANALVDMYLKC 500

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARI--YKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           G    A  L D +P + +   W  ++    +  Y +  +          IEP++ S    
Sbjct: 501 GALGLARLLFDMIP-EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVS---F 556

Query: 608 LSNIYAS--AGMWDNVAKVRRFMKDN 631
           +S +YA   +G+ D        M++N
Sbjct: 557 ISILYACSHSGLLDEGWGFFNMMRNN 582



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 10/181 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S   L  G ++HG ++  GF  D  VAN+LV MY KCG    +R LFD IPE+ 
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + + Y    +  EA+  F EM  SGI P+E S  S++ AC+ SG  LL      
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSG--LLDEGWGF 575

Query: 121 YSIK-----LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
           +++      +   S+ ++   +VD+ A+ GNL  A    K +   PD   W A++ GC +
Sbjct: 576 FNMMRNNCCIEPKSEHYA--CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 633

Query: 175 H 175
           +
Sbjct: 634 Y 634


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/782 (36%), Positives = 445/782 (56%), Gaps = 15/782 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK--CGNFIDSRRLFDAIPE 58
           +L++CT+   +     VH  +      +  F+ NSL+  Y +   G  + + RL D +P 
Sbjct: 8   LLRSCTALPHV---AAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR 64

Query: 59  RSVVSWNSLFSCYVHCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           R+ VS+N L S Y        A+  F +    +G+R + F+ ++ + AC+ + D   G+ 
Sbjct: 65  RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKA 124

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H  ++  G  + +F +N+L  MYA  G + +A  VF   E  D VSWN++++G V    
Sbjct: 125 VHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGA 184

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACA-GMEL-KELGRQLHCSLIKMEIKSDPIVG 235
            +  LK+F  M    +  N F   S +K CA G ++ + +   +H  ++K  + +D  + 
Sbjct: 185 REETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLA 244

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM------EAASLFPWM 289
             ++DMYAK G++  A  +F  +P+ N+I +N +I+G  ++   +      EA SL+  M
Sbjct: 245 SAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEM 304

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
              G+   + T S++L++       G  KQ+H   +K +F  DDYI ++LID Y   G +
Sbjct: 305 QSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCM 364

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           ED  + F+     D+V  TSMI+   Q  L E+AL+L+ E     + PD F  SS++NAC
Sbjct: 365 EDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNAC 424

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           A+L+    G+Q+    IK+GF   T  GNS ++M A+ G +D   R F E+  R +VSWS
Sbjct: 425 ASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWS 484

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           A+I   AQHG  ++AL++F +M+   V PN +T ++VL AC+H GLV +   ++E M+ +
Sbjct: 485 AVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNE 544

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           +G+ P  +H  C++D+LGRAG+  +A   +    F  +A VW +LL + RI+ ++E GQ 
Sbjct: 545 YGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQL 604

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
            A+ +  +EP  S+++V+L N+Y  AG     +K R  MK+  +KKEPG+SWIE++  V+
Sbjct: 605 VADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVH 664

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
           +F  GD+SH  S  IY KL E+   + K        T    +  SE + L+  HSEK+AV
Sbjct: 665 SFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSE-QNLVGCHSEKIAV 723

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AFG+I  P  A IRV KNLR+C DCH++ + IS   +REII+RD  RFHHFR GSCSCG 
Sbjct: 724 AFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGD 783

Query: 770 YW 771
           YW
Sbjct: 784 YW 785


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/696 (37%), Positives = 424/696 (60%), Gaps = 1/696 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+  +D  LGLQVH + +  GF++D    ++LV MY+KC     + R+F  +PER+
Sbjct: 144 VLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERN 203

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W+++ + YV  D   E +  FK+M+  G+  ++ + +S+  +CAG     LG ++HG
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  +  D     A +DMYAK   + DA  VF  + +P   S+NA+I G    +    
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++FQ ++ + ++ +  + + AL AC+ ++    G QLH   +K  +  +  V   ++D
Sbjct: 324 ALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILD 383

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ EA  IF  M  ++ ++WN +I+ H QN   ++  SLF  M R  +  D  T
Sbjct: 384 MYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +V+K+ A  QA+    ++H   VK+    D ++ ++L+D YGKCG + +A KI     
Sbjct: 444 YGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE 503

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V+  S+I+ ++     E A + + +M +  + PD+F  +++L+ CAN++  E GKQ
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQ 563

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I+K    SD +  ++LV+MY+KCG++ D+   F + P R  V+WSAMI   A HG 
Sbjct: 564 IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGH 623

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++A+++F +M    V PNH   +SVL AC H G V +  H+F+ M+  +G+ P  EHY+
Sbjct: 624 GEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYS 683

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+LGR+ +  EA++L+++M F+A+  +W  LL   ++  NVEV + A   L  ++P+
Sbjct: 684 CMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQ 743

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS +VLL+N+YA+ GMW  VAK+R  MK+ KLKKEPG SWIEV+D+V+TF VGD++H R
Sbjct: 744 DSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPR 803

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL-HDVEESE 695
           S+EIY +   + D +  AGYVP +++ L  +VEE +
Sbjct: 804 SEEIYEQTHLLVDEMKWAGYVPDIDSMLDEEVEEQD 839



 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/608 (29%), Positives = 315/608 (51%), Gaps = 33/608 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMY-------------------- 40
           +L+ C++ K L  G Q H  ++ T F    +VAN LV  Y                    
Sbjct: 12  ILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRD 71

Query: 41  -----------AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                      A+ GN   ++ LFD +PER VVSWNSL SCY+H     +++  F  M  
Sbjct: 72  VISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRS 131

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             I  +  + S ++ AC+G  D  LG ++H  +I++G+++D+ + +ALVDMY+K   L+ 
Sbjct: 132 LKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDG 191

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+++   ++V W+AVIAG V ++     LKLF+ M    +  +  TY S  ++CAG
Sbjct: 192 AFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +LG QLH   +K +   D I+G   +DMYAKC  M +A  +F+ +P     ++N +
Sbjct: 252 LSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAI 311

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ +    ++A  +F  + R  + FD+ +LS  L + +  +      Q+H L+VK   
Sbjct: 312 IVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGL 371

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +  + N+++D YGKCG + +A  IF +    D V+  ++I A+ Q     + L L++ 
Sbjct: 372 GFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVS 431

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD F   S++ ACA   A   G ++H  I+K G   D F G++LV+MY KCG 
Sbjct: 432 MLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGM 491

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           + +A++    + ++  VSW+++I G +   + + A + F QMLE GV+P++ T  +VL  
Sbjct: 492 LMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDV 551

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C +   + E      +   K  +       + ++D+  + G  Q++  + +  P + +  
Sbjct: 552 CANMATI-ELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYV 609

Query: 570 VWGALLGA 577
            W A++ A
Sbjct: 610 TWSAMICA 617



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 263/532 (49%), Gaps = 36/532 (6%)

Query: 96  EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           +F+ S ++  C+       G++ H   I   +   ++ AN LV  Y K  N+  A  VF 
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 156 DIEHPDIVSWNAVIAG------------------------------CVLHEH-NDWALKL 184
            + H D++SWN +I G                              C LH   N  ++++
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F +M+S +I  +  T++  LKAC+G+E   LG Q+HC  I+M  ++D + G  LVDMY+K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           C  +D A  IF  MPE+NL+ W+ VI+G++QN   +E   LF  M + G+G  Q+T ++V
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            +S A   A  +  Q+H  ++K+ F  D  I  + +D Y KC  + DA K+F        
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            +  ++I  YA+   G +AL+++  +Q   ++ D    S  L AC+ +  + +G Q+H  
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
            +K G   +    N++++MY KCG++ +A   F ++  R  VSW+A+I    Q+    + 
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           L +F  ML   + P+  T  SV+ AC     L    + H   ++   G+       + ++
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG--SALV 483

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ-HAAEML 594
           D+ G+ G   EA ++ D +  +   S W +++      K  E  Q + ++ML
Sbjct: 484 DMYGKCGMLMEAEKIHDRLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQML 534



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 201/428 (46%), Gaps = 56/428 (13%)

Query: 193 INPNM-FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           +NP   FT++  L+ C+ ++    G+Q H  +I         V   LV  Y K  +M+ A
Sbjct: 1   MNPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYA 60

Query: 252 RMIFHLMPEKNLIAWNIVISG-------------------------------HLQNGGDM 280
             +F  MP +++I+WN +I G                               +L NG + 
Sbjct: 61  FKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNR 120

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           ++  +F  M    +  D  T S VLK+ +  +  G+  QVH L+++  FE+D    ++L+
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           D Y KC  ++ A +IF+E    +LV  +++I  Y Q     E LKL+ +M    +     
Sbjct: 181 DMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+  +CA LSA++ G Q+H H +K  F  D+  G + ++MYAKC  + DA + F+ +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTL 300

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           P+    S++A+I G A+  +G +AL++F  +    +  + I+L   L AC      +  K
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTAC------SVIK 354

Query: 521 HHFESMEKKFGIQPMQEHYAC-----------MIDILGRAGKFQEAMELVDTMPFQANAS 569
            H E      GIQ       C           ++D+ G+ G   EA  + D M  + +A 
Sbjct: 355 GHLE------GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAV 407

Query: 570 VWGALLGA 577
            W A++ A
Sbjct: 408 SWNAIIAA 415


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/572 (42%), Positives = 377/572 (65%), Gaps = 3/572 (0%)

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           + LK C  +     G+ +H  L+    + D ++   L+++YAKCG +  AR +F  M  +
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC--KQ 319
           +++ W  +I+G+ Q+    +A  L P M R G+  +Q TL+++LK+ +   +  V   +Q
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H L ++  ++S+ Y+  +++D Y +C H+E+A  IF    + + V+  ++I  YA+ G 
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G++A  L+  M    + P  F  SS+L ACA++ + EQGK VH  +IK+G     F GN+
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAK GSI+DA + F  +  R +VSW++M+ G +QHG GK ALQ F +ML   + PN
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT + VL AC+HAGL+ E +H+F+ M KK+ ++P   HY  M+D+LGRAG    A++ +
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             MP +  A+VWGALLGA R++KN+E+G +AAE +F ++     THVLL NIYA AG W+
Sbjct: 379 SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           + AKVR+ MK++ +KKEP  SW+E++++V+ F   D +H + +EI+   +++SD + + G
Sbjct: 439 DAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIG 498

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           YVP     L  +++ E+E  L +HSEKLA+AF L+ TPPG+TIR+KKN+RIC DCH++F+
Sbjct: 499 YVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFK 558

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+SK+V REIIVRD NRFHHF +G+CSC  YW
Sbjct: 559 FVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 204/360 (56%), Gaps = 2/360 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK CT    L  G  +H +++ + F  D  + N+L+ +YAKCG+ + +R+LFD +  R 
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG--DSLLGRKI 118
           VV+W +L + Y   D  ++A+    EM+  G++PN+F+L+S++ A +G G  D L GR++
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  ++ GYDS+++ + A++DMYA+  +LE+A  +F  +   + VSWNA+IAG       
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D A  LF  M    + P  FTY+S L ACA M   E G+ +H  +IK   K    VG  L
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAK GS+++A+ +F  + ++++++WN +++G+ Q+G    A   F  M R  +  + 
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL + +    +   +    +  K   E       +++D  G+ GH++ A++   E
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISE 380



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 1/262 (0%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           D+  G Q+HG+ +  G+DS+ +V+ +++ MYA+C +  +++ +FD +  ++ VSWN+L +
Sbjct: 133 DVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIA 192

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            Y      ++A C F  M+   ++P  F+ SS++ ACA  G    G+ +H   IK G   
Sbjct: 193 GYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKL 252

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
             F  N L+DMYAK G++EDA  VF  +   D+VSWN+++ G   H     AL+ F++M 
Sbjct: 253 VAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEML 312

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
            + I PN  T+   L AC+   L + GR     + K  ++      V +VD+  + G +D
Sbjct: 313 RTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLD 372

Query: 250 EARMIFHLMPEKNLIA-WNIVI 270
            A      MP K   A W  ++
Sbjct: 373 RAIQFISEMPIKPTAAVWGALL 394



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 3/181 (1%)

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
           +C +LL  C +L+   +GK +H  ++   F  D    N+L+N+YAKCG +  A + F E+
Sbjct: 17  ICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEM 76

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R +V+W+A+I G +QH R ++AL +  +ML  G+ PN  TL S+L A +  G     +
Sbjct: 77  SSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ 136

Query: 521 -HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAA 578
                 +  ++G          ++D+  R    +EA  + D M    N   W AL+ G A
Sbjct: 137 GRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM-VSKNEVSWNALIAGYA 195

Query: 579 R 579
           R
Sbjct: 196 R 196


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 285/839 (33%), Positives = 461/839 (54%), Gaps = 74/839 (8%)

Query: 2    LKACTSKKDLFLGLQVHGIVVFTGFDSDEF--VANSLVVMYAKCGNFIDSRRLFDAIPER 59
            L+    KKDLF         + TG+  +    + N+L+ MYAK G   D++R FD + E+
Sbjct: 250  LRKGMLKKDLF-----SSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEK 304

Query: 60   SVVSWNSL---------------------------------FSCYVHCDFLEEAVCFFKE 86
            +V+SW SL                                  S YV     EEAV  F +
Sbjct: 305  NVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 364

Query: 87   MVLSGIRPNEFSLSSMINACAGSGD-SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M   G+ PN F ++S+I AC+ SG  +  G ++HG+ +K G   D++   ALV  Y  +G
Sbjct: 365  MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 424

Query: 146  NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
             + +A  +F+++   ++VSW +++ G     +    L ++Q+M+   ++ N  T+ +   
Sbjct: 425  LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTS 484

Query: 206  ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
            +C  +E + LG Q+   +I+   +    V   L+ M++   S++EA  +F  M E ++I+
Sbjct: 485  SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 544

Query: 266  WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
            WN +IS +  +G   E+   F WM       + TTLS++L   +S   +   + +H L V
Sbjct: 545  WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 604

Query: 326  KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            K   +S+  I N+L+  Y + G  EDA  +F+  +  DL++  SM+  Y Q G   + LK
Sbjct: 605  KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 664

Query: 386  LYLEM-------------------QDREIN--------------PDSFVCSSLLNACANL 412
            +  E+                   ++ E N              P +++    L A ANL
Sbjct: 665  ILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANL 724

Query: 413  SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            +  E+G+Q+H  +IK GF SD    N+ ++MY KCG + D  +   +  +R  +SW+ +I
Sbjct: 725  AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 784

Query: 473  GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
               A+HG  ++A + F +ML+ G  P+H+T VS+L ACNH GLV E   +++SM ++FG+
Sbjct: 785  SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 844

Query: 533  QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
             P  EH  C+ID+LGR+G+   A   +  MP   N   W +LL A RI+ N+E+ +  AE
Sbjct: 845  FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAE 904

Query: 593  MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
             L  ++P   S +VL SN+ A++G W++V  +R+ M  N +KK+P  SW+++KDKV++F 
Sbjct: 905  HLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG 964

Query: 653  VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            +G++ H ++  I AKL E+  +  +AGYVP     LHD++E +KE  L++HSE+LA+AFG
Sbjct: 965  MGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFG 1024

Query: 713  LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            LI TP  +T+R+ KNLR+C DCH+ ++F+S IV R+I++RD  RFHHF  G CSCG YW
Sbjct: 1025 LINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 169/659 (25%), Positives = 296/659 (44%), Gaps = 118/659 (17%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           ++LV  ++KCG   D+  LF  + ER VVSWN++   Y    F +++ C F+ M+  G+ 
Sbjct: 131 HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 190

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS------------------------ 129
           P+ ++L S++ A A  G  ++  +IHG   +LGY S                        
Sbjct: 191 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDL 250

Query: 130 -------DMFSA----------------NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN 166
                  D+FS+                NAL+DMYAK G +EDA   F ++E  +++SW 
Sbjct: 251 RKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 310

Query: 167 AVIAGCVLHEHN------------------DW---------------ALKLFQQMKSSEI 193
           ++I+G   H +                    W               A+ LF QM    +
Sbjct: 311 SLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 370

Query: 194 NPNMFTYTSALKACA-GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
            PN F   S + AC+    + + G Q+H  ++K  I  D  VG  LV  Y   G +  A+
Sbjct: 371 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 430

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP+ N+++W  ++ G+  +G   E  +++  M +EGV  +Q T +TV  S    +
Sbjct: 431 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE 490

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
              +  QV    ++  FE    + NSLI  +     VE+A  +F   +  D+++  +MI+
Sbjct: 491 DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 550

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AYA  GL  E+L+ +  M+      +S   SSLL+ C+++   + G+ +H  ++K G  S
Sbjct: 551 AYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDS 610

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM--------------------- 471
           +    N+L+ +Y++ G  +DA+  F  + +R ++SW++M                     
Sbjct: 611 NVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELL 670

Query: 472 -------------IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
                        IGG A++    EA++ +  + E G+  N+IT+VS+    N A  V E
Sbjct: 671 QMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLA--VLE 728

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                  +  K G +         +D+ G+ G+  + ++++   P   +   W  L+ A
Sbjct: 729 EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISA 786



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 246/574 (42%), Gaps = 124/574 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  KK    G  +H  ++  GF SD  +   L++ Y K G+ I +R +FD +PERS
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y      E+A   F +M   G++ N                         
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN------------------------- 130

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                         +ALVD ++K G +EDA  +F  +   D+VSWNA+I G  +    D 
Sbjct: 131 --------------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 176

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV------ 234
           +  +F+ M    + P+ +T  S L+A A      +  Q+H  + ++   S  IV      
Sbjct: 177 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 236

Query: 235 -----------------------------------------GVGLVDMYAKCGSMDEARM 253
                                                    G  L+DMYAK G +++A+ 
Sbjct: 237 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKR 296

Query: 254 IFHLMPEKNLIAWNIVISGHLQNG-GDM-------------------------------- 280
            F  M EKN+I+W  +ISG+ ++G G M                                
Sbjct: 297 AFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYE 356

Query: 281 EAASLFPWMYREGV---GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           EA  LF  M+  GV   GF   +L T           G   QVH   VKT    D Y+  
Sbjct: 357 EAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF--QVHGFVVKTGILGDVYVGT 414

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+  YG  G V +A K+F+E    ++V+ TS++  Y+  G   E L +Y  M+   ++ 
Sbjct: 415 ALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG 474

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           +    +++ ++C  L     G QV  HII++GF       NSL++M++   S+++A   F
Sbjct: 475 NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 534

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
             + +  I+SW+AMI   A HG  +E+L+ F  M
Sbjct: 535 DHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 568



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 131/547 (23%), Positives = 234/547 (42%), Gaps = 128/547 (23%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G  IH + I  G+ SD+     L+  Y KVG++  A  VF  +    +VSW A+++G   
Sbjct: 49  GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +   + A  LF  M+                              HC      +K++   
Sbjct: 109 NGRFEKAFVLFSDMR------------------------------HCG-----VKANH-- 131

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              LVD ++KCG M++A  +F  M E+++++WN +I G+   G   ++  +F  M R G+
Sbjct: 132 --ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV------------------ 336
             D  TL +VL++ A    + +  Q+H +  +  + S D +                   
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249

Query: 337 -----------------------------NSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
                                        N+LID Y K G +EDA + F E    ++++ 
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 309

Query: 368 TSMITAYAQFGLG---------------------------------EEALKLYLEMQDRE 394
           TS+I+ YA+ G G                                 EEA+ L+ +M    
Sbjct: 310 TSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 369

Query: 395 INPDSFVCSSLLNACANLSAY--EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           + P+ F+ +SL+ AC+  S Y  ++G QVH  ++K G + D + G +LV+ Y   G + +
Sbjct: 370 VEPNGFMVASLITACSR-SGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 428

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A + F E+PD  +VSW++++ G +  G   E L ++ +M ++GV  N  T  +V  +C  
Sbjct: 429 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC-- 486

Query: 513 AGLVAEAKHHFESMEK--KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
            GL+ +    ++ +    ++G +        +I +       +EA  + D M  + +   
Sbjct: 487 -GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIIS 544

Query: 571 WGALLGA 577
           W A++ A
Sbjct: 545 WNAMISA 551



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 189/475 (39%), Gaps = 123/475 (25%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKL      + ++P++  Y   L+ C   + K+ G  +H  LI     SD  +   L+ 
Sbjct: 17  ALKLLSS-NPTRLDPSL--YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLII 73

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y K G +  AR +F  MPE+++++W  ++SG+ QNG   +A  LF  M   GV      
Sbjct: 74  FYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGV------ 127

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
                            K  HA                L+D + KCG +EDA  +F    
Sbjct: 128 -----------------KANHA----------------LVDFHSKCGKMEDASYLFGTMM 154

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+  +MI  YA  G  +++  ++  M    + PD +   S+L A A         Q
Sbjct: 155 ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQ 214

Query: 421 VHVHIIKFGFMS-------------------------------DTFA------------- 436
           +H  I + G+ S                               D F+             
Sbjct: 215 IHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 274

Query: 437 ---GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG------------ 481
              GN+L++MYAK G I+DA RAF E+ ++ ++SW+++I G A+HG G            
Sbjct: 275 YTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEM 334

Query: 482 ---------------------KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
                                +EA+ +F QM   GV PN   + S++ AC+ +G +A+  
Sbjct: 335 RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEG 394

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                   K GI         ++   G  G    A +L + MP   N   W +L+
Sbjct: 395 FQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 448



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 220/502 (43%), Gaps = 75/502 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  +C   +D  LG QV G ++  GF+    VANSL+ M++   +  ++  +FD + E  
Sbjct: 482 VTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECD 541

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++ S Y H     E++  F  M       N  +LSS+++ C+   +   GR IHG
Sbjct: 542 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 601

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH--------------------- 159
             +KLG DS++   N L+ +Y++ G  EDA  VF+ +                       
Sbjct: 602 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 661

Query: 160 -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                        PD V+WNA+I G   +E  + A+K ++ ++   I  N  T  S L A
Sbjct: 662 GLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAA 720

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE---KNL 263
            A + + E G+QLH  +IK+  +SD  V    +DMY KCG M +   +  ++P+   ++ 
Sbjct: 721 TANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHD---VLKMLPQPINRSR 777

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WNI+IS   ++G   +A   F  M + G   D  T  ++L +         C     +
Sbjct: 778 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSA---------CNHGGLV 828

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
               A+       +S+   +G    +E  V I      +DL+  +  ++    F      
Sbjct: 829 DEGLAY------YDSMTREFGVFPGIEHCVCI------IDLLGRSGRLSHAEGF------ 870

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
                 +++  + P+     SLL AC      E  ++   H+++    SD  A     N+
Sbjct: 871 ------IKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELD-PSDDSAYVLYSNV 923

Query: 444 YAKCGSIDDADRAFSEIPDRGI 465
            A  G  +D +    E+    I
Sbjct: 924 CATSGKWEDVENLRKEMGSNNI 945



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 38/317 (11%)

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           S I +    G   EALKL L      ++P  ++   +L  C +  A +QG  +H H+I  
Sbjct: 3   SKIQSACNLGRLAEALKL-LSSNPTRLDPSLYL--KILQLCIDKKAKKQGHLIHTHLITN 59

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           GF SD      L+  Y K G +  A   F  +P+R +VSW+AM+ G +Q+GR ++A  +F
Sbjct: 60  GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK-----------FGIQPMQE 537
             M   GV  NH  LV     C   G + +A + F +M ++           + +Q   +
Sbjct: 120 SDMRHCGVKANH-ALVDFHSKC---GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 175

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV-EVGQHAAEMLFA 596
              CM   + R G   +   L   +   A     G L+ A +I+  + ++G  + +++  
Sbjct: 176 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEG---GGLIIANQIHGIITQLGYGSYDIVTG 232

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
                     LL N YA  G   +   +R+ M    L     +      + +YT      
Sbjct: 233 ----------LLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMG---- 278

Query: 657 SHARSKEIYAKLDEVSD 673
                 ++YAK  E+ D
Sbjct: 279 --NALIDMYAKSGEIED 293


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 297/849 (34%), Positives = 452/849 (53%), Gaps = 99/849 (11%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL--------- 52
           L++C S+  L     +HG +V  G  S  F+ N+L+  Y  CG   D+RRL         
Sbjct: 27  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86

Query: 53  -----------------------FDAIPERSVVSWNSLFS-------CYVHCDFL----- 77
                                  FD +P R V SWN+L S        ++ C  L     
Sbjct: 87  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146

Query: 78  -EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD--SLLGRKIHGYSIKLGYDSDMFSA 134
             + +  F +    G    E +L  M   C G  D  S L  +I   +I        F  
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRC-GYVDFASRLFSQIERPTI--------FCR 197

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           N+++  YAK+  ++ A+  F+D+   D+VSWN +IA          AL L  +M    + 
Sbjct: 198 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 257

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
            +  TYTS+L ACA +     G+QLH  +I+   + DP V   L+++YAKCGS  EA+ +
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F+ + ++N ++W ++I G LQ     ++  LF  M  E +  DQ  L+T++    +   +
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            + +Q+H+L +K+       + NSLI  Y KCG +++A  +F   S  D+V+ TSMITAY
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437

Query: 375 AQFG-----------------------LG--------EEALKLYLEM-QDREINPDSFVC 402
           +Q G                       LG        E+ LK+Y  M   +++ PD    
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            +L   CA++ A + G Q+  H +K G + +    N+ + MY+KCG I +A + F  +  
Sbjct: 498 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 557

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           + +VSW+AMI G +QHG GK+A + F  ML  G  P++I+ V+VL  C+H+GLV E K +
Sbjct: 558 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLY 617

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           F+ M +  GI P  EH++CM+D+LGRAG   EA +L+D MP +  A VWGALL A +I+ 
Sbjct: 618 FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG 677

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N E+ + AA+ +F ++   S +++LL+ IY+ AG  D+ A+VR+ M+D  +KK PG SW+
Sbjct: 678 NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 737

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           EV++KV+ F   D SH +   I  K+DE+ + +   GYV           ES + ++  H
Sbjct: 738 EVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------TESPRSEI--H 786

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLAVAFG+++ P    I + KNLRIC DCHT  + IS +  RE ++RD  RFHHF++
Sbjct: 787 HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKS 846

Query: 763 GSCSCGGYW 771
           GSCSCG YW
Sbjct: 847 GSCSCGDYW 855



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 255/565 (45%), Gaps = 75/565 (13%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK-D 156
           +L+  + +C   G     R +HG  + +G  S +F  N L+  Y   G L DA  + + D
Sbjct: 22  ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP--NMFTYTS----ALKACAGM 210
           I+ P++++ N ++ G         A +LF +M   ++     + + TS    +  +C  +
Sbjct: 82  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL------------- 257
             +EL  QL     K +   DP V   LVDM+ +CG +D A  +F               
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201

Query: 258 ------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
                             M E+++++WN++I+   Q+G   EA  L   M+R+GV  D T
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T ++ L + A   ++G  KQ+HA  +++  + D Y+ ++LI+ Y KCG  ++A ++F   
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+ T +I    Q+    ++++L+ +M+   +  D F  ++L++ C N      G+
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS---------- 469
           Q+H   +K G        NSL+++YAKCG + +A+  FS + +R IVSW+          
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441

Query: 470 ---------------------AMIGGLAQHGRGKEALQMFGQML-EDGVLPNHITLVSVL 507
                                AM+G   QHG  ++ L+M+  ML +  V P+ +T V++ 
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
             C   G   +          K G+          I +  + G+  EA +L D +  +  
Sbjct: 502 RGCADIG-ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 560

Query: 568 ASVWGALLGAARIYKNVEVGQHAAE 592
            S W A++     Y    +G+ AA+
Sbjct: 561 VS-WNAMITG---YSQHGMGKQAAK 581



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 34/313 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           ++  C ++ DL LG Q+H + + +G +    V+NSL+ +YAKC                 
Sbjct: 367 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 426

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                         GN I +R  FD +  R+ ++WN++   Y+     E+ +  +  M+ 
Sbjct: 427 IVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 486

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              + P+  +  ++   CA  G + LG +I G+++K G   ++  ANA + MY+K G + 
Sbjct: 487 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 546

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +   D+VSWNA+I G   H     A K F  M S    P+  +Y + L  C+
Sbjct: 547 EAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS 606

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMPEKNLI-AW 266
              L + G+     + ++   S  +     +VD+  + G + EA+ +   MP K     W
Sbjct: 607 HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 666

Query: 267 NIVISGHLQNGGD 279
             ++S    +G D
Sbjct: 667 GALLSACKIHGND 679


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/740 (37%), Positives = 429/740 (57%), Gaps = 59/740 (7%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N+++  Y + G F  +R LFD +PER +VSWN +   YV    L +A   F+ M    + 
Sbjct: 94  NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDV- 152

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
               S +++++  A +G     R++     ++   +D+ S NAL+  Y +   LE+A  +
Sbjct: 153 ---CSWNTILSGYAQNGCVDDARRVFD---RMPEKNDV-SWNALLSAYVQNSKLEEACVL 205

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F   E+  +VSWN ++ G V  +    A + F  MK  ++     ++ + +   A     
Sbjct: 206 FGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDV----VSWNTIITGYAQNGEI 261

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           +  RQL           D      +V  Y +   ++EAR +F  MPE+N ++WN +++G+
Sbjct: 262 DEARQL----FDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGY 317

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           +Q      A  LF  M                           C+ V             
Sbjct: 318 VQGERVEMAKELFDVM--------------------------PCRNVSTW---------- 341

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY--LEMQ 391
              N++I  Y +CG + +A  +F +    D V+  +MI  Y+Q G   EAL+L+  +E +
Sbjct: 342 ---NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMERE 398

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              +N  SF  SS L+ CA++ A E GKQ+H  ++K G+ +  F GN+L+ MY KCGSI+
Sbjct: 399 GGRLNRSSF--SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 456

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           +A+  F E+  + IVSW+ MI G ++HG G+EAL+ F  M  +G+ P+  T+V+VL AC+
Sbjct: 457 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACS 516

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           H GLV + + +F +M + +G++P  +HYACM+D+LGRAG  +EA  L+  MPF+ +A++W
Sbjct: 517 HTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIW 576

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           G LLGA+R++ N E+ + AA+ +FA+EPE S  +VLLSN+YAS+G W +V K+R  M+D 
Sbjct: 577 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 636

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            +KK PG SWIE+++K +TF+VGD  H    EI+A L+++   + KAGYV      LHDV
Sbjct: 637 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDV 696

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           EE EKE+++ +HSE+LAVA+G++    G  IRV KNLR+C DCH + ++++K+  R II+
Sbjct: 697 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIIL 756

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD NRFHHF++GSCSCG YW
Sbjct: 757 RDNNRFHHFKDGSCSCGDYW 776



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 3/211 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C     L LG Q+HG +V  G+++  FV N+L++MY KCG+  ++  LF  +  + +
Sbjct: 411 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 470

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IHG 120
           VSWN++ + Y    F EEA+ FF+ M   G++P++ ++ ++++AC+ +G    GR+  H 
Sbjct: 471 VSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHT 530

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
            +   G   +      +VD+  + G LE+A  + K++   PD   W  ++    +H + +
Sbjct: 531 MTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 590

Query: 180 WALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
            A     ++ + E  N  M+   S L A +G
Sbjct: 591 LAETAADKIFAMEPENSGMYVLLSNLYASSG 621


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/671 (39%), Positives = 396/671 (59%), Gaps = 5/671 (0%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +I +CA  G    GR+IH    ++G  SD++ +N LV MY K G+LE+A  VF+     +
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC-AGMELKELGRQLH 220
           + SW  +I  C  H  +  AL LF +M    I P+  ++T+A+ AC AG E    GR LH
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             L +   +   +    LV MY+KCGS++E+   F  M E N ++WN +I+   ++   +
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA      M+ EG+     T  T++ +      +   + +H   ++T F+ D  +VN ++
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVIL 277

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + YGKCG ++DA  +FK  S  D++A  +MI AY+Q G   EAL+ Y  MQ+  + PD +
Sbjct: 278 NMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDY 337

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
              S+++ACA L   E GKQVH  +    F     A NSLVNMY KCG +D A   F + 
Sbjct: 338 TYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELA-NSLVNMYGKCGILDVARSIFDKT 396

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             +G V+W+AMIG  AQH   ++A ++F  M  DG  P++IT +SVL AC +AGL  EA 
Sbjct: 397 A-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAH 455

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            +F  M++  G++P   HY CM++ LG+AG+  +A  L+  MPF+ +   W + L   R 
Sbjct: 456 SYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRS 515

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           + +++ G+ AA+    I+PE S+ +V L+ I+A AG +   +++R+ M D  ++K  G S
Sbjct: 516 HGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRS 575

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLL 700
            I++   VY FT GD+S+ RSKEI+ +L  +   + +AGY P +    HDVE  +KE LL
Sbjct: 576 IIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLL 635

Query: 701 YHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF 760
           + HSE+LA+AFG+I+T  G  +R+ KNLR+C DCH   +  SKI  REIIVRD NRFHHF
Sbjct: 636 FAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHF 695

Query: 761 RNGSCSCGGYW 771
           +NGSCSC  +W
Sbjct: 696 KNGSCSCKDFW 706



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 253/490 (51%), Gaps = 10/490 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+++C     L  G ++H ++   G  SD +V+N LV+MY KCG+  ++R +F+A P ++
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
           V SW  L +        +EA+  F EM+  GI+P+  S ++ INAC+   + L  GR +H
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               + G+   + +  +LV MY+K G+LE++V  F+ +   + VSWNA+IA    H    
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+  Q+M    I     TY + + A       +  R +H  +++     D +V V ++
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD-VVNV-IL 277

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY KCG + +A  +F  M + ++IAWN +I+ + Q+G   EA   +  M  EGV  D  
Sbjct: 278 NMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDY 337

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  +V+ + A+   + V KQVH      AF+  + + NSL++ YGKCG ++ A  IF + 
Sbjct: 338 TYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTE-LANSLVNMYGKCGILDVARSIF-DK 395

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +A   V   +MI AYAQ    ++A +L+L M+     P      S+L+ACAN    E+  
Sbjct: 396 TAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAH 455

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
              V + +  G          +V    K G + DA+     +P +  +++W++ +     
Sbjct: 456 SYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRS 515

Query: 478 HG---RGKEA 484
           HG   RGK A
Sbjct: 516 HGDMKRGKFA 525



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 125/246 (50%), Gaps = 6/246 (2%)

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           +++++   Q G    A+    + +D ++      C  ++ +CA L A  +G+++H  I +
Sbjct: 7   STLLSKRQQLGQIAAAIDALQKRKDADLKE----CVRVIQSCARLGALAEGRRIHQLIRR 62

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  SD +  N LV MY KCGS+++A   F   P + + SW+ +I   AQHGR +EAL +
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F +ML+ G+ P+ ++  + + AC+       A     ++ +++G Q        ++ +  
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           + G  +E+++  ++M  + NA  W A++ A A   + +E  +   +M        S T++
Sbjct: 183 KCGSLEESVKTFESMT-ELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYI 241

Query: 607 LLSNIY 612
            L + Y
Sbjct: 242 TLMSAY 247


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/689 (38%), Positives = 404/689 (58%), Gaps = 33/689 (4%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH + IK G  + +F+ + L++  A  + G++  A+++F  IE P++  WN++I G  
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           +      AL  F +M  S + PN +T+   LK+CA +     G+Q+H  ++K+   SD  
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165

Query: 234 VGVGLVDMYAKCGSM-------------------------------DEARMIFHLMPEKN 262
           +   L++MYA+ G M                               D AR +F  MP K+
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           +++WN +I+G+ Q G   EA  LF  M +  V  +++T+ +VL + A   A+ +   + +
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
                   S+  +VN+LID Y KCG ++ A ++F +    D+++   MI  Y      +E
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL L+ EM    + P      S+L +CA+L A + GK +H +I K      T    SL++
Sbjct: 346 ALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLID 405

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           +YAKCG+I  A + F  +  + + SW+AMI GLA HG+  +A ++F +M  DG+ PN IT
Sbjct: 406 LYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEIT 465

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            V +L AC HAGLV   +  F SM + + I P  +HY CMID+LGRAG F+EA  L+  M
Sbjct: 466 FVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM 525

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
             + + ++WG+LLGA R +  VE+G+  AE LF +EP+    +VLLSNIYA AG WD+VA
Sbjct: 526 EVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVA 585

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           ++R  + D  +KK PG + IEV + V+ F VGD+ H +S++IY  L+EV + L   G+V 
Sbjct: 586 RIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVA 645

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
                L+D++E  KE  L HHSEKLA+AFGLI+T PG  IR+ KNLR+C +CH++ + IS
Sbjct: 646 DTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLIS 705

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KI +REII RD NRFHHF++GSCSC  YW
Sbjct: 706 KIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 240/502 (47%), Gaps = 39/502 (7%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H  ++ TG  +  F  + L+   A  + G+   +  LF++I E ++  WNS+      
Sbjct: 47  QIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSM 106

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                 A+ FF  M+ SG+ PN ++   ++ +CA    +  G++IH + +KLG+ SD+F 
Sbjct: 107 SLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFI 166

Query: 134 ANALVDMYAKVG------------NLEDAVA-------------------VFKDIEHPDI 162
             +L++MYA+ G            N  DA++                   +F ++   D+
Sbjct: 167 HTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDV 226

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           VSWNA+IAG      +  AL LF+ M+ + + PN  T  S L ACA     +LG  +   
Sbjct: 227 VSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSW 286

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           +    + S+  +   L+DMY+KCG +  AR +F  M E+++I+WN++I G+       EA
Sbjct: 287 IEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEA 346

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
            +LF  M   GV   + T  ++L S A   AI + K +HA   K        +  SLID 
Sbjct: 347 LALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDL 406

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y KCG++  A ++F       L +  +MI   A  G  ++A +L+ +M    I P+    
Sbjct: 407 YAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITF 466

Query: 403 SSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI- 460
             +L+AC +    + G+Q    +++ +     +     ++++  + G  ++A+     + 
Sbjct: 467 VGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNME 526

Query: 461 --PDRGIVSWSAMIGGLAQHGR 480
             PD  I  W +++G    HGR
Sbjct: 527 VKPDGAI--WGSLLGACRDHGR 546



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 231/500 (46%), Gaps = 73/500 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG------------NFID 48
           +LK+C        G Q+H  V+  GF SD F+  SL+ MYA+ G            NF D
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194

Query: 49  S-------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           +                   R+LFD +P + VVSWN++ + Y      +EA+  F++M  
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK 254

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + + PNE ++ S+++ACA S    LG  +  +    G  S++   NAL+DMY+K G+L+ 
Sbjct: 255 ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQT 314

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F D+   D++SWN +I G         AL LF++M +S + P   T+ S L +CA 
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAH 374

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +LG+ +H  + K        +   L+D+YAKCG++  AR +F  M  K+L +WN +
Sbjct: 375 LGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAM 434

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G   +G   +A  LF  M  +G+  ++ T   +L +         CK    + +   F
Sbjct: 435 ICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA---------CKHAGLVDLGQQF 485

Query: 330 ES---DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
            S    DY ++     YG                         MI    + GL EEA  L
Sbjct: 486 FSSMVQDYKISPKSQHYG------------------------CMIDLLGRAGLFEEAESL 521

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV-NMYA 445
              +Q+ E+ PD  +  SLL AC +    E G+ V   +  F    D      L+ N+YA
Sbjct: 522 ---LQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERL--FELEPDNPGAYVLLSNIYA 576

Query: 446 KCGSIDDADRAFSEIPDRGI 465
             G  DD  R  + + DRG+
Sbjct: 577 GAGKWDDVARIRTRLNDRGM 596



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 35/306 (11%)

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID--AYGKCGHVEDAVKIFKESSAV 362
           LK ++  Q+I   KQ+HA  +KT   +  + ++ LI+  A  + G +  A+ +F      
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           +L    SMI   +       AL  ++ M    + P+S+    LL +CA L++  +GKQ+H
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA----------------------------D 454
            H++K GF+SD F   SL+NMYA+ G +++A                            D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 455 RA---FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           RA   F E+P + +VSW+AMI G AQ GR KEAL +F  M +  V PN  T+VSVL AC 
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            +  + +  +   S  +  G+    +    +ID+  + G  Q A EL D M  + +   W
Sbjct: 273 QSNAL-DLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISW 330

Query: 572 GALLGA 577
             ++G 
Sbjct: 331 NVMIGG 336


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/629 (40%), Positives = 388/629 (61%), Gaps = 12/629 (1%)

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
           K ++   + SWN++IA       +  AL  F  M+   ++PN  T+   +K+C+ +    
Sbjct: 44  KYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLC 103

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G+Q+H         SD  V   L+DMY+KCG +++AR +F  +PE+N+++W  +ISG++
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYV 163

Query: 275 QNGGDMEAASLFP-WMYREGVGFDQ----------TTLSTVLKSVASFQAIGVCKQVHAL 323
           QN    EA  LF  ++  +   +D+            L  V+ + A      V + VH L
Sbjct: 164 QNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGL 223

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           +VK  FE    + N+L+DAY KCG +  + K+F      D+ +  S+I  YAQ GL  EA
Sbjct: 224 AVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEA 283

Query: 384 LKLYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
             L+ +M  R E+  ++   S++L ACA+  A + GK +H  ++K     +   G S+V+
Sbjct: 284 FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVD 343

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY KCG ++ A +AF  +  + + SW+ M+ G   HG GKEA+++F +M+  G+ PN+IT
Sbjct: 344 MYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYIT 403

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            VSVL AC+HAGL+ E  H F  M+ +F ++P  EHY+CM+D+LGRAG  +EA  L+  M
Sbjct: 404 FVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM 463

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
             + +  VWG+LLGA RI+KNVE+G+ +A  LF ++P     +VLLSNIYA AG WD+V 
Sbjct: 464 KVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVE 523

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           ++R  MK++ L K PG S +E K +V+ F VGD+ H + ++IY  LDE++  L + GY+P
Sbjct: 524 RMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMP 583

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
            V + L+DV+  EK  +L  HSEKLAVAFG++ + PG+ I++ KNLRIC DCH + + IS
Sbjct: 584 NVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLIS 643

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KIV+REI++RD  RFHHF++G CSCG YW
Sbjct: 644 KIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 241/481 (50%), Gaps = 54/481 (11%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K+C+S  DL  G Q+H      G+ SD FVA++L+ MY+KCG   D+R+LFD IPER+V
Sbjct: 93  IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL-----------SGIRPNEFSLSSMINACAGSG 110
           VSW S+ S YV  +   EAV  FKE +L            G+  +   L  +I+ACA   
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
              +   +HG ++K G++  +   N L+D YAK G +  +  VF  +E  D+ SWN++IA
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIA 272

Query: 171 GCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
               +  +  A  LF  M K  E+  N  T ++ L ACA     ++G+ +H  ++KME++
Sbjct: 273 VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE 332

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            + +VG  +VDMY KCG ++ AR  F  +  KN+ +W ++++G+  +G   EA  +F  M
Sbjct: 333 DNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQ-VHALS-VKTAFESDDYI--VNSLIDAYGK 345
            R G+  +  T  +VL   A+    G+ K+  H  + +K  F+ +  I   + ++D  G+
Sbjct: 393 IRCGIKPNYITFVSVL---AACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGR 449

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
            G++++A                        +GL          +Q+ ++ PD  V  SL
Sbjct: 450 AGYLKEA------------------------YGL----------IQEMKVKPDFIVWGSL 475

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L AC      E G+     + K    S+      L N+YA  G  DD +R    + + G+
Sbjct: 476 LGACRIHKNVELGEISARKLFKLD-PSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGL 534

Query: 466 V 466
           +
Sbjct: 535 L 535



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 13/217 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L +G  +H  VV    + +  V  S+V MY KCG    +R+ FD +  ++
Sbjct: 306 VLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKN 365

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW  + + Y      +EA+  F EM+  GI+PN  +  S++ AC+ +G  LL    H 
Sbjct: 366 VKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAG--LLKEGWHW 423

Query: 121 YS-IKLGYDSD--MFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           ++ +K  +D +  +   + +VD+  + G L++A  + ++++  PD + W +++  C +H+
Sbjct: 424 FNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHK 483

Query: 177 HNDW----ALKLFQQMKSSEINPNMFTYTSALKACAG 209
           + +     A KLF+   S   N   +   S + A AG
Sbjct: 484 NVELGEISARKLFKLDPS---NCGYYVLLSNIYADAG 517


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 280/748 (37%), Positives = 418/748 (55%), Gaps = 100/748 (13%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS--CYVHCDFLEEAVCFF 84
           D DE   N+++  YA  G   ++R+LF   P RS ++W+SL S  C   CD   EA+  F
Sbjct: 69  DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDV--EALELF 126

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
            EM   G RPN+F+  S++  C+       G++IH ++IK  +DS+ F    LVDMYAK 
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 145 GNLEDAVAVFK-DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
             + +A  +F+   +  + V W A++ G   +     A++ F+ M+   I  N FT+ S 
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L AC  +     G Q+H  +++    ++  VG  LVDMY+KCG +  AR +   M   + 
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I G ++ G   EA SLF  M+   +  D+ T  +++                  
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN----------------- 349

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
                        N+L+D Y K G+ + A  +F++ +  D+++ TS++T     G  EEA
Sbjct: 350 -------------NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 396

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L+L+ EM+   I+PD  V +++L+A                             NSLV+M
Sbjct: 397 LRLFCEMRIMGIHPDQIVIAAVLSA---------------------------LDNSLVSM 429

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG I+DA++ F  +  + +++W+A+I G AQ+GRG++                    
Sbjct: 430 YAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD-------------------- 469

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
                             +F+SME+ +GI+P  EHYACMID+LGR+GK  EA EL++ M 
Sbjct: 470 ------------------YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMA 511

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            Q +A+VW ALL A R++ NVE+G+ AA  LF +EP+ +  +VLLSN+Y++AG W+  AK
Sbjct: 512 VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 571

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
            RR MK   + KEPG SWIE+  KV+ F   DRSH R+ EIY+K+DE+  L+ +AGYVP 
Sbjct: 572 TRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPD 631

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
           +   LHD++E  KE  L +HSEKLAVAFGL+  PPGA IR+ KNLRIC DCHT+ +++S 
Sbjct: 632 MNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSG 691

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  R +I+RD N FHHFR G+CSC  YW
Sbjct: 692 VFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 194/403 (48%), Gaps = 58/403 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           VL+ C+    L  G Q+H   + T FDS+ FV   LV MYAKC   +++  LF+  P+ R
Sbjct: 144 VLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKR 203

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + V W ++ + Y       +A+  F++M   GI  N+F+  S++ AC        G ++H
Sbjct: 204 NHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVH 263

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  ++ G+ +++F  +ALVDMY+K G+L +A  + + +E  D VSWN++I GCV     +
Sbjct: 264 GCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGE 323

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LF+ M    +  + FTY S                              +V   LV
Sbjct: 324 EALSLFRIMHLRHMKIDEFTYPS------------------------------LVNNALV 353

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G  D A  +F  M +K++I+W  +++G + NG   EA  LF  M   G+  DQ 
Sbjct: 354 DMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQI 413

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            ++ VL ++                            NSL+  Y KCG +EDA K+F   
Sbjct: 414 VIAAVLSALD---------------------------NSLVSMYAKCGCIEDANKVFDSM 446

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
              D++  T++I  YAQ G G +  +   E+   +  P+ + C
Sbjct: 447 EIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYAC 489



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 47/278 (16%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F     V N+LV MYAK G F  +  +F+ + ++ V+SW SL +  VH    EEA+  F 
Sbjct: 342 FTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFC 401

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           EM + GI P++  ++++++A                             N+LV MYAK G
Sbjct: 402 EMRIMGIHPDQIVIAAVLSAL---------------------------DNSLVSMYAKCG 434

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSAL 204
            +EDA  VF  +E  D+++W A+I G   +  N      FQ M+    I P    Y   +
Sbjct: 435 CIEDANKVFDSMEIQDVITWTALIVG---YAQNGRGRDYFQSMEEVYGIKPGPEHYACMI 491

Query: 205 ----KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD----EARMIFH 256
               ++   ME KEL       L +M ++ D  V   L+      G+++     A  +F 
Sbjct: 492 DLLGRSGKLMEAKEL-------LNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFE 544

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           L P KN + + ++ + +   G   EAA     M   GV
Sbjct: 545 LEP-KNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 581



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 34/199 (17%)

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C  L   E    +   +   G +  +   N +++  +KCG +DDA + F  +PDR   SW
Sbjct: 16  CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75

Query: 469 SAMIGGLAQHGRGK-------------------------------EALQMFGQMLEDGVL 497
           + MIG  A  GR                                 EAL++F +M  +G  
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 498 PNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           PN  T  SVL  C+   L+ + K  H  +++ +F           ++D+  +     EA 
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV--VTGLVDMYAKCKCILEAE 193

Query: 557 ELVDTMPFQANASVWGALL 575
            L +  P + N  +W A++
Sbjct: 194 YLFELAPDKRNHVLWTAMV 212


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 250/600 (41%), Positives = 371/600 (61%), Gaps = 10/600 (1%)

Query: 182 LKLFQQMKSSEINPNMFT----------YTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
           + +F   +  E++P  ++          +   L+ CA        +  H   ++ME++ D
Sbjct: 38  ISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGD 97

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             +   L++ Y+KCG ++ AR +F  M E++L++WN +I  + +N  + EA  +F  M  
Sbjct: 98  VTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRN 157

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           EG  F + T+S+VL +  +      CK++H LS+KT+ + + Y+  +L+D Y KCG + D
Sbjct: 158 EGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIND 217

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           AV++F+       V  +SM+  Y Q    EEAL LY   Q   +  + F  SS++ AC+N
Sbjct: 218 AVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 277

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L+A  +GKQ+H  I K GF S+ F  +S V+MYAKCGS+ ++   FSE+ ++ I  W+ +
Sbjct: 278 LAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTI 337

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G A+H R KE + +F +M +DG+ PN +T  S+L  C H GLV E +  F+ M   +G
Sbjct: 338 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 397

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           + P   HY+CM+DILGRAG   EA EL+ ++PF+  AS+WG+LL + R+ KN+E+ + AA
Sbjct: 398 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAA 457

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           + LF +EPE +  HVLLSNIYA+   W+ +AK R+ ++D  +KK  G SWI++KDKV+ F
Sbjct: 458 KKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIF 517

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
            VG+ SH R +EI   LD +   L K GY P VE +LHDVE  +KE+LL  HSEKLA+ F
Sbjct: 518 RVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 577

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GL+  P G+T+R+ KNLRICVDCH   +  S    R IIVRD NRFHHF +G CSCG +W
Sbjct: 578 GLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 197/359 (54%), Gaps = 3/359 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C     +      HG  +      D  ++N L+  Y+KCG    +R++FD + ERS
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++   Y       EA+  F EM   G + +EF++SS+++AC  + D+L  +K+H 
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K   D +++   AL+D+YAK G + DAV VF+ ++    V+W++++AG V  ++ + 
Sbjct: 189 LSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+++ +   +  N FT +S + AC+ +     G+Q+H  + K    S+  V    VD
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVD 308

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ E+ +IF  + EKN+  WN +ISG  ++    E   LF  M ++G+  ++ T
Sbjct: 309 MYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 368

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFK 357
            S++L        +   ++   L ++T +     +V  + ++D  G+ G + +A ++ K
Sbjct: 369 FSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 426


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/733 (36%), Positives = 420/733 (57%), Gaps = 5/733 (0%)

Query: 44  GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
           G    +R++FD IP     ++N+L   Y        A+  ++ M+   + PN+++   ++
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
            AC+   D   GR IH ++   G  +D+F + AL+D+Y +      A  VF  +   D+V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           +WNA++AG   H     A+     M+    + PN  T  S L   A       G  +H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 223 LIKMEIKSDP---IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
            ++  ++ +    ++G  L+DMYAKC  +  A  +FH MP +N + W+ +I G +     
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 280 MEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            EA +LF  M  EG+ F   T++++ L+  AS   + +  Q+HAL  K+   +D    NS
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y K G + +A   F E +  D ++  ++++   Q G  EEA  ++ +MQ   + PD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                SL+ AC++L+A + GK  H  +I  G   +T   NSL++MYAKCG ID + + F 
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           ++P R +VSW+ MI G   HG GKEA  +F  M   G  P+ +T + ++ AC+H+GLV E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            KH F++M  K+GI P  EHY CM+D+L R G   EA + + +MP +A+  VWGALLGA 
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+KN+++G+  + ++  + PE +   VLLSNI+++AG +D  A+VR   K    KK PG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            SWIE+   ++ F  GD+SH  S++IY +LD +   + K GY       L D+EE EKE+
Sbjct: 648 YSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEK 707

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L +HSEKLA+AFG+++     TI V KNLR+C DCHT+ ++++ + +R IIVRD NRFH
Sbjct: 708 ALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFH 767

Query: 759 HFRNGSCSCGGYW 771
           HF+NG CSCG +W
Sbjct: 768 HFKNGQCSCGNFW 780



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 263/532 (49%), Gaps = 15/532 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC++  DL  G  +H      G  +D FV+ +L+ +Y +C  F  +R +F  +P R 
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN++ + Y +      A+    +M    G+RPN  +L S++   A  G    G  IH
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 120 GYSIKLGYDSD---MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            Y ++   + +   +    AL+DMYAK   L  A  VF  +   + V+W+A+I G VL +
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285

Query: 177 HNDWALKLFQQMKSSEIN-PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
               A  LF+ M    +   +  +  SAL+ CA +    +G QLH  + K  I +D    
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MYAK G ++EA M F  +  K+ I++  ++SG +QNG   EA  +F  M    + 
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  T+ +++ + +   A+   K  H   +      +  I NSLID Y KCG ++ + ++
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLS 413
           F +  A D+V+  +MI  Y   GLG+EA  L+L M+++   PD  +F+C  L+ AC++  
Sbjct: 466 FDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFIC--LIAACSHSG 523

Query: 414 AYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAM 471
              +GK        K+G +        +V++ A+ G +D+A +    +P +  V  W A+
Sbjct: 524 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGAL 583

Query: 472 IGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           +G    H     GK+  ++  ++  +G   N + L ++  A       AE +
Sbjct: 584 LGACRIHKNIDLGKQVSRIIQKLGPEGT-GNFVLLSNIFSAAGRFDEAAEVR 634


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/781 (33%), Positives = 441/781 (56%), Gaps = 12/781 (1%)

Query: 1    VLKACTSKKDLFLGLQVHGIVV----FTGFDS------DEFVANSLVVMYAKCGNFIDSR 50
            VL AC       +G  VHG  V      G DS      D  + + LV MY KCG+   +R
Sbjct: 311  VLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASAR 370

Query: 51   RLFDAIPERSVVS-WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
            R+FDA+  +  V  WN +   Y      EE++  F +M   GI P+E ++S ++      
Sbjct: 371  RVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCL 430

Query: 110  GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
              +  G   HGY +KLG+ +     NAL+  YAK   + DAV VF  +   D +SWN+VI
Sbjct: 431  SCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVI 490

Query: 170  AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
            +GC  +  N  A++LF +M +     +  T  S L ACA       GR +H   +K  + 
Sbjct: 491  SGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLI 550

Query: 230  SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
             +  +   L+DMY+ C        IF  M +KN+++W  +I+ +++ G   + A L   M
Sbjct: 551  GETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEM 610

Query: 290  YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
              +G+  D   +++ L + A  +++   K VH  +++   E    + N+L++ Y KC +V
Sbjct: 611  VLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNV 670

Query: 350  EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            E+A  IF   +  D+++  ++I  Y++     E+  L+ +M   +  P++   + +L A 
Sbjct: 671  EEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAA 729

Query: 410  ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
            A++S+ E+G+++H + ++ GF+ D++A N+LV+MY KCG++  A   F  +  + ++SW+
Sbjct: 730  ASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWT 789

Query: 470  AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
             MI G   HG GK A+ +F QM   G+ P+  +  ++L AC H+GL AE +  F++M+K+
Sbjct: 790  IMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKE 849

Query: 530  FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
            + I+P  +HY C++D+L R G  +EA+E +++MP + ++S+W +LL   RI+KNV++ + 
Sbjct: 850  YKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEK 909

Query: 590  AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
             A+ +F +EPE +  +VLL+NIYA A  W+ V K++  +    L++  G SWIEV+ KV+
Sbjct: 910  VADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVH 969

Query: 650  TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
             F   +R+H     I   LD+V+  + + G+ P  +  L   +++  ++ L  HS KLAV
Sbjct: 970  VFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAV 1029

Query: 710  AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
            AFG++  P G  IRV KN ++C  CH + +FISK+ +REII+RD +RFH F  G CSC G
Sbjct: 1030 AFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRG 1089

Query: 770  Y 770
            Y
Sbjct: 1090 Y 1090



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 258/525 (49%), Gaps = 19/525 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIV-----VFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA 55
           V++ C  ++ L    + H ++       TG      +   LV+ Y KCG+  ++R +FD 
Sbjct: 103 VVQLCGEERSLEAAKRAHALIRASSAAATG-GKGSVLGKRLVLAYLKCGDLGEARTVFDG 161

Query: 56  IPERS--VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           +P ++  V  W SL S Y      +EAV  F++M   G+ P+  ++S ++   +  G   
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLT 221

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            G  IHG   KLG       ANAL+ +Y++ G +EDA  VF  +   D +SWN++I GC 
Sbjct: 222 EGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCF 281

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM------- 226
            +  +  A+ LF +M S     +  T  S L ACAG+    +G+ +H   +K        
Sbjct: 282 SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLD 341

Query: 227 EIKS---DPIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEA 282
            ++S   D  +G  LV MY KCG M  AR +F  M  K N+  WN+++ G+ + G   E+
Sbjct: 342 SVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEES 401

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
            SLF  M+  G+  D+  +S +LK +            H   VK  F +   + N+LI  
Sbjct: 402 LSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISF 461

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y K   + DAV +F      D ++  S+I+  +  GL  EA++L++ M  +    DS   
Sbjct: 462 YAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTL 521

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            S+L ACA    +  G+ VH + +K G + +T   N+L++MY+ C      ++ F  +  
Sbjct: 522 LSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQ 581

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           + +VSW+AMI    + G   +   +  +M+ DG+ P+   + S L
Sbjct: 582 KNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSAL 626



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 145/298 (48%), Gaps = 15/298 (5%)

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHAL----SVKTAFESDDYIVNSLIDAYGKCGHVE 350
           G D  +   V++     +++   K+ HAL    S          +   L+ AY KCG + 
Sbjct: 94  GVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLG 153

Query: 351 DAVKIFK--ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +A  +F      A D+   TS+++AYA+ G  +EA+ L+ +MQ   ++PD+   S +L  
Sbjct: 154 EARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKC 213

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
            ++L +  +G+ +H  + K G        N+L+ +Y++CG ++DA R F  +  R  +SW
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISW 273

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA--GLVAEAKHHFESM 526
           ++MIGG   +G    A+ +F +M   G   + +T++SVL AC     GL+ +A H +   
Sbjct: 274 NSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVK 333

Query: 527 EK-KFGIQPMQEHY------ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               +G+  +Q         + ++ +  + G    A  + D M  + N  VW  ++G 
Sbjct: 334 SGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGG 391


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/664 (38%), Positives = 390/664 (58%), Gaps = 32/664 (4%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           +Y+ +  L D++ +F  I  P  ++W +VI     H     +L  F  M +S + P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA-------- 251
           + S LK+CA +    LG  LH  +I++ +  D   G  L++MY+K   ++E+        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 252 ------------------------RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                                   R IF +MPEK+L++WN +I+G+ +NG   E   +  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M    +  D  TLS+VL  +A    I   K++H  S++   ++D Y+ +SLID Y KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            V D+ ++F   +  D ++  S+I    Q GL +E L+ + +M   +I P S+  SS++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           ACA+L+    GKQ+H +I + GF  + F  +SLV+MYAKCG+I  A + F  +  R +VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           W+AMI G A HG+  +A+++F QM  +G+ PNH+  ++VL AC+H GLV EA  +F SM 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           + FGI P  EHYA + D+LGRAG+ +EA + +  M      S+W  LL A R++ N+++ 
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA 528

Query: 588 QHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDK 647
           +  A  +  ++P  +  ++LL+NIY++A  W   AK R  M+   ++K P  SWIEVK+K
Sbjct: 529 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 588

Query: 648 VYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKL 707
           VY F  GD SH   ++I   ++ + +L+ K GYVP      HDVEE +K+ L+  HSE+L
Sbjct: 589 VYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERL 648

Query: 708 AVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           A+ FG+I TP G TIRV KNLR+C DCHT+ +FISKIV REI+VRD +RFHHF+NG+CSC
Sbjct: 649 AIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSC 708

Query: 768 GGYW 771
           G YW
Sbjct: 709 GDYW 712



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 273/594 (45%), Gaps = 98/594 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK-------------CGNFI 47
           VLK+C    DL LG  +HG ++  G D D +  N+L+ MY+K              G   
Sbjct: 112 VLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVF 171

Query: 48  DS-------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D                    R++F+ +PE+ +VSWN++ +        EE +   +EM 
Sbjct: 172 DEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMG 231

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            + ++P+ F+LSS++   A + D   G++IHG SI+ G D+D++ A++L+DMYAK   + 
Sbjct: 232 GANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVA 291

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           D+  VF  +   D +SWN++IAGCV +   D  L+ F+QM  ++I P  ++++S + ACA
Sbjct: 292 DSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACA 351

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +    LG+QLH  + +     +  +   LVDMYAKCG++  A+ IF  M  +++++W  
Sbjct: 352 HLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTA 411

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G   +G   +A  LF  M  EG+  +      VL + +           H   V  A
Sbjct: 412 MIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS-----------HGGLVDEA 460

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           ++      NS+   +G    VE        ++  DL+          + G  EEA     
Sbjct: 461 WK----YFNSMTRDFGIAPGVE------HYAAVSDLL---------GRAGRLEEAYDFIC 501

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M    I P   + ++LL+AC      +  ++V   I++    ++T A   L N+Y+   
Sbjct: 502 GMH---IGPTGSIWATLLSACRVHXNIDMAEKVANRILEVD-PNNTGAYILLANIYSAAR 557

Query: 449 SIDDADRAFSEIPDRGI-----VSW-------SAMIGGLAQHG---RGKEALQMFGQMLE 493
              +A +  + +   GI      SW        A + G   H    + +EA+++  +++E
Sbjct: 558 RWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELME 617

Query: 494 -DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
            +G +P+                 +E  H  E  +KK+ +    E  A +  I+
Sbjct: 618 KEGYVPD----------------TSEVHHDVEEEQKKYLVCSHSERLAIVFGII 655



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 204/405 (50%), Gaps = 32/405 (7%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           +Y+      DS RLF+ I     ++W S+  CY       +++  F  M+ SG+ P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA-------- 150
             S++ +CA   D  LG  +HGY I++G D D+++ NAL++MY+K+  LE++        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 151 ------------------------VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
                                     +F+ +   D+VSWN +IAG   +   +  L++ +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M  + + P+ FT +S L   A       G+++H   I+  + +D  V   L+DMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            + ++  +F L+ E++ I+WN +I+G +QNG   E    F  M    +     + S+++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + A    + + KQ+H    +  F+ + +I +SL+D Y KCG++  A +IF      D+V+
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
            T+MI   A  G   +A++L+ +M+   I P+     ++L AC++
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSH 453



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 34/407 (8%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+    ++ +   +QLH  ++K +  S       L+ +Y+    + ++  +F+ +     
Sbjct: 13  LRNPLSIKSRSQAQQLHAQVLKFQASSL-CNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           +AW  VI  +  +G   ++   F  M   G+  D     +VLKS A    + + + +H  
Sbjct: 72  LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131

Query: 324 SVKTAFESDDYIVNSLIDAYGK-------------CGHV------------------EDA 352
            ++   + D Y  N+L++ Y K              G V                  ED+
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191

Query: 353 V-KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           V KIF+     DLV+  ++I   A+ GL EE L++  EM    + PDSF  SS+L   A 
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
                +GK++H   I+ G  +D +  +SL++MYAKC  + D+ R F+ + +R  +SW+++
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G  Q+G   E L+ F QML   + P   +  S++ AC H   +   K        + G
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK-QLHGYITRNG 370

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
                   + ++D+  + G  + A ++ D M  +   S    ++G A
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 35/243 (14%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA-YGKCGHVEDAVKIF 356
           +  +  +L++  S ++    +Q+HA  +K  F++      SL+ + Y     + D++++F
Sbjct: 6   EALVKALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLF 63

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                   +A  S+I  Y   GL  ++L  ++ M    + PD  V  S+L +CA L    
Sbjct: 64  NTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLN 123

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA-------------------- 456
            G+ +H +II+ G   D + GN+L+NMY+K   ++++ R                     
Sbjct: 124 LGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRT 183

Query: 457 ------------FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
                       F  +P++ +VSW+ +I G A++G  +E L+M  +M    + P+  TL 
Sbjct: 184 VSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLS 243

Query: 505 SVL 507
           SVL
Sbjct: 244 SVL 246


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/733 (36%), Positives = 420/733 (57%), Gaps = 5/733 (0%)

Query: 44  GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
           G    +R++FD IP     ++N+L   Y        A+  ++ M+   + PN+++   ++
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
            AC+   D   GR IH ++   G  +D+F + AL+D+Y +      A  VF  +   D+V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           +WNA++AG   H     A+     M+    + PN  T  S L   A       G  +H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 223 LIKMEIKSDP---IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
            ++  ++ +    ++G  L+DMYAKC  +  A  +FH MP +N + W+ +I G +     
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 280 MEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            EA +LF  M  EG+ F   T++++ L+  AS   + +  Q+HAL  K+   +D    NS
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y K G + +A   F E +  D ++  ++++   Q G  EEA  ++ +MQ   + PD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                SL+ AC++L+A + GK  H  +I  G   +T   NSL++MYAKCG ID + + F 
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           ++P R +VSW+ MI G   HG GKEA  +F  M   G  P+ +T + ++ AC+H+GLV E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            KH F++M  K+GI P  EHY CM+D+L R G   EA + + +MP +A+  VWGALLGA 
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+KN+++G+  + ++  + PE +   VLLSNI+++AG +D  A+VR   K    KK PG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            SWIE+   ++ F  GD+SH  S++IY +LD +   + K GY       L D+EE EKE+
Sbjct: 648 YSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEK 707

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L +HSEKLA+AFG+++     TI V KNLR+C DCHT+ ++++ + +R IIVRD NRFH
Sbjct: 708 ALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFH 767

Query: 759 HFRNGSCSCGGYW 771
           HF+NG CSCG +W
Sbjct: 768 HFKNGQCSCGNFW 780



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 263/532 (49%), Gaps = 15/532 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC++  DL  G  +H      G  +D FV+ +L+ +Y +C  F  +R +F  +P R 
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN++ + Y +      A+    +M    G+RPN  +L S++   A  G    G  IH
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 120 GYSIKLGYDSD---MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            Y ++   + +   +    AL+DMYAK   L  A  VF  +   + V+W+A+I G VL +
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285

Query: 177 HNDWALKLFQQMKSSEIN-PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
               A  LF+ M    +   +  +  SAL+ CA +    +G QLH  + K  I +D    
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MYAK G ++EA M F  +  K+ I++  ++SG +QNG   EA  +F  M    + 
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  T+ +++ + +   A+   K  H   +      +  I NSLID Y KCG ++ + ++
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLS 413
           F +  A D+V+  +MI  Y   GLG+EA  L+L M+++   PD  +F+C  L+ AC++  
Sbjct: 466 FDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFIC--LIAACSHSG 523

Query: 414 AYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAM 471
              +GK        K+G +        +V++ A+ G +D+A +    +P +  V  W A+
Sbjct: 524 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGAL 583

Query: 472 IGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           +G    H     GK+  ++  ++  +G   N + L ++  A       AE +
Sbjct: 584 LGACRIHKNIDLGKQVSRIIQKLGPEGT-GNFVLLSNIFSAAGRFDEAAEVR 634


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/767 (36%), Positives = 425/767 (55%), Gaps = 109/767 (14%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG-- 171
           L R +H + I  G+       N L+D+Y+K   L  A  +F +I  PDIV+   +IA   
Sbjct: 31  LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90

Query: 172 ----------------------------CVLHEHND---WALKLFQQMKSSEINPNMFTY 200
                                          + HN     A++LF  M+     P+ +T+
Sbjct: 91  AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150

Query: 201 TSALKACAGMELKELG-RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS---------MDE 250
           TS L A A +  KE   +QLHC+++K        V   L+  Y KC +         M E
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQN-------------------------------GGD 279
           AR +F  MP ++ ++W  +I+G+++N                               G  
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDY---I 335
           +EA  +F  M    +  D+ T ++V+   A+     + K++HA  +KT A  + D    +
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVA------------CTS-------------- 369
            N+LI  Y KCG V+ A +IF +    DLV+            C                
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390

Query: 370 -----MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
                MI+  AQ G  EEALK +  M+ +   P  +  +  + +C+ L + + G+Q+H  
Sbjct: 391 LSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQ 450

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           ++++G+ S   AGN+L+ MYA+CG +D A   F  +P    +SW+AMI  L QHG+G +A
Sbjct: 451 VVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQA 510

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +++F +ML++G+LP+ I+ ++V+ AC+HAGLV E + +F+SM   +G+ P +EHYA +ID
Sbjct: 511 IELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIID 570

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +L RAGKF EA E++++MPF+  A +W ALL   RI+ N+++G  AAE LF ++P+   T
Sbjct: 571 LLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGT 630

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           +VLLSN+YA AG W+++AKVR+ M+D  +KKEPG SWIEV++KV++F VGD +H   ++I
Sbjct: 631 YVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQI 690

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y  L+++   + K GYVP  +  LHDVE   KE  L  HSEKLAVA+G +  P GAT+RV
Sbjct: 691 YNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRV 750

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLRIC DCH +F+F+SK+V REI+VRD  RFHHFR+G CSCG YW
Sbjct: 751 FKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/600 (23%), Positives = 251/600 (41%), Gaps = 115/600 (19%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS--------- 63
           L   VH  ++ +GF     + N L+ +Y+K      +R LFD IP+  +V+         
Sbjct: 31  LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90

Query: 64  ------------------------WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
                                   +N++ + Y H      A+  F +M     RP+ ++ 
Sbjct: 91  AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150

Query: 100 SSMINACAGSGDSLLG-RKIHGYSIKLGYDSDMFSANALVDMYAKVGN---------LED 149
           +S++ A A   +     +++H   +K G        NAL+  Y K            + +
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHND----------------W------------- 180
           A  +F ++ + D +SW  +I G V +   D                W             
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270

Query: 181 --ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV-- 236
             A ++F++M  S+I  + FT+TS +  CA      LG+++H   +K      P V +  
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330

Query: 237 --GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG- 293
              L+  Y KCG +D A+ IF+ MPE++L++WNI++SG++      EA S F  M  +  
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390

Query: 294 ------------VGFDQTTLSTVLK---------------SVASFQAIGVCK---QVHAL 323
                       +GF +  L    +               ++ S   +G  K   Q+HA 
Sbjct: 391 LSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQ 450

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            V+  +ES     N+LI  Y +CG V+ A  +F     VD ++  +MI A  Q G G +A
Sbjct: 451 VVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQA 510

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV--HVHIIKFGFMSDTFAGNSLV 441
           ++L+ EM    I PD     ++++AC++    ++G++    +H + +G   D      ++
Sbjct: 511 IELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNV-YGVNPDEEHYARII 569

Query: 442 NMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++  + G   +A      +P + G   W A++ G   HG     ++   ++ E  + P H
Sbjct: 570 DLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFE--LKPQH 627



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 213/475 (44%), Gaps = 71/475 (14%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + DE    +++  Y K  +   ++   +   ++  V+WN++ S Y H     EA   F++
Sbjct: 220 NRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRK 279

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL----GYDSDMFSANALVDMYA 142
           M++S I+ +EF+ +S+I+ CA +G   LG+++H Y +K       D  M   NAL+  Y 
Sbjct: 280 MIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV--------------LHEHN--DW------ 180
           K G ++ A  +F  +   D+VSWN +++G V              + E N   W      
Sbjct: 340 KCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISG 399

Query: 181 ---------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    ALK F +MK     P  + +  A+ +C+ +   + GRQLH  +++   +S 
Sbjct: 400 LAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESS 459

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              G  L+ MYA+CG +D A  +F  MP  + I+WN +I+   Q+G   +A  LF  M +
Sbjct: 460 LSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLK 519

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           EG+  D+ +  TV+ + +           HA  VK   E   Y  +S+ + YG     E 
Sbjct: 520 EGILPDRISFLTVISACS-----------HAGLVK---EGRKYF-DSMHNVYGVNPDEEH 564

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
             +I      +DL+ C +      +F   +E       M+     P + +  +LL  C  
Sbjct: 565 YARI------IDLL-CRA-----GKFSEAKEV------MESMPFEPGAPIWEALLAGCRI 606

Query: 412 LSAYEQGKQVHVHIIKFGFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               + G +    + +     D T+    L NMYA  G  +D  +    + DRG+
Sbjct: 607 HGNIDLGIEAAERLFELKPQHDGTYV--LLSNMYAVAGQWNDMAKVRKLMRDRGV 659



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 37/309 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA----NSLVVMYAKCGNFIDSRRLFDAI 56
           V+  C +     LG ++H   + T  +    VA    N+L+  Y KCG    ++ +F+ +
Sbjct: 295 VISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKM 354

Query: 57  PERSVVSWNSLFSCYVHCD-------------------------------FLEEAVCFFK 85
           PER +VSWN + S YV+                                 F EEA+ FF 
Sbjct: 355 PERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFN 414

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M L G  P +++ +  I +C+  G    GR++H   ++ GY+S + + NAL+ MYA+ G
Sbjct: 415 RMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCG 474

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            ++ A  +F ++   D +SWNA+IA    H     A++LF++M    I P+  ++ + + 
Sbjct: 475 VVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVIS 534

Query: 206 ACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
           AC+   L + GR+   S+  +  +  D      ++D+  + G   EA+ +   MP E   
Sbjct: 535 ACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGA 594

Query: 264 IAWNIVISG 272
             W  +++G
Sbjct: 595 PIWEALLAG 603



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 18/242 (7%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           +C+    L  G Q+H  VV  G++S     N+L+ MYA+CG    +  LF  +P    +S
Sbjct: 434 SCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAIS 493

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           WN++ +         +A+  F+EM+  GI P+  S  ++I+AC+ +G    GRK      
Sbjct: 494 WNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMH 553

Query: 124 KL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWA 181
            + G + D      ++D+  + G   +A  V + +   P    W A++AGC +H + D  
Sbjct: 554 NVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLG 613

Query: 182 LKLFQQMKSSEINPN---MFTYTSALKACAG-----------MELKELGRQLHCSLIKME 227
           ++  +++   E+ P     +   S + A AG           M  + + ++  CS I++E
Sbjct: 614 IEAAERL--FELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVE 671

Query: 228 IK 229
            K
Sbjct: 672 NK 673



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 43/171 (25%)

Query: 396 NPDSFVCS-----SLLNACANLS--AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            PDS   +     SLL  C   S  +Y   + VH H+I  GF       N L+++Y+K  
Sbjct: 3   TPDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSS 62

Query: 449 SIDDADRAFSEIPDRGIVS---------------------------------WSAMIGGL 475
            ++ A   F EIP   IV+                                 ++AMI   
Sbjct: 63  KLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAY 122

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           + +  G  A+++F  M  D   P++ T  SVL A     LVAE + H + +
Sbjct: 123 SHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGAL---ALVAEKEKHCQQL 170


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/639 (39%), Positives = 383/639 (59%)

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           SA+ ++ +Y  +  L +A+ VFK +E P +++W +VI           AL  F +M++S 
Sbjct: 41  SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASG 100

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             P+   + S LK+C  M     G  +H  ++++ +  D   G  L++MY+K   +D  R
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVR 160

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F LMP K+++++N VI+G+ Q+G   +A  +   M    +  D  TLS+VL   + + 
Sbjct: 161 KVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYV 220

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   K++H   ++   +SD YI +SL+D Y K   +ED+ ++F      D ++  S++ 
Sbjct: 221 DVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            Y Q G   EAL+L+ +M   ++ P +   SS++ ACA+L+    GKQ+H ++++ GF  
Sbjct: 281 GYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGR 340

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           + F  ++LV+MY+KCG+I  A + F  +     VSW+A+I G A HG G EA+ +F +M 
Sbjct: 341 NIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMK 400

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             GV PN +  V+VL AC+H GLV EA  +F SM K +G+    EHYA + D+LGRAGK 
Sbjct: 401 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 460

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           +EA + +  M  +   SVW  LL +  ++KN+E+ +  AE +F I+ E    +VL+ N+Y
Sbjct: 461 EEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMY 520

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           AS G W  +AK+R  ++   L+K+P  SWIE+K+K + F  GDRSH     I   L  V 
Sbjct: 521 ASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVM 580

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
           + + K GYV      LHDV+E  K +LL+ HSE+LAVAFG+I T PG TIRV KN+RIC 
Sbjct: 581 EQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICT 640

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH + +FISKI  REIIVRD +RFHHF  GSCSCG YW
Sbjct: 641 DCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 240/466 (51%), Gaps = 36/466 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK+CT   DL  G  VHG +V  G D D +  N+L+ MY+K       R++F+ +P + 
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKD 170

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS+N++ + Y      E+A+   +EM  S ++P+ F+LSS++   +   D L G++IHG
Sbjct: 171 VVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHG 230

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y I+ G DSD++  ++LVDMYAK   +ED+  VF  +   D +SWN+++AG V +   + 
Sbjct: 231 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNE 290

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF+QM S+++ P    ++S + ACA +    LG+QLH  +++     +  +   LVD
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG++  AR IF  M   + ++W  +I GH  +G   EA SLF  M R+GV  +Q  
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 410

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL +         C  V  +      E+  Y  NS+   YG    +E        ++
Sbjct: 411 FVAVLTA---------CSHVGLVD-----EAWGYF-NSMTKVYGLNQELEHY------AA 449

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL+          + G  EEA     +M+   + P   V S+LL++C+     E  ++
Sbjct: 450 VADLL---------GRAGKLEEAYDFISKMR---VEPTGSVWSTLLSSCSVHKNLELAEK 497

Query: 421 VHVHIIKFGFMSDTFAGNSLV-NMYAKCGSIDDADRAFSEIPDRGI 465
           V   I  F   S+      L+ NMYA  G   +  +    +  +G+
Sbjct: 498 VAEKI--FTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGL 541



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 236/449 (52%), Gaps = 4/449 (0%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           A+ ++ +Y       ++  +F  +    V++W S+  C+        A+  F EM  SG 
Sbjct: 42  ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGR 101

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            P+     S++ +C    D   G  +HG+ ++LG D D+++ NAL++MY+K+  ++    
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF+ +   D+VS+N VIAG       + AL++ ++M +S++ P+ FT +S L   +    
Sbjct: 162 VFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              G+++H  +I+  I SD  +G  LVDMYAK   ++++  +F  +  ++ I+WN +++G
Sbjct: 222 VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAG 281

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           ++QNG   EA  LF  M    V       S+V+ + A    + + KQ+H   ++  F  +
Sbjct: 282 YVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRN 341

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            +I ++L+D Y KCG+++ A KIF   +  D V+ T++I  +A  G G EA+ L+ EM+ 
Sbjct: 342 IFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSID 451
           + + P+     ++L AC+++   ++       + K +G   +     ++ ++  + G ++
Sbjct: 402 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 461

Query: 452 DADRAFSE--IPDRGIVSWSAMIGGLAQH 478
           +A    S+  +   G V WS ++   + H
Sbjct: 462 EAYDFISKMRVEPTGSV-WSTLLSSCSVH 489


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 281/779 (36%), Positives = 442/779 (56%), Gaps = 15/779 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L++C++ +       VH  +V        F+ N+L+  Y + G    +RRL D +P  + 
Sbjct: 24  LRSCSAPRH---AAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGGH--ARRLLDEMPRTNA 78

Query: 62  VSWNSLFSCYVHCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VS+N L   Y      E ++  F +    +G+R + F+ ++ + AC+ +G    G+ +H 
Sbjct: 79  VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+  G    +F +N+LV MYA+ G++  A  VF   +  D VSWNA+++G V     D 
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDD 198

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGME--LKELGRQLHCSLIKMEIKSDPIVGVGL 238
            L++F  M+ S I  N F   S +K CAG +  + ++   +H  ++K    SD  +   +
Sbjct: 199 MLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAM 258

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN----GGDM--EAASLFPWMYRE 292
           V MYAK G++ EA  +F  + + N++ +N +I+G  ++    G D+  EA SL+  +   
Sbjct: 259 VGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSR 318

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+   + T S+V+++      I   KQ+H   +K  F+ DD+I ++LID Y   G +ED 
Sbjct: 319 GMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDG 378

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            + F      D+V  T+MI+   Q  L E AL L+ E+    + PD F  SS++NACA+L
Sbjct: 379 FRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASL 438

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +    G+Q+     K GF   T  GNS ++MYA+ G +  A R F E+    IVSWSA+I
Sbjct: 439 AVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVI 498

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
              AQHG  ++AL+ F +M++  V+PN IT + VL AC+H GLV E   ++E+M++++ +
Sbjct: 499 SSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYAL 558

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P  +H  C++D+LGRAG+  +A   +    F     +W +LL + RI++++E GQ  A+
Sbjct: 559 SPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVAD 618

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            +  ++P  S+++V L NIY  AG     +K+R  MK+  +KKEPG+SWIE++  V++F 
Sbjct: 619 RIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFV 678

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD+SH  S  IY+KL E+   ++K        T   D   +E+  + + HSEKLAVA G
Sbjct: 679 AGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQSWMNW-HSEKLAVALG 737

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI  P  A IRV KNLR+C DCH + + ISK   REI++RD  RFHHFR+GSCSC  YW
Sbjct: 738 LIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 144/266 (54%), Gaps = 8/266 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC    D+  G Q+HG V+   F  D+F+ ++L+ +Y   G   D  R F ++P++ 
Sbjct: 330 VIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQD 389

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W ++ S  V  +  E A+  F E++ +G++P+ F++SS++NACA    +  G +I  
Sbjct: 390 VVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQC 449

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++ K G+       N+ + MYA+ G++  AV  F+++E  DIVSW+AVI+    H     
Sbjct: 450 FATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARD 509

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           AL+ F +M  +++ PN  T+   L AC+   L + G + +   +K E    P +     +
Sbjct: 510 ALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY-ETMKEEYALSPTIKHCTCV 568

Query: 239 VDMYAKCGSMDEARM-----IFHLMP 259
           VD+  + G + +A       IFH  P
Sbjct: 569 VDLLGRAGRLADAEAFIRDSIFHDEP 594


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/686 (39%), Positives = 406/686 (59%), Gaps = 11/686 (1%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM--FSANALVDMYAKVGNLEDA 150
           RP    L S + +   S  SLLGR +H + ++  +D+ +  F  N LV+MY+K+ +L ++
Sbjct: 5   RPPNL-LGSFLESAVLSRSSLLGRAVHAHILRT-HDTPLPSFLCNHLVNMYSKL-DLPNS 61

Query: 151 VAVFKDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
             +   + +P  +V+W ++I+GCV +     AL  F  M+   + PN FT+    KA A 
Sbjct: 62  AQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASAS 121

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           + +   G+QLH   +K     D  VG    DMY+K G   EAR +F  MP +NL  WN  
Sbjct: 122 LHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAY 181

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           +S  +Q+G  ++A + F          +  T    L + A   ++ + +Q+H   V++ +
Sbjct: 182 MSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRY 241

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLY 387
             D  + N LID YGKCG +  +  +F    S   ++V+  S++ A  Q    E A  ++
Sbjct: 242 REDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVF 301

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           L+ + +E+ P  F+ SS+L+ACA L   E G+ VH   +K     + F G++LV++Y KC
Sbjct: 302 LQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKC 360

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED--GVLPNHITLVS 505
           GSI+ A++ F E+P+R +V+W+AMIGG A  G    AL +F +M     G+  +++TLVS
Sbjct: 361 GSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVS 420

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+ AG V      FESM  ++GI+P  EHYAC++D+LGR+G    A E +  MP  
Sbjct: 421 VLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPIL 480

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
              SVWGALLGA +++   ++G+ AAE LF ++P+ S  HV+ SN+ ASAG W+    VR
Sbjct: 481 PTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVR 540

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+D  +KK  G SW+ VK++V+ F   D  H ++ EI A L ++   + KAGYVP   
Sbjct: 541 KEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDAN 600

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             L D+EE EK   +++HSEK+A+AFGLI  P G  IR+ KNLRIC+DCH++ +FISKIV
Sbjct: 601 LSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIV 660

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REIIVRD NRFH F++G CSC  YW
Sbjct: 661 GREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 240/488 (49%), Gaps = 8/488 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFT-GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           L++    +   LG  VH  ++ T       F+ N LV MY+K      ++ +      R+
Sbjct: 14  LESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRT 73

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W SL S  VH      A+  F  M    + PN+F+   +  A A     + G+++H 
Sbjct: 74  VVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHA 133

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G   D+F   +  DMY+K G   +A  +F ++ H ++ +WNA ++  V       
Sbjct: 134 LALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLD 193

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++    +  PN  T+ + L ACA +   ELGRQLH  +++   + D  V  GL+D
Sbjct: 194 AIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLID 253

Query: 241 MYAKCGSMDEARMIFHLM--PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
            Y KCG +  + ++F  +    +N+++W  +++  +QN  +  A  +F    R+ V    
Sbjct: 254 FYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVF-LQARKEVEPTD 312

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +S+VL + A    + + + VHAL++K   E + ++ ++L+D YGKCG +E A ++F+E
Sbjct: 313 FMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFRE 372

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE--INPDSFVCSSLLNACANLSAYE 416
               +LV   +MI  YA  G  + AL L+ EM      I        S+L+AC+   A E
Sbjct: 373 MPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVE 432

Query: 417 QGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGG 474
           +G Q+   +  ++G          +V++  + G +D A      +P    +S W A++G 
Sbjct: 433 RGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGA 492

Query: 475 LAQHGRGK 482
              HG+ K
Sbjct: 493 CKMHGKTK 500



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 181/363 (49%), Gaps = 6/363 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KA  S      G Q+H + +  G   D FV  S   MY+K G   ++R +FD +P R+
Sbjct: 115 VFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRN 174

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +WN+  S  V      +A+  FK+ +     PN  +  + +NACA      LGR++HG
Sbjct: 175 LATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHG 234

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI--EHPDIVSWNAVIAGCVLHEHN 178
           + ++  Y  D+   N L+D Y K G++  +  VF  I     ++VSW +++A  V +   
Sbjct: 235 FIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEE 294

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A  +F Q +  E+ P  F  +S L ACA +   ELGR +H   +K  ++ +  VG  L
Sbjct: 295 ERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSAL 353

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGF 296
           VD+Y KCGS++ A  +F  MPE+NL+ WN +I G+   G    A SLF  M     G+  
Sbjct: 354 VDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIAL 413

Query: 297 DQTTLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
              TL +VL + +   A+    Q+  ++  +   E        ++D  G+ G V+ A + 
Sbjct: 414 SYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEF 473

Query: 356 FKE 358
            K 
Sbjct: 474 IKR 476


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/741 (37%), Positives = 422/741 (56%), Gaps = 61/741 (8%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N ++  Y + G F  +R+LFD +PER +VSWN +   YV    L +A   F+ M    + 
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 94  PNEFSLSSMI-NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
                LS    N C     S+  R      +         S NAL+  Y +   +E+A  
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDV---------SWNALLSAYVQNSKMEEACM 209

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +FK  E+  +VSWN ++ G V  +    A + F  M   ++     ++ + +   A    
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGK 265

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            +  RQL           D      +V  Y +   ++EAR +F  MPE+N ++WN +++G
Sbjct: 266 IDEARQL----FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           ++Q G  ME A            FD                +  C+ V            
Sbjct: 322 YVQ-GERMEMAKEL---------FD----------------VMPCRNVSTW--------- 346

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
               N++I  Y +CG + +A  +F +    D V+  +MI  Y+Q G   EAL+L+++M+ 
Sbjct: 347 ----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402

Query: 393 R--EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
               +N  SF  SS L+ CA++ A E GKQ+H  ++K G+ +  F GN+L+ MY KCGSI
Sbjct: 403 EGGRLNRSSF--SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           ++A+  F E+  + IVSW+ MI G ++HG G+ AL+ F  M  +G+ P+  T+V+VL AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +H GLV + + +F +M + +G+ P  +HYACM+D+LGRAG  ++A  L+  MPF+ +A++
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           WG LLGA+R++ N E+ + AA+ +FA+EPE S  +VLLSN+YAS+G W +V K+R  M+D
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             +KK PG SWIE+++K +TF+VGD  H    EI+A L+E+   + KAGYV      LHD
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           VEE EKE+++ +HSE+LAVA+G++    G  IRV KNLR+C DCH + +++++I  R II
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           +RD NRFHHF++GSCSCG YW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 9/214 (4%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C     L LG Q+HG +V  G+++  FV N+L++MY KCG+  ++  LF  +  + +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ + Y    F E A+ FF+ M   G++P++ ++ ++++AC+ +G    GR+ + Y
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YFY 534

Query: 122 SIKLGY----DSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           ++   Y    +S  ++   +VD+  + G LEDA  + K++   PD   W  ++    +H 
Sbjct: 535 TMTQDYGVMPNSQHYA--CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592

Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           + + A     ++ + E  N  M+   S L A +G
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/740 (37%), Positives = 427/740 (57%), Gaps = 59/740 (7%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N+++  Y +   F  +R LFD +PER + SWN + + YV    L EA   F         
Sbjct: 81  NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLF--------- 131

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
                              L+ +K            D+ S NA++  YA+ G +++A  V
Sbjct: 132 ------------------DLMPKK------------DVVSWNAMLSGYAQNGFVDEAREV 161

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  + H + +SWN ++A  V   HN   LK  +++  S+ N  + ++   +       + 
Sbjct: 162 FNKMPHRNSISWNGLLAAYV---HNG-RLKEARRLFESQSNWELISWNCLMGGYVKRNML 217

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
              RQL     +M ++ D I    ++  YA+ G + +A+ +F+  P +++  W  ++SG+
Sbjct: 218 GDARQL---FDRMPVR-DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGY 273

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           +QNG   EA   F  M  +    ++ + + +L     ++ + +  ++          S  
Sbjct: 274 VQNGMVDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISS-- 327

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD- 392
              N++I  YG+ G +  A K+F      D V+  ++I+ YAQ G  EEAL +++EM+  
Sbjct: 328 --WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385

Query: 393 -REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
               N  +F C+  L+ CA+++A E GKQVH  ++K GF +  F GN+L+ MY KCGS D
Sbjct: 386 GESSNRSTFSCA--LSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           +A+  F  I ++ +VSW+ MI G A+HG G++AL +F  M + GV P+ IT+V VL AC+
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           H+GL+     +F SM++ + ++P  +HY CMID+LGRAG+ +EA  L+  MPF   A+ W
Sbjct: 504 HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 563

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALLGA+RI+ N E+G+ AAEM+F +EP+ S  +VLLSN+YA++G W +V K+R  M++ 
Sbjct: 564 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREA 623

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            ++K  G SW+EV++K++TF+VGD  H     IYA L+E+   + + GYV   +  LHDV
Sbjct: 624 GVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 683

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           EE EKE +L +HSEKLAVAFG++  P G  IRV KNLR+C DCH + + ISKIV R II+
Sbjct: 684 EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIIL 743

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD +RFHHF  G CSCG YW
Sbjct: 744 RDSHRFHHFSEGICSCGDYW 763



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 7/213 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C     L LG QVHG VV  GF++  FV N+L+ MY KCG+  ++  +F+ I E+ V
Sbjct: 398 LSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDV 457

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HG 120
           VSWN++ + Y    F  +A+  F+ M  +G++P+E ++  +++AC+ SG  L+ R   + 
Sbjct: 458 VSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSG--LIDRGTEYF 515

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           YS+   Y+    S +   ++D+  + G LE+A  + +++   P   SW A++    +H +
Sbjct: 516 YSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGN 575

Query: 178 NDWALKLFQQM-KSSEINPNMFTYTSALKACAG 209
            +   K  + + K    N  M+   S L A +G
Sbjct: 576 TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/737 (35%), Positives = 434/737 (58%), Gaps = 3/737 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+L+ M+ + G+  ++  +F  + ER + SWN L   Y    F +EA+C +  ++ +G
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           IRP+ ++  S++ +CAG+ D + GR++H + ++  +D D+   NAL+ MY K G++  A 
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F  +   D +SWNA+I+G   ++     L+LF +M+   I+P++ T TS + AC  + 
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
            + LG QLH  +++     +  V   L+ MY   G   EA  +F  M  +++++W  +IS
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G + N    +A   +  M   G   D+ T+++VL + AS   + +  ++H L+ +T    
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + NSLID Y KC  +E A++IF +    D+++ TS+I          EAL  + +M 
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI 430

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
            +   P+S    S L+ACA + A   GK++H H +K G   D F  N+++++Y +CG + 
Sbjct: 431 LKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMR 489

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F+ + ++ + +W+ ++ G AQ G+G   +++F +M+E  + P+ +T +S+LCAC+
Sbjct: 490 TALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACS 548

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            +G+V E   +F+ M+  + I P  +HYAC++D+LGRAGK  EA E ++ MP + + ++W
Sbjct: 549 RSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIW 608

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL A RI+++V +G+ AA+ +F  + E    ++LL N+YA +G WD VAKVRR MK+ 
Sbjct: 609 GALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEE 668

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L  +PG SW+EVK KV+ F  GD  H + +EI   L+   + +  +G+    E    D 
Sbjct: 669 GLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQ-ECSSMDG 727

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
            ++ K  +   HSE+ A+A+ LI + PG  I V KNL +C  CH++ +FISKIV REI V
Sbjct: 728 IQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISV 787

Query: 752 RDVNRFHHFRNGSCSCG 768
           RD  +FHHF++G CSCG
Sbjct: 788 RDTEQFHHFKDGLCSCG 804



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 253/482 (52%), Gaps = 8/482 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL++C    DL  G +VH  VV   FD D  V N+L+ MY KCG+ + +R LFD +P R 
Sbjct: 141 VLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD 200

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ S Y   D   E +  F  M    I P+  +++S+I+AC   GD  LG ++H 
Sbjct: 201 RISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHS 260

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++  YD ++   N+L+ MY  VG+ ++A +VF  +E  D+VSW  +I+GCV +   D 
Sbjct: 261 YVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDK 320

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+ ++ M+ +   P+  T  S L ACA +   ++G +LH    +       +V   L+D
Sbjct: 321 ALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLID 380

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  +++A  IFH +P+K++I+W  VI+G   N    EA   F  M  +    +  T
Sbjct: 381 MYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKP-NSVT 439

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L + L + A   A+   K++HA ++K     D ++ N+++D Y +CG +  A+  F  + 
Sbjct: 440 LISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNE 499

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ A   ++T YAQ G G   ++L+  M + EINPD     SLL AC+      +G +
Sbjct: 500 K-DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLE 558

Query: 421 VHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLA 476
               + + +    +      +V++  + G +++A      +   PD  I  W A++    
Sbjct: 559 YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAI--WGALLNACR 616

Query: 477 QH 478
            H
Sbjct: 617 IH 618



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 5/197 (2%)

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNS 439
           E+ALK    MQ+ +I  +     +L+  C N   Y +G+ V   ++     +     GN+
Sbjct: 15  EQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNA 74

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++M+ + G + +A   F  + +R + SW+ ++GG  + G   EAL ++ ++L  G+ P+
Sbjct: 75  LLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPD 134

Query: 500 HITLVSVLCACNHA-GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
             T  SVL +C  A  LV   + H   +   F +    +    +I +  + G    A  L
Sbjct: 135 VYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDV--DVVNALITMYVKCGDVVSARML 192

Query: 559 VDTMPFQANASVWGALL 575
            D MP +   S W A++
Sbjct: 193 FDKMPTRDRIS-WNAMI 208


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 385/592 (65%), Gaps = 3/592 (0%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            L +   +    + P+   Y + LK C  + +LKE G+ +H  ++    K D ++   L+
Sbjct: 58  GLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKE-GKLVHFHVLNSNFKHDLVIQNSLL 116

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYA+CGS++ AR +F  MP +++++W  +I+G+ QN    +A  LFP M  +G   ++ 
Sbjct: 117 FMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEF 176

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS+++K      +    +Q+HA   K    S+ ++ +SL+D Y +CG++ +A+ +F + 
Sbjct: 177 TLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKL 236

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              + V+  ++I  YA+ G GEEAL L++ MQ     P  F  S+LL++C+++   EQGK
Sbjct: 237 GCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGK 296

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H H++K       + GN+L++MYAK GSI DA++ F ++    +VS ++M+ G AQHG
Sbjct: 297 WLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHG 356

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GKEA Q F +M+  G+ PN IT +SVL AC+HA L+ E KH+F  M +K+ I+P   HY
Sbjct: 357 LGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHY 415

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           A ++D+LGRAG   +A   ++ MP +   ++WGALLGA++++KN E+G +AA+ +F ++P
Sbjct: 416 ATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDP 475

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
               TH LL+NIYASAG W++VAKVR+ MKD+ +KKEP  SW+EV++ V+ F   D +H 
Sbjct: 476 SYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHP 535

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           + ++I+   ++++  + + GYVP     L  V++ EKE  L +HSEKLA++F L+ TPPG
Sbjct: 536 QKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPG 595

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +TIR+ KN+R+C DCH++ +++S +V REIIVRD NRFHHF +G CSCG YW
Sbjct: 596 STIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 206/388 (53%), Gaps = 1/388 (0%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P+    ++++  C   G    G+ +H + +   +  D+   N+L+ MYA+ G+LE A 
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F ++ H D+VSW ++I G   ++    AL LF +M S    PN FT +S +K C  M 
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
               GRQ+H    K    S+  VG  LVDMYA+CG + EA ++F  +  KN ++WN +I+
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ + G   EA +LF  M REG    + T S +L S +S   +   K +HA  +K++ + 
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             Y+ N+L+  Y K G + DA K+F +   VD+V+C SM+  YAQ GLG+EA + + EM 
Sbjct: 310 VGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMI 369

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              I P+     S+L AC++    ++GK     + K+          ++V++  + G +D
Sbjct: 370 RFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLD 429

Query: 452 DADRAFSEIPDRGIVS-WSAMIGGLAQH 478
            A     E+P    V+ W A++G    H
Sbjct: 430 QAKSFIEEMPIEPTVAIWGALLGASKMH 457



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 192/366 (52%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK CT    L  G  VH  V+ + F  D  + NSL+ MYA+CG+   +RRLFD +P R 
Sbjct: 80  LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRD 139

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW S+ + Y   D   +A+  F  M+  G  PNEF+LSS++  C        GR+IH 
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K G  S++F  ++LVDMYA+ G L +A+ VF  +   + VSWNA+IAG       + 
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M+     P  FTY++ L +C+ M   E G+ LH  L+K   K    VG  L+ 
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLH 319

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+ +A  +F  + + ++++ N ++ G+ Q+G   EAA  F  M R G+  +  T
Sbjct: 320 MYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDIT 379

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +  + +   K    L  K   E       +++D  G+ G ++ A    +E  
Sbjct: 380 FLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMP 439

Query: 361 AVDLVA 366
               VA
Sbjct: 440 IEPTVA 445


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 237/571 (41%), Positives = 365/571 (63%)

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
           +  L+ CA  +   +G+  H   I   + +D +    L+++Y KCG  D AR++F +M  
Sbjct: 61  SQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHV 120

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           +++++WN +I+G+  +G D++A  LF  M+REG    + TLS+ + + A+  AI  CKQ+
Sbjct: 121 RSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQL 180

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           H +++K A +S+ ++  +++D Y KC  ++DA  +F++     LV  +S+   Y Q GL 
Sbjct: 181 HTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLH 240

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           EEAL L+   Q   +    F  S++L+ACA+L+   +G Q+H  I+K GF  + F   SL
Sbjct: 241 EEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASL 300

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V++YA+CG I+ A   F+ +  + +V W+AMI   ++H    EA+ +F +M + G+ PN 
Sbjct: 301 VDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNE 360

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T +SVL  C+HAGLV + +H+F  +     ++P   HY+CM+D+LGR+GK  EA EL++
Sbjct: 361 VTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLN 420

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            MPF+  AS+WG+LLG+ R Y N+ + + AAE LF +EP+    HVLLSN+YA++G W+N
Sbjct: 421 KMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWEN 480

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V   R+++KD+  KKE G SWIE K KV+ F VG+R H R  +IY KL+E+   + K   
Sbjct: 481 VLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFAR 540

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
              +E DLHDV   +KE+LL HHSEKLA++FGLI+ P    I + KNLRIC DCH+  + 
Sbjct: 541 RTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKI 600

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + I  R +IVRD NRFHHF++GSCSCG +W
Sbjct: 601 AAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 210/422 (49%), Gaps = 16/422 (3%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           ++S  +  CA     L+G+  HG +I  G  +D  + N L+++Y K G  + A  VF  +
Sbjct: 59  AISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIM 118

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
               IVSWN +IAG      +  ALKLF +M     + + FT +S + ACA        +
Sbjct: 119 HVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECK 178

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           QLH   +K+ + S+  VG  ++D+YAKC  + +A  +F  MPE+ L+ W+ + +G++QNG
Sbjct: 179 QLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNG 238

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA  LF    REGV   + TLS +L + AS        Q+HA+ +K  F  + ++  
Sbjct: 239 LHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAA 298

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SL+D Y +CG +E A  +F      ++V   +MI ++++     EA+ L+ +MQ   I P
Sbjct: 299 SLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFP 358

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL-----VNMYAKCGSIDD 452
           +     S+L+ C++    E+G+    H         T   N L     V++  + G  D+
Sbjct: 359 NEVTYLSVLSVCSHAGLVEKGR----HYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDE 414

Query: 453 ADRAFSEIPDRGIVS-WSAMIGGLAQHGRGK----EALQMFGQMLEDGVLPNHITLVSVL 507
           A    +++P     S W +++G    +   +     A Q+F    ++G   NH+ L +V 
Sbjct: 415 AWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNG--GNHVLLSNVY 472

Query: 508 CA 509
            A
Sbjct: 473 AA 474



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 191/360 (53%), Gaps = 5/360 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+ C  +K L +G   HG+ +  G  +D    N L+ +Y KCG    +R +FD +  RS+
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ + Y H     +A+  F  M   G   +EF+LSS I ACA        +++H  
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++KL  DS+ F   A++D+YAK   ++DA  VF+ +    +V+W+++ AG V +  ++ A
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF+  +   +    FT ++ L ACA + LK  G QLH  ++K     +  V   LVD+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YA+CG +++A  +F  M  KN++ WN +I+   ++    EA  LF  M + G+  ++ T 
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363

Query: 302 STVLKSVASFQAIGVCKQVHALSV---KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            +VL SV S   + V K  H  S+       E +    + ++D  G+ G  ++A ++  +
Sbjct: 364 LSVL-SVCSHAGL-VEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNK 421



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 159/285 (55%), Gaps = 5/285 (1%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC +K  +    Q+H I +    DS+ FV  +++ +YAKC    D+  +F+ +PER++V+
Sbjct: 167 ACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVT 226

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           W+SLF+ YV     EEA+  F+     G+   EF+LS++++ACA     + G ++H   +
Sbjct: 227 WSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVIL 286

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K G+  + F A +LVD+YA+ G +E A A+F  +EH ++V WNA+IA    H H+  A+ 
Sbjct: 287 KCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMI 346

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV--GVGLVDM 241
           LF++M+   I PN  TY S L  C+   L E GR  + SL+  +   +P V     +VD+
Sbjct: 347 LFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRH-YFSLLMSDRTVEPNVLHYSCMVDV 405

Query: 242 YAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASL 285
             + G  DEA  + + MP E     W  ++ G  +N  ++  A +
Sbjct: 406 LGRSGKTDEAWELLNKMPFEPTASMWGSLL-GSCRNYNNIRLARI 449



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 138/281 (49%), Gaps = 2/281 (0%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D + +S  L+  A  +++ V K  H L++     +D    N LI+ Y KCG  + A  +F
Sbjct: 56  DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                  +V+  +MI  Y   G   +ALKL+  M     +   F  SS + ACA   A  
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           + KQ+H   +K    S++F G +++++YAKC  I DA   F ++P+R +V+WS++  G  
Sbjct: 176 ECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYV 235

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G  +EAL +F     +GV     TL ++L AC    L  E      ++  K G     
Sbjct: 236 QNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGI-QLHAVILKCGFHGNF 294

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              A ++D+  R G+ ++A  L   M  + N  +W A++ +
Sbjct: 295 FVAASLVDVYARCGQIEKAYALFAYMEHK-NVVIWNAMIAS 334



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 6/176 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S      G+Q+H +++  GF  + FVA SLV +YA+CG    +  LF  +  ++
Sbjct: 265 ILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKN 324

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WN++ + +       EA+  F++M   GI PNE +  S+++ C+ +G    GR  H 
Sbjct: 325 VVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGR--HY 382

Query: 121 YSIKLG---YDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
           +S+ +     + ++   + +VD+  + G  ++A  +   +   P    W +++  C
Sbjct: 383 FSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSC 438


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/568 (43%), Positives = 360/568 (63%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+ CA        +  H  +I+++++ D  +   L++ Y+KCG ++ AR +F  M E++L
Sbjct: 68  LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I  + +N  + EA  +F  M  EG  F + T+S+VL +         CK++H L
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           SVKT  + + Y+  +L+D Y KCG ++DAV++F+       V  +SM+  Y Q    EEA
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L LY   Q   +  + F  SS++ AC+NL+A  +GKQ+H  I K GF S+ F  +S V+M
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCGS+ ++   FSE+ ++ +  W+ +I G A+H R KE + +F +M +DG+ PN +T 
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF 367

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
            S+L  C H GLV E +  F+ M   +G+ P   HY+CM+DILGRAG   EA EL+ ++P
Sbjct: 368 SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
           F   AS+WG+LL + R+YKN+E+ + AAE LF +EPE +  HVLLSNIYA+   W+ +AK
Sbjct: 428 FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 487

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
            R+ ++D  +KK  G SWI++KDKV+TF+VG+  H R +EI + LD +     K GY P 
Sbjct: 488 SRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPS 547

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
           VE +LHDVE  +KE+LL  HSEKLA+ FGL+  P  + +R+ KNLRICVDCH   +  S 
Sbjct: 548 VEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASM 607

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              R IIVRDVNRFHHF +G CSCG +W
Sbjct: 608 ATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 200/359 (55%), Gaps = 3/359 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C     +      HG ++    + D  + N L+  Y+KCG    +R++FD + ERS
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++   Y       EA+  F EM   G + +EF++SS+++AC  + D+L  +K+H 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K   D +++   AL+D+YAK G ++DAV VF+ ++    V+W++++AG V +++ + 
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+++ +   +  N FT +S + AC+ +     G+Q+H  + K    S+  V    VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ E+ +IF  + EKNL  WN +ISG  ++    E   LF  M ++G+  ++ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFK 357
            S++L        +   ++   L ++T +     +V  + ++D  G+ G + +A ++ K
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 207/396 (52%), Gaps = 8/396 (2%)

Query: 85  KEMVLSGIRPNEFSLSSMINA----CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDM 140
           +E V  G   NEFS  ++++     CA +G  +  +  HG  I++  + D+   N L++ 
Sbjct: 46  QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           Y+K G +E A  VF  +    +VSWN +I     +     AL +F +M++     + FT 
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165

Query: 201 TSALKACAGMELKELG-RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +S L AC G+    L  ++LHC  +K  I  +  VG  L+D+YAKCG + +A  +F  M 
Sbjct: 166 SSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           +K+ + W+ +++G++QN    EA  L+    R  +  +Q TLS+V+ + ++  A+   KQ
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HA+  K+ F S+ ++ +S +D Y KCG + ++  IF E    +L    ++I+ +A+   
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGN 438
            +E + L+ +MQ   ++P+    SSLL+ C +    E+G++   +    +G   +    +
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404

Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
            +V++  + G + +A      IP D     W +++ 
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 16/339 (4%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++  +  +L+  A   A+   K  H   ++   E D  ++N LI+AY KCG VE A ++F
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA-NLSAY 415
                  LV+  +MI  Y +  +  EAL ++LEM++       F  SS+L+AC  N  A 
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E  K++H   +K     + + G +L+++YAKCG I DA + F  + D+  V+WS+M+ G 
Sbjct: 180 E-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQP 534
            Q+   +EAL ++ +     +  N  TL SV+CAC N A L+   + H    +  FG   
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEM 593
                A  +D+  + G  +E+  +   +  + N  +W  ++ G A+  +  EV      M
Sbjct: 299 FVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEV------M 349

Query: 594 LFAIEPEKSSTH---VLLSNIYASAGMWDNVAKVRRFMK 629
           +   + ++   H   V  S++ +  G    V + RRF K
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/657 (39%), Positives = 390/657 (59%), Gaps = 5/657 (0%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   +  G   + F    LV+  + +G +  A  +F +  +PD+  WNA+I     + 
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ--LHCSLIKMEIKSDPIV 234
                +++++ M+ + ++P+ FT+   LKAC   EL + G    +H  +IK    SD  V
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACT--ELLDFGLSCIIHGQIIKYGFGSDVFV 191

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             GLV +YAKCG +  A+++F  +  + +++W  +ISG+ QNG  +EA  +F  M   GV
Sbjct: 192 QNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGV 251

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   L ++L++      +   + +H   +K   E +  ++ SL   Y KCG V  A  
Sbjct: 252 KPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKS 311

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            F +    +++   +MI+ YA+ G  EEA+ L+  M  R I PDS    S + A A + +
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGS 371

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            E  + +  ++ K  + SD F   SL++MYAKCGS++ A R F    D+ +V WSAMI G
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG+G EA+ ++  M + GV PN +T + +L ACNH+GLV E    F  M K F I P
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVP 490

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHY+C++D+LGRAG   EA   +  +P +   SVWGALL A +IY+ V +G++AA  L
Sbjct: 491 RNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKL 550

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F+++P  +  +V LSN+YAS+ +WD VA VR  M++  L K+ G S IE+  K+  F VG
Sbjct: 551 FSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVG 610

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D+SH  +KEI+ +L  +   L + G+VP  E+ LHD+   EKE+ L  HSE++AVA+GLI
Sbjct: 611 DKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLI 670

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T PG T+R+ KNLR CV+CH++ + ISK+V REIIVRD NRFHHF++G CSCG YW
Sbjct: 671 STAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 235/458 (51%), Gaps = 1/458 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  +V +G   + F+   LV   +  G    +R+LFD      V  WN++   Y   +
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
              + V  ++ M  +G+ P+ F+   ++ AC    D  L   IHG  IK G+ SD+F  N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            LV +YAK G++  A  VF  + H  IVSW ++I+G   +     AL++F QM+++ + P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +     S L+A   ++  E GR +H  +IKM ++ +P + + L   YAKCG +  A+  F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M   N+I WN +ISG+ +NG   EA +LF +M    +  D  T+ + + + A   ++ 
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + + +     K+ + SD ++  SLID Y KCG VE A ++F  +S  D+V  ++MI  Y 
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYG 433

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G EA+ LY  M+   + P+      LL AC +    ++G ++   +  F  +    
Sbjct: 434 LHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNE 493

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
             + +V++  + G + +A     +IP + G+  W A++
Sbjct: 494 HYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALL 531



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 169/307 (55%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT   D  L   +HG ++  GF SD FV N LV +YAKCG+   ++ +FD +  R+
Sbjct: 160 VLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRT 219

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW S+ S Y       EA+  F +M  +G++P+  +L S++ A     D   GR IHG
Sbjct: 220 IVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHG 279

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK+G + +     +L   YAK G +  A + F  ++  +++ WNA+I+G   + H + 
Sbjct: 280 FVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEE 339

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF  M S  I P+  T  SA+ A A +   EL + +   + K    SD  V   L+D
Sbjct: 340 AVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLID 399

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS++ AR +F    +K+++ W+ +I G+  +G   EA +L+  M + GV  +  T
Sbjct: 400 MYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVT 459

Query: 301 LSTVLKS 307
              +L +
Sbjct: 460 FIGLLTA 466



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 1/273 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+A T   DL  G  +HG V+  G + +  +  SL   YAKCG    ++  FD +   +
Sbjct: 261 ILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTN 320

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+ WN++ S Y      EEAV  F  M+   I+P+  ++ S + A A  G   L + +  
Sbjct: 321 VIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDD 380

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K  Y SD+F   +L+DMYAK G++E A  VF      D+V W+A+I G  LH     
Sbjct: 381 YVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWE 440

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ L+  MK + + PN  T+   L AC    L + G +L   +   EI         +VD
Sbjct: 441 AINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVD 500

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +  + G + EA      +P E  +  W  ++S 
Sbjct: 501 LLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/684 (39%), Positives = 398/684 (58%), Gaps = 6/684 (0%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDA 150
           I P    L S++ +   +  S+LGR IH + I+        F +N LV+MY+K+  L  A
Sbjct: 3   IHPQNL-LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSA 61

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             V        +V+W ++I+GCV +     AL  F  M+   + PN FT+    KA A +
Sbjct: 62  QHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFV 121

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
           ++   G+Q+H   +K  +  D  VG    DMY K G   +A  +F  MP++NL  WN  I
Sbjct: 122 QIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI 181

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S  +Q+   ++A   F          +  T    L +      + + +Q+HA  V+  ++
Sbjct: 182 SNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYK 241

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            D  + N LID YGKCG +  A  +F    +  ++V+  SM+ A  Q    E A  ++L+
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ 301

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
            + +E+ P  F+ SS+L+ACA L   E G+ VH   +K     + F G++LV+MY KCGS
Sbjct: 302 AR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGS 360

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML--EDGVLPNHITLVSVL 507
           I++A++ FSE+P+R +V+W+AMIGG A  G    AL++F +M     G+ P+++TL+S+L
Sbjct: 361 IENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISIL 420

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
             C+  G V      FESM   +GI+P  EH+AC++D+LGR+G    A E +  M  Q  
Sbjct: 421 SVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPT 480

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
            SVWGALLGA R++   E+G+ AAE LF ++   S  HV+LSN+ ASAG W+    VR+ 
Sbjct: 481 ISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKE 540

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MKD  +KK  G SWI VK++++ F   D SH R+ EI A L ++   + +AGYVP     
Sbjct: 541 MKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLS 600

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           L D+E+ EK   +++HSEK+A+AFGLIA P G  IR+ KNLRIC DCH++ +FIS+IV R
Sbjct: 601 LFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGR 660

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EIIVRD +RFH F++G CSC  YW
Sbjct: 661 EIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 258/518 (49%), Gaps = 15/518 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS-DEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L++  S     LG  +H  ++ T       F++N LV MY+K      ++ +      R
Sbjct: 12  LLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLR 71

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W SL S  VH      A+  F  M    ++PN+F+   +  A A     + G++IH
Sbjct: 72  TVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIH 131

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G ++K G   D+F   +  DMY K G   DA  +F ++   ++ +WNA I+  V    + 
Sbjct: 132 GLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSL 191

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+  F++       PN  T+ + L AC  M    LGRQLH  +++   K D  V  GL+
Sbjct: 192 DAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLI 251

Query: 240 DMYAKCGSMDEARMIFHLM-PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D Y KCG +  A M+F+ +   KN+++W  +++  +QN  +  A  +F    R+ V    
Sbjct: 252 DFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVF-LQARKEVEPTD 310

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +S+VL + A    + + + VHAL+VK   E + ++ ++L+D YGKCG +E+A ++F E
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSE 370

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ--DREINPDSFVCSSLLNACANLSAYE 416
               +LV   +MI  YA  G  + AL+L+ EM      I P      S+L+ C+ + A E
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430

Query: 417 QGKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGG 474
           +G Q+   + + +G          +V++  + G +D A      +  +  +S W A++G 
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGA 490

Query: 475 LAQHGR---GKEALQMFGQM--LEDGVLPNHITLVSVL 507
              HG+   GK A +   ++  ++ G   NH+ L ++L
Sbjct: 491 CRMHGKTELGKIAAEKLFELDHVDSG---NHVVLSNML 525


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/809 (32%), Positives = 438/809 (54%), Gaps = 74/809 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK CT   D++LG+++HG ++  GFD D ++  +L+  Y +C     + ++F  +P    
Sbjct: 140 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEA 199

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           + WN      +  + L++ V  F++M  S ++    ++  ++ AC   G     ++IHGY
Sbjct: 200 LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGY 259

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH---------------------- 159
             + G DSD+   N L+ MY+K G LE A  VF  +E+                      
Sbjct: 260 VFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDA 319

Query: 160 -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                        PDIV+WN +++G  LH + +  L + Q+M+     PN  + TS L+A
Sbjct: 320 WSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQA 379

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
            + +    +G++ H  +++     D  VG  L+DMY K  S+  A+ +F  M  +N+ AW
Sbjct: 380 ISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAW 439

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N ++SG+   G   +A  L   M +EG+  D  T                          
Sbjct: 440 NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW------------------------- 474

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL----VACTSMITAYAQFGLGEE 382
                     N +I  Y   G  ++A+ +  ++ ++ L    V+ T++I+  +Q G   +
Sbjct: 475 ----------NGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRD 524

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           +LK + +MQ   + P+S   + LL ACA+LS  ++GK++H   I+ GF+ D F   +L++
Sbjct: 525 SLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALID 584

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY+K  S+ +A + F  I ++ + SW+ MI G A  G GKEA+ +F +M + GV P+ IT
Sbjct: 585 MYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAIT 644

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
             ++L AC ++GL+ E   +F+SM   + I P  EHY CM+D+LGRAG   EA +L+ TM
Sbjct: 645 FTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTM 704

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           P + +A++WGALLG+ RI+KN++  + AA+ LF +EP  S+ ++L+ N+Y+    W+++ 
Sbjct: 705 PLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMD 764

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            +R  M    ++     SWI++  +V+ F+  ++ H  + +IY +L ++   + K GYVP
Sbjct: 765 HLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVP 824

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
            V     +++E EK+++L  H+EKLA+ +GLI    G  IRV KN RIC DCH++ ++IS
Sbjct: 825 DVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYIS 884

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + +RE+ +RD  RFHHFR G CSC  +W
Sbjct: 885 LVKARELFLRDGVRFHHFREGKCSCNDFW 913



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 247/525 (47%), Gaps = 76/525 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC     L    Q+HG V   G DSD  + N L+ MY+K G    +RR+FD++  R+
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFF---------------------------KEMVLS--- 90
             SWNS+ S Y    FL +A   F                           KE VL+   
Sbjct: 300 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 359

Query: 91  -----GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
                G +PN  S++S++ A +  G   +G++ HGY ++ G+D D++   +L+DMY K  
Sbjct: 360 RMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 419

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +L  A AVF ++++ +I +WN++++G       + AL+L  QM+   I P++ T+     
Sbjct: 420 SLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN---- 475

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH----LMPEK 261
                                          G++  YA  G   EA  + H    L    
Sbjct: 476 -------------------------------GMISGYAMWGCGKEALAVLHQTKSLGLTP 504

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           N+++W  +ISG  Q G + ++   F  M +EGV  +  +++ +L++ AS   +   K++H
Sbjct: 505 NVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIH 564

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
            LS++  F  D ++  +LID Y K   +++A K+F+      L +   MI  +A FGLG+
Sbjct: 565 CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 624

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSL 440
           EA+ ++ EMQ   + PD+   ++LL+AC N     +G K     I  +  +        +
Sbjct: 625 EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM 684

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEA 484
           V++  + G +D+A      +P +   + W A++G    H   K A
Sbjct: 685 VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFA 729



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 217/489 (44%), Gaps = 48/489 (9%)

Query: 116 RKIHGYSIKL--GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI---- 169
           + +H   IKL   ++ D  + N L+  Y   G+   A  VF      + + WN+ +    
Sbjct: 50  KMMHAQMIKLPQKWNPDAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFK 108

Query: 170 -AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
            +   LH      L++F+++    +  +   Y+ ALK C  +    LG ++H  LIK   
Sbjct: 109 SSAGSLHI----VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGF 164

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
             D  +   L++ Y +C  +++A  +FH MP    + WN  I  +LQ+    +   LF  
Sbjct: 165 DLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRK 224

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M    +  +  T+  VL++     A+   KQ+H    +   +SD  + N LI  Y K G 
Sbjct: 225 MQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGK 284

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVC---- 402
           +E A ++F      +  +  SMI++YA  G   +A  L+ E++  ++ PD  ++ C    
Sbjct: 285 LELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSG 344

Query: 403 -----------------------------SSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
                                        +S+L A + L     GK+ H ++++ GF  D
Sbjct: 345 HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCD 404

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            + G SL++MY K  S+  A   F  + +R I +W++++ G +  G  ++AL++  QM +
Sbjct: 405 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 464

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           +G+ P+ +T   ++      G   EA        K  G+ P    +  +I    +AG  +
Sbjct: 465 EGIKPDLVTWNGMISGYAMWGCGKEALAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNR 523

Query: 554 EAMELVDTM 562
           ++++    M
Sbjct: 524 DSLKFFAQM 532


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/701 (37%), Positives = 418/701 (59%), Gaps = 13/701 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA--NSLVVMYAKCGNFIDSRRLFDAIPE 58
           VL+ C  K  +     VHG+V+ + F+  + +   N    +Y+KC  F  +  +FD +P+
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+V SW  +           +   FF EM+ SGI P++F+ S++I +C G     LG+ +
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +  G+ + +F + +L++MYAK+G++ED+  VF  +   + VSWNA+I+GC  +  +
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A  LF +MK+    PNM+T  S  KA   +    +G+++     ++ I+ + +VG  L
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLI------AWNIVISGHLQNGGDMEAASLFPWMYRE 292
           +DMY+KCGS+ +AR +F    + N I       WN +ISG+ Q+G   EA  L+  M + 
Sbjct: 364 IDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQN 419

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI-DAYGKCGHVED 351
           G+  D  T  +V  ++A+ +++   + VH + +K   +     VN+ I DAY KCG +ED
Sbjct: 420 GITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLED 479

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
             K+F      D+V+ T+++TAY+Q  LGEEAL  +  M++    P+ F  SS+L +CA+
Sbjct: 480 VRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCAS 539

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L   E G+QVH  + K G  ++    ++L++MYAKCGSI +A + F +I +  IVSW+A+
Sbjct: 540 LCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAI 599

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G AQHG  ++ALQ+F +M   G+  N +TL+ VL AC+H G+V E   +F+ ME  +G
Sbjct: 600 ISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYG 659

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           + P  EHYAC+ID+LGR G+  +AME +  MP + N  VW  LLG  R++ NVE+G+ AA
Sbjct: 660 VVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAA 719

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             + +I PE S+T+VLLSN Y   G +++   +R  MKD  +KKEPG SWI VK +V+ F
Sbjct: 720 RKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKF 779

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
             GD+ H + KEIY KL+E+ + +   GYVP +   L++ +
Sbjct: 780 YSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVLNNAD 820



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 141/312 (45%), Gaps = 14/312 (4%)

Query: 292 EGVGFDQTTLST-------VLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDA 342
           E +G  +T   T       VL+  A   +I   K VH L +K+ FE  D +V  N     
Sbjct: 105 ESIGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHV 164

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y KC     A  +F E    ++ + T MI    + GL  +  K + EM +  I PD F  
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S+++ +C  L + E GK VH  I+  GF +  F   SL+NMYAK GSI+D+   F+ + +
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
              VSW+AMI G   +G   EA  +F +M      PN  TLVSV  A      V   K  
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK-E 343

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV-WGALLGAARIY 581
            ++   + GI+        +ID+  + G   +A  + DT       +  W A++     Y
Sbjct: 344 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG---Y 400

Query: 582 KNVEVGQHAAEM 593
                 Q A E+
Sbjct: 401 SQSGCSQEALEL 412


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/699 (37%), Positives = 422/699 (60%), Gaps = 1/699 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK C+  +D  LG+Q+HGI V  GFD D    ++LV MYAKC +  DS  +F  +P+++ 
Sbjct: 164 LKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNW 223

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +SW++  +  V  D L   +  FKEM   GI  ++ + +S+  +CAG   S LG ++H +
Sbjct: 224 ISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCH 283

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K  + SD+    A +DMYAK  N+ DA  +F  +   ++ S+NA+I G   +E    A
Sbjct: 284 ALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQA 343

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            KLF Q++ +  + +  + + AL A A ++    G QLH   IK  + S+  V   ++DM
Sbjct: 344 FKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDM 403

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCG++ EA  +F  M  ++ ++WN +I+   QN  + +  S F  M R  +  D+ T 
Sbjct: 404 YGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTY 463

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +VLK+ A  +A     +VH   +K+      ++ ++L+D Y KCG +E+A KI      
Sbjct: 464 GSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEE 523

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             +V+  ++I+ ++     E++ + +  M +  + PD+F  +++L+ CANL+    GKQ+
Sbjct: 524 QTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQI 583

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  +IK   +SD +  ++LV+MY+KCG++ D+   F + P R  V+W+AMI G A HG G
Sbjct: 584 HAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLG 643

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           +EAL++F  ML + + PNH T VSVL AC+H G   +   +F+ M   + ++P  EHY+C
Sbjct: 644 EEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSC 703

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           M+DILGR+G+ +EA+ L+  MPF+A+A +W  LL   +I  NVEV + AA  L  ++PE 
Sbjct: 704 MVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPED 763

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           SS + LLSNIYA AGMW  V+K+R+ M+ + LKKEPG SWIEVKD+V+TF V D++H + 
Sbjct: 764 SSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKC 823

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVET-DLHDVEESEKEQL 699
           + IY+ LD +   + ++G  P ++T  + +VEE+  +++
Sbjct: 824 EMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEENRHQKV 862



 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 187/609 (30%), Positives = 329/609 (54%), Gaps = 38/609 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + C++++ L  G + H  ++ +GF    FV N L+ MY KC     + ++F+ +P+R 
Sbjct: 30  IFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRD 89

Query: 61  --------------------------------VVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
                                           VVSWNSL S Y+    +++++  F +M 
Sbjct: 90  IVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMR 149

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G+  +  +L+  +  C+   D +LG +IHG ++++G+D D+ + +ALVDMYAK  +LE
Sbjct: 150 DLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLE 209

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           D++ VF ++   + +SW+A IAGCV ++     LKLF++M+   I  +  TY S  ++CA
Sbjct: 210 DSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCA 269

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G+    LG QLHC  +K +  SD IVG   +DMYAKC +M +A  +F L+P+ NL ++N 
Sbjct: 270 GLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNA 329

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G+ +N    +A  LF  + +    FD+ +LS  L + A  +      Q+H L++K+ 
Sbjct: 330 MIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSN 389

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+  + N+++D YGKCG + +A  +F E    D V+  ++ITA  Q     + L  + 
Sbjct: 390 LSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFG 449

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M   ++ PD F   S+L ACA   A+  G +VH  IIK G     F G++LV+MY+KCG
Sbjct: 450 AMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCG 509

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +++A++    + ++ +VSW+A+I G +   + +++ + F  MLE GV P++ T  +VL 
Sbjct: 510 MMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLD 569

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQA 566
            C +   V   K     M K   ++ + + Y  + ++D+  + G   +++ +    P + 
Sbjct: 570 TCANLATVGLGKQIHAQMIK---LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KR 625

Query: 567 NASVWGALL 575
           ++  W A++
Sbjct: 626 DSVTWNAMI 634



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 256/480 (53%), Gaps = 14/480 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V ++C       LG Q+H   + T F SD  V  + + MYAKC N  D+ +LF  +P+ +
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + S+N++   Y   +   +A   F ++  +    +E SLS  ++A A       G ++HG
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHG 383

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK    S++  ANA++DMY K G L +A  +F ++E  D VSWNA+I  C  +E    
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK 443

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L  F  M  S++ P+ FTY S LKACAG      G ++H  +IK  +     VG  LVD
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVD 503

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG M+EA  I + + E+ +++WN +ISG        ++   F  M   GV  D  T
Sbjct: 504 MYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFT 563

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +TVL + A+   +G+ KQ+HA  +K    SD YI ++L+D Y KCG++ D++ +F+++ 
Sbjct: 564 YATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP 623

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   +MI  +A  GLGEEAL+L+  M    I P+     S+L AC+++   ++G  
Sbjct: 624 KRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKG-- 681

Query: 421 VHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
               +  F  M+  +A        + +V++  + G +++A R   ++P +   + W  ++
Sbjct: 682 ----LFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLL 737



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 265/548 (48%), Gaps = 42/548 (7%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + S +   C+       G++ H + I  G+   +F  N L+ MY K   LE A  VF+++
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 158 EHPDIVSWNAVIAGCV--------------LHEHND---W---------------ALKLF 185
              DIVSWN ++ GC               +  H D   W               ++ +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            +M+   +  +  T   +LK C+ +E + LG Q+H   ++M    D + G  LVDMYAKC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
            S++++  +F  +P+KN I+W+  I+G +QN   +    LF  M R+G+G  Q+T ++V 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           +S A   A  +  Q+H  ++KT F SD  +  + +D Y KC ++ DA K+F      +L 
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           +  +MI  YA+   G +A KL+L++Q    + D    S  L+A A +  + +G Q+H   
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK    S+    N++++MY KCG++ +A   F E+  R  VSW+A+I    Q+    + L
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445

Query: 486 QMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
             FG ML   + P+  T  SVL AC          + H   ++   G++      + ++D
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG--SALVD 503

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ----HAAEMLFAIEPE 600
           +  + G  +EA ++   +  Q   S W A++    + K  E  Q    H  EM   +EP+
Sbjct: 504 MYSKCGMMEEAEKIHYRLEEQTMVS-WNAIISGFSLQKKSEDSQRFFSHMLEM--GVEPD 560

Query: 601 KSSTHVLL 608
             +   +L
Sbjct: 561 NFTYATVL 568


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/741 (36%), Positives = 420/741 (56%), Gaps = 33/741 (4%)

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           +NSL   Y       EA+  F  M+ SGI P++++    ++ACA S     G +IHG  +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K+GY  D+F  N+LV  YA+ G L+ A  VF ++   ++VSW ++I G    +    A+ 
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 184 LFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           LF +M +  E+ PN  T    + ACA +E  E G +++  +    I+ + ++   LVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
            KC ++D A+ +F      NL   N + S +++ G   EA  +F  M   GV  D+ ++ 
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           + + S +  + I   K  H   ++  FES D I N+LID Y KC   + A +IF   S  
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401

Query: 363 DLVACTSMITAYAQFG-------------------------------LGEEALKLYLEMQ 391
            +V   S++  Y + G                               L EEA++++  MQ
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461

Query: 392 DRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
            +E +N D     S+ +AC +L A +  K ++ +I K G   D   G +LV+M+++CG  
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + A   F+ + +R + +W+A IG +A  G  + A+++F  M+E G+ P+ +  V  L AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +H GLV + K  F SM K  G+ P   HY CM+D+LGRAG  +EA++L++ MP + N  +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W +LL A R+  NVE+  +AAE +  + PE++ ++VLLSN+YASAG W+++AKVR  MK+
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             L+K PG S I+++ K + FT GD SH     I A LDEVS   +  G+VP +   L D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V+E EK  +L  HSEKLA+A+GLI++  G TIR+ KNLR+C DCH+  +F SK+ +REII
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           +RD NRFH+ R G CSCG +W
Sbjct: 822 LRDNNRFHYIRQGKCSCGDFW 842



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 33/391 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC   +DL  G +V+  +  +G + ++ + ++LV MY KC     ++RLFD     +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +   N++ S YV      EA+  F  M+ SG+RP+  S+ S I++C+   + L G+  HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y ++ G++S     NAL+DMY K    + A  +F  + +  +V+WN+++AG V       
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421

Query: 174 -------LHEHN--DW---------------ALKLFQQMKSSE-INPNMFTYTSALKACA 208
                  + E N   W               A+++F  M+S E +N +  T  S   AC 
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +L + ++  + K  I+ D  +G  LVDM+++CG  + A  IF+ +  +++ AW  
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT- 327
            I      G    A  LF  M  +G+  D       L + +    +   K++    +K  
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
               +D     ++D  G+ G +E+AV++ ++
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/683 (37%), Positives = 404/683 (59%), Gaps = 14/683 (2%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +++ C   G     R +HG+  K G  +DMF A +LV+ Y + G   DA  +F  +   +
Sbjct: 84  LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERN 143

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +V+W A++ G  L+      L++F +M      P+ +T  + L AC      +LG+Q+H 
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK   +S   +G  L  +YAK GS+D A   F  +PEKN+I W  +IS   ++   +E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 282 AA-SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
              SLF  M  +GV  ++ TL++V+    +   + + KQV A S K   E++  + NS +
Sbjct: 264 LGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLE 389
             Y + G  ++A+++F++     ++   +MI+ YAQ              G +AL ++ +
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           ++   + PD F  SS+L+ C+ + A EQG+Q+H   IK GF+SD    ++LVNMY KCG 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I DA++AF E+P R  V+W++MI G +QHG+ +EA+Q+F +M   GV PN IT VS+L A
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C++AGLV EA+H+F+ M+K++ I+P+ +HY CMID+  R G+ ++A   +    F+ N +
Sbjct: 504 CSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEA 563

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W +L+   R + N+E+  +AA+ L  ++P+   T++LL N+Y S   W +VA+VR+ MK
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMK 623

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              +      SWI +KDKVY F   DR+H ++ E+Y  L+ + +     GY P    +L 
Sbjct: 624 QEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELS 683

Query: 690 DVEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           D E+ EK     L HHSE+LAVA GL+ TPPGAT+RV KN+ +C DCH+S +  S + +R
Sbjct: 684 DSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENR 743

Query: 748 EIIVRDVNRFHHFRNGSCSCGGY 770
           EIIVRD  R H F++G CSCG +
Sbjct: 744 EIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 264/511 (51%), Gaps = 22/511 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C     L     VHG +  TG  +D FVA SLV  Y +CG   D+RRLFD +PER+
Sbjct: 84  LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERN 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L + Y         +  F EM+  G  P+ ++L + +NAC  S D  LG+++HG
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-D 179
           Y+IK G +S     N+L  +YAK+G+L+ A+  F  I   ++++W  +I+ C   E   +
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L LF  M    + PN FT TS +  C       LG+Q+     K+  +++  V    +
Sbjct: 264 LGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPW 288
            +Y + G  DEA  +F  M + ++I WN +ISG+ Q                +A ++F  
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           + R  +  D  T S++L   ++  A+   +Q+HA ++K+ F SD  + ++L++ Y KCG 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           ++DA K F E      V  TSMI+ Y+Q G  +EA++L+ EM+   + P+     SLL+A
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI- 465
           C+     E+ +  +  ++K  +  +    +   +++M+ + G ++D   AFS I   G  
Sbjct: 504 CSYAGLVEEAEH-YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED---AFSFIKRTGFE 559

Query: 466 ---VSWSAMIGGLAQHGRGKEALQMFGQMLE 493
                WS+++ G   HG  + A     ++LE
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADKLLE 590



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 192/456 (42%), Gaps = 64/456 (14%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   L  C  M      R +H  + K    +D  V   LV+ Y +CG+  +AR +F  MP
Sbjct: 81  YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+N++ W  +++G+  N        +F  M   G      TL   L +  +   + + KQ
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VH  ++K   ES   + NSL   Y K G ++ A++ F      +++  T+MI+A A+   
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAE--- 257

Query: 380 GEE----ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
            EE     L L+++M    + P+ F  +S+++ C        GKQV     K G  ++  
Sbjct: 258 DEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP 317

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ-----------HGRGKEA 484
             NS + +Y + G  D+A R F ++ D  I++W+AMI G AQ             RG +A
Sbjct: 318 VKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQA 377

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCAC---------------------------------- 510
           L +F  +    + P+  T  S+L  C                                  
Sbjct: 378 LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNM 437

Query: 511 -NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF---QA 566
            N  G + +A   F  M  +  +      +  MI    + G+ QEA++L + M     + 
Sbjct: 438 YNKCGCIQDANKAFLEMPTRTFVT-----WTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEML---FAIEP 599
           N   + +LL A      VE  +H  +M+   + IEP
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEP 528



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 143/294 (48%), Gaps = 4/294 (1%)

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M  EG          +L       ++G  + VH    KT   +D ++  SL++AY +CG 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
             DA ++F      ++V  T+++T Y         L++++EM +    P  +   + LNA
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C      + GKQVH + IK+G  S T  GNSL ++YAK GS+D A RAF  IP++ +++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 469 SAMIGGLAQHGRGKE-ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           + MI   A+     E  L +F  ML DGV+PN  TL SV+  C    L        ++  
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCG-TRLDLNLGKQVQAFS 307

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARI 580
            K G +         + +  R G+  EAM L + M   A+   W A++ G A+I
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME-DASIITWNAMISGYAQI 360


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/574 (41%), Positives = 366/574 (63%), Gaps = 2/574 (0%)

Query: 200  YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
            Y S L  C        G+++H  +IK   +    +   L+ +Y KC  + +AR +   MP
Sbjct: 480  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539

Query: 260  EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            E+N+++W  +ISG+ Q G   EA  LF  M   G   ++ T +TVL S  S     + +Q
Sbjct: 540  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599

Query: 320  VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
            +H+L +KT+FES  ++ +SL+D Y K G + +A ++F      D+V+CT++I+ YAQ GL
Sbjct: 600  IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659

Query: 380  GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
             EEAL L+  +Q   +  +    +S+L A + L+A + G+QVH H+++          NS
Sbjct: 660  DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719

Query: 440  LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLP 498
            L++MY+KCGS+  + R F  +P+R ++SW+AM+ G ++HG G+EA+++F  M E+  V P
Sbjct: 720  LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 779

Query: 499  NHITLVSVLCACNHAGLVAEAKHHF-ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            + +T ++VL  C+H G+       F E + +K G +P  EHY C++D+ GRAG+ +EA E
Sbjct: 780  DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 839

Query: 558  LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
             +  MPF+  A++WG+LLGA R+++NV +G+  A  L  IE E +  +V+LSN+YASAG 
Sbjct: 840  FIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGR 899

Query: 618  WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
            WD+V  VR  MK+  + KEPG SWIE+   ++TF   DRSH R +E++AK+ E+S  + +
Sbjct: 900  WDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKE 959

Query: 678  AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            AGYVP +   L+DV++ +KE++L  HSEKLA+AFGLI TP G  +R+ KNLRICVDCH  
Sbjct: 960  AGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNF 1019

Query: 738  FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +F+S++  RE+ +RD NRFHH   G+CSCG YW
Sbjct: 1020 AKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 223/417 (53%), Gaps = 9/417 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S+  +  G +VH  ++ T ++   ++   L+V+Y KC    D+RR+ D +PER+
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y    +  EA+  F EM++SG  PNEF+ ++++ +C  S    LGR+IH 
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK  ++S +F  ++L+DMYAK G + +A  VF  +   D+VS  A+I+G      ++ 
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++++   +  N  TY S L A +G+   + GRQ+H  +++ ++    ++   L+D
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCGS+  +R IF  MPE+ +I+WN ++ G+ ++G   EA  LF  M  E  V  D  
Sbjct: 723 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 782

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T   VL   S    +  G+      ++ K  FE +      ++D +G+ G VE+A +  K
Sbjct: 783 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 842

Query: 358 ----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
               E +A    +       +    +GE   +  LE++    N  ++V  S L A A
Sbjct: 843 KMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE--NAGNYVILSNLYASA 897



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 210/397 (52%), Gaps = 4/397 (1%)

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           EM + G+        S++  C        G+++H + IK  Y+  ++    L+ +Y K  
Sbjct: 467 EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            L DA  V  ++   ++VSW A+I+G     +   AL LF +M  S   PN FT+ + L 
Sbjct: 527 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           +C      +LGRQ+H  +IK   +S   VG  L+DMYAK G + EAR +F  +PE+++++
Sbjct: 587 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 646

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
              +ISG+ Q G D EA  LF  + REG+  +  T ++VL +++   A+   +QVH+  +
Sbjct: 647 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 706

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           +        + NSLID Y KCG +  + +IF       +++  +M+  Y++ GLG EA++
Sbjct: 707 RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 766

Query: 386 LY-LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVN 442
           L+ L  ++ ++ PDS    ++L+ C++    ++G ++   ++  K GF  +      +V+
Sbjct: 767 LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVD 826

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           ++ + G +++A     ++P     + W +++G    H
Sbjct: 827 LFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 181/352 (51%), Gaps = 12/352 (3%)

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           +G+  +     +VL    S  AI   ++VHA  +KT +E   Y+   LI  Y KC  + D
Sbjct: 471 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 530

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A ++  E    ++V+ T+MI+ Y+Q G   EAL L++EM      P+ F  +++L +C +
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 590

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
            S ++ G+Q+H  +IK  F S  F G+SL++MYAK G I +A R F  +P+R +VS +A+
Sbjct: 591 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 650

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKF 530
           I G AQ G  +EAL +F ++  +G+  N++T  SVL A +    +   +  H   +  K 
Sbjct: 651 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 710

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
               + ++   +ID+  + G    +  + D+MP +   S W A+L     Y    +G+ A
Sbjct: 711 PFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMPERTVIS-WNAMLVG---YSKHGLGREA 764

Query: 591 AEMLFAIEPEK-----SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            E+   ++ E      S T + + +  +  GM D   ++   M + K   EP
Sbjct: 765 VELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/574 (41%), Positives = 366/574 (63%), Gaps = 2/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y S L  C        G+++H  +IK   +    +   L+ +Y KC  + +AR +   MP
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+N+++W  +ISG+ Q G   EA  LF  M   G   ++ T +TVL S  S     + +Q
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H+L +KT+FES  ++ +SL+D Y K G + +A ++F      D+V+CT++I+ YAQ GL
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL L+  +Q   +  +    +S+L A + L+A + G+QVH H+++          NS
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLP 498
           L++MY+KCGS+  + R F  +P+R ++SW+AM+ G ++HG G+EA+++F  M E+  V P
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 312

Query: 499 NHITLVSVLCACNHAGLVAEAKHHF-ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           + +T ++VL  C+H G+       F E + +K G +P  EHY C++D+ GRAG+ +EA E
Sbjct: 313 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 372

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MPF+  A++WG+LLGA R+++NV +G+  A  L  IE E +  +V+LSN+YASAG 
Sbjct: 373 FIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGR 432

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           WD+V  VR  MK+  + KEPG SWIE+   ++TF   DRSH R +E++AK+ E+S  + +
Sbjct: 433 WDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKE 492

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGYVP +   L+DV++ +KE++L  HSEKLA+AFGLI TP G  +R+ KNLRICVDCH  
Sbjct: 493 AGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNF 552

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +F+S++  RE+ +RD NRFHH   G+CSCG YW
Sbjct: 553 AKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 223/417 (53%), Gaps = 9/417 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S+  +  G +VH  ++ T ++   ++   L+V+Y KC    D+RR+ D +PER+
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y    +  EA+  F EM++SG  PNEF+ ++++ +C  S    LGR+IH 
Sbjct: 76  VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK  ++S +F  ++L+DMYAK G + +A  VF  +   D+VS  A+I+G      ++ 
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++++   +  N  TY S L A +G+   + GRQ+H  +++ ++    ++   L+D
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCGS+  +R IF  MPE+ +I+WN ++ G+ ++G   EA  LF  M  E  V  D  
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 315

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T   VL   S    +  G+      ++ K  FE +      ++D +G+ G VE+A +  K
Sbjct: 316 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 375

Query: 358 ----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
               E +A    +       +    +GE   +  LE++    N  ++V  S L A A
Sbjct: 376 KMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE--NAGNYVILSNLYASA 430



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 205/382 (53%), Gaps = 4/382 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S++  C        G+++H + IK  Y+  ++    L+ +Y K   L DA  V  ++   
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+I+G     +   AL LF +M  S   PN FT+ + L +C      +LGRQ+H
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             +IK   +S   VG  L+DMYAK G + EAR +F  +PE+++++   +ISG+ Q G D 
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  LF  + REG+  +  T ++VL +++   A+   +QVH+  ++        + NSLI
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDS 399
           D Y KCG +  + +IF       +++  +M+  Y++ GLG EA++L+ L  ++ ++ PDS
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
               ++L+ C++    ++G ++   ++  K GF  +      +V+++ + G +++A    
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374

Query: 458 SEIPDRGIVS-WSAMIGGLAQH 478
            ++P     + W +++G    H
Sbjct: 375 KKMPFEPTAAIWGSLLGACRVH 396



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 181/352 (51%), Gaps = 12/352 (3%)

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           +G+  +     +VL    S  AI   ++VHA  +KT +E   Y+   LI  Y KC  + D
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A ++  E    ++V+ T+MI+ Y+Q G   EAL L++EM      P+ F  +++L +C +
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
            S ++ G+Q+H  +IK  F S  F G+SL++MYAK G I +A R F  +P+R +VS +A+
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKF 530
           I G AQ G  +EAL +F ++  +G+  N++T  SVL A +    +   +  H   +  K 
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 243

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
               + ++   +ID+  + G    +  + D+MP +   S W A+L     Y    +G+ A
Sbjct: 244 PFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMPERTVIS-WNAMLVG---YSKHGLGREA 297

Query: 591 AEMLFAIEPEK-----SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            E+   ++ E      S T + + +  +  GM D   ++   M + K   EP
Sbjct: 298 VELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 349


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/730 (35%), Positives = 435/730 (59%), Gaps = 11/730 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C S ++   GLQV   V+ +G  +   VANSL+ M+   G   D+ +LFD + E  
Sbjct: 151 VVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHD 210

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S N++ S Y H     +    F +M   G+RP+  +L S+++ CA +     G  IH 
Sbjct: 211 TISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHS 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++   DS +   NALV+MY+  G L DA  +F ++   D++SWN +I+  V + ++  
Sbjct: 271 LCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTD 330

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALK   Q+  +   PN  T++SAL AC+       G+ +H  ++++ ++ + +VG  L+ 
Sbjct: 331 ALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLIT 390

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH--LQNGGDMEAASLFPWMYREGVGFDQ 298
           MY KC SM++A  +F  MP  +++++N++I G+  L++G   +A  +F W+   G+  + 
Sbjct: 391 MYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDG--TKAMQVFSWIRSAGIKPNY 448

Query: 299 TTLSTVLKSVASFQAI-GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T+  +  S  S   +    + +HA  ++T F SD+Y+ NSLI  Y KCG++E +  IF 
Sbjct: 449 ITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFN 508

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             +  ++V+  ++I A AQ G GEEALKL+++MQ      D    +  L++CA+L++ E+
Sbjct: 509 SITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEE 568

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS---WSAMIGG 474
           G Q+H   +K G  SD++  N+ ++MY KCG +++       +PD+ I     W+ +I G
Sbjct: 569 GMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEM---LQMVPDQAIRPQQCWNTLISG 625

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A++G  KEA + F QM+  G  P+++T V++L AC+HAGLV +   ++ SM   FG+ P
Sbjct: 626 YAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSP 685

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             +H  C++D+LGR G+F EA   ++ MP   N  +W +LL ++R +KN+E+G+ AA+ L
Sbjct: 686 GIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKL 745

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             ++P   S +VLLSN+YA+   W +V K+R  MK   + K P  SW+++K++V TF +G
Sbjct: 746 LELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIG 805

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           DR H  +++IYAKLDE+   L + GY+    + LHD +E +KEQ L++HSEKLA+A+GLI
Sbjct: 806 DRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865

Query: 715 ATPPGATIRV 724
             P G+T ++
Sbjct: 866 VVPEGSTCQM 875



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 302/605 (49%), Gaps = 17/605 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G  +H +    G   + ++  +L+ +Y   G   D+RRLF  +PER+VVSW +L      
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
             +LEE +  +++M   G+  N  + +++++ C    + + G ++  + I  G  + +  
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKS 190
           AN+L+ M+  +G ++DA  +F  +E  D +S NA+I+   ++ H     K   +F  M+ 
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMIS---MYSHQGICSKCFLVFSDMRH 239

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             + P+  T  S +  CA  +    G  +H   ++  + S   V   LV+MY+  G + +
Sbjct: 240 HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F  M  ++LI+WN +IS ++QN    +A      ++      +  T S+ L + +S
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSS 359

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
             A+   K VHA+ ++ + + +  + NSLI  YGKC  +EDA K+F+     D+V+   +
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVL 419

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA----YEQGKQVHVHII 426
           I  YA    G +A++++  ++   I P+     +++N   + ++    +  G+ +H +II
Sbjct: 420 IGGYAVLEDGTKAMQVFSWIRSAGIKPNYI---TMINIHGSFTSSNDLHNYGRPLHAYII 476

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           + GF+SD +  NSL+ MYAKCG+++ +   F+ I ++ IVSW+A+I   AQ G G+EAL+
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALK 536

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F  M   G   + + L   L +C     + E       +  K G+          +D+ 
Sbjct: 537 LFIDMQHAGNKLDRVCLAECLSSCASLASLEEGM-QLHGLGMKSGLDSDSYVVNAAMDMY 595

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI--EPEKSST 604
           G+ GK  E +++V     +     W  L+     Y   +  +   + + A+  +P+  + 
Sbjct: 596 GKCGKMNEMLQMVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTF 654

Query: 605 HVLLS 609
             LLS
Sbjct: 655 VALLS 659



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 264/547 (48%), Gaps = 20/547 (3%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS--- 112
           +P+R+  +W +  S  V C     A    + M   G+  + F+L+S++ AC   G     
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             G  IH  + + G   +++   AL+ +Y   G + DA  +F ++   ++VSW A++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             + + +  L+ ++QM+   +  N   + + +  C  +E +  G Q+   +I   +++  
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+ M+   G + +A  +F  M E + I+ N +IS +   G   +   +F  M   
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D TTL +++   AS         +H+L ++++ +S   ++N+L++ Y   G + DA
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F   S  DL++  +MI++Y Q     +ALK   ++      P+    SS L AC++ 
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A   GK VH  +++     +   GNSL+ MY KC S++DA++ F  +P   +VS++ +I
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLI 420

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHFESMEKKFG 531
           GG A    G +A+Q+F  +   G+ PN+IT++++     H    +    H++      + 
Sbjct: 421 GGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINI-----HGSFTSSNDLHNYGRPLHAYI 475

Query: 532 IQP--MQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           I+   + + Y    +I +  + G  + +  + +++    N   W A++ A     N ++G
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NAQLG 529

Query: 588 QHAAEML 594
            H  E L
Sbjct: 530 -HGEEAL 535



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 210/455 (46%), Gaps = 9/455 (1%)

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLH 220
           +W   ++GCV    +  A +L + M+   +  + F   S + AC      E    G  +H
Sbjct: 8   TWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 67

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
               +  +  +  +G  L+ +Y   G + +AR +F  MPE+N+++W  ++     NG   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLE 127

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           E    +  M REGV  +    +TV+    S +      QV +  + +  ++   + NSLI
Sbjct: 128 ETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLI 187

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             +G  G V+DA K+F      D ++  +MI+ Y+  G+  +   ++ +M+   + PD+ 
Sbjct: 188 TMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 247

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
              SL++ CA+   +  G  +H   ++    S     N+LVNMY+  G + DA+  F  +
Sbjct: 248 TLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R ++SW+ MI    Q+    +AL+  GQ+     +PNH+T  S L AC+  G + + K
Sbjct: 308 SRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGK 367

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
               ++  +  +Q        +I + G+    ++A ++  +MP     S +  L+G    
Sbjct: 368 -MVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS-YNVLIGG--- 422

Query: 581 YKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYAS 614
           Y  +E G  A ++   I        ++ + NI+ S
Sbjct: 423 YAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGS 457


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 263/661 (39%), Positives = 385/661 (58%), Gaps = 3/661 (0%)

Query: 114 LGRKIHGYSIK-LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           LGR +H   +K L      F AN L++MY+K+ + E A  V +     ++VSW ++I+G 
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             + H   AL  F +M+   + PN FT+  A KA A + L   G+Q+H   +K     D 
Sbjct: 84  AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG    DMY K    D+AR +F  +PE+NL  WN  IS  + +G   EA   F    R 
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
               +  T    L + + +  + +  Q+H L +++ F++D  + N LID YGKC  +  +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             IF E    + V+  S++ AY Q    E+A  LYL  +   +    F+ SS+L+ACA +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +  E G+ +H H +K       F G++LV+MY KCG I+D+++AF E+P++ +V+ +++I
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383

Query: 473 GGLAQHGRGKEALQMFGQMLEDGV--LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           GG A  G+   AL +F +M   G    PN++T VS+L AC+ AG V      F+SM   +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           GI+P  EHY+C++D+LGRAG  + A E +  MP Q   SVWGAL  A R++   ++G  A
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           AE LF ++P+ S  HVLLSN +A+AG W     VR  +K   +KK  G SWI VK++V+ 
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 563

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           F   DRSH  +KEI   L ++ + +  AGY P ++  L+D+EE EK   + HHSEKLA+A
Sbjct: 564 FQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALA 623

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGL++ P    IR+ KNLRIC DCH+ F+F+S  V REIIVRD NRFH F++G CSC  Y
Sbjct: 624 FGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDY 683

Query: 771 W 771
           W
Sbjct: 684 W 684



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 163/549 (29%), Positives = 265/549 (48%), Gaps = 29/549 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE--FVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +LK   S   + LG  VH  +V T  DS    F+AN L+ MY+K  +   +R +    P 
Sbjct: 12  LLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+VVSW SL S          A+  F EM   G+ PN+F+      A A     + G++I
Sbjct: 71  RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K G   D+F   +  DMY K    +DA  +F +I   ++ +WNA I+  V     
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A++ F + +  + +PN  T+ + L AC+      LG QLH  +++    +D  V  GL
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y KC  +  + +IF  M  KN ++W  +++ ++QN  D +A+ L+    ++ V    
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +S+VL + A    + + + +HA +VK   E   ++ ++L+D YGKCG +ED+ + F E
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD----SFVCSSLLNACANLSA 414
               +LV   S+I  YA  G  + AL L+ EM  R   P     +FV  SLL+AC+   A
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV--SLLSACSRAGA 428

Query: 415 YEQGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
            E G ++      F  M  T+         + +V+M  + G ++ A     ++P +  +S
Sbjct: 429 VENGMKI------FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482

Query: 468 -WSAMIGGLAQHGRGKEALQMFGQM--LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
            W A+      HG+ +  L     +  L+     NH+ L +   A   AG  AEA    E
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA---AGRWAEANTVRE 539

Query: 525 SMEKKFGIQ 533
            + K  GI+
Sbjct: 540 EL-KGVGIK 547


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/683 (37%), Positives = 404/683 (59%), Gaps = 14/683 (2%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +++ C  +G     R +HG+  K G  +DMF A +LV+ Y +     DA  +F  +   +
Sbjct: 84  LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +V+W A++ G  L+      L++F +M      P+ +T  + L AC      +LG+Q+H 
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK   +S   +G  L  +YAK GS+D A   F  +PEKN+I W  +IS   ++   +E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 282 -AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
              SLF  M  +GV  ++ TL++V+    +   + + KQV A S K   E++  + NS +
Sbjct: 264 LGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLE 389
             Y + G  ++A+++F++     ++   +MI+ YAQ              G +AL ++ +
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           ++   + PD F  SS+L+ C+ + A EQG+Q+H   IK GF+SD    ++LVNMY KCG 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I DA++AF E+P R  V+W++MI G +QHG+ +EA+Q+F +M   GV PN IT VS+L A
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C++AGLV EA+H+F+ M+K++ I+P+ +HY CMID+  R G+ ++A   +    F+ N +
Sbjct: 504 CSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEA 563

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W +L+   R + N+E+  +AA+ L  ++P+   T++LL N+Y S   W +VA+VR+ MK
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMK 623

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              +      SWI +KDKVY F   DR+H ++ E+Y  L+ + +     GY P    +L 
Sbjct: 624 QEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELS 683

Query: 690 DVEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           D E+ EK     L HHSE+LAVA GL+ TPPGAT+RV KN+ +C DCH+S +  S + +R
Sbjct: 684 DSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENR 743

Query: 748 EIIVRDVNRFHHFRNGSCSCGGY 770
           EIIVRD  R H F++G CSCG +
Sbjct: 744 EIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 263/511 (51%), Gaps = 22/511 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C     L     VHG +  TG  +D FVA SLV  Y +C    D+RRLFD +PER+
Sbjct: 84  LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L + Y         +  F EM+  G  P+ ++L + +NAC  S D  LG+++HG
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-D 179
           Y+IK G +S     N+L  +YAK+G+L+ A+  F  I   ++++W  +I+ C   E   +
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             + LF  M    + PN FT TS +  C       LG+Q+     K+  +++  V    +
Sbjct: 264 LGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPW 288
            +Y + G  DEA  +F  M + ++I WN +ISG+ Q                +A ++F  
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           + R  +  D  T S++L   ++  A+   +Q+HA ++K+ F SD  + ++L++ Y KCG 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           ++DA K F E      V  TSMI+ Y+Q G  +EA++L+ EM+   + P+     SLL+A
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI- 465
           C+     E+ +  +  ++K  +  +    +   +++M+ + G ++D   AFS I   G  
Sbjct: 504 CSYAGLVEEAEH-YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED---AFSFIKRTGFE 559

Query: 466 ---VSWSAMIGGLAQHGRGKEALQMFGQMLE 493
                WS+++ G   HG  + A     ++LE
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADKLLE 590



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 194/458 (42%), Gaps = 68/458 (14%)

Query: 200 YTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           Y   L  C  +E   LG  R +H  + K    +D  V   LV+ Y +C +  +AR +F  
Sbjct: 81  YVPLLHRC--VETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDG 138

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MPE+N++ W  +++G+  N        +F  M   G      TL   L +  +   + + 
Sbjct: 139 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLG 198

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQVH  ++K   ES   + NSL   Y K G ++ A++ F      +++  T+MI+A A+ 
Sbjct: 199 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAE- 257

Query: 378 GLGEE----ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
              EE     + L+++M    + P+ F  +S+++ C        GKQV     K G  ++
Sbjct: 258 --DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETN 315

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ-----------HGRGK 482
               NS + +Y + G  D+A R F ++ D  I++W+AMI G AQ             RG 
Sbjct: 316 LPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF 375

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCAC-------------------------------- 510
           +AL +F  +    + P+  T  S+L  C                                
Sbjct: 376 QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALV 435

Query: 511 ---NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF--- 564
              N  G + +A   F  M  +  +      +  MI    + G+ QEA++L + M     
Sbjct: 436 NMYNKCGCIQDANKAFLEMPTRTFVT-----WTSMISGYSQHGQPQEAIQLFEEMRLAGV 490

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEML---FAIEP 599
           + N   + +LL A      VE  +H  +M+   + IEP
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEP 528



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 149/313 (47%), Gaps = 12/313 (3%)

Query: 277 GGDMEAASLFPW-------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           GG MEA  L P        M  EG          +L       ++G  + VH    KT  
Sbjct: 51  GGGMEAP-LRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGA 109

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
            +D ++  SL++AY +C    DA ++F      ++V  T+++T Y         L++++E
Sbjct: 110 SADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVE 169

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M +    P  +   + LNAC      + GKQVH + IK+G  S T  GNSL ++YAK GS
Sbjct: 170 MLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGS 229

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE-ALQMFGQMLEDGVLPNHITLVSVLC 508
           +D A RAF  IP++ +++W+ MI   A+     E  + +F  ML DGV+PN  TL SV+ 
Sbjct: 230 LDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMS 289

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
            C    L        ++   K G +         + +  R G+  EAM L + M   A+ 
Sbjct: 290 LCG-TRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME-DASI 347

Query: 569 SVWGALL-GAARI 580
             W A++ G A+I
Sbjct: 348 ITWNAMISGYAQI 360


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 250/576 (43%), Positives = 371/576 (64%), Gaps = 1/576 (0%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N   Y +AL+ C   +    G+ LHC ++K     D      L++MY K   + +A  +F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MPE+N I++  +I G+ ++   +EA  LF  ++RE V  +Q T ++VL++ A+ + + 
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLN 155

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           +  Q+H   +K    SD ++ N+L+D Y KCG +E+++++F ES   + V   ++I  + 
Sbjct: 156 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV 215

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q G GE+AL+L+L M +  +       SS L ACA+L+A E G Q+H   +K  F  D  
Sbjct: 216 QLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIV 275

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             N+L++MYAKCGSI DA   F  +  +  VSW+AMI G + HG G+EAL++F +M E  
Sbjct: 276 VTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETE 335

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V P+ +T V VL AC +AGL+ + + +F SM +  GI+P  EHY CM+ +LGR G   +A
Sbjct: 336 VKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKA 395

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
           ++L+D +PFQ +  VW ALLGA  I+ ++E+G+ +A+ +  +EP+  +THVLLSN+YA+A
Sbjct: 396 VKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATA 455

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
             WDNVA VR+ MK   +KKEPG+SWIE +  V++FTVGD SH   + I   L+ +    
Sbjct: 456 KRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKT 515

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            KAGY+P     L DVE+ EKE+LL+ HSE+LA++FG+I TP G+ IR+ KNLRICVDCH
Sbjct: 516 KKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCH 575

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + + ISK+V REI+VRD+NRFHHF+ G CSCG YW
Sbjct: 576 AAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 213/392 (54%), Gaps = 6/392 (1%)

Query: 92  IRPNEFSLSSMINA---CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           + P+EF+  +  NA   C    +   G+ +H   +K G   D+F+ N L++MY K   L 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA  +F ++   + +S+  +I G         A++LF ++   E+ PN FT+ S L+ACA
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACA 149

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            ME   LG Q+HC +IK+ + SD  V   L+D+YAKCG M+ +  +F   P +N + WN 
Sbjct: 150 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNT 209

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           VI GH+Q G   +A  LF  M    V   + T S+ L++ AS  A+    Q+H+L+VKT 
Sbjct: 210 VIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTT 269

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F+ D  + N+LID Y KCG ++DA  +F   +  D V+  +MI+ Y+  GLG EAL+++ 
Sbjct: 270 FDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFD 329

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKC 447
           +MQ+ E+ PD      +L+ACAN    +QG+     +I+  G          +V +  + 
Sbjct: 330 KMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRG 389

Query: 448 GSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           G +D A +   EIP    ++ W A++G    H
Sbjct: 390 GHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 194/364 (53%), Gaps = 14/364 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+ C  K +   G  +H  ++  G   D F  N L+ MY K     D+ +LFD +PER+ 
Sbjct: 45  LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +S+ +L   Y       EA+  F  +    + PN+F+ +S++ ACA      LG +IH +
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCH 163

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            IK+G  SD+F +NAL+D+YAK G +E+++ +F +  H + V+WN VI G V     + A
Sbjct: 164 VIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKA 223

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+LF  M    +     TY+SAL+ACA +   E G Q+H   +K     D +V   L+DM
Sbjct: 224 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDM 283

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCGS+ +AR++F LM +++ ++WN +ISG+  +G   EA  +F  M    V  D+ T 
Sbjct: 284 YAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTF 343

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY-------GKCGHVEDAVK 354
             VL + A+    G+  Q  A          D+ +   I+ Y       G+ GH++ AVK
Sbjct: 344 VGVLSACAN---AGLLDQGQAYFTSMI---QDHGIEPCIEHYTCMVWLLGRGGHLDKAVK 397

Query: 355 IFKE 358
           +  E
Sbjct: 398 LIDE 401



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 154/273 (56%), Gaps = 4/273 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC + + L LG Q+H  V+  G  SD FV+N+L+ +YAKCG   +S  LF   P R+
Sbjct: 144 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN 203

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WN++   +V     E+A+  F  M+   ++  E + SS + ACA       G +IH 
Sbjct: 204 DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHS 263

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K  +D D+   NAL+DMYAK G+++DA  VF  +   D VSWNA+I+G  +H     
Sbjct: 264 LTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGRE 323

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           AL++F +M+ +E+ P+  T+   L ACA   L + G+    S+I+ +   +P +     +
Sbjct: 324 ALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ-DHGIEPCIEHYTCM 382

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           V +  + G +D+A  +   +P + +++ W  ++
Sbjct: 383 VWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/716 (36%), Positives = 408/716 (56%), Gaps = 42/716 (5%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  + L+ ++ A A SG   L R++         D ++F+ NAL+   A    L D   +
Sbjct: 43  PPTYVLNHLLTAYARSGRLPLARRL----FDAMPDPNLFTRNALLSALAHARLLPDMDRL 98

Query: 154 FKDIEHPDIVSWNAVIAG-------CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           F  +   D VS+NA+IAG                 L+    +  + + P+  T +  + A
Sbjct: 99  FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMA 158

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK---------------------- 244
            + +  + LGRQ+HC ++++   +       LVDMYAK                      
Sbjct: 159 ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMY 218

Query: 245 ---------CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                    C  ++EAR +F  M +++ I W  +++G  QNG   EA  +F  M  EGVG
Sbjct: 219 NTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVG 278

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            DQ T  ++L +  +  A    KQ+HA +++T ++ + ++ ++L+D Y KC  +  A  +
Sbjct: 279 IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV 338

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F+  +  ++++ T+MI  Y Q G GEEA++++ EMQ   I P+ F   S++++CANL++ 
Sbjct: 339 FRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASL 398

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E+G Q H   +  G        ++LV +Y KCGSI+DA R F E+P    VS++A++ G 
Sbjct: 399 EEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGY 458

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQ G+ KE + +F +ML  GV PN +T + VL AC+ +GLV +   +F SM++  GI  +
Sbjct: 459 AQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLL 518

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            +HY CMID+  R+G+ +EA E +  MP   +A  W  LL A R+  ++E+G+ AAE L 
Sbjct: 519 DDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLL 578

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
             +P+  +++VLL +++AS G W  VA +RR M+D ++KKEPG SWI+ K++V+ F+  D
Sbjct: 579 KTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADD 638

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           +SH  S  IY KL  ++  + + GY P V + LHDV ++EK  +L +HSEKLA+AFGLI 
Sbjct: 639 QSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIF 698

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            P    IRV KNLR+CVDCH + +FISKI  R+I+VRD  RFH F NG CSCG +W
Sbjct: 699 VPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 259/543 (47%), Gaps = 88/543 (16%)

Query: 17  VHGIVVFT-GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           VH +V+ T       +V N L+  YA+ G    +RRLFDA+P+ ++ + N+L S   H  
Sbjct: 31  VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90

Query: 76  FLEEAVCFF------------------------------------KEMVLSG--IRPNEF 97
            L +    F                                    +E V+ G  +RP+  
Sbjct: 91  LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           ++S M+ A +  GD  LGR++H   ++LG+ +  F+ + LVDMYAK+G + DA  VF ++
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210

Query: 158 EHPDIVSWNAVIAG---CVLHEHN-------------DW---------------ALKLFQ 186
              ++V +N +I G   C + E                W               AL +F+
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFR 270

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M++  +  + +T+ S L AC  +   E G+Q+H   I+     +  VG  LVDMY+KC 
Sbjct: 271 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCR 330

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           S+  A  +F  M  KN+I+W  +I G+ QNG   EA  +F  M  +G+  +  TL +V+ 
Sbjct: 331 SIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVIS 390

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S A+  ++    Q H +++ +       + ++L+  YGKCG +EDA ++F E    D V+
Sbjct: 391 SCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVS 450

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-------K 419
            T++++ YAQFG  +E + L+ +M  + + P+      +L+AC+     E+G       +
Sbjct: 451 YTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQ 510

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD---RAFSEIPDRGIVSWSAMIGGLA 476
           Q H  ++    + D +    ++++Y++ G + +A+   R     PD   + W+ ++    
Sbjct: 511 QDHGIVL----LDDHY--TCMIDLYSRSGRLKEAEEFIRQMPRCPD--AIGWATLLSACR 562

Query: 477 QHG 479
             G
Sbjct: 563 LRG 565



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 215/434 (49%), Gaps = 38/434 (8%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           A ++  D  LG QVH  ++  GF +  F  + LV MYAK G   D++R+FD +  ++VV 
Sbjct: 158 AASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVM 217

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMV----------LSGIRPN------------------ 95
           +N++ +  + C  +EEA   F+ MV          ++G+  N                  
Sbjct: 218 YNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGV 277

Query: 96  ---EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
              +++  S++ AC     S  G++IH Y+I+  YD ++F  +ALVDMY+K  ++  A A
Sbjct: 278 GIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEA 337

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF+ +   +I+SW A+I G   +   + A+++F +M++  I PN FT  S + +CA +  
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            E G Q HC  +   ++    V   LV +Y KCGS+++A  +F  MP  + +++  ++SG
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG 457

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI-GVCKQVHALSVKTAFES 331
           + Q G   E   LF  M  +GV  +  T   VL + +    +   C   H++        
Sbjct: 458 YAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL 517

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFG---LGEEALKLY 387
            D     +ID Y + G +++A +  ++     D +   ++++A    G   +G+ A +  
Sbjct: 518 LDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENL 577

Query: 388 LEMQDREINPDSFV 401
           L+   +  NP S+V
Sbjct: 578 LKTDPQ--NPASYV 589



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 206/454 (45%), Gaps = 76/454 (16%)

Query: 219 LHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS--GHLQ 275
           +HC +++      P   +  L+  YA+ G +  AR +F  MP+ NL   N ++S   H +
Sbjct: 31  VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90

Query: 276 NGGDMEAASLFPWM-YREGVGFD------------------------------------- 297
              DM+   LF  M  R+ V ++                                     
Sbjct: 91  LLPDMD--RLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPS 148

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + T+S ++ + ++     + +QVH   ++  F +  +  + L+D Y K G + DA ++F 
Sbjct: 149 RITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFD 208

Query: 358 E----------SSAVDLVAC---------------------TSMITAYAQFGLGEEALKL 386
           E          +    L+ C                     T+M+T   Q GL  EAL +
Sbjct: 209 EMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDV 268

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           +  M+   +  D +   S+L AC  L+A E+GKQ+H + I+  +  + F G++LV+MY+K
Sbjct: 269 FRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSK 328

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           C SI  A+  F  +  + I+SW+AMI G  Q+G G+EA+++F +M  DG+ PN  TL SV
Sbjct: 329 CRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSV 388

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           + +C +   + E    F  M    G++P     + ++ + G+ G  ++A  L D MPF  
Sbjct: 389 ISSCANLASLEEGA-QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHD 447

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLF-AIEP 599
             S    + G A+  K  E      +ML   ++P
Sbjct: 448 QVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKP 481



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +      G Q+H   + T +D + FV ++LV MY+KC +   +  +F  +  ++
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKN 346

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW ++   Y      EEAV  F EM   GI+PN+F+L S+I++CA       G + H 
Sbjct: 347 IISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHC 406

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  ++ALV +Y K G++EDA  +F ++   D VS+ A+++G         
Sbjct: 407 MALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKE 466

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M    + PN  T+   L AC+   L E G    CS      +   IV +    
Sbjct: 467 TIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKG----CSYFHSMQQDHGIVLLDDHY 522

Query: 238 --LVDMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDME 281
             ++D+Y++ G + EA      MP   + I W  ++S   +  GDME
Sbjct: 523 TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA-CRLRGDME 568


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 263/661 (39%), Positives = 384/661 (58%), Gaps = 3/661 (0%)

Query: 114 LGRKIHGYSIK-LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           LGR +H   +K L      F AN L++MY+K+ + E A  V +     ++VSW ++++G 
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGL 83

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             + H   AL  F +M+   + PN FT+    KA A + L   G+Q+H   +K     D 
Sbjct: 84  AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG    DMY K    D+AR +F  +PE+NL  WN  IS  + +G   EA   F    R 
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRI 203

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G   +  T    L + +    + +  Q+H L  ++ F++D  + N LID YGKC  +  +
Sbjct: 204 GGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSS 263

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             IF E    + V+  S++ AY Q    E+A  LYL  +   +    F+ SS+L+ACA +
Sbjct: 264 EIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGM 323

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +  E G+ +H H +K     + F G++LV+MY KCG I+D+++AF E+P++ +V+ +++I
Sbjct: 324 AGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLI 383

Query: 473 GGLAQHGRGKEALQMFGQMLEDGV--LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           GG A  G+   AL +F  M   G    PN++T VS+L AC+ AG V      F+SM+  +
Sbjct: 384 GGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTY 443

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           GI+P  EHY+C++D+LGRAG  ++A E +  MP +   SVWGAL  A R++    +G  A
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILA 503

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           AE LF ++P+ S  HVLLSN +A+AG W     VR  MK   +KK  G SWI VK++V+ 
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHA 563

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           F   DRSH  +KEI   L ++ + +  AGY P ++  L+D+EE EK   + HHSEKLA+A
Sbjct: 564 FQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALA 623

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGL+A P    IR+ KNLRIC DCH+ F+F+S  V REIIVRD NRFH F++G CSC  Y
Sbjct: 624 FGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDY 683

Query: 771 W 771
           W
Sbjct: 684 W 684



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/551 (29%), Positives = 265/551 (48%), Gaps = 33/551 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE--FVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +LK   S   + LG  VH  +V T  DS    F+AN L+ MY+K  +   +R +    P 
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+VVSW SL S          A+  F EM   G+ PN+F+   +  A A     + G++I
Sbjct: 71  RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K G   D+F   +  DMY K    +DA  +F +I   ++ +WNA I+  V     
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A++ F + +     PN  T+   L AC+   L +LG Q+H  + +    +D  V  GL
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D Y KC  +  + +IF  M  KN ++W  +++ ++QN  D +A+ L+    +E V    
Sbjct: 251 IDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSD 310

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +S+VL + A    + + + +HA +VK   E + ++ ++L+D YGKCG +ED+ + F E
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDE 370

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD----SFVCSSLLNACANLSA 414
               +LV   S+I  YA  G  + AL L+ +M  R   P     +FV  SLL+AC+   A
Sbjct: 371 MPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFV--SLLSACSRAGA 428

Query: 415 YEQGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
            E G ++      F  M  T+         + +V+M  + G ++ A     ++P +  +S
Sbjct: 429 VENGMKI------FDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTIS 482

Query: 468 -WSAMIGGLAQHGRGK----EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
            W A+      HG+       A  +F    +D    NH+ L +   A   AG  AEA   
Sbjct: 483 VWGALQNACRMHGKPHLGILAAENLFKLDPKDS--GNHVLLSNTFAA---AGRWAEANTV 537

Query: 523 FESMEKKFGIQ 533
            E M K  GI+
Sbjct: 538 REEM-KGVGIK 547


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/738 (36%), Positives = 419/738 (56%), Gaps = 2/738 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+++ M  + G    + ++F  +PER V SWN +   Y    FLEEA+  +  M+ +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
            RP+ ++   ++ +C G  D  +GR++H + ++ G   ++   NALV MYAK G++E A 
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D +SWNA+IAG   +   +  L+LF  M   E+ PN+ T TS   A   + 
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
             +  +++H   +K    +D      L+ MY+  G M EA  +F  M  ++ ++W  +IS
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ +NG   +A  ++  M    V  D  T+++ L + AS   + V  ++H L+    F  
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR 430

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + N+L++ Y K   +E A+++FK     D+++ +SMI  +       EAL  +  M 
Sbjct: 431 YIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML 490

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             ++ P+S    + L ACA   +   GK++H H+++ G  S+ +  N+L+++Y KCG   
Sbjct: 491 -ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTG 549

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F     + +VSW+ M+ G   HG G  AL  F +MLE G  P+ +T V++LC C+
Sbjct: 550 YAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCS 609

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
            AG+V++    F SM +K+ I P  +HYACM+D+L R G+  E    ++ MP   +A+VW
Sbjct: 610 RAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVW 669

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL   RI++N+E+G+ AA+++  +EP  +  HVLLS++YA AGMW  V+KVR+ M+  
Sbjct: 670 GALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVK 729

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L+ + G SW+EVK  ++ F   D SH + KEI   LD + + +  +G+ P+    L D 
Sbjct: 730 GLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLEDK 789

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           E S K+ +L  HSE+LAVAFGLI T PG +I V KN   C  CH     ISKIV REI V
Sbjct: 790 EVS-KDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITV 848

Query: 752 RDVNRFHHFRNGSCSCGG 769
           RD   FHHFR+GSCSCGG
Sbjct: 849 RDTKEFHHFRDGSCSCGG 866



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 271/546 (49%), Gaps = 14/546 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL++C    DL +G +VH  V+  G   +  V N+LV MYAKCG+   +R++FD +    
Sbjct: 201 VLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTD 260

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ + +      E  +  F  M+   + PN  +++S+  A     D    ++IH 
Sbjct: 261 CISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHA 320

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G+ +D+   N+L+ MY+ +G + +A  VF  +E  D +SW A+I+G   +   D 
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDK 380

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+++  M+ + ++P+  T  SAL ACA +   ++G +LH            +V   LV+
Sbjct: 381 ALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVE 440

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +++A  +F  MP+K++I+W+ +I+G   N  + EA   F  M  + V  +  T
Sbjct: 441 MYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVT 499

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  ++   K++HA  ++    S+ Y+ N+L+D Y KCG    A   F    
Sbjct: 500 FIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHG 559

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+   M+  +   G G+ AL  + EM +   +PD     +LL  C+      QG +
Sbjct: 560 TKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWE 619

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           + H    K+  + +      +V++ ++ G + +     + +P       W A++ G   H
Sbjct: 620 LFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIH 679

Query: 479 GRGKEALQMFGQMLEDGVLPN---HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
            R  E  ++  +++ + + PN   +  L+S L A   AG+ AE       + K   ++ +
Sbjct: 680 -RNIELGELAAKIVLE-LEPNDAGYHVLLSDLYA--DAGMWAEVS----KVRKTMRVKGL 731

Query: 536 QEHYAC 541
           +  Y C
Sbjct: 732 EHDYGC 737


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/683 (40%), Positives = 394/683 (57%), Gaps = 16/683 (2%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDI 157
           L++   +   S    LGR  H  +++L   +   F    LV++Y+K+     A A     
Sbjct: 18  LAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASD 77

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE-LG 216
            HP +VS+ A I+G   H     AL  F  M    + PN FT+ SA KA A    +  +G
Sbjct: 78  PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137

Query: 217 RQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
            Q+H   I+   +  DP V    +DMY K G +  AR +F  MP +N++AWN V++  + 
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA------IGVCKQVHALSVKTAF 329
           +G  +E    + +  RE  G     L  V+ + A F A      + + +Q H   VK  F
Sbjct: 198 DGRPLETIEAY-FGLREAGG-----LPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGF 251

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           E D  ++NS++D YGKC     A  +F      + V+  SM+ AYAQ G  EEA   YL 
Sbjct: 252 EMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLG 311

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
            +     P  F+ SS L  CA L     G+ +H   ++    ++ F  ++LV+MY KCG 
Sbjct: 312 ARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGC 371

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLC 508
           ++DA++ F E P R +V+W+AMIGG A  G  + AL +F  M+  G   PN+ITLV+V+ 
Sbjct: 372 VEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVIT 431

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           +C+  GL  +    FE+M ++FGI+P  EHYAC++D+LGRAG  ++A E++  MP + + 
Sbjct: 432 SCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSI 491

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           SVWGALLGA +++   E+G+ AAE LF ++P+ S  HVLLSN++ASAG W     +R+ M
Sbjct: 492 SVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEM 551

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K+  +KK+PG SW+  K+ V+ F   D  H    EI A L ++   +  AGY+P  +  L
Sbjct: 552 KNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSL 611

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           +D+EE EKE  ++ HSEKLA+AFGLI  PPG  IR+ KNLRICVDCH +F+FIS IV RE
Sbjct: 612 YDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGRE 671

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD NRFHHF+   CSCG YW
Sbjct: 672 IIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 253/512 (49%), Gaps = 15/512 (2%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+   LV +Y+K      +     + P  +VVS+ +  S          A+  F  M+  
Sbjct: 52  FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111

Query: 91  GIRPNEFSLSSMINACAGSGD-SLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLE 148
           G+RPN+F+  S   A A +   S +G +IH  +I+ GY   D F + A +DMY K G L+
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F ++ + ++V+WNAV+   VL       ++ +  ++ +   PN+ +  +   ACA
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G     LG Q H  ++K   + D  V   +VD Y KC    +AR +F  M  +N ++W  
Sbjct: 232 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 291

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +++ + QNG + EA + +    R G       +S+ L + A    + + + +HA++V++ 
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            +++ ++ ++L+D YGKCG VEDA +IF E+   +LV   +MI  YA  G  + AL ++ 
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411

Query: 389 EM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
           +M +  E  P+     +++ +C+     + G ++   +  +FG    T     +V++  +
Sbjct: 412 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 471

Query: 447 CGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGK----EALQMFGQMLEDGVLPNHI 501
            G  + A      +P R  +S W A++G    HG+ +     A ++F    +D    NH+
Sbjct: 472 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDS--GNHV 529

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            L ++  +   AG  AEA    + M K  GI+
Sbjct: 530 LLSNMFAS---AGRWAEATDIRKEM-KNVGIK 557



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 210/458 (45%), Gaps = 42/458 (9%)

Query: 13  LGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           +G Q+H + +  G+   D FV+ + + MY K G    +R LF  +P R+VV+WN++ +  
Sbjct: 136 IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 195

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V      E +  +  +  +G  PN  S  +  NACAG+    LG + HG+ +K G++ D+
Sbjct: 196 VLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDV 255

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
              N++VD Y K      A AVF  +   + VSW +++A    +   + A   +   + S
Sbjct: 256 SVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRS 315

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
              P  F  +SAL  CAG+    LGR LH   ++  I ++  V   LVDMY KCG +++A
Sbjct: 316 GEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDA 375

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVAS 310
             IF+  P++NL+ WN +I G+   G    A  +F  M R G    +  TL  V+ S + 
Sbjct: 376 EQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS- 434

Query: 311 FQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                          +     D Y +  ++ + +G    +E   + +  +  VDL+    
Sbjct: 435 ---------------RGGLTKDGYELFETMRERFG----IEPRTEHY--ACVVDLL---- 469

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
                 + G+ E+A   Y  +Q   + P   V  +LL AC      E G+   +   K  
Sbjct: 470 -----GRAGMEEQA---YEVIQGMPMRPSISVWGALLGACKMHGKTELGR---IAAEKLF 518

Query: 430 FMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
            +    +GN   L NM+A  G   +A     E+ + GI
Sbjct: 519 ELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGI 556



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 11/294 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
             AC     L LG Q HG VV  GF+ D  V NS+V  Y KC     +R +FD +  R+ 
Sbjct: 227 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 286

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW S+ + Y      EEA   +     SG  P +F +SS +  CAG     LGR +H  
Sbjct: 287 VSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAV 346

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           +++   D+++F A+ALVDMY K G +EDA  +F +    ++V+WNA+I G         A
Sbjct: 347 AVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNA 406

Query: 182 LKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSL---IKMEIKSDPIVGVG 237
           L +F  M +S E  PN  T  + + +C+   L + G +L  ++     +E +++    V 
Sbjct: 407 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACV- 465

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIA-WNIVISGHLQNG----GDMEAASLF 286
            VD+  + G  ++A  +   MP +  I+ W  ++     +G    G + A  LF
Sbjct: 466 -VDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLF 518


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/743 (36%), Positives = 421/743 (56%), Gaps = 31/743 (4%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           S+  +N L   Y      ++A+  + +M++ GI P++++   +++AC+       G ++H
Sbjct: 94  SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 153

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K+G + D+F +N+L+  YA+ G ++    +F  +   ++VSW ++I G    + + 
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSK 213

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ LF QM  + + PN  T    + ACA ++  ELG+++   + ++ ++   I+   LV
Sbjct: 214 EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALV 273

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KCG +  AR IF     KNL+ +N ++S ++ +    +   +   M ++G   D+ 
Sbjct: 274 DMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKV 333

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK----- 354
           T+ + + + A    + V K  HA  ++   E  D I N++ID Y KCG  E A K     
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393

Query: 355 --------------------------IFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
                                     IF E    DLV+  +MI A  Q  + EEA++L+ 
Sbjct: 394 PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFR 453

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           EMQ++ I  D      + +AC  L A +  K V  +I K     D   G +LV+M+++CG
Sbjct: 454 EMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCG 513

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
               A   F  +  R + +W+A IG +A  G  + A+++F +MLE  V P+ +  V++L 
Sbjct: 514 DPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLT 573

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H G V + +  F SMEK  GI+P   HY CM+D+LGRAG  +EA++L+ +MP + N 
Sbjct: 574 ACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPND 633

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            VWG+LL A R +KNVE+  +AAE L  + PE+   HVLLSNIYASAG W +VA+VR  M
Sbjct: 634 VVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQM 693

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K+  ++K PG S IEV+  ++ FT GD SHA +  I   L+E++  L++AGYVP     L
Sbjct: 694 KEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVL 753

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
            DV+E EKE LL  HSEKLA+A+GLI T  G  IRV KNLR+C DCH+  + +SK+ +RE
Sbjct: 754 LDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNRE 813

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           I VRD NR+H F+ G CSC  YW
Sbjct: 814 ITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 254/521 (48%), Gaps = 53/521 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC+    L  G+QVHG V+  G + D FV+NSL+  YA+CG     R+LFD + ER+
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN 195

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL + Y   D  +EAV  F +M  +G+ PN  ++  +I+ACA   D  LG+K+  
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCS 255

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +LG +      NALVDMY K G++  A  +F +  + ++V +N +++  V HE    
Sbjct: 256 YISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASD 315

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +  +M      P+  T  S + ACA +    +G+  H  +++  ++    +   ++D
Sbjct: 316 VLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIID 375

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM-------------------- 280
           MY KCG  + A  +F  MP K ++ WN +I+G +++ GDM                    
Sbjct: 376 MYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRD-GDMELAWRIFDEMLERDLVSWNT 434

Query: 281 ------------EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
                       EA  LF  M  +G+  D+ T+  +  +     A+ + K V     K  
Sbjct: 435 MIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKND 494

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
              D  +  +L+D + +CG    A+ +FK     D+ A T+ I   A  G  E A++L+ 
Sbjct: 495 IHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFN 554

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQ----------VHVHIIKFGFMSDTFAGN 438
           EM ++++ PD  V  +LL AC++  + +QG+Q          +  HI+ +G M       
Sbjct: 555 EMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCM------- 607

Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
             V++  + G +++A      +P +   V W +++    +H
Sbjct: 608 --VDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKH 646


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/685 (36%), Positives = 400/685 (58%), Gaps = 47/685 (6%)

Query: 134  ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             N L+++YAK  NLE A  +F++I   D+ SW  +I+G      +   L LF +M+   +
Sbjct: 324  GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383

Query: 194  NPNMFTYTSALKACAG-MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             PN FT +  LK+C+  +    +G+ +H  +++  +  D ++   ++D Y KC     A 
Sbjct: 384  CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443

Query: 253  MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW--------------- 288
             +F LM EK+ ++WNI++S +LQ G   ++  LF          W               
Sbjct: 444  KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503

Query: 289  -------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
                   M   G  F++ T S  L   +S   +G+ KQ+H   +K     D ++ NSLID
Sbjct: 504  ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563

Query: 342  AYGKCGHVEDAVKIFK----ESS-----------AVDLVACTSMITAYAQFGLGEEALKL 386
             Y KCG +E A  IFK    ESS            V+ V+ +SM++ Y Q G  E+ALK 
Sbjct: 564  MYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKT 623

Query: 387  YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
            +  M   ++  D F  +S+++ACA+    E G+QVH +I K G   D F G+S+++MY K
Sbjct: 624  FSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVK 683

Query: 447  CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
            CGS++DA   F++  DR +V W++MI G A HG+G+EA+++F  M+ +G+ PN ++ V V
Sbjct: 684  CGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGV 743

Query: 507  LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
            L AC+HAGL+ E   +F  M + +GI+P  EH+ CM+D+ GRAG+  E  E +       
Sbjct: 744  LTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISK 803

Query: 567  NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
             +SVW + L + R++KN+E+G    + L  +EP  +  ++L S+I A+   W+  AK+R 
Sbjct: 804  LSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRS 863

Query: 627  FMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
             M+   +KK P  SWI++K++V++F +GDRSH +  +IY+ LDE+   L + GY   V  
Sbjct: 864  LMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTP 923

Query: 687  DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
             + DVE+ +++ LL +HSEKLA+A+G+I+T PG  IRV KNLR+C+DCH   ++ S+++ 
Sbjct: 924  VMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLG 983

Query: 747  REIIVRDVNRFHHFRNGSCSCGGYW 771
            REII+RD++RFHHF++G CSC  YW
Sbjct: 984  REIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 234/468 (50%), Gaps = 48/468 (10%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
            N L+ +YAK  N   + ++F+ IP+  V SW  L S +       + +  F +M   G+
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383

Query: 93  RPNEFSLSSMINACAGS-GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK-------- 143
            PN+F+LS ++ +C+ +  DS +G+ IHG+ ++ G D D    N+++D Y K        
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443

Query: 144 -----------------------VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                  +G+++ +V +F+ +   D  SWN +I G + +     
Sbjct: 444 KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L  +M ++    N  T++ AL   + + +  LG+Q+H  ++K+ +  D  V   L+D
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563

Query: 241 MYAKCGSMDEARMIFHLMPEKN---------------LIAWNIVISGHLQNGGDMEAASL 285
           MY KCG M++A +IF  +P+++                ++W+ ++SG++QNG   +A   
Sbjct: 564 MYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKT 623

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F +M    V  D+ TL++V+ + AS   + + +QVH    K     D ++ +S+ID Y K
Sbjct: 624 FSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVK 683

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG + DA  IF ++   ++V  TSMI+  A  G G EA++L+  M +  I P+      +
Sbjct: 684 CGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGV 743

Query: 406 LNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           L AC++    E+G K   +    +G          +V++Y + G +++
Sbjct: 744 LTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE 791



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 196/411 (47%), Gaps = 51/411 (12%)

Query: 1   VLKACTSK-KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLK+C+S   D  +G  +HG ++  G D D  + NS++  Y KC  F  + +LF  + E+
Sbjct: 393 VLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEK 452

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKE-------------------------------MV 88
             VSWN + S Y+    ++++V  F++                               MV
Sbjct: 453 DTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMV 512

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            +G   N+ + S  +   +      LG++IH   +K+G   D F  N+L+DMY K G +E
Sbjct: 513 AAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEME 572

Query: 149 DAVAVFKDIEHP---------------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            A  +FK +                  + VSW+++++G V +   + ALK F  M  S++
Sbjct: 573 KASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQV 632

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             + FT TS + ACA   + ELGRQ+H  + K+    D  +G  ++DMY KCGS+++A +
Sbjct: 633 EVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWL 692

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK--SVASF 311
           IF+   ++N++ W  +ISG   +G   EA  LF  M  EG+  ++ +   VL   S A  
Sbjct: 693 IFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGL 752

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
              G CK    +               ++D YG+ G + + +K F  ++A+
Sbjct: 753 LEEG-CKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE-IKEFIHNNAI 801



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 27/246 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC S   L LG QVHG +   G   D F+ +S++ MY KCG+  D+  +F+   +R+
Sbjct: 642 VVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRN 701

Query: 61  VVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV W S+ S C +H     EAV  F+ M+  GI PNE S   ++ AC+ +G    G K  
Sbjct: 702 VVLWTSMISGCALHGQG-REAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYF 760

Query: 120 G-----YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS-----WNAVI 169
                 Y I+ G  ++ F+   +VD+Y + G L +     K+  H + +S     W + +
Sbjct: 761 RLMREVYGIRPG--AEHFT--CMVDLYGRAGRLNE----IKEFIHNNAISKLSSVWRSFL 812

Query: 170 AGCVLH---EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           + C +H   E   W  K   +++  +  P    Y      CA     E   ++   + + 
Sbjct: 813 SSCRVHKNIEMGIWVCKKLLELEPFDAGP----YILFSSICATEHRWEEAAKIRSLMQQR 868

Query: 227 EIKSDP 232
            +K +P
Sbjct: 869 GVKKNP 874


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/556 (45%), Positives = 363/556 (65%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G   H  +I++ +++D I    L++MY+KCG ++ AR +F  MP ++L++WN ++  H Q
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG   +A  LF  M +EG    + T+S+V+ + A+   +  CKQ+H  ++KTA +S+ ++
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             +L+D Y KCG V+DA  +F+       V  +SM+  Y Q  L EEAL L+   Q   +
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             + F  SS L+ACA  +A  +GKQV     K G  S+ F  +SL++MYAKCG I++A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            FS + ++ +V W+A++ G ++H R  EA+  F +M + G+ PN IT +SVL AC+H GL
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 365

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V + + +F+ M +   + P   HY+CM+DILGRAG   EA + +D MPF A AS+WG+LL
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 425

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
            + RIY+N+E+ + AA+ LF IEP  +  HVLLSNIYA+   W+ VA+ R  +K++K KK
Sbjct: 426 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 485

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G SWIE+K KV++F VG+R+H R  EIY KL+++   + K GY    E DLHDVEES 
Sbjct: 486 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K++LL HHSEKLA+ FG++  P GA IR+ KNLRIC DCH+  +  S I  REIIVRD N
Sbjct: 546 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 605

Query: 756 RFHHFRNGSCSCGGYW 771
           RFHHF+NG CSCG +W
Sbjct: 606 RFHHFKNGYCSCGEFW 621



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 212/397 (53%), Gaps = 7/397 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++    +    G+  H  ++  G  +D   +N L+ MY+KCG    +R+LFD +P RS
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++   +      E+A+  F +M   G   +EF++SS++ ACA        +++HG
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 172

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K   DS++F   AL+D+YAK G ++DA  VF+ +     V+W++++AG V +E  + 
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 232

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF + ++  +  N FT +SAL ACA       G+Q+     K  I S+  V   L+D
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 292

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++EA  +F  + EKN++ WN ++SG  ++   +EA   F  M + G+  +  T
Sbjct: 293 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-LIDAYGKCGHVEDAVKIFKES 359
             +VL + +    +   ++   L ++    S + +  S ++D  G+ G + +A K F + 
Sbjct: 353 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA-KDFIDR 411

Query: 360 SAVDLVACT--SMITA---YAQFGLGEEALKLYLEMQ 391
              D  A    S++ +   Y    L E A K   E++
Sbjct: 412 MPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIE 448



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 238/452 (52%), Gaps = 8/452 (1%)

Query: 85  KEMVLSGIRPNEFS-LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           KE+V  GIR    S L  ++ + A +  ++ G   H   I++G  +D  ++N L++MY+K
Sbjct: 35  KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 94

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G +E A  +F ++    +VSWN ++     +   + AL LF QM+    + + FT +S 
Sbjct: 95  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 154

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           + ACA        +QLH   +K  + S+  VG  L+D+YAKCG + +A ++F  MPE++ 
Sbjct: 155 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 214

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           + W+ +++G++QN    EA  LF      G+  +Q T+S+ L + A+  A+   KQV A+
Sbjct: 215 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 274

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S KT   S+ ++++SLID Y KCG +E+A  +F      ++V   ++++ +++     EA
Sbjct: 275 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 334

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVN 442
           +  + +MQ   I P+     S+L+AC++L   E+G++    +I+   +S +    + +V+
Sbjct: 335 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVD 394

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML---EDGVLP 498
           +  + G + +A      +P D     W +++     + R  E  ++  + L   E     
Sbjct: 395 ILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIY-RNLELAEVAAKHLFEIEPHNAG 453

Query: 499 NHITLVSVLCACNHAGLVAEAKHHF-ESMEKK 529
           NH+ L ++  A +    VA A++   ES  KK
Sbjct: 454 NHVLLSNIYAANDRWEEVARARNLLKESKAKK 485



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 3/288 (1%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           + L  +L+S A  +A       HA  ++    +D    N L++ Y KCG VE A K+F E
Sbjct: 48  SELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDE 107

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                LV+  +M+ ++ Q G  E+AL L+++MQ    +   F  SS++ ACA      + 
Sbjct: 108 MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC 167

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H   +K    S+ F G +L+++YAKCG + DA+  F  +P+R  V+WS+M+ G  Q+
Sbjct: 168 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 227

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
              +EAL +F +    G+  N  T+ S L AC     + E K   +++  K GI      
Sbjct: 228 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK-QVQAVSCKTGIGSNIFV 286

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVE 585
            + +ID+  + G  +EA  +  ++  + N  +W A+L G +R  +++E
Sbjct: 287 ISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSGFSRHVRSLE 333


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/708 (36%), Positives = 402/708 (56%), Gaps = 66/708 (9%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++F+ N+L+ +YAK G L DA AVF ++   D VSW  ++ G         A+K+F  M 
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
           +  ++P  FT T+ L +CA  E + +GR++H  ++K+ + S   V   +++MY KCG  +
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214

Query: 250 EARMIFHLMPEKN-------------------------------LIAWNIVISGHLQNGG 278
            AR +F  MPE++                               +++WN VI+G+ QNG 
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274

Query: 279 DMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           + +A   F  M     +  D+ T+++VL + A+   + + KQVHA  +++       + N
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334

Query: 338 SLIDAYGKCGHVEDAVKIFKES---------------------------------SAVDL 364
           +LI  Y K G VE+A  + +++                                 S  D+
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           VA T+MI  Y Q G  +EA++L+  M      P+S+  +++L+ CA+L+  E GKQ+H  
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKE 483
            I+      +   NS+V MYA+ GS+  A R F  +  R   V+W++MI  LAQHG G++
Sbjct: 455 AIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED 514

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+ +F +ML  GV P+ IT V VL AC H G V E K +F+ ++ K GI P   HYACM+
Sbjct: 515 AVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMV 574

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+L RAG F EA E +  MP + +A  WG+LL A R++KN ++ + AAE L +I+P  S 
Sbjct: 575 DLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSG 634

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +  LSN+Y++ G W++ AK+ +  KD  +KKE G SW  + ++V+ F   D  H +   
Sbjct: 635 AYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDT 694

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           +Y    ++ D + KAG+VP +++ LHDV++  KE++L  HSEKLA+AFGL++TP   T+R
Sbjct: 695 VYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLR 754

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + KNLR+C DCHT+ +FISK+  REII+RD  RFHHF++G CSC  YW
Sbjct: 755 IMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 239/536 (44%), Gaps = 110/536 (20%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C + +   +G +VH  VV  G  S   VANS++ MY KCG+   +R +F+ +PERS
Sbjct: 168 VLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERS 227

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSG------------------- 91
           V SWN++ S   H   ++ A+  F+ M          V++G                   
Sbjct: 228 VSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLS 287

Query: 92  ---IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              + P+EF+++S+++ACA  G   +G+++H Y ++          NAL+ MYAK G++E
Sbjct: 288 YSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVE 347

Query: 149 DAVAVFK-----------------------DIEHP----------DIVSWNAVIAGCVLH 175
           +A  V +                       D++H           D+V+W A+I G   +
Sbjct: 348 NARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQN 407

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            HND A++LF+ M  S   PN +T  + L  CA +   E G+Q+HC  I+   +    V 
Sbjct: 408 GHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVS 467

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             +V MYA+ GS+  AR +F  +   K  + W  +I    Q+G   +A  LF  M R GV
Sbjct: 468 NSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGV 527

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T   VL +         C  V  +      E   Y    L D +G          
Sbjct: 528 KPDRITFVGVLSA---------CTHVGFVD-----EGKRYF-QQLQDKHG---------- 562

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC----- 409
           I  E S     AC  M+   A+ GL  EA +    +Q   + PD+    SLL+AC     
Sbjct: 563 IVPEMSH---YAC--MVDLLARAGLFSEAQEF---IQQMPVEPDAIAWGSLLSACRVHKN 614

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           A+L+     K + +     G      A ++L N+Y+ CG  +DA + +    D+ +
Sbjct: 615 ADLAELAAEKLLSIDPGNSG------AYSALSNVYSACGRWNDAAKIWKRRKDKSV 664



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 44/218 (20%)

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS------------------------- 432
           DS  C+ LL  C   +    G+ +H   +K G ++                         
Sbjct: 22  DSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFRE 81

Query: 433 -------------DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
                        + F  NSL+++YAK G + DA   F+E+P+R  VSW+ M+ GL + G
Sbjct: 82  ARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVG 141

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           R  EA++MF  M+ DG+ P   TL +VL  CA   A  V    H F     K G+     
Sbjct: 142 RFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVV---KLGLSSCVP 198

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               ++++ G+ G  + A  + + MP + + S W A++
Sbjct: 199 VANSVLNMYGKCGDAETARAVFERMP-ERSVSSWNAMV 235


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/627 (40%), Positives = 381/627 (60%), Gaps = 10/627 (1%)

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
           K  +  D+ SWN++IA       +  +L+ F  M+  +I PN  T+  A+K+C+ +    
Sbjct: 40  KYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLN 99

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G+Q H   +    +SD  V   L+DMY+KCG +  AR++F  +P +N++ W  +I+G++
Sbjct: 100 SGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYV 159

Query: 275 QNGGDMEAASLFPWMYRE---------GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           QN    EA  +F     E         G   D   + +VL + +      V + VH +++
Sbjct: 160 QNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI 219

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   +    + N+L+DAY KCG V  + K+F + +  D+V+  SMI  YAQ GL  +A +
Sbjct: 220 KVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFE 279

Query: 386 LYLEMQDREINP-DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           ++  M        +    S+LL ACA+  A   G  +H  +IK G++++     S+++MY
Sbjct: 280 VFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMY 339

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
            KCG  + A  AF  + ++ + SW+AMI G   HG  +EAL +F QM+  GV PN+IT +
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFI 399

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           SVL AC+HAG + E    F +M  ++ ++P  EHY CM+D+LGRAG  +EA  L+ +M  
Sbjct: 400 SVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV 459

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           + +  +WG+LL A RI+K+VE+ + +A  LF ++P     +VLL+NIYA AG W +V ++
Sbjct: 460 RRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERM 519

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  +KD  L K PG S +E+K +V+ F VGD+ H + ++IY  L+E+S  L +AGYVP +
Sbjct: 520 RILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNM 579

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
            + LHDV+E EKE ++  HSEKLAVAFG++ + PG+TI V KNLR+C DCHT  + ISKI
Sbjct: 580 ASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKI 639

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
           VSREIIVRD  RFHHF++G CSCG YW
Sbjct: 640 VSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 201/385 (52%), Gaps = 14/385 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K+C++  DL  G Q H   +  GF+SD FV+++L+ MY+KCG   ++R LFD IP R++
Sbjct: 89  IKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNI 148

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLS---------GIRPNEFSLSSMINACAGSGDS 112
           V+W SL + YV  D   EA+  FKE +           G   +  ++ S+++AC+   + 
Sbjct: 149 VTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNK 208

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            +   +HG +IK+G D  M   N L+D YAK G +  +  VF D+   D+VSWN++IA  
Sbjct: 209 AVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVY 268

Query: 173 VLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
             +  +  A ++F  M K+     N  T ++ L ACA      +G  LH  +IKM   ++
Sbjct: 269 AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNN 328

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
            I+   ++DMY KCG  + AR  F  M EKN+ +W  +I+G+  +G   EA  +F  M  
Sbjct: 329 VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW 388

Query: 292 EGVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            GV  +  T  +VL   S A F   G  +  +A+S +   E        ++D  G+ G++
Sbjct: 389 AGVKPNYITFISVLAACSHAGFLEEG-WRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYI 447

Query: 350 EDAVKIFKESSA-VDLVACTSMITA 373
           ++A  + K      D V   S++ A
Sbjct: 448 KEAYNLIKSMKVRRDFVLWGSLLAA 472



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 200/380 (52%), Gaps = 15/380 (3%)

Query: 52  LFDAIPERS-VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
           LF+   +R+ V SWNSL +         E++  F  M    I+PN  +    I +C+   
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
           D   G++ H  ++  G++SD+F ++AL+DMY+K G L +A  +F +I   +IV+W ++I 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 171 GCVLHEHNDWALKLFQQ--MKSSEINP-------NMFTYTSALKACAGMELKELGRQLHC 221
           G V ++    AL +F++   + SE N        +     S L AC+ +  K +   +H 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 222 SLIKMEIKSDPIVGV--GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
             IK+ +  D ++GV   L+D YAKCG +  +R +F  M EK++++WN +I+ + QNG  
Sbjct: 217 VAIKVGL--DKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLS 274

Query: 280 MEAASLFPWMYREGVG-FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            +A  +F  M + G G +++ TLST+L + A   A+ V   +H   +K  + ++  +  S
Sbjct: 275 TDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS 334

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           +ID Y KCG  E A   F      ++ + T+MI  Y   G   EAL ++ +M    + P+
Sbjct: 335 IIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPN 394

Query: 399 SFVCSSLLNACANLSAYEQG 418
                S+L AC++    E+G
Sbjct: 395 YITFISVLAACSHAGFLEEG 414



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 145/278 (52%), Gaps = 9/278 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+   +  +   VHG+ +  G D    V N+L+  YAKCG    SR++FD + E+ 
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKD 257

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSWNS+ + Y       +A   F  M+ +G  + NE +LS+++ ACA  G   +G  +H
Sbjct: 258 VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLH 317

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              IK+GY +++  A +++DMY K G  E A   F  ++  ++ SW A+IAG  +H    
Sbjct: 318 DQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAR 377

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-- 237
            AL +F QM  + + PN  T+ S L AC+     E G +   ++   E   +P  GV   
Sbjct: 378 EALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAM-SHEYNVEP--GVEHY 434

Query: 238 --LVDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISG 272
             +VD+  + G + EA  +I  +   ++ + W  +++ 
Sbjct: 435 GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/587 (41%), Positives = 369/587 (62%), Gaps = 1/587 (0%)

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
              + S E+ P    Y + + ACA  +  +  R++H  L     + D  +   L+ +Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CGS+ EA  +F  M +K++++W  +I+G+ QN    EA  L P M +     +  T +++
Sbjct: 99  CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           LK+  ++   G+  Q+HAL+VK  +  D Y+ ++L+D Y +CG ++ A  +F +  + + 
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V+  ++I+ +A+ G GE AL ++ EMQ        F  SS+ +  A + A EQGK VH H
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAH 278

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           ++K       F GN++++MYAK GS+ DA + F  + ++ +V+W++M+   AQ+G GKEA
Sbjct: 279 MVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +  F +M + G+  N IT + +L AC+H GLV E KH+F+ M K++ ++P  EHY  ++D
Sbjct: 339 VSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVD 397

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGRAG    A+  +  MP +  A+VWGALL A R++KN +VGQ AA+ +F ++P+ S  
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGP 457

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
            VLL NIYAS G WD  A+VR+ MK   +KKEP  SW+E+ + V+ F   D +H R++EI
Sbjct: 458 PVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEI 517

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y   DE+S  + K GYVP ++  L  V+E E+E  L +HSEK+A+AF LI  P GATIR+
Sbjct: 518 YKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRI 577

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KN+RIC DCH++F++ISK+  REI+VRD NRFHHF NGSCSCG YW
Sbjct: 578 MKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 257/550 (46%), Gaps = 54/550 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC   K+L    ++HG +  + F+ D F+ NSL+ +Y KCG+ +++ ++FD + ++ +
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW SL + Y   D   EA+     M+    +PN F+ +S++ A     DS +G +IH  
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K  +  D++  +AL+DMYA+ G ++ A AVF  ++  + VSWNA+I+G       + A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L +F +M+ +      FTY+S     AG+   E G+ +H  ++K   K    VG  ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDM 297

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAK GSM +AR +F  +  K+L+ WN +++   Q G   EA S F  M + G+  +Q T 
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITF 357

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             +L + +           H   VK   E   Y    +I  Y     +E  V +      
Sbjct: 358 LCILTACS-----------HGGLVK---EGKHYF--DMIKEYNLEPEIEHYVTV------ 395

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
           VDL+          + GL   AL    +M    + P + V  +LL AC      + G+  
Sbjct: 396 VDLL---------GRAGLLNYALVFIFKM---PMEPTAAVWGALLAACRMHKNAKVGQFA 443

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM----- 471
             H+ +     D+     L N+YA  G  D A R    +   G+      SW  +     
Sbjct: 444 ADHVFQLD-PDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVH 502

Query: 472 --IGGLAQHGRGKEALQMFGQ----MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
             +     H R +E  +M+ +    + ++G +P+   +  VL   +     A  ++H E 
Sbjct: 503 MFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD---MDYVLLHVDEQEREANLQYHSEK 559

Query: 526 MEKKFGIQPM 535
           +   F +  M
Sbjct: 560 IALAFALIQM 569



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 203/409 (49%), Gaps = 10/409 (2%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P      + I ACA S +    RKIHG+     ++ D F  N+L+ +Y K G++ +A 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D+VSW ++IAG   ++    A+ L   M      PN FT+ S LKA     
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
              +G Q+H   +K +   D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +IS
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  + G    A  +F  M R G      T S++   +A   A+   K VHA  VK+  + 
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             ++ N+++D Y K G + DA K+F+     DLV   SM+TA+AQ+GLG+EA+  + EM+
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346

Query: 392 DREI--NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
              I  N  +F+C  +L AC++    ++GK     I ++    +     ++V++  + G 
Sbjct: 347 KSGIYLNQITFLC--ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGL 404

Query: 450 IDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           ++ A     ++P     + W A++     H   K      GQ   D V 
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK-----VGQFAADHVF 448



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 138/272 (50%), Gaps = 1/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +  D  +G Q+H + V   +  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 158 LLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L S +      E A+  F EM  +G     F+ SS+ +  AG G    G+ +H 
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHA 277

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K       F  N ++DMYAK G++ DA  VF+ + + D+V+WN+++     +     
Sbjct: 278 HMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+ S I  N  T+   L AC+   L + G+     + +  ++ +    V +VD
Sbjct: 338 AVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVD 397

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
           +  + G ++ A +    MP E     W  +++
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLA 429


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/717 (36%), Positives = 412/717 (57%), Gaps = 46/717 (6%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           +S++  C    +  LG ++H   +  G D   F  + L+++Y + G +EDA  +F  +  
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73

Query: 160 PDIVSWNAVIAG-CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            ++ SW A++   C L ++ +  +KLF  M +  + P+ F +    KAC+ ++   +G+ 
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEE-TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           ++  ++ +  + +  V   ++DM+ KCG MD AR  F  +  K++  WNI++SG+   G 
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FESDDYIVN 337
             +A ++F  M  EGV  +  T+++ + +  +   +   +++H   +K    +SD  + N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 338 SLIDAYGKCGHVEDAVK------------------------------------------- 354
           SL+D Y KC  VE A +                                           
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E S  D+V   S+I+A AQ G    AL L  EM    +  ++    S L AC+ L+A
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
             QGK++H  II+ G  +  F  NSL++MY +CGSI  + R F  +P R +VSW+ MI  
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG G +A+ +F Q    G+ PNHIT  ++L AC+H+GL+ E   +F+ M+ ++ + P
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             E YACM+D+L RAG+F E +E ++ MPF+ NA+VWG+LLGA RI+ N ++ ++AA  L
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 552

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F +EP+ S  +VL++NIY++AG W++ AK+R  MK+  + K PG SWIEVK K+++F VG
Sbjct: 553 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 612

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH   ++I AK++ +   + + GYVP     L DV+E EKE  L  HSEK+A+AFGLI
Sbjct: 613 DTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLI 672

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T  G  +R+ KNLR+C DCH++ +FISK+  R+II+RD  RFHHF +G CSCG YW
Sbjct: 673 STTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 281/606 (46%), Gaps = 87/606 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C    +L LG QVH  +V  G D  EF+ + L+ +Y + G   D+RR+FD + ER+
Sbjct: 16  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW ++   Y      EE +  F  MV  G+RP+ F    +  AC+   +  +G+ ++ 
Sbjct: 76  VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y + +G++ +     +++DM+ K G ++ A   F++IE  D+  WN +++G         
Sbjct: 136 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLV 239
           AL +F++M    + PN  T  SA+ AC  + L   GR++H   IK+ E+ SD +VG  LV
Sbjct: 196 ALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNI------------------------------- 268
           D YAKC S++ AR  F ++ + +L++WN                                
Sbjct: 256 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFS 315

Query: 269 ------------VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
                       +IS   Q+G  + A  L   M    V  +  T+ + L + +   A+  
Sbjct: 316 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 375

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K++H   ++   ++ ++I+NSLID YG+CG ++ + +IF      DLV+   MI+ Y  
Sbjct: 376 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 435

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G G +A+ L+ + +   + P+    ++LL+AC++    E+G +       F  M   +A
Sbjct: 436 HGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY------FKMMKTEYA 489

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            +  V  YA                         M+  L++ G+  E L+   +M  +  
Sbjct: 490 MDPAVEQYA------------------------CMVDLLSRAGQFNETLEFIEKMPFE-- 523

Query: 497 LPNHITLVSVLCACN---HAGLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAGKF 552
            PN     S+L AC    +  L   A  +       F ++P    +Y  M +I   AG++
Sbjct: 524 -PNAAVWGSLLGACRIHCNPDLAEYAARYL------FELEPQSSGNYVLMANIYSAAGRW 576

Query: 553 QEAMEL 558
           ++A ++
Sbjct: 577 EDAAKI 582



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 50/422 (11%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y S L+ C  +    LG Q+H  L+   +     +G  L+++Y + G +++AR +F  M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+N+ +W  ++  +   G   E   LF  M  EGV  D      V K+ +  +   V K 
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           V+   +   FE +  +  S++D + KCG ++ A + F+E    D+     M++ Y   G 
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGN 438
            ++AL ++ +M    + P+S   +S ++AC NLS    G+++H + IK   + SD   GN
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG--GLAQHGRGKEALQMFGQM----- 491
           SLV+ YAKC S++ A R F  I    +VSW+AM+   G  Q+G GK AL+ F +M     
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 492 ------LEDGVLPNHI------------------------------TLVSVLCACNHAGL 515
                   D V+ N I                              T+VS L AC+    
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 516 VAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           + + K  H F     + G+         +ID+ GR G  Q++  + D MP Q +   W  
Sbjct: 373 LRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNV 428

Query: 574 LL 575
           ++
Sbjct: 429 MI 430



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 4/182 (2%)

Query: 396 NPDSFV--CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           NPD  +   +S+L  C  L     G QVH  ++  G     F G+ L+ +Y + G ++DA
Sbjct: 5   NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 64

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            R F ++ +R + SW+A++      G  +E +++F  M+ +GV P+H     V  AC+  
Sbjct: 65  RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 124

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
                 K  ++ M    G +        ++D+  + G+   A    + + F+ +  +W  
Sbjct: 125 KNYRVGKDVYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNI 182

Query: 574 LL 575
           ++
Sbjct: 183 MV 184


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/674 (39%), Positives = 410/674 (60%), Gaps = 5/674 (0%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           SS+I  C G        KI  +++K G+   +   N L+D Y K G++  A  VF ++ H
Sbjct: 81  SSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPH 138

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
             IV+WN++IA  + +  +  A+ ++Q+M    I P+ FT++S  KA + + L   G++ 
Sbjct: 139 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 198

Query: 220 HCSLIKMEIK-SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           H   + + +  S+  VG  LVDMYAK G M +AR++   +  K+++ +  +I G+  +G 
Sbjct: 199 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGE 258

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
           D E+  +F  M ++G+  ++ TLS+VL    + + +   + +H L VK   ES      S
Sbjct: 259 DGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTS 318

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y +CG V+D++K+FK+    + V  TS+I    Q G  E AL  + +M    I P+
Sbjct: 319 LLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPN 378

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           SF  SS+L AC++L+  EQGKQ+H  ++KFG   D + G +L++ Y KCGS + A   F+
Sbjct: 379 SFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFN 438

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            + +  +VS ++MI   AQ+G G EALQ+F  M + G+ PN++T + VL ACN+AGL+ E
Sbjct: 439 GLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEE 498

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
             H F S      I+  ++HYACM+D+LGRAG+ +EA  L++ +   ++  +W  LL A 
Sbjct: 499 GCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSAC 557

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+ +VE+ +     +  + PE   THVLLSN+YAS G W  V +++  M++ +LKK P 
Sbjct: 558 RIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPA 617

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
           MSW++V+ +++TF  GD SH   ++I  KL+E+ + + + GYVP     L D++E +K +
Sbjct: 618 MSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIR 677

Query: 699 LLYHHSEKLAVAFGLIATP-PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            LY+HSEKLAVAF L  +     TIR+ KNLR+C DCHT  +F+SKIV R+II RDV RF
Sbjct: 678 SLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRF 737

Query: 758 HHFRNGSCSCGGYW 771
           HHFRNG CSCG YW
Sbjct: 738 HHFRNGLCSCGDYW 751



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 264/506 (52%), Gaps = 12/506 (2%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N L+  Y KCG+ + +R++FD +P R +V+WNS+ + Y+     +EA+  ++ MV  G
Sbjct: 112 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 171

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD-SDMFSANALVDMYAKVGNLEDA 150
           I P+EF+ SS+  A +  G    G++ HG S+ LG   S++F  +ALVDMYAK G + DA
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 231

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             V   +   D+V + A+I G   H  +  +L++F+ M    I  N +T +S L  C  +
Sbjct: 232 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 291

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
           E    GR +H  ++K  ++S       L+ MY +CG +D++  +F      N + W  VI
Sbjct: 292 EDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVI 351

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
            G +QNG +  A   F  M R  +  +  TLS+VL++ +S   +   KQ+HA+ +K   +
Sbjct: 352 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            D Y+  +LID YGKCG  E A  +F     VD+V+  SMI +YAQ G G EAL+L+  M
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG---FMSDTFAGNSLVNMYAKC 447
           +D  + P++     +L+AC N    E+G  +       G      D +A   +V++  + 
Sbjct: 472 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYA--CMVDLLGRA 529

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML----EDGVLPNHITL 503
           G + +A+   +++    +V W  ++     HG  + A ++  +++    EDG    H+ L
Sbjct: 530 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDG--GTHVLL 587

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKK 529
            ++  +  +   V E K     M  K
Sbjct: 588 SNLYASTGNWSKVIEMKSAMREMRLK 613



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 194/364 (53%), Gaps = 6/364 (1%)

Query: 14  GLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G + HG  V  G   S+ FV ++LV MYAK G   D+R + D +  + VV + +L   Y 
Sbjct: 195 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS 254

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
           H     E++  F+ M   GI  NE++LSS++  C    D   GR IHG  +K G +S + 
Sbjct: 255 HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVA 314

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           S  +L+ MY + G ++D++ VFK   +P+ V+W +VI G V +   + AL  F+QM  S 
Sbjct: 315 SQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSS 374

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I PN FT +S L+AC+ + + E G+Q+H  ++K  +  D  VG  L+D Y KCGS + AR
Sbjct: 375 ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIAR 434

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F+ + E ++++ N +I  + QNG   EA  LF  M   G+  +  T   VL +  +  
Sbjct: 435 SVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAG 494

Query: 313 AIGVCKQVHALSVKTA---FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
            +     + + +  +       D Y    ++D  G+ G +++A  +  + +  D+V   +
Sbjct: 495 LLEEGCHIFSSARNSGNIELTKDHYAC--MVDLLGRAGRLKEAEMLINQVNISDVVIWRT 552

Query: 370 MITA 373
           +++A
Sbjct: 553 LLSA 556


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 367/591 (62%), Gaps = 1/591 (0%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+    + + E+ P    Y S + ACA  +     R +H  L +  +  D  +   L+ 
Sbjct: 46  GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ +AR +F  +P +++++W  +I+G+ QN    EA  L P M R        T
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++ LK+  +    G+ +Q+HAL+VK   + D Y+ ++L+D Y +C  ++ A+++F    
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + + V+  ++I  +A+ G GE  L  + EMQ        F  SS+ +A A + A EQG+ 
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH H+IK G     F  N+++ MYAK GS+ DA + F  +  R +V+W+ M+   AQ+G 
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGL 345

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEA+  F ++ + G+  N IT +SVL AC+H GLV E K +F+ M K + ++P  +HY 
Sbjct: 346 GKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYV 404

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
             +D+LGRAG  +EA+  V  MP +  A+VWGALLGA R++KN ++GQ+AA+ +F ++PE
Sbjct: 405 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPE 464

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +   VLL NIYAS G WD+ A+VR+ MK   +KKEP  SW+E+++ V+ F   D +H +
Sbjct: 465 DTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPK 524

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S+EIY   +EV+  + KAGYVP  +  L  ++E E+E  L +HSEK+A+AF LI  P GA
Sbjct: 525 SEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGA 584

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TIR+ KN+RIC DCH++F ++S++  REI+VRD NRFHHF NGSCSCG YW
Sbjct: 585 TIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 218/465 (46%), Gaps = 35/465 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   K+L     +H  +  +    D F+ NSL+ MY KCG   D+R +FD IP R 
Sbjct: 68  IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRD 127

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW  L + Y   D   EA+    +M+ +  RP+ F+ +S + A    G   +G ++H 
Sbjct: 128 VVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHA 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K   D D++  +AL+DMYA+   ++ A+ VF  ++  + VSWNA+IAG       + 
Sbjct: 188 LAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGET 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L  F +M+ +      FTY+S   A A +   E GR +H  +IK   K    V   ++ 
Sbjct: 248 TLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILG 307

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GSM +AR +F  + +++L+ WN +++   Q G   EA + F  + + G+  +Q T
Sbjct: 308 MYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQIT 367

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +    +   KQ   +         DY V   ID Y                S
Sbjct: 368 FLSVLTACSHGGLVKEGKQYFDM-------MKDYNVEPEIDHY---------------VS 405

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VDL+          + GL +EAL    +M    + P + V  +LL AC      + G+ 
Sbjct: 406 FVDLL---------GRAGLLKEALIFVFKM---PMEPTAAVWGALLGACRMHKNAKIGQY 453

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              H+ +     DT     L N+YA  G  DDA R    +   G+
Sbjct: 454 AADHVFELD-PEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGV 497



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 201/414 (48%), Gaps = 7/414 (1%)

Query: 86  EMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           +++L+G + P      S+I ACA S +    R IH +  +     D F  N+L+ MY K 
Sbjct: 51  DLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKC 110

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G + DA  VF  I   D+VSW  +I G   ++    AL L   M  +   P+ FT+TS L
Sbjct: 111 GAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFL 170

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
           KA      + +G Q+H   +K  +  D  VG  L+DMYA+C  MD A  +F  +  KN +
Sbjct: 171 KAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEV 230

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +WN +I+G  + G        F  M R G G    T S+V  ++A   A+   + VHA  
Sbjct: 231 SWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHM 290

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K+  +   ++ N+++  Y K G + DA K+F      DLV   +M+TA+AQ+GLG+EA+
Sbjct: 291 IKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAV 350

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
             + E++   I  +     S+L AC++    ++GKQ    +  +    +     S V++ 
Sbjct: 351 AHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLL 410

Query: 445 AKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            + G + +A     ++P     + W A++G    H   K      GQ   D V 
Sbjct: 411 GRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK-----IGQYAADHVF 459


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/556 (45%), Positives = 363/556 (65%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G   H  +I++ +++D I    L++MY+KCG ++ AR +F  MP ++L++WN ++  H Q
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG   +A  LF  M +EG    + T+S+V+ + A+   +  CKQ+H  ++KTA +S+ ++
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             +L+D Y KCG V+DA  +F+       V  +SM+  Y Q  L EEAL L+   Q   +
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             + F  SS L+ACA  +A  +GKQV     K G  S+ F  +SL++MYAKCG I++A  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            FS + ++ +V W+A++ G ++H R  EA+  F +M + G+ PN IT +SVL AC+H GL
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V + + +F+ M +   + P   HY+CM+DILGRAG   EA + +D MPF A AS+WG+LL
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 398

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
            + RIY+N+E+ + AA+ LF IEP  +  HVLLSNIYA+   W+ VA+ R  +K++K KK
Sbjct: 399 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 458

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G SWIE+K KV++F VG+R+H R  EIY KL+++   + K GY    E DLHDVEES 
Sbjct: 459 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 518

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K++LL HHSEKLA+ FG++  P GA IR+ KNLRIC DCH+  +  S I  REIIVRD N
Sbjct: 519 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 578

Query: 756 RFHHFRNGSCSCGGYW 771
           RFHHF+NG CSCG +W
Sbjct: 579 RFHHFKNGYCSCGEFW 594



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 212/397 (53%), Gaps = 7/397 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++    +    G+  H  ++  G  +D   +N L+ MY+KCG    +R+LFD +P RS
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++   +      E+A+  F +M   G   +EF++SS++ ACA        +++HG
Sbjct: 86  LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 145

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K   DS++F   AL+D+YAK G ++DA  VF+ +     V+W++++AG V +E  + 
Sbjct: 146 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 205

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF + ++  +  N FT +SAL ACA       G+Q+     K  I S+  V   L+D
Sbjct: 206 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 265

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++EA  +F  + EKN++ WN ++SG  ++   +EA   F  M + G+  +  T
Sbjct: 266 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-LIDAYGKCGHVEDAVKIFKES 359
             +VL + +    +   ++   L ++    S + +  S ++D  G+ G + +A K F + 
Sbjct: 326 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA-KDFIDR 384

Query: 360 SAVDLVACT--SMITA---YAQFGLGEEALKLYLEMQ 391
              D  A    S++ +   Y    L E A K   E++
Sbjct: 385 MPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIE 421



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 238/452 (52%), Gaps = 8/452 (1%)

Query: 85  KEMVLSGIRPNEFS-LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           KE+V  GIR    S L  ++ + A +  ++ G   H   I++G  +D  ++N L++MY+K
Sbjct: 8   KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 67

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G +E A  +F ++    +VSWN ++     +   + AL LF QM+    + + FT +S 
Sbjct: 68  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 127

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           + ACA        +QLH   +K  + S+  VG  L+D+YAKCG + +A ++F  MPE++ 
Sbjct: 128 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 187

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           + W+ +++G++QN    EA  LF      G+  +Q T+S+ L + A+  A+   KQV A+
Sbjct: 188 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 247

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S KT   S+ ++++SLID Y KCG +E+A  +F      ++V   ++++ +++     EA
Sbjct: 248 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 307

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVN 442
           +  + +MQ   I P+     S+L+AC++L   E+G++    +I+   +S +    + +V+
Sbjct: 308 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVD 367

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML---EDGVLP 498
           +  + G + +A      +P D     W +++     + R  E  ++  + L   E     
Sbjct: 368 ILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIY-RNLELAEVAAKHLFEIEPHNAG 426

Query: 499 NHITLVSVLCACNHAGLVAEAKHHF-ESMEKK 529
           NH+ L ++  A +    VA A++   ES  KK
Sbjct: 427 NHVLLSNIYAANDRWEEVARARNLLKESKAKK 458



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 3/288 (1%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           + L  +L+S A  +A       HA  ++    +D    N L++ Y KCG VE A K+F E
Sbjct: 21  SELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDE 80

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                LV+  +M+ ++ Q G  E+AL L+++MQ    +   F  SS++ ACA      + 
Sbjct: 81  MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC 140

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H   +K    S+ F G +L+++YAKCG + DA+  F  +P+R  V+WS+M+ G  Q+
Sbjct: 141 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 200

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
              +EAL +F +    G+  N  T+ S L AC     + E K   +++  K GI      
Sbjct: 201 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK-QVQAVSCKTGIGSNIFV 259

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVE 585
            + +ID+  + G  +EA  +  ++  + N  +W A+L G +R  +++E
Sbjct: 260 ISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSGFSRHVRSLE 306


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/687 (39%), Positives = 398/687 (57%), Gaps = 13/687 (1%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+   + PN ++    + AC+   D   GR IH ++I  G  +D+F + AL+DMY K   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLH--EHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           L DA  +F  +   D+V+WNA++AG   H   H+  A  L  QM+   + PN  T  + L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 205 KACAGMELKELGRQLHCSLI----------KMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
              A       G  +H   I          K ++    ++G  L+DMYAKCGS+  AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-DQTTLSTVLKSVASFQA 313
           F  MP +N + W+ +I G +      +A  LF  M  +G+ F   T++++ L++ AS   
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + +Q+HAL  K+   +D    NSL+  Y K G ++ A+ +F E +  D V+ +++++ 
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q G  EEA  ++ +MQ   + PD+    SL+ AC++L+A + G+  H  +I  G  S+
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           T   N+L++MYAKCG ID + + F+ +P R IVSW+ MI G   HG GKEA  +F +M  
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G  P+ +T + +L AC+H+GLV E KH F  M   +G+ P  EHY CM+D+L R G   
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA E + +MP +A+  VW ALLGA R+YKN+++G+  + M+  + PE +   VLLSNIY+
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           +AG +D  A+VR   K    KK PG SWIE+   ++ F  GD+SH +S EIY +LD +  
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            + K GY P     L D+EE EKE+ L  HSEKLA+A+G+++     TI V KNLR+C D
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 660

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHF 760
           CHT  + IS +  R IIVRD NRFHHF
Sbjct: 661 CHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 258/517 (49%), Gaps = 26/517 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC++  D   G  +H   +  G  +D FV+ +L+ MY KC    D+  +F  +P R +
Sbjct: 17  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 76

Query: 62  VSWNSLFSCYVHCDFLEEAVCFF--KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V+WN++ + Y H      AV      +M +  +RPN  +L +++   A  G    G  +H
Sbjct: 77  VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 136

Query: 120 GYSIKLGYDSDMFS----------ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            Y I+     +  S            AL+DMYAK G+L  A  VF  +   + V+W+A+I
Sbjct: 137 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALI 196

Query: 170 AGCVLHEHNDWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
            G VL      A  LF+ M +     ++P   +  SAL+ACA ++   +G QLH  L K 
Sbjct: 197 GGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKS 254

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            + +D   G  L+ MYAK G +D+A  +F  M  K+ ++++ ++SG++QNG   EA  +F
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 314

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M    V  D  T+ +++ + +   A+   +  H   +     S+  I N+LID Y KC
Sbjct: 315 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 374

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSS 404
           G ++ + ++F    + D+V+  +MI  Y   GLG+EA  L+LEM +    PD  +F+C  
Sbjct: 375 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC-- 432

Query: 405 LLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           LL+AC++     +GK   HV    +G          +V++ ++ G +D+A      +P R
Sbjct: 433 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 492

Query: 464 GIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGV 496
             V  W A++G    +     GK+  +M  ++  +G 
Sbjct: 493 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 529



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+    L  G   HG V+  G  S+  + N+L+ MYAKCG    SR++F+ +P R 
Sbjct: 332 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 391

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           +VSWN++ + Y      +EA   F EM   G  P+  +   +++AC+ SG  + G+    
Sbjct: 392 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFH 451

Query: 119 ---HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
              HGY    G    M     +VD+ ++ G L++A    + +    D+  W A++  C +
Sbjct: 452 VMGHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507

Query: 175 HEHNDWALKLFQQMKSSEINP 195
           +++ D   K+ + ++  E+ P
Sbjct: 508 YKNIDLGKKVSRMIQ--ELGP 526


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/766 (37%), Positives = 450/766 (58%), Gaps = 13/766 (1%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            QV   V+ +G  SD +V ++LV  +A+ G   +++ +F ++ +++ V+ N L    V  D
Sbjct: 296  QVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQD 355

Query: 76   FLEEAVCFF---KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDM 131
            F EEAV  F   +  V          LS++           +GR +HG+ ++ G  D  +
Sbjct: 356  FSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKI 415

Query: 132  FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
              +N LV+MYAK G +E A  +F+ +E  D +SWN +I+    + + + A+  +  M+ S
Sbjct: 416  AVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQS 475

Query: 192  EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
             I+P+ F   S+L +CAG++L   G+Q+HC  +K  +  D  V   LV MY +CG+M + 
Sbjct: 476  CISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDY 535

Query: 252  RMIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
              +F+ M E + ++WN ++     +   + E   +F  M R G+  ++ T   +L +++ 
Sbjct: 536  WKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSP 595

Query: 311  FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTS 369
               + + KQVHA  +K     D+ + N+LI  Y K G +     +F   S   D ++  S
Sbjct: 596  LSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNS 655

Query: 370  MITAYAQFGLGEEALK-LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
            MI+ Y   G  +EA+  ++L +   +I  D    S +LNACA+++A E+G ++H   I+ 
Sbjct: 656  MISGYIYNGNLQEAMDCVWLMIHSGQI-MDCCTFSIILNACASVAALERGMELHAFGIRS 714

Query: 429  GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
               SD    ++LV+MY+KCG +D A + F+ +  R   SW++MI G A+HG G++A+++F
Sbjct: 715  HLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIF 774

Query: 489  GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             +ML     P+H+T VSVL AC+HAGLV     +FE M    GI P  EHY+C+ID+LGR
Sbjct: 775  EEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDH-GILPQIEHYSCVIDLLGR 833

Query: 549  AGKFQEAMELVDTMPFQANASVWGALLGAARIYK---NVEVGQHAAEMLFAIEPEKSSTH 605
            AGK  +  E +  MP + NA +W  +L A R  K   N+++G+ A+ +L  IEP+    +
Sbjct: 834  AGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNY 893

Query: 606  VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
            VL SN +A+ GMW++ AK R  M+    KKE G SW+ + D V+TF  GDRSH  +KEIY
Sbjct: 894  VLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIY 953

Query: 666  AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
             KL+ +   +  AGYVP+ E  L+D+EE  KE+LL +HSEKLA+AF L  +  G  IR+ 
Sbjct: 954  EKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSGP-IRIM 1012

Query: 726  KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH +F +IS+++SR+II+RD  RFHHF++G CSCG YW
Sbjct: 1013 KNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 192/658 (29%), Positives = 325/658 (49%), Gaps = 36/658 (5%)

Query: 1   VLKACTSKKDLFLG--LQVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAI 56
           +L+AC       LG  +QVHG+V  T + S+  V N+L+ MY  C  G  I ++R+FD  
Sbjct: 171 LLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT 230

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG----IRPNEFSLSSMIN-ACAGSGD 111
           P R +++WN+L S Y     +      FK+M        +RP E +  S+I  A   SG 
Sbjct: 231 PIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGS 290

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           S +  ++  + +K G  SD++  +ALV  +A+ G  ++A  +F  ++  + V+ N +I G
Sbjct: 291 SAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVG 350

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE----LGRQLHCSLIKME 227
            V  + ++ A+K+F   +++ ++ N  TY   L A A   + E    +GR +H  +++  
Sbjct: 351 LVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTG 409

Query: 228 IKSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
           +    I V  GLV+MYAKCG+++ A  IF LM   + I+WN +IS   QNG   EA   +
Sbjct: 410 LTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHY 469

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M +  +      L + L S A  + +   +QVH  +VK   + D  + N L+  YG+C
Sbjct: 470 SLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGEC 529

Query: 347 GHVEDAVKIFKESSAVDLVACTSM--ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           G + D  K+F   +  D V+  +M  + A +Q  +  E +K++  M    + P+     +
Sbjct: 530 GAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPI-SEIVKVFNNMMRGGLIPNKVTFIN 588

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-R 463
           LL A + LS  E GKQVH  ++K G M D    N+L++ YAK G +   +  F+ + D R
Sbjct: 589 LLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRR 648

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
             +SW++MI G   +G  +EA+     M+  G + +  T   +L AC     VA  +   
Sbjct: 649 DAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNAC---ASVAALERGM 705

Query: 524 ESMEKKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           E     FGI+   E      + ++D+  + G+   A +L ++M  Q N   W +++    
Sbjct: 706 EL--HAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSMISG-- 760

Query: 580 IYKNVEVGQHA----AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
            Y    +G+ A     EML + E     T V + +  + AG+ +   +    M D+ +
Sbjct: 761 -YARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGI 817



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 170/580 (29%), Positives = 277/580 (47%), Gaps = 24/580 (4%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            +H  ++  G + D F+ N LV  YAK      + ++FD +PER+ VSW  L S YV   
Sbjct: 82  NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141

Query: 76  FLEEAVCFFKEM---VLSGIRPNEFSLSSMINACAGSGDSLLG--RKIHGYSIKLGYDSD 130
             EEA   F+ M   V +G RP  F+  +++ AC   G   LG   ++HG   K  Y S+
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201

Query: 131 MFSANALVDMYAK--VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA--LKLFQ 186
               NAL+ MY    VG    A  VF      D+++WNA+++  V  +  D A    LF+
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMS--VYAKKGDVASTFTLFK 259

Query: 187 QMKSS----EINPNMFTYTSALK-ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            M+      ++ P   T+ S +  A        +  Q+   ++K    SD  VG  LV  
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSA 319

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           +A+ G  DEA+ IF  + +KN +  N +I G ++     EA  +F    R  V  +  T 
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGT-RNTVDVNADTY 378

Query: 302 STVLKSVASF----QAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIF 356
             +L ++A +    + + + + VH   ++T        V N L++ Y KCG +E A KIF
Sbjct: 379 VVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF 438

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +   A D ++  ++I+A  Q G  EEA+  Y  M+   I+P +F   S L++CA L    
Sbjct: 439 QLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLT 498

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+QVH   +K+G   DT   N LV MY +CG++ D  + F+ + +   VSW+ M+G +A
Sbjct: 499 AGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMA 558

Query: 477 QHGRG-KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
                  E +++F  M+  G++PN +T +++L A +    V E      +   K G+   
Sbjct: 559 SSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLS-VLELGKQVHAAVMKHGVMED 617

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                 +I    ++G       L   M  + +A  W +++
Sbjct: 618 NVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMI 657



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 232/486 (47%), Gaps = 24/486 (4%)

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
           GD+     +H   IK G + D+F  N LV+ YAK   L  A  VF ++   + VSW  ++
Sbjct: 75  GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134

Query: 170 AGCVLHEHNDWALKLFQQM---KSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLI 224
           +G VLH   + A ++F+ M     +   P  FT+ + L+AC       LG   Q+H  + 
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194

Query: 225 KMEIKSDPIVGVGLVDMYAKC--GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           K E  S+  V   L+ MY  C  G    A+ +F   P ++LI WN ++S + + G     
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVAST 254

Query: 283 ASLFPWMYR-----EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
            +LF  M R     +    + T  S +  +  S  +  V  QV    +K+   SD Y+ +
Sbjct: 255 FTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGS 314

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EIN 396
           +L+ A+ + G  ++A  IF      + V    +I    +    EEA+K+++  ++  ++N
Sbjct: 315 ALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVN 374

Query: 397 PDSFVCSSLLNACANLSAYEQ----GKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSID 451
            D++V   LL+A A  S  E+    G+ VH H+++ G      A  N LVNMYAKCG+I+
Sbjct: 375 ADTYVV--LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIE 432

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A + F  +     +SW+ +I  L Q+G  +EA+  +  M +  + P++  L+S L +C 
Sbjct: 433 SASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSC- 491

Query: 512 HAGL-VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
            AGL +  A         K+G+         ++ + G  G   +  ++ ++M      S 
Sbjct: 492 -AGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVS- 549

Query: 571 WGALLG 576
           W  ++G
Sbjct: 550 WNTMMG 555



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 210/433 (48%), Gaps = 37/433 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C   K L  G QVH   V  G D D  V+N LV MY +CG   D  ++F+++ E   
Sbjct: 488 LSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDE 547

Query: 62  VSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSWN++          + E V  F  M+  G+ PN+ +  +++ A +      LG+++H 
Sbjct: 548 VSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHA 607

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHND 179
             +K G   D    NAL+  YAK G++     +F ++ +  D +SWN++I+G + + +  
Sbjct: 608 AVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+     M  S    +  T++  L ACA +   E G +LH   I+  ++SD +V   LV
Sbjct: 668 EAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALV 727

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KCG +D A  +F+ M ++N  +WN +ISG+ ++G   +A  +F  M R     D  
Sbjct: 728 DMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHV 787

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIV------NSLIDAYGKCGH 348
           T  +VL + +           HA  V+   E      D  I+      + +ID  G+ G 
Sbjct: 788 TFVSVLSACS-----------HAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGK 836

Query: 349 VEDAVKIFKESSAVD---------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           + D +K + +   ++         LVAC       +   LG EA ++ LE++ +  NP +
Sbjct: 837 I-DKIKEYIQRMPIEPNALIWRTVLVACRQSKDG-SNIDLGREASRVLLEIEPQ--NPVN 892

Query: 400 FVCSSLLNACANL 412
           +V +S  +A   +
Sbjct: 893 YVLASNFHAATGM 905



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 141/278 (50%), Gaps = 14/278 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           +L A +    L LG QVH  V+  G   D  V N+L+  YAK G+      LF  + + R
Sbjct: 589 LLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRR 648

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             +SWNS+ S Y++   L+EA+     M+ SG   +  + S ++NACA       G ++H
Sbjct: 649 DAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELH 708

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + I+   +SD+   +ALVDMY+K G ++ A  +F  +   +  SWN++I+G   H    
Sbjct: 709 AFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGR 768

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL------HCSLIKMEIKSDPI 233
            A+++F++M  S  +P+  T+ S L AC+   L E G +       H  L ++E  S   
Sbjct: 769 KAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYS--- 825

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
               ++D+  + G +D+ +     MP E N + W  V+
Sbjct: 826 ---CVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVL 860



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 1/173 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S   L  G+++H   + +  +SD  V ++LV MY+KCG    + +LF+++ +R+
Sbjct: 691 ILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRN 750

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SWNS+ S Y       +A+  F+EM+ S   P+  +  S+++AC+ +G    G +   
Sbjct: 751 EFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE 810

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
                G    +   + ++D+  + G ++      + +   P+ + W  V+  C
Sbjct: 811 MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVAC 863


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/708 (38%), Positives = 402/708 (56%), Gaps = 39/708 (5%)

Query: 103 INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEH- 159
           +N  A   D    ++IH   IK G  + +F+ + L++  A     +L  A+++F  I H 
Sbjct: 29  LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88

Query: 160 -PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            P+I  WN +I    L      +L LF QM  S + PN  T+ S  K+CA  +     +Q
Sbjct: 89  PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSM------------------------------ 248
           LH   +K+ +   P V   L+ MY++ G +                              
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208

Query: 249 -DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
            D+AR +F  +P K++++WN +I+G++Q+G   EA + F  M    V  +Q+T+ +VL +
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
               +++ + K + +      F  +  +VN+L+D Y KCG +  A K+F      D++  
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW 328

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            +MI  Y    L EEAL L+  M    + P+     ++L ACA+L A + GK VH +I K
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK 388

Query: 428 ----FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
                G +++     S++ MYAKCG ++ A++ F  +  R + SW+AMI GLA +G  + 
Sbjct: 389 NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAER 448

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL +F +M+ +G  P+ IT V VL AC  AG V     +F SM K +GI P  +HY CMI
Sbjct: 449 ALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMI 508

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+L R+GKF EA  L+  M  + + ++WG+LL A RI+  VE G++ AE LF +EPE S 
Sbjct: 509 DLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSG 568

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +VLLSNIYA AG WD+VAK+R  + D  +KK PG + IE+   V+ F VGD+ H +S+ 
Sbjct: 569 AYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSEN 628

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           I+  LDEV  LL + G+VP     L+D++E  KE  L  HSEKLA+AFGLI+T PG+TIR
Sbjct: 629 IFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIR 688

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + KNLR+C +CH++ + ISKI +REII RD NRFHHF++G CSC   W
Sbjct: 689 IVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 231/508 (45%), Gaps = 45/508 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPER--SVVSWNSLFSCY 71
           Q+H +++ +G  +  F  + L+   A     +   +  LF +I  +  ++  WN+L   +
Sbjct: 43  QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
                   ++  F +M+ SG+ PN  +  S+  +CA S  +   +++H +++KL      
Sbjct: 103 SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHP 162

Query: 132 FSANALVDMYAKVGNL-------------------------------EDAVAVFKDIEHP 160
               +L+ MY++VG L                               +DA  +F +I   
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK 222

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           D+VSWNA+IAG V     + AL  F +M+ ++++PN  T  S L AC  +   ELG+ + 
Sbjct: 223 DVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIG 282

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             +       +  +   LVDMY+KCG +  AR +F  M +K++I WN +I G+       
Sbjct: 283 SWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYE 342

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK----TAFESDDYIV 336
           EA  LF  M RE V  +  T   VL + AS  A+ + K VHA   K    T   ++  + 
Sbjct: 343 EALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLW 402

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            S+I  Y KCG VE A ++F+   +  L +  +MI+  A  G  E AL L+ EM +    
Sbjct: 403 TSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQ 462

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           PD      +L+AC      E G +    + K +G          ++++ A+ G  D+A  
Sbjct: 463 PDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKV 522

Query: 456 AFSEI---PDRGIVSWSAMIGGLAQHGR 480
               +   PD  I  W +++     HG+
Sbjct: 523 LMGNMEMEPDGAI--WGSLLNACRIHGQ 548



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 215/459 (46%), Gaps = 51/459 (11%)

Query: 18  HGIVVF---TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           H  +VF   T  D+  F A  L+  Y   G+  D+RRLFD IP + VVSWN++ + YV  
Sbjct: 180 HARLVFDKSTLRDAVSFTA--LITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQS 237

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
              EEA+  F  M  + + PN+ ++ S+++AC       LG+ I  +    G+  ++   
Sbjct: 238 GRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLV 297

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG-CVLHEHNDWALKLFQQMKSSEI 193
           NALVDMY+K G +  A  +F  +E  D++ WN +I G C L  + + AL LF+ M    +
Sbjct: 298 NALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEE-ALVLFEVMLRENV 356

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL----VDMYAKCGSMD 249
            PN  T+ + L ACA +   +LG+ +H  + K    +  +  V L    + MYAKCG ++
Sbjct: 357 TPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVE 416

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M  ++L +WN +ISG   NG    A  LF  M  EG   D  T   VL +  
Sbjct: 417 VAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSA-- 474

Query: 310 SFQAIGVCKQVHALSVKTAFESD---DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                  C Q   + +   + S    DY ++  +  YG                      
Sbjct: 475 -------CTQAGFVELGHRYFSSMNKDYGISPKLQHYG---------------------- 505

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
              MI   A+ G  +EA  L   M + E+ PD  +  SLLNAC      E G+ V   + 
Sbjct: 506 --CMIDLLARSGKFDEAKVL---MGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLF 560

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +     ++ A   L N+YA  G  DD  +  +++ D+G+
Sbjct: 561 ELE-PENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGM 598



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 138/259 (53%), Gaps = 5/259 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC   + L LG  +   V   GF  +  + N+LV MY+KCG    +R+LFD + ++ 
Sbjct: 265 VLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKD 324

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+ WN++   Y H    EEA+  F+ M+   + PN+ +  +++ ACA  G   LG+ +H 
Sbjct: 325 VILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHA 384

Query: 121 YSIK----LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           Y  K     G  +++    +++ MYAK G +E A  VF+ +    + SWNA+I+G  ++ 
Sbjct: 385 YIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNG 444

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H + AL LF++M +    P+  T+   L AC      ELG +   S+ K    S  +   
Sbjct: 445 HAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHY 504

Query: 237 G-LVDMYAKCGSMDEARMI 254
           G ++D+ A+ G  DEA+++
Sbjct: 505 GCMIDLLARSGKFDEAKVL 523


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 404/683 (59%), Gaps = 14/683 (2%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +++ C  +G     R +HG+ +K G  +DMF A +LV+ Y + G  +DA ++F  +   +
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +V+W A+I G  ++     AL++F +M  +   P+ +T  + L AC+     +LG Q+H 
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHG 203

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK    S   +G  L  MYAK GS++ A   F ++P+KN+I W  +IS   ++    E
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 282 AA-SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
              +LF  M  +GV  ++ TL++V+    +   + + KQV A   K   +++  + NS +
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTM 323

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLE 389
             Y + G  ++A++ F+E   V ++   +MI+ YAQ              G +ALK++  
Sbjct: 324 YLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN 383

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           ++   + PD F  SS+L+ C+++ A EQG+Q+H   IK GF+SD    ++LVNMY KCG 
Sbjct: 384 LKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+DA +AF E+  R +V+W++MI G +QHGR +EA+Q+F  M   GV PN IT V VL A
Sbjct: 444 IEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSA 503

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C++AGL  +A+H+F+ M++++ I+P+ +HY CM+D+  R G+  +A   +    F+ N +
Sbjct: 504 CSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEA 563

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W +L+   R + N+E+  +AA+ L  + P+   T+VLL N+Y S   W +VA+VR+ MK
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMK 623

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              L      SWI +KDKVY F   D++H  S E+Y  L+ + +     GY P    +L 
Sbjct: 624 QEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAELS 683

Query: 690 DVEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           D E+ +K     + HHSE+LAVA GL+ TPPGAT+RV KN+ +C DCH+S +F S + +R
Sbjct: 684 DSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLLANR 743

Query: 748 EIIVRDVNRFHHFRNGSCSCGGY 770
           EI+VRD  R H F++G CSCG +
Sbjct: 744 EIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 164/512 (32%), Positives = 272/512 (53%), Gaps = 24/512 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C     L     +HG +V TG  +D FVA SLV  Y +CG   D+R LFD +PE++
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L + Y     L EA+  F EM+ +G  P+ ++L +M+NAC+ S ++ LG ++HG
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHG 203

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE-HND 179
           Y+IK    S     N+L  MYAK G+LE A+  F+ +   ++++W  +I+ C   E + +
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L LF  M    + PN FT TS +  C       LG+Q+     K+  +++  V    +
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTM 323

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPW 288
            +Y + G  DEA   F  M + ++I WN +ISG+ Q                +A  +F  
Sbjct: 324 YLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN 383

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           + R  +  D  T S++L   +S  A+   +Q+HA ++KT F SD  + ++L++ Y KCG 
Sbjct: 384 LKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLL 406
           +EDA K F E S   LV  TSMI+ Y+Q G  +EA++L+ +M+   + P+  +FVC  +L
Sbjct: 444 IEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVC--VL 501

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDA---DRAFSEIP 461
           +AC+     E+ +  +  ++K  +  +    +   +V+M+ + G +DDA    R     P
Sbjct: 502 SACSYAGLAEKAEH-YFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +  I  WS+++ G   HG  + A     +++E
Sbjct: 561 NEAI--WSSLVAGCRSHGNMELAFYAADRLIE 590



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 198/455 (43%), Gaps = 62/455 (13%)

Query: 200 YTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           Y   L  C  +E   LG  R LH  ++K    +D  V   LV+ Y +CG+  +AR +F  
Sbjct: 81  YVPLLHVC--VETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQ 138

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MPEKN++ W  +I+G+  N   +EA  +F  M   G      TL  +L + ++     + 
Sbjct: 139 MPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLG 198

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ- 376
            QVH  ++K    S   I NSL   Y K G +E A++ F+     +++  T+MI+A A+ 
Sbjct: 199 SQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAED 258

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
               E  L L+L+M    + P+ F  +S+++ C        GKQV     K G  ++   
Sbjct: 259 ENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPV 318

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ-----------HGRGKEAL 485
            NS + +Y + G  D+A R F E+ D  I++W+AMI G AQ             RG +AL
Sbjct: 319 KNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQAL 378

Query: 486 QMFGQMLEDGVLPNHITLVSVLCAC----------------------------------- 510
           ++F  +    + P+  T  S+L  C                                   
Sbjct: 379 KVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMY 438

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF---QAN 567
           N  G + +A   F  M  +  +      +  MI    + G+ QEA++L + M F   + N
Sbjct: 439 NKCGCIEDATKAFVEMSIRTLVT-----WTSMISGYSQHGRPQEAIQLFEDMRFAGVRPN 493

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEML---FAIEP 599
              +  +L A       E  +H  +M+   + IEP
Sbjct: 494 EITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEP 528



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 161/334 (48%), Gaps = 12/334 (3%)

Query: 266 WNIVISGHLQNGGDMEAASLFPW-------MYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           WN       QNG  MEA  L P        M REG          +L       ++G  +
Sbjct: 40  WNGRSIQAAQNGSTMEAP-LRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGAR 98

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            +H   VKT   +D ++  SL++AY +CG  +DA  +F +    ++V  T++IT Y    
Sbjct: 99  ALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNS 158

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              EAL++++EM +    P  +   ++LNAC+  +  + G QVH + IK+  +S T  GN
Sbjct: 159 QLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGN 218

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE-ALQMFGQMLEDGVL 497
           SL  MYAK GS++ A RAF  +PD+ +++W+ MI   A+     E  L +F  ML DGVL
Sbjct: 219 SLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVL 278

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           PN  TL SV+  C    L        ++   K G Q         + +  R G+  EAM 
Sbjct: 279 PNEFTLTSVMSLCG-TRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMR 337

Query: 558 LVDTMPFQANASVWGALL-GAARIYKNVEVGQHA 590
             + M    +   W A++ G A+I +  +   HA
Sbjct: 338 FFEEMD-DVSIITWNAMISGYAQIMETAKDDLHA 370


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/617 (41%), Positives = 371/617 (60%), Gaps = 22/617 (3%)

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H  +AL  +  M+  +I  + F   S LKAC+ + +  +G+++H   +K  + SD  V  
Sbjct: 89  HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI----------------------SGHL 274
            L+ MY++CGS+  AR++F  M E+++++W+ +I                      +G++
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           +     E   LF  M  E V  +  T+ +++ S     A+ + K++HA  ++  F     
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           +  +L+D YGKCG +  A  IF      D++  T+MI+AYAQ    + A +L+++M+D  
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNG 328

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           + P+     SLL+ CA   A + GK  H +I K G   D     +L++MYAKCG I  A 
Sbjct: 329 VRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQ 388

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           R FSE  DR I +W+ M+ G   HG G++AL++F +M   GV PN IT +  L AC+HAG
Sbjct: 389 RLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAG 448

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           LV E K  FE M   FG+ P  EHY CM+D+LGRAG   EA +++++MP   N ++WGA+
Sbjct: 449 LVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAM 508

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           L A +I+KN  +G+ AA  L A+EP+     VL+SNIYA+A  W++VA +R+ +KD  +K
Sbjct: 509 LAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIK 568

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           KEPGMS IEV   V+ F +GD +H   ++I   L E+S  L +AGY+P     LH+++E 
Sbjct: 569 KEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEE 628

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           EKE  L +HSEKLA+AFGLI+T PG  IRV KNLRIC DCHT  + +SKI  R IIVRD 
Sbjct: 629 EKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDR 688

Query: 755 NRFHHFRNGSCSCGGYW 771
           NRFHHFR GSCSCGGYW
Sbjct: 689 NRFHHFREGSCSCGGYW 705



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 212/425 (49%), Gaps = 37/425 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VLKAC+      +G ++HG  V  G  SD FV N+L+ MY++CG+ + +R LFD + ER 
Sbjct: 115 VLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERD 174

Query: 60  ---------------------SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
                                S+VSW ++ + Y+ C+ LEE    F  M+   + PN+ +
Sbjct: 175 VVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDIT 234

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           + S+I +C   G   LG+++H Y ++ G+   +  A ALVDMY K G +  A A+F  ++
Sbjct: 235 MLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMK 294

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
           + D+++W A+I+        D+A +LF QM+ + + PN  T  S L  CA     ++G+ 
Sbjct: 295 NKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKW 354

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
            H  + K  ++ D I+   L+DMYAKCG +  A+ +F    ++++  WN++++G+  +G 
Sbjct: 355 FHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGY 414

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVC-KQVHALSVKTAFESDD 333
             +A  LF  M   GV  +  T    L + +      +  G+  K +H   +    E   
Sbjct: 415 GEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH-- 472

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF----GLGEEALK--LY 387
                ++D  G+ G +++A K+ +       +A    + A  +      +GE A +  L 
Sbjct: 473 --YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLA 530

Query: 388 LEMQD 392
           LE Q+
Sbjct: 531 LEPQN 535



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 196/411 (47%), Gaps = 24/411 (5%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           I  + F + S++ AC+    + +G++IHG+S+K G  SD+F  NAL+ MY++ G+L  A 
Sbjct: 105 IEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSAR 164

Query: 152 AVFKDIEHPD----------------------IVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            +F  +   D                      IVSW A+IAG +     +   +LF +M 
Sbjct: 165 LLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              + PN  T  S + +C  +   +LG++LH  +++        +   LVDMY KCG + 
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIR 284

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR IF  M  K+++ W  +IS + Q      A  LF  M   GV  ++ T+ ++L   A
Sbjct: 285 SARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCA 344

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A+ + K  HA   K   E D  +  +LID Y KCG +  A ++F E+   D+     
Sbjct: 345 VNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNV 404

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KF 428
           M+  Y   G GE+ALKL+ EM+   + P+       L+AC++     +GK +   +I  F
Sbjct: 405 MMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDF 464

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           G +        +V++  + G +D+A +    +P    I  W AM+     H
Sbjct: 465 GLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/673 (39%), Positives = 399/673 (59%), Gaps = 57/673 (8%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           MI++ A  G   L R    +   L  + D  S N ++  Y + G +E+A  +F      D
Sbjct: 12  MISSHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWD 67

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLH 220
           ++SWNA+++G V       A +LF +M   ++ + N+     A +     ++ E  R   
Sbjct: 68  VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG----DMVEARRLFD 123

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
            + ++     D      +V  YA+ G ++EAR +F  MPE+N ++WN +++ ++Q     
Sbjct: 124 AAPVR-----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 178

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  LF  M                ++VAS+                         N+++
Sbjct: 179 EAKELFNMM--------------PCRNVASW-------------------------NTML 199

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD--REINPD 398
             Y + G +E+A  +F      D V+  +M+ AY+Q G  EE L+L++EM      +N  
Sbjct: 200 TGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS 259

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           +F C  +L+ CA+++A E G Q+H  +I+ G+    F GN+L+ MY KCG+++DA  AF 
Sbjct: 260 AFAC--VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFE 317

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           E+ +R +VSW+ MI G A+HG GKEAL++F  M      P+ ITLV VL AC+H+GLV +
Sbjct: 318 EMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEK 377

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
              +F SM   FG+    EHY CMID+LGRAG+  EA +L+  MPF+ ++++WGALLGA+
Sbjct: 378 GISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGAS 437

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI++N E+G+ AAE +F +EPE +  +VLLSNIYAS+G W +  K+R  M++  +KK PG
Sbjct: 438 RIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPG 497

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            SWIEV++KV+TF+ GD  H   ++IYA L+++   + KAGYV   +  LHDVEE EKE 
Sbjct: 498 FSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEH 557

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
           +L +HSEKLAVA+G++  PPG  IRV KNLR+C DCH +F++IS I  R I++RD NRFH
Sbjct: 558 MLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFH 617

Query: 759 HFRNGSCSCGGYW 771
           HFR GSCSCG YW
Sbjct: 618 HFRGGSCSCGDYW 630



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 204/454 (44%), Gaps = 49/454 (10%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + D    N ++  Y + G   ++R LF++  E  V+SWN+L S YV    + EA   F  
Sbjct: 34  EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 93

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M    +     S + M++  A  GD +  R++           D+F+  A+V  YA+ G 
Sbjct: 94  MPGRDV----VSWNIMVSGYARRGDMVEARRL----FDAAPVRDVFTWTAVVSGYAQNGM 145

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           LE+A  VF  +   + VSWNA++A  +     D A +LF  M       N+ ++ + L  
Sbjct: 146 LEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTG 201

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
                                              YA+ G ++EA+ +F  MP+K+ ++W
Sbjct: 202 -----------------------------------YAQAGMLEEAKAVFDTMPQKDAVSW 226

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +++ + Q G   E   LF  M R G   +++  + VL + A   A+    Q+H   ++
Sbjct: 227 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 286

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
             +    ++ N+L+  Y KCG++EDA   F+E    D+V+  +MI  YA+ G G+EAL++
Sbjct: 287 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 346

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYA 445
           +  M+     PD      +L AC++    E+G      +   FG  +       ++++  
Sbjct: 347 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 406

Query: 446 KCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           + G + +A     ++P +     W A++G    H
Sbjct: 407 RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 440



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 192/442 (43%), Gaps = 62/442 (14%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N +V  YA+ G+ +++RRLFDA P R V +W ++ S Y     LEEA   F  M      
Sbjct: 103 NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----E 158

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD----SDMFSANALVDMYAKVGNLED 149
            N  S ++M+ A        + R++   + +L ++     ++ S N ++  YA+ G LE+
Sbjct: 159 RNAVSWNAMVAA-------YIQRRMMDEAKEL-FNMMPCRNVASWNTMLTGYAQAGMLEE 210

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A AVF  +   D VSW A++A       ++  L+LF +M       N   +   L  CA 
Sbjct: 211 AKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCAD 270

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   E G QLH  LI+        VG  L+ MY KCG+M++AR  F  M E+++++WN +
Sbjct: 271 IAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 330

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF----QAIGVCKQVHALSV 325
           I+G+ ++G   EA  +F  M       D  TL  VL + +      + I     +H    
Sbjct: 331 IAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH---- 386

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
                  D+ V +  + Y                        T MI    + G   EA  
Sbjct: 387 ------HDFGVTAKPEHY------------------------TCMIDLLGRAGRLAEAHD 416

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNM 443
           L   M+D    PDS +  +LL A       E G+     I +   +    AG    L N+
Sbjct: 417 L---MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFE---LEPENAGMYVLLSNI 470

Query: 444 YAKCGSIDDADRAFSEIPDRGI 465
           YA  G   DA +    + +RG+
Sbjct: 471 YASSGKWRDARKMRVMMEERGV 492



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 7/214 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L  G+Q+HG ++  G+    FV N+L+ MY KCGN  D+R  F+ + ER 
Sbjct: 264 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 323

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VVSWN++ + Y    F +EA+  F  M  +  +P++ +L  ++ AC+ SG  L+ + I +
Sbjct: 324 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG--LVEKGISY 381

Query: 120 GYSI--KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            YS+    G  +       ++D+  + G L +A  + KD+   PD   W A++    +H 
Sbjct: 382 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 441

Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           + +      +++   E  N  M+   S + A +G
Sbjct: 442 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 475



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 58/306 (18%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP ++ + +N++IS H  +G                           L S+A        
Sbjct: 1   MPVRDSVTYNVMISSHANHG---------------------------LVSLAR------- 26

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
              H   +  A E D    N ++ AY + G VE+A  +F   +  D+++  ++++ Y Q+
Sbjct: 27  ---HYFDL--APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 81

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV-HIIKFGFMSDTFA 436
           G   EA +L+  M  R++   + + S             +G  V    +     + D F 
Sbjct: 82  GKMSEARELFDRMPGRDVVSWNIMVSGYA---------RRGDMVEARRLFDAAPVRDVFT 132

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             ++V+ YA+ G +++A R F  +P+R  VSW+AM+    Q     EA ++F  M     
Sbjct: 133 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----P 188

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
             N  +  ++L     AG++ EAK  F++M +K  +      +A M+    + G  +E +
Sbjct: 189 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETL 243

Query: 557 ELVDTM 562
           +L   M
Sbjct: 244 QLFIEM 249


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 407/683 (59%), Gaps = 4/683 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ACT    +  G Q+HG VV +GFD D +V  SL+  Y+K GN  ++R +FD + E++
Sbjct: 135 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT 194

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ + Y  C     ++  F +M  + + P+ + +SS+++AC+       G++IH 
Sbjct: 195 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 254

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G + D+   N L+D Y K   ++    +F  +   +I+SW  +I+G  +    DW
Sbjct: 255 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG-YMQNSFDW 313

Query: 181 -ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+KLF +M      P+ F  TS L +C   E  E GRQ+H   IK  ++SD  V  GL+
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK   + +A+ +F +M E+N+I++N +I G+       EA  LF  M          
Sbjct: 374 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLL 433

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L   AS  A+ + KQ+H L +K     D +  ++LID Y KC +V+DA  +F+E 
Sbjct: 434 TFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 493

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D+V   +M   Y Q    EEALKLY  +Q     P+ F  ++L+ A +NL++   G+
Sbjct: 494 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 553

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q H  ++K G     F  N+LV+MYAKCGSI++A + F+    R +V W++MI   AQHG
Sbjct: 554 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 613

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +EAL MF +M+++G+ PN++T V+VL AC+HAG V +  +HF SM   FGI+P  EHY
Sbjct: 614 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHY 672

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++ +LGR+GK  EA E ++ MP +  A VW +LL A RI  NVE+G++AAEM  + +P
Sbjct: 673 ACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDP 732

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           + S +++LLSNI+AS GMW +V KVR  M  +++ KEPG SWIEV +KV  F   D +H 
Sbjct: 733 KDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH- 791

Query: 660 RSKEIYAKLDEVSDLLNKAGYVP 682
           R  +I + LD +   +  AGYVP
Sbjct: 792 READIGSVLDILIQHIKGAGYVP 814



 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 186/558 (33%), Positives = 310/558 (55%), Gaps = 13/558 (2%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +HG ++ +G  SD F+AN L+ + +K     ++R +FD +P +++++W+S+ S Y    +
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108

Query: 77  LEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            EEA+  F ++   SG  PNEF L+S+I AC   G    G ++HG+ ++ G+D D++   
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 168

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+D Y+K GN+E+A  VF  +     V+W  +IAG      +  +L+LF QM+ + + P
Sbjct: 169 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + +  +S L AC+ +E  E G+Q+H  +++   + D  V   L+D Y KC  +   R +F
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  KN+I+W  +ISG++QN  D EA  LF  M R G   D    ++VL S  S +A+ 
Sbjct: 289 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             +QVHA ++K   ESD+++ N LID Y K   + DA K+F   +  ++++  +MI  Y+
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
                 EAL+L+ EM+ R   P      SLL   A+L A E  KQ+H  IIKFG   D F
Sbjct: 409 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLF 468

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
           AG++L+++Y+KC  + DA   F E+ ++ IV W+AM  G  QH   +EAL+++  +    
Sbjct: 469 AGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSR 528

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
             PN  T  +++ A ++   +A  +H   F +   K G+         ++D+  + G  +
Sbjct: 529 QKPNEFTFAALITAASN---LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 585

Query: 554 EAMELVDTMPFQANASVW 571
           EA ++        N+S+W
Sbjct: 586 EARKMF-------NSSIW 596



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 259/490 (52%), Gaps = 7/490 (1%)

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           +  +RP     ++++         +  + IHG  I  G  SD F AN L+++ +K   ++
Sbjct: 20  IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 79

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF--QQMKSSEINPNMFTYTSALKA 206
           +A  VF  + H ++++W+++++      +++ AL +F   Q KS E +PN F   S ++A
Sbjct: 80  NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGE-HPNEFVLASVIRA 138

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C  + + E G QLH  +++     D  VG  L+D Y+K G+++EAR++F  + EK  + W
Sbjct: 139 CTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW 198

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I+G+ + G    +  LF  M    V  D+  +S+VL + +  + +   KQ+HA  ++
Sbjct: 199 TTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLR 258

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              E D  +VN LID Y KC  V+   K+F +    ++++ T+MI+ Y Q     EA+KL
Sbjct: 259 RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKL 318

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + EM      PD F C+S+L +C +  A EQG+QVH + IK    SD F  N L++MYAK
Sbjct: 319 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 378

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
              + DA + F  + ++ ++S++AMI G +   +  EAL++F +M      P+ +T VS+
Sbjct: 379 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSL 438

Query: 507 LCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           L     A L A E       +  KFG+       + +ID+  +    ++A  + + M  +
Sbjct: 439 LGVS--ASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-E 495

Query: 566 ANASVWGALL 575
            +  VW A+ 
Sbjct: 496 KDIVVWNAMF 505



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +Q   + P     ++LL    + +     K +H  II  G  SDTF  N L+N+ +K   
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLC 508
           +D+A   F ++P + +++WS+M+   +Q G  +EAL +F  +  + G  PN   L SV+ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 509 ACNHAGLVAE-AKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQ 565
           AC   G+V + A+ H   +   F     Q+ Y    +ID   + G  +EA  + D +  +
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFD----QDVYVGTSLIDFYSKNGNIEEARLVFDQLS-E 192

Query: 566 ANASVWGALLGA 577
             A  W  ++  
Sbjct: 193 KTAVTWTTIIAG 204


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 250/628 (39%), Positives = 379/628 (60%), Gaps = 3/628 (0%)

Query: 147 LEDAVAVFKDIEHPDIVS--WNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSA 203
           L  AV++F+    P + +  +N ++   +   H + AL LF +M   + + P+  T   A
Sbjct: 66  LPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACA 125

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           LK+C+ M   ++GR +    +K  + +D  V   L+ MYA C  +  A+++F  + E  +
Sbjct: 126 LKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGV 185

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           + WN +I+ +++NG  ME   +F  M   GV FD+ TL +V+ +        + K V   
Sbjct: 186 VMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEY 245

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
             +     +  ++ +LID Y KCG +  A ++F    + D+VA ++MI+ Y Q     EA
Sbjct: 246 VDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 305

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+ EMQ  E+ P+     S+L+ACA L A E GK VH +I +         G +LV+ 
Sbjct: 306 LALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDF 365

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG IDDA  AF  +P +   +W+A+I G+A +GRG+EAL++F  M +  + P  +T 
Sbjct: 366 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTF 425

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           + VL AC+H+ LV E + HF+SM + +GI+P  EHY C++D+LGRAG   EA + + TMP
Sbjct: 426 IGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMP 485

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            + NA +W ALL +  ++KNVE+G+ A + + ++ P  S  ++LLSNIYAS G W N A 
Sbjct: 486 IEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAM 545

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R+ MKD  ++K PG S IE+   V  F   D  H + KEIY K++E+ D +  AGY+P 
Sbjct: 546 IRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPN 605

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
                 +V+E EKE  + HHSEKLA+AFGL+   PGATIR+ KNLR+C DCH++ + ISK
Sbjct: 606 TADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISK 665

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + +REI+VRD NRFHHF++G+CSC  YW
Sbjct: 666 VYNREIVVRDRNRFHHFKDGTCSCNDYW 693



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 223/471 (47%), Gaps = 48/471 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK+C+    L +G  +    V  G  +D FV +SL+ MYA C +   ++ LFDA+ E  V
Sbjct: 126 LKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGV 185

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V WN++ + Y+      E V  FK M+  G+  +E +L S++ AC   GD+ LG+ +  Y
Sbjct: 186 VMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEY 245

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             + G   +     AL+DMYAK G L  A  +F  ++  D+V+W+A+I+G    +    A
Sbjct: 246 VDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 305

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF +M+ +E+ PN  T  S L ACA +   E G+ +H  + +  +    I+G  LVD 
Sbjct: 306 LALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDF 365

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCG +D+A   F  MP KN   W  +I G   NG   EA  LF  M +  +     T 
Sbjct: 366 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTF 425

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTA---FES--DDYIVNSLIDAYGKCGHVEDAVKIF 356
             VL + +           H+  V+     F+S   DY +    + YG            
Sbjct: 426 IGVLMACS-----------HSCLVEEGRRHFDSMTQDYGIKPRAEHYG------------ 462

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                VDL+    +I    QF            ++   I P++ +  +LL++CA     E
Sbjct: 463 ---CVVDLLGRAGLIDEAYQF------------IRTMPIEPNAVIWRALLSSCAVHKNVE 507

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
            G++    I+    ++ + +G+ ++  N+YA  G   +A     E+ DRGI
Sbjct: 508 IGEEALKQIVS---LNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGI 555



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 218/438 (49%), Gaps = 10/438 (2%)

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLG 115
           P  S   +N L    +H    E+A+  F EM+ ++ + P++ +++  + +C+      +G
Sbjct: 79  PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R I  Y++K G  +D F  ++L+ MYA   ++  A  +F  +E   +V WNA+I   +  
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYM-- 196

Query: 176 EHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           ++ +W   +++F+ M    +  +  T  S + AC  +   +LG+ +   + +  +  +  
Sbjct: 197 KNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN 256

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   L+DMYAKCG + +AR +F  M  ++++AW+ +ISG+ Q     EA +LF  M    
Sbjct: 257 LMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE 316

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  +  T+ +VL + A   A+   K VH+   +        +  +L+D Y KCG ++DAV
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           + F+     +    T++I   A  G G EAL+L+  M+   I P       +L AC++  
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436

Query: 414 AYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAM 471
             E+G++    + + +G          +V++  + G ID+A +    +P +   V W A+
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496

Query: 472 IGGLAQHGR---GKEALQ 486
           +   A H     G+EAL+
Sbjct: 497 LSSCAVHKNVEIGEEALK 514



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 137/273 (50%), Gaps = 2/273 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC    D  LG  V   V   G   +  +  +L+ MYAKCG    +RRLFD +  R 
Sbjct: 226 VVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRD 285

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+++ S Y   D   EA+  F EM L+ + PN+ ++ S+++ACA  G    G+ +H 
Sbjct: 286 VVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHS 345

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +      +    ALVD YAK G ++DAV  F+ +   +  +W A+I G   +     
Sbjct: 346 YIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGRE 405

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
           AL+LF  M+ + I P   T+   L AC+   L E GR+   S+ +   IK        +V
Sbjct: 406 ALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVV 465

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
           D+  + G +DEA      MP E N + W  ++S
Sbjct: 466 DLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/635 (40%), Positives = 395/635 (62%), Gaps = 5/635 (0%)

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           + +  +   L++A+ +   I+ P    ++ +I  C+         K+ Q +K S   P +
Sbjct: 46  IHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGL 105

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           F     L+  A  +     ++L   + + ++ S  I    L+  YAK G + EA+ +F  
Sbjct: 106 FILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNI----LISGYAKMGLLQEAKSLFDK 161

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGV 316
           MPE++  +W  +ISG++++    EA  LF  M R +    ++ T+S+ L + A+   + +
Sbjct: 162 MPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRI 221

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K++H   ++T  +SD+ + ++L D YGKCG +E+A  IF +    D+V  T+MI  Y Q
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  +E   L+ ++    I P+ F  S +LNACAN ++ E GK+VH ++ + GF   +FA
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFA 341

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            ++LV+MY+KCG++  A+R F E P   + SW+++I G AQ+G+  EA++ F  +++ G 
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+HIT V VL AC HAGLV +   +F S+++++G+    +HYAC+ID+L R+G+F EA 
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
            ++  M  + +  +W +LLG  RI+ N+++ Q AAE LF IEPE  +T+V L+NIYA+AG
Sbjct: 462 NIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAG 521

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
           MW  VAK+R+ M D  + K+PG+SWI +K  V+ F VGD SH +SKEI   L ++S  + 
Sbjct: 522 MWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMK 581

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + G+VP     LHDVE+ +KEQ L +HSEKLAVAFG+I+TP G  I+V KNLR CVDCHT
Sbjct: 582 EEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHT 641

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + +FISKI +R+IIVRD NRFH F +G CSC  YW
Sbjct: 642 AIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 249/550 (45%), Gaps = 88/550 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++++C   + L  G +VH  +  +GF    F+ N L+ MYAKC + +DS++LFD +PER 
Sbjct: 76  LIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERD 135

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGI----RPNE---------- 96
           + SWN L S Y     L+EA   F +M          ++SG     RPNE          
Sbjct: 136 LCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKR 195

Query: 97  --------FSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                   F++SS + A A      +G++IHGY ++ G DSD    +AL DMY K G++E
Sbjct: 196 SDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIE 255

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +   DIV+W A+I              LF  +  S I PN FT++  L ACA
Sbjct: 256 EARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACA 315

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
               +ELG+++H  + ++           LV MY+KCG+M  A  +F   P+ +L +W  
Sbjct: 316 NQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTS 375

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I+G+ QNG   EA   F  + + G   D  T   VL + A           HA  V   
Sbjct: 376 LIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACA-----------HAGLVDKG 424

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
               DY  +S+ + YG              +   D  AC  +I   A+ G  +EA  +  
Sbjct: 425 L---DYF-HSIKEQYGL-------------THTADHYAC--IIDLLARSGQFDEAENIIS 465

Query: 389 EMQDREINPDSFVCSSLLNAC---ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +M    + PD F+ +SLL  C    NL   ++  +    I       +     +L N+YA
Sbjct: 466 KMS---MKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEP----ENPATYVTLANIYA 518

Query: 446 KCGSIDDADRAFSEIPDRGIV-----SWSAM-------IGGLAQHGRGKEALQMFG---- 489
             G   +  +    + DRG+V     SW A+       + G   H + KE  +  G    
Sbjct: 519 TAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSK 578

Query: 490 QMLEDGVLPN 499
           +M E+G +P+
Sbjct: 579 RMKEEGFVPD 588



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 240/475 (50%), Gaps = 43/475 (9%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           +P+    S++I +C  S     G+K+H +    G+   +F  N L++MYAK  +L D+  
Sbjct: 67  KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126

Query: 153 VFKDIEHPDIVSWN-------------------------------AVIAGCVLHEHNDWA 181
           +F ++   D+ SWN                               A+I+G V H+  + A
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEA 186

Query: 182 LKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           L+LF+ MK S+    N FT +SAL A A +    +G+++H  +++  + SD +V   L D
Sbjct: 187 LELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSD 246

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS++EAR IF  M +++++ W  +I  + Q+G   E   LF  + R G+  ++ T
Sbjct: 247 MYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFT 306

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S VL + A+  +  + K+VH    +  F+   +  ++L+  Y KCG++  A ++FKE+ 
Sbjct: 307 FSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP 366

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL + TS+I  YAQ G  +EA++ +  +      PD      +L+ACA+    ++G  
Sbjct: 367 QPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLD 426

Query: 421 VHVHIIK--FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGL 475
            + H IK  +G          ++++ A+ G  D+A+   S++   PD+ +  W++++GG 
Sbjct: 427 -YFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFL--WASLLGGC 483

Query: 476 AQHGRGKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
             HG  K A +    + E  + P N  T V++      AG+ +E     ++M+ +
Sbjct: 484 RIHGNLKLAQRAAEALFE--IEPENPATYVTLANIYATAGMWSEVAKIRKTMDDR 536


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/663 (39%), Positives = 390/663 (58%), Gaps = 6/663 (0%)

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
           D+   R +HG S+  GY +D F A+AL  +Y K+   +DA  VF  +  PD + WN ++A
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188

Query: 171 GCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           G    E    AL+ F +M  +  + P+  T  S+L+A A      +GR +H   +K  + 
Sbjct: 189 GLPGSE----ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLA 244

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
               V  GL+ +Y+KCG MD A+ +F  M   +L+A+N +ISG+  NG    +  LF  +
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKEL 304

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
              G   + +TL  V+   + F    + + +HA  VK   ++D  +  +L   Y +   +
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           E A  IF       + +  +MI+ YAQ GL E A+ L+  MQ+  + P+    SS L+AC
Sbjct: 365 ESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSAC 424

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           A+L A   GK VH  I K     + +   +L++MYAKCGSI +A   F  + ++ +VSW+
Sbjct: 425 AHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWN 484

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMI G   HG+G EAL+++  ML+  +LP   T +SV+ AC+H GLV E +  F  M  +
Sbjct: 485 AMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNE 544

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA-NASVWGALLGAARIYKNVEVGQ 588
           + I P  EH  CM+D+LGRAGK  EA+EL+   P  A    VWGALLGA  ++KN ++ +
Sbjct: 545 YRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAK 604

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
            A++ LF ++ E +  +VLLSN+Y S   +   A VR+  K  KL K PG + IE+ D+ 
Sbjct: 605 LASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRP 664

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F  GD  H +S+ IY+ L+ ++  + +AGY P+ E  L+DVEE EKE ++  HSEKLA
Sbjct: 665 HVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLA 724

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           +AFGL++T PG  IR+ KNLR+C+DCH + +FISK+  R I+VRD +RFHHFR+G CSCG
Sbjct: 725 IAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCG 784

Query: 769 GYW 771
            YW
Sbjct: 785 DYW 787



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 247/466 (53%), Gaps = 8/466 (1%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +HG+ V  G+ +D FVA++L  +Y K     D+R++FD +P    + WN+L +     + 
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEA 195

Query: 77  LEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           LE     F  MV +G +RP+  +L+S + A A +    +GR +HGY +K G         
Sbjct: 196 LEA----FVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            L+ +Y+K G+++ A  +F  +++PD+V++NA+I+G  ++   + +++LF+++ +S   P
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRP 311

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N  T  + +   +    + L R LH  ++K  + +D +V   L  +Y +   M+ AR IF
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M EK + +WN +ISG+ QNG    A +LF  M    V  +  T+S+ L + A   A+ 
Sbjct: 372 DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + K VH +  K   E + Y++ +LID Y KCG + +A  IF      ++V+  +MI+ Y 
Sbjct: 432 LGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG 491

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIKFGFMSDT 434
             G G EALKLY +M D  I P S    S++ AC++    ++G++V  V   ++      
Sbjct: 492 LHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGI 551

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS--WSAMIGGLAQH 478
                +V++  + G +++A    SE P   I    W A++G    H
Sbjct: 552 EHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVH 597



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 200/408 (49%), Gaps = 32/408 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+A      + +G  VHG  V  G    E V   L+ +Y+KCG+   ++ LFD +    +
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V++N+L S Y     +E +V  FKE+  SG RPN  +L ++I   +  G  LL R +H +
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +K   D+D   + AL  +Y ++ ++E A ++F  +    + SWNA+I+G   +   + A
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + LFQ M+   + PN  T +S L ACA +    LG+ +H  + K +++ +  V   L+DM
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDM 458

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCGS+ EAR IF  M  KN+++WN +ISG+  +G   EA  L+  M            
Sbjct: 459 YAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLD---------- 508

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           + +L + ++F ++     ++A S     +    +   + + Y     +E           
Sbjct: 509 ARILPTSSTFLSV-----IYACSHGGLVDEGQKVFRVMTNEYRITPGIEH---------- 553

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
                CT M+    + G   EAL+L  E     I P   V  +LL AC
Sbjct: 554 -----CTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGAC 594


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/572 (42%), Positives = 370/572 (64%), Gaps = 1/572 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y +A+ AC   +    GRQ+H  ++K   +    +   L+ +Y +CG++D+AR +   MP
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+N+++W  +ISG+ Q+G   EA  LF  M R G   ++ TL+TVL S    Q+I   +Q
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VH+L VKT FES  ++ +SL+D YGK G++++A K+F      D V+CT++I+ YAQ GL
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            +EAL L+ ++    +  +    ++LL + + L++   GKQVH  I++          NS
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+KCG +  + R F  +P R  +SW+AM+ G  +HG G+E +Q+F  M E+ V P+
Sbjct: 284 LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPD 342

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +TL++VL  C+H GLV E    F+ + K+        HY C+ID+LGR+G+ Q+A++L+
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           + MPF+   ++WG+LLGA R++ NV VG+  A+ L  +EP  +  +V+LSNIYA+AGMW 
Sbjct: 403 EHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWK 462

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +V +VR+ M +N + KEP  SWI +   ++TF   +R H R K+I AK+ EV   +  AG
Sbjct: 463 DVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAG 522

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP +   LHDV++ +KE++L  HSEKLA+ FGL+ TPPG TI+V KNLRICVDCH   +
Sbjct: 523 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAK 582

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+SK+  REI +RD NRFH  ++G+C+CG YW
Sbjct: 583 FVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 193/360 (53%), Gaps = 8/360 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC  ++ L  G QVH  +V   +    ++A  L+++Y +CG   D+R + D +PER+V
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ S Y       EA+  F  M+ +G + NEF+L++++ +C          ++H  
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +K  ++S MF  ++L+DMY K GN+++A  VF  +   D VS  A+I+G      +D A
Sbjct: 168 VVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEA 227

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF+Q+ SS +  N  T+T+ L + +G+     G+Q+H  +++ E+    ++   L+DM
Sbjct: 228 LDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDM 287

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KCG +  +R +F  MP+++ I+WN ++ G+ ++G   E   LF  M  E V  D  TL
Sbjct: 288 YSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTL 346

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYI----VNSLIDAYGKCGHVEDAVKIFK 357
             VL   +    +     +  L VK   E +  I       +ID  G+ G ++ A+ + +
Sbjct: 347 LAVLSGCSHGGLVDEGLDIFDLIVK---EQNAVIHIGHYGCVIDLLGRSGQLQKALDLIE 403



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 173/325 (53%), Gaps = 1/325 (0%)

Query: 103 INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI 162
           I AC        GR++H + +K  Y   ++ A  L+ +Y + G L+DA  V   +   ++
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           VSW A+I+G      +  AL+LF +M  +    N FT  + L +C   +  +   Q+H  
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           ++K   +S   VG  L+DMY K G++ EAR +F ++PE++ ++   +ISG+ Q G D EA
Sbjct: 168 VVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEA 227

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             LF  +Y  G+  +  T +T+L S++   ++   KQVH L ++        + NSLID 
Sbjct: 228 LDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDM 287

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y KCG +  + ++F        ++  +M+  Y + G+G+E ++L+  M + E+ PDS   
Sbjct: 288 YSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTL 346

Query: 403 SSLLNACANLSAYEQGKQVHVHIIK 427
            ++L+ C++    ++G  +   I+K
Sbjct: 347 LAVLSGCSHGGLVDEGLDIFDLIVK 371



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 140/263 (53%), Gaps = 8/263 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C   + +    QVH +VV T F+S  FV +SL+ MY K GN  ++R++FD +PER 
Sbjct: 148 VLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERD 207

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS  ++ S Y      +EA+  F+++  SG++ N  + ++++ + +G      G+++HG
Sbjct: 208 TVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHG 267

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++      +   N+L+DMY+K G L  +  VF ++     +SWNA++ G   H     
Sbjct: 268 LILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQE 327

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            ++LF+ M + E+ P+  T  + L  C+   L + G  +   ++K   + + ++ +G   
Sbjct: 328 VVQLFRTM-TEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK---EQNAVIHIGHYG 383

Query: 238 -LVDMYAKCGSMDEARMIFHLMP 259
            ++D+  + G + +A  +   MP
Sbjct: 384 CVIDLLGRSGQLQKALDLIEHMP 406


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/685 (37%), Positives = 401/685 (58%), Gaps = 8/685 (1%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDA 150
           +RP+ F+   ++ A  G   +    ++H  +++LG    ++F++ +LV  Y + G + +A
Sbjct: 65  LRPDSFTFPPLVRAAPGPASA---AQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF ++   D+ +WNA+++G   +     A+ L  +M    +  +  T +S L  C  +
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
             + L   +H   +K  +  +  V   L+D+Y K G + EA  +F  M  ++L+ WN +I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S + Q G    A  LF  M   GV  D  TL ++  +VA        K VH    +  ++
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301

Query: 331 SDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D I  N+++D Y K   ++ A K+F      D+V+  ++IT Y Q GL  EA+++Y +
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361

Query: 390 MQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           M + E + P      S+L A + L   +QG ++H   IK G   D +    L+++YAKCG
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCG 421

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            + +A   F  +P R    W+A+I GL  HG G +AL +F QM ++ + P+H+T VS+L 
Sbjct: 422 KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+HAGLV + +  F+ M+  +GI P+ +HY CM+D+LGRAG+  EA E + +MP + ++
Sbjct: 482 ACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDS 541

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           +VWGALLGA RI+ NVE+G+ A++ LF ++PE    +VL+SN+YA  G WD V  VR  +
Sbjct: 542 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLV 601

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRS--HARSKEIYAKLDEVSDLLNKAGYVPMVET 686
           +   L+K PG S +EVK  V  F  G ++  H + +EI   L ++   +  AGYVP    
Sbjct: 602 RRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSF 661

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            L DVEE EKEQ+L +HSE+LA+AFG+I TPPG  + + KNLR+C DCH++ ++ISKI  
Sbjct: 662 VLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITE 721

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           REIIVRD NRFHHF++G CSCG +W
Sbjct: 722 REIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 244/480 (50%), Gaps = 10/480 (2%)

Query: 16  QVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           Q+H   +  G    + F + SLV  Y + G   ++ R+FD +PER V +WN++ S     
Sbjct: 87  QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               +AV     MV  G+  +  +LSS++  C   GD  L   +H Y++K G   ++F  
Sbjct: 147 TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           NAL+D+Y K+G L +A  VF  +   D+V+WN++I+          A++LF  M  S + 
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVC 266

Query: 195 PNMFTYTSALKACAGMELKELG-RQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGSMDEAR 252
           P++ T  S   A A     ELG + +HC + +      D I G  +VDMYAK   +D A+
Sbjct: 267 PDVLTLVSLASAVAQCG-DELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQ 325

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY-REGVGFDQTTLSTVLKSVASF 311
            +F  +P++++++WN +I+G++QNG   EA  ++  M+  EG+   Q T  +VL + +  
Sbjct: 326 KVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
             +    ++HALS+KT    D Y+   LID Y KCG + +A+ +F+           ++I
Sbjct: 386 GGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAII 445

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGF 430
                 G G +AL L+ +MQ  EI PD     SLL AC++    +QG+    +    +G 
Sbjct: 446 AGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGI 505

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQ 486
           +        +V+M  + G +D+A      +P +   + W A++G    HG    GK A Q
Sbjct: 506 VPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 565



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 221/476 (46%), Gaps = 39/476 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C    D  L L +H   V  G   + FV N+L+ +Y K G   ++  +F  +  R 
Sbjct: 174 VLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRD 233

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ S       +  AV  F  M+ SG+ P+  +L S+ +A A  GD L  + +H 
Sbjct: 234 LVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHC 293

Query: 121 YSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           Y  + G+D  D+ + NA+VDMYAK+  ++ A  VF ++   D+VSWN +I G + +   +
Sbjct: 294 YVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLAN 353

Query: 180 WALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A++++  M + E + P   T+ S L A + +   + G ++H   IK  +  D  V   L
Sbjct: 354 EAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCL 413

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D+YAKCG + EA  +F  MP ++   WN +I+G   +G   +A SLF  M +E +  D 
Sbjct: 414 IDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDH 473

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T  ++L +         C     +    +F       + +   YG        V I K 
Sbjct: 474 VTFVSLLAA---------CSHAGLVDQGRSF------FDLMQTVYG-------IVPIAKH 511

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                    T M+    + G  +EA +    +Q   I PDS V  +LL AC      E G
Sbjct: 512 Y--------TCMVDMLGRAGQLDEAFEF---IQSMPIKPDSAVWGALLGACRIHGNVEMG 560

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI---VSWSAM 471
           K    ++ +    +  +    + NMYAK G  D  D   S +  + +     WS+M
Sbjct: 561 KVASQNLFELDPENVGYY-VLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 273/740 (36%), Positives = 419/740 (56%), Gaps = 33/740 (4%)

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           +NSL   Y       EA+  F  M+ SGI P++++    ++ACA S     G +IHG  +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K+GY  D+F  N+LV  YA+ G L+ A  VF ++   ++VSW ++I G    +    A+ 
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 184 LFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           LF +M +  E+ PN  T    + ACA +E  E G +++  +    I+ + ++   LVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
            KC ++D A+ +F      NL   N + S +++ G   EA  +F  M   GV  D+ ++ 
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           + + S +  + I   K  H   ++  FES D I N+LID Y KC   + A +IF   S  
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401

Query: 363 DLVACTSMITAYAQFG-------------------------------LGEEALKLYLEMQ 391
            +V   S++  Y + G                               L EEA++++  MQ
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461

Query: 392 DRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
            +E +N D     S+ +AC +L A +  K ++ +I K G   D   G +LV+M+++CG  
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + A   F+ + +R + +W+A IG +A  G  + A+++F  M+E G+ P+ +  V  L AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +H GLV + K  F SM K  G+ P   HY CM+D+LGRAG  +EA++L++ MP + N  +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W +LL A R+  NVE+  +AAE +  + PE++ ++VLLSN+YASAG W+++AKVR  MK+
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             L+K PG S I+++ K + FT GD SH     I A LDEVS   +  G+VP +   L D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V+E EK  +L  HSEKLA+A+GLI++  G TIR+ KNLR+C DCH+  +F SK+ +REII
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821

Query: 751 VRDVNRFHHFRNGSCSCGGY 770
           +RD NRFH+ R G CSCG +
Sbjct: 822 LRDNNRFHYIRQGKCSCGDF 841



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 33/391 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC   +DL  G +V+  +  +G + ++ + ++LV MY KC     ++RLFD     +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +   N++ S YV      EA+  F  M+ SG+RP+  S+ S I++C+   + L G+  HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y ++ G++S     NAL+DMY K    + A  +F  + +  +V+WN+++AG V       
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421

Query: 174 -------LHEHN--DW---------------ALKLFQQMKSSE-INPNMFTYTSALKACA 208
                  + E N   W               A+++F  M+S E +N +  T  S   AC 
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +L + ++  + K  I+ D  +G  LVDM+++CG  + A  IF+ +  +++ AW  
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT- 327
            I      G    A  LF  M  +G+  D       L + +    +   K++    +K  
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
               +D     ++D  G+ G +E+AV++ ++
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/572 (41%), Positives = 365/572 (63%), Gaps = 1/572 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y S + ACA     +  R +H  L   +      +   L+ +Y KCG++ +AR +F  MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +++ +W  +I+G+ QN    EA  L P M R     +  T +++LK+  +  + G+ +Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HAL+VK  +  D Y+ ++L+D Y +CG ++ A+ +F +  + + V+  ++I  +A+ G 
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           GE  L ++ EMQ        F  SS+ +A A + A EQGK VH H+IK G     F GN+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           +++MYAK GS+ DA + F  +  + +V+W++M+   AQ+G G+EA+  F +M + GV  N
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT +S+L AC+H GLV E K +F+ M K++ ++P  +HY  ++D+LGRAG   +A+  +
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFI 425

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             MP +  A+VWGALLG+ R++KN ++GQ AA+ +F ++P+ +   VLL NIYAS G WD
Sbjct: 426 FKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWD 485

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
             A+VR+ MK   +KKEP  SW+E+++ V+ F   D +H RS+EIY K +E+S  + KAG
Sbjct: 486 AAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAG 545

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           YVP  +  L  V+E E++  L +HSEK+A+AF LI  P GATIR+ KN+RIC DCH++F 
Sbjct: 546 YVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFR 605

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +ISK+  REI+VRD NRFHHF +GSCSCG YW
Sbjct: 606 YISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 194/360 (53%), Gaps = 5/360 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   + L     +H  +  + F    F+ NSL+ +Y KCG   D+RR+FD +P R 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SW SL + Y   D  +EA+     M+    +PN F+ +S++ A   S  S +G +IH 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K  +  D++  +AL+DMYA+ G ++ A+AVF  +E  + VSWNA+IAG       + 
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F +M+ +      FTY+S   A AG+   E G+ +H  +IK   +    VG  ++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GSM +AR +F  + +K+++ WN +++   Q G   EA + F  M + GV  +Q T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFES--DDYIVNSLIDAYGKCGHVEDA-VKIFK 357
             ++L + +    +   KQ   +  +   E   D Y+  +++D  G+ G + DA V IFK
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYV--TVVDLLGRAGLLNDALVFIFK 427



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 6/398 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S+I ACA        R IH +     +   +F  N+L+ +Y K G + DA  VF  +   
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           D+ SW ++IAG   ++  D AL L   M      PN FT+ S LKA        +G Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              +K +   D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +I+G  + G   
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
               +F  M R G      T S+V  ++A   A+   K VHA  +K+      ++ N+++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           D Y K G + DA K+F      D+V   SM+TA+AQ+GLG EA+  + EM+   ++ +  
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
              S+L AC++    ++GKQ    + ++    +     ++V++  + G ++DA     ++
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 461 PDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           P +   + W A++G    H   K      GQ   D V 
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAK-----IGQFAADHVF 461



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 140/271 (51%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +     +G Q+H + V   +  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 171 LLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKN 230

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L + +      E  +  F EM  +G     F+ SS+ +A AG G    G+ +H 
Sbjct: 231 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     F  N ++DMYAK G++ DA  VF  ++  D+V+WN+++     +     
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+   ++ N  T+ S L AC+   L + G+Q    + +  ++ +    V +VD
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVD 410

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIA-WNIVI 270
           +  + G +++A +    MP K   A W  ++
Sbjct: 411 LLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           RE+     +  SL+ ACA   + +  + +H H+    F    F  NSL+++Y KCG++ D
Sbjct: 58  RELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVAD 117

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A R F  +P R + SW+++I G AQ+    EAL +   ML     PN  T  S+L A   
Sbjct: 118 ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG- 176

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           A   +       ++  K+         + ++D+  R G+   A+ + D +  + N   W 
Sbjct: 177 ASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK-NGVSWN 235

Query: 573 ALL-GAARIYKNVEVGQHAAEMLFAIEPEKS---STHVLLSNIYAS 614
           AL+ G AR       G     +L   E +++   +TH   S+++++
Sbjct: 236 ALIAGFAR------KGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 273/739 (36%), Positives = 425/739 (57%), Gaps = 8/739 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+++ M  + G    + R+F  +PER V SWN +   Y    FLEEA+  +  M+ +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RP+ ++   ++  C G  D  +GR++H + ++ G+  ++   NALV MYAK G++  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D +SWNA+IAG   +   +  L+LF  M  +E+ PN+ T TS   A +GM 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA-SGM- 310

Query: 212 LKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           L E+G  +++H   +K     D      L+ MY   G M +A  IF  M  K+ ++W  +
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG+ +NG   +A  ++  M    V  D  T+++ L + A    + V  ++H L+    F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                + N+L++ Y K  H++ A+++FK  +  D+V+ +SMI  +       EAL  Y  
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEAL-YYFR 489

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
                + P+S    + L+ACA   A   GK++H ++++ G  S+ +  N+L+++Y KCG 
Sbjct: 490 YMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
              A   FS   ++ +VSW+ M+ G   HG G  AL +F QM+E G  P+ +T V++LCA
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCA 609

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+ AG+V +    F  M +KF I P  +HYACM+D+L R GK  EA  L++ MP + +A+
Sbjct: 610 CSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAA 669

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWGALL   RI+++VE+G+ AA+++  +EP   + HVLL ++Y  AG W  VA+VR+ M+
Sbjct: 670 VWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMR 729

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           +  L+++ G SW+EVK   + F   D SH + KEI   L  + + +   G+ P VE+ L 
Sbjct: 730 EKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP-VES-LE 787

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D E SE + +L  HSE+LAVAFGLI T PG TI V KN   C  CH  F+ IS+IV REI
Sbjct: 788 DKEVSE-DDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREI 846

Query: 750 IVRDVNRFHHFRNGSCSCG 768
            VRD  + H F++G CSCG
Sbjct: 847 TVRDTKQLHCFKDGDCSCG 865



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 273/532 (51%), Gaps = 6/532 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C    D  +G +VH  V+  GF  +  V N+LV MYAKCG+ + +R++FD +    
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ + +      E  +  F  M+ + ++PN  +++S+  A     +    +++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K G+  D+   N+L+ MY  +G + DA  +F  +E  D +SW A+I+G   +   D 
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+++  M+   ++P+  T  SAL ACA +   ++G +LH            +V   L++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +D+A  +F  M EK++++W+ +I+G   N    EA   F +M    V  +  T
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVT 501

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  A+   K++HA  ++    S+ Y+ N+L+D Y KCG    A   F   S
Sbjct: 502 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS 561

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+   M++ +   GLG+ AL L+ +M +   +PD     +LL AC+      QG +
Sbjct: 562 EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWE 621

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           + H+   KF  + +      +V++ ++ G + +A    + +P +   + W A++ G   H
Sbjct: 622 LFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 681

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKK 529
            R  E  ++  +++ + + PN +    +LC     AG  A+     ++M +K
Sbjct: 682 -RHVELGELAAKVILE-LEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 278/707 (39%), Positives = 397/707 (56%), Gaps = 39/707 (5%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIE 158
           S+I+ C+ +      ++IH   ++ G   D FSA+ L+   A     +L+ A  VF  I 
Sbjct: 40  SLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGR 217
           HP++ +WN +I       +   +L +F +M   S   P+ FT+   +KA + +E    G+
Sbjct: 97  HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
             H  +IK+ + SD  +   L+  YAKCG +     +F  +P +++++WN +I+  +Q G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA  LF  M  + V  +  T+  VL + A        + VH+   +        + N
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM--------------------------- 370
           +++D Y KCG VEDA ++F +    D+V+ T+M                           
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336

Query: 371 ----ITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
               I+AY Q G  +EAL+L+ E+Q  +   PD     S L+ACA L A + G  +HV+I
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
            K G   +     SL++MY KCG +  A   F  +  + +  WSAMI GLA HG GK+A+
Sbjct: 397 KKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAI 456

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F +M ED V PN +T  ++LCAC+H GLV E +  F  ME  +G+ P  +HYACM+DI
Sbjct: 457 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 516

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGRAG  +EA+EL++ MP    ASVWGALLGA  I++NV + + A   L  +EP     +
Sbjct: 517 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 576

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLLSNIYA AG WD V+ +R+ M+D  LKKEPG S IEV   V+ F VGD SH  +K+IY
Sbjct: 577 VLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIY 636

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           AKLDE+   L   GYVP     L  VEE + KEQ L+ HSEKLA+AFGLI+T     IR+
Sbjct: 637 AKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRI 696

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH+  + +SK+  REI++RD  RFHHFR G CSC  YW
Sbjct: 697 VKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 253/530 (47%), Gaps = 40/530 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           ++  C+  K L    Q+H  ++ TG   D F A+ L+   A     +   ++++FD IP 
Sbjct: 41  LIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH 97

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            ++ +WN+L   Y       +++  F  M+  S   P++F+   +I A +   +   G+ 
Sbjct: 98  PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            HG  IK+   SD+F  N+L+  YAK G L     VF +I   D+VSWN++I   V    
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGC 217

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + AL+LFQ+M++  + PN  T    L ACA     E GR +H  + +  I     +   
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNA 277

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLI-------------------------------AW 266
           ++DMY KCGS+++A+ +F  MPEK+++                               AW
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAW 337

Query: 267 NIVISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           N +IS + Q G   EA  LF      +    D+ TL + L + A   A+ +   +H    
Sbjct: 338 NALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK 397

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   + + ++  SLID Y KCG ++ A+ +F      D+   ++MI   A  G G++A+ 
Sbjct: 398 KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIA 457

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMY 444
           L+ +MQ+ ++ P++   +++L AC+++   E+G+     + + +G +        +V++ 
Sbjct: 458 LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 517

Query: 445 AKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE 493
            + G +++A     ++P     S W A++G    H     A Q   Q++E
Sbjct: 518 GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIE 567



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 221/488 (45%), Gaps = 76/488 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KA +  ++LF G   HG+V+     SD F+ NSL+  YAKCG      R+F  IP R 
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRD 201

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ + +V     EEA+  F+EM    ++PN  ++  +++ACA   D   GR +H 
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHS 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND- 179
           Y  +      +  +NA++DMY K G++EDA  +F  +   DIVSW  ++ G       D 
Sbjct: 262 YIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDA 321

Query: 180 ---------------W---------------ALKLFQQMKSSEI-NPNMFTYTSALKACA 208
                          W               AL+LF +++ S+   P+  T  S L ACA
Sbjct: 322 AQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACA 381

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +LG  +H  + K  +K +  +   L+DMY KCG + +A M+FH +  K++  W+ 
Sbjct: 382 QLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSA 441

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I+G   +G   +A +LF  M  + V  +  T + +L           C   H   V   
Sbjct: 442 MIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNIL-----------CACSHVGLV--- 487

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            E      N +   YG    V   VK +         AC  M+    + GL EEA++L  
Sbjct: 488 -EEGRTFFNQMELVYG----VLPGVKHY---------AC--MVDILGRAGLLEEAVELIE 531

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-----LVNM 443
           +M    + P + V  +LL AC         +Q    +I+         GN      L N+
Sbjct: 532 KM---PMAPAASVWGALLGACTIHENVVLAEQACSQLIELE------PGNHGAYVLLSNI 582

Query: 444 YAKCGSID 451
           YAK G  D
Sbjct: 583 YAKAGKWD 590


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 289/802 (36%), Positives = 454/802 (56%), Gaps = 43/802 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +K+  + +D      +H   +  G        VAN+L+  YA+CG    +  +F +I + 
Sbjct: 66  IKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDS 125

Query: 60  S--VVSWNSLFSCYVHCDFLEEAVCFFKE---------MVLSGIRP-NEFSLSSMINAC- 106
           +   VS+NSL S          A+C F+           +L+G  P   F+L S++ A  
Sbjct: 126 AHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVS 175

Query: 107 ---AGSGDSLLGRKIHGYSIKLG--YDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--H 159
              A +    LGR+ H +++K G  +    F+ NAL+ MYA++G + DA  +F       
Sbjct: 176 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 235

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+V+WN +++  V     D A++    M +  + P+  T+ SAL AC+ +EL ++GR++
Sbjct: 236 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 295

Query: 220 HCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE--KNLIAWNIVISGHLQN 276
           H  +IK  E+ ++  V   LVDMYA    + +AR +F ++P+  K L  WN +I G+ Q 
Sbjct: 296 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 355

Query: 277 GGDMEAASLFPWMYREGVGFD--QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           G D EA  LF  M  E  GF   +TT+++VL + A  +A    + VH   VK     + +
Sbjct: 356 GMDEEALRLFARMEAEA-GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF 414

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+L+D Y + G  + A +IF      D+V+  ++IT     G   +A +L  EMQ  E
Sbjct: 415 VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 474

Query: 395 ---INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              + P++    +LL  CA L+A  +GK++H + ++    +D   G++LV+MYAKCG + 
Sbjct: 475 EGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLA 534

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCAC 510
            +   F  +P R  ++W+ +I     HG G EA  +F +M   G   PN +T ++ L AC
Sbjct: 535 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 594

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF-QANAS 569
           +H+G+V      F +ME+  G++P  +  AC++DILGRAG+  EA  +V +M   +   S
Sbjct: 595 SHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVS 654

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
            W  +LGA R+++NV +G+ A E L  +EPE++S +VLL NIY++AG W   A+VR  M+
Sbjct: 655 AWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMR 714

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              + KEPG SWIEV   ++ F  G+ +H  S+E++A ++ +   +   GY P     LH
Sbjct: 715 RRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLH 774

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D+++ +K  +L  HSEKLA+AFGL+   PGATIRV KNLR+C DCH + +F+SK+V REI
Sbjct: 775 DMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREI 834

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           ++RDV RFHHFRNG CSCG YW
Sbjct: 835 VLRDVRRFHHFRNGQCSCGDYW 856



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 147/278 (52%), Gaps = 9/278 (3%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC ++ + F G + VHG VV  G   + FV N+L+ MYA+ G    +RR+F  +   
Sbjct: 384 VLPAC-ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 442

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL---SGIRPNEFSLSSMINACAGSGDSLLGR 116
            VVSWN+L +  V    + +A    +EM      G+ PN  +L +++  CA       G+
Sbjct: 443 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 502

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IHGY+++   D+D+   +ALVDMYAK G L  + AVF  +   + ++WN +I    +H 
Sbjct: 503 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 562

Query: 177 HNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQL-HCSLIKMEIKSDPIV 234
               A  LF +M +S E  PN  T+ +AL AC+   + + G QL H       ++  P +
Sbjct: 563 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 622

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVI 270
              +VD+  + G +DEA  +   M   E+ + AW+ ++
Sbjct: 623 LACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML 660



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 48/394 (12%)

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI--KSDPIVGVGLVDMYA 243
           QQ+  S + P       A+K+ A +      R +H + ++  +  +  P V   L+  YA
Sbjct: 55  QQLDHSALPP-------AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYA 107

Query: 244 KCGSMDEARMIFHLMPEK--NLIAWNIVISGHLQNGGDMEAASLF-PWMYRE-------- 292
           +CG +  A  +F  + +   + +++N +IS          A  LF  W +          
Sbjct: 108 RCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLA 157

Query: 293 -GVGFDQTTLSTVLKSV----ASFQAIGVCKQVHALSVKTAF--ESDDYIVNSLIDAYGK 345
            G      TL +VL++V    A+  A+ + ++ HA ++K         +  N+L+  Y +
Sbjct: 158 GGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 217

Query: 346 CGHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            G V DA ++F  ++    D+V   +M++   Q G+ +EA++   +M    + PD    +
Sbjct: 218 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 277

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S L AC+ L   + G+++H ++IK     +++F  ++LV+MYA    +  A + F  +PD
Sbjct: 278 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 337

Query: 463 RG--IVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVA-- 517
            G  +  W+AMI G AQ G  +EAL++F +M  E G +P   T+ SVL AC  +   A  
Sbjct: 338 SGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 397

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           EA H +       G + +Q     ++D+  R GK
Sbjct: 398 EAVHGYVVKRGMAGNRFVQN---ALMDMYARLGK 428


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 289/802 (36%), Positives = 454/802 (56%), Gaps = 43/802 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +K+  + +D      +H   +  G        VAN+L+  YA+CG    +  +F +I + 
Sbjct: 64  IKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDS 123

Query: 60  S--VVSWNSLFSCYVHCDFLEEAVCFFKE---------MVLSGIRP-NEFSLSSMINAC- 106
           +   VS+NSL S          A+C F+           +L+G  P   F+L S++ A  
Sbjct: 124 AHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVS 173

Query: 107 ---AGSGDSLLGRKIHGYSIKLG--YDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--H 159
              A +    LGR+ H +++K G  +    F+ NAL+ MYA++G + DA  +F       
Sbjct: 174 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 233

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+V+WN +++  V     D A++    M +  + P+  T+ SAL AC+ +EL ++GR++
Sbjct: 234 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 293

Query: 220 HCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE--KNLIAWNIVISGHLQN 276
           H  +IK  E+ ++  V   LVDMYA    + +AR +F ++P+  K L  WN +I G+ Q 
Sbjct: 294 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 353

Query: 277 GGDMEAASLFPWMYREGVGFD--QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           G D EA  LF  M  E  GF   +TT+++VL + A  +A    + VH   VK     + +
Sbjct: 354 GMDEEALRLFARMEAEA-GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF 412

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+L+D Y + G  + A +IF      D+V+  ++IT     G   +A +L  EMQ  E
Sbjct: 413 VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 472

Query: 395 ---INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              + P++    +LL  CA L+A  +GK++H + ++    +D   G++LV+MYAKCG + 
Sbjct: 473 EGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLA 532

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCAC 510
            +   F  +P R  ++W+ +I     HG G EA  +F +M   G   PN +T ++ L AC
Sbjct: 533 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 592

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF-QANAS 569
           +H+G+V      F +ME+  G++P  +  AC++DILGRAG+  EA  +V +M   +   S
Sbjct: 593 SHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVS 652

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
            W  +LGA R+++NV +G+ A E L  +EPE++S +VLL NIY++AG W   A+VR  M+
Sbjct: 653 AWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMR 712

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              + KEPG SWIEV   ++ F  G+ +H  S+E++A ++ +   +   GY P     LH
Sbjct: 713 RRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLH 772

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D+++ +K  +L  HSEKLA+AFGL+   PGATIRV KNLR+C DCH + +F+SK+V REI
Sbjct: 773 DMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREI 832

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           ++RDV RFHHFRNG CSCG YW
Sbjct: 833 VLRDVRRFHHFRNGQCSCGDYW 854



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 147/278 (52%), Gaps = 9/278 (3%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC ++ + F G + VHG VV  G   + FV N+L+ MYA+ G    +RR+F  +   
Sbjct: 382 VLPAC-ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 440

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL---SGIRPNEFSLSSMINACAGSGDSLLGR 116
            VVSWN+L +  V    + +A    +EM      G+ PN  +L +++  CA       G+
Sbjct: 441 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 500

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IHGY+++   D+D+   +ALVDMYAK G L  + AVF  +   + ++WN +I    +H 
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 560

Query: 177 HNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQL-HCSLIKMEIKSDPIV 234
               A  LF +M +S E  PN  T+ +AL AC+   + + G QL H       ++  P +
Sbjct: 561 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 620

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVI 270
              +VD+  + G +DEA  +   M   E+ + AW+ ++
Sbjct: 621 LACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML 658



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 48/394 (12%)

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI--KSDPIVGVGLVDMYA 243
           QQ+  S + P       A+K+ A +      R +H + ++  +  +  P V   L+  YA
Sbjct: 53  QQLDHSALPP-------AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYA 105

Query: 244 KCGSMDEARMIFHLMPEK--NLIAWNIVISGHLQNGGDMEAASLF-PWMYRE-------- 292
           +CG +  A  +F  + +   + +++N +IS          A  LF  W +          
Sbjct: 106 RCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLA 155

Query: 293 -GVGFDQTTLSTVLKSV----ASFQAIGVCKQVHALSVKTAF--ESDDYIVNSLIDAYGK 345
            G      TL +VL++V    A+  A+ + ++ HA ++K         +  N+L+  Y +
Sbjct: 156 GGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 215

Query: 346 CGHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            G V DA ++F  ++    D+V   +M++   Q G+ +EA++   +M    + PD    +
Sbjct: 216 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 275

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S L AC+ L   + G+++H ++IK     +++F  ++LV+MYA    +  A + F  +PD
Sbjct: 276 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335

Query: 463 RG--IVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVA-- 517
            G  +  W+AMI G AQ G  +EAL++F +M  E G +P   T+ SVL AC  +   A  
Sbjct: 336 SGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 395

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           EA H +       G + +Q     ++D+  R GK
Sbjct: 396 EAVHGYVVKRGMAGNRFVQN---ALMDMYARLGK 426


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 289/802 (36%), Positives = 454/802 (56%), Gaps = 43/802 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +K+  + +D      +H   +  G        VAN+L+  YA+CG    +  +F +I + 
Sbjct: 64  IKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDS 123

Query: 60  S--VVSWNSLFSCYVHCDFLEEAVCFFKE---------MVLSGIRP-NEFSLSSMINAC- 106
           +   VS+NSL S          A+C F+           +L+G  P   F+L S++ A  
Sbjct: 124 AHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVS 173

Query: 107 ---AGSGDSLLGRKIHGYSIKLG--YDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--H 159
              A +    LGR+ H +++K G  +    F+ NAL+ MYA++G + DA  +F       
Sbjct: 174 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 233

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+V+WN +++  V     D A++    M +  + P+  T+ SAL AC+ +EL ++GR++
Sbjct: 234 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 293

Query: 220 HCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE--KNLIAWNIVISGHLQN 276
           H  +IK  E+ ++  V   LVDMYA    + +AR +F ++P+  K L  WN +I G+ Q 
Sbjct: 294 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 353

Query: 277 GGDMEAASLFPWMYREGVGFD--QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           G D EA  LF  M  E  GF   +TT+++VL + A  +A    + VH   VK     + +
Sbjct: 354 GMDEEALRLFARMEAEA-GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF 412

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+L+D Y + G  + A +IF      D+V+  ++IT     G   +A +L  EMQ  E
Sbjct: 413 VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 472

Query: 395 ---INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              + P++    +LL  CA L+A  +GK++H + ++    +D   G++LV+MYAKCG + 
Sbjct: 473 EGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLA 532

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCAC 510
            +   F  +P R  ++W+ +I     HG G EA  +F +M   G   PN +T ++ L AC
Sbjct: 533 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 592

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF-QANAS 569
           +H+G+V      F +ME+  G++P  +  AC++DILGRAG+  EA  +V +M   +   S
Sbjct: 593 SHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVS 652

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
            W  +LGA R+++NV +G+ A E L  +EPE++S +VLL NIY++AG W   A+VR  M+
Sbjct: 653 AWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMR 712

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              + KEPG SWIEV   ++ F  G+ +H  S+E++A ++ +   +   GY P     LH
Sbjct: 713 RRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLH 772

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D+++ +K  +L  HSEKLA+AFGL+   PGATIRV KNLR+C DCH + +F+SK+V REI
Sbjct: 773 DMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREI 832

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           ++RDV RFHHFRNG CSCG YW
Sbjct: 833 VLRDVRRFHHFRNGQCSCGDYW 854



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 147/278 (52%), Gaps = 9/278 (3%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC ++ + F G + VHG VV  G   + FV N+L+ MYA+ G    +RR+F  +   
Sbjct: 382 VLPAC-ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 440

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL---SGIRPNEFSLSSMINACAGSGDSLLGR 116
            VVSWN+L +  V    + +A    +EM      G+ PN  +L +++  CA       G+
Sbjct: 441 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 500

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IHGY+++   D+D+   +ALVDMYAK G L  + AVF  +   + ++WN +I    +H 
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 560

Query: 177 HNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQL-HCSLIKMEIKSDPIV 234
               A  LF +M +S E  PN  T+ +AL AC+   + + G QL H       ++  P +
Sbjct: 561 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 620

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVI 270
              +VD+  + G +DEA  +   M   E+ + AW+ ++
Sbjct: 621 LACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 658



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 48/394 (12%)

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI--KSDPIVGVGLVDMYA 243
           QQ+  S + P       A+K+ A +      R +H + ++  +  +  P V   L+  YA
Sbjct: 53  QQLDHSALPP-------AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYA 105

Query: 244 KCGSMDEARMIFHLMPEK--NLIAWNIVISGHLQNGGDMEAASLF-PWMYRE-------- 292
           +CG +  A  +F  + +   + +++N +IS          A  LF  W +          
Sbjct: 106 RCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLA 155

Query: 293 -GVGFDQTTLSTVLKSV----ASFQAIGVCKQVHALSVKTAF--ESDDYIVNSLIDAYGK 345
            G      TL +VL++V    A+  A+ + ++ HA ++K         +  N+L+  Y +
Sbjct: 156 GGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 215

Query: 346 CGHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            G V DA ++F  ++    D+V   +M++   Q G+ +EA++   +M    + PD    +
Sbjct: 216 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 275

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S L AC+ L   + G+++H ++IK     +++F  ++LV+MYA    +  A + F  +PD
Sbjct: 276 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335

Query: 463 RG--IVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVA-- 517
            G  +  W+AMI G AQ G  +EAL++F +M  E G +P   T+ SVL AC  +   A  
Sbjct: 336 SGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 395

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           EA H +       G + +Q     ++D+  R GK
Sbjct: 396 EAVHGYVVKRGMAGNRFVQN---ALMDMYARLGK 426


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/781 (33%), Positives = 437/781 (55%), Gaps = 11/781 (1%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGF---------DSDEFVANSLVVMYAKCGNFIDSRR 51
            VL AC       +G  VHG  + +G            DE + + LV MY KCG+   +RR
Sbjct: 305  VLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARR 364

Query: 52   LFDAIPERSVVS-WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
            +FDA+P +  V  WN +   Y      EE++  F++M   GI P+E +LS ++       
Sbjct: 365  VFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLS 424

Query: 111  DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
             +  G   HGY +KLG+ +     NAL+  YAK   +++AV VF  + H D +SWN+VI+
Sbjct: 425  CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVIS 484

Query: 171  GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
            GC  +  N  A++LF +M       +  T  S L ACA      +GR +H   +K  +  
Sbjct: 485  GCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIG 544

Query: 231  DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
            +  +   L+DMY+ C        IF  M +KN+++W  +I+ + + G   + A L   M 
Sbjct: 545  ETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMV 604

Query: 291  REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
             +G+  D   +++VL   A  +++   K VH  +++   E    + N+L++ Y  C ++E
Sbjct: 605  LDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNME 664

Query: 351  DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            +A  +F   +  D+++  ++I  Y++     E+  L+ +M   +  P++   + +L A A
Sbjct: 665  EARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVA 723

Query: 411  NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
            ++S+ E+G+++H + ++ GF+ D++  N+LV+MY KCG++  A   F  +  + ++SW+ 
Sbjct: 724  SISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTI 783

Query: 471  MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
            MI G   HG GK+A+ +F QM   GV P+  +  ++L AC H+GL AE    F +M K++
Sbjct: 784  MIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEY 843

Query: 531  GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
             I+P  +HY C++D+L   G  +EA E +++MP + ++S+W +LL   RI+++V++ +  
Sbjct: 844  KIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKV 903

Query: 591  AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
            A+ +F +EPE +  +VLL+NIYA A  W+ V K++  +    L++  G SWIEV+ KV+ 
Sbjct: 904  ADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHV 963

Query: 651  FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
            F   +R+H     I   LD V+  + + G+ P  +  L    ++  ++ L  HS KLAV 
Sbjct: 964  FIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVT 1023

Query: 711  FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
            FG++  P G  IRV KN ++C  CH + +FISK+ +REII+RD +RFHHF  G CSC G+
Sbjct: 1024 FGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSCRGH 1083

Query: 771  W 771
            +
Sbjct: 1084 F 1084



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 255/520 (49%), Gaps = 13/520 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIV-VFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V++ C  ++ L    + H +V   TG      +   LV+ Y KCG+   +R +FD +P R
Sbjct: 100 VVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPR 159

Query: 60  --SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
              V  W SL S Y      +E V  F++M   G+ P+  ++S ++   A  G    G  
Sbjct: 160 VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEV 219

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IHG   KLG       ANAL+ +Y++ G +EDA+ VF  +   D +SWN+ I+G   +  
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK---------MEI 228
           +D A+ LF +M S     +  T  S L ACA +  + +G+ +H   +K         ++ 
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAASLFP 287
             D  +G  LV MY KCG M  AR +F  MP K N+  WN+++ G+ +     E+  LF 
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M+  G+  D+  LS +LK +            H   VK  F +   + N+LI  Y K  
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            +++AV +F      D ++  S+I+     GL  EA++L++ M  +    DS    S+L 
Sbjct: 460 MIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           ACA    +  G+ VH + +K G + +T   N+L++MY+ C      ++ F  +  + +VS
Sbjct: 520 ACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS 579

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           W+AMI    + G   +   +  +M+ DG+ P+   + SVL
Sbjct: 580 WTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVL 619



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 20/289 (6%)

Query: 339 LIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           L+ AY KCG +  A  +F E      D+   TS+++AYA+ G  +E + L+ +MQ   ++
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD+   S +L   A+L +  +G+ +H  + K G        N+L+ +Y++CG ++DA + 
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG-- 514
           F  +  R  +SW++ I G   +G    A+ +F +M  +G   + +T++SVL AC   G  
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILG--------RAGKFQEAMELVDTMPFQA 566
           LV +  H + SM+    +  ++   + + + LG        + G    A  + D MP + 
Sbjct: 316 LVGKVVHGY-SMKSGL-LWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKG 373

Query: 567 NASVWGALLG----AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
           N  VW  ++G    AA   +++ + +   E+   I P++ +   LL  I
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHEL--GITPDEHALSCLLKCI 420


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 253/629 (40%), Positives = 376/629 (59%), Gaps = 4/629 (0%)

Query: 147 LEDAVAVFKDIEHPDIVS--WNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTS 202
           L  AV++F+    P + +  +N ++   +   H + AL LF +M   +S    +  T   
Sbjct: 66  LPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAAC 125

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           ALK+C+ M   ++GR +    +K  + +D  V   L+ MYA CG +  AR++F    E  
Sbjct: 126 ALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESG 185

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           ++ WN +++ +L+NG  ME   +F  M   GV FD+ TL +V+ +        + K V  
Sbjct: 186 VVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAG 245

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
              +     +  +V +L+D Y KCG +  A ++F    + D+VA ++MI+ Y Q     E
Sbjct: 246 HVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCRE 305

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL L+ EMQ   + P+     S+L+ACA L A E GK VH ++ +      T  G +LV+
Sbjct: 306 ALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVD 365

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
            YAKCG IDDA  AF  +P +   +W+A+I G+A +GRG+EAL++F  M E G+ P  +T
Sbjct: 366 FYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVT 425

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            + VL AC+H+ LV E + HF+SM + +GI+P  EHY CM+D+LGRAG   EA + + TM
Sbjct: 426 FIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTM 485

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           P + NA +W ALL +  +++NV +G+ A + + ++ P  S  +VLLSNIYASAG W + A
Sbjct: 486 PIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAA 545

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            VR+ MKD  ++K PG S IE+   V+ F   D  H   +EIY K++E+   +  AGYVP
Sbjct: 546 MVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVP 605

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
                  +VEE EKE  + HHSEKLA+AFGL+   PGATIR+ KNLR+C DCH++ + IS
Sbjct: 606 NTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLIS 665

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K+  REI+VRD N FHHF++G+CSC  YW
Sbjct: 666 KVYDREIVVRDRNIFHHFKDGTCSCNDYW 694



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 222/471 (47%), Gaps = 48/471 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK+C+    L +G  V    V  G  +D FV +SL+ MYA CG+   +R +FDA  E  V
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGV 186

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V WN++ + Y+      E V  FK M+  G+  +E +L S++ AC   GD+ LG+ + G+
Sbjct: 187 VMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH 246

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             + G   +     AL+DMYAK G +  A  +F  ++  D+V+W+A+I+G    +    A
Sbjct: 247 VDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 306

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF +M+ + + PN  T  S L ACA +   E G+ +H  + +  +    I+G  LVD 
Sbjct: 307 LGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDF 366

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCG +D+A   F  MP KN   W  +I G   NG   EA  LF  M   G+     T 
Sbjct: 367 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTF 426

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTA---FES--DDYIVNSLIDAYGKCGHVEDAVKIF 356
             VL + +           H+  V+     F+S   DY +   ++ YG            
Sbjct: 427 IGVLMACS-----------HSCLVEEGRRHFDSMARDYGIKPRVEHYG------------ 463

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                        M+    + GL +EA +    M    I P++ +  +LL++CA      
Sbjct: 464 ------------CMVDLLGRAGLVDEAYQFIRTMP---IEPNAVIWRALLSSCAVHRNVG 508

Query: 417 QGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
            G++    II    ++ + +G+   L N+YA  G   DA     E+ DRGI
Sbjct: 509 IGEEALKQIIS---LNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGI 556



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 218/439 (49%), Gaps = 11/439 (2%)

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDSLL 114
           P  S   +N L   ++H    E+A+  F EM+   S    ++ + +  + +C+      +
Sbjct: 79  PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           GR +  Y++K G  +D F  ++L+ MYA  G++  A  VF   E   +V WNA++A  + 
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYL- 197

Query: 175 HEHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            ++ DW   +++F+ M    +  +  T  S + AC  +   +LG+ +   + +  +  +P
Sbjct: 198 -KNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNP 256

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +   L+DMYAKCG + +AR +F  M  ++++AW+ +ISG+ Q     EA  LF  M   
Sbjct: 257 KLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLA 316

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  +  T+ +VL + A   A+   K VH+   +        +  +L+D Y KCG ++DA
Sbjct: 317 RVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDA 376

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           V+ F+     +    T++I   A  G G EAL+L+  M++  I P       +L AC++ 
Sbjct: 377 VEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436

Query: 413 SAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              E+G++    + + +G          +V++  + G +D+A +    +P +   V W A
Sbjct: 437 CLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRA 496

Query: 471 MIGGLAQH---GRGKEALQ 486
           ++   A H   G G+EAL+
Sbjct: 497 LLSSCAVHRNVGIGEEALK 515



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 137/273 (50%), Gaps = 2/273 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC    D  LG  V G V   G   +  +  +L+ MYAKCG    +RRLFD +  R 
Sbjct: 227 VVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRD 286

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+++ S Y   D   EA+  F EM L+ + PN+ ++ S+++ACA  G    G+ +H 
Sbjct: 287 VVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHS 346

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +           ALVD YAK G ++DAV  F+ +   +  +W A+I G   +     
Sbjct: 347 YVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGRE 406

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LV 239
           AL+LF  M+ + I P   T+   L AC+   L E GR+   S+ +       +   G +V
Sbjct: 407 ALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMV 466

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
           D+  + G +DEA      MP E N + W  ++S
Sbjct: 467 DLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/766 (36%), Positives = 418/766 (54%), Gaps = 88/766 (11%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+ SG +P    L+ ++     S + +  R++     +   + D  +   L+  Y  +GN
Sbjct: 39  MIASGFKPRGHFLNRLLEMYCKSSNLVYARQL----FEEIPNPDAIARTTLITAYCALGN 94

Query: 147 LEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           LE    +F    +   D V +NA+I G   +     AL+LF+ M+  +  P+ FT+TS L
Sbjct: 95  LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154

Query: 205 KACA---GMELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAK--------CGSMDEA 251
            A     G E ++ G Q+HC+++K  M   S  ++   L+ +Y K        C +M  A
Sbjct: 155 SALVLFVGNE-QQCG-QMHCAVVKTGMGCVSSSVLN-ALLSVYVKRASELGISCSAMVSA 211

Query: 252 RMIFHLMPEKNLI-------------------------------AWNIVISGHLQNGGDM 280
           R +F  MP+++ +                               AWN +ISG++  G   
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQ 271

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV---- 336
           EA +L   M   G+ FD  T +T++ + A+  +  + KQVHA  +K     +        
Sbjct: 272 EALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVS 331

Query: 337 -------------------------------NSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
                                          N+++  Y   G +E+A   F+E    +L+
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
             T MI+  AQ G G+E LKL+ +M+     P  F  +  L AC+ L A E G+Q+H  +
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL 451

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +  G+ S    GN++++MYAKCG ++ A+  F  +P   +VSW++MI  L QHG G +A+
Sbjct: 452 VHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAI 511

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           ++F QML++GV P+ IT ++VL AC+HAGLV + +H+F SM + +GI P ++HYA M+D+
Sbjct: 512 ELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDL 571

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
             RAG F  A  ++D+MP +  A VW ALL   RI+ N+++G  AAE LF + P+   T+
Sbjct: 572 FCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTY 631

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLLSNIYA  G W+ VAKVR+ M+D  ++KEP  SWIEV++KV+ F V D  H     +Y
Sbjct: 632 VLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVY 691

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
             L+++   + K GY+P  +  LHD+E  +KE  L  HSEKLAV FG++  PPGAT+RV 
Sbjct: 692 RYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVF 751

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KN+RIC DCH +F+F+SK+  REIIVRD  RFHHF+NG CSC  YW
Sbjct: 752 KNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 258/599 (43%), Gaps = 119/599 (19%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-------------- 58
           L   VH  ++ +GF       N L+ MY K  N + +R+LF+ IP               
Sbjct: 31  LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 59  -------------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
                              R  V +N++ + Y H      A+  F+ M     RP++F+ 
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150

Query: 100 SSMINA---------------CA----GSG---DSLLGRKIHGY---SIKLGYD-SDMFS 133
           +S+++A               CA    G G    S+L   +  Y   + +LG   S M S
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVS 210

Query: 134 ANALVDM---------------YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           A  L D                Y +  +L  A  VF+ +      +WNA+I+G V     
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI----V 234
             AL L ++M+   I  +  TYT+ + ACA +   ++G+Q+H  ++K E+  +      V
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSV 330

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM----- 289
              L+ +Y K   +DEAR IF+ MP +N+I WN ++SG++  G   EA S F  M     
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390

Query: 290 ----------YREGVG------FDQTTL----------STVLKSVASFQAIGVCKQVHAL 323
                      + G G      F Q  L          +  L + +   A+   +Q+HA 
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            V   +ES   + N++I  Y KCG VE A  +F    +VDLV+  SMI A  Q G G +A
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKA 510

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMS--DTFAGNSL 440
           ++L+ +M    + PD     ++L AC++    E+G+     +++ +G     D +A   +
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYA--RM 568

Query: 441 VNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGR---GKEAL-QMFGQMLED 494
           V+++ + G    A      +P + G   W A++ G   HG    G EA  Q+F  M ++
Sbjct: 569 VDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN 627



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 151/309 (48%), Gaps = 37/309 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF----VANSLVVMYAKCGNFIDSRRLFDAI 56
           ++ AC +     +G QVH  ++    + +      V+N+L+ +Y K     ++R++F A+
Sbjct: 295 IISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFF-------------------------------K 85
           P R++++WN++ S YV+   +EEA  FF                               K
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFK 414

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M L G  P +F+ +  + AC+  G    GR++H   + LGY+S +   NA++ MYAK G
Sbjct: 415 QMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCG 474

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +E A +VF  +   D+VSWN++IA    H H   A++LF QM    + P+  T+ + L 
Sbjct: 475 VVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534

Query: 206 ACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NL 263
           AC+   L E GR    S+++   I         +VD++ + G    AR++   MP K   
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGA 594

Query: 264 IAWNIVISG 272
             W  +++G
Sbjct: 595 PVWEALLAG 603



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 50/285 (17%)

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +  + + VHA  + + F+   + +N L++ Y K  ++  A ++F+E    D +A T++IT
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLIT 87

Query: 373 AYAQFG---LGEE------------------------------ALKLYLEMQDREINPDS 399
           AY   G   LG E                              AL+L+  M+  +  PD 
Sbjct: 88  AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147

Query: 400 FVCSSLLNACANLSAYEQG-KQVHVHIIKFGF-MSDTFAGNSLVNMYAK--------CGS 449
           F  +S+L+A       EQ   Q+H  ++K G     +   N+L+++Y K        C +
Sbjct: 148 FTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSA 207

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED-GVLPNHITLVSVLC 508
           +  A + F E+P R  ++W+ MI G  ++     A ++F  M+E+ G   N +    V C
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            C    L    K  F       GIQ     Y  +I      G FQ
Sbjct: 268 GCFQEALTLCRKMRF------LGIQFDDITYTTIISACANVGSFQ 306



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+    L  G Q+H  +V  G++S   V N+++ MYAKCG    +  +F  +P   +
Sbjct: 432 LTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDL 491

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK---- 117
           VSWNS+ +         +A+  F +M+  G+ P+  +  +++ AC+ +G    GR     
Sbjct: 492 VSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNS 551

Query: 118 -IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLH 175
            +  Y I    D        +VD++ + G    A  V   +   P    W A++AGC +H
Sbjct: 552 MLESYGITPCED----HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIH 607

Query: 176 EHNDWALKLFQQM 188
            + D  ++  +Q+
Sbjct: 608 GNMDLGIEAAEQL 620


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/657 (39%), Positives = 396/657 (60%), Gaps = 3/657 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC     +  G ++HG+V   GFDSD FV N+L++ Y  CG   D +R+FD + ER 
Sbjct: 13  VLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERD 72

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSWNS+   +    F  EA+  F EM L SG RPN  S+ S++  CAG  D + GR+IH
Sbjct: 73  VVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIH 132

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            Y +K G DS +   NALVD+Y K G ++D+  VF +I   + VSWNA+I      E N 
Sbjct: 133 CYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQ 192

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL++F+ M    + PN  T++S L     ++L + G+++H   ++  ++SD  V   L+
Sbjct: 193 DALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALI 252

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G   +A  +F+ + EKN+++WN +++   QN  ++ A  L   M  +G   +  
Sbjct: 253 DMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSV 312

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T + VL + A    +   K++HA +++T    D ++ N+L D Y KCG +  A ++FK  
Sbjct: 313 TFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-I 371

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S  D V+   +I  Y+Q     E+L+L+LEM  + +  D      +++ACANL+A +QGK
Sbjct: 372 SLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGK 431

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH   ++    +  F  N+L++ Y KCG ID A + F +IP R   SW++MI G    G
Sbjct: 432 EVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLG 491

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
               A+ +F  M EDGV  + ++ ++VL AC+H GLV E K +FE M+ +  I+P Q HY
Sbjct: 492 ELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHY 550

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+LGRAG  +EA++L++++P + +A+VWGALLGA RI+  +E+   AAE LF ++P
Sbjct: 551 ACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKP 610

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           + S  + +LSN+YA AG WD   +VR+ MK    KK PG SW+++ ++V+ F  G+R
Sbjct: 611 QHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/488 (32%), Positives = 259/488 (53%), Gaps = 8/488 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+R ++ +   ++ ACA S     GR+IHG   KLG+DSD+F  N L+  Y   G L+D 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAG 209
             VF ++   D+VSWN+VI    +H     A+ LF +M   S   PNM +  S L  CAG
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +E    GRQ+HC ++K  + S   VG  LVD+Y KCG + ++R +F  + E+N ++WN +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+       + +A  +F  M   GV  +  T S++L  +   +     K++H  S++   
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           ESD ++ N+LID Y K G    A  +F +    ++V+  +M+  +AQ  L   A+ L  +
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301

Query: 390 MQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           MQ D EI P+S   +++L ACA +     GK++H   I+ G   D F  N+L +MYAKCG
Sbjct: 302 MQADGEI-PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ++ A R F +I  R  VS++ +I G +Q     E+L++F +M   G+  + ++ + V+ 
Sbjct: 361 CLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVIS 419

Query: 509 AC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
           AC N A L    + H  ++ K         +   ++D   + G+   A ++   +P +  
Sbjct: 420 ACANLAALKQGKEVHGLAVRKHLHTHLFIAN--ALLDFYIKCGRIDLAGKVFRQIPSRDT 477

Query: 568 ASVWGALL 575
           AS W +++
Sbjct: 478 AS-WNSMI 484


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 274/734 (37%), Positives = 405/734 (55%), Gaps = 78/734 (10%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAG 171
           L R +   +     D    SA +LV  YA    L  AV+ F  +     D V  NAVI+ 
Sbjct: 71  LSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISA 130

Query: 172 CVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELG----RQLHCSLIKM 226
                H   A+ +F+ +  S  + P+ +++T+ L A  G  L  +      QLHCS++K 
Sbjct: 131 YARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSA--GGHLPNISVRHCAQLHCSVLKS 188

Query: 227 EIKSDPIVGVGLVDMYAKCGSMD---EARMIFHLMPEKNL-------------------- 263
                  V   LV +Y KC S +   +AR +   MP K+                     
Sbjct: 189 GAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAAR 248

Query: 264 -----------IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
                      + WN +ISG++ +G  +EA  LF  M  E V  D+ T ++VL + A+  
Sbjct: 249 SVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVG 308

Query: 313 AIGVCKQVHA--LSVKTAF--ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
                K VH   + ++  F  E+   + N+L+  Y KCG++  A +IF   +  D+V+  
Sbjct: 309 LFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWN 368

Query: 369 S-------------------------------MITAYAQFGLGEEALKLYLEMQDREINP 397
           +                               M++ Y   G  E+ALKL+ +M+   + P
Sbjct: 369 TILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKP 428

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
             +  +  + AC  L A + GKQ+H HI++ GF     AGN+L+ MYA+CG++ +A   F
Sbjct: 429 CDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMF 488

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
             +P+   VSW+AMI  L QHG G+EAL++F +M+ +G+ P+ I+ ++VL ACNH+GLV 
Sbjct: 489 LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVD 548

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E   +FESM++ FGI P ++HY  +ID+LGRAG+  EA +L+ TMPF+   S+W A+L  
Sbjct: 549 EGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R   ++E+G HAA+ LF + P+   T++LLSN Y++AG W + A+VR+ M+D  +KKEP
Sbjct: 609 CRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEP 668

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G SWIE  +KV+ F VGD  H  + E+Y  L+ V   + K GYVP  +  LHD+E  +KE
Sbjct: 669 GCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKE 728

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            +L+ HSE+LAV FGL+  PPGAT+ V KNLRIC DCH +  F+SK V REI+VRDV RF
Sbjct: 729 HILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRF 788

Query: 758 HHFRNGSCSCGGYW 771
           HHF++G CSCG YW
Sbjct: 789 HHFKDGECSCGNYW 802



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 35/316 (11%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + D+    ++VV Y + G+   +R +F+ +  +  V WN++ S YVH     EA   F+ 
Sbjct: 225 NKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRR 284

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG----YDSDMFSANALVDMYA 142
           MVL  +  +EF+ +S+++ACA  G    G+ +HG  I+L      ++ +   NALV  Y+
Sbjct: 285 MVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYS 344

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND----------------W------ 180
           K GN+  A  +F ++   D+VSWN +++G V     D                W      
Sbjct: 345 KCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSG 404

Query: 181 ---------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    ALKLF +M+S  + P  +TY  A+ AC  +   + G+QLH  ++++  +  
Sbjct: 405 YVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGS 464

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              G  L+ MYA+CG++ EA ++F +MP  + ++WN +IS   Q+G   EA  LF  M  
Sbjct: 465 NSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524

Query: 292 EGVGFDQTTLSTVLKS 307
           EG+  D+ +  TVL +
Sbjct: 525 EGIYPDRISFLTVLTA 540



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 229/524 (43%), Gaps = 78/524 (14%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           A SLV  YA       +   FDA+P   R  V  N++ S Y        AV  F+ ++ S
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 91  G-IRPNEFSLSSMINACAGSGDSLLGR---KIHGYSIKLGYDSDMFSANALVDMYAKV-- 144
           G +RP+++S +++++A  G   ++  R   ++H   +K G    +   NALV +Y K   
Sbjct: 151 GSLRPDDYSFTALLSA-GGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCES 209

Query: 145 --------------------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
                                           G++  A +VF++++    V WNA+I+G 
Sbjct: 210 PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGY 269

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           V       A +LF++M    +  + FT+TS L ACA + L   G+ +H  +I+++    P
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVP 329

Query: 233 ----IVGVGLVDMYAKCGS-------------------------------MDEARMIFHL 257
                V   LV  Y+KCG+                               +D+A  +F  
Sbjct: 330 EAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP KN ++W +++SG++  G   +A  LF  M  E V     T +  + +     A+   
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG 449

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ+H   V+  FE  +   N+LI  Y +CG V++A  +F     +D V+  +MI+A  Q 
Sbjct: 450 KQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQH 509

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFA 436
           G G EAL+L+  M    I PD     ++L AC +    ++G +    + + FG +     
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDH 569

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
              L+++  + G I +A      +P     S W A++ G    G
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 155/318 (48%), Gaps = 38/318 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVF--TGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VL AC +      G  VHG ++     F  ++   V N+LV  Y+KCGN   +RR+FD +
Sbjct: 300 VLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359

Query: 57  PERSVVSWNSLFS------C-------------------------YVHCDFLEEAVCFFK 85
             + VVSWN++ S      C                         YVH  F E+A+  F 
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M    ++P +++ +  I AC   G    G+++HG+ ++LG++    + NAL+ MYA+ G
Sbjct: 420 KMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +++A  +F  + + D VSWNA+I+    H H   AL+LF +M +  I P+  ++ + L 
Sbjct: 480 AVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539

Query: 206 ACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
           AC    L + G +   S+ +   I         L+D+  + G + EAR +   MP E   
Sbjct: 540 ACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTP 599

Query: 264 IAWNIVISGHLQNGGDME 281
             W  ++SG  +  GDME
Sbjct: 600 SIWEAILSG-CRTSGDME 616


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/679 (36%), Positives = 406/679 (59%), Gaps = 6/679 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L+ ++  C+ +G    G ++H  ++ +G+  D+   N L+DMY K   ++ A +VF  + 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             ++VSW A++ G +   +   +L L  +M  S + PN FT++++LKAC  + + E G Q
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H   +K   +   +VG   +DMY+KCG +  A  +F+ MP +NL++WN +I+GH   G 
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD--DYIV 336
             ++  LF  M  +G   D+ T ++ LK+  +  AI    Q+HA  +   F     + I 
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           ++++D Y KCG++ +A K+F      +L++ +++I  +AQ G   EA+ L+ ++++   N
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            D FV S ++   A+L+  EQGKQ+H +I+K     D    NS+++MY KCG  ++A+R 
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERL 366

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           FSE+  R +VSW+ MI G  +HG G++A+ +F +M  DG+  + +  +++L AC+H+GL+
Sbjct: 367 FSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLI 426

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            E++ +F  +     ++P  EHYACM+DILGRAG+ +EA  L++ M  + N  +W  LL 
Sbjct: 427 RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLS 486

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A R++ N+E+G+   E+LF ++ +    +V++SNIYA AG W    +VR+ +K   LKKE
Sbjct: 487 ACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKE 546

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN-KAGYVPMVETDLHDVEESE 695
            G SW+E+  +++ F  GD +H  +++I+  L E+   +  + GY   +   LHDVEE  
Sbjct: 547 AGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEES 606

Query: 696 KEQLLYHHSEKLAVAFGLIA---TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           KE+ L  HSEKLA+   L+       G  IRV KNLR+C DCH   + +SKI+ +  +VR
Sbjct: 607 KEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVR 666

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D NRFH F +G CSCG YW
Sbjct: 667 DANRFHRFEDGLCSCGDYW 685



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 167/504 (33%), Positives = 257/504 (50%), Gaps = 13/504 (2%)

Query: 1   VLKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+ C SK  LF  GLQVH   V  GF  D  + N L+ MY KC     +  +FD + ER
Sbjct: 10  LLRNC-SKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLER 68

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSW +L   Y+     + ++    EM  SG++PNEF+ S+ + AC   G    G +IH
Sbjct: 69  NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIH 128

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K G++      NA +DMY+K G +  A  VF  +   ++VSWNA+IAG     +  
Sbjct: 129 GMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGR 188

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK--MEIKSDPIVGVG 237
            +L LFQ+M+     P+ FT+TS LKAC  +     G Q+H SLI     I    I+   
Sbjct: 189 KSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASA 248

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           +VD+YAKCG + EA+ +F  + +KNLI+W+ +I G  Q G  +EA  LF  +       D
Sbjct: 249 IVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVD 308

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
              LS ++   A    +   KQ+H   +K     D  + NS+ID Y KCG  E+A ++F 
Sbjct: 309 GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFS 368

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    ++V+ T MIT Y + GLGE+A+ L+  MQ   I  D     +LL+AC++     +
Sbjct: 369 EMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRE 428

Query: 418 GKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIG 473
            ++    +     M       + +V++  + G + +A      +   P+ GI  W  ++ 
Sbjct: 429 SQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGI--WQTLLS 486

Query: 474 GLAQHGR---GKEALQMFGQMLED 494
               HG    G+E  ++  +M  D
Sbjct: 487 ACRVHGNLEIGREVGEILFRMDTD 510


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/665 (38%), Positives = 393/665 (59%), Gaps = 37/665 (5%)

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
           S  +   + +H   +  G    +F +  LV++YA +G++  +   F  I   D+ +WN++
Sbjct: 29  STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 88

Query: 169 IAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           I+  V + H   A+  F Q+   SEI P+ +T+   LKAC  +     GR++HC   K+ 
Sbjct: 89  ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLG 145

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
            + +  V   L+ MY++ G    AR +F  MP +++ +WN +ISG +QNG   +A  +  
Sbjct: 146 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 205

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M  EG+  +  T+ ++L                                  +D Y K G
Sbjct: 206 EMRLEGIKMNFVTVVSILPV-------------------------------FVDMYAKLG 234

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLL 406
            ++ A K+F+     D+++  ++IT YAQ GL  EA+++Y  M++ +EI P+     S+L
Sbjct: 235 LLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 294

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            A A++ A +QG ++H  +IK     D F    L+++Y KCG + DA   F ++P    V
Sbjct: 295 PAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV 354

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           +W+A+I     HG  ++ L++FG+ML++GV P+H+T VS+L AC+H+G V E K  F  M
Sbjct: 355 TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 414

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
           ++ +GI+P  +HY CM+D+LGRAG  + A + +  MP Q +AS+WGALLGA RI+ N+E+
Sbjct: 415 QE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIEL 473

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G+ A++ LF ++ +    +VLLSNIYA+ G W+ V KVR   ++  LKK PG S IEV  
Sbjct: 474 GKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNR 533

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEK 706
           KV  F  G++SH + KEIY +L  ++  +   GY+P     L DVEE EKE +L  HSE+
Sbjct: 534 KVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSER 593

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCS 766
           LA+AFG+I+TPP + IR+ KNLR+C DCH + +FIS+I  REI+VRD NRFHHF++G CS
Sbjct: 594 LAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICS 653

Query: 767 CGGYW 771
           CG YW
Sbjct: 654 CGDYW 658



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 239/466 (51%), Gaps = 37/466 (7%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H ++V  G     F++  LV +YA  G+   SR  FD IP++ V +WNS+ S YVH   
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97

Query: 77  LEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             EA+ CF++ +++S IRP+ ++   ++ AC   G  + GRKIH ++ KLG+  ++F A 
Sbjct: 98  FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAA 154

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ MY++ G    A ++F D+   D+ SWNA+I+G + + +   AL +  +M+   I  
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 214

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N  T  S L                           P+     VDMYAK G +D A  +F
Sbjct: 215 NFVTVVSIL---------------------------PV----FVDMYAKLGLLDSAHKVF 243

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAI 314
            ++P K++I+WN +I+G+ QNG   EA  ++  M   + +  +Q T  ++L + A   A+
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
               ++H   +KT    D ++   LID YGKCG + DA+ +F +      V   ++I+ +
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 363

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
              G  E+ LKL+ EM D  + PD     SLL+AC++    E+GK     + ++G     
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSL 423

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
                +V++  + G ++ A     ++P +   S W A++G    HG
Sbjct: 424 KHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 208/484 (42%), Gaps = 91/484 (18%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC +  D   G ++H      GF  + FVA SL+ MY++ G    +R LFD +P R 
Sbjct: 124 VLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRD 180

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SWN++ S  +      +A+    EM L GI+ N  ++ S++                 
Sbjct: 181 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV--------------- 225

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                            VDMYAK+G L+ A  VF+ I   D++SWN +I G   +     
Sbjct: 226 ----------------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASE 269

Query: 181 ALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A+++++ M+   EI PN  T+ S L A A +   + G ++H  +IK  +  D  V   L+
Sbjct: 270 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLI 329

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KCG + +A  +F+ +P+++ + WN +IS H  +G   +   LF  M  EGV  D  
Sbjct: 330 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 389

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L + +    +   K    L  +   +        ++D  G+ G++E A       
Sbjct: 390 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA------- 442

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                                      Y  ++D  + PD+ +  +LL AC      E GK
Sbjct: 443 ---------------------------YDFIKDMPLQPDASIWGALLGACRIHGNIELGK 475

Query: 420 QVHVHIIKFGFMSDT-FAGNS--------LVNMYAKCGSIDDADRAFSEIPDRGI---VS 467
                     F SD  F  +S        L N+YA  G  +  D+  S   +RG+     
Sbjct: 476 ----------FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPG 525

Query: 468 WSAM 471
           WS +
Sbjct: 526 WSTI 529


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/657 (39%), Positives = 393/657 (59%), Gaps = 43/657 (6%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAK--VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           ++HG  ++ G+  D + + AL+  YA     N + A+ VF  I +P++  WN VI GC+ 
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +     A+  + +M   +  PN FTY +  KAC+  +  + GRQ+H  ++K  I SD  +
Sbjct: 111 NNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               + MYA  G +++AR +F+   E +++ WN +I G+L+ G    A  LF  M     
Sbjct: 170 KSAGIHMYASFGRLEDARKMFY-SGESDVVCWNTMIDGYLKCGVLEAAKGLFAQM----- 223

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
                     +K++ S+                         N +I+   K G++ DA K
Sbjct: 224 ---------PVKNIGSW-------------------------NVMINGLAKGGNLGDARK 249

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E S  D ++ +SM+  Y   G  +EAL+++ +MQ  E  P  F+ SS+L AC+N+ A
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            +QG+ VH ++ +     D   G +L++MYAKCG +D     F E+ +R I +W+AMIGG
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
           LA HGR ++AL++F ++ E  + PN ITLV VL AC HAG V +    F++M + +G+ P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHY CM+D+LGR+G F EA +L+++MP + NA+VWGALLGA RI+ N ++ +   ++L
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             +EP+ S  +VLLSNIYA  G +D+V+K+R+ MKD  +K  PG+S +++   V+ F +G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH + KEIY KL  + + L  AG+ P     L D++E EKE  + +HSEKLA+AFGLI
Sbjct: 550 DGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T PG  I + KNLR+C DCH++ + IS+I  REIIVRD  R+HHF+NG+CSC  +W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 227/472 (48%), Gaps = 53/472 (11%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+HG+V+ +G   D +V+ +L+  YA     NF  + ++F +IP  +V  WN +    + 
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            + L +A+ F+  MV+   RPN+F+  ++  AC+ +     GR+IHG+ +K G  SD+  
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +A + MYA  G LEDA  +F   E  D+V WN +I G +     + A  LF QM     
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQM----- 223

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG----LVDMYAKCGSMD 249
                                                 P+  +G    +++  AK G++ 
Sbjct: 224 --------------------------------------PVKNIGSWNVMINGLAKGGNLG 245

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +AR +F  M E++ I+W+ ++ G++  G   EA  +F  M RE     +  LS+VL + +
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACS 305

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +  AI   + VHA   + + + D  +  +L+D Y KCG ++   ++F+E    ++    +
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF- 428
           MI   A  G  E+AL+L+ ++Q+  + P+      +L ACA+    ++G ++   + +F 
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHG 479
           G   +      +V++  + G   +A+   + +P +     W A++G    HG
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 204/472 (43%), Gaps = 88/472 (18%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + KAC+  + +  G Q+HG VV  G  SD  + ++ + MYA  G   D+R++F +  E  
Sbjct: 138 LFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESD 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WN++   Y+ C  LE A   F +M +  I                            
Sbjct: 197 VVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG--------------------------- 229

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                       S N +++  AK GNL DA  +F ++   D +SW++++ G +       
Sbjct: 230 ------------SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKE 277

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++FQQM+  E  P  F  +S L AC+ +   + GR +H  L +  IK D ++G  L+D
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLD 337

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +D    +F  M E+ +  WN +I G   +G   +A  LF  +    +  +  T
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---K 357
           L  VL + A           HA                        G V+  ++IF   +
Sbjct: 398 LVGVLTACA-----------HA------------------------GFVDKGLRIFQTMR 422

Query: 358 ESSAVD--LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           E   VD  L     M+    + GL  EA  L   M    + P++ V  +LL AC     +
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGACRIHGNF 479

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           +  ++V   +++   +    +G    L N+YAK G  DD  +    + DRGI
Sbjct: 480 DLAERVGKILLE---LEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI 528



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 69/343 (20%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC--GHVEDAVKIFKESSAVD 363
           KS+ S Q +    Q+H L +++    D Y+  +L+  Y      + + A+K+F      +
Sbjct: 41  KSITSLQYL---TQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPN 97

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           +     +I    +     +A+  Y  M   +  P+ F   +L  AC+   A ++G+Q+H 
Sbjct: 98  VFIWNIVIKGCLENNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHG 156

Query: 424 HIIKFGFMSDT-----------------------FAG-------NSLVNMYAKCGSIDDA 453
           H++K G  SD                        ++G       N++++ Y KCG ++ A
Sbjct: 157 HVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAA 216

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQ-------------------------------HGRGK 482
              F+++P + I SW+ MI GLA+                                GR K
Sbjct: 217 KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYK 276

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EAL++F QM  +   P    L SVL AC++ G + + +    +  K+  I+        +
Sbjct: 277 EALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGR-WVHAYLKRNSIKLDAVLGTAL 335

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           +D+  + G+     E+ + M  +     W A++G   I+   E
Sbjct: 336 LDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/756 (37%), Positives = 448/756 (59%), Gaps = 9/756 (1%)

Query: 24   TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
            + F  D +V ++LV  +A+ G    ++ +F+ + +R+ V+ N L          EEA   
Sbjct: 279  SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338

Query: 84   FKEMV-LSGIRPNEFS--LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVD 139
            FKEM  L  I  + ++  LS+             G+++H Y I+    D  +   NALV+
Sbjct: 339  FKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVN 398

Query: 140  MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
            +YAK   +++A ++F+ +   D VSWN++I+G   +E  + A+  F  M+ + + P+ F+
Sbjct: 399  LYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFS 458

Query: 200  YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
              S L +CA +    LG+Q+H   IK  +  D  V   L+ +YA+   M+E + +F LMP
Sbjct: 459  VISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518

Query: 260  EKNLIAWNIVISGHLQNGGD-MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            E + ++WN  I     +    ++A   F  M + G   ++ T   +L +V+S   + + +
Sbjct: 519  EYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGR 578

Query: 319  QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQF 377
            Q+HAL +K +   D+ I N+L+  YGKC  +ED   IF + S   D V+  +MI+ Y   
Sbjct: 579  QIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHN 638

Query: 378  GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
            G+  +A+ L   M  +    D F  +++L+ACA+++  E+G +VH   I+    ++   G
Sbjct: 639  GILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVG 698

Query: 438  NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            ++LV+MYAKCG ID A R F  +P R I SW++MI G A+HG G +AL++F QM + G L
Sbjct: 699  SALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQL 758

Query: 498  PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            P+H+T V VL AC+H GLV E   HF+SM + + + P  EH++CM+D+LGRAG  ++  E
Sbjct: 759  PDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEE 818

Query: 558  LVDTMPFQANASVWGALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
             + TMP   NA +W  +LGA      +N E+G+ AA+ML  +EP  +  +VLLSN++A+ 
Sbjct: 819  FIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAG 878

Query: 616  GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            G W++V + R  M++ ++KKE G SW+ +KD V+ F  GD++H   ++IY KL E+ + +
Sbjct: 879  GKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKM 938

Query: 676  NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
               GYVP  +  L+D+E   KE+LL +HSEKLA+AF ++       IR+ KNLR+C DCH
Sbjct: 939  RDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRIIKNLRVCGDCH 997

Query: 736  TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T+F++IS IV+R+II+RD NRFHHF  G CSC  YW
Sbjct: 998  TAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 273/510 (53%), Gaps = 24/510 (4%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  +  TG  SD F  N+LV ++ + GN + +++LFD +P++++VSW+ L S Y    
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL--LGRKIHGYSIKLGYDSDMFS 133
             +EA   F+ ++ +G+ PN +++ S + AC   G ++  LG +IHG   K  Y SDM  
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179

Query: 134 ANALVDMYAKV-GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK--S 190
           +N L+ MY+    +++DA  VF++I+     SWN++I+          A KLF  M+  +
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239

Query: 191 SEIN--PNMFTYTSALK-ACA----GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           +E+N  PN +T+ S +  AC+    G+ L E   Q+   + K     D  VG  LV  +A
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDCGLTLLE---QMLARIEKSSFVKDLYVGSALVSGFA 296

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
           + G +D A+MIF  M ++N +  N ++ G  +     EAA +F  M ++ V  + ++ + 
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAV 355

Query: 304 VLKSVASFQAIGVCK----QVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFK 357
           +L +   F  +   K    +VHA  ++ A   D +I+  N+L++ Y KC  +++A  IF+
Sbjct: 356 LLSAFTEFSNLKEGKRKGQEVHAYLIRNAL-VDVWILIGNALVNLYAKCNAIDNARSIFQ 414

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
              + D V+  S+I+        EEA+  +  M+   + P  F   S L++CA+L     
Sbjct: 415 LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIML 474

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA- 476
           G+Q+H   IK G   D    N+L+ +YA+   +++  + F  +P+   VSW++ IG LA 
Sbjct: 475 GQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALAT 534

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
                 +A++ F +M++ G  PN +T +++
Sbjct: 535 SEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 176/600 (29%), Positives = 299/600 (49%), Gaps = 30/600 (5%)

Query: 2   LKACTS--KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLFDAIPE 58
           L+AC       L LG+++HG++  + + SD  ++N L+ MY+ C   I D+RR+F+ I  
Sbjct: 147 LRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKM 206

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI----RPNEFSLSSMIN-ACA--GSGD 111
           ++  SWNS+ S Y        A   F  M         RPNE++  S++  AC+    G 
Sbjct: 207 KTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGL 266

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           +LL + +     K  +  D++  +ALV  +A+ G ++ A  +F+ ++  + V+ N ++ G
Sbjct: 267 TLLEQMLARIE-KSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVG 325

Query: 172 CVLHEHNDWALKLFQQMKS-SEINP-------NMFTYTSALKACAGMELKELGRQLHCSL 223
                  + A K+F++MK   EIN        + FT  S LK     E K  G+++H  L
Sbjct: 326 LARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLK-----EGKRKGQEVHAYL 380

Query: 224 IKMEIKSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           I+  +    I +G  LV++YAKC ++D AR IF LMP K+ ++WN +ISG   N    EA
Sbjct: 381 IRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEA 440

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
            + F  M R G+   + ++ + L S AS   I + +Q+H   +K   + D  + N+L+  
Sbjct: 441 VACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTL 500

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE-EALKLYLEMQDREINPDSFV 401
           Y +   +E+  K+F      D V+  S I A A       +A+K +LEM      P+   
Sbjct: 501 YAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVT 560

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
             ++L+A ++LS  E G+Q+H  I+K     D    N+L+  Y KC  ++D +  FS + 
Sbjct: 561 FINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMS 620

Query: 462 D-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           + R  VSW+AMI G   +G   +A+ +   M++ G   +  TL +VL AC     + E  
Sbjct: 621 ERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATL-ERG 679

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
               +   +  ++      + ++D+  + GK   A    + MP + N   W +++ G AR
Sbjct: 680 MEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYAR 738



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 228/486 (46%), Gaps = 47/486 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L +C S   + LG Q+HG  +  G D D  V+N+L+ +YA+     + +++F  +PE  
Sbjct: 462 TLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYD 521

Query: 61  VVSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VSWNS        +  + +A+ +F EM+ +G +PN  +  ++++A +      LGR+IH
Sbjct: 522 QVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIH 581

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHN 178
              +K     D    N L+  Y K   +ED   +F  + E  D VSWNA+I+G + +   
Sbjct: 582 ALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGIL 641

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ L   M       + FT  + L ACA +   E G ++H   I+  ++++ +VG  L
Sbjct: 642 HKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSAL 701

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMYAKCG +D A   F LMP +N+ +WN +ISG+ ++G   +A  LF  M + G   D 
Sbjct: 702 VDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDH 761

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL + +           H   V   FE       S+ + Y      E A +I   
Sbjct: 762 VTFVGVLSACS-----------HVGLVDEGFEH----FKSMGEVY------ELAPRIEHF 800

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYE 416
           S  VDL+            G   +  KL   ++   +NP++ +  ++L AC  AN    E
Sbjct: 801 SCMVDLL------------GRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTE 848

Query: 417 QGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAF-----SEIPDRGIVSWS 469
            G++    +I+   ++   A N   L NM+A  G  +D + A      +E+      SW 
Sbjct: 849 LGRRAAKMLIELEPLN---AVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWV 905

Query: 470 AMIGGL 475
            M  G+
Sbjct: 906 TMKDGV 911



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 150/287 (52%), Gaps = 9/287 (3%)

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           E   QLH  + K  + SD      LV+++ + G++  A+ +F  MP+KNL++W+ ++SG+
Sbjct: 56  EDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGY 115

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF--QAIGVCKQVHALSVKTAFES 331
            QNG   EA  LF  +   G+  +   + + L++        + +  ++H L  K+ + S
Sbjct: 116 AQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYAS 175

Query: 332 DDYIVNSLIDAYGKC-GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           D  + N L+  Y  C   ++DA ++F+E       +  S+I+ Y + G    A KL+  M
Sbjct: 176 DMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSM 235

Query: 391 QDR--EIN--PDSFVCSSLLNACANL--SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           Q    E+N  P+ +   SL+    +L        +Q+   I K  F+ D + G++LV+ +
Sbjct: 236 QREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGF 295

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           A+ G ID A   F ++ DR  V+ + ++ GLA+  +G+EA ++F +M
Sbjct: 296 ARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM 342



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 59/99 (59%)

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E   Q+H+ I K G  SD F  N+LVN++ + G++  A + F E+P + +VSWS ++ G 
Sbjct: 56  EDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGY 115

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           AQ+G   EA  +F  ++  G+LPNH  + S L AC   G
Sbjct: 116 AQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/770 (36%), Positives = 442/770 (57%), Gaps = 12/770 (1%)

Query: 13   LGL--QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
            LGL  Q+   V+ +G  SD +V ++LV  +A+ G   +++ ++  + ER+ V+ N L + 
Sbjct: 294  LGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAG 353

Query: 71   YVHCDFLEEAVCFF---KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
             V     E A   F   ++     +      LS++            GR++H + ++ G+
Sbjct: 354  LVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGH 413

Query: 128  DSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
                 + +N LV+MYAK G ++ A  VF+ +E  D +SWN +I     + + + A+  + 
Sbjct: 414  IYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYC 473

Query: 187  QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
             M+ + I P+ F   S L +CAG+ L   G+QLHC  +K  +  D  V   LV MY +CG
Sbjct: 474  LMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECG 533

Query: 247  SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREGVGFDQTTLSTVL 305
             M E   IF+ M   ++++WN ++     +   + E+  +F  M + G+  ++ T    L
Sbjct: 534  RMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFL 593

Query: 306  KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDL 364
             ++     + + KQ+H++ +K     D+ + N+L+  Y K G V+   ++F + S   D 
Sbjct: 594  AALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDA 653

Query: 365  VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            ++  SMI+ Y   G  +EA+     M   E   D    S +LNACA+++A E+G ++H  
Sbjct: 654  ISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAF 713

Query: 425  IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
             ++    SD    ++LV+MY+KCG ID A + F  +  +   SW++MI G A+HG G++A
Sbjct: 714  GLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKA 773

Query: 485  LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
            L++F +M E G  P+H+T VSVL AC+HAGLV     +FE ME  +GI P  EHY+C+ID
Sbjct: 774  LEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCVID 832

Query: 545  ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN---VEVGQHAAEMLFAIEPEK 601
            +LGRAG+  +  E +  MP + N  +W  +L A +  K+   +++G  A+ ML  +EP+ 
Sbjct: 833  LLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQN 892

Query: 602  SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
               +VL S  +A+ G W++ AK R  MK   +KKE G SW+ + D V+TF  GDRSH  +
Sbjct: 893  PVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNT 952

Query: 662  KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            KEIY KL+ +   +  AGYVP+ E  LHD+EE  KE+LL +HSEKLAVAF L  +  G  
Sbjct: 953  KEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGP 1012

Query: 722  IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IR+ KNLR+C DCHT+F +IS+IV R+II+RD  RFHHF++G CSCG YW
Sbjct: 1013 IRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 318/639 (49%), Gaps = 39/639 (6%)

Query: 1   VLKACTSKKDLFLG--LQVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAI 56
           VL+AC       LG  +QVHG+V  T F S+  V N+L+ MY  C  G  I ++R+FD  
Sbjct: 174 VLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTT 233

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVC---FFKEMVL--SGI--RPNEFSLSSMINACAGS 109
           P R +++WN+L S Y       +A+C    F+ M    SGI  RP E +  S+I A   S
Sbjct: 234 PVRDLITWNALMSVYAK---RGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLS 290

Query: 110 GDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
             SL L  ++    +K G  SD++  +ALV  +A+ G L++A  ++  ++  + V+ N +
Sbjct: 291 SCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGL 350

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL----GRQLHCSLI 224
           IAG V  +H + A ++F   + S    N+ TY   L A A     E     GR++H  ++
Sbjct: 351 IAGLVKQQHGEAAAEIFMGARDSAA-VNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVL 409

Query: 225 KM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
           +   I     V  GLV+MYAKCG++D+A  +F LM  ++ I+WN +I+   QNG    A 
Sbjct: 410 RAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAM 469

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
             +  M +  +G       + L S A    +   +Q+H  +VK     D  + N+L+  Y
Sbjct: 470 MNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMY 529

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSM--ITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
           G+CG + +  +IF   SA D+V+  S+  + A +Q  +  E+++++  M    + P+   
Sbjct: 530 GECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPI-TESVQVFSNMMKSGLVPNKVT 588

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
             + L A   LS  E GKQ+H  ++K G   D    N+L++ YAK G +D  +R FS + 
Sbjct: 589 FVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMS 648

Query: 462 D-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R  +SW++MI G   +G  +EA+     M+    + +H T   VL AC     VA  +
Sbjct: 649 GRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNAC---ASVAALE 705

Query: 521 HHFESMEKKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
              E     FG++   E      + ++D+  + G+   A ++  +M  Q N   W +++ 
Sbjct: 706 RGMEM--HAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMS-QKNEFSWNSMIS 762

Query: 577 AARIYKNVEVGQHAAEMLFAI-EPEKSSTHVLLSNIYAS 614
               Y    +G+ A E+   + E  +S  HV   ++ ++
Sbjct: 763 G---YARHGLGRKALEIFEEMQESGESPDHVTFVSVLSA 798



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 169/577 (29%), Positives = 276/577 (47%), Gaps = 21/577 (3%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  VV  G   D F+AN LV  YAK      +RR+FD +P R+ VSW  L S +V    
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 77  LEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLLG--RKIHGYSIKLGYDSDMF 132
            E+A   F+ M+    G RP  F+  S++ AC  SG   LG   ++HG   K  + S+  
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 133 SANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
             NAL+ MY    VG    A  VF      D+++WNA+++             LF+ M+ 
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 191 S----EINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
                E+ P   T+ S + A   +    LG   QL   ++K    SD  VG  LV  +A+
Sbjct: 267 DDSGIELRPTEHTFGSLITATY-LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFAR 325

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G +DEA+ I+  + E+N +  N +I+G ++      AA +F    R+    +  T   +
Sbjct: 326 HGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGA-RDSAAVNVDTYVVL 384

Query: 305 LKSVASF----QAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKES 359
           L ++A F    Q +   ++VHA  ++         V N L++ Y KCG ++ A ++F+  
Sbjct: 385 LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLM 444

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
            A D ++  ++ITA  Q G  E A+  Y  M+   I P +F   S L++CA L     G+
Sbjct: 445 EARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQ 504

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA-QH 478
           Q+H   +K+G   DT   N+LV MY +CG + +    F+ +    +VSW++++G +A   
Sbjct: 505 QLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQ 564

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
               E++Q+F  M++ G++PN +T V+ L A      V E      S+  K G+      
Sbjct: 565 APITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLS-VLELGKQIHSVMLKHGVTEDNAV 623

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              ++    ++G       L   M  + +A  W +++
Sbjct: 624 DNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMI 660



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 205/428 (47%), Gaps = 35/428 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C     L  G Q+H   V  G   D  V+N+LV MY +CG   +   +F+++    V
Sbjct: 491 LSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDV 550

Query: 62  VSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSWNS+          + E+V  F  M+ SG+ PN+ +  + + A        LG++IH 
Sbjct: 551 VSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHS 610

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
             +K G   D    NAL+  YAK G+++    +F  +    D +SWN++I+G + + H  
Sbjct: 611 VMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+     M  SE   +  T++  L ACA +   E G ++H   ++  ++SD +V   LV
Sbjct: 671 EAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALV 730

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KCG +D A  +FH M +KN  +WN +ISG+ ++G   +A  +F  M   G   D  
Sbjct: 731 DMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHV 790

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFE----SDDYIV-------NSLIDAYGKCGH 348
           T  +VL + +           HA  V+   +     +DY +       + +ID  G+ G 
Sbjct: 791 TFVSVLSACS-----------HAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGE 839

Query: 349 VEDAVKIFKESS--------AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           ++   +  K              LVAC       A+  LG EA ++ LE++ +  NP ++
Sbjct: 840 LDKIQEYMKRMPMKPNTLIWRTVLVACQQS-KHRAKIDLGTEASRMLLELEPQ--NPVNY 896

Query: 401 VCSSLLNA 408
           V SS  +A
Sbjct: 897 VLSSKFHA 904



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 6/183 (3%)

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           + +H   VK     D ++ N L+++Y K   ++ A ++F      + V+ T +I+ +   
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 378 GLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVH--IIKFGFMSD 433
           GL E+A  L+  M  +     P SF   S+L AC +      G  V VH  + K  F S+
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 434 TFAGNSLVNMYAKC--GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           T   N+L++MY  C  G    A R F   P R +++W+A++   A+ G       +F  M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 492 LED 494
             D
Sbjct: 265 QYD 267



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 5/181 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC S   L  G+++H   + +  +SD  V ++LV MY+KCG    + ++F ++ +++
Sbjct: 694 VLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKN 753

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SWNS+ S Y       +A+  F+EM  SG  P+  +  S+++AC+ +G  L+ R +  
Sbjct: 754 EFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAG--LVERGLDY 811

Query: 121 YSIKLGYD--SDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           + +   Y     +   + ++D+  + G L+      K +   P+ + W  V+  C   +H
Sbjct: 812 FELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKH 871

Query: 178 N 178
            
Sbjct: 872 R 872



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           + +H+ ++K G   D F  N LVN YAK   +D A R F  +P R  VSW+ +I G    
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 479 GRGKEALQMFGQMLED--GVLPNHITLVSVLCACNHAG 514
           G  ++A  +F  ML +  G  P   T  SVL AC  +G
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSG 182


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 399/744 (53%), Gaps = 75/744 (10%)

Query: 103 INACAGSGDSLL--GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED---AVAVFKDI 157
           ++ C  S  + L   R+ H   ++L   SD     +L+  YA   +L     ++ +   +
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
            HP + S++++I       H    L  F  +    + P+ F   SA+K+CA +   + G+
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP------------------ 259
           QLH         +D IV   L  MY KC  + +AR +F  MP                  
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184

Query: 260 -----------------EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
                            E NL++WN +++G   NG   EA  +F  M  +G   D +T+S
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
            VL +V   + + V  QVH   +K    SD ++V++++D YGKCG V++  ++F E   +
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304

Query: 363 DL-----------------------------------VACTSMITAYAQFGLGEEALKLY 387
           ++                                   V  TS+I + +Q G   EAL+L+
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            +MQ   + P++    SL+ AC N+SA   GK++H   ++ G   D + G++L++MYAKC
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC 424

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G I  A R F ++    +VSW+A++ G A HG+ KE ++MF  ML+ G  P+ +T   VL
Sbjct: 425 GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVL 484

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC   GL  E    + SM ++ GI+P  EHYAC++ +L R GK +EA  ++  MPF+ +
Sbjct: 485 SACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPD 544

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           A VWGALL + R++ N+ +G+ AAE LF +EP     ++LLSNIYAS G+WD   ++R  
Sbjct: 545 ACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREV 604

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MK   L+K PG SWIEV  KV+    GD+SH + K+I  KLD+++  + K+GY+P     
Sbjct: 605 MKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFV 664

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           L DVEE +KEQ+L  HSEKLAV  GL+ T PG  ++V KNLRIC DCH   + IS++  R
Sbjct: 665 LQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGR 724

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EI VRD NRFHHF++G CSCG +W
Sbjct: 725 EIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 161/588 (27%), Positives = 257/588 (43%), Gaps = 130/588 (22%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K+C S + L  G Q+H     +GF +D  VA+SL  MY KC   +D+R+LFD +P+R V
Sbjct: 111 IKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDV 170

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG----------- 110
           V W+++ + Y     +EEA   F EM   G+ PN  S + M+     +G           
Sbjct: 171 VVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRM 230

Query: 111 ------------------------DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
                                   D ++G ++HGY IK G  SD F  +A++DMY K G 
Sbjct: 231 MLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGC 290

Query: 147 LEDAVAVFKDIEHPDI-----------------------------------VSWNAVIAG 171
           +++   VF ++E  +I                                   V+W ++IA 
Sbjct: 291 VKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIAS 350

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
           C  +  +  AL+LF+ M++  + PN  T  S + AC  +     G+++HC  ++  I  D
Sbjct: 351 CSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDD 410

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             VG  L+DMYAKCG +  AR  F  M   NL++WN V+ G+  +G   E   +F  M +
Sbjct: 411 VYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQ 470

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            G   D  T + VL + A           + L+     E      NS+ + +G    +E 
Sbjct: 471 SGQKPDLVTFTCVLSACAQ----------NGLT-----EEGWRCYNSMSEEHG----IEP 511

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA- 410
            ++ +         AC  ++T  ++ G  EEA  +  EM      PD+ V  +LL++C  
Sbjct: 512 KMEHY---------AC--LVTLLSRVGKLEEAYSIIKEM---PFEPDACVWGALLSSCRV 557

Query: 411 --NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI- 465
             NLS  E   +      K  F+  T  GN ++  N+YA  G  D+ +R    +  +G+ 
Sbjct: 558 HNNLSLGEIAAE------KLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLR 611

Query: 466 ----VSW-------SAMIGGLAQHGRGKEALQMFG----QMLEDGVLP 498
                SW         ++ G   H + K+ L+       QM + G LP
Sbjct: 612 KNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLP 659



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 128/548 (23%), Positives = 231/548 (42%), Gaps = 75/548 (13%)

Query: 6   TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIPERSVV 62
           +S   L    Q H +++     SD  +  SL+  YA   +      S  L   +P  ++ 
Sbjct: 11  SSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLF 70

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           S++SL   +         +  F  +    + P+ F L S I +CA       G+++H ++
Sbjct: 71  SFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFA 130

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
              G+ +D   A++L  MY K   + DA  +F  +   D+V W+A+IAG       + A 
Sbjct: 131 AASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAK 190

Query: 183 KLFQQMKSSEINPNMF-----------------------------------TYTSALKAC 207
           +LF +M+S  + PN+                                    T +  L A 
Sbjct: 191 ELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAV 250

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK------ 261
             +E   +G Q+H  +IK  + SD  V   ++DMY KCG + E   +F  + E       
Sbjct: 251 GCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLN 310

Query: 262 -----------------------------NLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
                                        N++ W  +I+   QNG D+EA  LF  M   
Sbjct: 311 AFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAY 370

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           GV  +  T+ +++ +  +  A+   K++H  S++     D Y+ ++LID Y KCG ++ A
Sbjct: 371 GVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLA 430

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            + F + SA++LV+  +++  YA  G  +E ++++  M      PD    + +L+ACA  
Sbjct: 431 RRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQN 490

Query: 413 SAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              E+G + +  +  + G          LV + ++ G +++A     E+P +     W A
Sbjct: 491 GLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGA 550

Query: 471 MIGGLAQH 478
           ++     H
Sbjct: 551 LLSSCRVH 558



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 45/329 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VL A    +D+ +G QVHG V+  G  SD+FV ++++ MY KCG   +  R+FD + E  
Sbjct: 246 VLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEME 305

Query: 60  ----------------------------------SVVSWNSLF-SCYVHCDFLEEAVCFF 84
                                             +VV+W S+  SC  +   L EA+  F
Sbjct: 306 IGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDL-EALELF 364

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           ++M   G+ PN  ++ S+I AC      + G++IH +S++ G   D++  +AL+DMYAK 
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC 424

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G ++ A   F  +   ++VSWNAV+ G  +H      +++F  M  S   P++ T+T  L
Sbjct: 425 GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVL 484

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EK 261
            ACA   L E G + + S+ + E   +P +     LV + ++ G ++EA  I   MP E 
Sbjct: 485 SACAQNGLTEEGWRCYNSMSE-EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEP 543

Query: 262 NLIAWNIVISG-HLQNG---GDMEAASLF 286
           +   W  ++S   + N    G++ A  LF
Sbjct: 544 DACVWGALLSSCRVHNNLSLGEIAAEKLF 572



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 177/396 (44%), Gaps = 41/396 (10%)

Query: 203 ALKACAGMELKEL--GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL--- 257
           AL  C       L   RQ H  ++++ + SD  +   L+  YA   S+   ++   L   
Sbjct: 4   ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           +P   L +++ +I    ++       + F  ++   +  D   L + +KS AS +A+   
Sbjct: 64  LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           +Q+HA +  + F +D  + +SL   Y KC  + DA K+F      D+V  ++MI  Y++ 
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ-------------------- 417
           GL EEA +L+ EM+   + P+    + +L    N   Y++                    
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243

Query: 418 ---------------GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
                          G QVH ++IK G  SD F  +++++MY KCG + +  R F E+ +
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
             I S +A + GL+++G    AL++F +  +  +  N +T  S++ +C+  G   EA   
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           F  M+  +G++P       +I   G         E+
Sbjct: 364 FRDMQ-AYGVEPNAVTIPSLIPACGNISALMHGKEI 398



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 13/218 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC +   L  G ++H   +  G   D +V ++L+ MYAKCG    +RR FD +   +
Sbjct: 382 LIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALN 441

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           +VSWN++   Y      +E +  F  M+ SG +P+  + + +++ACA +G +  G R  +
Sbjct: 442 LVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYN 501

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S + G +  M     LV + ++VG LE+A ++ K++   PD   W A+++ C +  HN
Sbjct: 502 SMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRV--HN 559

Query: 179 DWAL------KLFQQMKSSEINPNMFTYTSALKACAGM 210
           + +L      KLF        NP  +   S + A  G+
Sbjct: 560 NLSLGEIAAEKLFFL---EPTNPGNYILLSNIYASKGL 594


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/678 (38%), Positives = 390/678 (57%), Gaps = 5/678 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           L +   A   S    LGR  H  +++L       F    LV++Y+K+     A +     
Sbjct: 12  LGAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASD 71

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA--CAGMELKEL 215
            +P +VS+ A I+G   H     AL  F  M    + PN FT+ SA KA  CA      +
Sbjct: 72  PNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTV 131

Query: 216 GRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           G Q+H   ++   +  DP V    +DMY K G +  AR +F  MP +N+IAWN V++  +
Sbjct: 132 GPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAV 191

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
            +G  +E    +  +   G   +  ++     + A    + + +Q H   V   F+ D  
Sbjct: 192 IDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVS 251

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + N+++D YGKC     A  +F      + V+  SMI AYAQ G  E+AL +Y+  ++  
Sbjct: 252 VSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTG 311

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
             P  F+ SS+L  CA L     G+ +H   ++    ++ F  ++LV+MY KCG ++DA+
Sbjct: 312 EEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAE 371

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHA 513
           + F ++P+R +V+W+AMIGG A  G  + AL +F  M+  G   PNHITLV+V+ AC+  
Sbjct: 372 QVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRG 431

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           GL  +    F++M ++FG++P  EHYAC++D+LGRAG  + A E++  MP + + SVWGA
Sbjct: 432 GLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGA 491

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
           LLGA +++   E+G+ A+E LF ++P+ S  HVLLSN+ ASAG W     VR+ MK+  +
Sbjct: 492 LLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGI 551

Query: 634 KKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEE 693
           KKEPG SWI  K+ V+ F   D  H R+ EI A L ++   +  +GY+P  +  L+DVEE
Sbjct: 552 KKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEE 611

Query: 694 SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
            EKE  ++ HSEKLA+AFGLI  PP   IR+ KNLRICVDCH +F+F+S IV REIIVRD
Sbjct: 612 EEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRD 671

Query: 754 VNRFHHFRNGSCSCGGYW 771
            NRFH+F+   CSC  YW
Sbjct: 672 NNRFHYFKQFECSCKDYW 689



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 248/512 (48%), Gaps = 14/512 (2%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+   LV +Y+K      +     + P  +VVS+ +  S          A+  F  M+  
Sbjct: 46  FICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRV 105

Query: 91  GIRPNEFSLSSMIN--ACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNL 147
           G+RPN+F+  S     ACA    S +G +IH  +++ GY   D F + A +DMY K G L
Sbjct: 106 GLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCL 165

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
             A  +F+++ + ++++WNAV+   V+        K +  ++ +   PN+ +  +   AC
Sbjct: 166 GLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNAC 225

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           AG     LG Q H  ++      D  V   +VD Y KC    +AR +F  M  +N ++W 
Sbjct: 226 AGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWC 285

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I  + Q+G + +A +++      G       +S+VL + A    +   + +HA++V++
Sbjct: 286 SMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRS 345

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +++ ++ ++L+D YGKCG VEDA ++F +    +LV   +MI  YA  G  + AL ++
Sbjct: 346 CIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVF 405

Query: 388 LEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYA 445
             M +    +P+     +++ AC+     + G ++   +  +FG    T     +V++  
Sbjct: 406 DAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLG 465

Query: 446 KCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHI 501
           + G  + A      +P R  +S W A++G    HG+   G+ A +   + L+     NH+
Sbjct: 466 RAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFE-LDPQDSGNHV 524

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            L ++L +   AG  AEA    + M K  GI+
Sbjct: 525 LLSNMLAS---AGRWAEATDVRKEM-KNVGIK 552



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 233/518 (44%), Gaps = 60/518 (11%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           AC   +   +G Q+H + +  G+   D FV+ + + MY K G    +RRLF+ +P R+V+
Sbjct: 122 ACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVI 181

Query: 63  SWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +WN++ +   +    LE    +F      G+ PN  S+ +  NACAG+    LG + HG+
Sbjct: 182 AWNAVMTNAVIDGRPLETFKAYFGLREAGGM-PNVVSVCAFFNACAGAMFLSLGEQFHGF 240

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +  G+D D+  +NA+VD Y K      A AVF  +   + VSW ++I     H   + A
Sbjct: 241 VVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDA 300

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L ++   +++   P  F  +S L  CAG+     GR LH   ++  I ++  V   LVDM
Sbjct: 301 LAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDM 360

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQTT 300
           Y KCG +++A  +F  MPE+NL+ WN +I G+   G    A ++F  M R  G   +  T
Sbjct: 361 YGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHIT 420

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKIFKES 359
           L  V+ + +                +     D Y + +++ + +G    VE   + +  +
Sbjct: 421 LVNVITACS----------------RGGLTKDGYELFDTMRERFG----VEPRTEHY--A 458

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
             VDL+          + G+ E A ++   +Q   + P   V  +LL AC      E G+
Sbjct: 459 CVVDLL---------GRAGMEERAYEI---IQRMPMRPSISVWGALLGACKMHGKTELGR 506

Query: 420 QVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI--------VSWS 469
                + +   +    +GN   L NM A  G   +A     E+ + GI        ++W 
Sbjct: 507 IASEKLFE---LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWK 563

Query: 470 AMIGGL----AQHGRGKEALQMFG----QMLEDGVLPN 499
            ++        +H R  E   +      QM   G +P+
Sbjct: 564 NVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPD 601



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L  G  +H + V +  D++ FVA++LV MY KCG   D+ ++F  +PER+
Sbjct: 322 VLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERN 381

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V+WN++   Y H    + A+  F  M+ S G  PN  +L ++I AC+  G +  G ++ 
Sbjct: 382 LVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELF 441

Query: 120 -GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
                + G +        +VD+  + G  E A  + + +   P I  W A++  C +H  
Sbjct: 442 DTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGK 501

Query: 178 NDWALKLFQQMKSSEINPN 196
            +  L      K  E++P 
Sbjct: 502 TE--LGRIASEKLFELDPQ 518


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/713 (37%), Positives = 399/713 (55%), Gaps = 74/713 (10%)

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSWNAVIAGCVLHEHNDWALKLFQQM-K 189
           +A +LV  YA  G L  AV+ F  +     D V  NAVI+      H   A+ +F+ +  
Sbjct: 90  AATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 190 SSEINPNMFTYTSALKACAGMELKELGR--QLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           S  + P+ +++T+ L A   +    +    QL CS++K        V   LV +Y KC +
Sbjct: 150 SGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEA 209

Query: 248 MD---EARMIFHLMPEKNL-------------------------------IAWNIVISGH 273
           ++   +AR +   MP+K+                                + WN +ISG+
Sbjct: 210 LEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGY 269

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA----LSVKTAF 329
           + +G  +EA  LF  M  E V  D+ T ++VL + A+       K VH     L      
Sbjct: 270 VHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS-------------------- 369
           E+   + N+L+  Y KCG++  A +IF    + D+V+  +                    
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 370 -----------MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                      M++ Y   G  E+ALKL+  M+  ++ P  +  +  ++AC  L + + G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG 449

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H H+++ GF     AGN+L+ MYA+CG++ +A+  F  +P+   VSW+AMI  L QH
Sbjct: 450 KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQH 509

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+EAL++F +M+ +G+ P+ I+ ++VL ACNH+GLV E   +FESM++ FGI P ++H
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH 569

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y  +ID+LGRAG+  EA +L+ TMPF+   S+W A+L   R   ++E+G HAA+ LF + 
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+   T++LLSN Y++AG W + A+VR+ M+D  +KKEPG SWIE  +KV+ F VGD  H
Sbjct: 630 PQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKH 689

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             + ++Y  L+ V   + K GYVP  +  LHD+E  +KE +L+ HSE+LAV FGL+  PP
Sbjct: 690 PEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPP 749

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GAT+ V KNLRIC DCH    F+SK V REI+VRDV RFHHF++G CSCG YW
Sbjct: 750 GATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 185/369 (50%), Gaps = 40/369 (10%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D     ++VV Y + G+   +R +F+ +  +  V WN++ S YVH   + EA   F+ 
Sbjct: 225 DKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRR 284

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY----DSDMFSANALVDMYA 142
           MVL  +  +EF+ +S+++ACA +G    G+ +HG   +L      ++ +   NALV +Y+
Sbjct: 285 MVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYS 344

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND----------------W------ 180
           K GN+  A  +F +++  D+VSWN +++G V     D                W      
Sbjct: 345 KCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSG 404

Query: 181 ---------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    ALKLF +M++ ++ P  +TY  A+ AC  +   + G+QLH  L+++  +  
Sbjct: 405 YVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGS 464

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              G  L+ MYA+CG++ EA ++F +MP  + ++WN +IS   Q+G   EA  LF  M  
Sbjct: 465 NSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF---ESDDYIVNSLIDAYGKCGH 348
           EG+  D+ +  TVL +      +    Q    S+K  F     +D+    LID  G+ G 
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFQYFE-SMKRDFGIIPGEDHYTR-LIDLLGRAGR 582

Query: 349 VEDAVKIFK 357
           + +A  + K
Sbjct: 583 IGEARDLIK 591



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 231/530 (43%), Gaps = 78/530 (14%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWNSLFSCYVHCDFLEEAVCFF 84
           D     A SLV  YA  G    +   FDA+P+  R  V  N++ S Y        AV  F
Sbjct: 85  DPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVF 144

Query: 85  KEMVLSG-IRPNEFSLSSMINACAGSGDSLLGR---KIHGYSIKLGYDSDMFSANALVDM 140
           + ++ SG +RP+++S +++++A AG   ++  R   ++    +K G    +  +NALV +
Sbjct: 145 RSLLASGSLRPDDYSFTALLSA-AGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVAL 203

Query: 141 YAKV----------------------------------GNLEDAVAVFKDIEHPDIVSWN 166
           Y K                                   G++  A +VF++++    V WN
Sbjct: 204 YMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWN 263

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           A+I+G V       A +LF++M    +  + FT+TS L ACA       G+ +H  + ++
Sbjct: 264 AMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRL 323

Query: 227 EIKSDP----IVGVGLVDMYAKCGS-------------------------------MDEA 251
           +    P     V   LV +Y+KCG+                               +D+A
Sbjct: 324 QPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKA 383

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +F  MP KN ++W +++SG++  G   +A  LF  M  E V     T +  + +    
Sbjct: 384 VEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGEL 443

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            ++   KQ+H   V+  FE  +   N+LI  Y +CG V++A  +F     +D V+  +MI
Sbjct: 444 GSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMI 503

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGF 430
           +A  Q G G EAL+L+  M    I PD     ++L AC +    ++G Q    + + FG 
Sbjct: 504 SALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGI 563

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
           +        L+++  + G I +A      +P     S W A++ G    G
Sbjct: 564 IPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 159/318 (50%), Gaps = 38/318 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVF--TGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VL AC +      G  VHG +      F  ++   V N+LV +Y+KCGN   +RR+FD +
Sbjct: 300 VLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM 359

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSG--------------- 91
             + VVSWN++ S YV    L++AV  F+EM          ++SG               
Sbjct: 360 KSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFN 419

Query: 92  ------IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
                 ++P +++ +  I+AC   G    G+++HG+ ++LG++    + NAL+ MYA+ G
Sbjct: 420 RMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCG 479

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +++A  +F  + + D VSWNA+I+    H H   AL+LF +M +  I P+  ++ + L 
Sbjct: 480 AVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539

Query: 206 ACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
           AC    L + G Q   S+ +   I         L+D+  + G + EAR +   MP E   
Sbjct: 540 ACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTP 599

Query: 264 IAWNIVISGHLQNGGDME 281
             W  ++SG  +  GDME
Sbjct: 600 SIWEAILSG-CRTSGDME 616


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/631 (39%), Positives = 378/631 (59%), Gaps = 9/631 (1%)

Query: 150  AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
            A   +K ++  ++ SWN+VIA       +  AL+ F  ++   + P   ++   +K+C+ 
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 210  MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
            +     GR  H        ++D  V   L+DMY+KCG + +AR +F  +P +N+++W  +
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214

Query: 270  ISGHLQNGGDMEAASLFPWMYRE--------GVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
            I+G++QN     A  LF     E         V  D   + +VL + +     G+ + VH
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274

Query: 322  ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
               VK  F+    + N+L+DAY KCG    + K+F      D ++  SMI  YAQ GL  
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334

Query: 382  EALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
            EAL+++  M +   +  ++   S++L ACA+  A   GK +H  +IK     +   G S+
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 1394

Query: 441  VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            ++MY KCG ++ A + F  + ++ + SW+AM+ G   HGR KEAL +F +M+  GV PN+
Sbjct: 1395 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 1454

Query: 501  ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
            IT VSVL AC+HAGLV E  H F +M+ K+ I+P  EHY CM+D+ GRAG   EA  L+ 
Sbjct: 1455 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 1514

Query: 561  TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
             M  + +  VWG+LLGA RI+KNV++G+ AA+ LF ++P+    +VLLSN+YA AG W +
Sbjct: 1515 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 1574

Query: 621  VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
            V ++R  MK+ +L K PG S +E+K +V+ F VGD+ H   + IY  L++++  L K GY
Sbjct: 1575 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 1634

Query: 681  VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
            VP + + LHDV+E EKE +L  HSEKLAVAFG++ + PG TI + KNLR+C DCHT  + 
Sbjct: 1635 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 1694

Query: 741  ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISK+V R+ +VRD  RFHHF++G CSCG YW
Sbjct: 1695 ISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 195/383 (50%), Gaps = 31/383 (8%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           RQ+H  +I+  + +D ++   L+ +Y+  G +  A ++F+ +       WN++I  +  N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   +A  L+  M  +G+  D+ T   V+K+  +F +I + K VH   +K  F  D ++ 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 337 NSLIDAYGKCGH-------------------------------VEDAVKIFKESSAVDLV 365
           N+LID Y KCGH                               +++A +IF E  + ++V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           + T+MI  Y +    EEAL+L+  MQ   I P+ +   SL+ AC  +     G+ +H + 
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK       + G +L++MY+KCGSI DA   F  +P + + +W++MI  L  HG G+EAL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F +M    V P+ IT + VLCAC H   V E   +F  M + +GI P+ EHY CM ++
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 546 LGRAGKFQEAMELVDTMPFQANA 568
             R+    EA +    +   AN+
Sbjct: 404 YARSNNLDEAFKSTKEVGSLANS 426



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 23/444 (5%)

Query: 52   LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
             +  + + +V SWNS+ +         EA+  F  +   G+ P   S    I +C+   D
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157

Query: 112  SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
             + GR  H  +   G+++D+F ++AL+DMY+K G L+DA A+F +I   ++VSW ++I G
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217

Query: 172  CVLHEHNDWALKLFQQMKSSE--------INPNMFTYTSALKACAGMELKELGRQLHCSL 223
             V +E  D AL LF+     E        +  +     S L AC+ +  K +   +H  +
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277

Query: 224  IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
            +K        VG  L+D YAKCG    ++ +F  M EK+ I+WN +I+ + Q+G   EA 
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337

Query: 284  SLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             +F  M R  GV ++  TLS VL + A   A+   K +H   +K   E +  +  S+ID 
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 1397

Query: 343  YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
            Y KCG VE A K F      ++ + T+M+  Y   G  +EAL ++ +M    + P+    
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 1457

Query: 403  SSLLNACANLSAYEQG-----KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
             S+L AC++    E+G        H + I+ G          +V+++ + G +++A    
Sbjct: 1458 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLI 1513

Query: 458  SEI---PDRGIVSWSAMIGGLAQH 478
              +   PD   V W +++G    H
Sbjct: 1514 KRMKMKPD--FVVWGSLLGACRIH 1535



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 213/417 (51%), Gaps = 27/417 (6%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
             +K+C++  DL  G   H      GF++D FV+++L+ MY+KCG   D+R LFD IP R+
Sbjct: 1148 TIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRN 1207

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVL--------SGIRPNEFSLSSMINACAGSGDS 112
            VVSW S+ + YV  +  + A+  FK+ +         + +  +   + S+++AC+     
Sbjct: 1208 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 1267

Query: 113  LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             +   +HG+ +K G+D  +   N L+D YAK G    +  VF  +E  D +SWN++IA  
Sbjct: 1268 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 1327

Query: 173  VLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                 +  AL++F  M +   +  N  T ++ L ACA       G+ +H  +IKM+++ +
Sbjct: 1328 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN 1387

Query: 232  PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              VG  ++DMY KCG ++ A+  F  M EKN+ +W  +++G+  +G   EA  +F  M R
Sbjct: 1388 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR 1447

Query: 292  EGVGFDQTTLSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCG 347
             GV  +  T  +VL   A+    G+ ++     +A+  K   E        ++D +G+ G
Sbjct: 1448 AGVKPNYITFVSVL---AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAG 1504

Query: 348  HVEDAVKIFKE-SSAVDLVACTSMITA---YAQFGLGE-EALKLYLEMQDREINPDS 399
             + +A  + K      D V   S++ A   +    LGE  A KL+      E++PD+
Sbjct: 1505 CLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLF------ELDPDN 1555



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 34/336 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C + K L    Q+H  ++ +G  +D+ +   L+ +Y+  G    +  LF  I    
Sbjct: 33  LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +WN +          E+A+  +K MV  GI  ++F+   +I AC       LG+ +HG
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 121 YSIKLGYDSDMFSANALVDMYAKVG-------------------------------NLED 149
             IK G+  D+F  N L+D Y K G                               +L++
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F +I   ++VSW A+I G + ++  + AL+LF++M++  I PN +T  S +KAC  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           M +  LGR +H   IK  I+    +G  L+DMY+KCGS+ +A  +F  MP K+L  WN +
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           I+    +G   EA +LF  M R  V  D  T   VL
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 143/283 (50%), Gaps = 32/283 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           V+KACT+   + LG  VHG ++  GF  D FV N+L+  Y KCG                
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190

Query: 45  ---------------NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                          +  ++RR+FD IP ++VVSW ++ + Y+     EEA+  FK M  
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             I PNE+++ S+I AC   G   LGR IH Y+IK   +  ++   AL+DMY+K G+++D
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD 310

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A+ VF+ +    + +WN++I    +H     AL LF +M+   + P+  T+   L AC  
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370

Query: 210 MELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEA 251
           ++  + G      + +   I   P     + ++YA+  ++DEA
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 174/344 (50%), Gaps = 19/344 (5%)

Query: 247  SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            S + A   +  + + N+ +WN VI+   + G  +EA   F  + + G+   +++    +K
Sbjct: 1091 SSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 1150

Query: 307  SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            S ++   +   +  H  +    FE+D ++ ++LID Y KCG ++DA  +F E    ++V+
Sbjct: 1151 SCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS 1210

Query: 367  CTSMITAYAQFGLGEEALKLYLEMQDRE--------INPDSFVCSSLLNACANLSAYEQG 418
             TSMIT Y Q    + AL L+ +  + E        +  DS V  S+L+AC+ +S     
Sbjct: 1211 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGIT 1270

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            + VH  ++K GF      GN+L++ YAKCG    + + F  + ++  +SW++MI   AQ 
Sbjct: 1271 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 1330

Query: 479  GRGKEALQMFGQMLED-GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            G   EAL++F  M+   GV  N +TL +VL AC HAG +   K   + +     I+   E
Sbjct: 1331 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLE 1385

Query: 538  HYAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +  C    +ID+  + G+ + A +  D M  + N   W A++  
Sbjct: 1386 YNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAG 1428



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 23/255 (9%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC     L  G  +H  V+    + +  V  S++ MY KCG    +++ FD + E++
Sbjct: 1359 VLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN 1418

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V SW ++ + Y      +EA+  F +MV +G++PN  +  S++ AC+ +G  L+    H 
Sbjct: 1419 VKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG--LVEEGWHW 1476

Query: 121  Y-SIKLGYDSD--MFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            + ++K  YD +  +     +VD++ + G L +A  + K ++  PD V W +++  C +H+
Sbjct: 1477 FNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHK 1536

Query: 177  HNDW----ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            + D     A KLF      E++P+   Y   L         + GR      ++M +K+  
Sbjct: 1537 NVDLGEIAAQKLF------ELDPDNCGYYVLLSNLYA----DAGRWADVERMRMLMKNRQ 1586

Query: 233  IV---GVGLVDMYAK 244
            +V   G  LV++  +
Sbjct: 1587 LVKPPGFSLVELKGR 1601


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 404/716 (56%), Gaps = 36/716 (5%)

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGN 146
           L    P    L S++  C  S D L  +++H  +IK G +++    N ++      + G+
Sbjct: 11  LKSFSPPTHPLISLLETCE-SMDQL--QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD 67

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
            + A  +F +I  P++  WN +I G    +     + L+ +M    + P+ +T+    K 
Sbjct: 68  FQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 127

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
                  E GRQLH  ++K  ++ +  V   LV MY  CG +D AR +F + P+ ++I W
Sbjct: 128 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 187

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N++IS + + G   E+  LF  M  + V     TL  VL + +  + +   K+VH+    
Sbjct: 188 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 247

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG-------- 378
              ES+  + N++ID Y  CG ++ A+ IF+  +  D+++ T++++ +   G        
Sbjct: 248 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNY 307

Query: 379 -----------------------LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
                                    +EAL+L+  MQ   + PD F   S+L ACA+L A 
Sbjct: 308 FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 367

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E G+ +  +I +    +D F  N+L++MY KCG +D A+  F E+  R   +W+AMI GL
Sbjct: 368 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGL 427

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           A +G G++AL MF  ML+  +LP+ IT + VL AC H GLV + + +F  M  + GI+P 
Sbjct: 428 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN 487

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
             HY C++D+L RAG+ +EA E+++ MP +AN+ VWGALL   R+Y+  ++ +   + + 
Sbjct: 488 IAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL 547

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP+  + +VLL NIYA+   W+++ ++R+ M D  +KK PG S IE+  +V+ F  GD
Sbjct: 548 ELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGD 607

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           RSH ++K I AKLD+++  L  AGY P +     D+ E +KE  ++ HSEKLA+AFGLI 
Sbjct: 608 RSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLIN 667

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +PPG TIR+ KNLR+C+DCH   + +SK+ +RE+IVRD  RFHHF++G CSC  YW
Sbjct: 668 SPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 274/592 (46%), Gaps = 52/592 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           +L+ C S   L    QVH   +  G +++  + N ++      + G+F  +RRLFD IPE
Sbjct: 24  LLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            ++  WN++   Y   DF +  V  + EM+  G++P+ ++   +            GR++
Sbjct: 81  PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+ +K G   ++F   ALV MY   G L+ A  VF      D+++WN +I+        
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 200

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + + +LF  M+  ++ P   T    L AC+ ++    G+++H  +   +++S+ ++   +
Sbjct: 201 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAM 260

Query: 239 VDMYAKCGSMDE-------------------------------ARMIFHLMPEKNLIAWN 267
           +DMYA CG MD                                AR  F  MPEK+ ++W 
Sbjct: 261 IDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWT 320

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G++++    EA  LF  M    V  D+ T+ +VL + A   A+ + + +     + 
Sbjct: 321 AMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRN 380

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             ++D ++ N+LID Y KCG V+ A  IF+E S  D    T+MI   A  G GE+AL ++
Sbjct: 381 KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMF 440

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
             M    I PD      +L+AC +    ++G++  + +  + G   +      LV++ A+
Sbjct: 441 SNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLAR 500

Query: 447 CGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLE----DGVLPNHI 501
            G + +A      +P +   + W A++ G   +     A  +  Q+LE    +G +  ++
Sbjct: 501 AGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAV--YV 558

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-MIDILGRAGKF 552
            L ++  AC     + E +     M+K     P      C +I++ GR  +F
Sbjct: 559 LLCNIYAACKRWNDLRELRQMM--MDKGIKKTP-----GCSLIEMNGRVHEF 603


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/631 (39%), Positives = 378/631 (59%), Gaps = 9/631 (1%)

Query: 150  AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
            A   +K ++  ++ SWN+VIA       +  AL+ F  ++   + P   ++   +K+C+ 
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 210  MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
            +     GR  H        ++D  V   L+DMY+KCG + +AR +F  +P +N+++W  +
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 2087

Query: 270  ISGHLQNGGDMEAASLFPWMYRE--------GVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
            I+G++QN     A  LF     E         V  D   + +VL + +     G+ + VH
Sbjct: 2088 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 2147

Query: 322  ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
               VK  F+    + N+L+DAY KCG    + K+F      D ++  SMI  YAQ GL  
Sbjct: 2148 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 2207

Query: 382  EALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
            EAL+++  M +   +  ++   S++L ACA+  A   GK +H  +IK     +   G S+
Sbjct: 2208 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 2267

Query: 441  VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            ++MY KCG ++ A + F  + ++ + SW+AM+ G   HGR KEAL +F +M+  GV PN+
Sbjct: 2268 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 2327

Query: 501  ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
            IT VSVL AC+HAGLV E  H F +M+ K+ I+P  EHY CM+D+ GRAG   EA  L+ 
Sbjct: 2328 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 2387

Query: 561  TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
             M  + +  VWG+LLGA RI+KNV++G+ AA+ LF ++P+    +VLLSN+YA AG W +
Sbjct: 2388 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 2447

Query: 621  VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
            V ++R  MK+ +L K PG S +E+K +V+ F VGD+ H   + IY  L++++  L K GY
Sbjct: 2448 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 2507

Query: 681  VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
            VP + + LHDV+E EKE +L  HSEKLAVAFG++ + PG TI + KNLR+C DCHT  + 
Sbjct: 2508 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 2567

Query: 741  ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISK+V R+ +VRD  RFHHF++G CSCG YW
Sbjct: 2568 ISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 195/383 (50%), Gaps = 31/383 (8%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           RQ+H  +I+  + +D ++   L+ +Y+  G +  A ++F+ +       WN++I  +  N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   +A  L+  M  +G+  D+ T   V+K+  +F +I + K VH   +K  F  D ++ 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 337 NSLIDAYGKCGH-------------------------------VEDAVKIFKESSAVDLV 365
           N+LID Y KCGH                               +++A +IF E  + ++V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           + T+MI  Y +    EEAL+L+  MQ   I P+ +   SL+ AC  +     G+ +H + 
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK       + G +L++MY+KCGSI DA   F  +P + + +W++MI  L  HG G+EAL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F +M    V P+ IT + VLCAC H   V E   +F  M + +GI P+ EHY CM ++
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 546 LGRAGKFQEAMELVDTMPFQANA 568
             R+    EA +    +   AN+
Sbjct: 404 YARSNNLDEAFKSTKEVGSLANS 426



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 23/444 (5%)

Query: 52   LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
             +  + + +V SWNS+ +         EA+  F  +   G+ P   S    I +C+   D
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030

Query: 112  SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
             + GR  H  +   G+++D+F ++AL+DMY+K G L+DA A+F +I   ++VSW ++I G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090

Query: 172  CVLHEHNDWALKLFQQMKSSE--------INPNMFTYTSALKACAGMELKELGRQLHCSL 223
             V +E  D AL LF+     E        +  +     S L AC+ +  K +   +H  +
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150

Query: 224  IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
            +K        VG  L+D YAKCG    ++ +F  M EK+ I+WN +I+ + Q+G   EA 
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210

Query: 284  SLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             +F  M R  GV ++  TLS VL + A   A+   K +H   +K   E +  +  S+ID 
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 2270

Query: 343  YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
            Y KCG VE A K F      ++ + T+M+  Y   G  +EAL ++ +M    + P+    
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330

Query: 403  SSLLNACANLSAYEQG-----KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
             S+L AC++    E+G        H + I+ G          +V+++ + G +++A    
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLI 2386

Query: 458  SEI---PDRGIVSWSAMIGGLAQH 478
              +   PD   V W +++G    H
Sbjct: 2387 KRMKMKPD--FVVWGSLLGACRIH 2408



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 213/417 (51%), Gaps = 27/417 (6%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
             +K+C++  DL  G   H      GF++D FV+++L+ MY+KCG   D+R LFD IP R+
Sbjct: 2021 TIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRN 2080

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVL--------SGIRPNEFSLSSMINACAGSGDS 112
            VVSW S+ + YV  +  + A+  FK+ +         + +  +   + S+++AC+     
Sbjct: 2081 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 2140

Query: 113  LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
             +   +HG+ +K G+D  +   N L+D YAK G    +  VF  +E  D +SWN++IA  
Sbjct: 2141 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 2200

Query: 173  VLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                 +  AL++F  M +   +  N  T ++ L ACA       G+ +H  +IKM+++ +
Sbjct: 2201 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN 2260

Query: 232  PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              VG  ++DMY KCG ++ A+  F  M EKN+ +W  +++G+  +G   EA  +F  M R
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR 2320

Query: 292  EGVGFDQTTLSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCG 347
             GV  +  T  +VL   A+    G+ ++     +A+  K   E        ++D +G+ G
Sbjct: 2321 AGVKPNYITFVSVL---AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAG 2377

Query: 348  HVEDAVKIFKE-SSAVDLVACTSMITA---YAQFGLGE-EALKLYLEMQDREINPDS 399
             + +A  + K      D V   S++ A   +    LGE  A KL+      E++PD+
Sbjct: 2378 CLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLF------ELDPDN 2428



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 34/336 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C + K L    Q+H  ++ +G  +D+ +   L+ +Y+  G    +  LF  I    
Sbjct: 33  LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +WN +          E+A+  +K MV  GI  ++F+   +I AC       LG+ +HG
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 121 YSIKLGYDSDMFSANALVDMYAKVG-------------------------------NLED 149
             IK G+  D+F  N L+D Y K G                               +L++
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F +I   ++VSW A+I G + ++  + AL+LF++M++  I PN +T  S +KAC  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           M +  LGR +H   IK  I+    +G  L+DMY+KCGS+ +A  +F  MP K+L  WN +
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           I+    +G   EA +LF  M R  V  D  T   VL
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 144/287 (50%), Gaps = 40/287 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           V+KACT+   + LG  VHG ++  GF  D FV N+L+  Y KCG                
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190

Query: 45  ---------------NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                          +  ++RR+FD IP ++VVSW ++ + Y+     EEA+  FK M  
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             I PNE+++ S+I AC   G   LGR IH Y+IK   +  ++   AL+DMY+K G+++D
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD 310

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A+ VF+ +    + +WN++I    +H     AL LF +M+   + P+  T+   L AC  
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVG-----LVDMYAKCGSMDEA 251
           ++  + G    C+      +   I  +      + ++YA+  ++DEA
Sbjct: 371 IKNVKEG----CAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 14/192 (7%)

Query: 344  GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP--DSFV 401
            G+  H   A   +K     ++ +  S+I   A+ G   EAL+ +  ++   + P   SF 
Sbjct: 1960 GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFP 2019

Query: 402  CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            C+  + +C+ L     G+  H     FGF +D F  ++L++MY+KCG + DA   F EIP
Sbjct: 2020 CT--IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077

Query: 462  DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED--------GVLPNHITLVSVLCACNHA 513
             R +VSW++MI G  Q+ +   AL +F   LE+         V  + + +VSVL AC+  
Sbjct: 2078 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137

Query: 514  G--LVAEAKHHF 523
                + E  H F
Sbjct: 2138 SGKGITEGVHGF 2149



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 23/255 (9%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC     L  G  +H  V+    + +  V  S++ MY KCG    +++ FD + E++
Sbjct: 2232 VLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN 2291

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V SW ++ + Y      +EA+  F +MV +G++PN  +  S++ AC+ +G  L+    H 
Sbjct: 2292 VKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG--LVEEGWHW 2349

Query: 121  Y-SIKLGYDSD--MFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            + ++K  YD +  +     +VD++ + G L +A  + K ++  PD V W +++  C +H+
Sbjct: 2350 FNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHK 2409

Query: 177  HNDW----ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            + D     A KLF      E++P+   Y   L         + GR      ++M +K+  
Sbjct: 2410 NVDLGEIAAQKLF------ELDPDNCGYYVLLSNLYA----DAGRWADVERMRMLMKNRQ 2459

Query: 233  IV---GVGLVDMYAK 244
            +V   G  LV++  +
Sbjct: 2460 LVKPPGFSLVELKGR 2474


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/713 (37%), Positives = 407/713 (57%), Gaps = 43/713 (6%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS----DMFSANALVDMYAKVGNLED 149
           P  F  +++++A A    S+  R++        +D     ++FS N L+  Y+K G+L +
Sbjct: 36  PETFLHNNIVHAYALIRSSIYARRV--------FDGIPQPNLFSWNNLLLAYSKSGHLSE 87

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACA 208
               F+ +   D V+WN +I G  L      A+K +  M K    N    T  + LK  +
Sbjct: 88  MERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSS 147

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI---- 264
                 LG+Q+H  +IK+  +S  +VG  L+DMY+K G + +A+ +F+ + ++N +    
Sbjct: 148 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNT 207

Query: 265 --------------------------AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
                                     +W+ +I G  QNG + EA   F  M  EG+  DQ
Sbjct: 208 LMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQ 267

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
               +VL +     AI   +Q+HA  ++T  +   Y+ ++LID Y KC  +  A  +F  
Sbjct: 268 YPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDR 327

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               ++V+ T+M+  Y Q G   EA+K++L+MQ   I+PD +     ++ACAN+S+ E+G
Sbjct: 328 MKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEG 387

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            Q H   I  G +      NSLV +Y KCG IDD+ R F+E+  R  VSW+AM+   AQ 
Sbjct: 388 SQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQF 447

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GR  EA+Q+F +M++ G+ P+ +TL  V+ AC+ AGLV + + +FE M  ++GI P   H
Sbjct: 448 GRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGH 507

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y+CMID+  R+G+ +EAM  ++ MPF+ +A  W  LL A R   N+E+G+ AAE L  ++
Sbjct: 508 YSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 567

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P   + + LLS+IYAS G WD VA++RR MK+  ++KEPG SWI+ K K+++F+  D S 
Sbjct: 568 PHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESS 627

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             S +IYAKL+E+   +   GY P      HDVEE+ K ++L  HSE+LA+AFGLI  P 
Sbjct: 628 PYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPS 687

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  IRV KNLR+CVDCH + + IS +  REI+VRD  RFH F++G+CSCG +W
Sbjct: 688 GLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 264/526 (50%), Gaps = 41/526 (7%)

Query: 22  VFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEA 80
           VF G    + F  N+L++ Y+K G+  +  R F+ +P+R  V+WN L   Y     +  A
Sbjct: 60  VFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 119

Query: 81  VCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
           V  +  M+          +L +M+   + +G   LG++IHG  IKLG++S +   + L+D
Sbjct: 120 VKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLD 179

Query: 140 MYAKVG-------------------------------NLEDAVAVFKDIEHPDIVSWNAV 168
           MY+KVG                                +EDA+ +F+ +E  D VSW+A+
Sbjct: 180 MYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAM 238

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           I G   +     A++ F++MK   +  + + + S L AC G+     GRQ+H  +I+  +
Sbjct: 239 IKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNL 298

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
           +    VG  L+DMY KC  +  A+ +F  M +KN+++W  ++ G+ Q G   EA  +F  
Sbjct: 299 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLD 358

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M R G+  D  TL   + + A+  ++    Q H  ++         + NSL+  YGKCG 
Sbjct: 359 MQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGD 418

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           ++D+ ++F E +  D V+ T+M++AYAQFG   EA++L+ +M    + PD    + +++A
Sbjct: 419 IDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISA 478

Query: 409 CANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIV 466
           C+     E+G++   + I ++G +      + +++++++ G I++A    + +P R   +
Sbjct: 479 CSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAI 538

Query: 467 SWSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
            W+ ++      G    GK A +   ++  D   P   TL+S + A
Sbjct: 539 GWTTLLSACRNKGNLEIGKWAAESLIEL--DPHHPAGYTLLSSIYA 582



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 202/452 (44%), Gaps = 69/452 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK  +S   + LG Q+HG V+  GF+S   V + L+ MY+K G   D++++F  + +R+
Sbjct: 142 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRN 201

Query: 61  VVSWNSLFSCYVHCDFLE------------------------------EAVCFFKEMVLS 90
            V +N+L    + C  +E                              EA+  F+EM + 
Sbjct: 202 TVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIE 261

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G++ +++   S++ AC G G    GR+IH   I+      ++  +AL+DMY K   L  A
Sbjct: 262 GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYA 321

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF  ++  ++VSW A++ G         A+K+F  M+ S I+P+ +T   A+ ACA +
Sbjct: 322 KTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI 381

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
              E G Q H   I   +     V   LV +Y KCG +D++  +F+ M  ++ ++W  ++
Sbjct: 382 SSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMV 441

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S + Q G  +EA  LF  M + G+  D  TL+ V               + A S     E
Sbjct: 442 SAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGV---------------ISACSRAGLVE 486

Query: 331 SDDYIVNSLIDAYG---KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
                   +I+ YG     GH    + +F  S  +                  EEA+   
Sbjct: 487 KGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRI------------------EEAMGFI 528

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
             M  R   PD+   ++LL+AC N    E GK
Sbjct: 529 NGMPFR---PDAIGWTTLLSACRNKGNLEIGK 557



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 12/235 (5%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S+ +  C  L A    K +H +II+     +TF  N++V+ YA   S   A R F  IP 
Sbjct: 7   SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKH 521
             + SW+ ++   ++ G   E  + F ++ + DGV  N      ++   + +GLV  A  
Sbjct: 67  PNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWN-----VLIEGYSLSGLVGAAVK 121

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL---VDTMPFQANASVWGALLGAA 578
            + +M K F     +     M+ +    G      ++   V  + F++   V   LL   
Sbjct: 122 AYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL--- 178

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
            +Y  V     A ++ + ++   +  +  L     + GM ++  ++ R M+ + +
Sbjct: 179 DMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSV 233


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/709 (36%), Positives = 404/709 (56%), Gaps = 35/709 (4%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  F  +++++A A    S   R++     +     ++FS N L+  Y+K G + +  + 
Sbjct: 39  PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEMEST 94

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMEL 212
           F+ +   D V+WN +I G  L      A+K +  M +    N    T  + LK  +    
Sbjct: 95  FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI-------- 264
             LG+Q+H  +IK+  +S  +VG  L+ MYA  G + +A+ +F+ + ++N +        
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214

Query: 265 ----------------------AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
                                 +W  +I G  QNG   EA   F  M  +G+  DQ    
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           +VL +     AI   KQ+HA  ++T F+   Y+ ++LID Y KC  +  A  +F      
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           ++V+ T+M+  Y Q G  EEA+K++L+MQ   I+PD +     ++ACAN+S+ E+G Q H
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
              I  G +      NSLV +Y KCG IDD+ R F+E+  R  VSW+AM+   AQ GR  
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           E +Q+F +M++ G+ P+ +TL  V+ AC+ AGLV + + +F+ M  ++GI P   HY+CM
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           ID+  R+G+ +EAM  ++ MPF  +A  W  LL A R   N+E+G+ AAE L  ++P   
Sbjct: 515 IDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 574

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
           + + LLS+IYAS G WD+VA++RR M++  +KKEPG SWI+ K K+++F+  D S     
Sbjct: 575 AGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLD 634

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           +IYAKL+E+++ +   GY P      HDVEE+ K ++L +HSE+LA+AFGLI  P G  I
Sbjct: 635 QIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPI 694

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RV KNLR+CVDCH + + IS +  REI+VRD  RFH F++G+CSCG +W
Sbjct: 695 RVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 253/516 (49%), Gaps = 40/516 (7%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  N+L++ Y+K G   +    F+ +P+R  V+WN L   Y     +  AV  +  M+  
Sbjct: 73  FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132

Query: 91  -GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV----- 144
                   +L +M+   + +G   LG++IHG  IKLG++S +   + L+ MYA V     
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192

Query: 145 --------------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
                                     G +EDA+ +F+ +E  D VSW A+I G   +   
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLA 251

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A++ F++MK   +  + + + S L AC G+     G+Q+H  +I+   +    VG  L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY KC  +  A+ +F  M +KN+++W  ++ G+ Q G   EA  +F  M R G+  D 
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL   + + A+  ++    Q H  ++ +       + NSL+  YGKCG ++D+ ++F E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  D V+ T+M++AYAQFG   E ++L+ +M    + PD    + +++AC+     E+G
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491

Query: 419 KQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           ++   +   ++G +      + +++++++ G +++A R  + +P     + W+ ++    
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551

Query: 477 QHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
             G    GK A +   ++  D   P   TL+S + A
Sbjct: 552 NKGNLEIGKWAAESLIEL--DPHHPAGYTLLSSIYA 585



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 206/454 (45%), Gaps = 73/454 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK  +S   + LG Q+HG V+  GF+S   V + L+ MYA  G   D++++F  + +R+
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204

Query: 61  VVSWNSLFSCYVHCDFLE------------------------------EAVCFFKEMVLS 90
            V +NSL    + C  +E                              EA+  F+EM + 
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G++ +++   S++ AC G G    G++IH   I+  +   ++  +AL+DMY K   L  A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF  ++  ++VSW A++ G       + A+K+F  M+ S I+P+ +T   A+ ACA +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
              E G Q H   I   +     V   LV +Y KCG +D++  +F+ M  ++ ++W  ++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S + Q G  +E   LF  M + G+  D  TL+ V                          
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV-------------------------- 478

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVAC----TSMITAYAQFGLGEEALK 385
                    I A  + G VE   + FK  +S   +V      + MI  +++ G  EEA++
Sbjct: 479 ---------ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               +      PD+   ++LL+AC N    E GK
Sbjct: 530 F---INGMPFPPDAIGWTTLLSACRNKGNLEIGK 560



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 15/235 (6%)

Query: 406 LNACANLSAYEQG---KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           +  C  L A  Q    K +H +II+     +TF  N++V+ YA   S   A R F  IP 
Sbjct: 10  IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKH 521
             + SW+ ++   ++ G   E    F ++ + DGV  N      ++   + +GLV  A  
Sbjct: 70  PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWN-----VLIEGYSLSGLVGAAVK 124

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL---VDTMPFQANASVWGALLGAA 578
            + +M + F     +     M+ +    G      ++   V  + F++   V   LL   
Sbjct: 125 AYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL--- 181

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
            +Y NV     A ++ + ++   +  +  L     + GM ++  ++ R M+ + +
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/783 (35%), Positives = 447/783 (57%), Gaps = 19/783 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK--CGNFIDSRRLFDAIPER 59
           L++C S   L     VHG +         F+ N+L+  Y +   G+   +RRL D +P R
Sbjct: 20  LRSCAS---LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76

Query: 60  SVVSWNSLFSCYVHCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           + VS+N L   Y      EE++  F      + ++ + F+ ++ + AC+ +G    G+ +
Sbjct: 77  NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++  G    +F +N+LV MYA+ G++ +A  VF   E  D VSWN++++G +    +
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAH 196

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGME--LKELGRQLHCSLIKMEIKSDPIVGV 236
           +  L++F  M+   +  N F   S +K C+G +  ++ +   +H  ++K  + +D  +  
Sbjct: 197 EEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLAS 256

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM------EAASLFPWMY 290
            +VDMYAK G++ EA  +F  + + N++ +N +I+G  ++   +      EA SL+  + 
Sbjct: 257 AMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQ 316

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
             G+   + T S+V+++      I   KQ+H   +K  F+ DD+I ++LID Y     +E
Sbjct: 317 SRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACME 376

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           D  + F+     D+V  T+MI+   Q  L E AL L+ E+    + PD F  SS++NACA
Sbjct: 377 DGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACA 436

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +L+    G+Q+     K GF   T  GNS ++MYA+ G+++ A + F E+    +VSWSA
Sbjct: 437 SLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSA 496

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           +I   AQHG  ++ALQ F +M+   V+PN IT + VL AC+H GLV E   ++E M+ ++
Sbjct: 497 IISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEY 556

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           G+ P  +H  C++D+LGRAG+  +A   +    F     VW +LLG+ RI++++E GQ  
Sbjct: 557 GLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLV 616

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           A+ +  ++P  S  +V L N+Y  AG     +K+R  MK+  +KKEPG+SWIE++  +++
Sbjct: 617 ADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHS 676

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD-VEESEKEQ-LLYHHSEKLA 708
           F  GD+SH     IY KL E   +L+K   +   +T   + VE + +EQ  +  HSEKLA
Sbjct: 677 FVAGDKSHPECNAIYTKLAE---MLSKIDKLTTTDTSCIEWVETTGREQNWMNCHSEKLA 733

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           VA G+I  P  A IRV KNLR+C DCH++ + ISK   REII+RDV RFHHFR+GSCSCG
Sbjct: 734 VALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCG 793

Query: 769 GYW 771
            YW
Sbjct: 794 DYW 796



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 155/292 (53%), Gaps = 13/292 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC    D+  G Q+HG V+   F  D+F+ ++L+ +Y       D  R F ++P++ 
Sbjct: 330 VIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQD 389

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W ++ S  V  +  E A+  F E++  G++P+ F++SS++NACA       G ++  
Sbjct: 390 VVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQC 449

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++ K G+D      N+ + MYA+ GN+E A+  F+++E  D+VSW+A+I+    H     
Sbjct: 450 FATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQ 509

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           AL+ F +M  +++ PN  T+   L AC+   L + G + +  ++KME    P V     +
Sbjct: 510 ALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYY-EIMKMEYGLCPTVKHCTCV 568

Query: 239 VDMYAKCGSMDEARM-----IFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
           VD+  + G + +A       IFH  P    + W  ++ G  +   DME   L
Sbjct: 569 VDLLGRAGRLADAEAFIRDSIFHDEP----VVWQSLL-GSCRIHRDMERGQL 615


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 404/716 (56%), Gaps = 36/716 (5%)

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGN 146
           L    P    L S++  C  S D L  +++H  +IK G +++    N ++      + G+
Sbjct: 32  LKSFSPPTHPLISLLETCE-SMDQL--QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD 88

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
            + A  +F +I  P++  WN +I G    +     + L+ +M    + P+ +T+    K 
Sbjct: 89  FQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 148

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
                  E GRQLH  ++K  ++ +  V   LV MY  CG +D AR +F + P+ ++I W
Sbjct: 149 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 208

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N++IS + + G   E+  LF  M  + V     TL  VL + +  + +   K+VH+    
Sbjct: 209 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 268

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG-------- 378
              ES+  + N++ID Y  CG ++ A+ IF+  +  D+++ T++++ +   G        
Sbjct: 269 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNY 328

Query: 379 -----------------------LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
                                    +EAL+L+  MQ   + PD F   S+L ACA+L A 
Sbjct: 329 FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 388

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E G+ +  +I +    +D F  N+L++MY KCG +D A+  F E+  R   +W+AMI GL
Sbjct: 389 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGL 448

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           A +G G++AL MF  ML+  +LP+ IT + VL AC H GLV + + +F  M  + GI+P 
Sbjct: 449 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN 508

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
             HY C++D+L RAG+ +EA E+++ MP +AN+ VWGALL   R+Y+  ++ +   + + 
Sbjct: 509 IAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL 568

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP+  + +VLL NIYA+   W+++ ++R+ M D  +KK PG S IE+  +V+ F  GD
Sbjct: 569 ELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGD 628

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           RSH ++K I AKLD+++  L  AGY P +     D+ E +KE  ++ HSEKLA+AFGLI 
Sbjct: 629 RSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLIN 688

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +PPG TIR+ KNLR+C+DCH   + +SK+ +RE+IVRD  RFHHF++G CSC  YW
Sbjct: 689 SPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 274/592 (46%), Gaps = 52/592 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           +L+ C S   L    QVH   +  G +++  + N ++      + G+F  +RRLFD IPE
Sbjct: 45  LLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            ++  WN++   Y   DF +  V  + EM+  G++P+ ++   +            GR++
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 161

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+ +K G   ++F   ALV MY   G L+ A  VF      D+++WN +I+        
Sbjct: 162 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 221

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + + +LF  M+  ++ P   T    L AC+ ++    G+++H  +   +++S+ ++   +
Sbjct: 222 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAM 281

Query: 239 VDMYAKCGSMDE-------------------------------ARMIFHLMPEKNLIAWN 267
           +DMYA CG MD                                AR  F  MPEK+ ++W 
Sbjct: 282 IDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWT 341

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G++++    EA  LF  M    V  D+ T+ +VL + A   A+ + + +     + 
Sbjct: 342 AMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRN 401

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             ++D ++ N+LID Y KCG V+ A  IF+E S  D    T+MI   A  G GE+AL ++
Sbjct: 402 KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMF 461

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
             M    I PD      +L+AC +    ++G++  + +  + G   +      LV++ A+
Sbjct: 462 SNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLAR 521

Query: 447 CGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLE----DGVLPNHI 501
            G + +A      +P +   + W A++ G   +     A  +  Q+LE    +G +  ++
Sbjct: 522 AGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAV--YV 579

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-MIDILGRAGKF 552
            L ++  AC     + E +     M+K     P      C +I++ GR  +F
Sbjct: 580 LLCNIYAACKRWNDLRELRQMM--MDKGIKKXP-----GCSLIEMNGRVHEF 624


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/692 (37%), Positives = 412/692 (59%), Gaps = 15/692 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA--NSLVVMYAKCGNFIDSRRLFDAIPE 58
           VL+ C  K  +     VHG+V+ + F+  + +   N    +Y+KC  F  +  +FD +P+
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+V SW  +           +   FF EM+ SGI P++F+ S++I +C G     LG+ +
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +  G+ + +F + +L++MYAK+G++ED+  VF  +   + VSWNA+I+GC  +  +
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A  LF +MK+    PNM+T  S  KA   +    +G+++     ++ I+ + +VG  L
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 309

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLI------AWNIVISGHLQNGGDMEAASLFPWMYRE 292
           +DMY+KCGS+ +AR +F    + N I       WN +ISG+ Q+G   EA  L+  M + 
Sbjct: 310 IDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQN 365

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI-DAYGKCGHVED 351
           G+  D  T  +V  ++A+ +++   + VH + +K   +     VN+ I DAY KCG +ED
Sbjct: 366 GITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLED 425

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
             K+F      D+V+ T+++TAY+Q  LGEEAL  +  M++    P+ F  SS+L +CA+
Sbjct: 426 VRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCAS 485

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L   E G+QVH  + K G  ++    ++L++MYAKCGSI +A + F +I +  IVSW+A+
Sbjct: 486 LCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAI 545

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G AQHG  ++ALQ+F +M   G+  N +TL+ VL AC+H G+V E   +F+ ME  +G
Sbjct: 546 ISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYG 605

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           + P  EHYAC+ID+LGR G+  +AME +  MP + N  VW  LLG  R++ NVE+G+ AA
Sbjct: 606 VVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAA 665

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             + +I PE S+T+VLLSN Y   G +++   +R  MKD  +KKEPG SWI VK +V+ F
Sbjct: 666 RKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKF 725

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
             GD+ H + KEIY KL+E+ + +     VPM
Sbjct: 726 YSGDQQHPQKKEIYVKLEELREKIK--AMVPM 755



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 141/312 (45%), Gaps = 14/312 (4%)

Query: 292 EGVGFDQTTLST-------VLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDA 342
           E +G  +T   T       VL+  A   +I   K VH L +K+ FE  D +V  N     
Sbjct: 51  ESIGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHV 110

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y KC     A  +F E    ++ + T MI    + GL  +  K + EM +  I PD F  
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S+++ +C  L + E GK VH  I+  GF +  F   SL+NMYAK GSI+D+   F+ + +
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
              VSW+AMI G   +G   EA  +F +M      PN  TLVSV  A      V   K  
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK-E 289

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV-WGALLGAARIY 581
            ++   + GI+        +ID+  + G   +A  + DT       +  W A++     Y
Sbjct: 290 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG---Y 346

Query: 582 KNVEVGQHAAEM 593
                 Q A E+
Sbjct: 347 SQSGCSQEALEL 358


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/612 (42%), Positives = 382/612 (62%), Gaps = 4/612 (0%)

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           VSW  +++G   +  +  AL  F  M+ + + P  F  +SA +A A +     G QLHC 
Sbjct: 7   VSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCV 66

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
            +++   ++  V   L DMY+KCG + EA  +F  MP+K+ +AW  +I G+ +NG  +EA
Sbjct: 67  GVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG-SLEA 125

Query: 283 ASL-FPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           A L F  M REG VG DQ    +VL +    +   + K +H    K  FE +  + N+LI
Sbjct: 126 AVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALI 185

Query: 341 DAYGKCGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           D Y K   VE A ++ K +    ++V+ TSMI  Y +    EEAL +Y+E++ + + P+ 
Sbjct: 186 DMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 245

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F  SS++  CA  +  EQG Q+H  +IK   + D+F G++LV+MY KCG I  + + F+E
Sbjct: 246 FTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 305

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           I  R  ++W+A+I   AQHG G+EA+Q F +M+  G+ PNHI  VS+L AC+HAGLV E 
Sbjct: 306 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 365

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
             +F SM++  GI+P +EHY+C+ID  GRAG+  EA + +  MP + NA  W +LLGA R
Sbjct: 366 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACR 425

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           +  + E+G+ AA+ L  +EP  +  HV LS IYAS G W++V  VR+ M+D+++KK PG 
Sbjct: 426 MRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGF 485

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           SW++   K + F   D SH + K+IY KL+E++  + + GY+P       ++E+  KE++
Sbjct: 486 SWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERI 545

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
           L +HSE++AVAF LI+ P    I VKKNLRIC+DCHT+F+FI K+  R+IIVRD +RFHH
Sbjct: 546 LRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHH 605

Query: 760 FRNGSCSCGGYW 771
           F NG CSCG YW
Sbjct: 606 FVNGRCSCGDYW 617



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 213/440 (48%), Gaps = 38/440 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H + V  GFD++ FVA++L  MY+KCG   ++ R+FD +P++  V+W ++   Y    
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 76  FLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
            LE AV  F++M   G +  ++    S+++A  G  D  L + IH    K G++ ++   
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 181

Query: 135 NALVDMYAKVGNLEDAVAVFK-DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           NAL+DMYAK  ++E A  V K D    ++VS  ++I G +  +  + AL ++ +++   +
Sbjct: 182 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 241

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            PN FT++S +K CA   L E G QLH  +IK ++  D  VG  LVDMY KCG +  +  
Sbjct: 242 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 301

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F+ +  +  IAWN VI+   Q+G   EA   F  M   G+  +     ++L + +    
Sbjct: 302 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 361

Query: 314 IGV-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +    K  +++      E  +   + +ID YG+ G +++A K   E              
Sbjct: 362 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP------------ 409

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
                                 I P+++   SLL AC    + E G+    +++K     
Sbjct: 410 ----------------------IKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLE-PG 446

Query: 433 DTFAGNSLVNMYAKCGSIDD 452
           +T    SL  +YA  G  +D
Sbjct: 447 NTGIHVSLSGIYASLGQWED 466



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 228/462 (49%), Gaps = 16/462 (3%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           +P R+ VSW +L S         +A+  F  M  +G+ P  F+LSS   A A  G  L G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            ++H   ++LG+D+++F A+ L DMY+K G L +A  VF  +   D V+W A+I G   +
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 176 EHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
              + A+  F+ MK    +  +   + S L A  G++   L + +HC + K   + +  V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV-----ISGHLQNGGDMEAASLFPWM 289
              L+DMYAK   ++ A  +  + P      WN+V     I G+++     EA  ++  +
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPG----GWNVVSGTSMIDGYIETDCVEEALVIYVEL 236

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            R+GV  ++ T S+++K  A    +    Q+HA  +KT    D ++ ++L+D YGKCG +
Sbjct: 237 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 296

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
             ++++F E      +A  ++I  +AQ G G EA++ +  M    I P+     SLL AC
Sbjct: 297 SLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 356

Query: 410 ANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVS 467
           ++    ++G K  +      G        + +++ Y + G +D+A +  SE+P +     
Sbjct: 357 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 416

Query: 468 WSAMIGGLAQHGRGKEALQMFGQ---MLEDGVLPNHITLVSV 506
           W +++G     G  KE  ++  Q    LE G    H++L  +
Sbjct: 417 WCSLLGACRMRG-SKELGEVAAQNLMKLEPGNTGIHVSLSGI 457



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 134/271 (49%), Gaps = 7/271 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VL A    KD +L   +H  V   GF+ +  V N+L+ MYAK  +   + R+    P   
Sbjct: 149 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW 208

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVS  S+   Y+  D +EEA+  + E+   G+ PNEF+ SSMI  CA       G ++H
Sbjct: 209 NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLH 268

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              IK     D F  + LVDMY K G +  ++ +F +IE+   ++WNAVI     H H  
Sbjct: 269 AQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGR 328

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK---MEIKSDPIVGV 236
            A++ F +M  S I PN   + S L AC+   L + G +   S+ +   +E K +    +
Sbjct: 329 EAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCI 388

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEK-NLIAW 266
             +D Y + G +DEA      MP K N   W
Sbjct: 389 --IDTYGRAGRLDEAYKFISEMPIKPNAYGW 417



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 212/436 (48%), Gaps = 24/436 (5%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP +N ++W  ++SG  QN    +A + F  M R GV   +  LS+  ++ A+  A    
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
            Q+H + V+  F+++ ++ ++L D Y KCG + +A ++F +    D VA T+MI  YA+ 
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 378 GLGEEALKLYLEMQDRE--INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           G  E A+  + +M+ RE  +  D  V  S+L+A   L      K +H  + K GF  +  
Sbjct: 121 GSLEAAVLSFRDMK-REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
             N+L++MYAK   ++ A R     P    +VS ++MI G  +    +EAL ++ ++   
Sbjct: 180 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 239

Query: 495 GVLPNHITLVSVLCACNHAGLVAE-AKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGK 551
           GV PN  T  S++  C    L+ + A+ H + ++       +++ +  + ++D+ G+ G 
Sbjct: 240 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL----IRDSFVGSTLVDMYGKCGL 295

Query: 552 FQEAMELVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAEMLFA-IEPEKSSTHVLLS 609
              +M+L + + ++ + + W A++   A+     E  Q    M+++ I P   +   LL+
Sbjct: 296 ISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA-RSKEIYAKL 668
              + AG+ D   K    MK+           IE K++ Y+  +     A R  E Y  +
Sbjct: 355 AC-SHAGLVDEGLKYFYSMKE--------AHGIEPKEEHYSCIIDTYGRAGRLDEAYKFI 405

Query: 669 DEVSDLLNKAGYVPMV 684
            E+    N  G+  ++
Sbjct: 406 SEMPIKPNAYGWCSLL 421


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/683 (38%), Positives = 405/683 (59%), Gaps = 3/683 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ACT    +  G Q+HG VV +GFD D +V  SL+  Y+K GB   +R +FD + E++
Sbjct: 43  VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKT 102

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ + Y  C     ++  F +M  + + P+ + +SS+++AC+       G++IH 
Sbjct: 103 AVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 162

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G + D+   N L+D Y K   ++    +F  +   +I+SW  +I+G  +    DW
Sbjct: 163 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG-YMQNSFDW 221

Query: 181 -ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+KLF +M      P+ F  TS L +C  +E  E GRQ+H   IK  ++S+  V  GL+
Sbjct: 222 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLI 281

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK   + +A+ +F +M E+N+I++N +I G+       EA  LF  M          
Sbjct: 282 DMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLL 341

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L   AS  A+ + KQ+H L +K     D +  ++LID Y KC +V+DA  +F+E 
Sbjct: 342 TFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 401

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D+V   +M   Y Q    EEALKLY  +Q     P+ F  ++L+ A +NL++   G+
Sbjct: 402 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q H  ++K G     F  N+LV+MYAKCGSI++A + F+    R +V W++MI   AQHG
Sbjct: 462 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 521

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +EAL MF +M+++G+ PN++T V+VL AC+HAG V +  +HF SM   FGI+P  EHY
Sbjct: 522 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHY 580

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++ +LGR+GK  EA E ++ MP +  A VW +LL A RI  NVE+G++AAEM  + +P
Sbjct: 581 ACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDP 640

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           + S +++LLSNI+AS GMW +V KVR  M  +++ KEPG SWIEV +KV  F     +H 
Sbjct: 641 KDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHR 700

Query: 660 RSKEIYAKLDEVSDLLNKAGYVP 682
            +  I + LD +   +  AGYVP
Sbjct: 701 EADMIGSVLDILIQHIKGAGYVP 723



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 165/499 (33%), Positives = 271/499 (54%), Gaps = 13/499 (2%)

Query: 76  FLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
           + EEA+  F ++   SG  PNEF L+S+I AC   G    G ++HG+ ++ G+D D++  
Sbjct: 16  YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 75

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
            +L+D Y+K GB+E A  VF  +     V+W  +IAG      +  +L+LF QM+ + + 
Sbjct: 76  TSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVV 135

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+ +  +S L AC+ +E  E G+Q+H  +++   + D  V   L+D Y KC  +   R +
Sbjct: 136 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 195

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  M  KN+I+W  +ISG++QN  D EA  LF  M R G   D    ++VL S  S +A+
Sbjct: 196 FDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEAL 255

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              +QVHA ++K   ES++++ N LID Y K   + DA K+F   +  ++++  +MI  Y
Sbjct: 256 EQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGY 315

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           +      EAL+L+ EM+ R   P      SLL   A+L A E  KQ+H  IIK G   D 
Sbjct: 316 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDL 375

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           FAG++L+++Y+KC  + DA   F E+ ++ IV W+AM  G  QH   +EAL+++  +   
Sbjct: 376 FAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFS 435

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
              PN  T  +++ A ++   +A  +H   F +   K G+         ++D+  + G  
Sbjct: 436 RQKPNEFTFAALITAASN---LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSI 492

Query: 553 QEAMELVDTMPFQANASVW 571
           +EA ++        N+S+W
Sbjct: 493 EEARKMF-------NSSIW 504


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/764 (37%), Positives = 424/764 (55%), Gaps = 84/764 (10%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           ++ SG +     ++ +I+    S D +  RK+     +     D+ +   L+  Y+ +GN
Sbjct: 39  VIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQ----PDVIARTTLITAYSALGN 94

Query: 147 LEDAVAVFKD--IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           L+ A  +F +  ++  D V +NA+I G         A++LF+ M+ +   P+ FT+ S L
Sbjct: 95  LKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVL 154

Query: 205 KACAGM--ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS---------MDEARM 253
            A   +  + ++ G Q+H +++K  I+  P V   L+ +Y KC S         M  AR 
Sbjct: 155 SASTLIFYDERQCG-QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARK 213

Query: 254 IFHLMPEKNL-------------------------------IAWNIVISGHLQNGGDMEA 282
           +F  MP++N                                IAWN +ISG+L +G   +A
Sbjct: 214 LFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDA 273

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD-DYIV---NS 338
            +LF  M   GV  D++T ++V+ + A      + KQVHA  +K     D D+++   N+
Sbjct: 274 LTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNT 333

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVD-------------------------------LVAC 367
           LI  Y K G V+ A KIF E    D                               L+  
Sbjct: 334 LITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTW 393

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T MI+  AQ G GE+ALKL+ +M+     P+ +  +  + AC+ L A E G+Q+H  I+ 
Sbjct: 394 TVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVH 453

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  S    GN+++ MYA+CG ++ A   F  +P    VSW++MI  L QHG G +A+++
Sbjct: 454 LGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIEL 513

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           + QML++G+LP+  T ++VL AC+HAGLV E   +F SM + +GI P ++HYA MID+  
Sbjct: 514 YEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFC 573

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           RAGKF +A  ++D+MPF+A A +W ALL   R + N+++G  AAE LF + P+   T+VL
Sbjct: 574 RAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVL 633

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN+YAS G W++VA+ R+ M+D  +KKEP  SW EV++KV+ F V D  H     IY  
Sbjct: 634 LSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNY 693

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L++++  + K GY+P  +  LHD+E   KE  L  HSEKLAVAFGL+  P GAT+RV KN
Sbjct: 694 LEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKN 753

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LRIC DCH + +F+SK+V REI+VRD  RFHHF+NG CSC  YW
Sbjct: 754 LRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 253/599 (42%), Gaps = 113/599 (18%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-------------- 58
           L   VHG V+ +GF     + N L+ +Y K  +F+ +R+LFD IP+              
Sbjct: 31  LARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYS 90

Query: 59  -------------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
                              R  V +N++ + Y H +    A+  F+ M  +  +P++F+ 
Sbjct: 91  ALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTF 150

Query: 100 SSMINACAGS-GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV-------------- 144
           +S+++A      D     ++HG  +K G +      NAL+ +Y K               
Sbjct: 151 ASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMAS 210

Query: 145 --------------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
                                     G+L  A  +   +     ++WNA+I+G + H   
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLF 270

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP----IV 234
           + AL LF++M+   +  +  TYTS + ACA      LG+Q+H  ++K E+  D      V
Sbjct: 271 EDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSV 330

Query: 235 GVGLVDMYAKCGSMDEARMIFH-------------------------------LMPEKNL 263
           G  L+ +Y K G +D AR IF+                                MPEKNL
Sbjct: 331 GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL 390

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           + W ++ISG  QNG   +A  LF  M  +G   +    +  + + +   A+   +Q+HA 
Sbjct: 391 LTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQ 450

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            V    +S   + N++I  Y +CG VE A  +F     VD V+  SMI A  Q G G +A
Sbjct: 451 IVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKA 510

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVN 442
           ++LY +M    I PD     ++L+AC++    E+G +    +++ +G          +++
Sbjct: 511 IELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMID 570

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++ + G   DA      +P       W A++ G   HG     ++   ++ +  ++P H
Sbjct: 571 LFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFK--LIPQH 627



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 258/566 (45%), Gaps = 95/566 (16%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           +EF+  +L+  Y + G+   +R + D + E+  ++WN++ S Y+H    E+A+  F++M 
Sbjct: 222 NEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMR 281

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDSDMFSA--NALVDMYAKV 144
           L G++ +E + +S+I+ACA  G  LLG+++H Y +K  L  D D   +  N L+ +Y K 
Sbjct: 282 LLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY 341

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCV--------------LHEHN--DW-------- 180
           G ++ A  +F ++   DI++WN +++G V              + E N   W        
Sbjct: 342 GKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLA 401

Query: 181 -------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                  ALKLF QMK     PN + +  A+ AC+ +   E GRQLH  ++ +   S   
Sbjct: 402 QNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLS 461

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  ++ MYA+CG ++ AR +F  MP  + ++WN +I+   Q+G  ++A  L+  M +EG
Sbjct: 462 VGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEG 521

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  D+ T  TVL + +           HA  V+   E + Y  NS+++ YG     +   
Sbjct: 522 ILPDRRTFLTVLSACS-----------HAGLVE---EGNRYF-NSMLENYGIAPGEDHYA 566

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           +               MI  + + G   +A  +   M      P   +  +LL  C    
Sbjct: 567 R---------------MIDLFCRAGKFSDAKNVIDSMPFEARAP---IWEALLAGCRTHG 608

Query: 414 AYEQGKQVHVHIIKFGFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VS 467
             + G +    + K     D T+    L NMYA  G  +D  R    + DRG+      S
Sbjct: 609 NMDLGIEAAEKLFKLIPQHDGTYV--LLSNMYASLGRWNDVARTRKLMRDRGVKKEPACS 666

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN----HAGLVAEAK--- 520
           W+ +          +  + +F  +++D V P  +++ + L   N      G + + K   
Sbjct: 667 WTEV----------ENKVHVF--LVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVL 714

Query: 521 HHFESMEKKFGIQPMQEHYACMIDIL 546
           H  ES  K++ +    E  A    ++
Sbjct: 715 HDMESEHKEYALSTHSEKLAVAFGLM 740



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 37/314 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE----FVANSLVVMYAKCGNFIDSRRLFDAI 56
           V+ AC       LG QVH  ++    + D      V N+L+ +Y K G    +R++F  +
Sbjct: 295 VISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEM 354

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCF-------------------------------FK 85
           P + +++WN+L S YV+   +EEA  F                               F 
Sbjct: 355 PVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFN 414

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M L G  PN+++ +  I AC+  G    GR++H   + LG+DS +   NA++ MYA+ G
Sbjct: 415 QMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCG 474

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +E A  +F  +   D VSWN++IA    H H   A++L++QM    I P+  T+ + L 
Sbjct: 475 IVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLS 534

Query: 206 ACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
           AC+   L E G +   S+++   I         ++D++ + G   +A+ +   MP E   
Sbjct: 535 ACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARA 594

Query: 264 IAWNIVISGHLQNG 277
             W  +++G   +G
Sbjct: 595 PIWEALLAGCRTHG 608



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 147/373 (39%), Gaps = 88/373 (23%)

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +  +  + + VH   + + F+   +IVN LID Y K      A K+F E    D++A T+
Sbjct: 25  NLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTT 84

Query: 370 MITAYAQFGL---------------------------------GEEALKLYLEMQDREIN 396
           +ITAY+  G                                  G  A++L+  M+     
Sbjct: 85  LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQ 144

Query: 397 PDSFVCSSLLNACANLSAYEQGK--QVHVHIIKFGFMSDTFAGNSLVNMYAKCG------ 448
           PD F  +S+L+A + L  Y++ +  Q+H  ++KFG        N+L+++Y KC       
Sbjct: 145 PDDFTFASVLSA-STLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVS 203

Query: 449 ---SIDDADRAFSEIPDRGI-------------------------------VSWSAMIGG 474
               +  A + F E+P R                                 ++W+AMI G
Sbjct: 204 SSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISG 263

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG  ++AL +F +M   GV  +  T  SV+ AC   G     K     + K   + P
Sbjct: 264 YLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKN-ELNP 322

Query: 535 MQEHYA----CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ-H 589
            ++        +I +  + GK   A ++   MP + +   W  LL        V  G+  
Sbjct: 323 DRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSGY-----VNAGRME 376

Query: 590 AAEMLFAIEPEKS 602
            A+  FA  PEK+
Sbjct: 377 EAKSFFAQMPEKN 389



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC+    L  G Q+H  +V  G DS   V N+++ MYA+CG    +R +F  +P    
Sbjct: 432 ITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDP 491

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS-----GDSLLGR 116
           VSWNS+ +         +A+  +++M+  GI P+  +  ++++AC+ +     G+     
Sbjct: 492 VSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNS 551

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS-WNAVIAGCVLH 175
            +  Y I  G D        ++D++ + G   DA  V   +        W A++AGC  H
Sbjct: 552 MLENYGIAPGED----HYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTH 607

Query: 176 EHNDWAL----KLFQ 186
            + D  +    KLF+
Sbjct: 608 GNMDLGIEAAEKLFK 622



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 45/214 (21%)

Query: 406 LNAC--ANLSAYEQGKQVHVHIIKFGF-------------------------------MS 432
           LN C   NLS+Y   + VH H+I  GF                                 
Sbjct: 18  LNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP 77

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           D  A  +L+  Y+  G++  A   F+E P   R  V ++AMI G +    G  A+++F  
Sbjct: 78  DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M      P+  T  SVL A                   KFGI+        ++ +  +  
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCA 197

Query: 551 ---------KFQEAMELVDTMPFQANASVWGALL 575
                        A +L D MP + N  +W  L+
Sbjct: 198 SSPLVSSSSLMASARKLFDEMP-KRNEFIWTTLI 230


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/684 (37%), Positives = 402/684 (58%), Gaps = 8/684 (1%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAV 151
           RP+ F+  S+I A   +  +    ++H  +++LG     +F++ +LV  Y + G + +A 
Sbjct: 67  RPDGFTFPSLIRAAPSNASAA---QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAY 123

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF ++   D+ +WNA+++G   +     A+ LF +M    +  +  T +S L  C  + 
Sbjct: 124 KVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLG 183

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
            + L   +H   +K  +  +  V   L+D+Y K G ++EA+ +FH M  ++L+ WN +IS
Sbjct: 184 DQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIIS 243

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  Q G    A  +F  M   GV  D  TL ++  ++A        K +H   ++  ++ 
Sbjct: 244 GCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDV 303

Query: 332 DDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           DD I  N+++D Y K  ++E A ++F      D V+  ++IT Y Q GL  EA++ Y  M
Sbjct: 304 DDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM 363

Query: 391 QDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           Q  E +        S+L A ++L A +QG ++H   IK G   D + G  L+++YAKCG 
Sbjct: 364 QKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGK 423

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           + +A   F ++P R    W+A+I GL  HG G EAL +F +M ++G+ P+H+T VS+L A
Sbjct: 424 LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAA 483

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+HAGLV + +  F+ M+  + I P+ +HYACM D+LGRAG+  EA   +  MP + +++
Sbjct: 484 CSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSA 543

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWGALLGA RI+ NVE+G+ A++ LF ++PE    +VL+SN+YA  G WD V +VR  ++
Sbjct: 544 VWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVR 603

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRS--HARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
              L+K PG S IEVK  V  F  G+++  H + +EI A+L  +   +   GYV      
Sbjct: 604 RQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFV 663

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           L DVE+ EKE +L +HSE+LA+AFG+I TP    + + KNLR+C DCH + ++IS+I  R
Sbjct: 664 LQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITER 723

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EIIVRD NRFHHF++G CSCG +W
Sbjct: 724 EIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/479 (31%), Positives = 248/479 (51%), Gaps = 8/479 (1%)

Query: 16  QVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           Q+H   +  G      F + SLV  Y + G   ++ ++FD + ER V +WN++ S     
Sbjct: 88  QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRN 147

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               EAV  F  MV  G+  +  ++SS++  C   GD +L   +H Y++K G D ++F  
Sbjct: 148 ARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVC 207

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           NAL+D+Y K+G LE+A  VF  +E  D+V+WN++I+GC        ALK+FQ M+ S ++
Sbjct: 208 NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVS 267

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV-GVGLVDMYAKCGSMDEARM 253
           P++ T  S   A A        + LHC +++     D I+ G  +VDMYAK  +++ A+ 
Sbjct: 268 PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQ 312
           +F  MP ++ ++WN +I+G++QNG   EA   +  M + EG+   Q T  +VL + +   
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG 387

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+    ++HALS+K     D Y+   LID Y KCG + +A+ +F++          ++I+
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFM 431
                G G EAL L+  MQ   I PD     SLL AC++    +QG+    V  + +  +
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIV 507

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQ 486
                   + +M  + G +D+A      +P +   + W A++G    HG    GK A Q
Sbjct: 508 PIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 566



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 223/477 (46%), Gaps = 41/477 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C    D  L L +H   V  G D + FV N+L+ +Y K G   +++ +F  +  R 
Sbjct: 175 VLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRD 234

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ S          A+  F+ M  SG+ P+  +L S+ +A A  GD    + +H 
Sbjct: 235 LVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHC 294

Query: 121 YSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           Y ++ G+D  D+ + NA+VDMYAK+ N+E A  +F  +   D VSWN +I G + +   +
Sbjct: 295 YVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLAN 354

Query: 180 WALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A++ +  M+  E +     T+ S L A + +   + G ++H   IK+ +  D  VG  L
Sbjct: 355 EAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCL 414

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D+YAKCG + EA ++F  MP ++   WN +ISG   +G   EA +LF  M +EG+  D 
Sbjct: 415 IDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDH 474

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T  ++L + +           HA  V       D +  +            D V I K 
Sbjct: 475 VTFVSLLAACS-----------HAGLVDQGRSFFDVMQVTY-----------DIVPIAKH 512

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                  AC  M     + G  +EA      +Q+  I PDS V  +LL AC      E G
Sbjct: 513 ------YAC--MADMLGRAGQLDEAFNF---IQNMPIKPDSAVWGALLGACRIHGNVEMG 561

Query: 419 KQVHVHIIKFGFMSDTFAGNSLV-NMYAKCGSIDDADRAFSEIPDRGI---VSWSAM 471
           K    ++  F    +      L+ NMYAK G  D  D   S +  + +     WS++
Sbjct: 562 KVASQNL--FELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 616


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/756 (34%), Positives = 432/756 (57%), Gaps = 18/756 (2%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D  VA +++  Y KCG+   +  +FD I  R    WN++ S  V  +  +EA+  F++M 
Sbjct: 173 DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMR 232

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           L G+ PN+ +  + +NAC  S D     +IH ++ +L  D+D     ALV+MY K G ++
Sbjct: 233 LGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVD 292

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC- 207
           DA  +F+ I+  D+VSWNA++     +  +D A K F++M      P+  TY + L AC 
Sbjct: 293 DAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACF 352

Query: 208 ------AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE- 260
                  G  +K L  +  C +  +++    ++G  +++MY++C S   A     L+ + 
Sbjct: 353 LAAHLKHGDFVKTLAVEGGCGIESVDV----VMGTAIMNMYSRCKSPKSAFSSSLLLEQD 408

Query: 261 ---KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
               +++ WN V+S +++N    EA ++F  M   GV  D  +L TV  +  S  ++   
Sbjct: 409 RDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKG 468

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K +H+L  ++       + N+L+  Y + G +EDA +IF   +  ++++ T+M+  ++Q 
Sbjct: 469 KWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQL 528

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           GL  EAL+++  +    + P+    +++LNAC NL++    K V   + + GF  +    
Sbjct: 529 GLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVA 588

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           N L+    KCGS+++    F  +  +  VSW+  I   AQHG G   +++F  M  +G+ 
Sbjct: 589 NGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGID 648

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
              +TL+ VL +C+HAGLVA+   +F +M   +G     EHY+C+ID+L RAG  + A E
Sbjct: 649 TGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEE 708

Query: 558 LVDTMPFQANASV--WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            V  +PF  + SV  W  LL   +++ ++E G  A + +  + P  +  ++++ N+YA A
Sbjct: 709 FVKRLPF-GDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGA 767

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G W   A VR+ M +   KKEPG+SWIEVK +++ F VGD SH RS EI+ +L+ +++ +
Sbjct: 768 GKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEM 827

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            +AG+V  ++  ++D++  EKE LL  HSEKLA+AFGLI+T  G  +R+ KNLR+C DCH
Sbjct: 828 KRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCH 887

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++ +FIS +V REI+VRD  RFHHFR G+CSC  +W
Sbjct: 888 SATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 294/592 (49%), Gaps = 15/592 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  C    DL  G ++HG+++  G +  +F+   L+ MY KCG+  ++R +F  I ++S
Sbjct: 46  LIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKS 105

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG--DSLLGRKI 118
           VV+W SL          +EA   F+EM L G+ PN+ +  +++ AC      D++  R  
Sbjct: 106 VVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVE 165

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
              S++L    D+  A A+++ Y K G+L+ A  VF  I   D   WNA+I+  V HE  
Sbjct: 166 ACGSLEL----DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQG 221

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D AL+LF+QM+   + PN  T  +AL AC          ++H    ++   +D +V   L
Sbjct: 222 DEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTAL 281

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V+MY K G +D+A  IF  + E+++++WN +++ +  NG   +A   F  M   G    +
Sbjct: 282 VNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSR 341

Query: 299 TTLSTVLKS--VASFQAIGVCKQVHALSVKTAFESDDYIVNS-LIDAYGKCGHVEDAVK- 354
            T   +L +  +A+    G   +  A+      ES D ++ + +++ Y +C   + A   
Sbjct: 342 ITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSS 401

Query: 355 ---IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
              + ++     ++   ++++ Y +    EEA  ++  M    +  D+    ++ NAC +
Sbjct: 402 SLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGS 461

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
            ++ E+GK +H  + +      T   N+LV MYA+ GS++DA   F  +  R ++SW+AM
Sbjct: 462 SASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAM 521

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           +G  +Q G  +EAL++F  +L +GV PN +T  +VL AC +   +  AK   ++   + G
Sbjct: 522 VGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAK-LVQACLSETG 580

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN 583
                E    ++  LG+ G  +E       M  +   S W   + A   + N
Sbjct: 581 FFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS-WNTAIAANAQHGN 631



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 242/512 (47%), Gaps = 37/512 (7%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + +++I+ CA   D   GR+IHG  ++ G +   F    L+ MY K G+ E+A AVF+ I
Sbjct: 42  TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
           +   +V+W ++I       H   A  LF++M+   + PN  TY + L AC        G 
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC--------GH 153

Query: 218 QLHCSLIKMEIKS------DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
                 I+  +++      D IV   +++ Y KCG +D A  +F  +  ++   WN +IS
Sbjct: 154 PWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMIS 213

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
             + +    EA  LF  M   GV  ++ T    L +    +      ++HA + + A ++
Sbjct: 214 LLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDA 273

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           D  +  +L++ YGK G V+DA +IF+     D+V+  +M+TA A  G  ++A K + EM 
Sbjct: 274 DTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREML 333

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF---MSDTFAGNSLVNMYAKCG 448
                P      ++LNAC   +  + G  V    ++ G      D   G +++NMY++C 
Sbjct: 334 LVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCK 393

Query: 449 SIDDA-DRAFSEIPDR---GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           S   A   +     DR    I+ W+ ++    ++ + +EA  +F  ML  GV  + ++L+
Sbjct: 394 SPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLM 453

Query: 505 SVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
           +V  AC  +  + + K  H   +  +     P+Q     ++ +  R G  ++A E+ D M
Sbjct: 454 TVFNACGSSASLEKGKWIHSLLTESELTRKTPVQN---ALVTMYARLGSLEDAREIFDAM 510

Query: 563 PFQANASVWGALLG----------AARIYKNV 584
             + N   W A++G          A RI++++
Sbjct: 511 TTR-NVISWTAMVGVHSQLGLNREALRIFRSI 541



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 6/282 (2%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D +T + ++   A    +   +++H L ++   E  D++   L+  Y KCG  E+A  +F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +      +VA TS+I   A+ G  +EA  L+ EMQ + + P+     ++L AC +    +
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158

Query: 417 QGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
               +   +   G +  D     +++N Y KCG +D A   F  I  R    W+AMI  L
Sbjct: 159 ---TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
             H +G EAL++F QM   GV PN  T V+ L AC H+   +EA     +  ++      
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEAL-RIHAFARELAGDAD 274

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                 ++++ G+ GK  +A E+ + +  + +   W A+L A
Sbjct: 275 TVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 4/284 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  AC S   L  G  +H ++  +       V N+LV MYA+ G+  D+R +FDA+  R+
Sbjct: 455 VFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRN 514

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW ++   +       EA+  F+ ++L G+ PNE + ++++NAC         + +  
Sbjct: 515 VISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQA 574

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              + G+  ++  AN L+    K G+LE+    F+ +   + VSWN  IA    H +   
Sbjct: 575 CLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVR 634

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL-IKMEIKSDPIVGVGLV 239
            ++LFQ M+   I+    T    L +C+   L   G     ++ +     ++      ++
Sbjct: 635 GVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVI 694

Query: 240 DMYAKCGSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDME 281
           D+ ++ G ++ A      +P  ++++  W  ++ G  +  GD+E
Sbjct: 695 DLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCG-CKLHGDLE 737


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/718 (37%), Positives = 405/718 (56%), Gaps = 74/718 (10%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLHEHNDWALKLF 185
           D    +A +LV  +A  G L DA A F  +     D V  NA+++          A+ +F
Sbjct: 91  DPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 150

Query: 186 QQM-KSSEINPNMFTYTSALKACAGME--LKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
             +  S  + P+ +++T+ + A   M         QLHCS++K    +   V   L+ +Y
Sbjct: 151 HALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY 210

Query: 243 AKCGSMD---EARMIFHLMPEKNL-------------------------------IAWNI 268
            KC + +   +AR +   MP+K+                                + WN 
Sbjct: 211 MKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNA 270

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA--LSVK 326
           +ISG++Q+G   +A  LF  M  E V  D+ T ++VL + A+       K VH   + ++
Sbjct: 271 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 330

Query: 327 TAF--ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS--------------- 369
             F  E+   + N+L+  Y K G +  A +IF   +  D+V+  +               
Sbjct: 331 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 390

Query: 370 ----------------MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
                           M++ Y   GL E+ALKL+ +M+  ++ P  +  +  + AC  L 
Sbjct: 391 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELG 450

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A + G+Q+H H+++ GF +   AGN+L+ MYAKCG+++DA   F  +P+   VSW+AMI 
Sbjct: 451 ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMIS 510

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            L QHG G+EAL++F QM+ +G+ P+ I+ +++L ACNHAGLV E  H+FESM++ FGI 
Sbjct: 511 ALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGIS 570

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P ++HYA +ID+LGR+G+  EA +L+ TMPF+   S+W A+L   R   ++E G +AA+ 
Sbjct: 571 PGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQ 630

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF + P+   T++LLSN Y++AG W + A+VR+ M+D  +KKEPG SWIEV  K++ F V
Sbjct: 631 LFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLV 690

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD  H  ++E+Y  L+ +   + K GYVP  +  LHD+E  EKE +L+ HSEKLAV FGL
Sbjct: 691 GDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGL 750

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  PPGAT+ V KNLRIC DCHT+  F+SK V REI+VRDV RFHHF++G CSCG YW
Sbjct: 751 LKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 42/370 (11%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D+    ++VV Y + G+   +R +F+ +  +  V WN++ S YV      +A   F+ 
Sbjct: 231 DKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRR 290

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY----DSDMFSANALVDMYA 142
           MV   +  +EF+ +S+++ACA +G  + G+ +HG  I+L      ++ +   NALV +Y+
Sbjct: 291 MVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYS 350

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAG-----C---------VLHEHND--W------ 180
           K G +  A  +F  +   D+VSWN +++G     C         V+   ND  W      
Sbjct: 351 KGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSG 410

Query: 181 ---------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    ALKLF QM++ ++ P  +TY  A+ AC  +   + GRQLH  L++   ++ 
Sbjct: 411 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 470

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              G  L+ MYAKCG++++AR++F +MP  + ++WN +IS   Q+G   EA  LF  M  
Sbjct: 471 NSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 530

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAF---ESDDYIVNSLIDAYGKCG 347
           EG+  D+ +  T+L   A   A  V +  H   S+K  F     +D+    LID  G+ G
Sbjct: 531 EGIDPDRISFLTIL--TACNHAGLVDEGFHYFESMKRDFGISPGEDHYAR-LIDLLGRSG 587

Query: 348 HVEDAVKIFK 357
            + +A  + K
Sbjct: 588 RIGEARDLIK 597



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 234/530 (44%), Gaps = 78/530 (14%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           D     A SLV  +A  G   D+   FDA+P   R  V  N++ S +        AV  F
Sbjct: 91  DPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 150

Query: 85  KEMVLSG-IRPNEFSLSSMINACAGSGDSLLG---RKIHGYSIKLGYDSDMFSANALVDM 140
             ++ SG +RP+++S +++I+A  G   +L      ++H   +K G  + +  +NAL+ +
Sbjct: 151 HALLGSGSLRPDDYSFTALISA-VGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 209

Query: 141 YAKV----------------------------------GNLEDAVAVFKDIEHPDIVSWN 166
           Y K                                   G++  A +VF++++    V WN
Sbjct: 210 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 269

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           A+I+G V       A +LF++M S ++  + FT+TS L ACA       G+ +H  +I++
Sbjct: 270 AMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRL 329

Query: 227 EIKSDP----IVGVGLVDMYAK-------------------------------CGSMDEA 251
           +    P     V   LV +Y+K                                G +D+A
Sbjct: 330 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 389

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +F +MP KN ++W +++SG++  G   +A  LF  M  E V     T +  + +    
Sbjct: 390 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 449

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+   +Q+HA  V+  FE+ +   N+L+  Y KCG V DA  +F     +D V+  +MI
Sbjct: 450 GALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMI 509

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGF 430
           +A  Q G G EAL+L+ +M    I+PD     ++L AC +    ++G      + + FG 
Sbjct: 510 SALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 569

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
                    L+++  + G I +A      +P     S W A++ G   +G
Sbjct: 570 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 619



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 48/323 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVF--TGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VL AC +      G  VHG ++     F  ++   V N+LV +Y+K G  + ++R+FD +
Sbjct: 306 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 365

Query: 57  PERSVVSWNSLFS------C-------------------------YVHCDFLEEAVCFFK 85
             + VVSWN++ S      C                         YVH    E+A+  F 
Sbjct: 366 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 425

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M    ++P +++ +  I AC   G    GR++H + ++ G+++   + NAL+ MYAK G
Sbjct: 426 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 485

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            + DA  VF  + + D VSWNA+I+    H H   AL+LF QM +  I+P+  ++ + L 
Sbjct: 486 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 545

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVG------LVDMYAKCGSMDEARMIFHLMP 259
           AC    L + G     S+     K D  +  G      L+D+  + G + EAR +   MP
Sbjct: 546 ACNHAGLVDEGFHYFESM-----KRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP 600

Query: 260 -EKNLIAWNIVISGHLQNGGDME 281
            E     W  ++SG   N GDME
Sbjct: 601 FEPTPSIWEAILSGCRTN-GDME 622


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/704 (37%), Positives = 400/704 (56%), Gaps = 36/704 (5%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK--VGNLEDAVAVFKDIE 158
           S+I  C         ++IH  +I  G  S+      ++    K  +G++E A  VF  + 
Sbjct: 24  SLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            P+   WN +I G       + A+ ++ +M    + P+ +TY   LK        + GR+
Sbjct: 81  GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           LH  ++K+   S+  V   L+ +Y+  G +  AR +F    + +++ WN++ISG+ ++  
Sbjct: 141 LHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQ 200

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             E+  LF  M R  V     TL +VL + +  + + V K+VH        E    + N+
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA---QFGLG--------------- 380
           LID Y  CG ++ A+ IF    + D+++ T+++T +    Q GL                
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSW 320

Query: 381 -------------EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
                        +E L L+ EMQ   I PD F   S+L ACA+L A E G+ +  +I K
Sbjct: 321 TAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDK 380

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
                D+F GN+L++MY  CG+++ A R F+ +P R  +SW+A+I GLA +G G+EAL M
Sbjct: 381 NEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDM 440

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F QML+  + P+ +T + VLCAC H+G+V + K  F  M  + GI+P   HY CM+D+LG
Sbjct: 441 FSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLG 500

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           RAG  +EA E++  MP + N+ VWG+LLGA R++++ E+ + AA+ +  +EPE  + +VL
Sbjct: 501 RAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVL 560

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           L NIYA+   W+ + +VR+ M D  +KK PG S IE+   V+ F  GD+ H +SKEIY+K
Sbjct: 561 LCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSK 620

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           LDE+S  L  AGY P       D+ E EKE  +Y HSEKLA+AFGLI++ PG TIR+ KN
Sbjct: 621 LDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKN 680

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR+CVDCH   + +SK+ +RE+IVRD  RFHHFR+GSCSC  YW
Sbjct: 681 LRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 262/552 (47%), Gaps = 46/552 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK--CGNFIDSRRLFDAIPE 58
           ++K C S   L    Q+H   + TG  S+  V   ++    K   G+   +R +FD +P 
Sbjct: 25  LIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +   WN++   Y        AV  + EM+  G+ P+E++   ++           GR++
Sbjct: 82  PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H + +KLG+ S++F  NAL+ +Y+  G +  A  VF      D+V+WN +I+G    +  
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D ++KLF +M+   + P+  T  S L AC+ ++   +G+++H  +  ++I+   ++   L
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENAL 261

Query: 239 VDMYAKCGSMDE-------------------------------ARMIFHLMPEKNLIAWN 267
           +DMYA CG MD                                AR  F  MPE++ ++W 
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWT 321

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G+LQ     E  SLF  M    +  D+ T+ ++L + A   A+ + + + A   K 
Sbjct: 322 AMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN 381

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             + D ++ N+LID Y  CG+VE A++IF      D ++ T++I   A  G GEEAL ++
Sbjct: 382 EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMF 441

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAK 446
            +M    I PD   C  +L AC +    ++GK+    +  + G   +      +V++  +
Sbjct: 442 SQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGR 501

Query: 447 CGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQML-----EDGVLPNH 500
            G + +A      +P +   + W +++G    H R +E  +M  Q +     E+G +  +
Sbjct: 502 AGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH-RDEEMAEMAAQQILELEPENGAV--Y 558

Query: 501 ITLVSVLCACNH 512
           + L ++  ACN 
Sbjct: 559 VLLCNIYAACNR 570


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/769 (35%), Positives = 420/769 (54%), Gaps = 88/769 (11%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           ++ SG +PN F L+ +IN    S +    RK+     K     D+ +   L+  Y+  GN
Sbjct: 31  ILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPK----PDIVARTTLLSAYSSSGN 86

Query: 147 LEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           ++ A  +F    +   D VS+NA+I           AL LF QMK     P+ FT++S L
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 205 KACAGMELKELGRQ-LHCSLIKMEIKSDPIVGVGLVDMYAKCGS---------MDEARMI 254
            A + +  +E   Q LHC +IK+     P V   L+  Y  C S         M  AR +
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206

Query: 255 FHLMPEKNL---------------------------------IAWNIVISGHLQNGGDME 281
           F   P+  +                                 +AWN +ISG+++ G   E
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASF-QAIGV--C-KQVHALSVKTAFESDDYIV- 336
           A   F  M+  G+  D+ T ++++ +  S  + +G+  C +QVH   ++T  E   + V 
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVL 326

Query: 337 ----------------------------------NSLIDAYGKCGHVEDAVKIFKESSAV 362
                                             N+++  Y     +E+A  IF E    
Sbjct: 327 SVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER 386

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           +++  T MI+  AQ G GEE LKL+ +M+   + P  +  +  + AC+ L + + G+Q+H
Sbjct: 387 NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH 446

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
             +I+ G  S   AGN+L+ MY++CG ++ A+  F  +P    VSW+AMI  LAQHG G 
Sbjct: 447 SQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV 506

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           +A+++F QM+++ +LP+ IT +++L ACNHAGL+ E +H+F++M  ++GI P ++HYA +
Sbjct: 507 KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARL 566

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           ID+L RAG F +A  ++ +MPF+A A +W ALL   RI+ N+E+G  AA+ L  + P + 
Sbjct: 567 IDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQD 626

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
            T+++LSN+YA+ G WD VA+VR  M++  +KKEPG SW+EV++ V+ F V D  H   +
Sbjct: 627 GTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQ 686

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
            +Y  L ++ + + K GYVP  +  LHD+E   KE  L  HSEKLAV +G++  P GATI
Sbjct: 687 AVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATI 746

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RV KNLRIC DCH +F++ISK+V REI+VRD  RFHHF+NG CSCG YW
Sbjct: 747 RVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 242/594 (40%), Gaps = 117/594 (19%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE------------------ 58
           VH  ++ +GF  + F+ N L+ +Y K  N   +R+LFD IP+                  
Sbjct: 27  VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86

Query: 59  ---------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
                          R  VS+N++ + Y H +    A+  F +M   G  P+ F+ SS++
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 104 NACAGSGDSLLG-RKIHGYSIKLG-----------------------YDSDMFSANA--- 136
           +A +   D     + +H   IKLG                         S    A+A   
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206

Query: 137 ----------------LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                           ++  Y +  +L  A  +   + +P  V+WNA+I+G V     + 
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAG----MELKELGRQLHCSLIKMEIKSDP---- 232
           A   F++M S  I  + +TYTS + AC      M +   GRQ+H  +++  ++       
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVL 326

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL------------------ 274
            V   L+  Y K   M EAR +F  MP +++I+WN V+SG++                  
Sbjct: 327 SVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER 386

Query: 275 -------------QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
                        QNG   E   LF  M  EG+       +  + + +   ++   +Q+H
Sbjct: 387 NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH 446

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +  ++   +S     N+LI  Y +CG VE A  +F     VD V+  +MI A AQ G G 
Sbjct: 447 SQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV 506

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSL 440
           +A++L+ +M   +I PD     ++L AC +    ++G+        ++G          L
Sbjct: 507 KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARL 566

Query: 441 VNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +++  + G    A      +P + G   W A++ G   HG  +  +Q   ++LE
Sbjct: 567 IDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLE 620



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 158/316 (50%), Gaps = 39/316 (12%)

Query: 4   ACTSKKDLF-LGLQVHGIVVFTGFD-SDEFVA---NSLVVMYAKCGNFIDSRRLFDAIPE 58
           +C  K  +F  G QVHG ++ T  + S  FV    N+L+  Y K    I++RR+FD +P 
Sbjct: 295 SCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPV 354

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEM----VLS------------------------ 90
           R ++SWN++ S YV+   +EEA   F EM    VL+                        
Sbjct: 355 RDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQM 414

Query: 91  ---GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
              G+ P +++ +  I AC+  G    G++IH   I+LG+DS + + NAL+ MY++ G +
Sbjct: 415 KSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVV 474

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           E A +VF  + + D VSWNA+IA    H H   A++LF+QM   +I P+  T+ + L AC
Sbjct: 475 ESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTAC 534

Query: 208 AGMELKELGRQLHCSL-IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIA 265
               L + GR    ++  +  I         L+D+  + G   +A+ +   MP E     
Sbjct: 535 NHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPI 594

Query: 266 WNIVISGHLQNGGDME 281
           W  +++G  +  G+ME
Sbjct: 595 WEALLAG-CRIHGNME 609



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 152/387 (39%), Gaps = 98/387 (25%)

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           T L  V++ Q I   + VHA  + + F+ + +I+N LI+ Y K  ++  A K+F +    
Sbjct: 12  TQLNHVSTTQIIA--RAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKP 69

Query: 363 DLVACTS---------------------------------MITAYAQFGLGEEALKLYLE 389
           D+VA T+                                 MITAY+    G  AL L+++
Sbjct: 70  DIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ 129

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           M+     PD F  SS+L+A + ++  E+  Q +H  +IK G +      N+L++ Y  C 
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189

Query: 449 S---------IDDADRAFSEIPDRGI---------------------------------V 466
           S         +  A + F E P   I                                 V
Sbjct: 190 SSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDV 249

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           +W+AMI G  + G  +EA   F +M   G+  +  T  S++ AC   G   E    F   
Sbjct: 250 AWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNCG 306

Query: 527 EKKFG------IQPMQEHYA-----CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            +  G      ++P   H+       +I    +  +  EA  + D MP +   S W A+L
Sbjct: 307 RQVHGYILRTVVEP-SHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIIS-WNAVL 364

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKS 602
                 + +E     A  +F+  PE++
Sbjct: 365 SGYVNAQRIE----EANSIFSEMPERN 387



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 10/180 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC+    L  G Q+H  V+  G DS     N+L+ MY++CG    +  +F  +P    
Sbjct: 430 ITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDS 489

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG- 120
           VSWN++ +         +A+  F++M+   I P+  +  +++ AC  +G    GR     
Sbjct: 490 VSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDT 549

Query: 121 ----YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               Y I  G D        L+D+  + G    A +V K +        W A++AGC +H
Sbjct: 550 MCTRYGITPGED----HYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIH 605


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/766 (35%), Positives = 418/766 (54%), Gaps = 88/766 (11%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+ SG +P    L+ ++     S + +  R++     +   + D  +   L+  Y  +GN
Sbjct: 39  MIASGFKPRGHFLNRLLEMYCKSSNVVYARQL----FEEIPNPDAIARTTLITAYCALGN 94

Query: 147 LEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           LE    +F    +   D V +NA+I G   +     AL+LF+ M+  +  P+ FT+TS L
Sbjct: 95  LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154

Query: 205 KACA---GMELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAK--------CGSMDEA 251
            A     G E ++ G Q+HC+++K  M   S  ++   L+ +Y K        C +M  A
Sbjct: 155 SALVLFVGNE-QQCG-QMHCAVVKTGMGCVSSSVLN-ALLSVYVKRASELGIPCSAMVSA 211

Query: 252 RMIFHLMPEKNLI-------------------------------AWNIVISGHLQNGGDM 280
           R +F  MP+++ +                               AWN +ISG++  G   
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQ 271

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV---- 336
           EA +L   M   G+ FD  T +T++ + A+  +  + KQ+HA  +K     +        
Sbjct: 272 EALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVS 331

Query: 337 -------------------------------NSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
                                          N+++  Y   G +E+A   F+E    +L+
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
             T MI+  AQ G G+E LKL+ +M+     P  F  +  L AC+ L A E G+Q+H  +
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL 451

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +  G+ S    GN++++MYAKCG ++ A+  F  +P   +VSW++MI  L QHG G +A+
Sbjct: 452 VHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAI 511

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           ++F QML++GV P+ IT ++VL AC+HAGLV + +H+F SM + +GI P ++HYA M+D+
Sbjct: 512 ELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDL 571

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
             RAG F  A  ++D+MP +  A VW ALL   RI+ N+++G  AAE LF + P+   T+
Sbjct: 572 FCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTY 631

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLLSNIYA  G W++VAKVR+ M+D  ++KEP  SWIEV++KV+ F V D  H     +Y
Sbjct: 632 VLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVY 691

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
             L+++   + K GY+P  +  LHD+E  +KE  L  HSEKLAV FG++  PP AT+RV 
Sbjct: 692 RYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVF 751

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KN+RIC DCH +F+F+SK+  REIIVRD  RFHHF+NG CSC  YW
Sbjct: 752 KNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 258/599 (43%), Gaps = 119/599 (19%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-------------- 58
           L   VH  ++ +GF       N L+ MY K  N + +R+LF+ IP               
Sbjct: 31  LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 59  -------------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
                              R  V +N++ + Y H      A+  F+ M     RP++F+ 
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150

Query: 100 SSMINA---------------CA----GSG---DSLLGRKIHGY---SIKLGYD-SDMFS 133
           +S+++A               CA    G G    S+L   +  Y   + +LG   S M S
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVS 210

Query: 134 ANALVDM---------------YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           A  L D                Y +  +L  A  VF+ +      +WNA+I+G V     
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI----V 234
             AL L ++M+   I  +  TYT+ + ACA +   ++G+Q+H  ++K E+  +      V
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSV 330

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM----- 289
              L+ +Y K   +DEAR IF+ MP +N+I WN ++SG++  G   EA S F  M     
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390

Query: 290 ----------YREGVG------FDQTTL----------STVLKSVASFQAIGVCKQVHAL 323
                      + G G      F Q  L          +  L + +   A+   +Q+HA 
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            V   +ES   + N++I  Y KCG VE A  +F    +VDLV+  SMI A  Q G G +A
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKA 510

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMS--DTFAGNSL 440
           ++L+ +M    + PD     ++L AC++    E+G+     +++ +G     D +A   +
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYA--RM 568

Query: 441 VNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGR---GKEAL-QMFGQMLED 494
           V+++ + G    A      +P + G   W A++ G   HG    G EA  Q+F  M ++
Sbjct: 569 VDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN 627



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 37/309 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF----VANSLVVMYAKCGNFIDSRRLFDAI 56
           ++ AC +     +G Q+H  ++    + +      V+N+L+ +Y K     ++R++F A+
Sbjct: 295 IISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFF-------------------------------K 85
           P R++++WN++ S YV+   +EEA  FF                               K
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFK 414

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M L G  P +F+ +  + AC+  G    GR++H   + LGY+S +   NA++ MYAK G
Sbjct: 415 QMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCG 474

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +E A +VF  +   D+VSWN++IA    H H   A++LF QM    + P+  T+ + L 
Sbjct: 475 VVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534

Query: 206 ACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NL 263
           AC+   L E GR    S+++   I         +VD++ + G    AR++   MP K   
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGA 594

Query: 264 IAWNIVISG 272
             W  +++G
Sbjct: 595 PVWEALLAG 603



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 50/290 (17%)

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +  + + VHA  + + F+   + +N L++ Y K  +V  A ++F+E    D +A T++IT
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLIT 87

Query: 373 AYAQFG---LGEE------------------------------ALKLYLEMQDREINPDS 399
           AY   G   LG E                              AL+L+  M+  +  PD 
Sbjct: 88  AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147

Query: 400 FVCSSLLNACANLSAYEQG-KQVHVHIIKFGF-MSDTFAGNSLVNMYAK--------CGS 449
           F  +S+L+A       EQ   Q+H  ++K G     +   N+L+++Y K        C +
Sbjct: 148 FTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSA 207

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED-GVLPNHITLVSVLC 508
           +  A + F E+P R  ++W+ MI G  ++     A ++F  M+E+ G   N +    V C
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
            C    L    K  F       GIQ     Y  +I      G FQ   ++
Sbjct: 268 GCFQEALTLCRKMRF------LGIQFDDITYTTIISACANVGSFQMGKQM 311



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+    L  G Q+H  +V  G++S   V N+++ MYAKCG    +  +F  +P   +
Sbjct: 432 LTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDL 491

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK---- 117
           VSWNS+ +         +A+  F +M+  G+ P+  +  +++ AC+ +G    GR     
Sbjct: 492 VSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNS 551

Query: 118 -IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLH 175
            +  Y I    D        +VD++ + G    A  V   +   P    W A++AGC +H
Sbjct: 552 MLESYGITPCED----HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIH 607

Query: 176 EHNDWALKLFQQM 188
            + D  ++  +Q+
Sbjct: 608 GNMDLGIEAAEQL 620


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/682 (37%), Positives = 406/682 (59%), Gaps = 13/682 (1%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++  C     +   R IHG+ +K G+  D+F    LV++Y+K G +E A  VF ++   +
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           + +W  ++ G V + H   AL+LF +M  +   P+ +T    L AC+ ++  E G+Q+H 
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
            LIK  I  D  +G  L   Y+K   ++ A   F ++ EK++I+W  VIS    NG    
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
           + S F  M  +G+  ++ TL++VL +      + +  Q+H+LS+K  + S   I NS++ 
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLEM 390
            Y KCG + +A K+F+    ++LV   +MI  +A+              G  AL ++ ++
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
               + PD F  SS+L+ C+NL A EQG+Q+H  IIK G ++D   G +LV+MY KCGSI
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSI 429

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           D A +AF E+P R ++SW++MI G A+HG  ++ALQ+F  M   G+ PN +T V VL AC
Sbjct: 430 DKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSAC 489

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +HAGL  EA ++FE M+K++ I+P+ +H+AC+ID+  R G+ +EA ++V  M F+ N ++
Sbjct: 490 SHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETI 549

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W  L+   R +   ++G +AAE L  ++P+   T+V L N++ SAG W +V+KVR+ MK+
Sbjct: 550 WSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKE 609

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
            K+ K    SWI +K+KVY+F   D+SH +S E+Y  L+ V + +   GY P+ + ++ +
Sbjct: 610 EKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVIE 669

Query: 691 VEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
            EE+E+  L     HSEKLA+AFGL+  P    IRV K++ +C DCH    FIS +  RE
Sbjct: 670 KEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGRE 729

Query: 749 IIVRDVNRFHHFRNGSCSCGGY 770
           I++RD  + H F NG CSCGGY
Sbjct: 730 IVIRDSKQLHKFLNGYCSCGGY 751



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 263/515 (51%), Gaps = 31/515 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  +        +HG +V TGF  D FV   LV +Y+KCG    + ++FD +P R+
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +W +L + YV       A+  F +M+ +G  P+ ++L  ++NAC+       G+++H 
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK   D D    N+L   Y+K   LE A+  FK I+  D++SW +VI+ C  +     
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L  F  M S  + PN +T TS L AC  M   +LG Q+H   IK+   S  ++   ++ 
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPWM 289
           +Y KCG + EA+ +F  M   NL+ WN +I+GH +           +     A ++F  +
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           YR G+  D  T S+VL   ++  A+   +Q+H   +K+   +D  +  +L+  Y KCG +
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSI 429

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           + A K F E  +  +++ TSMIT +A+ GL ++AL+L+ +M+   I P+      +L+AC
Sbjct: 430 DKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSAC 489

Query: 410 ANLSAYEQG--------KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI- 460
           ++    ++         KQ ++  +      D FA   L++MY + G +++A     ++ 
Sbjct: 490 SHAGLADEALYYFELMQKQYNIKPVM-----DHFA--CLIDMYLRLGRVEEAFDVVHKMN 542

Query: 461 --PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             P+  I  WS +I G   HG+         Q+L+
Sbjct: 543 FEPNETI--WSMLIAGCRSHGKSDLGFYAAEQLLK 575



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 14/392 (3%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   L+ C    L    R +H  ++K     D  V   LV++Y+KCG M+ A  +F  +P
Sbjct: 67  YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 126

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +N+ AW  +++G++QN   + A  LF  M   G      TL  VL + +S Q+I   KQ
Sbjct: 127 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 186

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VHA  +K   + D  I NSL   Y K   +E A+K FK     D+++ TS+I++    G 
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 246

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
              +L  +++M    + P+ +  +S+L+AC  +   + G Q+H   IK G+ S     NS
Sbjct: 247 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 306

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG-----------LAQHGRGKEALQMF 488
           ++ +Y KCG + +A + F  +    +V+W+AMI G           +A H  G  AL MF
Sbjct: 307 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 366

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDILG 547
            ++   G+ P+  T  SVL  C++  LVA E          K G+         ++ +  
Sbjct: 367 QKLYRSGMKPDLFTFSSVLSVCSN--LVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 424

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           + G   +A +    MP +   S    + G AR
Sbjct: 425 KCGSIDKASKAFLEMPSRTMISWTSMITGFAR 456


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/692 (38%), Positives = 405/692 (58%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L++   +      L  A++VF+ I+ P+++ WN +  G 
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      AL L+  M S  + PN +T+   LK+CA  +    G+Q+H  ++K+    D 
Sbjct: 79  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
            V   L+ MY + G +++AR +F                                 +P K
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN +ISG+ + G + EA  LF  M +  V  D++T+ +V+ + A   +I + +QVH
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +      F S+  IVN+LID Y KCG VE A  +F+  S  D+++  ++I  Y    L +
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
           EAL L+ EM     +P+     S+L ACA+L A E G+ +HV+I K   G  + +    S
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG I+ A + F  I +R + SW+AMI G A HGR   A  +F +M ++ + P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 438

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V +L AC+H+G++   +H F SM++ + I P  EHY CMID+LG +G F+EA E++
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           +TM  + +  +W +LL A ++Y NVE+G+  A+ L  IEP+   ++VLLSNIYA+AG W+
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 558

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            VAK+R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL +AG
Sbjct: 559 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + +
Sbjct: 619 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 234/500 (46%), Gaps = 71/500 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK+C   K    G Q+HG V+  G+D D +V  SL+ MY + G   D+R+         
Sbjct: 109 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 168

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 +FD IP + VVSWN++ S Y      +EA+  FKEM+ 
Sbjct: 169 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 228

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + +RP+E ++ S+++ACA S    LGR++H +    G+ S++   NAL+D+Y K G +E 
Sbjct: 229 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S  +PN  T  S L ACA 
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 348

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   E+GR +H  + K    + +       L+DMYAKCG ++ A+ +F  +  ++L +WN
Sbjct: 349 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 408

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    A  +F  M +  +  D  T   +L + +    + + + +       
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI------- 461

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F S  +DY +   ++ YG                         MI      GL +EA +
Sbjct: 462 -FRSMKEDYKITPKLEHYG------------------------CMIDLLGHSGLFKEAEE 496

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   M   E+ PD  +  SLL AC   +  E G+    ++IK     +  +   L N+YA
Sbjct: 497 MINTM---EMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIE-PKNPGSYVLLSNIYA 552

Query: 446 KCGSIDDADRAFSEIPDRGI 465
             G  ++  +  + + D+G+
Sbjct: 553 TAGRWNEVAKIRALLNDKGM 572



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 151/595 (25%), Positives = 260/595 (43%), Gaps = 76/595 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLV---VMYAKCGNFIDSRRLFDAIP 57
           +L  C + + L +   +H  ++ TG  +  +  + L+   V+         +  +F+ I 
Sbjct: 8   LLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ 64

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E +++ WN++F  +        A+  +  M+  G+ PN ++   ++ +CA S     G++
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------------ 159
           IHG+ +KLGYD D++   +L+ MY + G LEDA  VF    H                  
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184

Query: 160 -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                         D+VSWNA+I+G     +N  AL+LF++M  + + P+  T  S + A
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     ELGRQ+H  +      S+  +   L+D+Y KCG ++ A  +F  +  K++I+W
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G+       EA  LF  M R G   +  T+ ++L + A   AI + + +H    K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364

Query: 327 --TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
                 +      SLID Y KCG +E A ++F       L +  +MI  +A  G    A 
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            ++  M+  EI PD      LL+AC++    + G+ +      F  M + +     +  Y
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI------FRSMKEDYKITPKLEHY 478

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
                                     MI  L   G  KEA +M   M  +   P+ +   
Sbjct: 479 G------------------------CMIDLLGHSGLFKEAEEMINTMEME---PDGVIWC 511

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAGKFQEAMEL 558
           S+L AC     V   + + +++ K   I+P     Y  + +I   AG++ E  ++
Sbjct: 512 SLLKACKMYANVELGESYAQNLIK---IEPKNPGSYVLLSNIYATAGRWNEVAKI 563


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/727 (35%), Positives = 421/727 (57%), Gaps = 7/727 (0%)

Query: 48  DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           D+ +LFD + +     WN +   +  C    EAV F+  MV +G++ + F+   +I + A
Sbjct: 82  DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
           G      G+KIH   IKLG+ SD++  N+L+ +Y K+G   DA  VF+++   DIVSWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +I+G +       +L LF++M      P+ F+  SAL AC+ +   ++G+++HC  ++  
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261

Query: 228 IKS-DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
           I++ D +V   ++DMY+K G +  A  IF+ M ++N++AWN++I  + +NG   +A   F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321

Query: 287 PWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
             M  + G+  D  T   +L + A  +     + +H  +++  F     +  +LID YG+
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETALIDMYGE 377

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG ++ A  IF   +  ++++  S+I AY Q G    AL+L+ E+ D  + PDS   +S+
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L A A   +  +G+++H +I+K  + S+T   NSLV+MYA CG ++DA + F+ I  + +
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW+++I   A HG G+ ++ +F +M+   V PN  T  S+L AC+ +G+V E   +FES
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFES 557

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           M++++GI P  EHY CM+D++GR G F  A   ++ MPF   A +WG+LL A+R +K++ 
Sbjct: 558 MKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDIT 617

Query: 586 VGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVK 645
           + + AAE +F +E + +  +VLL N+YA AG W++V +++  M+   + +    S +E K
Sbjct: 618 IAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677

Query: 646 DKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG-YVPMVETDLHDVEESEKEQLLYHHS 704
            K + FT GDRSH  + +IY  LD VS ++ +   YV  V     +     +      HS
Sbjct: 678 GKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHS 737

Query: 705 EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
            +LA  FGLI+T  G  + V+ N RIC  CH   E  S++  REI+V D   FHHF NG 
Sbjct: 738 VRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGR 797

Query: 765 CSCGGYW 771
           CSCG YW
Sbjct: 798 CSCGNYW 804



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 251/464 (54%), Gaps = 7/464 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+      L  G ++H +V+  GF SD +V NSL+ +Y K G   D+ ++F+ +PER 
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+ S Y+       ++  FKEM+  G +P+ FS  S + AC+      +G++IH 
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255

Query: 121 YSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           ++++   ++ D+    +++DMY+K G +  A  +F  +   +IV+WN +I     +    
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315

Query: 180 WALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A   FQ+M + + + P++ T  + L A A +E    GR +H   ++       ++   L
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETAL 371

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY +CG +  A +IF  M EKN+I+WN +I+ ++QNG +  A  LF  ++   +  D 
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           TT++++L + A   ++   +++HA  VK+ + S+  I+NSL+  Y  CG +EDA K F  
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+  S+I AYA  G G  ++ L+ EM    +NP+    +SLL AC+     ++G
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            +    + + +G          ++++  + G+   A R   E+P
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 204/379 (53%), Gaps = 12/379 (3%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAG---CVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
           +EDA+ +F ++   D   WN +I G   C L+     A++ + +M  + +  + FTY   
Sbjct: 80  MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE---AVQFYSRMVFAGVKADTFTYPFV 136

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           +K+ AG+   E G+++H  +IK+   SD  V   L+ +Y K G   +A  +F  MPE+++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +ISG+L  G    +  LF  M + G   D+ +  + L + +   +  + K++H  
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256

Query: 324 SVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           +V++  E+ D +V  S++D Y K G V  A +IF      ++VA   MI  YA+ G   +
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD 316

Query: 383 ALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           A   + +M ++  + PD     +LL A A L    +G+ +H + ++ GF+       +L+
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALI 372

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MY +CG +  A+  F  + ++ ++SW+++I    Q+G+   AL++F ++ +  ++P+  
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432

Query: 502 TLVSVLCACNHAGLVAEAK 520
           T+ S+L A   +  ++E +
Sbjct: 433 TIASILPAYAESLSLSEGR 451



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 182/350 (52%), Gaps = 9/350 (2%)

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
           +DP +   L   +A    M++A  +F  M + +   WN++I G    G  +EA   +  M
Sbjct: 63  NDPALTRALRG-FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
              GV  D  T   V+KSVA   ++   K++HA+ +K  F SD Y+ NSLI  Y K G  
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            DA K+F+E    D+V+  SMI+ Y   G G  +L L+ EM      PD F   S L AC
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241

Query: 410 ANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           +++ + + GK++H H ++    + D     S+++MY+K G +  A+R F+ +  R IV+W
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           + MIG  A++GR  +A   F +M E +G+ P+ IT +++L A   + ++     H  +M 
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMR 358

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +  G  P       +ID+ G  G+ + A  + D M  + N   W +++ A
Sbjct: 359 R--GFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/786 (34%), Positives = 446/786 (56%), Gaps = 20/786 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVV-FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+ C   + L  G ++H + V       +  + N +V MYA C +  D++  FDA+ +R
Sbjct: 49  LLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQR 108

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL-GRKI 118
           ++ SW  L + +      +E +   + M   G+RP+  +  + + +C G  +SL  G +I
Sbjct: 109 NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSC-GDPESLRDGIRI 167

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHEH 177
           H   +    + D   +NAL++MY K G+L  A  VF  +E   +++SW+ +     LH  
Sbjct: 168 HQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALH-G 226

Query: 178 NDW-ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           N W AL+ F+ M    I        + L AC+   L + GR +H  +     +S+ +V  
Sbjct: 227 NVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVAN 286

Query: 237 GLVDMYAKCGSMDEARMIFHLMPE--KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
            ++ MY +CG+++EAR +F  M E  +++++WNI++S ++ N    +A  L+  M     
Sbjct: 287 AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA- 345

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T  ++L + +S + +G+ + +H   V    E +  + N+L+  Y KCG   +A  
Sbjct: 346 --DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARA 403

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN-------PDSFVCSSLLN 407
           +F +     +++ T++I+AY +  L  EA  L+ +M + E N       PD+    ++LN
Sbjct: 404 VFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILN 463

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           ACA++SA EQGK V       G  SD   G ++VN+Y KCG I++  R F  +  R  V 
Sbjct: 464 ACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQ 523

Query: 468 -WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
            W+AMI   AQ G+  EAL++F +M  +GV P+  + VS+L AC+H GL  + K +F SM
Sbjct: 524 LWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSM 583

Query: 527 EKKF-GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
             ++  +    +H+ C+ D+LGR G+ +EA E ++ +P + +A  W +LL A R +++++
Sbjct: 584 TTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLK 643

Query: 586 VGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVK 645
             +  A  L  +EP  ++ +V LSNIYA    W  VAKVR+FM +  +KKE G+S IE+ 
Sbjct: 644 RAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIG 703

Query: 646 DKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSE 705
             ++ F  GD +H R++EI  +L ++   + + GYVP  +  LH V+E EKE+LL+ HSE
Sbjct: 704 KYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSE 763

Query: 706 KLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSC 765
           +LA+A GLI+TP G  +RV KNLR+C DCHT+ + ISKI  R+I+VRD  RFH F++G C
Sbjct: 764 RLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKC 823

Query: 766 SCGGYW 771
           SC  YW
Sbjct: 824 SCQDYW 829



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 258/521 (49%), Gaps = 18/521 (3%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG-YDSDMFSANALVDMYAKVGNLED 149
            +R    + + ++  CA +     GRKIH  ++K      ++   N +V MYA   +  D
Sbjct: 38  AVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGD 97

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A A F  +E  ++ SW  ++A   +   +   L+  ++M+   + P+  T+ +AL +C  
Sbjct: 98  AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGD 157

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE-KNLIAWNI 268
            E    G ++H  ++   ++ DP V   L++MY KCGS+  A+ +F  M   +N+I+W+I
Sbjct: 158 PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 217

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +   H  +G   EA   F +M   G+   ++ + T+L + +S   +   + +H+    + 
Sbjct: 218 MAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSG 277

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAYAQFGLGEEALKL 386
           FES+  + N+++  YG+CG VE+A K+F   + +  D+V+   M++AY     G++A++L
Sbjct: 278 FESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQL 337

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           Y  MQ   +  D     SLL+AC++      G+ +H  I+      +   GN+LV+MYAK
Sbjct: 338 YQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAK 394

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-------DGVLPN 499
           CGS  +A   F ++  R I+SW+ +I    +     EA  +F QMLE         V P+
Sbjct: 395 CGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPD 454

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +  V++L AC     + + K   E      G+   +     ++++ G+ G+ +E   + 
Sbjct: 455 ALAFVTILNACADVSALEQGKMVSEQA-ASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           D +  + +  +W A++    +Y        A ++ + +E E
Sbjct: 514 DGVCSRPDVQLWNAMIA---VYAQFGQSHEALKLFWRMEME 551



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 200/417 (47%), Gaps = 19/417 (4%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           TY   L+ CA  +    GR++H   +K   +  + I+G  +V MYA C S  +A+  F  
Sbjct: 45  TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           + ++NL +W  +++    +G   E       M ++GV  D  T  T L S    +++   
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQ 376
            ++H + V +  E D  + N+L++ Y KCG +  A ++F K     ++++ + M  A+A 
Sbjct: 165 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHAL 224

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G   EAL+ +  M    I        ++L+AC++ +  + G+ +H  I   GF S+   
Sbjct: 225 HGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLV 284

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
            N+++ MY +CG++++A + F  + +  R +VSW+ M+     + RGK+A+Q++ +M   
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM--- 341

Query: 495 GVLPNHITLVSVLCACNHA-----GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            +  + +T VS+L AC+ A     G V   +   + +EK   +         ++ +  + 
Sbjct: 342 QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN------ALVSMYAKC 395

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           G   EA  + D M  Q +   W  ++ A    + V    H  + +  +E   SS  V
Sbjct: 396 GSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 451



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 6/236 (2%)

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAK 446
           L+++ + +  ++   + LL  CA   A  +G+++H   +K   +  +   GN +V+MYA 
Sbjct: 32  LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           C S  DA  AF  +  R + SW+ ++   A  G+ KE L+   +M +DGV P+ +T ++ 
Sbjct: 92  CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151

Query: 507 LCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           L +C +   L    + H   ++ +  I P   +   ++++  + G    A  +   M   
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERT 209

Query: 566 ANASVWGALLGAARIYKNV-EVGQHAAEM-LFAIEPEKSSTHVLLSNIYASAGMWD 619
            N   W  + GA  ++ NV E  +H   M L  I+  KS+   +LS   + A + D
Sbjct: 210 RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD 265


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/693 (37%), Positives = 408/693 (58%), Gaps = 13/693 (1%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G R        ++  C     +   R IHG+ +K G+  D+F    LV++Y+K G +E A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF ++   ++ +W  ++ G V + H   AL+LF +M  +   P+ +T    L AC+ +
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
           +  E G+Q+H  LIK  I  D  +G  L   Y+K   ++ A   F ++ EK++I+W  VI
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S    NG    + S F  M  +G+  ++ TL++VL +      + +  Q+H+LS+K  + 
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GL 379
           S   I NS++  Y KCG + +A K+F+    ++LV   +MI  +A+              
Sbjct: 293 SSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKS 352

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G  AL ++ ++    + PD F  SS+L+ C+NL A EQG+Q+H  IIK G ++D   G +
Sbjct: 353 GSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTA 412

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           LV+MY KCGSID A +AF E+P R ++SW++MI G A+HG  ++ALQ+F  M   G+ PN
Sbjct: 413 LVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPN 472

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +T V VL AC+HAGL  EA ++FE M+K++ I+P+ +H+AC+ID+  R G+ +EA ++V
Sbjct: 473 QVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 532

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             M F+ N ++W  L+   R +   ++G +AAE L  ++P+   T+V L N++ SAG W 
Sbjct: 533 HKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWK 592

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +V+KVR+ MK+ K+ K    SWI +K+KVY+F   D+SH +S E+Y  L+ V + +   G
Sbjct: 593 DVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALG 652

Query: 680 YVPMVETDLHDVEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           Y P+ + ++ + EE+E+  L     HSEKLA+AFGL+  P    IRV K++ +C DCH  
Sbjct: 653 YEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNF 712

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
             FIS +  REI++RD  + H F NG CSCGGY
Sbjct: 713 IRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 263/515 (51%), Gaps = 31/515 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  +        +HG +V TGF  D FV   LV +Y+KCG    + ++FD +P R+
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +W +L + YV       A+  F +M+ +G  P+ ++L  ++NAC+       G+++H 
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK   D D    N+L   Y+K   LE A+  FK I+  D++SW +VI+ C  +     
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L  F  M S  + PN +T TS L AC  M   +LG Q+H   IK+   S  ++   ++ 
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 303

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPWM 289
           +Y KCG + EA+ +F  M   NL+ WN +I+GH +           +     A ++F  +
Sbjct: 304 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 363

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           YR G+  D  T S+VL   ++  A+   +Q+H   +K+   +D  +  +L+  Y KCG +
Sbjct: 364 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSI 423

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           + A K F E  +  +++ TSMIT +A+ GL ++AL+L+ +M+   I P+      +L+AC
Sbjct: 424 DKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSAC 483

Query: 410 ANLSAYEQG--------KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI- 460
           ++    ++         KQ ++  +      D FA   L++MY + G +++A     ++ 
Sbjct: 484 SHAGLADEALYYFELMQKQYNIKPVM-----DHFA--CLIDMYLRLGRVEEAFDVVHKMN 536

Query: 461 --PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             P+  I  WS +I G   HG+         Q+L+
Sbjct: 537 FEPNETI--WSMLIAGCRSHGKSDLGFYAAEQLLK 569


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/590 (40%), Positives = 366/590 (62%), Gaps = 1/590 (0%)

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+    + + E+ P    Y + + ACA  +  E  R++H  L       D  +   L+ +
Sbjct: 36  LRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL 95

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCGS+ EAR +F  M  K++++W  +I+G+ QN    EA  L P M +     +  T 
Sbjct: 96  YCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTF 155

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++LK+  +    G+ +Q+HAL+VK  +  D Y+ ++L+D Y +CG ++ A  +F +  +
Sbjct: 156 ASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDS 215

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            + V+  ++I+ +A+ G GE AL  + EM         F  SS+ ++ A L A EQGK V
Sbjct: 216 KNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWV 275

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H H+IK       FAGN+L++MYAK GS+ DA + F  + D+ +V+W+ M+   AQ+G G
Sbjct: 276 HAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLG 335

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KEA+  F +M + G+  N +T + +L AC+H GLV E K +FE M K++ ++P  +H+  
Sbjct: 336 KEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVT 394

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++ +LGRAG    A+  +  MP +  A+VWGALL A R++KN +VGQ AA+ +F ++P+ 
Sbjct: 395 VVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDD 454

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S   VLL NIYAS G WD  A+VRR MK   +KKEP  SW+E+++ V+ F   D +H R+
Sbjct: 455 SGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRA 514

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           +EIY    ++S  + K GYVP ++  L  V++ E+E  L +HSEKLA+AF LI  P GAT
Sbjct: 515 EEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGAT 574

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KN+RIC DCH++F++ISK+  REI+VRD NRFHHF NGSCSC  YW
Sbjct: 575 IRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 256/551 (46%), Gaps = 56/551 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC   K+L    +VH  +  + F  D F+ NSL+ +Y KCG+ +++R++FD +  + +
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW SL + Y   D  EEA+     M+    +PN F+ +S++ A     DS +GR+IH  
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHAL 177

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K  +  D++  +AL+DMYA+ G ++ A AVF  ++  + VSWNA+I+G       + A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L  F +M  +      FTY+S   + A +   E G+ +H  +IK   K     G  L+DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDM 297

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAK GSM +AR +F  + +K+L+ WN +++   Q G   EA S F  M + G+  +Q T 
Sbjct: 298 YAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTF 357

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFE-SDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +L + +     G+ K+      K  FE   +Y +   ID +                 
Sbjct: 358 LCILTACSHG---GLVKE-----GKRYFEMMKEYDLEPEIDHF----------------- 392

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                   +++    + GL   AL    +M    I P + V  +LL AC      + G+ 
Sbjct: 393 -------VTVVALLGRAGLLNFALVFIFKM---PIEPTAAVWGALLAACRMHKNAKVGQF 442

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM---- 471
              H+ +     D+     L N+YA  G  D A R    +   G+      SW  M    
Sbjct: 443 AADHVFELD-PDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSV 501

Query: 472 ---IGGLAQHGRGKEALQMFGQ----MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
              +     H R +E  +M+GQ    + ++G +P+   +  VL   +     A  ++H E
Sbjct: 502 HMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPD---MDYVLLRVDDQEREANLQYHSE 558

Query: 525 SMEKKFGIQPM 535
            +   F +  M
Sbjct: 559 KLALAFALIEM 569



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 202/409 (49%), Gaps = 10/409 (2%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P      + I ACA S +    RK+H +     +  D F  N+L+ +Y K G++ +A 
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF ++   D+VSW ++IAG   ++  + A+ L   M      PN FT+ S LKA     
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
              +GRQ+H   +K +   D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +IS
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  + G    A   F  M R G      T S+V  S+A   A+   K VHA  +K+  + 
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             +  N+L+D Y K G + DA K+F      DLV   +M+TA+AQ+GLG+EA+  + EM+
Sbjct: 287 TAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMR 346

Query: 392 DREI--NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
              I  N  +F+C  +L AC++    ++GK+    + ++    +     ++V +  + G 
Sbjct: 347 KSGIYLNQVTFLC--ILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGL 404

Query: 450 IDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           ++ A     ++P     + W A++     H   K      GQ   D V 
Sbjct: 405 LNFALVFIFKMPIEPTAAVWGALLAACRMHKNAK-----VGQFAADHVF 448



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 139/273 (50%), Gaps = 1/273 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +  D  +G Q+H + V   +  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 158 LLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKN 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L S +      E A+  F EM+ +G     F+ SS+ ++ A  G    G+ +H 
Sbjct: 218 GVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHA 277

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK       F+ N L+DMYAK G++ DA  VF  ++  D+V+WN ++     +     
Sbjct: 278 HMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKE 337

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+ S I  N  T+   L AC+   L + G++    + + +++ +    V +V 
Sbjct: 338 AVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVA 397

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +  + G ++ A +    MP E     W  +++ 
Sbjct: 398 LLGRAGLLNFALVFIFKMPIEPTAAVWGALLAA 430


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 265/761 (34%), Positives = 428/761 (56%), Gaps = 69/761 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + + C+ +K L  G Q H  ++ T F    FV N L+ MY KC +   + ++FD +P+R 
Sbjct: 48  IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRD 107

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG---IRPNEFSLSSM------------INA 105
            VSWN++   Y     +  A   F  M  +G   +   +F +  M            + +
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKS 167

Query: 106 CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA----------------------- 142
           C+   D   G +IHG ++K+G+D D+ + +AL+DMYA                       
Sbjct: 168 CSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAG 227

Query: 143 ------------------------------KVGNLED-AVAVFKDIEHPDIVSWNAVIAG 171
                                         K  NL D +  +F  + + ++ S+NA+I G
Sbjct: 228 VGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVG 287

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
               +    AL +F+ ++ S +  +  + + A +ACA ++    G Q+H   +K   +S+
Sbjct: 288 YARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSN 347

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             V   ++DMY KCG++ EA ++F  M  ++ ++WN +I+ H QNG + +  SLF WM +
Sbjct: 348 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 407

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            G+  D+ T  +VLK+ A +QA+    ++H   +K+    D ++  +LID Y KCG +E 
Sbjct: 408 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEK 467

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A K+    +   +V+  ++I+ ++     EEA K + +M +  ++PD+F  +++L+ CAN
Sbjct: 468 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN 527

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L   E GKQ+H  IIK    SD +  ++LV+MY+KCG++ D    F + P+R  V+W+AM
Sbjct: 528 LVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAM 587

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           + G AQHG G+EAL++F  M  + V PNH T ++VL AC H GLV +  H+F SM   +G
Sbjct: 588 VCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYG 647

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           + P  EHY+C++DI+GR+G+  +A+EL++ MPF+A+A +W  LL   +I+ NVEV + AA
Sbjct: 648 LDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAA 707

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             +  +EPE S+ +VLLSNIYA+AGMW+ V K+R+ M+ N LKKEPG SWIE+K +V+ F
Sbjct: 708 YSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAF 767

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
            VGD++H RSKEIY  LD ++D +   GY+P  +  L+D E
Sbjct: 768 LVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 223/530 (42%), Gaps = 70/530 (13%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + S +   C+       G++ H   I   +   +F  N L+ MY K  +L  A  VF  +
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP---------------NMFTYTS 202
              D VSWNA++ G         A KLF  M  +                   +  T+  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            LK+C+ +E    G Q+H   +KM    D + G  L+DMYAKC                 
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCC---------------- 207

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
                      +QN        LF  M + GVG                       Q+H 
Sbjct: 208 -----------VQNDDLRGGLELFKEMQKAGVG---------------------ALQLHG 235

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVED-AVKIFKESSAVDLVACTSMITAYAQFGLGE 381
            ++KT F +D  I  + +D Y KC ++ D + ++F      +L +  ++I  YA+   G 
Sbjct: 236 HALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGI 295

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EAL ++  +Q   +  D    S    ACA +    +G QVH   +K    S+    N+++
Sbjct: 296 EALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 355

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MY KCG++ +A   F E+  R  VSW+A+I    Q+G  ++ L +F  ML+ G+ P+  
Sbjct: 356 DMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 415

Query: 502 TLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           T  SVL AC     L    + H   ++ + G+         +ID+  + G  ++A +L D
Sbjct: 416 TYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVG--IALIDMYSKCGMMEKAEKLHD 473

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHA-AEML-FAIEPEKSSTHVLL 608
            +  Q   S W A++    + K  E  Q   ++ML   ++P+  +   +L
Sbjct: 474 RLAEQTVVS-WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 522



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 152/387 (39%), Gaps = 81/387 (20%)

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q+    +   + P+   +     + T S + +  +  +A+   KQ HA  + T F+  
Sbjct: 17  NFQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPT 76

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY----- 387
            ++ N LI  Y KC  +  A K+F      D V+  +M+  YA  G    A KL+     
Sbjct: 77  VFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPG 136

Query: 388 -----LEMQDREINP-----DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
                +E+ D  +       D    + +L +C++L  +  G Q+H   +K GF  D   G
Sbjct: 137 TGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTG 196

Query: 438 NSLVNMYAKCGSIDDADRA----FSE---------------------------------- 459
           ++L++MYAKC   +D  R     F E                                  
Sbjct: 197 SALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMY 256

Query: 460 ----------------IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
                           +P+  + S++A+I G A+  +G EAL MF  + + G+  + ++L
Sbjct: 257 MKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 316

Query: 504 VSVLCACNHAGLVAEAKHHFESME-KKFGIQPMQEHYAC----MIDILGRAGKFQEAMEL 558
                AC      A  K   E ++     ++ + +   C    ++D+ G+ G   EA  +
Sbjct: 317 SGAXRAC------AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 370

Query: 559 VDTMPFQANASVWGALLGAARIYKNVE 585
            + M    +A  W A++ A     N E
Sbjct: 371 FEEM-VSRDAVSWNAIIAAHEQNGNEE 396


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/650 (38%), Positives = 393/650 (60%), Gaps = 2/650 (0%)

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           +LG+  + F  N L+D+Y K    +DA+AVF  I+  ++ SW  ++A    +   D    
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
            F+ M    INP     +  L AC       +GR +  +++   I+ + IV   LV +Y 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
           K G   +A  +F  M  ++++AW+ +++ + +NG   EA  LF  M  +GV  ++ TL +
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
            L + AS   +     +H        +S   +  +L++ YGKCG +E A + F +    +
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH- 422
           +VA +++  AYA+     +A+++   M    + P+S    S+L+ACA ++A +QG+++H 
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 423 -VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
            +H++  G  SD +   +LVNMY+KCG++  A   F +I    +V W+++I   AQHG+ 
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQT 362

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           ++AL++F +M  +G+ P  IT  SVL AC+HAG++ + + HF S     GI P  EH+ C
Sbjct: 363 EKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGC 422

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           M+D+LGRAG   ++ +L+  MPF+ +   W A LGA R Y+N++    AAE LF ++P K
Sbjct: 423 MVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRK 482

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            + +VLLSN+YA AG W +VA++R+ M+     KE G SWIEVKD+V+ F  GD  H R 
Sbjct: 483 RAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRI 542

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            EI+A+L  ++ L+  AGYVP  E  LHDV++  KE ++ +HSEKLA+AF L+ TP G+ 
Sbjct: 543 GEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSP 602

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IRV KNLR+C DCHT+ +FISK+V+REI+VRD NRFH F+NG+CSCG YW
Sbjct: 603 IRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 236/453 (52%), Gaps = 4/453 (0%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           G+  + F+ N L+ +Y KC  F D+  +F  I  ++V SW  + + +      +    FF
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           + M+L GI P E  +S  ++AC  + +  +GR I    +  G + +     ALV +Y K+
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G+  DA +VF  + H D+V+W+A++A    + H   AL LF+QM    + PN  T  S L
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            ACA +     G  +H  +    I+S  +VG  LV++Y KCG ++ A   F  + EKN++
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVV 244

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL- 323
           AW+ + + + +N  + +A  +   M  EG+  + TT  +VL + A+  A+   +++H   
Sbjct: 245 AWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERI 304

Query: 324 -SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             +    ESD Y++ +L++ Y KCG++  A  +F + + +DLV   S+I   AQ G  E+
Sbjct: 305 HVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEK 364

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLV 441
           AL+L+  M+   + P     +S+L AC++    +QG++  V  I   G   +      +V
Sbjct: 365 ALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMV 424

Query: 442 NMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
           ++  + G I D++     +P +   V+W A +G
Sbjct: 425 DLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLG 457



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 164/306 (53%), Gaps = 2/306 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L ACT  +++ +G  +   ++ TG + +  V  +LV +Y K G+  D+  +F  +  R V
Sbjct: 83  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDV 142

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+W+++ + Y       EA+  F++M L G+ PN+ +L S ++ACA  GD   G  +H  
Sbjct: 143 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 202

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
               G  S +    ALV++Y K G +E A   F  I   ++V+W+A+ A    ++ N  A
Sbjct: 203 VEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDA 262

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH--CSLIKMEIKSDPIVGVGLV 239
           +++  +M    + PN  T+ S L ACA +   + GR++H    ++   ++SD  V   LV
Sbjct: 263 IRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALV 322

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY+KCG++  A  +F  +   +L+ WN +I+ + Q+G   +A  LF  M  EG+     
Sbjct: 323 NMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 382

Query: 300 TLSTVL 305
           T ++VL
Sbjct: 383 TFTSVL 388


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/657 (38%), Positives = 392/657 (59%), Gaps = 43/657 (6%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAK--VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           ++H   ++ G+  D + + AL+  YA     N + A+ VF  I +P++  WN VI GC+ 
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +     A+  + +M   +  PN FTY +  KAC+  +  + GRQ+H  ++K  I SD  +
Sbjct: 111 NNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               + MYA  G +++AR +F+   E +++ WN +I G+L+ G    A  LF  M     
Sbjct: 170 KSAGIQMYASFGRLEDARKMFY-SGESDVVCWNTMIDGYLKCGVLEAAKGLFAQM----- 223

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
                     +K++ S+                         N +I+   K G++ DA K
Sbjct: 224 ---------PVKNIGSW-------------------------NVMINGLAKGGNLGDARK 249

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E S  D ++ +SM+  Y   G  +EAL+++ +MQ  E  P  F+ SS+L AC+N+ A
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            +QG+ VH ++ +     D   G +L++MYAKCG +D     F E+ +R I +W+AMIGG
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
           LA HGR ++AL++F ++ E  + PN ITLV VL AC HAG V +    F++M + +G+ P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHY CM+D+LGR+G F EA +L+++MP + NA+VWGALLGA RI+ N ++ +   ++L
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             +EP+ S  +VLLSNIYA  G +D+V+K+R+ MK+  +K  PG+S +++   V+ F +G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH + KEIY KL  + + L  AG+ P     L D++E EKE  + +HSEKLA+AFGLI
Sbjct: 550 DGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T PG  I + KNLR+C DCH++ + IS+I  REIIVRD  R+HHF+NG+CSC  +W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 226/472 (47%), Gaps = 53/472 (11%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H +V+ +G   D +V+ +L+  YA     NF  + ++F +IP  +V  WN +    + 
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            + L +A+ F+  MV+   RPN+F+  ++  AC+ +     GR+IHG+ +K G  SD+  
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +A + MYA  G LEDA  +F   E  D+V WN +I G +     + A  LF QM     
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQM----- 223

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG----LVDMYAKCGSMD 249
                                                 P+  +G    +++  AK G++ 
Sbjct: 224 --------------------------------------PVKNIGSWNVMINGLAKGGNLG 245

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +AR +F  M E++ I+W+ ++ G++  G   EA  +F  M RE     +  LS+VL + +
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACS 305

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +  AI   + VHA   + + + D  +  +L+D Y KCG ++   ++F+E    ++    +
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF- 428
           MI   A  G  E+AL+L+ ++Q+  + P+      +L ACA+    ++G ++   + +F 
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHG 479
           G   +      +V++  + G   +A+   + +P +     W A++G    HG
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 204/472 (43%), Gaps = 88/472 (18%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + KAC+  + +  G Q+HG VV  G  SD  + ++ + MYA  G   D+R++F +  E  
Sbjct: 138 LFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESD 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WN++   Y+ C  LE A   F +M +  I                            
Sbjct: 197 VVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG--------------------------- 229

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                       S N +++  AK GNL DA  +F ++   D +SW++++ G +       
Sbjct: 230 ------------SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKE 277

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++FQQM+  E  P  F  +S L AC+ +   + GR +H  L +  IK D ++G  L+D
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLD 337

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +D    +F  M E+ +  WN +I G   +G   +A  LF  +    +  +  T
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---K 357
           L  VL + A           HA                        G V+  ++IF   +
Sbjct: 398 LVGVLTACA-----------HA------------------------GFVDKGLRIFQTMR 422

Query: 358 ESSAVD--LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           E   VD  L     M+    + GL  EA  L   M    + P++ V  +LL AC     +
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGACRIHGNF 479

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           +  ++V   +++   +    +G    L N+YAK G  DD  +    + +RGI
Sbjct: 480 DLAERVGKILLE---LEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI 528



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 69/343 (20%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC--GHVEDAVKIFKESSAVD 363
           KS+ S Q +    Q+HAL +++    D Y+  +L+  Y      + + A+K+F      +
Sbjct: 41  KSITSLQYL---TQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPN 97

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           +     +I    +     +A+  Y  M   +  P+ F   +L  AC+   A ++G+Q+H 
Sbjct: 98  VFIWNIVIKGCLENNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHG 156

Query: 424 HIIKFGFMSDT-----------------------FAG-------NSLVNMYAKCGSIDDA 453
           H++K G  SD                        ++G       N++++ Y KCG ++ A
Sbjct: 157 HVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAA 216

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQ-------------------------------HGRGK 482
              F+++P + I SW+ MI GLA+                                GR K
Sbjct: 217 KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYK 276

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EAL++F QM  +   P    L SVL AC++ G + + +    +  K+  I+        +
Sbjct: 277 EALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGR-WVHAYLKRNSIKLDAVLGTAL 335

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           +D+  + G+     E+ + M  +     W A++G   I+   E
Sbjct: 336 LDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 16/259 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC++   +  G  VH  +       D  +  +L+ MYAKCG       +F+ + ER 
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +WN++          E+A+  F ++    ++PN  +L  ++ ACA +G    G +I  
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQ 419

Query: 121 YSIKL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
              +  G D ++     +VD+  + G   +A  +   +   P+   W A++  C +H + 
Sbjct: 420 TMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNF 479

Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS---DPIV 234
           D A ++ + +   E  N   +   S + A       ++GR    S I+  +K+     + 
Sbjct: 480 DLAERVGKILLELEPQNSGRYVLLSNIYA-------KVGRFDDVSKIRKLMKNRGIKTVP 532

Query: 235 GVGLVDMYAKCGSMDEARM 253
           GV +VD+    G++ E +M
Sbjct: 533 GVSIVDLN---GTVHEFKM 548


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/701 (37%), Positives = 416/701 (59%), Gaps = 48/701 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK+C+S +D   G+Q+HG+ V  GFD D    ++L+ MYAKC     S + F ++PE++
Sbjct: 180 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKN 239

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++ +  V  D L   +  FKEM  +G+  ++ + +S+  +CAG     LG ++HG
Sbjct: 240 WVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHG 299

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + +D+    A +DMY K  NL DA  +F  + + ++ S+NA+I G   +  +D 
Sbjct: 300 HALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVG---YARSDK 356

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L L           +  + + A +ACA ++    G Q+H   +K   +S+  V   ++D
Sbjct: 357 GLGL-----------DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 405

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ EA ++F  M  ++ ++WN +I+ H QNG + +  SLF              
Sbjct: 406 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF-------------- 451

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
                              +H   +K+    D ++  +LID Y KCG +E A K+    +
Sbjct: 452 -------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 492

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++I+ ++     EEA K + +M +  ++PD+F  +++L+ CANL   E GKQ
Sbjct: 493 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 552

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK    SD +  ++LV+MY+KCG++ D    F + P+R  V+W+AM+ G AQHG 
Sbjct: 553 IHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGL 612

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+EAL++F  M  + V PNH T ++VL AC H GLV +  H+F SM   +G+ P  EHY+
Sbjct: 613 GEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYS 672

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++DI+GR+G+  +A+EL++ MPF+A+A +W  LL   +I+ NVEV + AA  +  +EPE
Sbjct: 673 CVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPE 732

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S+ +VLLSNIYA+AGMW+ V K+R+ M+ N LKKEPG SWIE+K +V+ F VGD++H R
Sbjct: 733 DSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPR 792

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE-ESEKEQLL 700
           SKEIY  LD ++D +   GY+P  +  L+D E  S + Q+L
Sbjct: 793 SKEIYENLDVLTDEMKWVGYMPDTDFILNDDELRSLQNQIL 833



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 170/607 (28%), Positives = 309/607 (50%), Gaps = 82/607 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC----------------- 43
           + + C+ +K L  G Q H  ++ T F    FV N L+ MY KC                 
Sbjct: 48  IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRD 107

Query: 44  --------------GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         G+   +++LFDA+PER VVSWNSL S Y+H     + +  F +M  
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGR 167

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G   +  + + ++ +C+   D   G +IHG ++K+G+D D+ + +AL+DMYAK   L+ 
Sbjct: 168 MGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDC 227

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           ++  F  +   + VSW+A+IAGCV ++     L+LF++M+ + +  +  T+ S  ++CAG
Sbjct: 228 SIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAG 287

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +    LG QLH   +K +  +D ++G   +DMY KC ++ +A+ +F+ +P  NL ++N +
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAI 347

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G+ ++               +G+G D+ +LS   ++ A  +      QVH LS+K+  
Sbjct: 348 IVGYARSD--------------KGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLC 393

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           +S+  + N+++D YGKCG + +A  +F+E  + D V+  ++I A+ Q G  E+ L L+  
Sbjct: 394 QSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF-- 451

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
                                          +H  IIK     D+F G +L++MY+KCG 
Sbjct: 452 -------------------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGM 480

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++ A++    + ++ +VSW+A+I G +   + +EA + F +MLE GV P++ T  ++L  
Sbjct: 481 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 540

Query: 510 CNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           C +   V   K  H + ++K+  +Q      + ++D+  + G  Q+   + +  P   + 
Sbjct: 541 CANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDF 597

Query: 569 SVWGALL 575
             W A++
Sbjct: 598 VTWNAMV 604



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 31/314 (9%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           T++   + C+  +    G+Q H  +I  E K    V   L+ MY KC  ++ A  +F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 259 PEKNLIAWNI-------------------------------VISGHLQNGGDMEAASLFP 287
           P+++ ++WN                                +ISG+L NG   +   +F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M R G  FD+TT + VLKS +S +  G   Q+H L+VK  F+ D    ++L+D Y KC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            ++ +++ F      + V+ +++I    Q       L+L+ EMQ   +       +S+  
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           +CA LSA   G Q+H H +K  F +D   G + ++MY KC ++ DA + F+ +P+  + S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 468 WSAMIGGLAQHGRG 481
           ++A+I G A+  +G
Sbjct: 344 YNAIIVGYARSDKG 357



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 153/341 (44%), Gaps = 38/341 (11%)

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q+    +   + P+   +     + T S + +  +  +A+   KQ HA  + T F+  
Sbjct: 17  NFQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPT 76

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            ++ N LI  Y KC  +E A K+F      D V+  +M+  YA  G    A KL+  M +
Sbjct: 77  VFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPE 136

Query: 393 REINP-------------------------------DSFVCSSLLNACANLSAYEQGKQV 421
           R++                                 D    + +L +C++L  +  G Q+
Sbjct: 137 RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 196

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +K GF  D   G++L++MYAKC  +D + + F  +P++  VSWSA+I G  Q+   
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA---EAKHHFESMEKKFGIQPMQEH 538
           +  L++F +M + GV  +  T  SV  +C  AGL A    ++ H  +++  FG   +   
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSC--AGLSALRLGSQLHGHALKTDFGTDVVIG- 313

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
               +D+  +     +A +L +++P     S    ++G AR
Sbjct: 314 -TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR 353


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/632 (40%), Positives = 371/632 (58%), Gaps = 1/632 (0%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MY+K+     A  + +      +V+W A+I+G V + +   AL  F +M+   I PN FT
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +  A KA   + L   G+Q+H   +K+   +D  VG    DMY+K G   EA+ +F  MP
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +N+  WN  IS  + +G   +A   F    R G   D  T    L + A  + + + +Q
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H L +++ FE D  + N +ID YGKC  VE A  +F      + V+  +M+ A  Q   
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            E+A  ++L  +   I    ++ SS+++A A +S  E G+ VH   +K     D F G++
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           LV+MY KCGSI+D ++ F E+P+R +VSW+AMI G A  G    A+ +F +M  + V  N
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-AN 359

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
           ++TL+ VL AC+  G V      FESM  ++ I+P  EHYAC+ D+LGRAG  + A E V
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV 419

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             MP +   SVWGALL A R+Y   E+G+ AA+ LF ++P+ S  HVLLSN++A+AG WD
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWD 479

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
               VR+ MKD  +KK  G SW+  K+KV+ F   D SH R+ EI A L ++   +  AG
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAG 539

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           Y+P     L+D+EE EK   + +HSEK+A+AFGLIA PPG  IR+ KNLRIC DCH++F+
Sbjct: 540 YMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFK 599

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           FIS IV REIIVRD NRFH FR+  CSC  +W
Sbjct: 600 FISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 238/487 (48%), Gaps = 29/487 (5%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY+K      ++ L    P R VV+W +L S  V   +   A+ +F +M    I+PN+F+
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
                 A         G++IH  ++KLG  +D F   +  DMY+K G   +A  +F ++ 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             ++  WNA I+  VL      A+  F + +     P++ T+ + L ACA     +LGRQ
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           LH  +I+   + D  V  G++D+Y KC  ++ A M+F+ M  +N ++W  +++   QN  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             +A  +F    +EG+      +S+V+ + A    +   + VHAL+VK   E D ++ ++
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-NP 397
           L+D YGKCG +ED  ++F E    +LV+  +MI+ YA  G  + A+ L+ EMQ   + N 
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANY 360

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSI 450
            + +C  +L+AC+   A + G ++      F  M D +           + +M  + G +
Sbjct: 361 VTLIC--VLSACSRGGAVKLGNEI------FESMRDRYRIEPGAEHYACIADMLGRAGMV 412

Query: 451 DDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVLP-------NHIT 502
           + A     ++P R  +S W A++     +G  +      G++  D +         NH+ 
Sbjct: 413 ERAYEFVQKMPIRPTISVWGALLNACRVYGEPE-----LGKIAADNLFKLDPKDSGNHVL 467

Query: 503 LVSVLCA 509
           L ++  A
Sbjct: 468 LSNMFAA 474



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 223/468 (47%), Gaps = 43/468 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            KA T+    F G Q+H I +  G  +D+FV  S   MY+K G   +++RLFD +P R+V
Sbjct: 65  FKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNV 124

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
             WN+  S  V      +A+  F E    G  P+  +  + +NACA +    LGR++HG 
Sbjct: 125 AVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGL 184

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            I+ G++ D+  AN ++D+Y K   +E A  VF  +   + VSW  ++A C  ++  + A
Sbjct: 185 VIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKA 244

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             +F   +   I    +  +S + A AG+   E GR +H   +K  ++ D  VG  LVDM
Sbjct: 245 CVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDM 304

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCGS+++   +FH MPE+NL++WN +ISG+   G    A +LF  M  E V  +  TL
Sbjct: 305 YGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTL 363

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFES--DDYIVNSLIDAYGKCGHVEDAVKIFKES 359
             VL + +   A+ +  ++        FES  D Y +    + Y                
Sbjct: 364 ICVLSACSRGGAVKLGNEI--------FESMRDRYRIEPGAEHY---------------- 399

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                 AC + +   A  G+ E A   Y  +Q   I P   V  +LLNAC      E GK
Sbjct: 400 ------ACIADMLGRA--GMVERA---YEFVQKMPIRPTISVWGALLNACRVYGEPELGK 448

Query: 420 QVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
               ++ K   +    +GN   L NM+A  G  D+A     E+ D GI
Sbjct: 449 IAADNLFK---LDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGI 493



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 11/181 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ A      L  G  VH + V    + D FV ++LV MY KCG+  D  ++F  +PER+
Sbjct: 266 VISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERN 325

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           +VSWN++ S Y H   ++ A+  F+EM    +  N  +L  +++AC+  G   LG +I  
Sbjct: 326 LVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFE 384

Query: 119 ---HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
                Y I+ G +        + DM  + G +E A    + +   P I  W A++  C +
Sbjct: 385 SMRDRYRIEPGAE----HYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRV 440

Query: 175 H 175
           +
Sbjct: 441 Y 441


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 236/571 (41%), Positives = 364/571 (63%), Gaps = 1/571 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y S + ACA     +  R +H  L   +      +   L+ +Y KCG++ +AR +F  MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +++ +W  +I+G+ QN    EA  L P M R     +  T +++LK+  +  + G+ +Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HAL+VK  +  D Y+ ++L+D Y +CG ++ A+ +F +  + + V+  ++I  +A+ G 
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           GE  L ++ EMQ        F  SS+ +A A + A EQGK VH H+IK G     F GN+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           +++MYAK GS+ DA + F  +  + +V+W++M+   AQ+G G+EA+  F +M + GV  N
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT +S+L AC+H GLV E K +F+ M K++ ++P  +HY  ++D+LGRAG   +A+  +
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFI 425

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             MP +  A+VWGALLG+ R++KN ++GQ AA+ +F ++P+ +   VLL NIYAS G WD
Sbjct: 426 FKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWD 485

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
             A+VR+ MK   +KKEP  SW+E+++ V+ F   D +H RS+EIY K +E+S  + KAG
Sbjct: 486 AAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAG 545

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           YVP  +  L  V+E E++  L +HSEK+A+AF LI  P GATIR+ KN+RIC DCH++F 
Sbjct: 546 YVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFR 605

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           +ISK+  REI+VRD NRFHHF +GSCSCG Y
Sbjct: 606 YISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 194/360 (53%), Gaps = 5/360 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   + L     +H  +  + F    F+ NSL+ +Y KCG   D+RR+FD +P R 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SW SL + Y   D  +EA+     M+    +PN F+ +S++ A   S  S +G +IH 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K  +  D++  +AL+DMYA+ G ++ A+AVF  +E  + VSWNA+IAG       + 
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +F +M+ +      FTY+S   A AG+   E G+ +H  +IK   +    VG  ++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GSM +AR +F  + +K+++ WN +++   Q G   EA + F  M + GV  +Q T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFES--DDYIVNSLIDAYGKCGHVEDA-VKIFK 357
             ++L + +    +   KQ   +  +   E   D Y+  +++D  G+ G + DA V IFK
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYV--TVVDLLGRAGLLNDALVFIFK 427



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 6/398 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S+I ACA        R IH +     +   +F  N+L+ +Y K G + DA  VF  +   
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           D+ SW ++IAG   ++  D AL L   M      PN FT+ S LKA        +G Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              +K +   D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +I+G  + G   
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
               +F  M R G      T S+V  ++A   A+   K VHA  +K+      ++ N+++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           D Y K G + DA K+F      D+V   SM+TA+AQ+GLG EA+  + EM+   ++ +  
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
              S+L AC++    ++GKQ    + ++    +     ++V++  + G ++DA     ++
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 461 PDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           P +   + W A++G    H   K      GQ   D V 
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAK-----IGQFAADHVF 461



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 140/271 (51%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +     +G Q+H + V   +  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 171 LLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKN 230

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L + +      E  +  F EM  +G     F+ SS+ +A AG G    G+ +H 
Sbjct: 231 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     F  N ++DMYAK G++ DA  VF  ++  D+V+WN+++     +     
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+   ++ N  T+ S L AC+   L + G+Q    + +  ++ +    V +VD
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVD 410

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIA-WNIVI 270
           +  + G +++A +    MP K   A W  ++
Sbjct: 411 LLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 12/226 (5%)

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           RE+     +  SL+ ACA   + +  + +H H+    F    F  NSL+++Y KCG++ D
Sbjct: 58  RELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVAD 117

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A R F  +P R + SW+++I G AQ+    EAL +   ML     PN  T  S+L A   
Sbjct: 118 ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG- 176

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           A   +       ++  K+         + ++D+  R G+   A+ + D +    N   W 
Sbjct: 177 ASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWN 235

Query: 573 ALL-GAARIYKNVEVGQHAAEMLFAIEPEKS---STHVLLSNIYAS 614
           AL+ G AR       G     +L   E +++   +TH   S+++++
Sbjct: 236 ALIAGFAR------KGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/659 (40%), Positives = 385/659 (58%), Gaps = 6/659 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH   ++ G   D F+A+ +V   +  + G+L+ A  VF  I +P   + N++I GC 
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
               +  AL  +Q+M    + P+ +T+ S  K+C        G+Q+HC   K+   SD  
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRN---SSEGKQIHCHSTKLGFASDTY 121

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-E 292
               L++MY+ CG +  AR +F  M +K +++W  +I  H Q     EA  LF  M + E
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  ++ TL  VL + A  + + + K++H    +  F     +   L+D Y KCG V+ A
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F ++   +L +   MI  + +    EEAL L+ EMQ + I  D    +SLL AC +L
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A E GK +H +I K     D   G +LV+MYAKCGSI+ A + F E+P++ +++W+A+I
Sbjct: 302 GALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALI 361

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            GLA  G+ + ALQ F +M   GV P+ IT V VL AC+HAG V E   HF SM   +GI
Sbjct: 362 LGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGI 421

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           QP  EHY  ++DILGRAG+  EA EL+ +MP   +  V G LLGA RI+ N+E  + AA+
Sbjct: 422 QPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAK 481

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            L  I+P  S T+VLLSNIY S+  W+   + R  M +  ++K PG S IEV   V+ F 
Sbjct: 482 QLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFV 541

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD SH +S EI   L+++   L  AGYVP     L D+ E EKE  L  HSEKLA+AFG
Sbjct: 542 KGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFG 601

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           L++T  G  IRV KNLRIC DCH++ + ISK+ +REIIVRD NRFHHF++G+CSC G+W
Sbjct: 602 LLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 258/498 (51%), Gaps = 26/498 (5%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H  ++ TG   D F A+ +V   +  + G+   +R +F  IP  +  + NS+      
Sbjct: 6   QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTD 65

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            +  +EA+ F++EM++ G+ P+ ++  S+  +C  S +   G++IH +S KLG+ SD ++
Sbjct: 66  KNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYA 122

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ-MKSSE 192
            N L++MY+  G L  A  VF  +E   +VSW  +I      +  + A++LF + MKS  
Sbjct: 123 QNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSEN 182

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + PN  T  + L ACA      + +++H  + +       ++   L+D+Y KCG +  AR
Sbjct: 183 VKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLAR 242

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F    EKNL +WNI+I+GH+++    EA  LF  M  +G+  D+ T++++L +     
Sbjct: 243 DLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLG 302

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+ + K +HA   K   + D  +  +L+D Y KCG +E A+++F E    D++  T++I 
Sbjct: 303 ALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALIL 362

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
             A  G  E AL+ + EM  + + PD+     +L AC++    ++G      I  F  MS
Sbjct: 363 GLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG------ISHFNSMS 416

Query: 433 DTFA-------GNSLVNMYAKCGSIDDAD---RAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
           DT+           LV++  + G I +A+   ++    PD+ ++    ++G    HG  +
Sbjct: 417 DTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVL--GGLLGACRIHGNLE 474

Query: 483 EALQMFGQMLEDGVLPNH 500
            A +   Q+LE  + P H
Sbjct: 475 AAERAAKQLLE--IDPYH 490



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 48/471 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + K+C +  +   G Q+H      GF SD +  N+L+ MY+ CG  + +R++FD + +++
Sbjct: 94  LFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKT 150

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSW ++   +   D   EAV  F  M+ S  ++PNE +L +++ ACA + D  + ++IH
Sbjct: 151 VVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIH 210

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            Y  + G+   +     L+D+Y K G ++ A  +F   +  ++ SWN +I G V   + +
Sbjct: 211 EYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYE 270

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LF++M++  I  +  T  S L AC  +   ELG+ LH  + K  I  D  +G  LV
Sbjct: 271 EALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALV 330

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCGS++ A  +FH MPEK+++ W  +I G    G    A   F  M+ +GV  D  
Sbjct: 331 DMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAI 390

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T   VL   S A F   G+    +++S     +        L+D  G+ G + +A ++ K
Sbjct: 391 TFVGVLAACSHAGFVDEGI-SHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC---ANLSA 414
                      SM  A                       PD FV   LL AC    NL A
Sbjct: 450 -----------SMPMA-----------------------PDQFVLGGLLGACRIHGNLEA 475

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            E+  +  + I    + S T+    L N+Y      ++A R    + +RG+
Sbjct: 476 AERAAKQLLEIDP--YHSGTYV--LLSNIYKSSKKWEEAKRTRELMAERGM 522



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 10/214 (4%)

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYA--KCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
           Q KQ+H  +++ G   D F  + +V   +  + GS+  A   FS+IP+    + +++I G
Sbjct: 3   QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRG 62

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ 533
                  +EAL  + +M+  G++P+  T  S+  +C ++   +E K  H  S +  F   
Sbjct: 63  CTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASD 119

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
              ++   ++++    G    A ++ D M  +   S W  ++G    +          + 
Sbjct: 120 TYAQN--TLMNMYSNCGCLVSARKVFDKMEDKTVVS-WATMIGVHAQWDQPNEAVRLFDR 176

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           +   E  K +  V L N+  +     ++A V+R 
Sbjct: 177 MMKSENVKPN-EVTLVNVLTACARARDLAMVKRI 209


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/692 (38%), Positives = 396/692 (57%), Gaps = 8/692 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  CT +KDL  G  +H  ++ TG  S  ++ NSLV +YAKCG+ + ++ +F++I  + 
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 61  VVSWNSLFSCY-----VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           VVSWN L + Y     V   F+ E    F+ M      PN  + S +  A + S ++  G
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVME---LFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            + H  +IK     D+F  ++L++MY K+G + DA  VF  I   + VSW  +I+G  + 
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A +LF  M+  E   + F YTS L A    +L   G+Q+HC  +K  + S   VG
Sbjct: 193 RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 252

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LV MY KCG +D+A   F L  +K+ I W+ +I+G+ Q G   EA +LF  M+  G  
Sbjct: 253 NALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             + T   V+ + +   A+   KQ+H  S+K  +E   Y + +L+D Y KCG + DA K 
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKG 372

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+V  TSMI+ YAQ G  E AL LY  MQ   I P     +S+L AC++L+A 
Sbjct: 373 FDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 432

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           EQGKQ+H   IK+GF  +   G++L  MYAKCGS++D +  F  +P R I++W+AMI GL
Sbjct: 433 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 492

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           +Q+G G +AL++F ++      P+++T V+VL AC+H GLV   K +F  M  +FGI P 
Sbjct: 493 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPR 552

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYACM+DIL RAGK  E  E +++        +W  LLGA R Y+N E+G +A E L 
Sbjct: 553 VEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLM 612

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +  ++SS ++LLS+IY + G  D+V +VRR MK   + KEPG SWIE+K +V+ F VGD
Sbjct: 613 ELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGD 672

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           + H +  +I ++L  + D +    Y    +T+
Sbjct: 673 QIHPQIVKICSELRRLRDHMKDECYESFNDTN 704



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 262/493 (53%), Gaps = 8/493 (1%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M L  + P   S   ++  C    D   G+ IH   ++ G  S ++  N+LV++YAK G+
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA--LKLFQQMKSSEINPNMFTYTSAL 204
           +  A  VF+ I + D+VSWN +I G        ++  ++LFQ+M++    PN  T++   
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            A +       G Q H   IK     D  VG  L++MY K G M +AR +F  +PE+N +
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +W  +ISG+       EA  LF  M RE    D+   ++VL ++     +   KQ+H L+
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K    S   + N+L+  YGKCG ++DA+K F+ S   D +  ++MIT YAQ G   EAL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L+  M      P  F    ++NAC+++ A E+GKQ+H + +K G+    +   +LV+MY
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 360

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           AKCGS+ DA + F  + +  IV W++MI G AQ+G  + AL ++ +M  + ++P+ +T+ 
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMA 420

Query: 505 SVLCACNHAGLVAEAKH-HFESMEKKFGIQ-PMQEHYACMIDILGRAGKFQEAMELVDTM 562
           SVL AC+    + + K  H ++++  F ++ P+    + M     + G  ++   +   M
Sbjct: 421 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTM---YAKCGSLEDGNLVFRRM 477

Query: 563 PFQANASVWGALL 575
           P + +   W A++
Sbjct: 478 PSR-DIMTWNAMI 489


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/646 (39%), Positives = 388/646 (60%), Gaps = 5/646 (0%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           + + A  L   YA  G++  A  +F  I   +   WN++I G   +     AL L+ +M 
Sbjct: 57  NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                P+ FTY   LKAC  + L+E+GR++H  ++   ++ D  VG  ++ MY K G ++
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVE 176

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR++F  M  ++L +WN ++SG ++NG    A  +F  M R+G   D+TTL  +L +  
Sbjct: 177 AARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACG 236

Query: 310 SFQAIGVCKQVHALSVKTAFES----DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
               + V K++H   V+   ES    + +++NS+ID Y  C  V  A K+F+     D+V
Sbjct: 237 DVMDLKVGKEIHGYVVRNG-ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVV 295

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           +  S+I+ Y + G   +AL+L+  M      PD     S+L AC  +SA   G  V  ++
Sbjct: 296 SWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYV 355

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           +K G++ +   G +L+ MYA CGS+  A R F E+P++ + + + M+ G   HGRG+EA+
Sbjct: 356 VKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAI 415

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F +ML  GV P+     +VL AC+H+GLV E K  F  M + + ++P   HY+C++D+
Sbjct: 416 SIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDL 475

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGRAG   EA  +++ M  + N  VW ALL A R+++NV++   +A+ LF + P+  S +
Sbjct: 476 LGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGY 535

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           V LSNIYA+   W++V  VR  +   +L+K P  S++E+   V+ F VGD SH +S +IY
Sbjct: 536 VCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIY 595

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
           AKL ++++ L KAGY P     L+DVEE  KE++L+ HSE+LA+AF LI T PG TIR+ 
Sbjct: 596 AKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRIT 655

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KNLR+C DCHT  + ISK+ +REII+RD+ RFHHFR+G CSCGGYW
Sbjct: 656 KNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 253/510 (49%), Gaps = 19/510 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L++ T+ K L   LQ+H  V   G    + ++A  L   YA CG+   ++ +FD I  +
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL---GR 116
           +   WNS+   Y   +    A+  + +M+  G +P+ F+   ++ AC   GD LL   GR
Sbjct: 88  NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC---GDLLLREMGR 144

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           K+H   +  G + D++  N+++ MY K G++E A  VF  +   D+ SWN +++G V + 
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A ++F  M+      +  T  + L AC  +   ++G+++H  +++         G 
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 237 ---GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
               ++DMY  C S+  AR +F  +  K++++WN +ISG+ + G   +A  LF  M   G
Sbjct: 265 LMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVG 324

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D+ T+ +VL +     A+ +   V +  VK  +  +  +  +LI  Y  CG +  A 
Sbjct: 325 AVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCAC 384

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F E    +L ACT M+T +   G G EA+ ++ EM  + + PD  + +++L+AC++  
Sbjct: 385 RVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSG 444

Query: 414 AYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWS 469
             ++GK++   + + +         + LV++  + G +D+A      +   P+  +  W+
Sbjct: 445 LVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV--WT 502

Query: 470 AMIGGLAQHGRGKEAL---QMFGQMLEDGV 496
           A++     H   K A+   Q   ++  DGV
Sbjct: 503 ALLSACRLHRNVKLAVISAQKLFELNPDGV 532



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 1/114 (0%)

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRA 456
           DS  C +LL +  N  +  Q  Q+H H+   G +  +T+    L   YA CG +  A   
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           F +I  +    W++MI G A +     AL ++ +ML  G  P++ T   VL AC
Sbjct: 81  FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC 134


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 270/719 (37%), Positives = 406/719 (56%), Gaps = 75/719 (10%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLHEHNDWALKLF 185
           D    +A +LV  YA  G L D+ A F  +     D V  NA+I+          A+ +F
Sbjct: 86  DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145

Query: 186 QQMKSSE--INPNMFTYTSALKACAGMELKELGR--QLHCSLIKMEIKSDPIVGVGLVDM 241
           + + +S+  + P+ +++TS L A   M    +    QLHC++ K+   +   V   L+ +
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205

Query: 242 YAKC---GSMDEARMIFHLMPEKNL-------------------------------IAWN 267
           Y KC   G   +AR +   MPEK+                                + WN
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWN 265

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH------ 321
            +ISG++Q+G   EA  LF  M  + +  D+ T +++L + A+       K VH      
Sbjct: 266 AMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRL 325

Query: 322 --------ALSVKTA-----------------FES----DDYIVNSLIDAYGKCGHVEDA 352
                   AL V  A                 F+S    D    N+++  Y + G +++A
Sbjct: 326 QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNA 385

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            +IFKE      ++   M++ Y   GL E+ALKL+ +M+  ++ P  +  +  + AC  L
Sbjct: 386 ARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGEL 445

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A + GKQ+H H+++ GF +   AGN+L+ MYA+CG++ DA   F  +P+   VSW+AMI
Sbjct: 446 GALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMI 505

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
             L QHG G+EAL++F QM+  G+ P+ I+ +++L ACNHAGLV +   +FESME+ FGI
Sbjct: 506 SALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGI 565

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P ++HYA +ID+LGRAG+  EA +L+ TMPF+   ++W A+L   RI  ++E+G +AA+
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAAD 625

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            LF + PE   T++LLSN Y++AG W + A+VR+ M+D  +KKEPG SWIEV +KV+ F 
Sbjct: 626 QLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFL 685

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
           VGD  H  + E+Y  L+ V   + K GYVP  +  L D+   EKE +L+ HSE+LAV+FG
Sbjct: 686 VGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFG 745

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           L+  P GAT+ V KNL+IC DCHT+  F+S+ V REI+VRDV RFHHF++G CSCG YW
Sbjct: 746 LLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 230/530 (43%), Gaps = 77/530 (14%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           D     A SLV  YA  G   DS   FD++P   R  V  N++ S +        AV  F
Sbjct: 86  DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145

Query: 85  KEMVLS--GIRPNEFSLSSMINACAGSGDSLLGR--KIHGYSIKLGYDSDMFSANALVDM 140
           + ++ S   +RP+++S +S+++A     D  +    ++H    KLG  + +  +NAL+ +
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205

Query: 141 YAKV----------------------------------GNLEDAVAVFKDIEHPDIVSWN 166
           Y K                                   G++  A + F++I+    V WN
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWN 265

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           A+I+G V       A +LF++M S  I P+ FT+TS L ACA       G+ +H   I++
Sbjct: 266 AMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRL 325

Query: 227 EIKSDP----IVGVGLVDMYAKCGS-------------------------------MDEA 251
           +    P     V   LV +Y+K G                                +D A
Sbjct: 326 QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNA 385

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             IF  MP K+ ++W +++SG++  G   +A  LF  M  E V     T +  + +    
Sbjct: 386 ARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGEL 445

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+   KQ+HA  V+  FE+ +   N+L+  Y +CG V+DA  +F     VD V+  +MI
Sbjct: 446 GALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMI 505

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGF 430
           +A  Q G G EAL+L+ +M  + I PD     ++L AC +    + G Q    + + FG 
Sbjct: 506 SALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGI 565

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
                    L+++  + G I +A      +P +     W A++ G   +G
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRING 615



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 38/318 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD----SDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           +L AC +      G  VHG  +    D    +   V N+LV +Y+K G    + ++FD++
Sbjct: 302 LLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM 361

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSG--------------- 91
             + VVSWN++ S Y+    L+ A   FKEM          ++SG               
Sbjct: 362 TLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFN 421

Query: 92  ------IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
                 ++P +++ +  + AC   G    G+++H + ++ G+++   + NAL+ MYA+ G
Sbjct: 422 QMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCG 481

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            ++DA  VF  + + D VSWNA+I+    H H   AL+LF QM +  I P+  ++ + L 
Sbjct: 482 AVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILT 541

Query: 206 ACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
           AC    L + G Q   S+ +   I         L+D+  + G + EAR +   MP E   
Sbjct: 542 ACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTP 601

Query: 264 IAWNIVISGHLQNGGDME 281
             W  ++SG   N GDME
Sbjct: 602 AIWEAILSGCRIN-GDME 618


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/626 (39%), Positives = 397/626 (63%), Gaps = 32/626 (5%)

Query: 178 NDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV- 234
           ND+  A+  + +M  S   P+ F + + LKA +G++  + G Q+H + +K    S  +  
Sbjct: 71  NDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTV 130

Query: 235 ------------GVG--------LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
                       G+G        L+ MYAK G +D+++ +F    ++++++WN +IS   
Sbjct: 131 ANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFS 190

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FESDD 333
           Q+    EA + F  M  EGV  D  T+++VL + +  + + V K++HA  ++      + 
Sbjct: 191 QSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENS 250

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QD 392
           ++ ++L+D Y  C  VE   ++F       +    +MI+ YA+ GL E+AL L++EM + 
Sbjct: 251 FVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKV 310

Query: 393 REINPDSFVCSSLLNACA-NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             + P++   +S++ AC  +L+A  +GK++H + I+    SD   G++LV+MYAKCG ++
Sbjct: 311 AGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLN 370

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-----VLPNHITLVSV 506
            + R F+E+P++ +++W+ +I     HG+G+EAL++F  M+ +        PN +T ++V
Sbjct: 371 LSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITV 430

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
             AC+H+GL++E  + F  M+   G++P  +HYAC++D+LGRAG+ +EA ELV+TMP + 
Sbjct: 431 FAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEF 490

Query: 567 N-ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
           +    W +LLGA RI++NVE+G+ AA+ L  +EP  +S +VLLSNIY+SAG+W+   +VR
Sbjct: 491 DKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVR 550

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + M+   +KKEPG SWIE +D+V+ F  GD SH +S++++  L+ +S+ + K GYVP   
Sbjct: 551 KNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTS 610

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             LH+V+E EKE LL  HSEKLA+AFG++ TPPG TIRV KNLR+C DCH + +FISKI+
Sbjct: 611 CVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIM 670

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REIIVRDV RFHHF+ G+CSCG YW
Sbjct: 671 EREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 228/458 (49%), Gaps = 40/458 (8%)

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           P RS  SW          +   EA+  + EM +SG RP+ F+  +++ A +G  D   G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 117 KIHGYSIKLGYDSD---------------------MFSANALVDMYAKVGNLEDAVAVFK 155
           +IH  ++K GY S                       F+ NAL+ MYAK+G ++D+ A+F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
                D+VSWN +I+     +    AL  F+ M    +  +  T  S L AC+ +E  ++
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 216 GRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           G+++H  +++  ++  +  VG  LVDMY  C  ++  R +F  +  + +  WN +ISG+ 
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292

Query: 275 QNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKS-VASFQAIGVCKQVHALSVKTAFESD 332
           +NG D +A  LF  M +  G+  + TT+++V+ + V S  AI   K++HA +++    SD
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-- 390
             + ++L+D Y KCG +  + ++F E    +++    +I A    G GEEAL+L+  M  
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 391 ---QDREINPDSFVCSSLLNACANLSAYEQG-----KQVHVHIIKFGFMSDTFAGNSLVN 442
              +  E  P+     ++  AC++     +G     +  H H ++    SD +A   +V+
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE--PTSDHYA--CVVD 468

Query: 443 MYAKCGSIDDADRAFSEIPDR--GIVSWSAMIGGLAQH 478
           +  + G +++A    + +P     + +WS+++G    H
Sbjct: 469 LLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 214/433 (49%), Gaps = 49/433 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE---------------------FVANSLVVM 39
           VLKA +  +DL  G Q+H   V  G+ S                       F  N+L+ M
Sbjct: 98  VLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAM 157

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           YAK G   DS+ LF++  +R +VSWN++ S +   D   EA+ FF+ MVL G+  +  ++
Sbjct: 158 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTI 217

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDM----FSANALVDMYAKVGNLEDAVAVFK 155
           +S++ AC+      +G++IH Y ++   ++D+    F  +ALVDMY     +E    VF 
Sbjct: 218 ASVLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGRRVFD 274

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACA-GMELK 213
            I    I  WNA+I+G   +  ++ AL LF +M K + + PN  T  S + AC   +   
Sbjct: 275 HILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAI 334

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             G+++H   I+  + SD  VG  LVDMYAKCG ++ +R +F+ MP KN+I WN++I   
Sbjct: 335 AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC 394

Query: 274 LQNGGDMEAASLFPWMYRE-GVG----FDQTTLSTVLKSVASFQAIG-----VCKQVHAL 323
             +G   EA  LF  M  E G G     ++ T  TV  + +    I        +  H  
Sbjct: 395 GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 454

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA-VDLV-ACTSMITA---YAQFG 378
            V+    SD Y    ++D  G+ G +E+A ++     A  D V A +S++ A   +    
Sbjct: 455 GVEPT--SDHYAC--VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE 510

Query: 379 LGEEALKLYLEMQ 391
           LGE A K  L ++
Sbjct: 511 LGEVAAKNLLHLE 523


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/667 (37%), Positives = 393/667 (58%), Gaps = 30/667 (4%)

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           + ++ +Y+ +  L D++ +F  +  P   ++W ++I     H     +L  F QM +S  
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA-- 251
            P+   + S LK+C  M+    G  +H  +I++ +  D      L++MY+K  S++E   
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162

Query: 252 ---------------------------RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
                                      R +F +MP++++++WN VISG+ QNG   +A  
Sbjct: 163 YKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 222

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           +   M    +  D  TLS+VL   A +  +   K++H  +++  +++D +I +SLID Y 
Sbjct: 223 MVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYA 282

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           KC  V+D+ ++F      D ++  S+I    Q G+ +E LK + +M   +I P+    SS
Sbjct: 283 KCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSS 342

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           ++ ACA+L+    GKQ+H +II+  F  + F  ++LV+MYAKCG+I  A   F ++    
Sbjct: 343 IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYD 402

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VSW+AMI G A HG   +A+ +F +M  +GV PN++  ++VL AC+HAGLV EA  +F 
Sbjct: 403 MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFN 462

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
           SM + + I P  EHYA + D+LGR G+ +EA E +  M  +   SVW  LL A R++KN+
Sbjct: 463 SMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNI 522

Query: 585 EVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEV 644
           E+ +  ++ LF ++P+    +VLLSNIY++AG W +  K+R  M+D  +KK+P  SWIE+
Sbjct: 523 ELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEI 582

Query: 645 KDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHS 704
           K+KV+ F  GD+SH     I   L  + + + + GYV      LHDVEE +K  LL  HS
Sbjct: 583 KNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHS 642

Query: 705 EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
           E+LA+ FG+I+TP G TIRV KNLR+CVDCHT+ +FISKIV REI+VRD +RFHHF++G 
Sbjct: 643 ERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGK 702

Query: 765 CSCGGYW 771
           CSCG +W
Sbjct: 703 CSCGDFW 709



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 273/580 (47%), Gaps = 80/580 (13%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER-SVVSWNSLFSCYVHC 74
           Q+H  ++ T   S   ++ +++ +Y+      DS  +F+++P   + ++W S+  CY   
Sbjct: 26  QLHAQILRTSLPSPSLLS-TILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
                ++ FF +M+ SG  P+     S++ +C    D   G  +HG  I+LG   D+++ 
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144

Query: 135 NALVDMYAKVGNLEDAVA-----------------------------VFKDIEHPDIVSW 165
           NAL++MY+K  +LE+                                VF+ +   DIVSW
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSW 204

Query: 166 NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           N VI+G   +  ++ AL + ++M ++++ P+ FT +S L   A       G+++H   I+
Sbjct: 205 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 264

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
               +D  +G  L+DMYAKC  +D++  +F+++P+ + I+WN +I+G +QNG   E    
Sbjct: 265 NGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKF 324

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M    +  +  + S+++ + A    + + KQ+H   +++ F+ + +I ++L+D Y K
Sbjct: 325 FQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAK 384

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           CG++  A  IF +    D+V+ T+MI  YA  G   +A+ L+  M+   + P+     ++
Sbjct: 385 CGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAV 444

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD--- 462
           L AC++                                    G +D+A + F+ +     
Sbjct: 445 LTACSH-----------------------------------AGLVDEAWKYFNSMTQDYR 469

Query: 463 --RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
              G+  ++A+   L + GR +EA +    M    + P      ++L AC     +  A 
Sbjct: 470 IIPGLEHYAAVADLLGRVGRLEEAYEFISDM---HIEPTGSVWSTLLAACRVHKNIELA- 525

Query: 521 HHFESMEKK-FGIQPMQ-EHYACMIDILGRAGKFQEAMEL 558
              E + KK F + P     Y  + +I   AG++++A +L
Sbjct: 526 ---EKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 562



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 125/199 (62%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           +L  G ++HG  +  G+D+D F+ +SL+ MYAKC    DS R+F  +P+   +SWNS+ +
Sbjct: 251 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
             V     +E + FF++M+++ I+PN  S SS++ ACA      LG+++HGY I+  +D 
Sbjct: 311 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 370

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++F A+ALVDMYAK GN+  A  +F  +E  D+VSW A+I G  LH H   A+ LF++M+
Sbjct: 371 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 430

Query: 190 SSEINPNMFTYTSALKACA 208
              + PN   + + L AC+
Sbjct: 431 VEGVKPNYVAFMAVLTACS 449



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 22/253 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC     L LG Q+HG ++ + FD + F+A++LV MYAKCGN   +R +FD +    
Sbjct: 343 IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYD 402

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD-----SLLG 115
           +VSW ++   Y       +A+  FK M + G++PN  +  +++ AC+ +G          
Sbjct: 403 MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFN 462

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
                Y I  G +       A+ D+  +VG LE+A     D+   P    W+ ++A C +
Sbjct: 463 SMTQDYRIIPGLEH----YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRV 518

Query: 175 HEHNDWA----LKLF----QQMKSSEINPNMFT----YTSALKACAGMELKELGRQLHCS 222
           H++ + A     KLF    Q + +  +  N+++    +  A K    M  K + ++  CS
Sbjct: 519 HKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACS 578

Query: 223 LIKMEIKSDPIVG 235
            I+++ K    V 
Sbjct: 579 WIEIKNKVHAFVA 591



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 31/240 (12%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q    T+L++ +S ++    KQ+HA  ++T+  S   ++++++  Y     + D++ IF 
Sbjct: 5   QNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPS-LLSTILSIYSNLNLLHDSLLIFN 63

Query: 358 E-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              S    +A  S+I  Y   GL   +L  +++M      PD  V  S+L +C  +    
Sbjct: 64  SLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLR 123

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD---------------------- 454
            G+ VH  II+ G   D +  N+L+NMY+K  S+++ +                      
Sbjct: 124 FGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKES 183

Query: 455 -------RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
                  + F  +P R IVSW+ +I G AQ+G  ++AL M  +M    + P+  TL SVL
Sbjct: 184 YYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 2/118 (1%)

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           +N    +C +LL   +++ +  Q KQ+H  I++    S +   ++++++Y+    + D+ 
Sbjct: 1   MNTTQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSL 59

Query: 455 RAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
             F+ +P     ++W ++I     HG    +L  F QML  G  P+H    SVL +C 
Sbjct: 60  LIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT 117


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/723 (34%), Positives = 399/723 (55%), Gaps = 70/723 (9%)

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K G  +D + +  L+  Y+      DA  V + I  P I S++++I      +  
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             ++ +F +M S  + P+     +  K CA +   ++G+Q+HC      +  D  V   +
Sbjct: 98  TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157

Query: 239 VDMYAKCGSMDEARMIFHLMPEK-----------------------------------NL 263
             MY +CG M +AR +F  M +K                                   N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN ++SG  ++G   EA  +F  ++  G   DQ T+S+VL SV   + + + + +H  
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF--------------------------- 356
            +K     D  +++++ID YGK GHV   + +F                           
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337

Query: 357 --------KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
                   +++  +++V+ TS+I   AQ G   EAL+L+ EMQ   + P+     S+L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C N++A   G+  H   ++   + +   G++L++MYAKCG I+ +   F+ +P + +V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           ++++ G + HG+ KE + +F  ++   + P+ I+  S+L AC   GL  E   +F+ M +
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
           ++GI+P  EHY+CM+++LGRAGK QEA +L+  MPF+ ++ VWGALL + R+  NV++ +
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
            AAE LF +EPE   T+VLLSNIYA+ GMW  V  +R  M+   LKK PG SWI+VK++V
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRV 637

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           YT   GD+SH +  +I  K+DE+S  + K+G+ P ++  LHDVEE E+EQ+L+ HSEKLA
Sbjct: 638 YTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLA 697

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           V FGL+ TP G  ++V KNLRIC DCH   +FIS    REI +RD NRFHHF++G CSCG
Sbjct: 698 VVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCG 757

Query: 769 GYW 771
            +W
Sbjct: 758 DFW 760



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 227/529 (42%), Gaps = 72/529 (13%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q H  ++ +G  +D +++  L+  Y+    F D+  +  +IP+ ++ S++SL        
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
              +++  F  M   G+ P+   L ++   CA      +G++IH  S   G D D F   
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPD---------------------------------- 161
           ++  MY + G + DA  VF  +   D                                  
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 162 -IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
            IVSWN +++G     ++  A+ +FQ++      P+  T +S L +    E+  +GR +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGS-------------------------------MD 249
             +IK  +  D  V   ++DMY K G                                +D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335

Query: 250 EARMIFHLMPEK----NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           +A  +F L  E+    N+++W  +I+G  QNG D+EA  LF  M   GV  +  T+ ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            +  +  A+G  +  H  +V+     + ++ ++LID Y KCG +  +  +F      +LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVH 424
              S++  ++  G  +E + ++  +    + PD    +SLL+AC  +   ++G K   + 
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
             ++G        + +VN+  + G + +A     E+P +     W A++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 206/484 (42%), Gaps = 113/484 (23%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + K C       +G Q+H +   +G D D FV  S+  MY +CG   D+R++FD + ++ 
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKD 181

Query: 61  VV-----------------------------------SWNSLFSCYVHCDFLEEAVCFFK 85
           VV                                   SWN + S +    + +EAV  F+
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           ++   G  P++ ++SS++ +   S    +GR IHGY IK G   D    +A++DMY K G
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301

Query: 146 NLEDAVAVFKDIE-----------------------------------HPDIVSWNAVIA 170
           ++   +++F   E                                     ++VSW ++IA
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           GC  +  +  AL+LF++M+ + + PN  T  S L AC  +     GR  H   +++ +  
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           +  VG  L+DMYAKCG ++ ++++F++MP KNL+ WN +++G   +G   E  S+F  + 
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           R                                   T  + D     SL+ A G+ G  +
Sbjct: 482 R-----------------------------------TRLKPDFISFTSLLSACGQVGLTD 506

Query: 351 DAVKIFKESS-----AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           +  K FK  S        L   + M+    + G  +EA  L  EM      PDS V  +L
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGAL 563

Query: 406 LNAC 409
           LN+C
Sbjct: 564 LNSC 567



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 40/319 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           VL +    + L +G  +HG V+  G   D+ V ++++ MY K G+      LF+      
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317

Query: 58  --------------------------------ERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
                                           E +VVSW S+ +         EA+  F+
Sbjct: 318 AGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFR 377

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           EM ++G++PN  ++ SM+ AC        GR  HG+++++    ++   +AL+DMYAK G
Sbjct: 378 EMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +  +  VF  +   ++V WN+++ G  +H      + +F+ +  + + P+  ++TS L 
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKN 262
           AC  + L + G + +  ++  E    P +     +V++  + G + EA  +   MP E +
Sbjct: 498 ACGQVGLTDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPD 556

Query: 263 LIAWNIVI-SGHLQNGGDM 280
              W  ++ S  LQN  D+
Sbjct: 557 SCVWGALLNSCRLQNNVDL 575



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 1/218 (0%)

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q HA  +K+  ++D YI   LI +Y       DA  + +      + + +S+I A  +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           L  +++ ++  M    + PDS V  +L   CA LSA++ GKQ+H      G   D F   
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           S+ +MY +CG + DA + F  + D+ +V+ SA++   A+ G  +E +++  +M   G+  
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           N ++   +L   N +G   EA   F+ +    G  P Q
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQ 252



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 3/213 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G   HG  V      +  V ++L+ MYAKCG    S+ +F+ +P ++
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           +V WNSL + +      +E +  F+ ++ + ++P+  S +S+++AC   G +  G K   
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S + G    +   + +V++  + G L++A  + K++   PD   W A++  C L  + 
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573

Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAGM 210
           D A    +++   E  NP  +   S + A  GM
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/656 (37%), Positives = 374/656 (57%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + IH   ++L  D D +  N ++      G+   +  VF  ++ P+I  WN +I G V  
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +  D A+ L+  M+     PN FT    LKACA      LG ++H  L+K     D  V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ +Y KC + D+A  +F  +P+KN+++W  +I+G++ +G   EA   F  +   G+ 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  +L  VL + A        + +      +    + ++  SL+D Y KCG++E A  I
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+V+ ++MI  YA  GL ++AL L+ +MQ   + PD +    +L+ACA L A 
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + G      + +  F+S+   G +L++MY+KCGS+  A   F+ +  +  V W+AM+ GL
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           + +G  K    +F  + + G+ P+  T + +LC C H G V E +  F +M++ F + P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D+LGRAG   EA +L++ MP + NA VWGALLG  +++K+  + +   + L 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP  S  +V LSNIY+    W+   K+R  MK+ +++K    SWIE+   V+ F VGD
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           +SH  S++IYAKLDE+   L   G+VP  E  L D+EE EKE  L +HSEKLAVAFGLIA
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +PP   IRV KNLR+C DCH + + ISKI  REII+RD NRFH F +GSCSC  YW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 236/467 (50%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC  K D+ LGL++H ++V  G+D D FV  SL+ +Y KC NF D+ ++FD IP+++
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ + Y+      EA+  FK+++  G++P+ FSL  ++ ACA  GD   G  I  
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y    G   ++F A +L+DMY K GNLE A  +F  +   DIVSW+ +I G   +     
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF QM+S  + P+ +T    L ACA +   +LG      + + E  S+P++G  L+D
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCGS+ +A  IF  M +K+ + WN ++ G   NG      SLF  + + G+  D+ T
Sbjct: 360 MYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENT 419

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L           C   H   V    E   +  N                ++F  + 
Sbjct: 420 FIGLL-----------CGCTHGGFVN---EGRQFFNN--------------MKRVFSLTP 451

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           +++   C  M+    + GL  EA +L   + +  + P++ V  +LL  C         +Q
Sbjct: 452 SIEHYGC--MVDLLGRAGLLNEAHQL---INNMPMKPNAVVWGALLGGCKLHKDTHLAEQ 506

Query: 421 VHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           V   +I+   +    +GN   L N+Y+     ++A++  S + ++ I
Sbjct: 507 VLKKLIE---LEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQI 550



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 232/480 (48%), Gaps = 2/480 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            +H  ++    D D ++ N ++      G+   S+ +F  + E ++  WN++    V  D
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             ++A+  +  M   G  PN F++  ++ ACA   D  LG KIH   +K GYD D+F   
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ +Y K  N +DA+ VF DI   ++VSW A+I G +   H   A+  F+++    + P
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + F+    L ACA +     G  +   +    +  +  V   L+DMY KCG+++ A +IF
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MPEK++++W+ +I G+  NG   +A  LF  M  E +  D  T+  VL + A+  A+ 
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           +     +L  +  F S+  +  +LID Y KCG V  A +IF      D V   +M+   +
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLS 393

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDT 434
             G  +    L+  ++   I PD      LL  C +     +G+Q   ++ + F      
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSI 453

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
                +V++  + G +++A +  + +P +   V W A++GG   H     A Q+  +++E
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 6/184 (3%)

Query: 396 NPDSFVCSSLL---NACAN-LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           NP S V S  L   N  +N L+ + Q K +H  +++     D +  N ++      GS +
Sbjct: 6   NPSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTN 65

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            +   FS++ +  I  W+ MI GL       +A+ ++G M   G LPN+ T+  VL AC 
Sbjct: 66  YSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACA 125

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
              L         S+  K G          ++ +  +   F +A+++ D +P   N   W
Sbjct: 126 RK-LDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSW 183

Query: 572 GALL 575
            A++
Sbjct: 184 TAII 187


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/656 (37%), Positives = 374/656 (57%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + IH   ++L  D D +  N ++      G+   +  VF  ++ P+I  WN +I G V  
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +  D A+ L+  M+     PN FT    LKACA      LG ++H  L+K     D  V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ +Y KC + D+A  +F  +P+KN+++W  +I+G++ +G   EA   F  +   G+ 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  +L  VL + A        + +      +    + ++  SL+D Y KCG++E A  I
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+V+ ++MI  YA  GL ++AL L+ +MQ   + PD +    +L+ACA L A 
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + G      + +  F+S+   G +L++MY+KCGS+  A   F+ +  +  V W+AM+ GL
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           + +G  K    +F  + + G+ P+  T + +LC C H G V E +  F +M++ F + P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D+LGRAG   EA +L++ MP + NA VWGALLG  +++K+  + +   + L 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +EP  S  +V LSNIY+    W+   K+R  MK+ +++K    SWIE+   V+ F VGD
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           +SH  S++IYAKLDE+   L   G+VP  E  L D+EE EKE  L +HSEKLAVAFGLIA
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +PP   IRV KNLR+C DCH + + ISKI  REII+RD NRFH F +GSCSC  YW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 235/467 (50%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC  K D+ LGL++H ++V  G+D D FV  SL+ +Y KC NF D+ ++FD IP+++
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ + Y+      EA+  FK+++  G++P+ FSL  ++ ACA  GD   G  I  
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y    G   ++F A +L+DMY K GNLE A  +F  +   DIVSW+ +I G   +     
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF QM+S  + P+ +T    L ACA +   +LG      + + E  S+P++G  L+D
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCGS+ +A  IF  M  K+ + WN ++ G   NG      SLF  + + G+  D+ T
Sbjct: 360 MYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENT 419

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L           C   H   V    E   +  N                ++F  + 
Sbjct: 420 FIGLL-----------CGCTHGGFVN---EGRQFFNN--------------MKRVFSLTP 451

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           +++   C  M+    + GL  EA +L   + +  + P++ V  +LL  C         +Q
Sbjct: 452 SIEHYGC--MVDLLGRAGLLNEAHQL---INNMPMKPNAVVWGALLGGCKLHKDTHLAEQ 506

Query: 421 VHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           V   +I+   +    +GN   L N+Y+     ++A++  S + ++ I
Sbjct: 507 VLKKLIE---LEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQI 550



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 232/480 (48%), Gaps = 2/480 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            +H  ++    D D ++ N ++      G+   S+ +F  + E ++  WN++    V  D
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             ++A+  +  M   G  PN F++  ++ ACA   D  LG KIH   +K GYD D+F   
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ +Y K  N +DA+ VF DI   ++VSW A+I G +   H   A+  F+++    + P
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + F+    L ACA +     G  +   +    +  +  V   L+DMY KCG+++ A +IF
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MPEK++++W+ +I G+  NG   +A  LF  M  E +  D  T+  VL + A+  A+ 
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           +     +L  +  F S+  +  +LID Y KCG V  A +IF      D V   +M+   +
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLS 393

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDT 434
             G  +    L+  ++   I PD      LL  C +     +G+Q   ++ + F      
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSI 453

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
                +V++  + G +++A +  + +P +   V W A++GG   H     A Q+  +++E
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 6/184 (3%)

Query: 396 NPDSFVCSSLL---NACAN-LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +P S V S  L   N  +N L+ + Q K +H  +++     D +  N ++      GS +
Sbjct: 6   SPTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTN 65

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            +   FS++ +  I  W+ MI GL       +A+ ++G M   G LPN+ T+  VL AC 
Sbjct: 66  YSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACA 125

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
              L         S+  K G          ++ +  +   F +A+++ D +P   N   W
Sbjct: 126 RK-LDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSW 183

Query: 572 GALL 575
            A++
Sbjct: 184 TAII 187


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 273/747 (36%), Positives = 440/747 (58%), Gaps = 17/747 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           +LK+C   +D  LG  VH  ++    + D  + NSL+ +Y+K G+   +  +F+ +    
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           +R VVSW+++ +CY +     +A+  F E +  G+ PN++  +++I AC+ S    +GR 
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 118 IHGYSIKLG-YDSDMFSANALVDMYAKVGN-LEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
             G+ +K G ++SD+    +L+DM+ K  N  E+A  VF  +   ++V+W  +I  C+  
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A++ F  M  S    + FT +S   ACA +E   LG+QLH   I+  +  D  V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305

Query: 236 VGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYR 291
             LVDMYAKC   GS+D+ R +F  M + ++++W  +I+G+++N     EA +LF  M  
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365

Query: 292 EG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           +G V  +  T S+  K+  +     V KQV   + K    S+  + NS+I  + K   +E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           DA + F+  S  +LV+  + +    +    E+A KL  E+ +RE+   +F  +SLL+  A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           N+ +  +G+Q+H  ++K G   +    N+L++MY+KCGSID A R F+ + +R ++SW++
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G A+HG     L+ F QM+E+GV PN +T V++L AC+H GLV+E   HF SM +  
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
            I+P  EHYACM+D+L RAG   +A E ++TMPFQA+  VW   LGA R++ N E+G+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           A  +  ++P + + ++ LSNIYA AG W+   ++RR MK+  L KE G SWIEV DK++ 
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV----EESEKEQLLYHHSEK 706
           F VGD +H  + +IY +LD +   + + GYVP  +  LH +    +E+EKE+LLY HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785

Query: 707 LAVAFGLIATPPGATIR-VKKNLRICV 732
           +AVAFGLI+T     ++ ++ + +I V
Sbjct: 786 IAVAFGLISTSKSRPLKMIQTSFKILV 812



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 255/511 (49%), Gaps = 17/511 (3%)

Query: 77  LEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           L  AV     M   GIRP +  + SS++ +C  + D  LG+ +H   I+   + D    N
Sbjct: 42  LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDW-ALKLFQQMKSS 191
           +L+ +Y+K G+   A  VF+ +      D+VSW+A++A C  +   +  A+K+F +    
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMA-CYGNNGRELDAIKVFVEFLEL 160

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKC-GSMD 249
            + PN + YT+ ++AC+  +   +GR     L+K    +SD  VG  L+DM+ K   S +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M E N++ W ++I+  +Q G   EA   F  M   G   D+ TLS+V  + A
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVA 366
             + + + KQ+H+ ++++    D  +  SL+D Y KC   G V+D  K+F       +++
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338

Query: 367 CTSMITAYAQ-FGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            T++IT Y +   L  EA+ L+ EM  +  + P+ F  SS   AC NLS    GKQV   
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
             K G  S++   NS+++M+ K   ++DA RAF  + ++ +VS++  + G  ++   ++A
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
            ++  ++ E  +  +  T  S+L    + G + + +    S   K G+   Q     +I 
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE-QIHSQVVKLGLSCNQPVCNALIS 517

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           +  + G    A  + + M    N   W +++
Sbjct: 518 MYSKCGSIDTASRVFNFME-NRNVISWTSMI 547


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/643 (39%), Positives = 380/643 (59%), Gaps = 36/643 (5%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D+FS NA++  Y+K GN+ED  AVF  +   D VS+N VIAG   +  +  AL+ F +M+
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                   +T+ S L AC+ +   + G+Q+H  ++   +     V   L +MYAKCG++D
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +AR +F  M  KN+++WN +ISG+LQNG       LF  M   G+  DQ T+S +L    
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILS--- 264

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                                           AY +CG++++A K F+E    D V  T+
Sbjct: 265 --------------------------------AYFQCGYIDEACKTFREIKEKDKVCWTT 292

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+   AQ G  E+AL L+ EM    + PD+F  SS++++CA L++  QG+ VH   + FG
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D    ++LV+MY+KCG   DA   F  +  R ++SW++MI G AQ+G+  EAL ++ 
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +ML + + P++IT V VL AC HAGLV   + +F S+ K  G+ P  +HY+CMI++LGRA
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRA 472

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G   +A++L+ +M F+ N  +W  LL   RI  +V  G+ AA  LF ++P  +  +++LS
Sbjct: 473 GYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLS 532

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA+ G W +VA VR  MK+NK+KK    SWIE+ ++V+ F   DR+H+ +++IY +L+
Sbjct: 533 NIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELN 592

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT-IRVKKNL 728
            +   L ++G+ P     LHDV E EK   + +HSEKLA+AF LI  P G T IR+ KN+
Sbjct: 593 RLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNI 652

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+C DCH   +F+SKI+ R II+RD+NRFHHF  G CSC   W
Sbjct: 653 RVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 222/479 (46%), Gaps = 68/479 (14%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLE--------- 78
           +D F+ N L+ +YAK GN  D+R LFD +  R V SWN++ S Y     +E         
Sbjct: 56  TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQM 115

Query: 79  ----------------------EAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
                                 +A+ FF  M   G    +++  S+++AC+   D   G+
Sbjct: 116 SVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGK 175

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IHG  +       +F  NAL +MYAK G L+ A  +F  + + ++VSWN++I+G + + 
Sbjct: 176 QIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNG 235

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             +   KLF +M+SS + P+  T ++ L A                              
Sbjct: 236 QPETCTKLFCEMQSSGLMPDQVTISNILSA------------------------------ 265

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                Y +CG +DEA   F  + EK+ + W  ++ G  QNG + +A  LF  M  E V  
Sbjct: 266 -----YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRP 320

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  T+S+V+ S A   ++   + VH  +V    + D  + ++L+D Y KCG   DA  +F
Sbjct: 321 DNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVF 380

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           K     ++++  SMI  YAQ G   EAL LY EM    + PD+     +L+AC +    E
Sbjct: 381 KRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVE 440

Query: 417 QGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDA-DRAFSEIPDRGIVSWSAMIG 473
           +G+     I K   M+ TF   S ++N+  + G +D A D   S   +   + WS ++ 
Sbjct: 441 RGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 210/472 (44%), Gaps = 73/472 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+   D+  G Q+HG +V T      FV N+L  MYAKCG    +R LFD +  ++
Sbjct: 161 VLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKN 220

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ S Y+     E     F EM  SG+ P++ ++S++++A               
Sbjct: 221 VVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA--------------- 265

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y + G +++A   F++I+  D V W  ++ GC  +   + 
Sbjct: 266 --------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEED 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++M    + P+ FT +S + +CA +     G+ +H   +   +  D +V   LVD
Sbjct: 306 ALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVD 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG   +A ++F  M  +N+I+WN +I G+ QNG D+EA +L+  M  E +  D  T
Sbjct: 366 MYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNIT 425

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL +            +HA  V+                    G+     KI   + 
Sbjct: 426 FVGVLSAC-----------MHAGLVERGQ-----------------GYFYSISKIHGMNP 457

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D  +C  MI    + G  ++A+ L   M      P+  + S+LL+ C        G+ 
Sbjct: 458 TFDHYSC--MINLLGRAGYMDKAVDLIKSMT---FEPNCLIWSTLLSVCRINCDVNNGEM 512

Query: 421 VHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
              H+ +   +    AG    L N+YA CG   D     S + +  I  ++A
Sbjct: 513 AARHLFE---LDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAA 561



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 186/433 (42%), Gaps = 72/433 (16%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSL-IKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           N  +YT  L  C         ++L   + + +   +D  +   L+ +YAK G++ +AR +
Sbjct: 21  NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDL 80

Query: 255 FHLMPEKNLIAW-------------------------------NIVISGHLQNGGDMEAA 283
           F  M  +++ +W                               N VI+G   NG   +A 
Sbjct: 81  FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQAL 140

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
             F  M  EG      T  +VL + +    I   KQ+H   V T+     ++ N+L + Y
Sbjct: 141 EFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMY 200

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            KCG ++ A  +F      ++V+  SMI+ Y Q G  E   KL+ EMQ   + PD    S
Sbjct: 201 AKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTIS 260

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           ++L+A                                   Y +CG ID+A + F EI ++
Sbjct: 261 NILSA-----------------------------------YFQCGYIDEACKTFREIKEK 285

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVAEAKHH 522
             V W+ M+ G AQ+G+ ++AL +F +ML + V P++ T+ SV+ +C   A L      H
Sbjct: 286 DKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVH 345

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL-LGAARIY 581
            +++   FG+       + ++D+  + G+  +A  +   M    N   W ++ LG A+  
Sbjct: 346 GKAV--IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM-LTRNVISWNSMILGYAQNG 402

Query: 582 KNVEVGQHAAEML 594
           K++E      EML
Sbjct: 403 KDLEALALYEEML 415


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/590 (41%), Positives = 366/590 (62%), Gaps = 1/590 (0%)

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+    + + E+ P    Y S + ACA  +  E  R++H  L       D  +   L+ M
Sbjct: 36  LRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHM 95

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KC S+ +AR +F  M  K++++W  +I+G+ QN   +EA  L P M +     +  T 
Sbjct: 96  YCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTF 155

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++LK+  ++   G  +Q+HAL+VK  +  D Y+ ++L+D Y +CG ++ A  +F +  +
Sbjct: 156 ASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            + V+  ++I+ +A+ G GE AL  + EM         F  SS+ ++ A L A EQGK V
Sbjct: 216 KNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWV 275

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H H+IK       F GN+L++MYAK GS+ DA + F  + ++ +V+W++M+   AQ+G G
Sbjct: 276 HAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLG 335

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KEA+  F +M + GV  N IT + +L AC+H GLV E K +FE M K++ ++P  +HY  
Sbjct: 336 KEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVT 394

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++ +LGRAG    A+  +  MP +  A+VWGALL A R++KN +VGQ AA+ +F ++P+ 
Sbjct: 395 VVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDD 454

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S   VLL NIYAS G WD  A+VR  MK   +KKEP  SW+E+++ V+ F   D +H ++
Sbjct: 455 SGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQA 514

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           +EIY    E+S  + K GYVP ++  L  V++ EKE  L +HSEKLA+AF LI  P GAT
Sbjct: 515 EEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGAT 574

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KN+RIC DCH++F++ISK+  REI+VRD NRFHHF +GSCSCG YW
Sbjct: 575 IRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 253/551 (45%), Gaps = 56/551 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC   K+L    ++H  +  + F  D F+ NSL+ MY KC + +D+R +FD +  + +
Sbjct: 58  ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDM 117

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW SL + Y   D   EA+     M+    +PN F+ +S++ A     DS  GR+IH  
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHAL 177

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K G+  D++  +AL+DMYA+ G ++ A AVF  ++  + VSWNA+I+G       + A
Sbjct: 178 AVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESA 237

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L  F +M  +      FTY+S   + A +   E G+ +H  +IK   K    VG  L+DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDM 297

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAK GSM +AR +F  +  K+L+ WN +++   Q G   EA S F  M + GV  +Q T 
Sbjct: 298 YAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITF 357

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFE-SDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +L + +     G+ K+      K  FE   +Y +   ID Y                 
Sbjct: 358 LCILTACSHG---GLVKE-----GKRYFEMMKEYDLEPEIDHY----------------- 392

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                   +++    + GL   AL    +M    + P + V  +LL AC      + G+ 
Sbjct: 393 -------VTVVALLGRAGLLNYALVFIFKM---PMEPTAAVWGALLAACRMHKNAKVGQF 442

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM---- 471
              H+ +     D+     L N+YA  G  D A R    +   G+      SW  M    
Sbjct: 443 AADHVFELD-PDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSV 501

Query: 472 ---IGGLAQHGRGKEALQMFGQ----MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
              +     H + +E  +M+G+    + ++G +P+   +  VL   +     A  ++H E
Sbjct: 502 HMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPD---MDYVLLHVDDQEKEANLQYHSE 558

Query: 525 SMEKKFGIQPM 535
            +   F +  M
Sbjct: 559 KLALAFALIEM 569



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 198/409 (48%), Gaps = 10/409 (2%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P      S I ACA S +    RKIH +     +  D F  N+L+ MY K  ++ DA 
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D+VSW ++IAG   ++    A+ L   M      PN FT+ S LKA     
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
               GRQ+H   +K     D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +IS
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  + G    A   F  M R G      T S+V  S+A   A+   K VHA  +K+  + 
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKL 286

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             ++ N+L+D Y K G + DA K+F      DLV   SM+TA+AQ+GLG+EA+  + EM+
Sbjct: 287 TAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346

Query: 392 DREI--NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
              +  N  +F+C  +L AC++    ++GK+    + ++    +     ++V +  + G 
Sbjct: 347 KSGVYLNQITFLC--ILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGL 404

Query: 450 IDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           ++ A     ++P     + W A++     H   K      GQ   D V 
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK-----VGQFAADHVF 448



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 140/273 (51%), Gaps = 1/273 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +  D   G Q+H + V  G+  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 158 LLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L S +      E A+  F EM+ +G     F+ SS+ ++ A  G    G+ +H 
Sbjct: 218 GVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHA 277

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK       F  N L+DMYAK G++ DA  VF  +++ D+V+WN+++     +     
Sbjct: 278 HVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKE 337

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+ S +  N  T+   L AC+   L + G++    + + +++ +    V +V 
Sbjct: 338 AVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVA 397

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +  + G ++ A +    MP E     W  +++ 
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/572 (41%), Positives = 368/572 (64%), Gaps = 1/572 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y +A+ AC        GRQ+H  +I    +    +G  LV MY +CG++D+AR +   MP
Sbjct: 45  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+++++W  +ISG+ Q    +EA  LF  M R G   ++ TL+TVL S +  Q+I   KQ
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VH+L VKT FES  ++ +SL+D Y K  ++++A ++F      D+V+CT++I+ YAQ GL
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL L+ ++    +  +    ++L+ A + L++ + GKQVH  I++          NS
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+KCG +  + R F  + +R +VSW+AM+ G  +HG G E + +F  + ++ V P+
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPD 343

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +TL++VL  C+H GLV E    F+++ K+        HY C+ID+LGR+G+ ++A+ L+
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 403

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           + MPF++  S+WG+LLGA R++ NV VG+  A+ L  +EPE +  +V+LSNIYA+AGMW 
Sbjct: 404 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 463

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +V KVR+ M +  + KEPG SWI +   ++TF   +R H   K+I AK+ E+   +  AG
Sbjct: 464 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG 523

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP +   LHDV++ +KE++L  HSEKLA+ FGL+ TPPG TIRV KNLRICVDCH   +
Sbjct: 524 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAK 583

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+SK+  REI +RD NRFH   +G+C+CG YW
Sbjct: 584 FVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 222/418 (53%), Gaps = 12/418 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC  ++ L+ G QVH  ++   +    F+   LV MY +CG   D+R + D +PERSV
Sbjct: 49  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 108

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ S Y   +   EA+  F +M+ +G  PNE++L++++ +C+G      G+++H  
Sbjct: 109 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 168

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +K  ++S MF  ++L+DMYAK  N+++A  VF  +   D+VS  A+I+G      ++ A
Sbjct: 169 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 228

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF+Q+ S  +  N  T+T+ + A +G+   + G+Q+H  +++ E+     +   L+DM
Sbjct: 229 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 288

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KCG +  +R +F  M E+++++WN ++ G+ ++G   E  SLF  +++E V  D  TL
Sbjct: 289 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 347

Query: 302 STVLKSVASFQAIGVCKQVHALSVK---TAFESDDYIVNSLIDAYGKCGHVEDAVKIFK- 357
             VL   +    +     +    VK       +  Y    +ID  G+ G +E A+ + + 
Sbjct: 348 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALNLIEN 405

Query: 358 ---ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
              ES+     +       +A   +GE   +  LEM+    N  ++V  S + A A +
Sbjct: 406 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPE--NAGNYVILSNIYAAAGM 461



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 3/395 (0%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M L G         + I AC        GR++H   I   Y   +F    LV MY + G 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L+DA  V   +    +VSW  +I+G    E +  AL LF +M  +   PN +T  + L +
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C+G +    G+Q+H  L+K   +S   VG  L+DMYAK  ++ EAR +F  +PE+++++ 
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +ISG+ Q G D EA  LF  +Y EG+  +  T +T++ +++   ++   KQVHAL ++
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
                   + NSLID Y KCG +  + ++F       +V+  +M+  Y + GLG E + L
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 332

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYA 445
           + ++  +E+ PDS    ++L+ C++    ++G  +   ++K    +  T     ++++  
Sbjct: 333 FKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 391

Query: 446 KCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
           + G ++ A      +P     S W +++G    H 
Sbjct: 392 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 426



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 141/263 (53%), Gaps = 8/263 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C+  + ++ G QVH ++V T F+S  FV +SL+ MYAK  N  ++RR+FD +PER 
Sbjct: 149 VLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS  ++ S Y      EEA+  F+++   G++ N  + ++++ A +G      G+++H 
Sbjct: 209 VVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHA 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++      +   N+L+DMY+K G L  +  VF ++    +VSWNA++ G   H     
Sbjct: 269 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 328

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF+ +   E+ P+  T  + L  C+   L + G  +  +++K   +   ++  G   
Sbjct: 329 VISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYG 384

Query: 238 -LVDMYAKCGSMDEARMIFHLMP 259
            ++D+  + G +++A  +   MP
Sbjct: 385 CIIDLLGRSGRLEKALNLIENMP 407


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/708 (35%), Positives = 395/708 (55%), Gaps = 66/708 (9%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++F+ N+L+ M+AK G L DA  VF ++   D VSW  ++ G         A+K    M 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG--- 246
           +    P  FT T+ L +CA  +   +GR++H  ++K+ + S   V   +++MY KCG   
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216

Query: 247 ----------------------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
                                        MD A  +F  MP++++++WN +I+G+ QNG 
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276

Query: 279 DMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           D +A  LF  M  E  +  D+ T+++VL + A+   + + KQVHA  ++T    +  + N
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDL--------------------------------- 364
           +LI  Y K G VE+A +I  +S   DL                                 
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           VA T+MI  Y Q G  +EA+ L+  M      P+S+  +++L+ CA+L+  + GKQ+H  
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKE 483
            I+      +   N+++ MYA+ GS   A R F ++  R   ++W++MI  LAQHG+G+E
Sbjct: 457 AIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+ +F +ML  GV P+ IT V VL AC+HAG V E K +++ ++ +  I P   HYACM+
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 576

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+L RAG F EA E +  MP + +A  WG+LL A R++KN E+ + AAE L +I+P  S 
Sbjct: 577 DLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 636

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +  ++N+Y++ G W + A++ +  K+  ++KE G SW  ++ K++ F   D  H +   
Sbjct: 637 AYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDA 696

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           +YA    + + +  AG+VP +++ LHDV++  KE+LL  HSEKLA+AFGLI+TP   T+R
Sbjct: 697 VYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLR 756

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V KNLR+C DCH + + ISK+  REIIVRD  RFHHFR+G CSC  YW
Sbjct: 757 VMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 244/516 (47%), Gaps = 68/516 (13%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  NSL+ M+AK G   D+R +F  +PER  VSW  +           EA+    +M   
Sbjct: 99  FTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD 158

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G  P +F+L++++++CA +    +GRK+H + +KLG  S +  AN++++MY K G+ E A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETA 218

Query: 151 VAVFKDI-----------------------------EHPD--IVSWNAVIAGCVLHEHND 179
             VF+ +                               PD  IVSWNA+IAG   +  + 
Sbjct: 219 TTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDA 278

Query: 180 WALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            ALKLF +M   S + P+ FT TS L ACA +    +G+Q+H  +++ E+  +  V   L
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338

Query: 239 VDMYAKCGS---------------------------------MDEARMIFHLMPEKNLIA 265
           +  YAK GS                                 M+ AR +F +M  ++++A
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVA 398

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W  +I G+ QNG + EA  LF  M   G   +  TL+ VL   AS   +   KQ+H  ++
Sbjct: 399 WTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAI 458

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEAL 384
           ++  E    + N++I  Y + G    A ++F +     + +  TSMI A AQ G GEEA+
Sbjct: 459 RSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAV 518

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNM 443
            L+ EM    + PD      +L+AC++     +GK+ +  I     ++   +  + +V++
Sbjct: 519 GLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDL 578

Query: 444 YAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            A+ G   +A      +P +   ++W +++     H
Sbjct: 579 LARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 614



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 233/531 (43%), Gaps = 100/531 (18%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN--------------- 45
           VL +C   +   +G +VH  VV  G  S   VANS++ MY KCG+               
Sbjct: 170 VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 229

Query: 46  ---------------FID-SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                           +D +  LF+++P+RS+VSWN++ + Y       +A+  F  M+ 
Sbjct: 230 VSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 289

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDS----------------- 129
            S + P+EF+++S+++ACA  G+  +G+++H Y ++  + Y+S                 
Sbjct: 290 ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVE 349

Query: 130 --------------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                         ++ S  AL++ Y K+G++E A  +F  + + D+V+W A+I G   +
Sbjct: 350 NARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQN 409

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             ND A+ LF+ M +    PN +T  + L  CA +   + G+Q+HC  I+  ++    V 
Sbjct: 410 GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVS 469

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             ++ MYA+ GS   AR +F  +   K  I W  +I    Q+G   EA  LF  M R GV
Sbjct: 470 NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV 529

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T   VL + +           HA  V       D I N                 
Sbjct: 530 EPDRITYVGVLSACS-----------HAGFVNEGKRYYDQIKN----------------- 561

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
             +   A ++     M+   A+ GL  EA +    M    + PD+    SLL+AC     
Sbjct: 562 --EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKN 616

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            E  +     ++     +++ A +++ N+Y+ CG   DA R +    ++ +
Sbjct: 617 AELAELAAEKLLSID-PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 49/240 (20%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMS------------------------------ 432
           + LL  C   +    G+ +H   +K G ++                              
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 433 -------DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
                  + F  NSL++M+AK G + DA   F+E+P+R  VSW+ M+ GL + GR  EA+
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAI 149

Query: 486 QMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           +    M  DG  P   TL +VL  CA   AG V    H F     K G+         ++
Sbjct: 150 KTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVV---KLGLGSCVPVANSVL 206

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ-HAAEMLFAIEPEKS 602
           ++ G+ G  + A  + + MP ++  S W A+     +  N  +G+   AE LF   P++S
Sbjct: 207 NMYGKCGDSETATTVFERMPVRS-VSSWNAM-----VSLNTHLGRMDLAESLFESMPDRS 260


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/508 (46%), Positives = 339/508 (66%)

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I G ++ G + +A S F  M    +  D+ TL +VL S AS + +     VH L
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            +KT FE+   + N+LID Y K G ++ A+ +F +    D+V+ TS++T Y+  G  EEA
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           +KL+ +M+   + PD    +S+L+ACA L+  + G+Q+H  ++K G  S     NSLV M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCGSI DA+RAF  +P R ++SW+A+I G AQ+GRGK +LQ + QM+  G  P++IT 
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           + +L AC+H GL+   + +FE+M+K +GI+P  EHYACMID+LGR+GK  EA  L++ M 
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
              +A VW ALL A R++K +E+G+ AA+ LF +EP  S  +V+LSN+Y++AG W++ A+
Sbjct: 307 VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +RR M+   + KEPG SWIE   KV TF   DR+H    EIY+K+DE+  L+ +AGYVP 
Sbjct: 367 IRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPD 426

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
           +   LHD ++  KE  L +HSEKLAVAFGL+  P GA IR+ KNLR+C DCHT+ ++ SK
Sbjct: 427 MSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSK 486

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + +R II+RD N FHHF  G CSCG YW
Sbjct: 487 VYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 200/411 (48%), Gaps = 45/411 (10%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           +E  D VSWN++I GCV     + AL  FQ+M+S ++  + +T  S L + A M++ +  
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
             +HC +IK   ++  +V   L+DMYAK G +D A M+F  M +K++++W  +++G+  N
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA  LF  M   GV  DQ  +++VL + A    +   +Q+HA  VK+  ES   + 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           NSL+  Y KCG + DA + F      D+++ T++I  YAQ G G+ +L+ Y +M      
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD      LL AC++      G+                               +  D+ 
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGR----------------------------AYFEAMDKV 272

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN-HAGL 515
           +   P  G   ++ MI  L + G+  EA  +  QM+   V P+ +   ++L AC  H  L
Sbjct: 273 YGIKP--GPEHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAACRVHKEL 327

Query: 516 -VAE--AKHHFESMEKKFGIQPMQE-HYACMIDILGRAGKFQEAMELVDTM 562
            + E  AK+ FE       ++PM    Y  + ++   AGK+++A  +   M
Sbjct: 328 ELGEMAAKNLFE-------LEPMNSMPYVMLSNMYSAAGKWEDAARIRRLM 371



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 34/404 (8%)

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWNSL    V   F E+A+ FF++M    ++ +E++L S++N+ A          +H  
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            IK G+++     NAL+DMYAK G L+ A+ VF  +   D+VSW +++ G   +   + A
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +KLF +M+ S + P+     S L ACA + + + G+Q+H +L+K  ++S   V   LV M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCGS+ +A   F  MP +++I+W  +I G+ QNG    +   +  M   G   D  T 
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             +L + +    +G        S +  FE+ D                    K++     
Sbjct: 247 IGLLFACSHNGLLG--------SGRAYFEAMD--------------------KVYGIKPG 278

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            +  AC  MI    + G   EA  L  +M    + PD+ V  +LL AC      E G+  
Sbjct: 279 PEHYAC--MIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAACRVHKELELGEMA 333

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
             ++ +   M ++     L NMY+  G  +DA R    +  RGI
Sbjct: 334 AKNLFELEPM-NSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGI 376



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 159/292 (54%), Gaps = 6/292 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +  S K +   + VH +++ TGF++ + V N+L+ MYAK G    +  +F  + ++ 
Sbjct: 47  VLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKD 106

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL + Y H    EEA+  F +M +SG+ P++ +++S+++ACA       G++IH 
Sbjct: 107 VVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHA 166

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G +S +   N+LV MYAK G++ DA   F ++   D++SW A+I G   +     
Sbjct: 167 TLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKH 226

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           +L+ + QM ++   P+  T+   L AC+   L   GR    ++ K+  IK  P     ++
Sbjct: 227 SLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMI 286

Query: 240 DMYAKCGSMDEAR-MIFHLMPEKNLIAWNIVISG---HLQ-NGGDMEAASLF 286
           D+  + G + EA+ ++  ++   + + W  +++    H +   G+M A +LF
Sbjct: 287 DLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLF 338



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 21/323 (6%)

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           D V+  S+I    + G  E+AL  + +M+ R++  D +   S+LN+ A++   +    VH
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
             IIK GF +     N+L++MYAK G +D A   FS++ D+ +VSW++++ G + +G  +
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EA+++F +M   GV P+ I + SVL AC     V +      +   K G++        +
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAEL-TVMDFGQQIHATLVKSGLESSLSVDNSL 183

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           + +  + G   +A    D MP +   S    ++G A+  +     Q   +M+        
Sbjct: 184 VTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDY 243

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
            T + L    +  G+  +                 G ++ E  DKVY    G   +A   
Sbjct: 244 ITFIGLLFACSHNGLLGS-----------------GRAYFEAMDKVYGIKPGPEHYACMI 286

Query: 663 EIY---AKLDEVSDLLNKAGYVP 682
           ++     KL E   LLN+    P
Sbjct: 287 DLLGRSGKLAEAKGLLNQMVVAP 309


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/664 (38%), Positives = 384/664 (57%), Gaps = 39/664 (5%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           +Y+ +  L D++ +F  I  P  ++W +VI     H     +L  F  M +S + P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG------------- 246
           + S LK+CA +    LG  LH  +I++ +  D   G  L++MY+K               
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 247 -------------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                              S D  R IF +MPEK+L++WN +I+G+ +NG   E   +  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M    +  D  TLS+VL  +A    I   K++H  S++   ++D Y+ +SLID Y KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            V D+ ++F   +  D ++  S+I    Q GL +E L+ + +M   +I P S+  SS++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           ACA+L+    GKQ+H +I + GF  + F  +SLV+MYAKCG+I  A + F  +  R +VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           W+AMI G A HG+  +A+++F QM  +G+        +VL AC+H GLV EA  +F SM 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGI-------KAVLTACSHGGLVDEAWKYFNSMT 461

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           + FGI P  EHYA + D+LGRAG+ +EA + +  M      S+W  LL A R++KN+++ 
Sbjct: 462 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMA 521

Query: 588 QHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDK 647
           +  A  +  ++P  +  ++LL+NIY++A  W   AK R  M+   ++K P  SWIEVK+K
Sbjct: 522 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 581

Query: 648 VYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKL 707
           VY F  GD SH   ++I   ++ + +L+ K GYVP      HDVEE +K+ L+  HSE+L
Sbjct: 582 VYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERL 641

Query: 708 AVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           A+ FG+I TP G TIRV KNLR+C DCHT+ +FISKIV REI+VRD +RFHHF+NG+CSC
Sbjct: 642 AIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSC 701

Query: 768 GGYW 771
           G YW
Sbjct: 702 GDYW 705



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 176/326 (53%), Gaps = 32/326 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK-------------CGNFI 47
           VLK+C    DL LG  +HG ++  G D D +  N+L+ MY+K              G   
Sbjct: 112 VLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVF 171

Query: 48  DS-------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D                    R++F+ +PE+ +VSWN++ +        EE +   +EM 
Sbjct: 172 DEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMG 231

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            + ++P+ F+LSS++   A + D   G++IHG SI+ G D+D++ A++L+DMYAK   + 
Sbjct: 232 GANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVA 291

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           D+  VF  +   D +SWN++IAGCV +   D  L+ F+QM  ++I P  ++++S + ACA
Sbjct: 292 DSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACA 351

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +    LG+QLH  + +     +  +   LVDMYAKCG++  A+ IF  M  +++++W  
Sbjct: 352 HLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTA 411

Query: 269 VISGHLQNGGDMEAASLFPWMYREGV 294
           +I G   +G   +A  LF  M  EG+
Sbjct: 412 MIMGCALHGQAPDAIELFEQMETEGI 437



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 197/397 (49%), Gaps = 32/397 (8%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           +Y+      DS RLF+ I     ++W S+  CY       +++  F  M+ SG+ P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA-------- 150
             S++ +CA   D  LG  +HGY I++G D D+++ NAL++MY+K+  LE++        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 151 ------------------------VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
                                     +F+ +   D+VSWN +IAG   +   +  L++ +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M  + + P+ FT +S L   A       G+++H   I+  + +D  V   L+DMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            + ++  +F L+ E++ I+WN +I+G +QNG   E    F  M    +     + S+++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + A    + + KQ+H    +  F+ + +I +SL+D Y KCG++  A +IF      D+V+
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            T+MI   A  G   +A++L+ +M+   I      CS
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKAVLTACS 445



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 34/407 (8%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+    ++ +   +QLH  ++K +  S       L+ +Y+    + ++  +F+ +     
Sbjct: 13  LRNPLSIKSRSQAQQLHAQVLKFQASSL-CNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           +AW  VI  +  +G   ++   F  M   G+  D     +VLKS A    + + + +H  
Sbjct: 72  LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131

Query: 324 SVKTAFESDDYIVNSLIDAYGK-------------CGHV------------------EDA 352
            ++   + D Y  N+L++ Y K              G V                  ED+
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191

Query: 353 V-KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           V KIF+     DLV+  ++I   A+ GL EE L++  EM    + PDSF  SS+L   A 
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
                +GK++H   I+ G  +D +  +SL++MYAKC  + D+ R F+ + +R  +SW+++
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G  Q+G   E L+ F QML   + P   +  S++ AC H   +   K        + G
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK-QLHGYITRNG 370

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
                   + ++D+  + G  + A ++ D M  +   S    ++G A
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 35/243 (14%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA-YGKCGHVEDAVKIF 356
           +  +  +L++  S ++    +Q+HA  +K  F++      SL+ + Y     + D++++F
Sbjct: 6   EALVKALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLF 63

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                   +A  S+I  Y   GL  ++L  ++ M    + PD  V  S+L +CA L    
Sbjct: 64  NTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLN 123

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA-------------------- 456
            G+ +H +II+ G   D + GN+L+NMY+K   ++++ R                     
Sbjct: 124 LGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRT 183

Query: 457 ------------FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
                       F  +P++ +VSW+ +I G A++G  +E L+M  +M    + P+  TL 
Sbjct: 184 VSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLS 243

Query: 505 SVL 507
           SVL
Sbjct: 244 SVL 246


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 285/757 (37%), Positives = 438/757 (57%), Gaps = 12/757 (1%)

Query: 24   TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
            +GF  D +V+++LV  +A+ G   D++ +F+ +  R+VVS N L    V     E A   
Sbjct: 311  SGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 370

Query: 84   FKEMV-LSGIRPNEFS--LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVD 139
            F EM  L GI  + +   LS+             GR++H + I+ G  D+ +   N LV+
Sbjct: 371  FHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 430

Query: 140  MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
            MYAK G + DA +VF+ +   D VSWN++I+G   +E ++ A + F +M+ +   P+ FT
Sbjct: 431  MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFT 490

Query: 200  YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
              S L +CA +    LG Q+HC  +K+ + +D  V   L+ +YA+ G   E   +F LMP
Sbjct: 491  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550

Query: 260  EKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            E + ++WN VI     +   + +A   F  M R G G  + T   +L +V+S     V  
Sbjct: 551  EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 610

Query: 319  QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQF 377
            Q+HAL +K     D  I N+L+  YGKCG + +  KIF + S   D V+  SMI+ Y   
Sbjct: 611  QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 670

Query: 378  GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
             L  +A+ L   M  +    DSF  +++L+ACA+++  E+G +VH   I+    SD   G
Sbjct: 671  ELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG 730

Query: 438  NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            ++LV+MY+KCG ID A R F  +P R + SW++MI G A+HG G++AL++F +M+ DG  
Sbjct: 731  SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 790

Query: 498  PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            P+H+T V VL AC+H G V E   HF+SM + + + P  EH++CM+D+LGRAGK  E  +
Sbjct: 791  PDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGD 850

Query: 558  LVDTMPFQANASVWGALLGAA--RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
             +++MP + N  +W  +LGA      +N E+G+ AAEML  +EP+ +  +VLL+N+YAS 
Sbjct: 851  FINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASG 910

Query: 616  GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
              W++VAK R  MK+  +KKE G SW+ +KD V+ F  GD+ H     IY KL E++  +
Sbjct: 911  EKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKM 970

Query: 676  NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
              AGY+P  +  L D+E   KE+LL +HSEK+AVAF ++       IR+ KNLR+C DCH
Sbjct: 971  RDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCH 1029

Query: 736  TSFEFISKIV--SREIIVRDVNRFHHFRNGSCSCGGY 770
            ++F +ISKI+    ++ ++  N     R   C CG +
Sbjct: 1030 SAFGYISKIIFFFLKMAMKPSNNI-WIRRQQCPCGDW 1065



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 268/496 (54%), Gaps = 21/496 (4%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +  S+IN   GS  S   R++H  SIK G+  ++F +N L+++Y ++G+L  A  +F ++
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKEL 215
            + ++V+W  +I+G   +   D A   F+ M  +   PN + + SAL+AC  +G    +L
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           G Q+H  + K    SD +V   L+ MY  C  S ++AR +F  +  +N I+WN +IS + 
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252

Query: 275 QNGGDMEAASLFPWMYREGVGF----DQTTLSTVLKSVASFQAIGVC--KQVHALSVKTA 328
           + G  + A  LF  M +EG+GF    ++ T  +++ +  S    G+C  +Q+ A   K+ 
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSG 312

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F  D Y+ ++L+  + + G  +DA  IF++    ++V+   ++    +   GE A K++ 
Sbjct: 313 FLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFH 372

Query: 389 EMQDR-EINPDSFVCSSLLNACANLSAYEQ----GKQVHVHIIKFGFMSDTFA-GNSLVN 442
           EM+D   IN DS+V   LL+A +  S  E+    G++VH H+I+ G   +  A GN LVN
Sbjct: 373 EMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 430

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MYAK G+I DA   F  + ++  VSW+++I GL Q+   ++A + F +M   G +P++ T
Sbjct: 431 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFT 490

Query: 503 LVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           L+S L +C   G +   +  H + +  K G+         ++ +    G F E +++   
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGL--KLGLDTDVSVSNALLALYAETGCFTECLKVFSL 548

Query: 562 MPFQANASVWGALLGA 577
           MP + +   W +++GA
Sbjct: 549 MP-EYDQVSWNSVIGA 563



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 172/600 (28%), Positives = 300/600 (50%), Gaps = 30/600 (5%)

Query: 2   LKAC--TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLFDAIPE 58
           L+AC  +      LG+Q+HG++  T + SD  V N L+ MY  C +   D+R +FD I  
Sbjct: 179 LRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGI 238

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI----RPNEFSLSSMINACAGSGDSLL 114
           R+ +SWNS+ S Y        A   F  M   G+    +PNE++  S+I     S D  L
Sbjct: 239 RNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGL 298

Query: 115 G--RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
               ++     K G+  D++ ++ALV  +A+ G  +DA  +F+ +   ++VS N ++ G 
Sbjct: 299 CVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGL 358

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM----ELKELGRQLHCSLIKMEI 228
           V  +  + A K+F +MK   +  N  +Y   L A +      E +  GR++H  +I+  +
Sbjct: 359 VKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGL 417

Query: 229 KSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
             + + +G GLV+MYAK G++ +A  +F LM EK+ ++WN +ISG  QN    +AA  F 
Sbjct: 418 NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFH 477

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M R G      TL + L S AS   I + +Q+H   +K   ++D  + N+L+  Y + G
Sbjct: 478 RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 537

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLG-EEALKLYLEMQDREINPDSFVCSSLL 406
              + +K+F      D V+  S+I A +       +A+K +L+M             ++L
Sbjct: 538 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINIL 597

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGI 465
           +A ++LS +E   Q+H  ++K+    DT  GN+L++ Y KCG +++ ++ F+ + + R  
Sbjct: 598 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 657

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW++MI G   +    +A+ +   M++ G   +  T  ++L AC     +         
Sbjct: 658 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG------ 711

Query: 526 ME-KKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
           ME    GI+   E      + ++D+  + G+   A    + MP + N   W +++ G AR
Sbjct: 712 MEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYAR 770



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 282/579 (48%), Gaps = 21/579 (3%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H   +  GF  + F++N+L+ +Y + G+   +++LFD +  R++V+W  L S Y    
Sbjct: 92  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 151

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS--LLGRKIHGYSIKLGYDSDMFS 133
             +EA   F++MV +G  PN ++  S + AC  SG S   LG +IHG   K  Y SD+  
Sbjct: 152 KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVV 211

Query: 134 ANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW--ALKLFQQMKS 190
            N L+ MY   + +  DA +VF  I   + +SWN++I+  V     D   A  LF  M+ 
Sbjct: 212 CNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS--VYSRRGDAVSAYDLFSSMQK 269

Query: 191 S----EINPNMFTYTSAL-KACAGMELKE-LGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
                   PN +T+ S +  AC+ ++    +  Q+   + K     D  V   LV  +A+
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G  D+A+ IF  M  +N+++ N ++ G ++      AA +F  M ++ VG +  +   +
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVL 388

Query: 305 LKSVASFQAI----GVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKES 359
           L + + F  +       ++VHA  ++T    +   + N L++ Y K G + DA  +F+  
Sbjct: 389 LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 448

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D V+  S+I+   Q    E+A + +  M+     P +F   S L++CA+L     G+
Sbjct: 449 VEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGE 508

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA-QH 478
           Q+H   +K G  +D    N+L+ +YA+ G   +  + FS +P+   VSW+++IG L+   
Sbjct: 509 QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSE 568

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
               +A++ F QM+  G   + +T +++L A +   L  E  H   ++  K+ +      
Sbjct: 569 ASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAI 627

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              ++   G+ G+  E  ++   M    +   W +++  
Sbjct: 628 GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 666



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 226/488 (46%), Gaps = 51/488 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L +C S   + LG Q+H   +  G D+D  V+N+L+ +YA+ G F +  ++F  +PE  
Sbjct: 494 TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 553

Query: 61  VVSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VSWNS+       +  + +AV +F +M+  G   +  +  ++++A +      +  +IH
Sbjct: 554 QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 613

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHE-- 176
              +K     D    NAL+  Y K G + +   +F  + E  D VSWN++I+G + +E  
Sbjct: 614 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 673

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H    L  F   K   ++   FT+ + L ACA +   E G ++H   I+  ++SD +VG 
Sbjct: 674 HKAMDLVWFMMQKGQRLDS--FTFATILSACASVATLERGMEVHACGIRACLESDVVVGS 731

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMY+KCG +D A   F LMP +N+ +WN +ISG+ ++G   +A  LF  M  +G   
Sbjct: 732 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 791

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  T   VL + +           H   V+  FE                 H +   +++
Sbjct: 792 DHVTFVGVLSACS-----------HVGFVEEGFE-----------------HFKSMSEVY 823

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSA 414
           + S  V+  +C  M+    + G  +E       M    + P+  +  ++L AC  AN   
Sbjct: 824 RLSPRVEHFSC--MVDLLGRAGKLDEVGDFINSM---PMKPNVLIWRTVLGACCRANGRN 878

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VS 467
            E G++    +++   +    A N   L NMYA     +D  +A + + +  +      S
Sbjct: 879 TELGRRAAEMLLE---LEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCS 935

Query: 468 WSAMIGGL 475
           W  M  G+
Sbjct: 936 WVTMKDGV 943


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 293/783 (37%), Positives = 443/783 (56%), Gaps = 37/783 (4%)

Query: 1   VLKACT-SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V  AC+ ++ D+ L  Q+   +  +GF +D FV + LV  +AK G+ I +R++F+ +  R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETR 272

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFS--LSSMINACAGSGDSL-LG 115
           + V+ N L    V   + EEA   F +M  +  + P  +   LSS           L  G
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332

Query: 116 RKIHGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           R++HG+ I  G    M    N LV+MYAK G++ DA  VF  +   D VSWN++I G   
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQ 392

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +     A++ +Q M+  EI P  FT  S++ +CA ++  +LG+Q+H   +K+ I  +  V
Sbjct: 393 NSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSV 452

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREG 293
              L+ +YA+ G ++E R IF  MPE + ++WN +I     +   + EA + F    R G
Sbjct: 453 SNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAG 512

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              ++ T S+VL +V+S     + KQ+H L++K     +    N+LI  YGKCG ++   
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCE 572

Query: 354 KIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           KIF + S   D V   SMI+ Y    L  +AL L   M       DSF+ +++L+A A++
Sbjct: 573 KIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASV 632

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +  E+G +VH   ++    SD   G++LV+MY+KCG +D A R F+ +P           
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP----------- 681

Query: 473 GGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
                         +F  M  DG   P+H+T V VL AC+HAGL+ E   HFESM   +G
Sbjct: 682 --------------LFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 727

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA--RIYKNVEVGQH 589
           + P  EH++CM D+LGRAG+  +  + ++ MP + N  +W  +LGA      +  E+G+ 
Sbjct: 728 LAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 787

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           AAEMLF +EPE +  +VLL N+YA+ G W+++ K R+ MKD  +KKE G SW+ +KD V+
Sbjct: 788 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 847

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F  GD+SH  +  IY KL E++  +  AGYVP     L+D+E+  KE++L +HSEKLAV
Sbjct: 848 MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAV 907

Query: 710 AFGLIATPPGA-TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           AF L A       IR+ KNLR+C DCH++F+ ISKI  R+II+RD NRFHHF++G CSC 
Sbjct: 908 AFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCS 967

Query: 769 GYW 771
            +W
Sbjct: 968 DFW 970



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 169/572 (29%), Positives = 280/572 (48%), Gaps = 18/572 (3%)

Query: 18  HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           H  +   G + D ++ N+L+  Y + G+ + +R++FD +P R+ VSW  + S Y      
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACA--GSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           +EA+ F ++MV  G+  N ++  S + AC    S   L GR+IHG   KL Y  D   +N
Sbjct: 84  KEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSN 143

Query: 136 ALVDMYAKVG-NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
            L+ MY K G +L  A+  F D++  + VSWN++I+         +A K+F  M+     
Sbjct: 144 VLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSR 203

Query: 195 PNMFTYTSALK-ACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           P  +T+ S +  AC+  E    L  Q+ C++ K    +D  VG GLV  +AK GS+  AR
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHAR 263

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF- 311
            IF+ M  +N +  N ++ G ++     EA  LF  M    +     +   +L S   + 
Sbjct: 264 KIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYS 322

Query: 312 --QAIGVCK--QVHALSVKTAFESDDYIV---NSLIDAYGKCGHVEDAVKIFKESSAVDL 364
             + +G+ K  +VH   + T     D++V   N L++ Y KCG + DA ++F   +  D 
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDS 380

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V+  SMIT   Q     EA++ Y  M+  EI P SF   S +++CA+L   + G+Q+H  
Sbjct: 381 VSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGE 440

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG-KE 483
            +K G   +    N+L+ +YA+ G +++  + FS +P+   VSW+++IG LA   R   E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE 500

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+  F   L  G   N IT  SVL A +      E       +  K+ I         +I
Sbjct: 501 AVACFLNALRAGQKLNRITFSSVLSAVSSLSF-GELGKQIHGLALKYNIADEATTENALI 559

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              G+ G+     ++   M  + +   W +++
Sbjct: 560 ACYGKCGEMDGCEKIFSRMSERRDDVTWNSMI 591



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 165/588 (28%), Positives = 282/588 (47%), Gaps = 23/588 (3%)

Query: 2   LKACTSKKD--LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAIPE 58
           L+AC       +  G Q+HG++    +  D  V+N L+ MY KCG  +  + R FD +  
Sbjct: 109 LRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQV 168

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI-NACA-GSGDSLLGR 116
           ++ VSWNS+ S Y        A   F  M   G RP E++  S++  AC+    D  L  
Sbjct: 169 KNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +I     K G+ +D+F  + LV  +AK G+L  A  +F  +E  + V+ N ++ G V  +
Sbjct: 229 QIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQK 288

Query: 177 HNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKE-----LGRQLHCSLIKMEIKS 230
             + A KLF  M S  +++P   +Y   L +     L E      GR++H  +I   +  
Sbjct: 289 WGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-V 345

Query: 231 DPIVGV--GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
           D +VG+  GLV+MYAKCGS+ +AR +F  M EK+ ++WN +I+G  QN   +EA   +  
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQS 405

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M R  +     TL + + S AS +   + +Q+H  S+K   + +  + N+L+  Y + G 
Sbjct: 406 MRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGC 465

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLG-EEALKLYLE--MQDREINPDSFVCSSL 405
           + +  KIF      D V+  S+I A A       EA+  +L      +++N  +F     
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLS 525

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RG 464
             +  +    E GKQ+H   +K+    +    N+L+  Y KCG +D  ++ FS + + R 
Sbjct: 526 AVSSLSFG--ELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRD 583

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
            V+W++MI G   +    +AL +   M++ G   +     +VL A      + E      
Sbjct: 584 DVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATL-ERGMEVH 642

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           +   +  ++      + ++D+  + G+   A+   +TMP  AN  + G
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPLFANMKLDG 690



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 4/300 (1%)

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
           G  K  H+   K   E D Y+ N+LI+AY + G    A K+F E    + V+   +++ Y
Sbjct: 18  GAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGY 77

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ--GKQVHVHIIKFGFMS 432
           ++ G  +EAL    +M    +  + +   S L AC  L +     G+Q+H  + K  +  
Sbjct: 78  SRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAV 137

Query: 433 DTFAGNSLVNMYAKC-GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           D    N L++MY KC GS+  A RAF ++  +  VSW+++I   +Q G  + A +MF  M
Sbjct: 138 DAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSM 197

Query: 492 LEDGVLPNHITLVS-VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
             DG  P   T  S V  AC+                +K G        + ++    ++G
Sbjct: 198 QCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSG 257

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
               A ++ + M  +   ++ G ++G  R     E  +   +M   I+    S  +LLS+
Sbjct: 258 SLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/808 (34%), Positives = 446/808 (55%), Gaps = 39/808 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+  T   D  L   VH    F   + D F+ N+L+  Y K G   D+ ++F  +   +
Sbjct: 103 LLRLSTRYGDPDLARAVHA--QFLKLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPN 160

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS+ +L S +   D+ +EAV  F  M+ SGI PNE++  +++ AC  + D  LG ++HG
Sbjct: 161 VVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHG 220

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +KLG  S +F  NAL+ +Y K G L+  + +F+++   DI SWN VI+  V     D 
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A   F+ M+  + +  + F+ ++ L ACAG      G+QLH   +K+ ++S   V   L+
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340

Query: 240 DMYAKCGS-------------------------------MDEARMIFHLMPEKNLIAWNI 268
             Y KCGS                               +D A  +F+ MP++N I++N 
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           V++G  +N     A  LF  M  EGV     TL++++ +    ++  V +Q+    +K  
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD--LVACTSMITAYAQFGLGEEALKL 386
             S+  I  +L+D Y +CG +EDA KIF + S  +      TSMI  YA+ G   EA+ L
Sbjct: 461 ILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISL 520

Query: 387 YLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   Q    I  D  + +S+L+ C ++  +E GKQ+H H +K G +++T  GN+ V+MY+
Sbjct: 521 FHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYS 580

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KC ++DDA R F+ +  + IVSW+ ++ G   H +G +AL ++ +M + G+ P+ IT   
Sbjct: 581 KCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFAL 640

Query: 506 VLCACNHA--GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           ++ A  H    LV   +  F SME +  I+P  EHYA  I +LGR G  +EA + +  MP
Sbjct: 641 IISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMP 700

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            + +  VW ALL + RI KN  + + AA  + A+EP+   +++L SN+Y+++G W    K
Sbjct: 701 LEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEK 760

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           VR  M++   +K P  SWI  ++K+++F   DRSH + K+IY+ L+ +     K GYVP 
Sbjct: 761 VREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPD 820

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
               L +VEE +K++ L++HS KLA  FG++ T PG  I++ KN+R+C DCH   +++S 
Sbjct: 821 TSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSI 880

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  R+I++RD + FH F +G CSC  YW
Sbjct: 881 VTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 17/294 (5%)

Query: 296 FDQTTLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F   +L+T L ++AS          +    + + VHA  +K   E D ++ N+LI AY K
Sbjct: 85  FASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLK 142

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
            G V DA K+F   S  ++V+ T++I+ +++    +EA++L+  M D  I P+ +   ++
Sbjct: 143 LGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAI 202

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L AC     Y+ G QVH  ++K G +S  F  N+L+ +Y KCG +D   R F E+P+R I
Sbjct: 203 LTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDI 262

Query: 466 VSWSAMIGGLAQHGRGKEALQMF-GQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHF 523
            SW+ +I  L +  +  EA   F G  L  G+  +H +L ++L AC  AG V   K    
Sbjct: 263 TSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTAC--AGSVKPMKGQQL 320

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            ++  K G++      + +I    + G   +  +L +TMP + +   W  ++ +
Sbjct: 321 HALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIR-DVITWTGMITS 373


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 293/771 (38%), Positives = 447/771 (57%), Gaps = 22/771 (2%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV--H 73
            QV   V+ +G  SD +V ++LV  +A+ G   +++ +F  + ER+ V+ N L    V  H
Sbjct: 291  QVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQH 350

Query: 74   CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG---SGDSLL-GRKIHGYSIKLGY-D 128
            C   EEAV  F     S +  N  +   +++A A      D L+ GR++HG+ ++ G  D
Sbjct: 351  CS--EEAVGIFMGTRDSFV-VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLID 407

Query: 129  SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
              +  +N LV+MYAK G ++ A  VF+ +   D VSWN +I+    +   + A+  +  M
Sbjct: 408  LKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMM 467

Query: 189  KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
            +   I+P+ F   S L +CA + L   G+Q+HC  +K  +  D  V   LV MY  CG+ 
Sbjct: 468  RQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGAR 527

Query: 249  DEARMIFHLMPEKNLIAWN----IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
             E+  IF+ M E ++++WN    +++S H       E+  +F  M R G+  ++ T   +
Sbjct: 528  SESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTA---ESVEVFSNMMRSGLTPNKVTFVNL 584

Query: 305  LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVD 363
            L +++    + + KQVHA+ +K     D+ + N+L+  Y K G ++   ++F   S   D
Sbjct: 585  LSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRD 644

Query: 364  LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
             V+  SMI+ Y   G  +E +     M       D    S +LNACA+++A E+G ++H 
Sbjct: 645  AVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHA 704

Query: 424  HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
              I+    SD    ++L++MY+KCG ID A + F+ +  +   SW++MI G A+HG G++
Sbjct: 705  FGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEK 764

Query: 484  ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
            AL++F +M  +G  P+H+T VSVL AC+HAGLV     +FE ME   GI P  EHY+C+I
Sbjct: 765  ALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDH-GILPHIEHYSCVI 823

Query: 544  DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN---VEVGQHAAEMLFAIEPE 600
            D+LGRAGK  +  E ++ MP + N  +W  +L A R  K+   +++G+ A+ ML  +EP+
Sbjct: 824  DLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQ 883

Query: 601  KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
                +VL SN YA+ G W++ AK R  M    +KKE G SW+ + D V+TF  GDRSH  
Sbjct: 884  NPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPN 943

Query: 661  SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +KEIY KL+ +   +  AGYVPM E  L+D+EE  KE+LL +HSEKLAVAF L  +    
Sbjct: 944  TKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDV 1003

Query: 721  TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLR+C DCHT+F +IS+IV R+II+RD  RFHHF +G CSCG YW
Sbjct: 1004 PIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 177/618 (28%), Positives = 313/618 (50%), Gaps = 38/618 (6%)

Query: 1   VLKACT-SKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAI 56
           VL+AC  +  DL    +QVHG+V  T + S+  V N+L+ MY  C  G  + ++++FD  
Sbjct: 166 VLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTT 225

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG----IRPNEFSLSSMINACA-GSGD 111
           P R +++WN+L S Y    ++      F  M+       +RPNE +  S+I A +  S  
Sbjct: 226 PVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCS 285

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           S +  ++    +K G  SD++  +ALV  +A+ G L++A  +F +++  + V+ N +I G
Sbjct: 286 SGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVG 345

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE----LGRQLHCSLIKME 227
            V    ++ A+ +F   + S +  N  T+   L A A   + E     GR++H  +++  
Sbjct: 346 LVKQHCSEEAVGIFMGTRDSFV-VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTG 404

Query: 228 IKSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
           +    I +  GLV+MYAKCG++D+A  +F L+  ++ ++WN +IS   QNG   E A + 
Sbjct: 405 LIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGF-CEGAMMN 463

Query: 287 PWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
             M R+G +        + L S AS + +   +QVH  +VK   + D  + N+L+  YG 
Sbjct: 464 YCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGD 523

Query: 346 CGHVEDAVKIFKESSAVDLVACTS----MITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
           CG   ++ +IF   +  D+V+  S    M++++A      E+++++  M    + P+   
Sbjct: 524 CGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTA---ESVEVFSNMMRSGLTPNKVT 580

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
             +LL+A + LS  E GKQVH  ++K G + D    N+L++ YAK G +D  ++ FS + 
Sbjct: 581 FVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMS 640

Query: 462 -DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R  VSW++MI G   +G  +E +     M+    + +  T   VL AC     VA  +
Sbjct: 641 GRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNAC---ASVAALE 697

Query: 521 HHFESMEKKFGIQPMQEH----YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
              E     FGI+   E      + ++D+  + G+   A ++ ++M  Q N   W +++ 
Sbjct: 698 RGMEM--HAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMS-QKNEFSWNSMIS 754

Query: 577 AARIYKNVEVGQHAAEML 594
               Y    +G+ A E+ 
Sbjct: 755 G---YARHGLGEKALEIF 769



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 284/582 (48%), Gaps = 28/582 (4%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H  +V  G   D F++N LV +YAK      +R++FD + ER+ VSW  L S YV   
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 76  FLEEAVCFFKEMVLSG---IRPNEFSLSSMINACAGSGDSLL--GRKIHGYSIKLGYDSD 130
             +EA   FK M+  G    RP  F+  S++ AC  +G  LL    ++HG   K  Y S+
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 131 MFSANALVDMYAK--VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
               NAL+ MY    VG    A  VF      D+++WNA+++      +      LF  M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 189 ----KSSEINPNMFTYTS-----ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
                + E+ PN  T+ S     +L +C+   L     Q+   ++K    SD  VG  LV
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSGVLD----QVFARVLKSGSSSDLYVGSALV 312

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
             +A+ G +DEA+ IF  + E+N +  N +I G ++     EA  +F    R+    +  
Sbjct: 313 SAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF-MGTRDSFVVNTD 371

Query: 300 TLSTVLKSVASFQ----AIGVCKQVHALSVKTAF-ESDDYIVNSLIDAYGKCGHVEDAVK 354
           T   +L +VA F      +   ++VH   ++T   +    + N L++ Y KCG ++ A +
Sbjct: 372 TFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASR 431

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F+   A D V+  ++I+   Q G  E A+  Y  M+   I+P +F   S L++CA+L  
Sbjct: 432 VFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRL 491

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              G+QVH   +K+G   DT   N+LV MY  CG+  ++   F+ + +  IVSW++++G 
Sbjct: 492 LTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGV 551

Query: 475 L-AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           + + H    E++++F  M+  G+ PN +T V++L A +   ++   K     + K   I+
Sbjct: 552 MVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIE 611

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                 A M     ++G      +L  +M  + +A  W +++
Sbjct: 612 DNAVDNALM-SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMI 652



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 247/489 (50%), Gaps = 30/489 (6%)

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
           G+     ++H   +K G   D+F +N LV++YAK   L  A  VF  +   + VSW  ++
Sbjct: 70  GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129

Query: 170 AGCVLHEHNDWALKLFQQM--KSSEIN-PNMFTYTSALKAC--AGMELKELGRQLHCSLI 224
           +G VL    D A ++F+ M  + SE + P  FT+ S L+AC  AG +L     Q+H  + 
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVS 189

Query: 225 KMEIKSDPIVGVGLVDMYAKC--GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           K    S+  V   L+ MY  C  G   +A+ +F   P ++LI WN ++S + + G  +  
Sbjct: 190 KTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVST 249

Query: 283 ASLFPWMYREGVGF-----DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
            +LF  M  +         + T  S +  +  S  + GV  QV A  +K+   SD Y+ +
Sbjct: 250 FTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGS 309

Query: 338 SLIDAYGKCGHVEDAVKIF---KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR- 393
           +L+ A+ + G +++A  IF   KE +AV L     +I    +    EEA+ +++  +D  
Sbjct: 310 ALVSAFARHGMLDEAKDIFINLKERNAVTL---NGLIVGLVKQHCSEEAVGIFMGTRDSF 366

Query: 394 EINPDSFVCSSLLNACANLSAYE----QGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCG 448
            +N D+FV   LL+A A  S  E    +G++VH HI++ G +    A  N LVNMYAKCG
Sbjct: 367 VVNTDTFVV--LLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCG 424

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           +ID A R F  +  R  VSW+ +I  L Q+G  + A+  +  M +  + P++   +S L 
Sbjct: 425 AIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLS 484

Query: 509 ACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
           +C    L+   +  H +++  K+G+         ++ + G  G   E+ E+ ++M  + +
Sbjct: 485 SCASLRLLTAGQQVHCDAV--KWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHD 541

Query: 568 ASVWGALLG 576
              W +++G
Sbjct: 542 IVSWNSIMG 550



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 209/429 (48%), Gaps = 45/429 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C S + L  G QVH   V  G D D  V+N+LV MY  CG   +S  +F+++ E  +
Sbjct: 483 LSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDI 542

Query: 62  VSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSWNS+    V       E+V  F  M+ SG+ PN+ +  ++++A +      LG+++H 
Sbjct: 543 VSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHA 602

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
             +K G   D    NAL+  YAK G+++    +F  +    D VSWN++I+G + + H  
Sbjct: 603 VVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             +     M  S    +  T++  L ACA +   E G ++H   I+ +++SD +V   L+
Sbjct: 663 ETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALL 722

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KCG +D A  +F+ M +KN  +WN +ISG+ ++G   +A  +F  M R G   D  
Sbjct: 723 DMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHV 782

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE--------- 350
           T  +VL + +           HA  V       DY    +++ +G   H+E         
Sbjct: 783 TFVSVLSACS-----------HAGLVDRGL---DYF--EMMEDHGILPHIEHYSCVIDLL 826

Query: 351 -DAVKIFKESSAVD--------------LVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             A K+ K    ++              LVAC        +  LG+EA ++ LE++ +  
Sbjct: 827 GRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDG-DRIDLGKEASRMLLELEPQ-- 883

Query: 396 NPDSFVCSS 404
           NP ++V +S
Sbjct: 884 NPVNYVLAS 892



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 20/320 (6%)

Query: 208 AGMELKELGRQ-----LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           AG+ L   G +     LH  L+K  +  D  +   LV++YAK   +  AR +F  M E+N
Sbjct: 62  AGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERN 121

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT---TLSTVLKSV--ASFQAIGVC 317
            ++W  ++SG++ +G   EA  +F  M  EG  F +    T  +VL++   A    +   
Sbjct: 122 AVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFA 181

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKC--GHVEDAVKIFKESSAVDLVACTSMITAYA 375
            QVH L  KT + S+  + N+LI  YG C  G    A ++F  +   DL+   ++++ YA
Sbjct: 182 VQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYA 241

Query: 376 QFGLGEEALKLYLEM----QDREINPDSFVCSSLLNACANLSAYEQG--KQVHVHIIKFG 429
           + G       L++ M       E+ P+     SL+ A  +LS+   G   QV   ++K G
Sbjct: 242 KKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSG 300

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
             SD + G++LV+ +A+ G +D+A   F  + +R  V+ + +I GL +    +EA+ +F 
Sbjct: 301 SSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF- 359

Query: 490 QMLEDGVLPNHITLVSVLCA 509
               D  + N  T V +L A
Sbjct: 360 MGTRDSFVVNTDTFVVLLSA 379



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 141/278 (50%), Gaps = 14/278 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP-ER 59
           +L A +    L LG QVH +V+  G   D  V N+L+  YAK G+     +LF ++   R
Sbjct: 584 LLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRR 643

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSWNS+ S Y++   L+E +     M+ S    +  + S ++NACA       G ++H
Sbjct: 644 DAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMH 703

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + I+   +SD+   +AL+DMY+K G ++ A  VF  +   +  SWN++I+G   H   +
Sbjct: 704 AFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGE 763

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG------RQLHCSLIKMEIKSDPI 233
            AL++F++M+ +   P+  T+ S L AC+   L + G       + H  L  +E  S   
Sbjct: 764 KALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYS--- 820

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVI 270
               ++D+  + G + + +   + MP K N + W  V+
Sbjct: 821 ---CVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVL 855



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 5/175 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC S   L  G+++H   + +  +SD  V ++L+ MY+KCG    + ++F+++ +++
Sbjct: 686 VLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKN 745

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SWNS+ S Y      E+A+  F+EM  +G  P+  +  S+++AC+ +G  L+ R +  
Sbjct: 746 EFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAG--LVDRGLDY 803

Query: 121 YSI--KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
           + +    G    +   + ++D+  + G L         +   P+ + W  V+  C
Sbjct: 804 FEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVAC 858


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/572 (41%), Positives = 368/572 (64%), Gaps = 1/572 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y +A+ AC        GRQ+H  +I    +    +G  LV MY +CG++D+AR +   MP
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+++++W  +ISG+ Q    +EA  LF  M R G   ++ TL+TVL S +  Q+I   KQ
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VH+L VKT FES  ++ +SL+D Y K  ++++A ++F      D+V+CT++I+ YAQ GL
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL L+ ++    +  +    ++L+ A + L++ + GKQVH  I++          NS
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+KCG +  + R F  + +R +VSW+AM+ G  +HG G E + +F  + ++ V P+
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPD 311

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +TL++VL  C+H GLV E    F+++ K+        HY C+ID+LGR+G+ ++A+ L+
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           + MPF++  S+WG+LLGA R++ NV VG+  A+ L  +EPE +  +V+LSNIYA+AGMW 
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +V KVR+ M +  + KEPG SWI +   ++TF   +R H   K+I AK+ E+   +  AG
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG 491

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP +   LHDV++ +KE++L  HSEKLA+ FGL+ TPPG TIRV KNLRICVDCH   +
Sbjct: 492 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAK 551

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+SK+  REI +RD NRFH   +G+C+CG YW
Sbjct: 552 FVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 222/418 (53%), Gaps = 12/418 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC  ++ L+ G QVH  ++   +    F+   LV MY +CG   D+R + D +PERSV
Sbjct: 17  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ S Y   +   EA+  F +M+ +G  PNE++L++++ +C+G      G+++H  
Sbjct: 77  VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +K  ++S MF  ++L+DMYAK  N+++A  VF  +   D+VS  A+I+G      ++ A
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF+Q+ S  +  N  T+T+ + A +G+   + G+Q+H  +++ E+     +   L+DM
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 256

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KCG +  +R +F  M E+++++WN ++ G+ ++G   E  SLF  +++E V  D  TL
Sbjct: 257 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 315

Query: 302 STVLKSVASFQAIGVCKQVHALSVK---TAFESDDYIVNSLIDAYGKCGHVEDAVKIFK- 357
             VL   +    +     +    VK       +  Y    +ID  G+ G +E A+ + + 
Sbjct: 316 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALNLIEN 373

Query: 358 ---ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
              ES+     +       +A   +GE   +  LEM+    N  ++V  S + A A +
Sbjct: 374 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPE--NAGNYVILSNIYAAAGM 429



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 3/395 (0%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M L G         + I AC        GR++H   I   Y   +F    LV MY + G 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L+DA  V   +    +VSW  +I+G    E +  AL LF +M  +   PN +T  + L +
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C+G +    G+Q+H  L+K   +S   VG  L+DMYAK  ++ EAR +F  +PE+++++ 
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +ISG+ Q G D EA  LF  +Y EG+  +  T +T++ +++   ++   KQVHAL ++
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
                   + NSLID Y KCG +  + ++F       +V+  +M+  Y + GLG E + L
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 300

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYA 445
           + ++  +E+ PDS    ++L+ C++    ++G  +   ++K    +  T     ++++  
Sbjct: 301 FKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 359

Query: 446 KCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
           + G ++ A      +P     S W +++G    H 
Sbjct: 360 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 394



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 141/263 (53%), Gaps = 8/263 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C+  + ++ G QVH ++V T F+S  FV +SL+ MYAK  N  ++RR+FD +PER 
Sbjct: 117 VLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS  ++ S Y      EEA+  F+++   G++ N  + ++++ A +G      G+++H 
Sbjct: 177 VVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHA 236

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++      +   N+L+DMY+K G L  +  VF ++    +VSWNA++ G   H     
Sbjct: 237 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 296

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF+ +   E+ P+  T  + L  C+   L + G  +  +++K   +   ++  G   
Sbjct: 297 VISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYG 352

Query: 238 -LVDMYAKCGSMDEARMIFHLMP 259
            ++D+  + G +++A  +   MP
Sbjct: 353 CIIDLLGRSGRLEKALNLIENMP 375


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/692 (38%), Positives = 405/692 (58%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L++   +      L  A++VF+ I+ P+++ WN +  G 
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      AL L+  M S  + PN +T+   LK+CA  +    G+Q+H  ++K+    D 
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
            V   L+ MY + G +++AR +F                                 +P K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN +ISG+ + G + EA  LF  M +  V  D++T+ +V+ + A   +I + +QVH
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +      F S+  IVN+LID Y KCG VE A  +F+  S  D+++  ++I  Y    L +
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
           EAL L+ EM     +P+     S+L ACA+L A E G+ +HV+I K   G  + +    S
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG I+ A + F  I +R + SW+AMI G A HGR   A  +F +M ++ + P+
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V +L AC+H+G++   +H F SM++ + I P  EHY CMID+LG +G F+EA E++
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           +TM  + +  +W +LL A +++ NVE+G+  A+ L  IEP+   ++VLLSNIYA+AG W+
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            VAK+R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL +AG
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 603

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + +
Sbjct: 604 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 663

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 664 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 234/502 (46%), Gaps = 75/502 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK+C   K    G Q+HG V+  G+D D +V  SL+ MY + G   D+R+         
Sbjct: 94  LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 +FD IP + VVSWN++ S Y      +EA+  FKEM+ 
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + +RP+E ++ S+++ACA S    LGR++H +    G+ S++   NAL+D+Y K G +E 
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S  +PN  T  S L ACA 
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   E+GR +H  + K    + +       L+DMYAKCG ++ A+ +F  +  ++L +WN
Sbjct: 334 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 393

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    A  +F  M +  +  D  T   +L + +    + + + +       
Sbjct: 394 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI------- 446

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F S  +DY +   ++ YG                         MI      GL +EA +
Sbjct: 447 -FRSMKEDYKITPKLEHYG------------------------CMIDLLGHSGLFKEAEE 481

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNM 443
           +   M   E+ PD  +  SLL AC      E G+    ++IK   +     G+   L N+
Sbjct: 482 MINTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIK---IEPKNPGSYVLLSNI 535

Query: 444 YAKCGSIDDADRAFSEIPDRGI 465
           YA  G  ++  +  + + D+G+
Sbjct: 536 YATAGRWNEVAKIRALLNDKGM 557



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 254/579 (43%), Gaps = 73/579 (12%)

Query: 17  VHGIVVFTGFDSDEFVANSLV---VMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           +H  ++ TG  +  +  + L+   V+         +  +F+ I E +++ WN++F  +  
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                 A+  +  M+  G+ PN ++   ++ +CA S     G++IHG+ +KLGYD D++ 
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEH-------------------------------PDI 162
             +L+ MY + G LEDA  VF    H                                D+
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           VSWNA+I+G     +N  AL+LF++M  + + P+  T  S + ACA     ELGRQ+H  
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           +      S+  +   L+D+Y KCG ++ A  +F  +  K++I+WN +I G+       EA
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK--TAFESDDYIVNSLI 340
             LF  M R G   +  T+ ++L + A   AI + + +H    K      +      SLI
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           D Y KCG +E A ++F       L +  +MI  +A  G    A  ++  M+  EI PD  
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
               LL+AC++    + G+ +      F  M + +     +  Y                
Sbjct: 426 TFVGLLSACSHSGMLDLGRHI------FRSMKEDYKITPKLEHYG--------------- 464

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
                     MI  L   G  KEA +M   M  +   P+ +   S+L AC   G V   +
Sbjct: 465 ---------CMIDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELGE 512

Query: 521 HHFESMEKKFGIQPMQE-HYACMIDILGRAGKFQEAMEL 558
            + +++ K   I+P     Y  + +I   AG++ E  ++
Sbjct: 513 SYAQNLIK---IEPKNPGSYVLLSNIYATAGRWNEVAKI 548


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/693 (38%), Positives = 400/693 (57%), Gaps = 38/693 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDM---YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L+++         L  A++VF+ I+ P+++ WN +  G 
Sbjct: 50  RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      ALKL+  M S  + PN +T+   LK+CA  +  + G+Q+H  ++K+    D 
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
            V   L+ +Y + G +++AR +F                                 +P K
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN +ISG+ + G   EA  LF  M +  +  D++T+ TV+ + A   +I + +QVH
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +      F S+  IVNSL+D Y KCG +E A  +F+     D+++  ++I  Y    L +
Sbjct: 290 SWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYK 349

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN--- 438
           EAL L+ EM      P+     S+L ACA+L A + G+ +HV+I K    S T A +   
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-RLKSATNASSLRT 408

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           SL++MYAKCG I+ A + F+ I  + + SW+AMI G A HGR   A  +F +M + G+ P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEP 468

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           + IT V +L AC+ +G++   +H F +M + + I P  EHY CMID+LG +G F+EA E+
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 528

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           ++ M  + +  +W +LL A +I  NVE+G+  A+ L  IEPE    +VLLSNIYA+AG W
Sbjct: 529 INNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRW 588

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
           + VAK+R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL KA
Sbjct: 589 NEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKA 648

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           G+VP     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + 
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 708

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 709 KLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 266/582 (45%), Gaps = 88/582 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK+C   K    G Q+HG V+  G+D D FV  SL+ +Y + G   D+R+         
Sbjct: 140 LLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRD 199

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 LFD IP + VVSWN++ S Y      +EA+  FKEM+ 
Sbjct: 200 VVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK 259

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + IRP+E ++ ++++ACA SG   LGR++H +    G+ S++   N+L+D+Y+K G LE 
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S   PN  T  S L ACA 
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAH 379

Query: 210 MELKELGRQLHCSLIKMEIKSDP---IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           +   ++GR +H  + K  +KS      +   L+DMYAKCG ++ A  +F+ +  K+L +W
Sbjct: 380 LGAIDIGRWIHVYIDK-RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G   +G    A  +F  M + G+  D  T   +L + +    + + + +     +
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHI----FR 494

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           T   + DY +   ++ YG                         MI      GL +EA ++
Sbjct: 495 TM--TQDYKITPKLEHYG------------------------CMIDLLGHSGLFKEAEEM 528

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK--------FGFMSDTFAGN 438
              + + E+ PD  +  SLL AC      E G+    ++IK        +  +S+ +A  
Sbjct: 529 ---INNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATA 585

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM----IGGLAQHGRGKEALQMFGQM--- 491
              N  AK  ++ + D+   ++P    +   ++    I G   H R +E   M  +M   
Sbjct: 586 GRWNEVAKIRALLN-DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644

Query: 492 LED-GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           LE  G +P+      VL            +HH E +   FG+
Sbjct: 645 LEKAGFVPD---TSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 264/596 (44%), Gaps = 78/596 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIP 57
           +L  C + + L L   +H  ++ TG  +  +  + L+ +     +F     +  +F+ I 
Sbjct: 39  LLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQ 95

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E +++ WN++F  +        A+  +  M+  G+ PN ++   ++ +CA S     G++
Sbjct: 96  EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------------ 159
           IHG+ +KLGYD D+F   +L+ +Y + G LEDA  VF    H                  
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215

Query: 160 -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                         D+VSWNA+I+G     +   AL+LF++M  + I P+  T  + + A
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     ELGRQ+H  +      S+  +   L+D+Y+KCG ++ A  +F  +  K++I+W
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL--- 323
           N +I G+       EA  LF  M R G   +  T+ ++L + A   AI + + +H     
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            +K+A  +   +  SLID Y KCG +E A ++F       L +  +MI  +A  G  + A
Sbjct: 396 RLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAA 454

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
             ++  M+   I PD      LL+AC+     + G+ +      F  M+  +     +  
Sbjct: 455 FDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHI------FRTMTQDYKITPKLEH 508

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y                          MI  L   G  KEA +M   M  +   P+ +  
Sbjct: 509 YG------------------------CMIDLLGHSGLFKEAEEMINNMEME---PDGVIW 541

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH-YACMIDILGRAGKFQEAMEL 558
            S+L AC   G V   +   +++ K   I+P     Y  + +I   AG++ E  ++
Sbjct: 542 CSLLKACKIRGNVELGESFAQNLIK---IEPENPGCYVLLSNIYATAGRWNEVAKI 594


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/738 (35%), Positives = 407/738 (55%), Gaps = 32/738 (4%)

Query: 65  NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK 124
           NSL   Y       EA+  +  M++ G+ PN ++   +++ C        G ++HG  +K
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           +G + D+F  N L+  YA+ G+++    VF+ +   ++VSW ++I G    +    A+ L
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F +M  + I P+  T    + ACA +   ++G ++   + ++ +K + ++   LVDMY K
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CG++D A+ +F    ++NL+ +N ++S + + G   EA ++   M ++G   D+ T+ + 
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH---------------- 348
           + + A    +   K  H   ++   E  D I N +ID Y KCG                 
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399

Query: 349 ---------------VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
                          VE A ++F +    + V   +MI+   Q  L E+A++L+ EMQ  
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I  D      + +AC  L A E  K VH +I K G   D     +LV+M+A+CG    A
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSA 519

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            + F+++ +R + +W+A IG +A  G G+ A  +F QML  GV P+ +  V VL AC+H 
Sbjct: 520 MQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHG 579

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           G V +  H F  ME   GI P  EHY CM+D+LGRAG  +EA +L+ +MP + N  VWG+
Sbjct: 580 GQVEQGLHIFSLMEDH-GISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGS 638

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
           LL A R++KNVE+  +AAE +  + P+++  HVLLSNIYASAG W +VA+VR  +++  +
Sbjct: 639 LLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGV 698

Query: 634 KKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEE 693
           +K PG S ++V   ++ FT GD SH     I   L E++   + AG++P +   L DV+E
Sbjct: 699 RKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDE 758

Query: 694 SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
            EKE LL  HSEKLA+AFGLIAT     IRV KNLR+C DCH+  +  S I +REIIVRD
Sbjct: 759 QEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRD 818

Query: 754 VNRFHHFRNGSCSCGGYW 771
            NRFH FR G CSC  YW
Sbjct: 819 NNRFHFFRQGLCSCCDYW 836



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 236/510 (46%), Gaps = 32/510 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  CT       G+QVHG VV  G + D F+ N L+  YA+CG+     ++F+ + ER+
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERN 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL   Y   D  +EAV  F EMV +GIRP+  ++  +I+ACA   D  +G ++  
Sbjct: 197 VVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCA 256

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +LG   +    NALVDMY K G ++ A  +F +    ++V +N +++          
Sbjct: 257 YIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLARE 316

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +  +M      P+  T  SA+ A A +     G+  H  +I+  ++    +G  ++D
Sbjct: 317 ALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIID 376

Query: 241 MYAKCGSMDEARMIFHLM-------------------------------PEKNLIAWNIV 269
           MY KCG  + A  +F LM                               PE+N + WN +
Sbjct: 377 MYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTM 436

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG +Q     +A  LF  M  EG+  D+ T+  +  +     A  + K VH    K   
Sbjct: 437 ISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGI 496

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D  +  +L+D + +CG  + A+++F + +  D+ A T+ I   A  G GE A  L+ +
Sbjct: 497 PCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQ 556

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M  + + PD  +   +L AC++    EQG  +   +   G          +V++  + G 
Sbjct: 557 MLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGL 616

Query: 450 IDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           + +A      +P +   V W +++     H
Sbjct: 617 LREAFDLIKSMPMEPNDVVWGSLLAACRVH 646



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 238/509 (46%), Gaps = 41/509 (8%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED------AVAVFK-DIEHPD-IVSWNA 167
           +++H    K G D    +   LV+  A++ + E       A  +FK D+   D +   N+
Sbjct: 42  KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +I G         A+ L+ +M    + PN +T+   L  C  +     G Q+H S++KM 
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
           ++ D  +   L+  YA+CG MD    +F  M E+N+++W  +I G+ +     EA SLF 
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFF 221

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M   G+     T+  V+ + A  + + + ++V A   +   + +  +VN+L+D Y KCG
Sbjct: 222 EMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCG 281

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            ++ A ++F E    +LV   ++++ YA+ GL  EAL +  EM  +   PD     S ++
Sbjct: 282 AIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAIS 341

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS------------------ 449
           A A L     GK  H ++I+ G       GN +++MY KCG                   
Sbjct: 342 ASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS 401

Query: 450 -------------IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
                        ++ A   F++IP+R  V W+ MI GL Q    ++A+++F +M  +G+
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
             + +T++ +  AC + G    AK     +EK  GI         ++D+  R G  Q AM
Sbjct: 462 KADRVTMMGIASACGYLGAPELAKWVHTYIEKN-GIPCDMRLNTALVDMFARCGDPQSAM 520

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVE 585
           ++ + M  + + S W A +G   +  N E
Sbjct: 521 QVFNKMT-ERDVSAWTAAIGTMAMEGNGE 548



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 223/464 (48%), Gaps = 28/464 (6%)

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           Q+K ++          +L+ C    L +L +QLHC + K  +   P     LV+  A+  
Sbjct: 15  QIKEADPMTKDSCLNESLRCCK--TLNQL-KQLHCQITKNGLDQIPSTLTKLVNAGAEIA 71

Query: 247 S---MDEARMIFHLMPEK-----NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           S   +D AR  F L  E       L   N +I G+   G   EA  L+  M   GV  + 
Sbjct: 72  SPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNH 131

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL       A     QVH   VK   E D +I N LI  Y +CGH++   K+F+ 
Sbjct: 132 YTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEG 191

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S  ++V+ TS+I  YA+    +EA+ L+ EM +  I P S     +++ACA L   + G
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           ++V  +I + G   +    N+LV+MY KCG+ID A R F E  DR +V ++ ++   A+ 
Sbjct: 252 ERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ 311

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV----AEAKHHFESMEKKFGIQP 534
           G  +EAL +  +ML+ G  P+ +T++S + A   A LV     +  H +     + G++ 
Sbjct: 312 GLAREALAILDEMLQQGPRPDRVTMLSAISA--SAQLVDLFYGKVCHGYVI---RNGLEG 366

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
                  +ID+  + GK + A  + D M  +   S W +L   A   +N +V   +A  +
Sbjct: 367 WDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS-WNSL--TAGFIRNGDV--ESAWEV 421

Query: 595 FAIEPEKSST--HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           F   PE+++   + ++S +   + ++++  ++ R M+   +K +
Sbjct: 422 FNQIPERNAVFWNTMISGLVQKS-LFEDAIELFREMQGEGIKAD 464



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 1/166 (0%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VH  +   G   D  +  +LV M+A+CG+   + ++F+ + ER V +W +          
Sbjct: 487 VHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGN 546

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
            E A   F +M++ G++P+      ++ AC+  G    G  I       G    +     
Sbjct: 547 GEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGC 606

Query: 137 LVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWA 181
           +VD+  + G L +A  + K +   P+ V W +++A C +H++ + A
Sbjct: 607 MVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMA 652


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/708 (35%), Positives = 394/708 (55%), Gaps = 66/708 (9%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++F+ N+L+ M+AK G L DA  VF ++   D VSW  ++ G         A+K    M 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG--- 246
           +    P  FT T+ L +CA  +   +GR++H  ++K+ + S   V   +++MY KCG   
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216

Query: 247 ----------------------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
                                        MD A  +F  MP +++++WN +I+G+ QNG 
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276

Query: 279 DMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           D +A  LF  M  E  +  D+ T+++VL + A+   + + KQVHA  ++T    +  + N
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDL--------------------------------- 364
           +LI  Y K G VE+A +I  +S   DL                                 
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           VA T+MI  Y Q G  +EA+ L+  M      P+S+  +++L+ CA+L+  + GKQ+H  
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKE 483
            I+      +   N+++ MYA+ GS   A R F ++  R   ++W++MI  LAQHG+G+E
Sbjct: 457 AIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+ +F +ML  GV P+ IT V VL AC+HAG V E K +++ ++ +  I P   HYACM+
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 576

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+L RAG F EA E +  MP + +A  WG+LL A R++KN E+ + AAE L +I+P  S 
Sbjct: 577 DLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 636

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +  ++N+Y++ G W + A++ +  K+  ++KE G SW  ++ K++ F   D  H +   
Sbjct: 637 AYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDA 696

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           +YA    + + +  AG+VP +++ LHDV++  KE+LL  HSEKLA+AFGLI+TP   T+R
Sbjct: 697 VYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLR 756

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V KNLR+C DCH + + ISK+  REIIVRD  RFHHFR+G CSC  YW
Sbjct: 757 VMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 242/516 (46%), Gaps = 68/516 (13%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F  NSL+ M+AK G   D+R +F  +PER  VSW  +           EA+    +M   
Sbjct: 99  FTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD 158

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G  P +F+L++++++CA +    +GRK+H + +KLG  S +  AN++++MY K G+ E A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETA 218

Query: 151 VAV-------------------------------FKDIEHPDIVSWNAVIAGCVLHEHND 179
             V                               F+ +    IVSWNA+IAG   +  + 
Sbjct: 219 STVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDA 278

Query: 180 WALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            ALKLF +M   S + P+ FT TS L ACA +    +G+Q+H  +++ E+  +  V   L
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338

Query: 239 VDMYAKCGS---------------------------------MDEARMIFHLMPEKNLIA 265
           +  YAK GS                                 M+ AR +F +M  ++++A
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVA 398

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W  +I G+ QNG + EA  LF  M   G   +  TL+ VL   AS   +   KQ+H  ++
Sbjct: 399 WTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAI 458

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEAL 384
           ++  E    + N++I  Y + G    A ++F +     + +  TSMI A AQ G GEEA+
Sbjct: 459 RSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAV 518

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNM 443
            L+ EM    + PD      +L+AC++     +GK+ +  I     ++   +  + +V++
Sbjct: 519 GLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDL 578

Query: 444 YAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            A+ G   +A      +P +   ++W +++     H
Sbjct: 579 LARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 614



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 228/531 (42%), Gaps = 100/531 (18%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C   +   +G +VH  VV  G  S   VANS++ MY KCG+   +  +F+ +P RS
Sbjct: 170 VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRS 229

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-------------------------------- 88
           V SWN++ S   H   ++ A   F+ M                                 
Sbjct: 230 VSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 289

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDS----------------- 129
            S + P+EF+++S+++ACA  G+  +G+++H Y ++  + Y+S                 
Sbjct: 290 ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVE 349

Query: 130 --------------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                         ++ S  AL++ Y K+G++E A  +F  + + D+V+W A+I G   +
Sbjct: 350 NARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQN 409

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             ND A+ LF+ M +    PN +T  + L  CA +   + G+Q+HC  I+  ++    V 
Sbjct: 410 GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVS 469

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             ++ MYA+ GS   AR +F  +   K  I W  +I    Q+G   EA  LF  M R GV
Sbjct: 470 NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV 529

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T   VL + +           HA  V       D I N                 
Sbjct: 530 EPDRITYVGVLSACS-----------HAGFVNEGKRYYDQIKN----------------- 561

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
             +   A ++     M+   A+ GL  EA +    M    + PD+    SLL+AC     
Sbjct: 562 --EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKN 616

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            E  +     ++     +++ A +++ N+Y+ CG   DA R +    ++ +
Sbjct: 617 AELAELAAEKLLSID-PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 49/240 (20%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMS------------------------------ 432
           + LL  C   +    G+ +H   +K G ++                              
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 433 -------DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
                  + F  NSL++M+AK G + DA   F+E+P+R  VSW+ M+ GL + GR  EA+
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAI 149

Query: 486 QMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           +    M  DG  P   TL +VL  CA   AG V    H F     K G+         ++
Sbjct: 150 KTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVV---KLGLGSCVPVANSVL 206

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ-HAAEMLFAIEPEKS 602
           ++ G+ G  + A  + + MP ++  S W A+     +  N  +G+   AE LF   P +S
Sbjct: 207 NMYGKCGDAETASTVFERMPVRS-VSSWNAM-----VSLNTHLGRMDLAESLFESMPGRS 260


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/590 (40%), Positives = 367/590 (62%), Gaps = 1/590 (0%)

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+    + + E+ P    Y S + ACA  +     R +H  L +  +  D  +   L+ M
Sbjct: 45  LRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHM 104

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCG++ +AR +F  MP +++++W  +I+G+ QN    EA  L P M R     +  T 
Sbjct: 105 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 164

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++LK+  +     + +Q+HAL+VK  ++ D Y+ ++L+D Y +C  ++ A+ +F    +
Sbjct: 165 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 224

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            + V+  ++I  +A+   GE  L  + EMQ        F  SS+ +A A + A EQG+ V
Sbjct: 225 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 284

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H H+IK G     F GN+++ MYAK GS+ DA + F  +  R +V+W+ M+  LAQ+G G
Sbjct: 285 HAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLG 344

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KEA+  F ++ + G+  N IT +SVL AC+H GLV E KH+F+ M K + +QP  +HY  
Sbjct: 345 KEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVS 403

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
            +D+LGRAG  +EA+  V  MP +  A+VWGALLGA R++KN ++GQ+AA+ +F ++P+ 
Sbjct: 404 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDD 463

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           +   VLL NIYAS G W++ A+VR+ MK   +KKEP  SW+++++ V+ F   D +H +S
Sbjct: 464 TGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKS 523

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            +IY   +E++  + KAGYVP     L  + E E+E  L +HSEK+A+AF LI  P GA+
Sbjct: 524 GDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGAS 583

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KN+RIC DCH++F+++SK+  REI+VRD NRFHHF  GSCSCG YW
Sbjct: 584 IRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 218/465 (46%), Gaps = 35/465 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   K+L     +H  +  +    D F+ NSL+ MY KCG   D+R +FD +P R 
Sbjct: 66  IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW  L + Y       EA+    +M+ +  RPN F+ +S++ A    G   +G ++H 
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHA 185

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K  +D D++  +AL+DMYA+   ++ A+ VF  +   + VSWNA+IAG       + 
Sbjct: 186 LAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 245

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L  F +M+ +      FTY+S   A A +   E GR +H  LIK   K    VG  ++ 
Sbjct: 246 TLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLG 305

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GSM +AR +F  M +++L+ WN +++   Q G   EA + F  + + G+  +Q T
Sbjct: 306 MYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQIT 365

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +    +   K    +         DY V   ID Y                S
Sbjct: 366 FLSVLTACSHGGLVKEGKHYFDM-------MKDYNVQPEIDHY---------------VS 403

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VDL+          + GL +EAL    +M    + P + V  +LL AC      + G+ 
Sbjct: 404 FVDLL---------GRAGLLKEALIFVFKM---PMEPTAAVWGALLGACRMHKNAKMGQY 451

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              H+ +     DT     L N+YA  G  +DA R    +   G+
Sbjct: 452 AADHVFELD-PDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGV 495



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 189/407 (46%), Gaps = 6/407 (1%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P      S+I ACA   +    R IH +  +     D F  N+L+ MY K G + DA 
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D+VSW  +IAG   +     A+ L   M  +   PN FT+TS LKA     
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
              +G Q+H   +K     D  VG  L+DMYA+C  MD A M+F  +  KN ++WN +I+
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  +          F  M R G G    T S++  + A   A+   + VHA  +K+  + 
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             ++ N+++  Y K G + DA K+F      DLV   +M+TA AQ+GLG+EA+  + E++
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 355

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              I  +     S+L AC++    ++GK     +  +    +     S V++  + G + 
Sbjct: 356 KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLK 415

Query: 452 DADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           +A     ++P     + W A++G    H   K      GQ   D V 
Sbjct: 416 EALIFVFKMPMEPTAAVWGALLGACRMHKNAK-----MGQYAADHVF 457


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/595 (42%), Positives = 365/595 (61%), Gaps = 8/595 (1%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+ QM      PN FT+  ALK+CA + L  LG Q H  + K+    +P V  GL+ 
Sbjct: 33  ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLIS 92

Query: 241 MYAKCGSMDEARMIF--HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           MY K   +D AR +F  +    K  + +N ++SG++ N    EA  LF  M  EGV  + 
Sbjct: 93  MYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNS 152

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL  ++ +  S   + +   +H  ++K  F+SD  +VN  I  Y KCG V  A K+F E
Sbjct: 153 VTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE 212

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                L++  +M++ YAQ GL    L+LY  M    ++PD      +L++CANL A   G
Sbjct: 213 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 272

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            +V   I   GF S+ F  N+L+NMYA+CG++  A   F  +P+R +VSW+A+IGG   H
Sbjct: 273 HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 332

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+ A+Q+F +M+  G+ P+    V VL AC+HAGL  +   +F+ M++ + ++P  EH
Sbjct: 333 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 392

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y+CM+D+LGRAG+ +EA  L+++MP + + +VWGALLGA +I+KNVE+ + A E +  +E
Sbjct: 393 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELE 452

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PE    +VLLSNIY++A     V ++R  MK+ KLKK+PG S++E+K +V+ F VGDR+H
Sbjct: 453 PENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNH 512

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL--LYHHSEKLAVAFGLIAT 716
            +S EIY  L+E+  ++ +    P  E D  + EES K+    +  HSEKLAVAFGL+ T
Sbjct: 513 LQSDEIYRVLEELEAIIMQEFGKP--EKD--NREESNKDGFTRVGVHSEKLAVAFGLLNT 568

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             GA + + KNLRIC DCH  F+ +SKIV R++ VRD  RFHHFRNGSCSC  YW
Sbjct: 569 TTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 220/441 (49%), Gaps = 14/441 (3%)

Query: 62  VSWNS-LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             WN+ L      C FL+ A+  + +M+  G RPN F+    + +CA     +LG + HG
Sbjct: 15  TPWNTQLRELAKRCQFLQ-ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHN 178
              K+G   + F    L+ MY K   +++A  VF++  H     V +NA+++G V +   
Sbjct: 74  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF+QM    +  N  T    + AC      ELG  LHCS +K    SD  V    
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 193

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MY KCGS++ A+ +F  MP K LI+WN ++SG+ QNG       L+  M   GV  D 
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 253

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL  VL S A+  A  V  +V      + F S+ ++ N+LI+ Y +CG++  A  +F  
Sbjct: 254 VTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDG 313

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYE 416
                LV+ T++I  Y   G GE A++L+ EM    I PD  +FVC  +L+AC++    +
Sbjct: 314 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC--VLSACSHAGLTD 371

Query: 417 QGKQVHVHIIKFGFMSDTFAG--NSLVNMYAKCGSIDDADRAFSEIPDR--GIVSWSAMI 472
           QG + +  ++K  +  +      + +V++  + G + +A      +P +  G V W A++
Sbjct: 372 QGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV-WGALL 429

Query: 473 GGLAQHGRGKEALQMFGQMLE 493
           G    H   + A   F +++E
Sbjct: 430 GACKIHKNVELAELAFERVIE 450



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 179/356 (50%), Gaps = 7/356 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAI--PE 58
           LK+C +     LG Q HG +   G   + FV   L+ MY K G+ +D +R++F+      
Sbjct: 56  LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSR 114

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +  V +N+L S YV      EAV  F++M   G+  N  +L  +I AC    +  LG  +
Sbjct: 115 KLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSL 174

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K G+DSD+   N  + MY K G++  A  +F ++    ++SWNA+++G   +   
Sbjct: 175 HCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLA 234

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              L+L++ M  + ++P+  T    L +CA +  + +G ++   +      S+P +   L
Sbjct: 235 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNAL 294

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           ++MYA+CG++ +A+ +F  MPE+ L++W  +I G+  +G    A  LF  M R G+  D 
Sbjct: 295 INMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDG 354

Query: 299 TTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           T    VL   S A     G+ +    +      E      + ++D  G+ G +++A
Sbjct: 355 TAFVCVLSACSHAGLTDQGL-EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEA 409



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 142/262 (54%), Gaps = 1/262 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC S  +L LG  +H   +  GFDSD  V N  + MY KCG+   +++LFD +P + 
Sbjct: 158 LIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKG 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++ S Y         +  ++ M ++G+ P+  +L  ++++CA  G   +G ++  
Sbjct: 218 LISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF 277

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G+ S+ F  NAL++MYA+ GNL  A AVF  +    +VSW A+I G  +H H + 
Sbjct: 278 KIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEI 337

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
           A++LF++M  S I P+   +   L AC+   L + G +    + +  +++  P     +V
Sbjct: 338 AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMV 397

Query: 240 DMYAKCGSMDEARMIFHLMPEK 261
           D+  + G + EA+ +   MP K
Sbjct: 398 DLLGRAGRLKEAQTLIESMPIK 419


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/770 (34%), Positives = 422/770 (54%), Gaps = 19/770 (2%)

Query: 18   HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS---VVSWNSLFSCYVHC 74
            H  +V  G D +  VA +L+ M+A+CG    +R +F+ + + S   +  WN++ + Y H 
Sbjct: 355  HDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 414

Query: 75   DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               +EA+     + L G++PN  +  S + AC+   D   GR +H    + G+D ++  A
Sbjct: 415  GCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQEVSVA 471

Query: 135  NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
            NALV MY K G+L D+  +F ++   D+ SWN+ IA    H  +D  +KL  QM+     
Sbjct: 472  NALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFL 531

Query: 195  PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
                T+ +AL +C      + G  +H  +++   ++D +V   +++MY +CG +D AR I
Sbjct: 532  YEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREI 591

Query: 255  FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA--SFQ 312
            F  +   ++I W  +++ + Q G   +    F  M  EG+     TL  ++  VA    +
Sbjct: 592  FTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLE 651

Query: 313  AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
                   + +L+ ++  ES+  + NSLI+ + +   +  A  IF  +    +   T+M+ 
Sbjct: 652  HFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLA 711

Query: 373  AYAQFGLGEEA-LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            AY +   G+EA L L+  M    + P S    + ++AC  L+     K+VH    + G  
Sbjct: 712  AYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLE 771

Query: 432  SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            S+T   N LV+MY K G +D A   F     R + +W+AM G   Q G  +  L +   M
Sbjct: 772  SETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTM 831

Query: 492  LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
              DG  P+ +T VS+L  C H+GL+ EA+++F +M ++FGI P  +HY+C+ID+L RAG+
Sbjct: 832  QRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGE 891

Query: 552  FQEAMELVDTMPFQANAS--VWGALLGAARIYKNVEVGQHAAEM----LFAIEP----EK 601
             Q+A + +  +   + AS  +W ALLGA R   N       A      +  +EP    + 
Sbjct: 892  LQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDP 951

Query: 602  SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            S+ HV L+NI A++G WD    +R+ M +  L+KEPG S I VK++++ F  GDR H R 
Sbjct: 952  SAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRR 1011

Query: 662  KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            +EIYA+L  +   +   GYV       H+V E++K  LL  HSEKLAVAFG+++TPPG++
Sbjct: 1012 EEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSS 1071

Query: 722  IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +R+ KNLR C DCHT+ + IS I  REI+VRD NRFHHFRNGSCSCG YW
Sbjct: 1072 LRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/639 (28%), Positives = 310/639 (48%), Gaps = 30/639 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF---DSDE----FVANSLVVMYAKCGNFIDSRRLF 53
           +LK C    DL  G ++H  +  +G    D +E    F+ N LV MY KCG   +++R F
Sbjct: 20  LLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           D+I  +++ SW S+   Y H     +A+  F +M+ +G+ P+    + ++  C   GD  
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLA 139

Query: 114 LGRKIHGYSIKLGYDSD-------MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN 166
            G+++H    + G   D        F  N LV MY K G  ++A   F  I H +I SW 
Sbjct: 140 QGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWT 199

Query: 167 AVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +++        +  AL+ F QM  + + P+   + +AL  C  ++  E G  +H  +   
Sbjct: 200 SILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDK 259

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            + SD  +G  LV MY KCG +D A+ +F  +  +N+I+W I++S   +NG   E   L 
Sbjct: 260 PLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLL 319

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDA 342
             M  EG+  D+  L T+L   +S    GV  +     H   V    + +  +  +L+  
Sbjct: 320 RSMAVEGIKPDKVLLLTLLNVCSSR---GVLDEDSWMAHDYIVGGGLDREAVVATALLSM 376

Query: 343 YGKCGHVEDAVKIFKESS--AVDLVAC-TSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           + +CG V+ A +IF++ +  +  ++ C  +MITAYA  G  +EAL L   +Q + + P+ 
Sbjct: 377 FARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNC 436

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               S L AC++L   + G+ +H+ I + GF  +    N+LV MY KCGS+ D+ + FSE
Sbjct: 437 ITFISSLGACSSL---QDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSE 493

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           + ++ + SW++ I   + HGR  E +++  QM  +G L   +T ++ L +C     + + 
Sbjct: 494 MAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDG 553

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA-A 578
               E +  + G +      + +I++ GR G    A E+  T     +  +W  +L    
Sbjct: 554 VLMHEKI-VQCGYEADTVVASAVINMYGRCGGLDRAREIF-TRVKTFDVILWTGMLTVYC 611

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
           ++ +  +V +H   ML         T V L    A +G+
Sbjct: 612 QLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGL 650



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 228/479 (47%), Gaps = 10/479 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+S +D   G  +H ++  +GFD +  VAN+LV MY KCG+ +DS +LF  + E+ +
Sbjct: 443 LGACSSLQD---GRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDL 499

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            SWNS  + + +    +E +    +M   G    + +  + +N+C        G  +H  
Sbjct: 500 ASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEK 559

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            ++ GY++D   A+A+++MY + G L+ A  +F  ++  D++ W  ++            
Sbjct: 560 IVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQV 619

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME--IKSDPIVGVGLV 239
           ++ F+ M    + P   T  + +   A   L+     +  S +  E  ++S+ +V   L+
Sbjct: 620 MEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLI 679

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA-SLFPWMYREGVGFDQ 298
           +M+++  S+ +AR IF   PEK++     +++ +++     EAA +LF  M  EG+    
Sbjct: 680 EMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSS 739

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL T + +          K+VH  + +   ES+  + N L+D YGK G V+ A  IF  
Sbjct: 740 VTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDR 799

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           +   ++    +M  AY Q G+    L L   MQ     PDS    SLL+ C +    E+ 
Sbjct: 800 ALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEA 859

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS---WSAMIG 473
           +   V + + FG        + ++++ A+ G +  A+   + I      S   W A++G
Sbjct: 860 RYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLG 918



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 16/406 (3%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-------IVGVGLVD 240
           +  S ++    +Y   LK C  +     G++LH  + +  +  D         +G  LV 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG  DEA+  F  +  KN+ +W  ++  +   G   +A   F  M + GV  D+  
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDD-------YIVNSLIDAYGKCGHVEDAV 353
            + +LK       +   K++HA   ++    DD       ++ N L+  YGKCG  ++A 
Sbjct: 125 YARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 184

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           + F   +  ++ + TS++ AY   GL  +AL+ + +M    + PD  V  + LN C  L 
Sbjct: 185 RAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILK 244

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
             E G  +H  I      SD   GN+LV+MY KCG +D A   F  +  R ++SW+ ++ 
Sbjct: 245 RLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVS 304

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             A++GR +E   +   M  +G+ P+ + L+++L  C+  G++ E            G+ 
Sbjct: 305 VFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLD 364

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV--WGALLGA 577
                   ++ +  R G+  +A E+ + +   +   +  W A++ A
Sbjct: 365 REAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITA 410


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/585 (41%), Positives = 373/585 (63%), Gaps = 3/585 (0%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           ++ S I  +   Y + LK C   +L   GR +H  +++   + D ++G  L++MYAKCGS
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           ++EAR +F  MP+++ + W  +ISG+ Q+    +A   F  M R G   ++ TLS+V+K+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 308 VASFQAIGVC-KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            A+ +  G C  Q+H   VK  F+S+ ++ ++L+D Y + G ++DA  +F    + + V+
Sbjct: 171 AAA-ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             ++I  +A+    E+AL+L+  M      P  F  +SL  AC++    EQGK VH ++I
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G     FAGN+L++MYAK GSI DA + F  +  R +VSW++++   AQHG GKEA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
            F +M   G+ PN I+ +SVL AC+H+GL+ E  H++E M KK GI P   HY  ++D+L
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLL 408

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG    A+  ++ MP +  A++W ALL A R++KN E+G +AAE +F ++P+    HV
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           +L NIYAS G W++ A+VR+ MK++ +KKEP  SW+E+++ ++ F   D  H + +EI  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           K +EV   + + GYVP     +  V++ E+E  L +HSEK+A+AF L+ TPPG+TI +KK
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           N+R+C DCHT+ +  SK+V REIIVRD NRFHHF++G+CSC  YW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 260/558 (46%), Gaps = 59/558 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK CT  K L  G  VH  ++ + F  D  + N+L+ MYAKCG+  ++R++F+ +P+R 
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W +L S Y   D   +A+ FF +M+  G  PNEF+LSS+I A A       G ++HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G+DS++   +AL+D+Y + G ++DA  VF  +E  + VSWNA+IAG       + 
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ M      P+ F+Y S   AC+     E G+ +H  +IK   K     G  L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+ +AR IF  + ++++++WN +++ + Q+G   EA   F  M R G+  ++ +
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +    +      + L  K     + +   +++D  G+ G +  A++  +E  
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                                             I P + +  +LLNAC      E G  
Sbjct: 426 ----------------------------------IEPTAAIWKALLNACRMHKNTELGAY 451

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGL 475
              H+ +     D      L N+YA  G  +DA R   ++ + G+      SW  +    
Sbjct: 452 AAEHVFELD-PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI---- 506

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLV----SVLCACNHAGLVAEAKH---HFESMEK 528
                 + A+ MF  +  D   P    +      VL      G V +  H   H +  E+
Sbjct: 507 ------ENAIHMF--VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQER 558

Query: 529 KFGIQPMQEHYACMIDIL 546
           +  +Q   E  A    +L
Sbjct: 559 EVNLQYHSEKIALAFALL 576



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 1/380 (0%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           ++++  C      + GR +H + ++  +  D+   N L++MYAK G+LE+A  VF+ +  
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D V+W  +I+G   H+    AL  F QM     +PN FT +S +KA A       G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H   +K    S+  VG  L+D+Y + G MD+A+++F  +  +N ++WN +I+GH +  G 
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            +A  LF  M R+G      + +++  + +S   +   K VHA  +K+  +   +  N+L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y K G + DA KIF   +  D+V+  S++TAYAQ G G+EA+  + EM+   I P+ 
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               S+L AC++    ++G   +  + K G + + +   ++V++  + G ++ A R   E
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423

Query: 460 IPDRGIVS-WSAMIGGLAQH 478
           +P     + W A++     H
Sbjct: 424 MPIEPTAAIWKALLNACRMH 443



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 11/196 (5%)

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +++   I  D    ++LL  C       QG+ VH HI++  F  D   GN+L+NMYAKCG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           S+++A + F ++P R  V+W+ +I G +QH R  +AL  F QML  G  PN  TL SV+ 
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 509 ACNHAGLVAEAK----HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           A       AE +    H       K G        + ++D+  R G   +A  + D +  
Sbjct: 170 AA-----AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224

Query: 565 QANASVWGALL-GAAR 579
           + + S W AL+ G AR
Sbjct: 225 RNDVS-WNALIAGHAR 239


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/769 (33%), Positives = 440/769 (57%), Gaps = 4/769 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C  K+    G +V+ I + +       + N+ + M+ + GN +D+  +F  + ER+
Sbjct: 100 LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERN 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + SWN L   Y    + +EA+C +  M+ + G++P+ ++   ++  C G  D   G+++H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + ++ GY+ D+   NAL+ MY K G+++ A  +F  +   DI+SWNA+I+G   +    
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L+LF  M+   ++P++ T TS + AC  +  + LGR +H  +I      D  V   L 
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY   GS  EA  +F  M  K++++W  +ISG+  N    +A   +  M ++ V  D+ 
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++ VL + A+   +    ++H L++K    S   + N+LI+ Y KC  ++ A+ IF   
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++++ TS+I          EAL ++L      + P++   ++ L ACA + A   GK
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGK 518

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H H+++ G   D F  N+L++MY +CG ++ A   F+    + + SW+ ++ G ++ G
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERG 577

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           +G   +++F +M++  V P+ IT +S+LC C+ + +V +   +F  ME  +G+ P  +HY
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHY 636

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+LGRAG+ QEA + +  MP   + +VWGALL A RI+  +++G+ +A+ +F ++ 
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDK 696

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +    ++LL N+YA  G W  VAKVRR MK+N L  + G SW+EVK KV+ F   D+ H 
Sbjct: 697 KSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHP 756

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           ++KEI   L+   + +++ G   + E+   D  E  ++++   HSE+ A+AFGLI T PG
Sbjct: 757 QTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPG 816

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
             I V KNL +C +CH + +FISK V REI VRD   FHHF++G CSCG
Sbjct: 817 MPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCG 865



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 210/418 (50%), Gaps = 5/418 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS--A 134
           LEEA+     M    +  +E    +++  C        G K+  YSI L   S +     
Sbjct: 75  LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKV--YSIALSSMSSLGVELG 132

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEI 193
           NA + M+ + GNL DA  VF  +   ++ SWN ++ G     + D A+ L+ +M     +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+++T+   L+ C G+     G+++H  +++   + D  V   L+ MY KCG +  AR+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  MP +++I+WN +ISG+ +NG   E   LF  M    V  D  TL++V+ +      
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
             + + +HA  + T F  D  + NSL   Y   G   +A K+F      D+V+ T+MI+ 
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y    L ++A+  Y  M    + PD    +++L+ACA L   + G ++H   IK   +S 
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
               N+L+NMY+KC  ID A   F  IP + ++SW+++I GL  + R  EAL    QM
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 198/406 (48%), Gaps = 13/406 (3%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KL   M+   +  +   + + ++ C     +E G +++   +         +G   + 
Sbjct: 78  AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQT 299
           M+ + G++ +A  +F  M E+NL +WN+++ G+ + G   EA  L+  M +  GV  D  
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL++      +   K+VH   V+  +E D  +VN+LI  Y KCG V+ A  +F   
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+++  +MI+ Y + G+  E L+L+  M+   ++PD    +S+++AC  L     G+
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H ++I  GF  D    NSL  MY   GS  +A++ FS +  + IVSW+ MI G   + 
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG-LVAEAKHHFESMEKKFGIQPMQEH 538
              +A+  +  M +D V P+ IT+ +VL AC   G L    + H      K  I+     
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH------KLAIKARLIS 431

Query: 539 YAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
           Y      +I++  +     +A+++   +P + N   W +++   R+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRL 476


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/769 (33%), Positives = 439/769 (57%), Gaps = 4/769 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C  K+    G +V+ + + +       + N+ + M+ + GN +D+  +F  + ER+
Sbjct: 100 LVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERN 159

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + SWN L   Y    + +EA+C +  M+ + G++P+ ++   ++  C G  D   GR++H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVH 219

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + ++ GY+ D+   NAL+ MY K G+++ A  +F  +   DI+SWNA+I+G   +    
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGH 279

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             LKLF  M+   ++P++ T TS + AC  +  + LGR +H  +I      D  V   L 
Sbjct: 280 EGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY   GS  EA  +F  M  K++++W  +ISG+  N    +A   +  M ++ V  D+ 
Sbjct: 340 QMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEI 399

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++ VL + A+   +    ++H L++K    S   + N+LI+ Y KC  ++ A+ IF   
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++++ TS+I          EAL  + +M+   + P++   ++ L ACA + A   GK
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFFRQMK-MTLQPNAITLTAALAACARIGALMCGK 518

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H H+++ G   D F  N+L++MY +CG ++ A   F+    + + SW+ ++ G ++ G
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERG 577

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           +G   +++F +M++  V P+ IT +S+LC C  + +V +   +F  ME+ +G+ P  +HY
Sbjct: 578 QGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHY 636

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+LGRAG+ QEA + +  MP   + +VWGALL A RI+ N+++G+ +A+ +F ++ 
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDK 696

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
                ++LL N+YA  G W  VAKVRR MK+N L  + G SW+EVK KV+ F   D+ H 
Sbjct: 697 GSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHP 756

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           ++KEI   LD   + +++ G     E+   D  E  ++++   HSE+ A+AFGLI + PG
Sbjct: 757 QTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPG 816

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
             I V KNL +C  CH + +FISK V REI VRD   FHHF++G CSCG
Sbjct: 817 MPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCG 865



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 209/416 (50%), Gaps = 1/416 (0%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           LEEA+     M    +  +E    +++  C        G K++  ++       +   NA
Sbjct: 75  LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNA 134

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINP 195
            + M+ + GNL DA  VF  +   ++ SWN ++ G     + D A+ L+ +M     + P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +++T+   L+ C G+     GR++H  +++   + D  V   L+ MY KCG +  AR++F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MP +++I+WN +ISG+ +NG   E   LF  M    V  D  TL++V+ +        
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + + +HA  + T F  D  + NSL   Y   G   +A K+F      D+V+ T+MI+ Y 
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
              L E+A+  Y  M    + PD    +++L+ACA L   + G ++H   IK   +S   
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
             N+L+NMY+KC  ID A   F  IP + ++SW+++I GL  + R  EAL  F QM
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM 490



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 13/406 (3%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KL   M+   +  +   + + ++ C      E G +++   +         +G   + 
Sbjct: 78  AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLA 137

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQT 299
           M+ + G++ +A  +F  M E+NL +WN+++ G+ + G   EA  L+  M +  GV  D  
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVY 197

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL++      +   ++VH   V+  +E D  +VN+LI  Y KCG V+ A  +F   
Sbjct: 198 TFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+++  +MI+ Y + G+G E LKL+  M+   ++PD    +S+++AC  L     G+
Sbjct: 258 PRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H ++I  GF  D    NSL  MY   GS  +A++ FS +  + IVSW+ MI G   + 
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNF 377

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG-LVAEAKHHFESMEKKFGIQPMQEH 538
             ++A+  +  M +D V P+ IT+ +VL AC   G L    + H      K  I+     
Sbjct: 378 LPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH------KLAIKARLIS 431

Query: 539 YAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
           Y      +I++  +     +A+++   +P + N   W +++   R+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRL 476


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/634 (39%), Positives = 371/634 (58%), Gaps = 2/634 (0%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MY+K+ + E A  V +     ++VSW ++I+G   + H   AL  F +M+   + PN FT
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +  A KA A + L   G+Q+H   +K     D  VG    DMY K    D+AR +F  +P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+NL  WN  IS  + +G   EA   F    R     +  T    L + + +  + +  Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H L +++ F++D  + N LID YGKC  +  +  IF E    + V+  S++ AY Q   
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            E+A  LYL  +   +    F+ SS+L+ACA ++  E G+ +H H +K       F G++
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV--L 497
           LV+MY KCG I+D+++AF E+P++ +V+ +++IGG A  G+   AL +F +M   G    
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           PN++T VS+L AC+ AG V      F+SM   +GI+P  EHY+C++D+LGRAG  + A E
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MP Q   SVWGAL  A R++   ++G  AAE LF ++P+ S  HVLLSN +A+AG 
Sbjct: 421 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 480

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W     VR  +K   +KK  G SWI VK++V+ F   DRSH  +KEI   L ++ + +  
Sbjct: 481 WAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 540

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGY P ++  L+D+EE EK   + HHSEKLA+AFGL++ P    IR+ KNLRIC DCH+ 
Sbjct: 541 AGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSF 600

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+F+S  V REIIVRD NRFH F++G CSC  YW
Sbjct: 601 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 245/509 (48%), Gaps = 26/509 (5%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY+K  +   +R +    P R+VVSW SL S          A+  F EM   G+ PN+F+
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
                 A A     + G++IH  ++K G   D+F   +  DMY K    +DA  +F +I 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             ++ +WNA I+  V       A++ F + +  + +PN  T+ + L AC+      LG Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           LH  +++    +D  V  GL+D Y KC  +  + +IF  M  KN ++W  +++ ++QN  
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
           D +A+ L+    ++ V      +S+VL + A    + + + +HA +VK   E   ++ ++
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D YGKCG +ED+ + F E    +LV   S+I  YA  G  + AL L+ EM  R   P 
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 399 ----SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKC 447
               +FV  SLL+AC+   A E G ++      F  M  T+         + +V+M  + 
Sbjct: 361 PNYMTFV--SLLSACSRAGAVENGMKI------FDSMRSTYGIEPGAEHYSCIVDMLGRA 412

Query: 448 GSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQM--LEDGVLPNHITLV 504
           G ++ A     ++P +  +S W A+      HG+ +  L     +  L+     NH+ L 
Sbjct: 413 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 472

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           +   A   AG  AEA    E + K  GI+
Sbjct: 473 NTFAA---AGRWAEANTVREEL-KGVGIK 497



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 211/471 (44%), Gaps = 46/471 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            KA  S +    G Q+H + V  G   D FV  S   MY K     D+R+LFD IPER++
Sbjct: 65  FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNL 124

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            +WN+  S  V      EA+  F E       PN  +  + +NAC+      LG ++HG 
Sbjct: 125 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 184

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            ++ G+D+D+   N L+D Y K   +  +  +F ++   + VSW +++A  V +  ++ A
Sbjct: 185 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 244

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             L+ + +   +  + F  +S L ACAGM   ELGR +H   +K  ++    VG  LVDM
Sbjct: 245 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 304

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCG ++++   F  MPEKNL+  N +I G+   G    A +LF  M   G G     +
Sbjct: 305 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 364

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---KE 358
           + V                                 SL+ A  + G VE+ +KIF   + 
Sbjct: 365 TFV---------------------------------SLLSACSRAGAVENGMKIFDSMRS 391

Query: 359 SSAVDLVA--CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +  ++  A   + ++    + G+ E A +   +M    I P   V  +L NAC      +
Sbjct: 392 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP---IQPTISVWGALQNACRMHGKPQ 448

Query: 417 QGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
            G     ++ K   +    +GN   L N +A  G   +A+    E+   GI
Sbjct: 449 LGLLAAENLFK---LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 496



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 12/183 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L LG  +H   V    +   FV ++LV MY KCG   DS + FD +PE++
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI--RPNEFSLSSMINACAGSGDSLLGRKI 118
           +V+ NSL   Y H   ++ A+  F+EM   G    PN  +  S+++AC+ +G    G KI
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385

Query: 119 -----HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
                  Y I+ G +      + +VDM  + G +E A    K +   P I  W A+   C
Sbjct: 386 FDSMRSTYGIEPGAE----HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 441

Query: 173 VLH 175
            +H
Sbjct: 442 RMH 444


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/808 (34%), Positives = 445/808 (55%), Gaps = 39/808 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+  T   D  L   VH    F   + D F+ N+L+  Y K G   D+ ++F  +   +
Sbjct: 103 LLRLSTRYGDPDLARAVHA--QFLKLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPN 160

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVS+ +L S +   D+ +EAV  F  M+ SGI PNE++  +++ AC  + D  LG ++HG
Sbjct: 161 VVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHG 220

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +KLG  S +F  NAL+ +Y K G L+  + +F+++   DI SWN VI+  V     D 
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A   F+ M+  + +  + F+ ++ L ACAG      G+QLH   +K+ ++S   V   L+
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340

Query: 240 DMYAKCGS-------------------------------MDEARMIFHLMPEKNLIAWNI 268
             Y KCGS                               +D A  +F+ MP++N I++N 
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           V++G  +N     A  LF  M  EGV     TL++++ +    ++  V +Q+    +K  
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD--LVACTSMITAYAQFGLGEEALKL 386
             S+  I  +L+D Y +CG +EDA KIF + S  +      TSMI  YA+ G   EA+ L
Sbjct: 461 ILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISL 520

Query: 387 YLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   Q    I  D  + +S+L+ C ++  +E G Q+H H +K G +++T  GN+ V+MY+
Sbjct: 521 FHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYS 580

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KC ++DDA R F+ +  + IVSW+ ++ G   H +G +AL ++ +M + G+ P+ IT   
Sbjct: 581 KCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFAL 640

Query: 506 VLCACNHA--GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           ++ A  H    LV   +  F SME +  I+P  EHYA  I +LGR G  +EA + +  MP
Sbjct: 641 IISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMP 700

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            + +  VW ALL + RI KN  + + AA  + A+EP+   +++L SN+Y+++G W    K
Sbjct: 701 LEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEK 760

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           VR  M++   +K P  SWI  ++K+++F   DRSH + K+IY+ L+ +     K GYVP 
Sbjct: 761 VREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPD 820

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
               L +VEE +K++ L++HS KLA  FG++ T PG  I++ KN+R+C DCH   +++S 
Sbjct: 821 TSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSI 880

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  R+I++RD + FH F +G CSC  YW
Sbjct: 881 VTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 17/294 (5%)

Query: 296 FDQTTLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F   +L+T L ++AS          +    + + VHA  +K   E D ++ N+LI AY K
Sbjct: 85  FASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLK 142

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
            G V DA K+F   S  ++V+ T++I+ +++    +EA++L+  M D  I P+ +   ++
Sbjct: 143 LGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAI 202

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L AC     Y+ G QVH  ++K G +S  F  N+L+ +Y KCG +D   R F E+P+R I
Sbjct: 203 LTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDI 262

Query: 466 VSWSAMIGGLAQHGRGKEALQMF-GQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHF 523
            SW+ +I  L +  +  EA   F G  L  G+  +H +L ++L AC  AG V   K    
Sbjct: 263 TSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTAC--AGSVKPMKGQQL 320

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            ++  K G++      + +I    + G   +  +L +TMP + +   W  ++ +
Sbjct: 321 HALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIR-DVITWTGMITS 373


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/706 (36%), Positives = 397/706 (56%), Gaps = 66/706 (9%)

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           FS N ++  +AK GNL+ A  VF +I  PD VSW  +I G         A+  F +M SS
Sbjct: 80  FSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSS 139

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG----- 246
            I+P  FT+T+ L +CA  +  ++G+++H  ++K+       V   L++MYAKCG     
Sbjct: 140 GISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMA 199

Query: 247 --------------------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
                                       D A  +F  M + ++++WN +I+G+   G D+
Sbjct: 200 KVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDI 259

Query: 281 EAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT------------ 327
            A   F +M +   +  D+ TL +VL + A+ +++ + KQ+HA  V+             
Sbjct: 260 RALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNAL 319

Query: 328 --------AFESDDYIV-------------NSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                   A E    IV              SL+D Y K G ++ A  IF      D+VA
Sbjct: 320 ISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVA 379

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T+MI  YAQ GL  +AL L+  M      P+++  +++L+  ++L++ + GKQ+H   I
Sbjct: 380 WTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAI 439

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEAL 485
           +   +S    GN+L+ MY++ GSI DA + F+ I   R  ++W++MI  LAQHG G EA+
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           ++F +ML   + P+HIT V VL AC H GLV + K +F  M+    I+P   HYACMID+
Sbjct: 500 ELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDL 559

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGRAG  +EA   +  MP + +   WG+LL + R++K V++ + AAE L  I+P  S  +
Sbjct: 560 LGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAY 619

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           + L+N  ++ G W++ AKVR+ MKD  +KKE G SW+++K+KV+ F V D  H +   IY
Sbjct: 620 LALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
             + ++   + K G++P   + LHD+E+  KEQ+L HHSEKLA+AF LI TP   T+R+ 
Sbjct: 680 CMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIM 739

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KNLR+C DCH++  +IS +V REIIVRD  RFHHF++GSCSC  YW
Sbjct: 740 KNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 166/552 (30%), Positives = 272/552 (49%), Gaps = 88/552 (15%)

Query: 11  LFLGLQVHGIVVFTGFDSD------------EFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +FL   +  + V TG  SD             F  N+++  +AK GN   +RR+FD IP+
Sbjct: 48  VFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQ 107

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              VSW ++   Y H    + AV  F  MV SGI P +F+ ++++ +CA +    +G+K+
Sbjct: 108 PDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKV 167

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGN------------LED----------------- 149
           H + +KLG    +  AN+L++MYAK G+            L+D                 
Sbjct: 168 HSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQF 227

Query: 150 --AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKA 206
             A+A+F  +  PDIVSWN++I G     ++  AL+ F  M KSS + P+ FT  S L A
Sbjct: 228 DLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSA 287

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS------------------- 247
           CA  E  +LG+Q+H  +++ ++     VG  L+ MYAK G+                   
Sbjct: 288 CANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVI 347

Query: 248 --------------MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
                         +D AR IF  +  ++++AW  +I G+ QNG   +A  LF  M REG
Sbjct: 348 AFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREG 407

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              +  TL+ VL  ++S  ++   KQ+HA++++    S   + N+LI  Y + G ++DA 
Sbjct: 408 PKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDAR 467

Query: 354 KIFKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           KIF    S  D +  TSMI + AQ GLG EA++L+ +M    + PD      +L+AC ++
Sbjct: 468 KIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV 527

Query: 413 SAYEQGKQV-----HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIV 466
              EQGK       +VH I+    S  +A   ++++  + G +++A      +P +  +V
Sbjct: 528 GLVEQGKSYFNLMKNVHNIE--PTSSHYA--CMIDLLGRAGLLEEAYNFIRNMPIEPDVV 583

Query: 467 SWSAMIGGLAQH 478
           +W +++     H
Sbjct: 584 AWGSLLSSCRVH 595



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 253/618 (40%), Gaps = 131/618 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI------DSRR--- 51
           VL +C + + L +G +VH  VV  G      VANSL+ MYAKCG+ +      D  R   
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 LFD + +  +VSWNS+ + Y H  +   A+  F  M+ 
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA------ 142
            S ++P++F+L S+++ACA      LG++IH + ++   D      NAL+ MYA      
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVE 330

Query: 143 ---------------------------KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                                      K+G+++ A A+F  ++H D+V+W A+I G   +
Sbjct: 331 VAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN 390

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                AL LF+ M      PN +T  + L   + +   + G+QLH   I++E  S   VG
Sbjct: 391 GLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVG 450

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             L+ MY++ GS+ +AR IF H+   ++ + W  +I    Q+G   EA  LF  M R  +
Sbjct: 451 NALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINL 510

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL +         C  V                          G VE    
Sbjct: 511 KPDHITYVGVLSA---------CTHV--------------------------GLVEQGKS 535

Query: 355 IFKESSAVDLVACTS-----MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            F     V  +  TS     MI    + GL EEA   Y  +++  I PD     SLL++C
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEA---YNFIRNMPIEPDVVAWGSLLSSC 592

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI---- 465
             +  Y    +V    +     +++ A  +L N  + CG  +DA +    + D+ +    
Sbjct: 593 -RVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQ 651

Query: 466 -VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA----CNHAGLVAEAK 520
             SW  +          K  + +FG  +ED + P    +  ++          G + +  
Sbjct: 652 GFSWVQI----------KNKVHIFG--VEDALHPQRDAIYCMISKIWKEIKKMGFIPDTN 699

Query: 521 HHFESMEKKFGIQPMQEH 538
                +E++   Q ++ H
Sbjct: 700 SVLHDLEQEVKEQILRHH 717



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 171/393 (43%), Gaps = 103/393 (26%)

Query: 215 LGRQLHCSLIKMEIKSDPIVGV----GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
           +GR +H  +IK  ++    +GV     L+++Y K GS  +A  +F  MP K   +WN ++
Sbjct: 30  IGRCIHARIIKHGLR---YLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTIL 86

Query: 271 SGHLQNGGDMEAASLF---------PW----------------------MYREGVGFDQT 299
           S H + G    A  +F          W                      M   G+   Q 
Sbjct: 87  SAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQF 146

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG------------ 347
           T + VL S A+ QA+ V K+VH+  VK        + NSL++ Y KCG            
Sbjct: 147 TFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRM 206

Query: 348 -------------------HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY- 387
                                + A+ +F + +  D+V+  S+IT Y   G    AL+ + 
Sbjct: 207 RLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFS 266

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             ++   + PD F   S+L+ACAN  + + GKQ+H HI++         GN+L++MYAK 
Sbjct: 267 FMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKS 326

Query: 448 GSIDDADR-------------AFSEIPD--------------------RGIVSWSAMIGG 474
           G+++ A R             AF+ + D                    R +V+W+AMI G
Sbjct: 327 GAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVG 386

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
            AQ+G   +AL +F  M+ +G  PN+ TL +VL
Sbjct: 387 YAQNGLISDALVLFRLMIREGPKPNNYTLAAVL 419



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 6/147 (4%)

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           +  TF+ N++++ +AK G++D A R F EIP    VSW+ MI G    G  K A+  F +
Sbjct: 76  LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR 135

Query: 491 MLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
           M+  G+ P   T  +VL  CA   A  V +  H F     + G+ P+      ++++  +
Sbjct: 136 MVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN---SLLNMYAK 192

Query: 549 AGKFQEAMELVDTMPFQANASVWGALL 575
            G    A  + D M  + + S W  ++
Sbjct: 193 CGDSVMAKVVFDRMRLK-DTSTWNTMI 218



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 8/144 (5%)

Query: 396 NPDSF--VCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDD 452
           NP S    C  LL +         G+ +H  IIK G      F  N+L+N+Y K GS  D
Sbjct: 7   NPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSD 66

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A R F E+P +   SW+ ++   A+ G    A ++F ++ +    P+ ++  +++   NH
Sbjct: 67  AHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQ----PDSVSWTTMIVGYNH 122

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQ 536
            GL   A H F  M    GI P Q
Sbjct: 123 LGLFKSAVHAFLRMVSS-GISPTQ 145


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/630 (39%), Positives = 371/630 (58%), Gaps = 3/630 (0%)

Query: 145 GNLEDAVAVFKDIEHP--DIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYT 201
            +L  A+ +F+   HP     S+N +I   +   H + AL LF +M   + ++P+  T  
Sbjct: 116 AHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVA 175

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           + +K+C+ M    +GR +     K     D  V   L+ MYA CG +  A ++FH +  K
Sbjct: 176 NTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVK 235

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
            +IAWN +I+G+++NG   E   +F  M      FD+ TL +V  +        + + + 
Sbjct: 236 GVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIA 295

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
             + +        +  +L+D Y KCG ++ A ++F    + D+VA ++MI+ Y Q     
Sbjct: 296 EYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCR 355

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EAL ++ EMQ  E+NP+     S+L+ACA L A E GK VH +I +         G +LV
Sbjct: 356 EALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALV 415

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           + YAKCG I DA +AF  +P R   +W+A+I G+A +GR +EAL++F  MLE  + P  +
Sbjct: 416 DFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDV 475

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T + VL AC+H  LV E + HF SM + +GI P  EHY CM+D+LGRAG   EA + +  
Sbjct: 476 TFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRN 535

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP + NA VW ALL A  ++KNVE+G+ A + +  ++P  S  ++LLSN YAS G W N 
Sbjct: 536 MPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNA 595

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV 681
           A VR+ MK+  ++K PG S IE++  ++ F   D  H +  EIY K+ E+ + +   GY+
Sbjct: 596 AMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYI 655

Query: 682 PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           P       DV+E EK+  + HHSEKLA+AFGL+ + PGATIR+ KNLR+C+DCH++ + I
Sbjct: 656 PNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLI 715

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           SK+ +REIIVRD NRFHHF++G CSC  YW
Sbjct: 716 SKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 219/467 (46%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +K+C+   DL +G  V       GF  D+FV NSL+ MYA CG+ + +  LF  +  + 
Sbjct: 177 TVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKG 236

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V++WN++ + YV     +E V  FK M+      +E +L S+  AC   GD+ LG+ I  
Sbjct: 237 VIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAE 296

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y+ + G       A ALVDMYAK G L+ A  +F  +   D+V+W+A+I+G    +    
Sbjct: 297 YAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCRE 356

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F +M+ +E+NPN  T  S L ACA +   E G+ +H  + + ++    I+G  LVD
Sbjct: 357 ALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVD 416

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCG + +A   F  MP +N   W  +I G   NG   EA  LF  M    +     T
Sbjct: 417 FYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVT 476

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
                        IGV   + A S     E       S+   YG C  +E          
Sbjct: 477 F------------IGV---LLACSHGCLVEEGRRHFTSMTQDYGICPRIEH--------- 512

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                 C  M+    + GL +EA   Y  +++  I P++ V  +LL+AC      E G++
Sbjct: 513 ----YGC--MVDLLGRAGLIDEA---YQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEE 563

Query: 421 VHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
               I+    +    +GN ++  N YA  G   +A     E+ ++G+
Sbjct: 564 ALKQIVP---LDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGV 607



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 219/438 (50%), Gaps = 10/438 (2%)

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLG 115
           P RS  S+N L   ++     E+A+  F EM+  + + P++ ++++ + +C+   D  +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R +  Y+ K G+  D F  N+L+ MYA  G++  A  +F  ++   +++WNA+IAG V  
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYV-- 248

Query: 176 EHNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           ++ DW   +++F+ M       +  T  S   AC  +    LG+ +     +  +     
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   LVDMYAKCG +D+AR +F  M  ++++AW+ +ISG+ Q+    EA ++F  M    
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  +  T+ +VL + A   A+   K VH+   +        +  +L+D Y KCG ++DAV
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F+     +    T++I   A  G   EAL+L+  M +  I P       +L AC++  
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488

Query: 414 AYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAM 471
             E+G++    + + +G          +V++  + G ID+A +    +P +   V W A+
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548

Query: 472 IGGLAQHGR---GKEALQ 486
           +     H     G+EAL+
Sbjct: 549 LSACTVHKNVEIGEEALK 566


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/686 (38%), Positives = 402/686 (58%), Gaps = 1/686 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ACT   +L   LQ+HG VV  GF  D +V  SL+  YAK G   ++R +FD +  ++
Sbjct: 160 VVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKT 219

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ + Y      E ++  F +M    + P+ + +SS+++AC+       G++IHG
Sbjct: 220 TVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHG 279

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G+D D+   N ++D Y K   ++    +F  +   D+VSW  +IAGC+ +  +  
Sbjct: 280 YVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGD 339

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF +M      P+ F  TS L +C  ++  + GRQ+H   IK+ I +D  V  GL+D
Sbjct: 340 AMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLID 399

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKC S+  AR +F L+   N++++N +I G+ +    +EA  LF  M          T
Sbjct: 400 MYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLT 459

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L   +S   + +  Q+H L +K     D +  ++LID Y KC  V DA  +F+E  
Sbjct: 460 FVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIY 519

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V   +M + Y+Q    EE+LKLY ++Q   + P+ F  ++++ A +N+++   G+Q
Sbjct: 520 DRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQ 579

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H  +IK G   D F  NSLV+MYAKCGSI+++ +AFS    R I  W++MI   AQHG 
Sbjct: 580 FHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGD 639

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             +AL++F +M+ +GV PN++T V +L AC+HAGL+    HHFESM  KFGI+P  +HYA
Sbjct: 640 AAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMS-KFGIEPGIDHYA 698

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+ +LGRAGK  EA E V  MP +  A VW +LL A R+  +VE+G +AAEM  + +P 
Sbjct: 699 CMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPA 758

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S +++LLSNI+AS GMW +V  VR  M  +++ KEPG SWIEV ++V+ F   D +H  
Sbjct: 759 DSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRD 818

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVET 686
           S  I   LD +   +   GYVP   T
Sbjct: 819 STLISLVLDNLILQIKGFGYVPNAAT 844



 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 314/566 (55%), Gaps = 8/566 (1%)

Query: 16  QVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           ++H  +V  GF   D F+ N+L+  Y+K     D+++LFD +P R++V+W+S+ S Y   
Sbjct: 72  KIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQH 131

Query: 75  DFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            +  EA+  F   + S   +PNE+ L+S++ AC   G+     ++HG+ +K G+  D++ 
Sbjct: 132 GYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYV 191

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             +L+D YAK G +++A  +F  ++    V+W A+IAG      ++ +LKLF QM+  ++
Sbjct: 192 GTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDV 251

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+ +  +S L AC+ +E  E G+Q+H  +++     D  V  G++D Y KC  +   R 
Sbjct: 252 YPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRK 311

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F+ + +K++++W  +I+G +QN    +A  LF  M R+G   D    ++VL S  S QA
Sbjct: 312 LFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQA 371

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   +QVHA ++K   ++DD++ N LID Y KC  + +A K+F   +A+++V+  +MI  
Sbjct: 372 LQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEG 431

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y++     EAL L+ EM+     P      SLL   ++L   E   Q+H  IIKFG   D
Sbjct: 432 YSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLD 491

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +FAG++L+++Y+KC  + DA   F EI DR IV W+AM  G +Q    +E+L+++  +  
Sbjct: 492 SFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQM 551

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQEHYACMIDILGRAGK 551
             + PN  T  +V+ A ++   +A  +H   F +   K G+         ++D+  + G 
Sbjct: 552 SRLKPNEFTFAAVIAAASN---IASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGS 608

Query: 552 FQEAMELVDTMPFQANASVWGALLGA 577
            +E+ +   +   Q + + W +++  
Sbjct: 609 IEESHKAFSSTN-QRDIACWNSMIST 633



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 9/167 (5%)

Query: 419 KQVHVHIIKFGF-MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           K++H HI+  GF   D F  N+L++ Y+K     DA + F  +P R +V+WS+M+    Q
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 478 HGRGKEALQMFGQMLED-GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           HG   EAL +F + +      PN   L SV+ AC   G +++A         K G   +Q
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQAL-QLHGFVVKGGF--VQ 187

Query: 537 EHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARI 580
           + Y    +ID   + G   EA  + D +  +   + W A++ G A++
Sbjct: 188 DVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVT-WTAIIAGYAKL 233


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/658 (41%), Positives = 381/658 (57%), Gaps = 5/658 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH   ++     D FSA+ +V   A    G+L  A  VF  I +P   + N++I G  
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                  A+  +Q M    ++P+ FT+ S  K+C    L E G+QLHC   K+   SD  
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG--VLCE-GKQLHCHSTKLGFASDAY 173

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   L++MY+ CG +  AR +F  M  K++++W  +I  + Q     EA  LF  M    
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  ++ TL  VL + A  + +   KQVH    +T       + ++L+D Y KCG    A 
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR 293

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +F +    +L     MI  + +    EEAL L+ EMQ   +  D    +SLL AC +L 
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG 353

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A E GK +HV+I K     D   G +LV+MYAKCGSI+ A R F E+P++ +++W+A+I 
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           GLA  G+G +AL++F +M    V P+ IT V VL AC+HAGLV E   +F SM  K+GIQ
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQ 473

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY CM+D+LGRAG+  EA +L+  MP   +  V   LL A RI+ N+ V + AA+ 
Sbjct: 474 PSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQ 533

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  ++P+   T+VLLSNIY+S   W+   K+R  M +  +KK PG S IEV   V+ F  
Sbjct: 534 LIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVK 593

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD SH +S EIY  LD++   L  AGYVP     L D++E EKE  L  HSEKLA+AFGL
Sbjct: 594 GDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGL 653

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++T PG  IRV KNLR+C DCH++ +FIS++ +REIIVRD NRFHHF  GSCSC  +W
Sbjct: 654 LSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 261/522 (50%), Gaps = 42/522 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPER 59
           L+ CT+   L    Q+H  ++ T    D F A+ +V   A    G+   +R +F+ IP  
Sbjct: 47  LEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNP 103

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +  + NS+   Y + +   +A+ F++ M+L G+ P+ F+  S+  +C   G    G+++H
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLH 160

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            +S KLG+ SD +  N L++MY+  G L  A  VF  + +  +VSW  +I      +   
Sbjct: 161 CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPH 220

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+KLF++M+ + + PN  T  + L ACA     E  +Q+H  + +  I    ++   L+
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALM 280

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KCG    AR +F+ MPEKNL  WNI+I+GH+++    EA SLF  M   GV  D+ 
Sbjct: 281 DVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKV 340

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++++L +     A+ + K +H    K   E D  +  +L+D Y KCG +E A+++F+E 
Sbjct: 341 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 400

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D++  T++I   A  G G +AL+L+ EMQ  E+ PD+     +L AC++     +G 
Sbjct: 401 PEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG- 459

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
                I  F         NS+ N Y    SI+                +  M+  L + G
Sbjct: 460 -----IAYF---------NSMPNKYGIQPSIEH---------------YGCMVDMLGRAG 490

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACN-HAGLVAEAK 520
           R  EA  +   M    + P++  LV +L AC  H  LV   +
Sbjct: 491 RIAEAEDLIQNM---PMAPDYFVLVGLLSACRIHGNLVVAER 529



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 140/260 (53%), Gaps = 1/260 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC   +DL    QVH  +  TG      + ++L+ +Y KCG +  +R LF+ +PE++
Sbjct: 244 VLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKN 303

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN + + +V     EEA+  F EM LSG++ ++ +++S++ AC   G   LG+ +H 
Sbjct: 304 LFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHV 363

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  K   + D+    ALVDMYAK G++E A+ VF+++   D+++W A+I G  +      
Sbjct: 364 YIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLK 423

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LV 239
           AL+LF +M+ SE+ P+  T+   L AC+   L   G     S+         I   G +V
Sbjct: 424 ALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMV 483

Query: 240 DMYAKCGSMDEARMIFHLMP 259
           DM  + G + EA  +   MP
Sbjct: 484 DMLGRAGRIAEAEDLIQNMP 503


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/595 (41%), Positives = 365/595 (61%), Gaps = 8/595 (1%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+ QM      PN FT+  ALK+CA + L  LG Q H  + K+    +P V  GL+ 
Sbjct: 24  ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLIS 83

Query: 241 MYAKCGSMDEARMIF--HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           MY K   +D AR +F  +    K  + +N ++SG++ N    +A  LF  M  EGV  + 
Sbjct: 84  MYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNS 143

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL  ++ +  S   + +   +H  ++K  F+SD  +VN  I  Y KCG V  A K+F E
Sbjct: 144 VTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE 203

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                L++  +M++ YAQ GL    L+LY  M    ++PD      +L++CANL A   G
Sbjct: 204 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 263

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            +V   +   GF S+ F  N+L+NMYA+CG++  A   F  +P+R +VSW+A+IGG   H
Sbjct: 264 HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 323

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+ A+Q+F +M+  G+ P+    V VL AC+HAGL  +   +F+ M++ + ++P  EH
Sbjct: 324 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 383

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y+CM+D+LGRAG+ +EA  L+++MP + + +VWGALLGA +I+KNVE+ + A E +  +E
Sbjct: 384 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELE 443

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PE    +VLLSNIY++A     V ++R  MK+ KLKK+PG S++E+K +V+ F VGDR+H
Sbjct: 444 PENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNH 503

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL--LYHHSEKLAVAFGLIAT 716
            +S EIY  L+E+  ++ +    P  E D  + EES K+    +  HSEKLAVAFGL+ T
Sbjct: 504 LQSDEIYRVLEELEAIIMQEFGKP--EKD--NREESNKDGFTRVGVHSEKLAVAFGLLNT 559

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             GA + + KNLRIC DCH  F+ +SKIV R++ VRD  RFHHFRNGSCSC  YW
Sbjct: 560 TTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 220/441 (49%), Gaps = 14/441 (3%)

Query: 62  VSWNS-LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             WN+ L      C FL+ A+  + +M+  G RPN F+    + +CA     +LG + HG
Sbjct: 6   TPWNTQLRELAKRCQFLQ-ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHN 178
              K+G   + F    L+ MY K   +++A  VF++  H     V +NA+++G V +   
Sbjct: 65  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF+QM    +  N  T    + AC      ELG  LHCS +K    SD  V    
Sbjct: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 184

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + MY KCGS++ A+ +F  MP K LI+WN ++SG+ QNG       L+  M   GV  D 
Sbjct: 185 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 244

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL  VL S A+  A  V  +V      + F S+ ++ N+LI+ Y +CG++  A  +F  
Sbjct: 245 VTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDG 304

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYE 416
                LV+ T++I  Y   G GE A++L+ EM    I PD  +FVC  +L+AC++    +
Sbjct: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC--VLSACSHAGLTD 362

Query: 417 QGKQVHVHIIKFGFMSDTFAG--NSLVNMYAKCGSIDDADRAFSEIPDR--GIVSWSAMI 472
           QG + +  ++K  +  +      + +V++  + G + +A      +P +  G V W A++
Sbjct: 363 QGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV-WGALL 420

Query: 473 GGLAQHGRGKEALQMFGQMLE 493
           G    H   + A   F +++E
Sbjct: 421 GACKIHKNVELAELAFERVIE 441



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 179/356 (50%), Gaps = 7/356 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAI--PE 58
           LK+C +     LG Q HG +   G   + FV   L+ MY K G+ +D +R++F+      
Sbjct: 47  LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSR 105

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +  V +N+L S YV      +AV  F++M   G+  N  +L  +I AC    +  LG  +
Sbjct: 106 KLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSL 165

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K G+DSD+   N  + MY K G++  A  +F ++    ++SWNA+++G   +   
Sbjct: 166 HCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLA 225

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              L+L++ M  + ++P+  T    L +CA +  + +G ++   +      S+P +   L
Sbjct: 226 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNAL 285

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           ++MYA+CG++ +A+ +F  MPE+ L++W  +I G+  +G    A  LF  M R G+  D 
Sbjct: 286 INMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDG 345

Query: 299 TTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           T    VL   S A     G+ +    +      E      + ++D  G+ G +++A
Sbjct: 346 TAFVCVLSACSHAGLTDQGL-EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEA 400



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 142/262 (54%), Gaps = 1/262 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC S  +L LG  +H   +  GFDSD  V N  + MY KCG+   +++LFD +P + 
Sbjct: 149 LIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKG 208

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++ S Y         +  ++ M ++G+ P+  +L  ++++CA  G   +G ++  
Sbjct: 209 LISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF 268

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G+ S+ F  NAL++MYA+ GNL  A AVF  +    +VSW A+I G  +H H + 
Sbjct: 269 KMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEI 328

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
           A++LF++M  S I P+   +   L AC+   L + G +    + +  +++  P     +V
Sbjct: 329 AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMV 388

Query: 240 DMYAKCGSMDEARMIFHLMPEK 261
           D+  + G + EA+ +   MP K
Sbjct: 389 DLLGRAGRLKEAQTLIESMPIK 410


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/714 (36%), Positives = 422/714 (59%), Gaps = 25/714 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C+  +D  LG+Q+HG+VV  G D+D   A++L+ MYAK   F++S R+F  IPE++
Sbjct: 144 ILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++ +  V  + L  A+ FFKEM       ++   +S++ +CA   +  LG ++H 
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + +D     A +DMYAK  N++DA  +F   E+ +  S+NA+I G    EH   
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFK 323

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF ++ SS +  +  + +   +ACA ++    G Q++   IK  +  D  V    +D
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAID 383

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++ EA  +F  M  ++ ++WN +I+ H QNG   E   LF  M R  +  D+ T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI---FK 357
             +VLK+     ++G   ++H+  VK+   S+  +  SLID Y KCG +E+A KI   F 
Sbjct: 444 FGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 502

Query: 358 ESSAVD-----------------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + + V                   V+  S+I+ Y      E+A  L+  M +  I PD F
Sbjct: 503 QRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 562

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +++L+ CANL++   GKQ+H  +IK    SD +  ++LV+MY+KCG + D+   F + 
Sbjct: 563 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKS 622

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R  V+W+AMI G A HG+G+EA+Q+F +M+ + + PNH+T +S+L AC H GL+ +  
Sbjct: 623 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 682

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            +F  M++ +G+ P   HY+ M+DILG++GK + A+EL+  MPF+A+  +W  LLG   I
Sbjct: 683 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 742

Query: 581 YK-NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           ++ NVEV + A   L  ++P+ SS + LLSN+YA AGMW+ V+ +RR M+  KLKKEPG 
Sbjct: 743 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 802

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV-SDL--LNKAGYVPMVETDLHD 690
           SW+E+KD+++ F VGD++H R +EIY +L  + S++   + + +VP VE +  D
Sbjct: 803 SWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVPGVEVEEED 856



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 183/623 (29%), Positives = 314/623 (50%), Gaps = 56/623 (8%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C  +  L LG Q H  ++ +GF    FV N L+ +Y    +F+ +  +FD +P R VVSW
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 65  NSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPNEFSLSSM------------ 102
           N + + Y   + + +A  FF  M          +LSG   N  +L S+            
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 103 ---------INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
                    +  C+   D+ LG +IHG  +++G D+D+ +A+AL+DMYAK     +++ V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F+ I   + VSW+A+IAGCV +     ALK F++M+      +   Y S L++CA +   
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            LG QLH   +K +  +D IV    +DMYAKC +M +A+++F      N  ++N +I+G+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGY 315

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            Q     +A  LF  +   G+GFD+ +LS V ++ A  + +    Q++ L++K++   D 
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+ ID YGKC  + +A ++F E    D V+  ++I A+ Q G G E L L++ M   
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I PD F   S+L AC    +   G ++H  I+K G  S++  G SL++MY+KCG I++A
Sbjct: 436 RIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494

Query: 454 DRAFSEIPDRG--------------------IVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           ++  S    R                      VSW+++I G     + ++A  +F +M+E
Sbjct: 495 EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            G+ P+  T  +VL  C +       K  H + ++K+  +Q      + ++D+  + G  
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYISSTLVDMYSKCGDL 612

Query: 553 QEAMELVDTMPFQANASVWGALL 575
            ++  L+     + +   W A++
Sbjct: 613 HDS-RLMFEKSLRRDFVTWNAMI 634


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/682 (37%), Positives = 394/682 (57%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ACT  K + LG QVHGI V    D++ +V  +L+ +YAK G   ++  +F A+P R+
Sbjct: 126 VLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRT 185

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WN++ + Y        A+  F  M + G+RP+ F L+S ++AC+  G    GR+IHG
Sbjct: 186 PVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHG 245

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y+ +   ++D    N L+D+Y K   L  A  +F  +E+ ++VSW  +I+G + +  N  
Sbjct: 246 YAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAE 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ +F  M  +   P+ F  TS L +C  +     GRQ+H  +IK ++++D  V   L+D
Sbjct: 306 AITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALID 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKC  + EAR +F  + E + I++N +I G+ +N    EA ++F  M    +     T
Sbjct: 366 MYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLT 425

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L   +S  AI + KQ+H L +K+    D Y  ++LID Y KC  V DA  +F    
Sbjct: 426 FVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLH 485

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V   SMI  +AQ   GEEA+KL+ ++    + P+ F   +L+   + L++   G+Q
Sbjct: 486 YKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQ 545

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H  IIK G  +D    N+L++MYAKCG I +    F       ++ W++MI   AQHG 
Sbjct: 546 FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGH 605

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +EALQ+F  M E  V PN++T V VL AC HAG V E  +HF SM+  + I+P  EHYA
Sbjct: 606 AEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYA 665

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            ++++ GR+GK   A E ++ MP +  A+VW +LL A  ++ N E+G++AAEM    +P 
Sbjct: 666 SVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPT 725

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VLLSNIYAS G+W +V  +R+ M  +   KE G SWIEV  +V+TF V  R H  
Sbjct: 726 DSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPE 785

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           ++ IY+ LDE++ L+   GYVP
Sbjct: 786 AELIYSVLDELTSLIKNLGYVP 807



 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 176/552 (31%), Positives = 296/552 (53%), Gaps = 6/552 (1%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           L   +H      G   D F+ N L+  Y+  G   D+R LFD +P R++VSW S+ S Y 
Sbjct: 36  LNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYT 95

Query: 73  HCDFLEEAVCFFKEMVLSGIR-PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
                + A+  F     +    PNEF L+S++ AC  S    LG ++HG ++KL  D+++
Sbjct: 96  QHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANV 155

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           +   AL+++YAK+G +++A+ VF  +     V+WN VI G         AL+LF +M   
Sbjct: 156 YVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIE 215

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + P+ F   SA+ AC+ +   E GRQ+H    +   ++D  V   L+D+Y KC  +  A
Sbjct: 216 GVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAA 275

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           R +F  M  +NL++W  +ISG++QN  + EA ++F  M + G   D    +++L S  S 
Sbjct: 276 RKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSL 335

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            AI   +Q+HA  +K   E+D+Y+ N+LID Y KC H+ +A  +F   +  D ++  +MI
Sbjct: 336 AAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMI 395

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
             Y++     EA+ ++  M+   + P      SLL   ++  A E  KQ+H  IIK G  
Sbjct: 396 EGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTS 455

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D +A ++L+++Y+KC  ++DA   F+ +  + +V W++MI G AQ+ +G+EA+++F Q+
Sbjct: 456 LDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQL 515

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQEHYACMIDILGRA 549
           L  G+ PN  T V+++     A  +A   H   F +   K G+         +ID+  + 
Sbjct: 516 LLSGMAPNEFTFVALVTV---ASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKC 572

Query: 550 GKFQEAMELVDT 561
           G  +E   L ++
Sbjct: 573 GFIKEGRMLFES 584



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 260/483 (53%), Gaps = 8/483 (1%)

Query: 98  SLSSMINACAGSGDSLLGR---KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           SL+ ++ +C  +G   L R    IH  +   G   D+F  N L+  Y+ +G L DA  +F
Sbjct: 17  SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF 76

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ--QMKSSEINPNMFTYTSALKACAGMEL 212
             + H ++VSW +VI+    H  +D A+ LF   Q  S E+ PN F   S L+AC   + 
Sbjct: 77  DRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEV-PNEFLLASVLRACTQSKA 135

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             LG Q+H   +K+++ ++  VG  L+++YAK G MDEA ++FH +P +  + WN VI+G
Sbjct: 136 VSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITG 195

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q G    A  LF  M  EGV  D+  L++ + + ++   +   +Q+H  + ++A E+D
Sbjct: 196 YAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETD 255

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             ++N LID Y KC  +  A K+F      +LV+ T+MI+ Y Q     EA+ ++  M  
Sbjct: 256 TSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQ 315

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
               PD F C+S+LN+C +L+A  QG+Q+H H+IK    +D +  N+L++MYAKC  + +
Sbjct: 316 AGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTE 375

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A   F  + +   +S++AMI G +++    EA+ +F +M    + P+ +T VS+L   + 
Sbjct: 376 ARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL-GVSS 434

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           + L  E       +  K G        + +ID+  +     +A  + + + ++ +  +W 
Sbjct: 435 SQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYK-DMVIWN 493

Query: 573 ALL 575
           +++
Sbjct: 494 SMI 496


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/658 (38%), Positives = 388/658 (58%), Gaps = 33/658 (5%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L  A++VF+ I+ P+++ WN +  G  L      ALKL+  M S  + PN +T+   LK+
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY------------------------ 242
           CA ++  + G Q+H  ++K+  + D  V   L+ MY                        
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 243 -------AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                  A  G ++ AR +F  +P K++++WN +ISG+++ G   EA  LF  M +  V 
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D++T+ TV+ + A   +I + +QVH+      F S+  IVN+LID Y KCG +E A  +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F   S  D+++   +I  Y    L +EAL L+ EM     +P+     S+L+ACA+L A 
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 416 EQGKQVHVHIIKF--GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           + G+ +HV+I K   G  + +    SL++MY+KCG I+ A + F+ +  + + +W+AMI 
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G A HGR   A  +F +M ++ + P+ IT V +L AC+HAG++   +H F SM   + I 
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY CMID+LG +G F+EA E++ TM  + +  +W +LL A +++ NVE+G+  A+ 
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF IEP    ++VLLSNIYA+AG W+ VA++R  + D  +KK PG S IE+   V+ F +
Sbjct: 493 LFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFII 552

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD+ H R++EIY  L+E+  LL +AG+VP     L ++EE  KE  L HHSEKLA+AFGL
Sbjct: 553 GDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGL 612

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I+T P   + + KNLR+C +CH + + ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 613 ISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 255/583 (43%), Gaps = 90/583 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMY-------------------- 40
           +LK+C   K    GLQ+HG V+  G++ D +V  SL+ MY                    
Sbjct: 69  LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128

Query: 41  -----------AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                      A  G    +R +FD IP + VVSWN++ S YV     +EA+  FKEM+ 
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + +RP+E ++ ++I+A A SG   LGR++H +    G+ S++   NAL+D Y+K G +E 
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F  + + D++SWN +I G         AL LFQ+M  S  +PN  T  S L ACA 
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K    + +   +   L+DMY+KCG ++ A  +F+ M  K+L AWN
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    A  +F  M +  +  D  T   +L + +    + + + +       
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHI------- 421

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F S   +Y +   ++ YG                         MI      GL +EA +
Sbjct: 422 -FRSMTHNYKITPKLEHYG------------------------CMIDLLGHSGLFKEAEE 456

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   M    + PD  +  SLL AC      E G++   ++ K    ++  +   L N+YA
Sbjct: 457 MISTMT---MEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIE-PNNPGSYVLLSNIYA 512

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSA------------MIGGLAQHGRGKEALQMFGQM-- 491
             G  ++  R    + D+G+                  I G   H R +E   M  +M  
Sbjct: 513 TAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 572

Query: 492 --LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
              E G +P+      VL            +HH E +   FG+
Sbjct: 573 LLQEAGFVPD---TSEVLQEMEEEFKEGALRHHSEKLAIAFGL 612


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/659 (40%), Positives = 376/659 (57%), Gaps = 43/659 (6%)

Query: 117 KIHGYSIKLGYDSDMFS-ANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           +IH   IK   D + F  A  L  ++A     +L  A +VF +I  PD   WN +I   +
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80

Query: 174 LHEHNDWALKLFQQMKSSEINP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             ++   ++ LF QM+  E  P + ++ +  ++AC  ++    G++LH  ++K+ + SD 
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L++MYAK G ++ AR I   M   +L+ +N++++ +++ G    A  LF  M   
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMP-- 198

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
                                                E D    N++I  +   G V  A
Sbjct: 199 -------------------------------------ERDLVSWNTMIHGHASLGDVGTA 221

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            K+F  +   DL++ +SMI AYA+     EAL+L+ EMQ   + PD     S+L+AC ++
Sbjct: 222 KKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDV 281

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A   GK +H  I +     D   G SLV+MYAKCG ID++ R F+ + +R + +WSAMI
Sbjct: 282 GALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMI 341

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            GLA HG G+ AL  F +M+ + + PN +T + VL AC+H GLV E   +F SM K + +
Sbjct: 342 MGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDV 401

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P  EHY C++DILGRAG+ QEAMEL+ +MPF  +A VW ALLGA RIYKNVE+ + A  
Sbjct: 402 SPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATV 461

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            L  +EP     +VLLSNIY+ A  WD V  VRR MK+  ++K PG S IEV + V+ F 
Sbjct: 462 NLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFV 521

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD+SH  SK+I   L E++  L   GY P+  + L D +E EKE  L HHSEKLA+AFG
Sbjct: 522 AGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFG 581

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           L++T PG+TIR+ KNLR+C DCH + + IS+   R IIVRD NRFHHF NGSCSC  YW
Sbjct: 582 LLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 215/466 (46%), Gaps = 45/466 (9%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIPERSVVSWNSLFSCY 71
           +Q+H +++ T  D + FV   L+     C +  D   +R +FD IP      WN++   Y
Sbjct: 20  IQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79

Query: 72  VHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           ++    +E++  F +M      P + +SLS +I AC    D   G+K+H   +K+G  SD
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F   AL++MYAK G++E A  +  ++ HPD+V +N ++A  V     + A  LF +M  
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMP- 198

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
                                                 + D +    ++  +A  G +  
Sbjct: 199 --------------------------------------ERDLVSWNTMIHGHASLGDVGT 220

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A+ +F    E++LI+W+ +I+ + +     EA  LF  M    V  D+ T+ +VL +   
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGD 280

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
             A+G+ K +H    +   E D  +  SL+D Y KCG +++++++F   +  D+ A ++M
Sbjct: 281 VGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAM 340

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I   A  G GE AL  + +M   +I P+      +L+AC+++   ++G      + K   
Sbjct: 341 IMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYD 400

Query: 431 MSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           +S        +V++  + G + +A      +P     + W A++G 
Sbjct: 401 VSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGA 446



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 64/334 (19%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG------NFID------ 48
           V++AC   KD   G ++H  V+  G  SD FV  +L+ MYAK G      N +D      
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170

Query: 49  -------------------SRRLFDAIPERSVVSWN------------------------ 65
                              +  LFD +PER +VSWN                        
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230

Query: 66  -------SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
                  S+ + Y       EA+  F EM L+ + P++ ++ S+++AC   G   +G+ I
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMI 290

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H    +   + D+    +LVDMYAK G++++++ VF  + + D+ +W+A+I G   H   
Sbjct: 291 HECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFG 350

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG- 237
           + AL  F +M S +I PN  T+   L AC+ + L + G     S+ K+   S  I   G 
Sbjct: 351 ELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGC 410

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           +VD+  + G + EA  +   MP   + I W  ++
Sbjct: 411 VVDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 14/185 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L +G  +H  +     + D  +  SLV MYAKCG+  +S R+F+ +  R 
Sbjct: 274 VLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRD 333

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG----- 115
           V +W+++     +  F E A+  F +M+   I+PN+ +   +++AC+  G    G     
Sbjct: 334 VFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFT 393

Query: 116 --RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGC 172
              K++  S K+ +         +VD+  + G L++A+ + K +   PD + W A++  C
Sbjct: 394 SMSKVYDVSPKIEH------YGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGAC 447

Query: 173 VLHEH 177
            ++++
Sbjct: 448 RIYKN 452



 Score = 43.1 bits (100), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 14/197 (7%)

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD---ADRAFSEIPDRGIVS 467
           N +   Q  Q+H  IIK     + F    L+     C S +D   A   F EIP      
Sbjct: 12  NATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFI 71

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEA-KHHFES 525
           W+ MI         +E++ +F QM     +P +  +L  V+ AC          K H + 
Sbjct: 72  WNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQV 131

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           ++   G     E    +I++  + G  + A  ++D M    +   +  LL      + V 
Sbjct: 132 LKIGLGSDLFVE--TALIEMYAKFGDIEIARNILDEMA-HPDLVPYNVLLA-----EYVR 183

Query: 586 VGQ-HAAEMLFAIEPEK 601
           VG+ + A  LF   PE+
Sbjct: 184 VGEINLAHDLFDRMPER 200


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/690 (37%), Positives = 402/690 (58%), Gaps = 37/690 (5%)

Query: 119 HGYSIKLGYDSDMFSANALVDM---YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           H   +K G  +  ++ + L+++         L  AV+VF+  + P+++ WN ++ G    
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                 L+++ +M S    PN +T+   LK+CA  +  E GRQ+H  ++K+  + D    
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 236 VGLVDMYAKCGSMDEARMIFHL-------------------------------MPEKNLI 264
             L+ MYA+ G +++AR +F                                 + E++++
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL- 323
           +WN +I+G+++N G  EA  LF  M R  V  D+ TL +VL + A   +I + +++H L 
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
                F S   IVN+ I  Y KCG VE A  +F+  S  D+V+  ++I  Y    L +EA
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNSLV 441
           L L+ EM     +P+     S+L ACA+L A + G+ +HV+I K   G  + +    SL+
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MYAKCG I+ A + F+ +  + + SW+AMI G A HGR   A  +F +M ++G+ P+ I
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           TLV +L AC+H+GL+   +H F+S+ + + I P  EHY CMID+LG AG F+EA E++  
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP + +  +W +LL A +++ N+E+ +  A+ L  IEPE S ++VLLSNIYA+AG W++V
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDV 541

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV 681
           A++R  +    +KK PG S IE+   V+ F +GD+ H +S+EIY  L+E+  LL +AG+V
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFV 601

Query: 682 PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           P     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + V KNLR+C +CH + + I
Sbjct: 602 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLI 661

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           SKI  REI+ RD  RFHHFR+G CSC  YW
Sbjct: 662 SKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 165/587 (28%), Positives = 253/587 (43%), Gaps = 97/587 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA----- 55
           +LK+C   K    G Q+H  V+  G + D +   SL+ MYA+ G   D+R++FD      
Sbjct: 89  LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148

Query: 56  --------------------------IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     I ER VVSWN++ + YV     EEA+  FKEM+ 
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDMFSANALVDMYAKVGNLE 148
           + +RP+E +L S+++ACA SG   LGR+IH       G+ S +   NA + +Y+K G++E
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F+ +   D+VSWN +I G         AL LFQ+M  S  +PN  T  S L ACA
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328

Query: 209 GMELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
            +   ++GR +H  + K    + +   +   L+DMYAKCG ++ A  +F+ M  K+L +W
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G   +G    A  LF  M + G+  D  TL  +L + +    + + + +      
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI------ 442

Query: 327 TAFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
             F+S   DY +   ++ YG                         MI      GL +EA 
Sbjct: 443 --FKSVTQDYNITPKLEHYG------------------------CMIDLLGHAGLFKEAE 476

Query: 385 KLYLEMQDREINPDSFVCSSLLNAC---ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           ++   M    + PD  +  SLL AC    NL   E   Q  + I      S       L 
Sbjct: 477 EIIHMMP---MEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVL----LS 529

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSA------------MIGGLAQHGRGKEALQMFG 489
           N+YA  G  +D  R    +  +G+                  I G   H + +E  +M  
Sbjct: 530 NIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLE 589

Query: 490 QM----LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           +M     E G +P+      VL            +HH E +   FG+
Sbjct: 590 EMDVLLEEAGFVPD---TSEVLQEMEEEWKEGALRHHSEKLAIAFGL 633



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 225/515 (43%), Gaps = 40/515 (7%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIPERSVVSWNSLFSCYVH 73
            H  +V TG  +  +  + L+ +     +F     +  +F+   E +++ WN++      
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              L   +  +  MV  G  PN ++   ++ +CA S     GR+IH   +KLG + D ++
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 134 ANALVDMYAKVGNLED-------------------------------AVAVFKDIEHPDI 162
             +L+ MYA+ G LED                               A  VF  I   D+
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           VSWNA+I G V +   + AL+LF++M  + + P+  T  S L ACA     ELGR++H  
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240

Query: 223 LIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
           +       S   +    + +Y+KCG ++ A  +F  +  K++++WN +I G+       E
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK--TAFESDDYIVNSL 339
           A  LF  M R G   +  T+ +VL + A   AI + + +H    K      +   +  SL
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSL 360

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           ID Y KCG +E A ++F       L +  +MI  +A  G    A  L+  M+   I PD 
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                LL+AC++    + G+ +   + + +           ++++    G   +A+    
Sbjct: 421 ITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIH 480

Query: 459 EIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
            +P +   V W +++     HG   E  + F Q L
Sbjct: 481 MMPMEPDGVIWCSLLKACKMHG-NLELAESFAQKL 514


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/692 (38%), Positives = 402/692 (58%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L++   +      L  A++VF+ I+ P+++ WN +  G 
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      A+KL+  M S  + PN +T+   LK+CA +++ + G+Q+H  ++K+  + D 
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138

Query: 233 IVGVGLVDMYAKCGS-------------------------------MDEARMIFHLMPEK 261
            V   L+ MY K G                                ++ A+ +F  +P K
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN +ISG+   G + EA  LF  M +  V  D++T+ TV+ + A   +I + +QVH
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +        S+  IVN+LID Y KCG VE A  +F+  S  D+++  +MI  Y    L +
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
           EAL L+ EM     NP+     S+L ACA L A + G+ +HV+I K   G  + +    S
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG I+ A + F+ +  R + + +AMI G A HGR   A  +F +M ++G+ P+
Sbjct: 379 LIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V +L AC+H+G++   +  F SM + + I P  EHY CMID+LG  G F+EA E++
Sbjct: 439 DITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMI 498

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           +TM  + +  +W +LL A +++ NVE+G+  A+ L  IEPE   ++VLLSNIYA+AG W+
Sbjct: 499 NTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWN 558

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            VA +R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL +AG
Sbjct: 559 EVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L ++EE  K+  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + +
Sbjct: 619 FVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 259/595 (43%), Gaps = 76/595 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIP 57
           +L  C + + L +   +H  ++ TG  +  +  + L+       NF     +  +F+ I 
Sbjct: 8   LLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ 64

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E +++ WN++F  +        A+  +  M+  G+ PN ++   ++ +CA    S  G++
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------------ 159
           IHG+ +KLGY+ D++   +L+ MY K G  +DA  VF    H                  
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184

Query: 160 -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                         D+VSWNA+I+G     +N  AL LF++M  + + P+  T  + + A
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     +LGRQ+H  +    + S+  +   L+D+Y+KCG ++ A  +F  +  K++I+W
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G+       EA  LF  M R G   +  T+ ++L + A   AI   + +H    K
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364

Query: 327 --TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
                 +   +  SLID Y KCG +E A ++F       L AC +MI  +A  G    A 
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAF 424

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            ++  M+   I PD      LL+AC++    + G+++      F  M+  +     +  Y
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI------FRSMTQNYKITPKLEHY 478

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
                                     MI  L   G  KEA +M   M  +   P+ +   
Sbjct: 479 G------------------------CMIDLLGHLGLFKEAEEMINTMTME---PDGVIWC 511

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAGKFQEAMEL 558
           S+L AC   G V E    F   +K   I+P     Y  + +I   AG++ E   +
Sbjct: 512 SLLKACKMHGNV-ELGESFA--QKLIKIEPENPGSYVLLSNIYATAGRWNEVANI 563



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 231/500 (46%), Gaps = 71/500 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDS----------- 49
           +LK+C   K    G Q+HG V+  G++ D +V  SL+ MY K G + D+           
Sbjct: 109 LLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRD 168

Query: 50  --------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                               +++FD IP + VVSWN++ S Y      +EA+  FKEM+ 
Sbjct: 169 VVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK 228

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + ++P+E ++ ++++ACA SG   LGR++H +    G  S++   NAL+D+Y+K G +E 
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S  NPN  T  S L ACA 
Sbjct: 289 ACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQ 348

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   + GR +H  + K    + +   +   L+DMYAKCG ++ A  +F+ M  + L A N
Sbjct: 349 LGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACN 408

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    A  +F  M + G+  D  T   +L + +    + + +++       
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI------- 461

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F S   +Y +   ++ YG                         MI      GL +EA +
Sbjct: 462 -FRSMTQNYKITPKLEHYG------------------------CMIDLLGHLGLFKEAEE 496

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   M    + PD  +  SLL AC      E G+     +IK     +  +   L N+YA
Sbjct: 497 MINTMT---MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIE-PENPGSYVLLSNIYA 552

Query: 446 KCGSIDDADRAFSEIPDRGI 465
             G  ++     + + D+G+
Sbjct: 553 TAGRWNEVANIRALLNDKGM 572


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/702 (36%), Positives = 406/702 (57%), Gaps = 8/702 (1%)

Query: 77  LEEAVCFFK----EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDM 131
           L+EA+ F +    ++VL   + +E ++  ++ AC    D  +GR++H   S    + +D 
Sbjct: 83  LKEALDFLQRESDDVVLDSAQRSE-AMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDF 141

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS- 190
                ++ MY+  G+  D+  VF  +   ++  WNA+++    +E  + A+ +F ++ S 
Sbjct: 142 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 201

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           +E  P+ FT    +KACAG+    LG+ +H    KM++ SD  VG  L+ MY KCG ++E
Sbjct: 202 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 261

Query: 251 A-RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           A + +F LM  K + +WN ++ G+ QN    +A  L+  M   G+  D  T+ ++L + +
Sbjct: 262 AVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
             +++   +++H  +++     D +I  SL+  Y  CG    A  +F       LV+   
Sbjct: 322 RMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNV 381

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI  Y+Q GL +EA+ L+ +M    I P       +  AC+ LSA   GK++H   +K  
Sbjct: 382 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 441

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D F  +S+++MYAK G I  + R F  + ++ + SW+ +I G   HGRGKEAL++F 
Sbjct: 442 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 501

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +ML  G+ P+  T   +L AC+HAGLV +   +F  M     I+P  EHY C++D+LGRA
Sbjct: 502 KMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRA 561

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G+  +A+ L++ MP   ++ +W +LL + RI+ N+ +G+  A  L  +EPEK   +VL+S
Sbjct: 562 GRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLIS 621

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           N++A +G WD+V +VR  MKD  L+K+ G SWIEV  KV+ F +GD      +E+     
Sbjct: 622 NLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWR 681

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            +   ++  GY P   + LHD+EE +K  +L  HSEKLA++FGL+ T  G  +RV KNLR
Sbjct: 682 RLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLR 741

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IC DCH + +FISK+V+R+I+VRD  RFHHFR+G CSCG YW
Sbjct: 742 ICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 157/515 (30%), Positives = 281/515 (54%), Gaps = 6/515 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANS-LVVMYAKCGNFIDSRRLFDAIPER 59
           +L+AC  +KD+ +G ++H +V  +    ++FV N+ ++ MY+ CG+  DSR +FD +  +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++  WN++ S Y   +  E+A+  F E++ ++  +P+ F+L  +I ACAG  D  LG+ I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA-VFKDIEHPDIVSWNAVIAGCVLHEH 177
           HG + K+   SD+F  NAL+ MY K G +E+AV  VF  ++   + SWNA++ G   +  
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL L+ QM  S ++P+ FT  S L AC+ M+    G ++H   ++  +  DP +G+ 
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ +Y  CG    A+++F  M  ++L++WN++I+G+ QNG   EA +LF  M  +G+   
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           +  +  V  + +   A+ + K++H  ++K     D ++ +S+ID Y K G +  + +IF 
Sbjct: 411 EIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFD 470

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                D+ +   +I  Y   G G+EAL+L+ +M    + PD F  + +L AC++    E 
Sbjct: 471 RLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVED 530

Query: 418 GKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           G +    ++    +       + +V+M  + G IDDA R   E+P D     WS+++   
Sbjct: 531 GLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 590

Query: 476 AQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCA 509
             HG      ++  ++LE +   P +  L+S L A
Sbjct: 591 RIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 237/479 (49%), Gaps = 34/479 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDS-RRLFDAIPER 59
           V+KAC    DL LG  +HG+       SD FV N+L+ MY KCG   ++ +R+FD +  +
Sbjct: 214 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTK 273

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V SWN+L   Y       +A+  + +M  SG+ P+ F++ S++ AC+       G +IH
Sbjct: 274 TVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIH 333

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G++++ G   D F   +L+ +Y   G    A  +F  +EH  +VSWN +IAG   +   D
Sbjct: 334 GFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPD 393

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ LF+QM S  I P          AC+ +    LG++LHC  +K  +  D  V   ++
Sbjct: 394 EAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSII 453

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G +  ++ IF  + EK++ +WN++I+G+  +G   EA  LF  M R G+  D  
Sbjct: 454 DMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDF 513

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN------------SLIDAYGKCG 347
           T + +L + +           HA  V+   E  + ++N             ++D  G+ G
Sbjct: 514 TFTGILMACS-----------HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAG 562

Query: 348 HVEDAVKIFKESSA-VDLVACTSMITA---YAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            ++DA+++ +E     D    +S++++   +   GLGE+     LE++  +  P+++V  
Sbjct: 563 RIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK--PENYVLI 620

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           S  N  A    ++  ++V   +   G   D  AG S + +  K  +    D    E+ +
Sbjct: 621 S--NLFAGSGKWDDVRRVRGRMKDIGLQKD--AGCSWIEVGGKVHNFLIGDEMLPELEE 675


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/655 (40%), Positives = 389/655 (59%), Gaps = 14/655 (2%)

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           ++ ++FS NAL+  YAK   +  A  +F  I  PD+VS+N +I           AL LF 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M+   +  + FT++  + AC       L RQLH         S   V   L+  Y+K G
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNH--VGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187

Query: 247 SMDEARMIFHLMPE--KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            ++EA M+F+ M E  ++ ++WN +I  + Q+   ++A +L+  M   G   D  TL++V
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVD 363
           L + +  + +    Q HA ++KT F  + ++ + LID Y KCG  + ++ K+F+E    D
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307

Query: 364 LVACTSMITAYAQFG-LGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQ 420
           LV   +MI+ Y+Q   L  EAL+ + +MQ     PD  SFVC+  ++AC+NLS+  QGKQ
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCA--ISACSNLSSPSQGKQ 365

Query: 421 VHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            H   +K    S+  +  N+LV MY+KCG++ DA + F  +P    V+ +++I G AQHG
Sbjct: 366 FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHG 425

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G E+L +F QML   + P  ITLVS+L AC H G V E K +F  M+  FGI+P  EHY
Sbjct: 426 IGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHY 485

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           +CMID+LGRAGK  EA  L+DTMPF   ++ W ALLGA R Y N+E+ + AA     +EP
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP 545

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             +  +++L+++Y++A  W+  A++R+ M+D  ++K+PG SWIE+  +V+ F   D SH 
Sbjct: 546 TNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHP 605

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDL---HDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           R KEI+  LDE+   + +AGYVP V        +  E EKE +L HHSEKLAVAFGL+ T
Sbjct: 606 RIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFT 665

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G  + V KNLRIC DCH + +F+S I  R+I VRD  RFH F +G CSCG YW
Sbjct: 666 KHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 272/551 (49%), Gaps = 46/551 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID------------ 48
           +LK+C + KDL  G  +H I + +   S  +++N  +++Y+KC                 
Sbjct: 14  ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73

Query: 49  -------------------SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                              +  LFD IP+  +VS+N+L + Y        A+  F EM  
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+  + F+ S +I AC       L R++H  +   G+DS +   N+L+  Y+K G LE+
Sbjct: 134 MGLVMDGFTFSGVITACCNHVG--LIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEE 191

Query: 150 AVAVFKDI--EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           A  VF  +  E  D VSWN++I     H+    AL L++ M       +MFT  S L   
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTF 251

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS-MDEARMIFHLMPEKNLIAW 266
           + +E    G Q H   IK     +  VG GL+DMYAKCG+ M E+R +F  +   +L+ W
Sbjct: 252 SCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVW 311

Query: 267 NIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           N +ISG+ QN    +EA   F  M R G   D  +    + + ++  +    KQ HAL++
Sbjct: 312 NTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAM 371

Query: 326 KTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           K+   S+   V N+L+  Y KCG+++DA K+F+     + V   S+I  YAQ G+G E+L
Sbjct: 372 KSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESL 431

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK--FGFMSDTFAGNSLVN 442
            L+ +M    I P S    S+L+ACA+    E+GK+ + +++K  FG   +    + +++
Sbjct: 432 NLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEPEAEHYSCMID 490

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR---GKEALQMFGQMLEDGVLP 498
           +  + G + +A+R    +P   G  +W+A++G   ++G     ++A   F Q+     +P
Sbjct: 491 LLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550

Query: 499 NHITLVSVLCA 509
            +I L S+  A
Sbjct: 551 -YIMLASMYSA 560


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/701 (36%), Positives = 411/701 (58%), Gaps = 6/701 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC     + LG  VH  + F GF+ D FV +SL+  Y++ G   D+R LFD +P + 
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN + + YV     + A   F EM  +   PN  + + +++ CA       G ++HG
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +  G + D   AN L+ MYAK G+L DA  +F  +   D+V+WN +I+G V +   D 
Sbjct: 273 LVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDE 332

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A  LF +M S+ + P+  T++S L   + G  L++ G+++HC +I+  +  D  +   L+
Sbjct: 333 ASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQ-GKEIHCYIIRNGVSLDVFLKSALI 391

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KC  ++ AR IF      +++    +ISG++ NG +  A  +F W+ +E +  +  
Sbjct: 392 DIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 451

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL++VL + A   A+ + K++H   +K       Y+ ++++D Y KCG ++ A + F   
Sbjct: 452 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 511

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S  D V   SMIT+ +Q G  EEA+ L+ +M       D    S+ L+ACANL A   GK
Sbjct: 512 SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGK 571

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  +++  F SD FA ++L++MY+KCG++D A R F  + ++  VSW+++I     HG
Sbjct: 572 EIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHG 631

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           R K++L +F  ML DG+ P+H+T ++++ AC HAG V E  H+F  M ++ GI    EHY
Sbjct: 632 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 691

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+ GRAG+  EA  ++++MPF  +A VWG LLGA R++ NVE+ + A+  LF ++P
Sbjct: 692 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDP 751

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           + S  +VLLSN++A+AG W++V K+R  MK+  ++K PG SWI+V +  + F   DRSH 
Sbjct: 752 QNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHP 811

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHD----VEESEK 696
           +S +IY  L  +   L K GYVP +   +H     ++ SEK
Sbjct: 812 QSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQTMGLQSSEK 852



 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 178/578 (30%), Positives = 303/578 (52%), Gaps = 4/578 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CT    L  G Q H  ++  G   +  +   L+ MY  CG F+D++ +F  +    
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
              WN +   +      + A+ F+ +M+  G  P++++   +I AC G     LGR +H 
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
               +G++ D+F  ++L+  Y++ G + DA  +F  +   D V WN ++ G V +   D 
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  +F +M+ +E NPN  T+   L  CA   +   G QLH  ++   ++ D  V   L+ 
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG + +AR +F +MP+ +L+ WN +ISG++QNG   EA+ LF  M    +  D  T
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSIT 351

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+ L  ++    +   K++H   ++     D ++ ++LID Y KC  VE A KIF + +
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRT 411

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VD+V CT+MI+ Y   G+   AL+++  +    +  +S   +S+L ACA L+A   GK+
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 471

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H HI+K G     + G+++++MYAKCG +D A + F  I D+  V W++MI   +Q+G+
Sbjct: 472 LHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGK 531

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            +EA+ +F QM   G   + +++ + L AC N   L    + H   M   F      E  
Sbjct: 532 PEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE-- 589

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           + +ID+  + G    A  + DTM  + N   W +++ A
Sbjct: 590 SALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAA 626



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 208/419 (49%), Gaps = 2/419 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L S++  C        GR+ H   +  G   +      L+ MY   G   DA  +F  + 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
                 WN +I G  +    D+AL  + +M      P+ +T+   +KAC G+    LGR 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +  M  + D  VG  L+  Y++ G + +AR +F  MP K+ + WN++++G+++NG 
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
              A  +F  M R     +  T + VL   AS   I    Q+H L V +  E D  + N+
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y KCGH+ DA ++F      DLV    MI+ Y Q G  +EA  L+ EM    + PD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           S   SS L   +  +   QGK++H +II+ G   D F  ++L+++Y KC  ++ A + F 
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           +     IV  +AMI G   +G    AL++F  +L++ +  N +TL SVL AC  AGL A
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC--AGLAA 465


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/600 (39%), Positives = 364/600 (60%), Gaps = 2/600 (0%)

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           +H H+    +    M    ++ N   Y + L  C        G+++H  +IK        
Sbjct: 35  IHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVY 94

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   L+  Y KC S+ +AR +F +MPE+N+++W  +IS + Q G   +A SLF  M R G
Sbjct: 95  LRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSG 154

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              ++ T +TVL S        + +Q+H+  +K  +E+  Y+ +SL+D Y K G + +A 
Sbjct: 155 TEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEAR 214

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            IF+     D+V+CT++I+ YAQ GL EEAL+L+  +Q   +  +    +S+L A + L+
Sbjct: 215 GIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLA 274

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A + GKQVH H+++    S     NSL++MY+KCG++  A R F  + +R ++SW+AM+ 
Sbjct: 275 ALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLV 334

Query: 474 GLAQHGRGKEALQMFGQML-EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK-KFG 531
           G ++HG G+E L++F  M+ E+ V P+ +T+++VL  C+H GL  +    F  M   K  
Sbjct: 335 GYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKIS 394

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           +QP  +HY C++D+LGRAG+ + A E V  MPF+ +A++WG LLGA  ++ N+++G+   
Sbjct: 395 VQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVG 454

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             L  IEPE +  +V+LSN+YASAG W++V  +R  M    + KEPG SWIE+   ++TF
Sbjct: 455 HQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTF 514

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
              D SH R +E+ AK+ E+S    +AGYVP +   LHDV+E +KE++L  HSEKLA+ F
Sbjct: 515 HASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTF 574

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GLIATP    IRV KNLRICVDCH   ++ SKI  RE+ +RD NRFH    G CSCG YW
Sbjct: 575 GLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 205/361 (56%), Gaps = 3/361 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C  K+ +  G +VH  ++ T +    ++   L+V Y KC +  D+R +FD +PER+
Sbjct: 64  VLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERN 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y    +  +A+  F +M+ SG  PNEF+ ++++ +C GS   +LGR+IH 
Sbjct: 124 VVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHS 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IKL Y++ ++  ++L+DMYAK G + +A  +F+ +   D+VS  A+I+G      ++ 
Sbjct: 184 HIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF++++   +  N  TYTS L A +G+   + G+Q+H  L++ E+ S  ++   L+D
Sbjct: 244 ALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLID 303

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCG++  AR IF  + E+ +I+WN ++ G+ ++G   E   LF  M  E  V  D  
Sbjct: 304 MYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSV 363

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T+  VL   S    +  G+       S K + + D      ++D  G+ G VE A +  K
Sbjct: 364 TVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVK 423

Query: 358 E 358
           +
Sbjct: 424 K 424



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 220/432 (50%), Gaps = 11/432 (2%)

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
           RL    P  S    + + + ++H   L EA+     M L G+  N    ++++N C    
Sbjct: 20  RLLSTFPSNS----HHVLNIHIHDTRLREALL---HMALRGLDTNFQDYNTVLNECLRKR 72

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
               G+++H + IK  Y   ++    L+  Y K  +L DA  VF  +   ++VSW A+I+
Sbjct: 73  AIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMIS 132

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
                 +   AL LF QM  S   PN FT+ + L +C G     LGRQ+H  +IK+  ++
Sbjct: 133 AYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEA 192

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
              VG  L+DMYAK G + EAR IF  +PE+++++   +ISG+ Q G D EA  LF  + 
Sbjct: 193 HVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQ 252

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           REG+  +  T ++VL +++   A+   KQVH   +++   S   + NSLID Y KCG++ 
Sbjct: 253 REGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLT 312

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDSFVCSSLLNAC 409
            A +IF       +++  +M+  Y++ G G E L+L+ L + + ++ PDS    ++L+ C
Sbjct: 313 YARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGC 372

Query: 410 ANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIV 466
           ++    ++G  +   +   K     D+     +V+M  + G ++ A     ++P +    
Sbjct: 373 SHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAA 432

Query: 467 SWSAMIGGLAQH 478
            W  ++G  + H
Sbjct: 433 IWGCLLGACSVH 444


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/635 (38%), Positives = 383/635 (60%), Gaps = 7/635 (1%)

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKSSEINPNM 197
           Y ++G+L  A   F  I   ++ SWN ++A    H  N      L+LF++M       + 
Sbjct: 57  YIQLGSLHVASKAFNHITFENLHSWNTILAS---HSKNKCFYDVLQLFKRMLKEGKLVDS 113

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           F    A+KAC G+ L +  +  H   IK+ ++ DP V   L+++Y + GS++EA  +F  
Sbjct: 114 FNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEE 173

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           +P KN + W ++I GHL    +     LF  M R G   D   +  ++++  +  A    
Sbjct: 174 VPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEG 233

Query: 318 KQVHALSVKTAF-ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
           K  H L +K  F +S+ ++  SL+D Y KCG ++ A+K+F+E S  D+V  +++I  +A+
Sbjct: 234 KTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFAR 293

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G   E++ ++ +M    + P+S   +S++ AC++L + +QG+ VH ++I+ G   D   
Sbjct: 294 NGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKN 353

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
             S ++MYAKCG I  A R F +IP++ + SWS MI G   HG   EAL +F +M     
Sbjct: 354 YTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQ 413

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           LPN +T VSVL AC+H+G + E   HF+SM + +GI P++EHYACM+D+LGRAGK  EA+
Sbjct: 414 LPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEAL 473

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
             ++ MP +  AS WGALLGA RI++  E+ +  A+ L  +E ++S  +V+LSNIYA  G
Sbjct: 474 SFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVG 533

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
           MW+ V K R  M +  + K  G + IE+++K+Y F+  DR   ++ +I +  + + + + 
Sbjct: 534 MWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMR 593

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + GYVP +   LHDV++  K+++L  HSEKLA+ FGL+ +  G  IR+ KN+R+C DCHT
Sbjct: 594 ELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHT 653

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + +FIS I  R+II+RDV RFHH ++G CSCG YW
Sbjct: 654 ASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 226/456 (49%), Gaps = 3/456 (0%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           Y + G+   + + F+ I   ++ SWN++ + +       + +  FK M+  G   + F+L
Sbjct: 57  YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
              + AC G       +  H  +IKL  + D + A AL+++Y ++G+LE+A  VF+++  
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 176

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            + V W  +I G +         +LF +M+ S    + F     ++AC  +   + G+  
Sbjct: 177 KNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 236

Query: 220 HCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           H   IK   I S+  +   LVDMY KCG +D A  +F  +  ++++ W+ +I+G  +NG 
Sbjct: 237 HGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGR 296

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            +E+ S+F  M  + V  +  T ++++ + +S  ++   + VH   ++   E D     S
Sbjct: 297 ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTS 356

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
            ID Y KCG +  A ++F +    ++ + ++MI  +   GL  EAL L+ EM+     P+
Sbjct: 357 FIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPN 416

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           S    S+L+AC++    E+G      + + +G          +V++  + G ID+A    
Sbjct: 417 SVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFI 476

Query: 458 SEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           + +P + G  +W A++G    H R + A ++  ++L
Sbjct: 477 NNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 512



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 186/383 (48%), Gaps = 12/383 (3%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           ++F +T  L +   +  + L   LH SL+          G  +   Y + GS+  A   F
Sbjct: 20  SLFRFTKTLASNHQLNAQILVNALHRSLL---------FGPMIFGAYIQLGSLHVASKAF 70

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           + +  +NL +WN +++ H +N    +   LF  M +EG   D   L   +K+        
Sbjct: 71  NHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQ 130

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             K  H+L++K   E D Y+  +L++ Y + G +E+A K+F+E    + V    MI  + 
Sbjct: 131 GAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHL 190

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDT 434
            F       +L+  M+      D FV   L+ AC N+ A ++GK  H   IK  F+ S+ 
Sbjct: 191 NFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNF 250

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F   SLV+MY KCG +D A + F EI  R +V WSA+I G A++GR  E++ MF QML D
Sbjct: 251 FLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLAD 310

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            V PN +T  S++ AC+  G + + +     M +  G++   ++Y   ID+  + G    
Sbjct: 311 SVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVT 369

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A  +   +P + N   W  ++  
Sbjct: 370 AYRVFCQIP-EKNVFSWSTMING 391



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 215/448 (47%), Gaps = 38/448 (8%)

Query: 2   LKACTSKKDLFLGLQV-HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +KAC     LF G ++ H + +    + D +VA +L+ +Y + G+  ++ ++F+ +P ++
Sbjct: 120 VKACFGL-SLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKN 178

Query: 61  VVSWNSLFSCYVHCDFLEEAVCF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            V W  +     H +F EE   F  F  M  SG   + F +  +I AC        G+  
Sbjct: 179 SVIWGVMIKG--HLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 236

Query: 119 HGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           HG  IK  + DS+ F   +LVDMY K G L+ A+ +F++I + D+V W+A+IAG   +  
Sbjct: 237 HGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGR 296

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              ++ +F+QM +  + PN  T+ S + AC+ +   + GR +H  +I+  ++ D      
Sbjct: 297 ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTS 356

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
            +DMYAKCG +  A  +F  +PEKN+ +W+ +I+G   +G   EA +LF         ++
Sbjct: 357 FIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLF---------YE 407

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIVNS-------LIDAYGK 345
             +++ +  SV     +  C   H+  ++  +      S DY +         ++D  G+
Sbjct: 408 MRSVNQLPNSVTFVSVLSACS--HSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGR 465

Query: 346 CGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            G +++A+        E  A    A       + +  L EE  K  L ++  +    S V
Sbjct: 466 AGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQ----SGV 521

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFG 429
              L N  A++  +E  K+  + + + G
Sbjct: 522 YVMLSNIYADVGMWEMVKKTRLKMCEKG 549



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 5/214 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+S   L  G  VHG ++  G + D     S + MYAKCG  + + R+F  IPE++
Sbjct: 322 IVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKN 381

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW+++ + +       EA+  F EM      PN  +  S+++AC+ SG    G   H 
Sbjct: 382 VFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWS-HF 440

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
            S+   Y       +   +VD+  + G +++A++   ++   P   +W A++  C +H  
Sbjct: 441 KSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRR 500

Query: 178 NDWALKLFQQMKSSEINPN-MFTYTSALKACAGM 210
            + A ++ +++   E + + ++   S + A  GM
Sbjct: 501 AELAEEVAKKLLPLESDQSGVYVMLSNIYADVGM 534


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/762 (35%), Positives = 408/762 (53%), Gaps = 107/762 (14%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD------------ 161
           L R +HG  I  G+       N L+D+Y K   L+ A  +F +I  PD            
Sbjct: 32  LARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYC 91

Query: 162 ---------------------IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                                 V +NA+I G   +     A+ LF +MK     P+ FTY
Sbjct: 92  ASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTY 151

Query: 201 TSALKACAGMEL----KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS----MDEAR 252
            S L   AG+ L    ++   Q H + +K        V   LV +Y++C S    +  AR
Sbjct: 152 ASVL---AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSAR 208

Query: 253 MIFHLMPEKN--------------------------------LIAWNIVISGHLQNGGDM 280
            +F  +PEK+                                L+A+N +ISG++  G   
Sbjct: 209 KVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQ 268

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT---AFESDDYIV- 336
           EA  +   M   G+  D+ T  +V+++ A+ + + + KQVHA  ++    +F  D+ +V 
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVT 328

Query: 337 --------------------------NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
                                     N+L+  Y   GH+ +A  IFKE    ++++   M
Sbjct: 329 LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I+  A+ G GEE LKL+  M+     P  +  S  + +CA L AY  G+Q H  ++K GF
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGF 448

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            S   AGN+L+ MYAKCG +++A + F  +P    VSW+A+I  L QHG G EA+ ++ +
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEE 508

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           ML+ G+ P+ IT ++VL AC+HAGLV + + +F SME  + I P  +HYA +ID+L R+G
Sbjct: 509 MLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSG 568

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           KF EA  +++++PF+  A +W ALL   R++ N+E+G  AA+ LF + PE   T++LLSN
Sbjct: 569 KFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSN 628

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
           +YA+ G W+ VA+VR+ M+D  +KKE   SWIE++ +V+TF V D SH  ++ +Y  L +
Sbjct: 629 MYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQD 688

Query: 671 VSDLLNKAGYVPMVETDLHDVE-ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
           +   + + GYVP     LHDVE +  KE +L  HSEK+AVAFGL+  PPG TIR+ KNLR
Sbjct: 689 LGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLR 748

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            C DCH  F F+SK+V R+II+RD  RFHHFRNG CSCG +W
Sbjct: 749 TCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 174/362 (48%), Gaps = 68/362 (18%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGN----FIDSRRLFDAIPERSVVSW------ 64
           +Q H   + +G      V+N+LV +Y++C +       +R++FD IPE+   SW      
Sbjct: 169 VQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTG 228

Query: 65  --------------------------NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
                                     N++ S YV+C   +EA+   + MV SGI  +EF+
Sbjct: 229 YVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFT 288

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
             S+I ACA +    LG+++H Y ++    S  F  N+LV +Y K G   +A A+F+ + 
Sbjct: 289 YPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD-NSLVTLYYKCGKFNEARAIFEKMP 347

Query: 159 HPDIVSWNAVIAGCV--------------LHEHN--DW---------------ALKLFQQ 187
             D+VSWNA+++G V              + E N   W                LKLF  
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           MK     P  + ++ A+K+CA +     G+Q H  L+K+   S    G  L+ MYAKCG 
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGV 467

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           ++EA+ +F  MP  + ++WN +I+   Q+G  +EA  ++  M ++G+  D+ T  TVL +
Sbjct: 468 VEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTA 527

Query: 308 VA 309
            +
Sbjct: 528 CS 529



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 156/314 (49%), Gaps = 35/314 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC + + L LG QVH  V+     S  F  NSLV +Y KCG F ++R +F+ +P + 
Sbjct: 292 VIRACANARLLQLGKQVHAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAKD 350

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----VLS-------------------------- 90
           +VSWN+L S YV    + EA   FKEM    +LS                          
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 91  -GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  P +++ S  I +CA  G    G++ H   +K+G+DS + + NAL+ MYAK G +E+
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEE 470

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF+ +   D VSWNA+IA    H H   A+ ++++M    I P+  T+ + L AC+ 
Sbjct: 471 AQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSH 530

Query: 210 MELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA-WN 267
             L + GR+   S+  +  I         L+D+  + G   EA  I   +P K     W 
Sbjct: 531 AGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWE 590

Query: 268 IVISGHLQNGGDME 281
            ++SG  +  G+ME
Sbjct: 591 ALLSG-CRVHGNME 603



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 197/508 (38%), Gaps = 125/508 (24%)

Query: 194 NPNMFT-----YTSALKACAGMELK--ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           NP++       Y + L+ C  +     +L R +H ++I    +    +   L+D+Y K  
Sbjct: 4   NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSS 63

Query: 247 SMDEARMIFHLMPEKNLIA---------------------------------WNIVISGH 273
            +D AR +F  + E + IA                                 +N +I+G 
Sbjct: 64  ELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGF 123

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA-SFQAIGVCKQVHALSVKTAFESD 332
             N     A +LF  M  EG   D  T ++VL  +A        C Q HA ++K+     
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYV 183

Query: 333 DYIVNSLIDAYGKCGH----VEDAVKIFKESSAVD------------------------- 363
             + N+L+  Y +C      +  A K+F +    D                         
Sbjct: 184 TSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLK 243

Query: 364 -------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                  LVA  +MI+ Y   GL +EAL++   M    I  D F   S++ ACAN    +
Sbjct: 244 GMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQ 303

Query: 417 QGKQVHVHIIK---FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA--- 470
            GKQVH ++++   F F  D    NSLV +Y KCG  ++A   F ++P + +VSW+A   
Sbjct: 304 LGKQVHAYVLRREDFSFHFD----NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLS 359

Query: 471 ----------------------------MIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
                                       MI GLA++G G+E L++F  M  +G  P    
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
               + +C   G     +  F +   K G          +I +  + G  +EA ++  TM
Sbjct: 420 FSGAIKSCAVLGAYCNGQ-QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTM 478

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHA 590
           P   + S W AL+ A        +GQH 
Sbjct: 479 PCLDSVS-WNALIAA--------LGQHG 497



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 22/246 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K+C        G Q H  +V  GFDS     N+L+ MYAKCG   +++++F  +P    
Sbjct: 424 IKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDS 483

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG- 120
           VSWN+L +         EAV  ++EM+  GIRP+  +  +++ AC+ +G    GRK    
Sbjct: 484 VSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNS 543

Query: 121 ----YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               Y I  G D        L+D+  + G   +A ++ + +   P    W A+++GC +H
Sbjct: 544 METVYRIPPGAD----HYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVH 599

Query: 176 EHNDWAL----KLFQQMKSSE----INPNMFTYTSALKACAG----MELKELGRQLHCSL 223
            + +  +    KLF  +   +    +  NM+  T   +  A     M  + + +++ CS 
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSW 659

Query: 224 IKMEIK 229
           I+ME +
Sbjct: 660 IEMETQ 665


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/500 (46%), Positives = 338/500 (67%)

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G++      +A  LF  +++ G   DQ TL+T  K+      +   KQ+HA ++K  F+S
Sbjct: 4   GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           D ++ + ++D Y KCG + +A  +F   SA D VA TSMI+     G  ++AL++Y  M+
Sbjct: 64  DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              + PD +  ++L+ A + ++A EQG+Q+H ++IK   +SD F G SLV+MYAKCG+I+
Sbjct: 124 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 183

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
           DA R F ++  R I  W+AM+ GLAQHG  +EA+ +F  M   G+ P+ ++ + +L AC+
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           HAGL +EA  +  SM   +GI+P  EHY+C++D LGRAG  QEA ++++TMPF+A+AS+ 
Sbjct: 244 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
            ALLGA RI  +VE G+  A  LFA+EP  S+ +VLLSNIYA+A  WD+V   R+ MK  
Sbjct: 304 RALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRK 363

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            +KK+PG SWI+VK+ ++ F V DRSH ++  IY K++E+   + + GYVP  E  L DV
Sbjct: 364 NVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDV 423

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           E+ EKE+ LY+HSEKLA+A+GLI+TP   TIRV KNLR+C DCH + ++ISK+  REI++
Sbjct: 424 EDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVL 483

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD NRFHHFR+G CSCG YW
Sbjct: 484 RDANRFHHFRDGVCSCGDYW 503



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 171/292 (58%), Gaps = 6/292 (2%)

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           ++A+  F  +  SG + ++ +L++   AC        G++IH ++IK G+DSD+   + +
Sbjct: 12  KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           +DMY K G++ +A  VF  I  PD V+W ++I+GCV + + D AL+++ +M+ S + P+ 
Sbjct: 72  LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           +T+ + +KA + +   E GRQLH ++IK++  SDP VG  LVDMYAKCG++++A  +F  
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 191

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M  +N+  WN ++ G  Q+G   EA +LF  M   G+  D+ +   +L + +        
Sbjct: 192 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 251

Query: 318 KQ-VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI-----FKESSAVD 363
            + +H++      E +    + L+DA G+ G V++A K+     FK S++++
Sbjct: 252 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 8/356 (2%)

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           G ++      AL+LF  +  S    +  T  +A KAC  + L + G+Q+H   IK    S
Sbjct: 4   GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           D  V  G++DMY KCG M  A ++F+ +   + +AW  +ISG + NG + +A  ++  M 
Sbjct: 64  DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           +  V  D+ T +T++K+ +   A+   +Q+HA  +K    SD ++  SL+D Y KCG++E
Sbjct: 124 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 183

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           DA ++FK+ +  ++    +M+   AQ G  EEA+ L+  M+   I PD      +L+AC+
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243

Query: 411 NLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           +     +  + +H     +G   +    + LV+   + G + +AD+    +P +   S +
Sbjct: 244 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303

Query: 470 -AMIGGLAQHG---RGKE-ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            A++G     G    GK  A ++F   LE      ++ L ++  A N    V +A+
Sbjct: 304 RALLGACRIQGDVEXGKRVAARLFA--LEPFDSAAYVLLSNIYAAANRWDDVTDAR 357



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 6/290 (2%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           KAC     L  G Q+H   +  GFDSD  V + ++ MY KCG+ +++  +F+ I     V
Sbjct: 38  KACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV 97

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           +W S+ S  V     ++A+  +  M  S + P+E++ +++I A +       GR++H   
Sbjct: 98  AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 157

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           IKL   SD F   +LVDMYAK GN+EDA  +FK +   +I  WNA++ G   H + + A+
Sbjct: 158 IKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAV 217

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMEL-KELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            LF+ MKS  I P+  ++   L AC+   L  E    LH       I+ +      LVD 
Sbjct: 218 NLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDA 277

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME-----AASLF 286
             + G + EA  +   MP K   + N  + G  +  GD+E     AA LF
Sbjct: 278 LGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLF 327



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 1/172 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KA +    L  G Q+H  V+     SD FV  SLV MYAKCGN  D+ RLF  +  R+
Sbjct: 137 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG-DSLLGRKIH 119
           +  WN++          EEAV  FK M   GI P+  S   +++AC+ +G  S     +H
Sbjct: 197 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 256

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
                 G + ++   + LVD   + G +++A  V + +      S N  + G
Sbjct: 257 SMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 282/734 (38%), Positives = 414/734 (56%), Gaps = 66/734 (8%)

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
           HCD    A+C F  M L     N  S ++MI+    +    L R +     K+ +  D+F
Sbjct: 48  HCDL---ALCVFDAMPLR----NSVSYNAMISGYLRNAKFSLARDLFD---KMPH-KDLF 96

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           S N ++  YA+   L DA  +F  +   D+VSWNA+++G V   H D A  +F +M    
Sbjct: 97  SWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP--- 153

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD--PIVGVGLVDMYAKCGSMDE 250
            + N  ++   L A       E  R+L       E KSD   I    L+  Y K   + +
Sbjct: 154 -HKNSISWNGLLAAYVRSGRLEEARRL------FESKSDWELISCNCLMGGYVKRNMLGD 206

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW------------- 288
           AR +F  +P ++LI+WN +ISG+ Q+G   +A  LF          W             
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGML 266

Query: 289 -----MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI----VNSL 339
                ++ E     + + + ++   A ++ + + +++        FE   +      N +
Sbjct: 267 DEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGREL--------FEEMPFPNIGSWNIM 318

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD--REINP 397
           I  Y + G +  A  +F      D V+  ++I  YAQ GL EEA+ + +EM+     +N 
Sbjct: 319 ISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNR 378

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
            +F C+  L+ACA+++A E GKQVH  +++ G+      GN+LV MY KCG ID+A   F
Sbjct: 379 STFCCA--LSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVF 436

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
             +  + IVSW+ M+ G A+HG G++AL +F  M+  GV P+ IT+V VL AC+H GL  
Sbjct: 437 QGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTD 496

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               +F SM K +GI P  +HYACMID+LGRAG  +EA  L+  MPF+ +A+ WGALLGA
Sbjct: 497 RGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGA 556

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
           +RI+ N+E+G+ AAEM+F +EP  S  +VLLSN+YA++G W +V+K+R  M+   ++K P
Sbjct: 557 SRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTP 616

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G SW+EV++K++TFTVGD  H     IYA L+E+   +   GYV   +  LHDVEE EK+
Sbjct: 617 GYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKK 676

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            +L +HSEKLAVAFG++  P G  IRV KNLR+C DCH + + ISKIV R IIVRD +R+
Sbjct: 677 HMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRY 736

Query: 758 HHFRNGSCSCGGYW 771
           HHF  G CSC  YW
Sbjct: 737 HHFSEGICSCRDYW 750



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 238/495 (48%), Gaps = 44/495 (8%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D F  N ++  YA+     D+R LFD++PE+ VVSWN++ S YV    ++EA   F  M 
Sbjct: 94  DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                 N  S + ++ A   SG     R++     +   D ++ S N L+  Y K   L 
Sbjct: 154 ----HKNSISWNGLLAAYVRSGRLEEARRL----FESKSDWELISCNCLMGGYVKRNMLG 205

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA  +F  I   D++SWN +I+G         A +LF++    ++    FT+T+ + A  
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV----FTWTAMVYAYV 261

Query: 209 GMELKELGRQL------------------HCSLIKMEIKSD-----PIVGVG----LVDM 241
              + +  R++                  +    +M++  +     P   +G    ++  
Sbjct: 262 QDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG 321

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y + G + +AR +F +MP+++ ++W  +I+G+ QNG   EA ++   M R+G   +++T 
Sbjct: 322 YCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTF 381

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
              L + A   A+ + KQVH   V+T +E    + N+L+  Y KCG +++A  +F+    
Sbjct: 382 CCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQH 441

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ- 420
            D+V+  +M+  YA+ G G +AL ++  M    + PD      +L+AC++    ++G + 
Sbjct: 442 KDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEY 501

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
            H     +G   ++     ++++  + G +++A      +P +    +W A++G    HG
Sbjct: 502 FHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHG 561

Query: 480 R---GKEALQMFGQM 491
               G++A +M  +M
Sbjct: 562 NMELGEQAAEMVFKM 576



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 180/377 (47%), Gaps = 32/377 (8%)

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           +  + + G+ + A+ VF  +   + VS+NA+I+G + +     A  LF +M     + ++
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP----HKDL 95

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           F++   L   A        R L  S+     + D +    ++  Y + G +DEAR +F  
Sbjct: 96  FSWNLMLTGYARNRRLRDARMLFDSM----PEKDVVSWNAMLSGYVRSGHVDEARDVFDR 151

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP KN I+WN +++ ++++G   EA  LF         ++  + + ++        +G  
Sbjct: 152 MPHKNSISWNGLLAAYVRSGRLEEARRLF----ESKSDWELISCNCLMGGYVKRNMLGDA 207

Query: 318 KQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
           +Q+   + V+     D    N++I  Y + G +  A ++F+ES   D+   T+M+ AY Q
Sbjct: 208 RQLFDQIPVR-----DLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQ 262

Query: 377 FGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
            G+ +EA +++ EM Q RE++ +  +           + Y Q K++ +    F  M    
Sbjct: 263 DGMLDEARRVFDEMPQKREMSYNVMI-----------AGYAQYKRMDMGRELFEEMPFPN 311

Query: 436 AG--NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            G  N +++ Y + G +  A   F  +P R  VSW+A+I G AQ+G  +EA+ M  +M  
Sbjct: 312 IGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKR 371

Query: 494 DGVLPNHITLVSVLCAC 510
           DG   N  T    L AC
Sbjct: 372 DGESLNRSTFCCALSAC 388



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 7/213 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC     L LG QVHG VV TG++    V N+LV MY KCG   ++  +F  +  + +
Sbjct: 385 LSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDI 444

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IHG 120
           VSWN++ + Y    F  +A+  F+ M+ +G++P+E ++  +++AC+ +G +  G +  H 
Sbjct: 445 VSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHS 504

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH---E 176
            +   G   +      ++D+  + G LE+A  + +++   PD  +W A++    +H   E
Sbjct: 505 MNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNME 564

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
             + A ++  +M+    N  M+   S L A +G
Sbjct: 565 LGEQAAEMVFKMEPH--NSGMYVLLSNLYAASG 595



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 173/379 (45%), Gaps = 50/379 (13%)

Query: 217 RQLHCSLIKMEIKS--------DP--IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           RQLH S+  ++  +        DP  +     +  + + G  D A  +F  MP +N +++
Sbjct: 8   RQLHSSIFHVQRPTNYPKPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSY 67

Query: 267 NIVISGHLQNG---------GDMEAASLFPW-MYREGVGFDQTTLSTVL-------KSVA 309
           N +ISG+L+N            M    LF W +   G   ++      +       K V 
Sbjct: 68  NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127

Query: 310 SFQAI--GVCKQVHALSVKTAFE----SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           S+ A+  G  +  H    +  F+     +    N L+ AY + G +E+A ++F+  S  +
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWE 187

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           L++C  ++  Y +  +  +A +L+ ++  R++       +++++  A      Q ++   
Sbjct: 188 LISCNCLMGGYVKRNMLGDARQLFDQIPVRDL----ISWNTMISGYAQDGDLSQARR--- 240

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
            + +   + D F   ++V  Y + G +D+A R F E+P +  +S++ MI G AQ+ R   
Sbjct: 241 -LFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKR--- 296

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
            + M  ++ E+   PN  +   ++      G +A+A++ F+ M ++  +      +A +I
Sbjct: 297 -MDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVS-----WAAII 350

Query: 544 DILGRAGKFQEAMELVDTM 562
               + G ++EAM ++  M
Sbjct: 351 AGYAQNGLYEEAMNMLVEM 369


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/765 (35%), Positives = 413/765 (53%), Gaps = 84/765 (10%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           ++ SG +P    ++ +I+    S +    R +     K     D+ +A  ++  Y+  GN
Sbjct: 22  ILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPK----PDIVAATTMLSAYSAAGN 77

Query: 147 LEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           ++ A  +F    +   D VS+NA+I           AL+LF QMK     P+ FT++S L
Sbjct: 78  IKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVL 137

Query: 205 KACAGMELKELG-RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS---------MDEARMI 254
            A + +  +E   +QLHC + K    S P V   L+  Y  C S         M  AR +
Sbjct: 138 GALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKL 197

Query: 255 FHLMPEKN---------------------------------LIAWNIVISGHLQNGGDME 281
           F   P                                     +AWN +ISG++  G   E
Sbjct: 198 FDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEE 257

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV----N 337
           A  L   M+  G+  D+ T ++V+ + ++     + +QVHA  ++T  +   + V    N
Sbjct: 258 AFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNN 317

Query: 338 SLIDAYGKCG-------------------------------HVEDAVKIFKESSAVDLVA 366
           +LI  Y +CG                                +E+A  IF+E     L+ 
Sbjct: 318 ALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLT 377

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T MI+  AQ G GEE LKL+ +M+   + P  +  +  + +C+ L + + G+Q+H  II
Sbjct: 378 WTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII 437

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           + G  S    GN+L+ MY++CG ++ AD  F  +P    VSW+AMI  LAQHG G +A+Q
Sbjct: 438 QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQ 497

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           ++ +ML++ +LP+ IT +++L AC+HAGLV E +H+F++M   +GI P ++HY+ +ID+L
Sbjct: 498 LYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLL 557

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
            RAG F EA  + ++MPF+  A +W ALL    I+ N+E+G  AA+ L  + P++  T++
Sbjct: 558 CRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYI 617

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
            LSN+YA+ G WD VA+VR+ M++  +KKEPG SWIEV++ V+ F V D  H     +Y 
Sbjct: 618 SLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYR 677

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
            L+++   + K GYVP  +  LHD+E  +KE  L  HSEKLAV +G++  P GATIRV K
Sbjct: 678 YLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFK 737

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLRIC DCH +F++ISK+V REIIVRD  RFHHFRNG CSC  YW
Sbjct: 738 NLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 212/483 (43%), Gaps = 91/483 (18%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           DE    +++  Y +  + + +R L + + +   V+WN++ S YVH  F EEA    + M 
Sbjct: 207 DEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMH 266

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD----MFSANALVDMYAKV 144
             GI+ +E++ +S+I+A + +G   +GR++H Y ++          +   NAL+ +Y + 
Sbjct: 267 SLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRC 326

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCV----LHEHND------------WA------- 181
           G L +A  VF  +   D+VSWNA+++GCV    + E N             W        
Sbjct: 327 GKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLA 386

Query: 182 --------LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                   LKLF QMK   + P  + Y  A+ +C+ +   + G+QLH  +I++   S   
Sbjct: 387 QNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLS 446

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  L+ MY++CG ++ A  +F  MP  + ++WN +I+   Q+G  ++A  L+  M +E 
Sbjct: 447 VGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKED 506

Query: 294 VGFDQTTLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
           +  D+ T  T+L + +           F  + VC  +         E D Y  + LID  
Sbjct: 507 ILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITP-------EEDHY--SRLIDLL 557

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            + G       +F E+  V                            +     P + +  
Sbjct: 558 CRAG-------MFSEAKNVT---------------------------ESMPFEPGAPIWE 583

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           +LL  C      E G Q    +++     D T+   SL NMYA  G  D+  R    + +
Sbjct: 584 ALLAGCWIHGNMELGIQAADRLLELMPQQDGTYI--SLSNMYAALGQWDEVARVRKLMRE 641

Query: 463 RGI 465
           RG+
Sbjct: 642 RGV 644



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/590 (23%), Positives = 241/590 (40%), Gaps = 113/590 (19%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE------------------ 58
           VH  ++ +GF     + N L+  Y K  N   +R LFD IP+                  
Sbjct: 18  VHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGN 77

Query: 59  ---------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
                          R  VS+N++ + + H      A+  F +M   G  P+ F+ SS++
Sbjct: 78  IKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVL 137

Query: 104 NACAGSGDSLLG-RKIHGYSIKLGYDSDMFSANALVDMYAKVGN--------LEDAVAVF 154
            A +   D     +++H    K G  S     NAL+  Y    +        L  A    
Sbjct: 138 GALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKL 197

Query: 155 KDIEHP---DIVSWNAVIAGCVLHE----------------------------HNDW--- 180
            D   P   D  +W  +IAG V ++                            H  +   
Sbjct: 198 FDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEE 257

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP----IVGV 236
           A  L ++M S  I  + +TYTS + A +   L  +GRQ+H  +++  ++        V  
Sbjct: 258 AFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNN 317

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWN----------------------------- 267
            L+ +Y +CG + EAR +F  MP K+L++WN                             
Sbjct: 318 ALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLT 377

Query: 268 --IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
             ++ISG  QNG   E   LF  M  EG+       +  + S +   ++   +Q+H+  +
Sbjct: 378 WTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII 437

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           +   +S   + N+LI  Y +CG VE A  +F     VD V+  +MI A AQ G G +A++
Sbjct: 438 QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQ 497

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMY 444
           LY +M   +I PD     ++L+AC++    ++G+     + + +G   +    + L+++ 
Sbjct: 498 LYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLL 557

Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            + G   +A      +P + G   W A++ G   HG  +  +Q   ++LE
Sbjct: 558 CRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLE 607



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 37/309 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVA---NSLVVMYAKCGNFIDSRRLFDAI 56
           V+ A ++     +G QVH  V+ T    S  FV    N+L+ +Y +CG  +++RR+FD +
Sbjct: 280 VISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKM 339

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV---------------------------- 88
           P + +VSWN++ S  V+   +EEA   F+EM                             
Sbjct: 340 PVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFN 399

Query: 89  ---LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
              L G+ P +++ +  I +C+  G    G+++H   I+LG+DS +   NAL+ MY++ G
Sbjct: 400 QMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCG 459

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +E A  VF  + + D VSWNA+IA    H H   A++L+++M   +I P+  T+ + L 
Sbjct: 460 LVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILS 519

Query: 206 ACAGMELKELGRQLHCSL-IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNL 263
           AC+   L + GR    ++ +   I  +      L+D+  + G   EA+ +   MP E   
Sbjct: 520 ACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGA 579

Query: 264 IAWNIVISG 272
             W  +++G
Sbjct: 580 PIWEALLAG 588



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 142/361 (39%), Gaps = 84/361 (23%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           + +A        + VHA  + + F+    I+N LID Y K  ++  A  +F +    D+V
Sbjct: 4   RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIV 63

Query: 366 ACTSMITAYAQFGL---------------------------------GEEALKLYLEMQD 392
           A T+M++AY+  G                                  G  AL+L+++M+ 
Sbjct: 64  AATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKR 123

Query: 393 REINPDSFVCSSLLNACANLSAYE-QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS-- 449
               PD F  SS+L A + ++  E   +Q+H  + K+G +S     N+L++ Y  C S  
Sbjct: 124 LGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSP 183

Query: 450 -------IDDADRAFSEIP---------------------------------DRGIVSWS 469
                  +  A + F E P                                 D   V+W+
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWN 243

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMI G    G  +EA  +  +M   G+  +  T  SV+ A ++AGL    +    +   +
Sbjct: 244 AMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGR-QVHAYVLR 302

Query: 530 FGIQPMQEHYA-----CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
             +QP   H+       +I +  R GK  EA  + D MP +   S W A+L      + +
Sbjct: 303 TVVQP-SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVS-WNAILSGCVNARRI 360

Query: 585 E 585
           E
Sbjct: 361 E 361



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 44/267 (16%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + +C+    L  G Q+H  ++  G DS   V N+L+ MY++CG    +  +F  +P    
Sbjct: 417 IASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDS 476

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ +         +A+  +++M+   I P+  +  ++++AC+ +G    GR     
Sbjct: 477 VSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFD- 535

Query: 122 SIKLGY----DSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           ++++ Y    + D +S   L+D+  + G   +A  V + +   P    W A++AGC +H 
Sbjct: 536 TMRVCYGITPEEDHYS--RLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHG 593

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
                              NM                ELG Q    L+++  + D    +
Sbjct: 594 -------------------NM----------------ELGIQAADRLLELMPQQDGTY-I 617

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNL 263
            L +MYA  G  DE   +  LM E+ +
Sbjct: 618 SLSNMYAALGQWDEVARVRKLMRERGV 644


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/747 (35%), Positives = 431/747 (57%), Gaps = 19/747 (2%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MYA C +  D++  FDA+ +R++ SW  L + +      +E +   + M   G+RP+  +
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 99  LSSMINACAGSGDSLL-GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
             + + +C G  +SL  G +IH   +    + D   +NAL++MY K G+L  A  VF  +
Sbjct: 61  FITALGSC-GDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119

Query: 158 EHP-DIVSWNAVIAGCVLHEHNDW-ALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
           E   +++SW+ +     LH  N W AL+ F+ M    I        + L AC+   L + 
Sbjct: 120 ERTRNVISWSIMAGAHALH-GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD 178

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE--KNLIAWNIVISGH 273
           GR +H  +     +S+ +V   ++ MY +CG+++EAR +F  M E  +++++WNI++S +
Sbjct: 179 GRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTY 238

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           + N    +A  L+  M    +  D+ T  ++L + +S + +G+ + +H   V    E + 
Sbjct: 239 VHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV 295

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+L+  Y KCG   +A  +F +     +++ T++I+AY +  L  EA  L+ +M + 
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 394 EIN-------PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           E N       PD+    ++LNACA++SA EQGK V       G  SD   G ++VN+Y K
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 415

Query: 447 CGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           CG I++A R F  +  R  V  W+AMI   AQ G+  EAL++F +M  +GV P+  + VS
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 475

Query: 506 VLCACNHAGLVAEAKHHFESMEKKF-GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           +L AC+H GL  + K +F SM  ++  +    +H+ C+ D+LGR G+ +EA E ++ +P 
Sbjct: 476 ILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPV 535

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           + +A  W +LL A R +++++  +  A  L  +EP  ++ +V LSNIYA    W  VAKV
Sbjct: 536 KPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKV 595

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R+FM +  +KKE G+S IE+   ++ F  GD +H R++EI  +L ++   + + GYVP  
Sbjct: 596 RKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDT 655

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKI 744
           +  LH V+E EKE+LL+ HSE+LA+A GLI+TP G  +RV KNLR+C DCHT+ + ISKI
Sbjct: 656 KMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKI 715

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
             R+I+VRD  RFH F++G CSC  YW
Sbjct: 716 AGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 272/506 (53%), Gaps = 17/506 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-RS 60
           L +C   + L  G+++H +VV +  + D  V+N+L+ MY KCG+   ++R+F  +   R+
Sbjct: 65  LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 124

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW+ +   +     + EA+  F+ M+L GI+  + ++ ++++AC+       GR IH 
Sbjct: 125 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHS 184

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSWNAVIAGCVLHEHN 178
                G++S++  ANA++ MY + G +E+A  VF  ++    D+VSWN +++  V ++  
Sbjct: 185 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRG 244

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A++L+Q+M   ++ P+  TY S L AC+  E   LGR LH  ++  E++ + IVG  L
Sbjct: 245 KDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNAL 301

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR------- 291
           V MYAKCGS  EAR +F  M ++++I+W  +IS +++     EA  LF  M         
Sbjct: 302 VSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 361

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           + V  D     T+L + A   A+   K V   +      SD  +  ++++ YGKCG +E+
Sbjct: 362 QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 421

Query: 352 AVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           A +IF    S  D+    +MI  YAQFG   EALKL+  M+   + PDSF   S+L AC+
Sbjct: 422 ARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS 481

Query: 411 NLSAYEQGKQVHVHI-IKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIPDR-GIVS 467
           +    +QGK     +  ++  ++ T      + ++  + G + +A+    ++P +   V+
Sbjct: 482 HTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVA 541

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLE 493
           W++++     H   K A ++  ++L 
Sbjct: 542 WTSLLAACRNHRDLKRAKEVANKLLR 567



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 202/387 (52%), Gaps = 18/387 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           +L AC+S   +  G  +H  +  +GF+S+  VAN+++ MY +CG   ++R++FDA+ E  
Sbjct: 166 ILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEAL 225

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R VVSWN + S YVH D  ++A+  ++ M L   RP++ +  S+++AC+ + D  LGR +
Sbjct: 226 RDVVSWNIMLSTYVHNDRGKDAIQLYQRMQL---RPDKVTYVSLLSACSSAEDVGLGRVL 282

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +    + ++   NALV MYAK G+  +A AVF  +E   I+SW  +I+  V     
Sbjct: 283 HKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLV 342

Query: 179 DWALKLFQQM-------KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
             A  LFQQM        S  + P+   + + L ACA +   E G+ +        + SD
Sbjct: 343 AEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSD 402

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAASLFPWMY 290
             VG  +V++Y KCG ++EAR IF  +  + ++  WN +I+ + Q G   EA  LF  M 
Sbjct: 403 KAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME 462

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN---SLIDAYGKCG 347
            EGV  D  +  ++L +  S   +    + +  S+ T + +    +     + D  G+ G
Sbjct: 463 MEGVRPDSFSFVSILLA-CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGG 521

Query: 348 HVEDAVKIF-KESSAVDLVACTSMITA 373
            +++A +   K     D VA TS++ A
Sbjct: 522 RLKEAEEFLEKLPVKPDAVAWTSLLAA 548



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 154/294 (52%), Gaps = 12/294 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC+S +D+ LG  +H  +V    + +  V N+LV MYAKCG+  ++R +FD + +RS
Sbjct: 266 LLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS 325

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-------LSGIRPNEFSLSSMINACAGSGDSL 113
           ++SW ++ S YV    + EA   F++M+          ++P+  +  +++NACA      
Sbjct: 326 IISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALE 385

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGC 172
            G+ +   +   G  SD     A+V++Y K G +E+A  +F  +   PD+  WNA+IA  
Sbjct: 386 QGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVY 445

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL-IKMEIKSD 231
                +  ALKLF +M+   + P+ F++ S L AC+   L++ G+    S+  +    + 
Sbjct: 446 AQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTR 505

Query: 232 PIVGVGLV-DMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAA 283
            I   G V D+  + G + EA      +P K + +AW  +++   +N  D++ A
Sbjct: 506 TIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA-CRNHRDLKRA 558


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/689 (37%), Positives = 390/689 (56%), Gaps = 33/689 (4%)

Query: 116 RKIHGYSIKLGYDSD-MFSANALVDMYA-KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH ++IK+G  SD +F    +    A + G +  A  VF  I  P +  WN +I G  
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
              H    + ++  M +S I P+ FT+   LK        + G+ L    +K    S+  
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V    + M++ C  +D AR +F +     ++ WNI++SG+ +     ++  LF  M + G
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG 203

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  +  TL  +L + +  + +   K ++        E +  + N LID +  CG +++A 
Sbjct: 204 VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQ 263

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGE-------------------------------E 382
            +F      D+++ TS++T +A  G  +                               E
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL L+ EMQ   + PD F   S+L ACA+L A E G+ V  +I K    +DTF GN+L++
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALID 383

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY KCG++  A + F E+  +   +W+AMI GLA +G G+EAL MF  M+E  + P+ IT
Sbjct: 384 MYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEIT 443

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            + VLCAC HAG+V + +  F SM  + GI+P   HY CM+D+LGRAG+ +EA E++  M
Sbjct: 444 YIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM 503

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           P + N+ VWG+LLGA R++KNV++ + AA+ +  +EPE  + +VLL NIYA+   W+N+ 
Sbjct: 504 PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLR 563

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           +VR+ M +  +KK PG S +E+   VY F  GD+SH +SKEIYAKL+ +   L KAGY P
Sbjct: 564 QVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSP 623

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
                  D+ E +KE  LY HSEKLA+A+ LI++ PG TIR+ KNLR+CVDCH   + +S
Sbjct: 624 DTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVS 683

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  +RE+IVRD  RFHHFR+GSCSC  +W
Sbjct: 684 EAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 260/549 (47%), Gaps = 44/549 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           +L+ C S   L    Q+H   +  G  SD      ++      + G  I +R++FDAIP+
Sbjct: 13  LLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQ 69

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            ++  WN++   Y   +  +  V  +  M+ S I+P+ F+   ++     +     G+ +
Sbjct: 70  PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVL 129

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
             +++K G+DS++F   A + M++    ++ A  VF   +  ++V+WN +++G    +  
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQF 189

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             +  LF +M+   ++PN  T    L AC+ ++  E G+ ++  +    ++ + I+   L
Sbjct: 190 KKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249

Query: 239 VDMYAKCGSMDEARMIFHLM-------------------------------PEKNLIAWN 267
           +DM+A CG MDEA+ +F  M                               PE++ ++W 
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G+L+    +EA +LF  M    V  D+ T+ ++L + A   A+ + + V     K 
Sbjct: 310 AMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 369

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           + ++D ++ N+LID Y KCG+V  A K+FKE    D    T+MI   A  G GEEAL ++
Sbjct: 370 SIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMF 429

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAK 446
             M +  I PD      +L AC +    E+G+   + + ++ G   +      +V++  +
Sbjct: 430 SNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGR 489

Query: 447 CGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQML----EDGVLPNHI 501
            G +++A      +P +   + W +++G    H   + A     Q+L    E+G +  ++
Sbjct: 490 AGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAV--YV 547

Query: 502 TLVSVLCAC 510
            L ++  AC
Sbjct: 548 LLCNIYAAC 556



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 222/542 (40%), Gaps = 87/542 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK  T    L  G  +    V  GFDS+ FV  + + M++ C     +R++FD      
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN + S Y      +++   F EM   G+ PN  +L  M++AC+   D   G+ I+ 
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y      + ++   N L+DM+A  G +++A +VF ++++ D++SW +++ G         
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292

Query: 174 ---------LHEHNDW---------------ALKLFQQMKSSEINPNMFTYTSALKACAG 209
                      ++  W               AL LF++M+ S + P+ FT  S L ACA 
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   ELG  +   + K  IK+D  VG  L+DMY KCG++ +A+ +F  M  K+   W  +
Sbjct: 353 LGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAM 412

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I G   NG   EA ++F  M    +  D+ T   VL           C   HA       
Sbjct: 413 IVGLAINGHGEEALAMFSNMIEASITPDEITYIGVL-----------CACTHA------- 454

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIF-----KESSAVDLVACTSMITAYAQFGLGEEAL 384
                            G VE     F     +     ++     M+    + G  EEA 
Sbjct: 455 -----------------GMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAH 497

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           ++ + M    + P+S V  SLL AC      +  +     I++     +      L N+Y
Sbjct: 498 EVIVNM---PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELE-PENGAVYVLLCNIY 553

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSA------------MIGGLAQHGRGKEALQMFGQML 492
           A C   ++  +    + +RGI                  + G   H + KE       M+
Sbjct: 554 AACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMM 613

Query: 493 ED 494
           +D
Sbjct: 614 QD 615



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 162/347 (46%), Gaps = 38/347 (10%)

Query: 202 SALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA--KCGSMDEARMIFHLM 258
           S L+ C  M +LK    Q+H   IKM + SDP+    ++      + G M  AR +F  +
Sbjct: 12  SLLEKCKSMYQLK----QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAI 67

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P+  L  WN +I G+ +        S++  M    +  D+ T   +LK      A+   K
Sbjct: 68  PQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGK 127

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            +   +VK  F+S+ ++  + I  +  C  V+ A K+F    A ++V    M++ Y +  
Sbjct: 128 VLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVK 187

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             +++  L++EM+ R ++P+S     +L+AC+ L   E GK ++ +I       +    N
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILEN 247

Query: 439 SLVNMYAKCGSIDDAD-------------------------------RAFSEIPDRGIVS 467
            L++M+A CG +D+A                                + F +IP+R  VS
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           W+AMI G  +  R  EAL +F +M    V P+  T+VS+L AC H G
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG 354



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 34/354 (9%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID--AYGKCGHVEDAV 353
           F ++ +S + K  + +Q     KQ+H+ ++K    SD      +I      + G +  A 
Sbjct: 6   FGESPISLLEKCKSMYQ----LKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYAR 61

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F       L    +MI  Y++    +  + +YL M    I PD F    LL       
Sbjct: 62  QVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNM 121

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A + GK +  H +K GF S+ F   + ++M++ C  +D A + F       +V+W+ M+ 
Sbjct: 122 ALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLS 181

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM-----EK 528
           G  +  + K++  +F +M + GV PN +TLV +L AC+    +   KH ++ +     E+
Sbjct: 182 GYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVER 241

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
              ++ +      +ID+    G+  EA  + D M  +   S    + G A I      GQ
Sbjct: 242 NLILENV------LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANI------GQ 289

Query: 589 -HAAEMLFAIEPEKSSTHVLLSNIYAS-AGMWDNVAKVRRFMKDNKLKKEPGMS 640
              A   F   PE+          Y S   M D   ++ RF++   L +E  MS
Sbjct: 290 IDLARKYFDQIPERD---------YVSWTAMIDGYLRMNRFIEALALFREMQMS 334


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/657 (36%), Positives = 391/657 (59%), Gaps = 1/657 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++IH   I  G   + F +N+L++ Y   G L DA  +F    + ++VSW  +I+G   +
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +    A+ +F++M      PN  T +S L A A + L  + + +HC  ++   + +  V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LVDMY+K G M  AR +F  M E+N++ WN ++SG+  +G   EA  LF  M R+G+ 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  T+ +++ +  S   + V   +H   ++T +E+D +I  +L+D Y     V+DA ++
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSA 414
           F E S  D+ A T M+T ++     + A+K + +M   + +  DS     +L++C++  A
Sbjct: 281 FSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGA 340

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            +QG++VH   IK  F ++ F G+++++MYA CG+++DA R F  + ++ +V W+AMI G
Sbjct: 341 LQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAG 400

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              +G G +A+ +F QM   G+ P+  T VSVL AC+HAG+V E    F  M K   + P
Sbjct: 401 NGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIP 460

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             +HYAC+IDILGRAG+   A   ++ MPFQ +  V+  LLGA RI+ N+++G   ++ +
Sbjct: 461 NLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKI 520

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F +EP  +  +VLLSN+YA AG W+ V   R  ++  ++KK+PG S IE+  ++YTF  G
Sbjct: 521 FEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAG 580

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           ++ H +  +I   L  +   + KAGYVP     L DV +  K+ +LYHHSEK+A+AFGL+
Sbjct: 581 EKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLM 640

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T P   IR+ KNLR C DCHT+ +F+SK+  R ++++D NRFH F++G CSC  YW
Sbjct: 641 RTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 254/488 (52%), Gaps = 3/488 (0%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           KDL    Q+H  ++ +G   + F++NSL+  Y  CG   D++++F   P ++VVSW  L 
Sbjct: 35  KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILI 94

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S     D   EA+  F+EM++   +PN  ++SS++ A A  G   + + +H + ++ G++
Sbjct: 95  SGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE 154

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            ++F   ALVDMY+K G +  A  +F+ +   ++V+WNA+++G   H  ++ A+ LF  M
Sbjct: 155 GNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +   +  + +T  S + A   +   ++G  +H  +I+   ++D  +   L+D+Y     +
Sbjct: 215 RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKS 307
           D+A  +F  M  K++ AW ++++G         A   F  M   + +  D   L  +L S
Sbjct: 275 DDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSS 334

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            +   A+   ++VHAL++KT F ++ ++ +++ID Y  CG++EDA + F      D+V  
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCW 394

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            +MI      G G +A+ L+L+M+   ++PD     S+L AC++     +G Q+  H++K
Sbjct: 395 NAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK 454

Query: 428 FGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEAL 485
              +       + ++++  + G +D A    + +P       +S ++G    HG  K   
Sbjct: 455 TSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGH 514

Query: 486 QMFGQMLE 493
           ++  ++ E
Sbjct: 515 EISQKIFE 522



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 203/405 (50%), Gaps = 16/405 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A  +   + +   VH   V  GF+ + FV  +LV MY+K G    +R+LF+++ ER+
Sbjct: 128 VLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERN 187

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN++ S Y    F EEA+  F  M   G+  + +++ S+I A    G   +G  IHG
Sbjct: 188 VVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHG 247

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ GY++D     AL+D+Y     ++DA  VF ++   D+ +W  ++ G     H D 
Sbjct: 248 FIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDR 307

Query: 181 ALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A+K F +M     +  +       L +C+     + GR++H   IK    ++  VG  ++
Sbjct: 308 AIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVI 367

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYA CG++++A+  F+ M EK+++ WN +I+G+  NG   +A  LF  M   G+  D++
Sbjct: 368 DMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL------IDAYGKCGHVEDAV 353
           T  +VL + +    +    Q+    VKT+     +++ +L      ID  G+ G ++ A 
Sbjct: 428 TFVSVLYACSHAGMVYEGLQIFYHMVKTS-----HVIPNLQHYACVIDILGRAGQLDAAY 482

Query: 354 KIFKESS-AVDLVACTSMITA---YAQFGLGEEALKLYLEMQDRE 394
                     D    ++++ A   +    LG E  +   EM+  +
Sbjct: 483 SFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPND 527


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/737 (35%), Positives = 418/737 (56%), Gaps = 3/737 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+++ M  + G    + R+F  +PER V SWN +   Y     L+EA+  +  M+ +G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RP+ ++   ++ +C G  D  +GR++H + ++ G+  ++   NAL+ MYAK G++  A 
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D +SWNA+IAG   +   +  L+LF  M   E+ PN+ T TS   A   + 
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
                +++H   +K     D      L+ MYA  G M +AR +F  M  ++ + W  +IS
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ +NG   +A  ++  M    V  D  T+++ L + A   ++ V  ++H L+    F S
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFIS 424

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + N++++ Y K   ++ A+++FK     D+V+ +SMI  +       EAL  +  M 
Sbjct: 425 YIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 484

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             ++ P+S    + L ACA   A   GK++H H+++ G   + +  N+L+++Y KCG   
Sbjct: 485 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F     + +VSW+ MI G   HG G  AL  F QM++ G  P+ +T V++LCAC+
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACS 603

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             G+V+E    F SM +K+ I P  +HYACM+D+L RAG+  EA   ++ MP   +A+VW
Sbjct: 604 RGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVW 663

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL   RI+++VE+G+ AA+ + A+EP  +  HVLL ++YA A +WD +A+VR+ M++ 
Sbjct: 664 GALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREK 723

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L  + G SW+EVK  V+ F   D SH + +EI   L+ + + +  +GY P VE+   + 
Sbjct: 724 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAP-VESHCPE- 781

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E  K+ +   HSE+LAVAFGLI T PG +I V KN   C  CH   + IS IV R+IIV
Sbjct: 782 DEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIV 841

Query: 752 RDVNRFHHFRNGSCSCG 768
           RD  + HHF++GSCSCG
Sbjct: 842 RDSKQLHHFKDGSCSCG 858



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 244/480 (50%), Gaps = 3/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL++C    D  +G +VH  V+  GF  +  V N+L+ MYAKCG+ + +R++FD++    
Sbjct: 195 VLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMD 254

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ + +         +  F  M+   ++PN  +++S+  A     D    +++HG
Sbjct: 255 CISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHG 314

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G+  D+   N+L+ MYA +G +  A  VF  ++  D ++W A+I+G   +   D 
Sbjct: 315 LAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK 374

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+++  M+ + ++P+  T  SAL ACA +   ++G +LH         S  +V   +++
Sbjct: 375 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILE 434

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +D+A  +F  M EK++++W+ +I+G   N  + EA   F  M  + V  +  T
Sbjct: 435 MYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVT 493

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  A+   K++HA  ++   E + Y+ N+LID Y KCG    A   F    
Sbjct: 494 FIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHG 553

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D+V+   MI  +   G G+ AL  + +M      PD     +LL AC+      +G +
Sbjct: 554 AKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWE 613

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           + H    K+  + +      +V++ ++ G + +A    +E+P       W A++ G   H
Sbjct: 614 LFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 673


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/570 (42%), Positives = 360/570 (63%), Gaps = 4/570 (0%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIK-SDPIVGVGLV-DMYAKCGSMDEARMIFHLMPEK 261
           L +CA  + K   RQ+H   I+  +  ++P +G  L+  + + C  M  A  IF  +   
Sbjct: 46  LLSCASSKFK--FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNP 103

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           N+  WN +I G+ ++   M A  L+  M+   +  D  T   +LK++A    +   ++VH
Sbjct: 104 NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +++++  FES  ++ N+L+  Y  CGH E A K+F+  +  +LV   S+I  YA  G   
Sbjct: 164 SIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPN 223

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EAL L+ EM  R + PD F   SLL+ACA L A   G++ HV+++K G   +  AGN+L+
Sbjct: 224 EALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALL 283

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           ++YAKCGSI  A + F E+ ++ +VSW+++I GLA +G GKEAL++F ++   G++P+ I
Sbjct: 284 DLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEI 343

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T V VL AC+H G+V E   +F+ M++++GI P  EHY CM+D+LGRAG  ++A E +  
Sbjct: 344 TFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQN 403

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP Q NA VW  LLGA  I+ ++ +G+ A   L  +EP+ S  +VLLSN+YAS   W +V
Sbjct: 404 MPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDV 463

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV 681
            KVRR M    +KK PG S +E++++++ F +GDRSH +++EIY KL E++ LL   GYV
Sbjct: 464 HKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYV 523

Query: 682 PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           P +   L D+EE EKE  L +HSEK+A+AF LI T  G  IRV KNLR+C DCH + + I
Sbjct: 524 PHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLI 583

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           SK+  REI+VRD +RFHHF++G CSC  YW
Sbjct: 584 SKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 195/385 (50%), Gaps = 10/385 (2%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGY---DSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +++ +CA S      R+IH +SI+ G    + DM     +  + +    +  A  +F  I
Sbjct: 44  ALLLSCASSKFKF--RQIHAFSIRHGVPLTNPDM-GKYLIFTLLSFCSPMSYAHQIFSQI 100

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG-MELKELG 216
           ++P+I +WN +I G    E+   AL+L++QM  S I P+  TY   LKA A  M+++E G
Sbjct: 101 QNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVRE-G 159

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
            ++H   I+   +S   V   LV MYA CG  + A  +F LM E+NL+ WN VI+G+  N
Sbjct: 160 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALN 219

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA +LF  M   GV  D  T+ ++L + A   A+ + ++ H   VK   + + +  
Sbjct: 220 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAG 279

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N+L+D Y KCG +  A K+F E     +V+ TS+I   A  G G+EAL+L+ E++ + + 
Sbjct: 280 NALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLM 339

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           P       +L AC++    ++G      +  ++G +        +V++  + G +  A  
Sbjct: 340 PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE 399

Query: 456 AFSEIP-DRGIVSWSAMIGGLAQHG 479
               +P     V W  ++G    HG
Sbjct: 400 FIQNMPMQPNAVVWRTLLGACTIHG 424



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 160/285 (56%), Gaps = 9/285 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA     D+  G +VH I +  GF+S  FV N+LV MYA CG+   + +LF+ + ER+
Sbjct: 146 LLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERN 205

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ + Y       EA+  F+EM L G+ P+ F++ S+++ACA  G   LGR+ H 
Sbjct: 206 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHV 265

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K+G D ++ + NAL+D+YAK G++  A  VF ++E   +VSW ++I G  ++     
Sbjct: 266 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKE 325

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG-L 238
           AL+LF++++   + P+  T+   L AC+   + + G   +   +K E    P I   G +
Sbjct: 326 ALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD-YFKRMKEEYGIVPKIEHYGCM 384

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIV-----ISGHLQNG 277
           VD+  + G + +A      MP + N + W  +     I GHL  G
Sbjct: 385 VDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALG 429



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 224/476 (47%), Gaps = 35/476 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGI---VVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +L +C S K  F  +    I   V  T  D  +++  +L+     C     + ++F  I 
Sbjct: 45  LLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSF---CSPMSYAHQIFSQIQ 101

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
             ++ +WN++   Y   +    A+  +++M +S I P+  +   ++ A A   D   G K
Sbjct: 102 NPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEK 161

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H  +I+ G++S +F  N LV MYA  G+ E A  +F+ +   ++V+WN+VI G  L+  
Sbjct: 162 VHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGR 221

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + AL LF++M    + P+ FT  S L ACA +    LGR+ H  ++K+ +  +   G  
Sbjct: 222 PNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNA 281

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+D+YAKCGS+ +A  +F  M EK++++W  +I G   NG   EA  LF  + R+G+   
Sbjct: 282 LLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPS 341

Query: 298 QTTLSTVLKSVA-------SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           + T   VL + +        F      K+ + +  K     + Y    ++D  G+ G V+
Sbjct: 342 EITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKI----EHY--GCMVDLLGRAGLVK 395

Query: 351 DAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
            A +  +    + +AV         T +    LGE A    L+++ +  +   +V  S  
Sbjct: 396 QAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPK--HSGDYVLLS-- 451

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTF---AGNSLVNMYAKCGSIDDADRAFSE 459
               NL A EQ +   VH ++   + +      G+SLV +  +       DR+  +
Sbjct: 452 ----NLYASEQ-RWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQ 502


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/683 (36%), Positives = 406/683 (59%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+C +   + LG  VH      G D D FV ++L+ MYA  G   D+R++FD + ER 
Sbjct: 152 VVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERD 211

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN +   YV    +  AV  F +M  SG  PN  +L+  ++  A   D   G ++H 
Sbjct: 212 CVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT 271

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G +S++  AN LV MYAK   L+D   +F  +   D+V+WN +I+GCV +   D 
Sbjct: 272 LAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQ 331

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF  M+ S I P+  T  S L A   +     G++LH  +++  +  D  +   LVD
Sbjct: 332 ALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVD 391

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++  A+ ++      +++  + +ISG++ NG   EA  +F ++  +G+  +   
Sbjct: 392 IYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVA 451

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + AS  A+ + +++H+ ++K A+E   Y+ ++L+D Y KCG ++ +  IF + S
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D V   SMI+++AQ G  EEAL L+ EM    +   +   SS+L+ACA+L A   GK+
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE 571

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK    +D FA ++L++MY KCG+++ A R F  +P++  VSW+++I     +G 
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE++ +   M E+G   +H+T ++++ AC HAG V E    F  M +++ I P  EH+A
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFA 691

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+  RAGK  +AMEL+  MPF+ +A +WGALL A R+++NVE+ + A++ LF ++P 
Sbjct: 692 CMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPH 751

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VL+SNI A AG WD V+KVRR MKD K++K PG SW++V +  + F   D+SH  
Sbjct: 752 NSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPD 811

Query: 661 SKEIYAKLDEVSDLLNKAGYVPM 683
           S++IY  L  +   L + GY+PM
Sbjct: 812 SEDIYMSLKSILLELREEGYIPM 834



 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 187/591 (31%), Positives = 308/591 (52%), Gaps = 8/591 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+ C S   L LGLQVHG  V  G   +D  +   LV MY     F D+  +F ++P  
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 60  SV---VSWNSLFSCYVHCDFLEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLL 114
           +    + WN L            A+ F+ +M    S   P+  +   ++ +CA  G   L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           GR +H  +  LG D DMF  +AL+ MYA  G L DA  VF  +   D V WN ++ G V 
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A++LF  M++S   PN  T    L   A       G QLH   +K  ++S+  V
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              LV MYAKC  +D+   +F LMP  +L+ WN +ISG +QNG   +A  LF  M + G+
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL ++L ++         K++H   V+     D ++V++L+D Y KC  V  A  
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           ++  S A+D+V  ++MI+ Y   G+ +EA+K++  + ++ I P++   +S+L ACA+++A
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            + G+++H + +K  +    +  ++L++MYAKCG +D +   FS+I  +  V+W++MI  
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISS 524

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            AQ+G  +EAL +F +M  +GV  +++T+ SVL AC     +   K     +  K  I+ 
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGK-EIHGVVIKGPIRA 583

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
                + +ID+ G+ G  + A  + ++MP + N   W +++ +   Y  V+
Sbjct: 584 DLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIASYGAYGLVK 633


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/698 (35%), Positives = 387/698 (55%), Gaps = 66/698 (9%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           M+AK G L DA  VF ++   D VSW  ++ G         A+K    M +    P  FT
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS------------ 247
            T+ L +CA  +   +GR++H  ++K+ + S   V   +++MY KCG             
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 248 -------------------MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
                              MD A  +F  MP++++++WN +I+G+ QNG D +A  LF  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 289 MYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
           M  E  +  D+ T+++VL + A+   + + KQVHA  ++T    +  + N+LI  Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 348 HVEDAVKIFKESSAVDL---------------------------------VACTSMITAY 374
            VE+A +I  +S   DL                                 VA T+MI  Y
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            Q G  +EA+ L+  M      P+S+  +++L+ CA+L+  + GKQ+H   I+      +
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
              N+++ MYA+ GS   A R F ++  R   ++W++MI  LAQHG+G+EA+ +F +ML 
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            GV P+ IT V VL AC+HAG V E K +++ ++ +  I P   HYACM+D+L RAG F 
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA E +  MP + +A  WG+LL A R++KN E+ + AAE L +I+P  S  +  ++N+Y+
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           + G W + A++ +  K+  ++KE G SW  ++ K++ F   D  H +   +YA    + +
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            +  AG+VP +++ LHDV++  KE+LL  HSEKLA+AFGLI+TP   T+RV KNLR+C D
Sbjct: 601 EIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCND 660

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CH + + ISK+  REIIVRD  RFHHFR+G CSC  YW
Sbjct: 661 CHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 239/508 (47%), Gaps = 68/508 (13%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           M+AK G   D+R +F  +PER  VSW  +           EA+    +M   G  P +F+
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI- 157
           L++++++CA +    +GRK+H + +KLG  S +  AN++++MY K G+ E A  VF+ + 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 158 ----------------------------EHPD--IVSWNAVIAGCVLHEHNDWALKLFQQ 187
                                         PD  IVSWNA+IAG   +  +  ALKLF +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 188 M-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           M   S + P+ FT TS L ACA +    +G+Q+H  +++ E+  +  V   L+  YAK G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 247 S---------------------------------MDEARMIFHLMPEKNLIAWNIVISGH 273
           S                                 M+ AR +F +M  ++++AW  +I G+
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            QNG + EA  LF  M   G   +  TL+ VL   AS   +   KQ+H  ++++  E   
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            + N++I  Y + G    A ++F +     + +  TSMI A AQ G GEEA+ L+ EM  
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSID 451
             + PD      +L+AC++     +GK+ +  I     ++   +  + +V++ A+ G   
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 452 DADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +A      +P +   ++W +++     H
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVH 508



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 233/531 (43%), Gaps = 100/531 (18%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN--------------- 45
           VL +C   +   +G +VH  VV  G  S   VANS++ MY KCG+               
Sbjct: 64  VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 123

Query: 46  ---------------FID-SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV- 88
                           +D +  LF+++P+RS+VSWN++ + Y       +A+  F  M+ 
Sbjct: 124 VSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 183

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYDS----------------- 129
            S + P+EF+++S+++ACA  G+  +G+++H Y ++  + Y+S                 
Sbjct: 184 ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVE 243

Query: 130 --------------DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                         ++ S  AL++ Y K+G++E A  +F  + + D+V+W A+I G   +
Sbjct: 244 NARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQN 303

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             ND A+ LF+ M +    PN +T  + L  CA +   + G+Q+HC  I+  ++    V 
Sbjct: 304 GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVS 363

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             ++ MYA+ GS   AR +F  +   K  I W  +I    Q+G   EA  LF  M R GV
Sbjct: 364 NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV 423

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T   VL + +           HA  V       D I N                 
Sbjct: 424 EPDRITYVGVLSACS-----------HAGFVNEGKRYYDQIKN----------------- 455

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
             +   A ++     M+   A+ GL  EA +    M    + PD+    SLL+AC     
Sbjct: 456 --EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKN 510

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            E  +     ++     +++ A +++ N+Y+ CG   DA R +    ++ +
Sbjct: 511 AELAELAAEKLLSID-PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 560


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/679 (38%), Positives = 403/679 (59%), Gaps = 36/679 (5%)

Query: 123 IKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           IK+G  +  ++ + L+D   +      L  A++VFK I+ P+ +SWN +I G  L     
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL L+  M S  ++PN +T+    K+CA  +  + G+Q+H  ++K  +  D  V   L+
Sbjct: 61  SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120

Query: 240 DMYAKCG-------------------------------SMDEARMIFHLMPEKNLIAWNI 268
            MYA+ G                               +MD+A+ +F  +P K++++WN 
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG+ + G   EA  LF  M +  V  D++T++TVL +      + + +Q+H+      
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F S+  +VN+LID Y KCG +E A  +F+     D+++  ++I  YA     +EAL ++ 
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQ 300

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNSLVNMYAK 446
           EM      P+     S+L ACA+L A + G+ +HV+I K   G +++T    SL++MYAK
Sbjct: 301 EMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAK 360

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG+I+ A++ F  I ++ + S +AMI G A HGR   A  +  +M +DG+ P+ IT V +
Sbjct: 361 CGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGL 420

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+HAGL    +  F+SM   + I+P  EHY CMID+LGR+G F+EA EL+++M  + 
Sbjct: 421 LSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEP 480

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
           +  +WG+LL A +I+KN+E+G+  A+ L  IEP+   ++VLLSNIYA++  WD+VA+VR 
Sbjct: 481 DGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRT 540

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
            + D  LKK PG S IE+   V+ F +GD+ H ++KEIY  L+E+  LL + G+V     
Sbjct: 541 LLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSE 600

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            L ++EE  KE  L +HSEKLA+AFGLI+T PG  +R+ KNLR+C +CH + + ISKI  
Sbjct: 601 VLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYK 660

Query: 747 REIIVRDVNRFHHFRNGSC 765
           REII RD +RFHHF++G C
Sbjct: 661 REIIARDRSRFHHFKDGMC 679



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 231/504 (45%), Gaps = 79/504 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           + K+C   K    G Q+H  ++  G   D  V  SL+ MYA+ G                
Sbjct: 84  LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143

Query: 45  ---------------NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                          N   ++++FD IP + VVSWN++ S Y      +EA+  F EM+ 
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             ++P+E +++++++ C  SG+  LGR+IH +    G+ S++   NAL+D+Y+K G +E 
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ +++ D++SWN +I G     H+  AL +FQ+M      PN  T  S L ACA 
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAH 323

Query: 210 MELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K    I ++  +   L+DMYAKCG+++ A  +F  +  K+L + N
Sbjct: 324 LGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCN 383

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSV 325
            +I G   +G    A  L   M ++G+  D  T   +L   S A    +G          
Sbjct: 384 AMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLG---------- 433

Query: 326 KTAFESD--DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           +  F+S   DY +   ++ YG                         MI    + GL +EA
Sbjct: 434 RKIFKSMTLDYRIEPKLEHYG------------------------CMIDLLGRSGLFKEA 469

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LV 441
            +L   M    + PD  +  SLL AC      E G+ +   ++K   +     G+   L 
Sbjct: 470 EELINSMT---MEPDGVIWGSLLKACKIHKNLELGELIAQKLMK---IEPKNPGSYVLLS 523

Query: 442 NMYAKCGSIDDADRAFSEIPDRGI 465
           N+YA     DD  R  + + D+G+
Sbjct: 524 NIYATSARWDDVARVRTLLNDKGL 547



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 187/403 (46%), Gaps = 33/403 (8%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F +I E + +SWN++   +        A+  +  M+  G+ PN ++   +  +CA S  
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS------- 164
           +  G++IH   +K G   D+    +L+ MYA+ G +EDA  VF    H D+VS       
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 165 ------------------------WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                                   WNA+I+G         AL+LF +M   ++ P+  T 
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + L  C      ELGRQ+H  +      S+  +   L+D+Y+KCG M+ A  +F  +  
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++I+WN +I G+       EA  +F  M + G   +  T+ ++L + A   AI + + +
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333

Query: 321 HALSVK--TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           H    K      ++  +  SLID Y KCG++E A ++F       L +C +MI  +A  G
Sbjct: 334 HVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             + A  L   M+   I PD      LL+AC++    + G+++
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/653 (37%), Positives = 388/653 (59%), Gaps = 6/653 (0%)

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           +G+  D+  +N L+ MY K G L  A  VF  +   ++VSW A++ G + + +   +L L
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F +M  S + PN FT+++ LKAC  +   ++GRQ+H   +K       +VG  ++DMY+K
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CG ++EA  +F +MP +NLI+WN +I+G+   G   +A  LF  M   G   D+ T ++ 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 305 LKSVASFQAIGVCKQVHALSVKTAF--ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           LK+ +   AI    Q+HA  +   F    +  +  +LID Y KCG +  A ++F      
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
            +++ T++I  YAQ G   E+++L+ ++++  I  D F+ SS++   A+ +  +QGKQ+H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
              IK     D    NS+++MY KCG I++A+R FSE+P R ++SW+ MI G  +HG GK
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EA+++F +M  D   P+ +T ++VL  C+H+GLV + + +F  +    GI+   EHYACM
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           +D+LGRAG+ +EA  LVD+MP +AN  +W  LL A R++ ++E+G+    +L  ++ E  
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
             +V++SNIYA AG W    ++R  +K  KLKKE G SW+E+  +V+ F  GD +H  ++
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTE 540

Query: 663 EIYAKLDEVSDLLNKA-GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA---TPP 718
           +I+  L E+   + +  GYV  V+  LHDVEE  K   L  HSEKLA+   L+       
Sbjct: 541 KIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEG 600

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              IRV KNLR+C DCH   + +SKI+    +VRD NRFH F +G CSC  YW
Sbjct: 601 RKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 248/459 (54%), Gaps = 4/459 (0%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           GF  D  ++N L+VMY KCG    +  +FD + +R+VVSW +L   ++      E++  F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
            +M LSG++PN+F+ S+ + AC       +GR+IH   +K G+D      N+++DMY+K 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G + +A  +F+ +   +++SWNA+IAG  +    + AL LFQ+M+      + FT+TS L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 205 KACAGMELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           KAC+ +   + G Q+H  LI        +  V   L+D+Y KCG +  AR +F  + EK+
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           +I+W  +I G+ Q G   E+  LF  +    +  D   LS+++   A F  +   KQ+HA
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
            ++K     D  + NS++D Y KCG + +A ++F E  A ++++ T MIT Y + GLG+E
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAGNSLV 441
           A++L+ EMQ     PD     ++L  C++    E+G++    +  + G  +       +V
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421

Query: 442 NMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
           ++  + G + +A      +P +  +  W  ++     HG
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC     L +G Q+H I V TGFD    V NS++ MY+KCG   ++  +F+ +P R++
Sbjct: 80  LKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNL 139

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +SWN++ + Y    F E+A+  F++M   G   +EF+ +S + AC+  G    G +IH +
Sbjct: 140 ISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAF 199

Query: 122 SIKLG--YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            I  G  Y  +   A AL+D+Y K G L  A  VF  IE   ++SW A+I G     +  
Sbjct: 200 LITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLA 259

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            +++LF+Q++ S I  + F  +S +   A   L + G+Q+H   IK+    D  V   ++
Sbjct: 260 ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSIL 319

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KCG ++EA  +F  MP +N+I+W ++I+G+ ++G   EA  LF  M  +    D  
Sbjct: 320 DMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDV 379

Query: 300 TLSTVL 305
           T   VL
Sbjct: 380 TYLAVL 385



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 8/167 (4%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G Q+H   +      D  V NS++ MY KCG   ++ RLF  +P R+V+SW  + + Y  
Sbjct: 296 GKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGK 355

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL----GYDS 129
               +EA+  F EM L    P++ +  +++  C+ SG   L  K   Y  +L    G  +
Sbjct: 356 HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSG---LVEKGQEYFSRLCSYHGIKA 412

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
            +     +VD+  + G L++A  +   +    ++  W  +++ C +H
Sbjct: 413 RVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVH 459


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/692 (38%), Positives = 400/692 (57%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK+G  +  ++ + L++   +      L  A++VFK I+ P+++ WN +  G 
Sbjct: 50  RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      ALKL+  M S  + PN +T+   LK+CA  +  + G+Q+H  ++K+    D 
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
            V   L+ MY + G +++A  +F                                 +P K
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN +ISG+ + G   EA  LF  M +  V  D++T+ TV+ + A   +I + +QVH
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
                  F S+  IVN+LID Y KCG +E A  +F+     D+++  ++I  Y    L +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
           EAL L+ EM      P+     S+L ACA+L A + G+ +HV+I K   G  + +    S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG I+ A + F+ I  + + SW+AMI G A HGR   +  +F +M + G+ P+
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V +L AC+H+G++   +H F +M + + + P  EHY CMID+LG +G F+EA E++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           + M  + +  +W +LL A +++ NVE+G+  AE L  IEPE   ++VLLSNIYASAG W+
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            VAK R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL KAG
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + +
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 710 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 261/581 (44%), Gaps = 86/581 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDS----------- 49
           VLK+C   K    G Q+HG V+  G D D +V  SL+ MY + G   D+           
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199

Query: 50  --------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                               ++LFD IP + VVSWN++ S Y      +EA+  FK+M+ 
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + +RP+E ++ ++++ACA SG   LGR++H +    G+ S++   NAL+D+Y+K G LE 
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S   PN  T  S L ACA 
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K    + +   +   L+DMYAKCG ++ A  +F+ +  K+L +WN
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    +  LF  M + G+  D  T   +L + +    + + + +     +T
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI----FRT 495

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
              + DY +   ++ YG                 +DL+  + +     +           
Sbjct: 496 M--TQDYKMTPKLEHYG---------------CMIDLLGHSGLFKEAEE----------- 527

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK--------FGFMSDTFAGNS 439
             +   E+ PD  +  SLL AC      E G+    ++IK        +  +S+ +A   
Sbjct: 528 -MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM----IGGLAQHGRGKEALQMFGQM---L 492
             N  AK  ++ + D+   ++P    +   ++    I G   H R +E   M  +M   L
Sbjct: 587 RWNEVAKTRALLN-DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645

Query: 493 ED-GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           E  G +P+      VL            +HH E +   FG+
Sbjct: 646 EKAGFVPD---TSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 192/403 (47%), Gaps = 33/403 (8%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F  I E +++ WN++F  +        A+  +  M+  G+ PN ++   ++ +CA S  
Sbjct: 90  VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------ 159
              G++IHG+ +KLG D D++   +L+ MY + G LEDA  VF    H            
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209

Query: 160 -------------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                               D+VSWNA+I+G     +   AL+LF+ M  + + P+  T 
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + + ACA     ELGRQ+H  +      S+  +   L+D+Y+KCG ++ A  +F  +P 
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++I+WN +I G+       EA  LF  M R G   +  T+ ++L + A   AI + + +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 321 HALSVK--TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           H    K      +   +  SLID Y KCG +E A ++F       L +  +MI  +A  G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             + +  L+  M+   I PD      LL+AC++    + G+ +
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/710 (37%), Positives = 400/710 (56%), Gaps = 74/710 (10%)

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KS 190
           A +LV   A  G L DA A F  +     D V  NA+++          A+ +F  +  S
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 191 SEINPNMFTYTSALKACAGME--LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
             + P+ +++T+ + A   M         QLHCS++K    +   V   L+ +Y KC + 
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 249 D---EARMIFHLMPEKNL-------------------------------IAWNIVISGHL 274
           +   +AR +   MP+K+                                + WN +ISG++
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA--LSVKTAF--E 330
           Q+G   +A  LF  M  E V  D+ T ++VL + A+       K VH   + ++  F  E
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS--------------------- 369
           +   + N+L+  Y K G +  A +IF   +  D+V+  +                     
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 370 ----------MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                     M++ Y   GL E+ALKL+ +M+  ++ P  +  +  + AC  L A + G+
Sbjct: 395 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 454

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H H+++ GF +   AGN+L+ MYAKCG+++DA   F  +P+   VSW+AMI  L QHG
Sbjct: 455 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 514

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+EAL++F QM+ +G+ P+ I+ +++L ACNHAGLV E  H+FESM++ FGI P ++HY
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           A +ID+LGR+G+  EA +L+ TMPF+   S+W A+L   R   ++E G +AA+ LF + P
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +   T++LLSN Y++AG W + A+VR+ M+D  +KKEPG SWIEV  K++ F VGD  H 
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            ++E+Y  L+ +   + K GYVP  +  LHD+E  EKE +L+ HSEKLAV FGL+  PPG
Sbjct: 695 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 754

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AT+ V KNLRIC DCHT+  F+SK V REI+VRDV RFHHF++G CSC G
Sbjct: 755 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCEG 804



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 42/370 (11%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D+    ++VV Y + G+   +R +F+ +  +  V WN++ S YV      +A   F+ 
Sbjct: 229 DKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRR 288

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY----DSDMFSANALVDMYA 142
           MV   +  +EF+ +S+++ACA +G  + G+ +HG  I+L      ++ +   NALV +Y+
Sbjct: 289 MVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYS 348

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAG-----C---------VLHEHND--W------ 180
           K G +  A  +F  +   D+VSWN +++G     C         V+   ND  W      
Sbjct: 349 KGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSG 408

Query: 181 ---------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    ALKLF QM++ ++ P  +TY  A+ AC  +   + GRQLH  L++   ++ 
Sbjct: 409 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 468

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
              G  L+ MYAKCG++++AR++F +MP  + ++WN +IS   Q+G   EA  LF  M  
Sbjct: 469 NSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 528

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAF---ESDDYIVNSLIDAYGKCG 347
           EG+  D+ +  T+L   A   A  V +  H   S+K  F     +D+    LID  G+ G
Sbjct: 529 EGIDPDRISFLTIL--TACNHAGLVDEGFHYFESMKRDFGISPGEDHYAR-LIDLLGRSG 585

Query: 348 HVEDAVKIFK 357
            + +A  + K
Sbjct: 586 RIGEARDLIK 595



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 232/524 (44%), Gaps = 78/524 (14%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           A SLV   A  G   D+   FDA+P   R  V  N++ S +        AV  F  ++ S
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 91  G-IRPNEFSLSSMINACAGSGDSLLG---RKIHGYSIKLGYDSDMFSANALVDMYAKV-- 144
           G +RP+++S +++I+A  G   +L      ++H   +K G  + +  +NAL+ +Y K   
Sbjct: 155 GSLRPDDYSFTALISAV-GQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 213

Query: 145 --------------------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
                                           G++  A +VF++++    V WNA+I+G 
Sbjct: 214 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 273

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           V       A +LF++M S ++  + FT+TS L ACA       G+ +H  +I+++    P
Sbjct: 274 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 333

Query: 233 ----IVGVGLVDMYAK-------------------------------CGSMDEARMIFHL 257
                V   LV +Y+K                                G +D+A  +F +
Sbjct: 334 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 393

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP KN ++W +++SG++  G   +A  LF  M  E V     T +  + +     A+   
Sbjct: 394 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 453

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           +Q+HA  V+  FE+ +   N+L+  Y KCG V DA  +F     +D V+  +MI+A  Q 
Sbjct: 454 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 513

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFA 436
           G G EAL+L+ +M    I+PD     ++L AC +    ++G      + + FG       
Sbjct: 514 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 573

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
              L+++  + G I +A      +P     S W A++ G   +G
Sbjct: 574 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 48/323 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVF--TGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VL AC +      G  VHG ++     F  ++   V N+LV +Y+K G  + ++R+FD +
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363

Query: 57  PERSVVSWNSLFS------C-------------------------YVHCDFLEEAVCFFK 85
             + VVSWN++ S      C                         YVH    E+A+  F 
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M    ++P +++ +  I AC   G    GR++H + ++ G+++   + NAL+ MYAK G
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            + DA  VF  + + D VSWNA+I+    H H   AL+LF QM +  I+P+  ++ + L 
Sbjct: 484 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 543

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVG------LVDMYAKCGSMDEARMIFHLMP 259
           AC    L + G     S+     K D  +  G      L+D+  + G + EAR +   MP
Sbjct: 544 ACNHAGLVDEGFHYFESM-----KRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP 598

Query: 260 -EKNLIAWNIVISGHLQNGGDME 281
            E     W  ++SG   N GDME
Sbjct: 599 FEPTPSIWEAILSGCRTN-GDME 620


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/692 (38%), Positives = 391/692 (56%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++ HG+ I+ G  SD +SA+ L  M A     +LE A  VF +I  P+  +WN +I    
Sbjct: 47  KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106

Query: 174 LHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                  ++  F  M S S+  PN +T+   +KA A +    LG+ LH   +K  + SD 
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+  Y  CG +D A  +F  + EK++++WN +I+G +Q G   +A  LF  M  E
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V     T+  VL + A  + +   +QV +   +     +  + N+++D Y KCG +EDA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286

Query: 353 VKIF---KESSAV----------------------------DLVACTSMITAYAQFGLGE 381
            ++F   +E   V                            D+VA  ++I+AY Q G   
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346

Query: 382 EALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           EAL ++ E+Q  + +  +     S L+ACA + A E G+ +H +I K G   +    ++L
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++MY+KCG ++ +   F+ +  R +  WSAMIGGLA HG G EA+ MF +M E  V PN 
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T  +V CAC+H GLV EA+  F  ME  +GI P ++HYAC++D+LGR+G  ++A++ ++
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            MP   + SVWGALLGA +I+ N+ + + A   L  +EP     HVLLSNIYA  G W+N
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V+++R+ M+   LKKEPG S IE+   ++ F  GD +H  S+++Y KL EV + L   GY
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646

Query: 681 VPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
            P +   L  +EE E KEQ L  HSEKLA+ +GLI+T     IRV KNLR+C DCH+  +
Sbjct: 647 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 706

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IS++  REIIVRD  RFHHFRNG CSC  +W
Sbjct: 707 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 273/566 (48%), Gaps = 50/566 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           +++ C S + L    Q HG ++ TG  SD + A+ L  M A     +   +R++FD IP+
Sbjct: 36  LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRK 117
            +  +WN+L   Y        ++  F +MV  S   PN+++   +I A A      LG+ 
Sbjct: 93  PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HG ++K    SD+F AN+L+  Y   G+L+ A  VF  I+  D+VSWN++I G V    
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGV 236
            D AL+LF++M+S ++  +  T    L ACA +   E GRQ+ CS I+   +  +  +  
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV-CSYIEENRVNVNLTLAN 271

Query: 237 GLVDMYAKCGSMDEARMIF-------------------------------HLMPEKNLIA 265
            ++DMY KCGS+++A+ +F                               + MP+K+++A
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331

Query: 266 WNIVISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           WN +IS + QNG   EA  +F     ++ +  +Q TL + L + A   A+ + + +H+  
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
            K     + ++ ++LI  Y KCG +E + ++F      D+   ++MI   A  G G EA+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIKFGFMSDTFAGNSLVNM 443
            ++ +MQ+  + P+    +++  AC++    ++ + + H     +G + +      +V++
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511

Query: 444 YAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE-----DGVL 497
             + G ++ A +    +P     S W A++G    H     A     ++LE     DG  
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA- 570

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHF 523
             H+ L ++         V+E + H 
Sbjct: 571 --HVLLSNIYAKLGKWENVSELRKHM 594


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/689 (37%), Positives = 410/689 (59%), Gaps = 22/689 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C+  +D  LG+Q+HGIVV  G D+D   A++L+ MYAK   F++S R+F  IPE++
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++ +  V  + L  A+ FFKEM       ++   +S++ +CA   +  LG ++H 
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + +D     A +DMYAK  N++DA  +F + E+ +  S+NA+I G    EH   
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF ++ SS +  +  + +   +ACA ++    G Q++   IK  +  D  V    +D
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++ EA  +F  M  ++ ++WN +I+ H QNG   E   LF  M R  +  D+ T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI---FK 357
             ++LK+     ++G   ++H+  VK+   S+  +  SLID Y KCG +E+A KI   F 
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544

Query: 358 ESSAVD-----------------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + + V                   V+  S+I+ Y      E+A  L+  M +  I PD F
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +++L+ CANL++   GKQ+H  +IK    SD +  ++LV+MY+KCG + D+   F + 
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R  V+W+AMI G A HG+G+EA+Q+F +M+ + + PNH+T +S+L AC H GL+ +  
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            +F  M++ +G+ P   HY+ M+DILG++GK + A+EL+  MPF+A+  +W  LLG   I
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 784

Query: 581 YK-NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           ++ NVEV + A   L  ++P+ SS + LLSN+YA AGMW+ V+ +RR M+  KLKKEPG 
Sbjct: 785 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 844

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SW+E+KD+++ F VGD++H R +EIY +L
Sbjct: 845 SWVELKDELHVFLVGDKAHPRWEEIYEEL 873



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 187/628 (29%), Positives = 314/628 (50%), Gaps = 58/628 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V K C  +  L LG Q H  ++ +GF    FV N L+ +Y    +F+ +  +FD +P R 
Sbjct: 54  VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPNEFSLSSM-------- 102
           VVSWN + + Y   + + +A  FF  M          +LSG   N  SL S+        
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173

Query: 103 -------------INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
                        +  C+   D+ LG +IHG  +++G D+D+ +A+AL+DMYAK     +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           ++ VF+ I   + VSW+A+IAGCV +     ALK F++M+      +   Y S L++CA 
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +    LG QLH   +K +  +D IV    +DMYAKC +M +A+++F      N  ++N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+G+ Q     +A  LF  +   G+GFD+ +LS V ++ A  + +    Q++ L++K++ 
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D  + N+ ID YGKC  + +A ++F E    D V+  ++I A+ Q G G E L L++ 
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    I PD F   S+L AC    +   G ++H  I+K G  S++  G SL++MY+KCG 
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532

Query: 450 IDDADRAFSEIPDRG--------------------IVSWSAMIGGLAQHGRGKEALQMFG 489
           I++A++  S    R                      VSW+++I G     + ++A  +F 
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILG 547
           +M+E G+ P+  T  +VL  C +       K     + KK   +   + Y C  ++D+  
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYS 649

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALL 575
           + G   ++  L+     + +   W A++
Sbjct: 650 KCGDLHDS-RLMFEKSLRRDFVTWNAMI 676



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 254/546 (46%), Gaps = 42/546 (7%)

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDSLLGR 116
           RSVVS+N   +  +    +  +  +F + +  ++ +    FS   +   CA  G   LG+
Sbjct: 12  RSVVSFNRCLTEKISYRRVP-SFSYFTDFLNQVNSVSTTNFSF--VFKECAKQGALELGK 68

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           + H + I  G+    F  N L+ +Y    +   A  VF  +   D+VSWN +I G    +
Sbjct: 69  QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING--YSK 126

Query: 177 HND------------------W---------------ALKLFQQMKSSEINPNMFTYTSA 203
            ND                  W               ++++F  M    I  +  T+   
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           LK C+ +E   LG Q+H  ++++   +D +    L+DMYAK     E+  +F  +PEKN 
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++W+ +I+G +QN     A   F  M +   G  Q+  ++VL+S A+   + +  Q+HA 
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           ++K+ F +D  +  + +D Y KC +++DA  +F  S  ++  +  +MIT Y+Q   G +A
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+  +    +  D    S +  ACA +    +G Q++   IK     D    N+ ++M
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDM 426

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y KC ++ +A R F E+  R  VSW+A+I    Q+G+G E L +F  ML   + P+  T 
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
            S+L AC    L    + H  S   K G+         +ID+  + G  +EA ++     
Sbjct: 487 GSILKACTGGSLGYGMEIH--SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544

Query: 564 FQANAS 569
            +AN S
Sbjct: 545 QRANVS 550



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 195/415 (46%), Gaps = 43/415 (10%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLI--------------------------------KM 226
            ++   K CA     ELG+Q H  +I                                KM
Sbjct: 50  NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            ++ D +    +++ Y+K   M +A   F++MP +++++WN ++SG+LQNG  +++  +F
Sbjct: 110 PLR-DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M REG+ FD  T + +LK  +  +   +  Q+H + V+   ++D    ++L+D Y K 
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
               +++++F+     + V+ +++I    Q  L   ALK + EMQ         + +S+L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            +CA LS    G Q+H H +K  F +D     + ++MYAKC ++ DA   F    +    
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           S++AMI G +Q   G +AL +F +++  G+  + I+L  V  AC     ++E    +   
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY--- 405

Query: 527 EKKFGIQPMQEHYACM----IDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                I+       C+    ID+ G+     EA  + D M  + +A  W A++ A
Sbjct: 406 --GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 137/353 (38%), Gaps = 60/353 (16%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF--------------------------- 435
           S +   CA   A E GKQ H H+I  GF   TF                           
Sbjct: 52  SFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPL 111

Query: 436 ----AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
               + N ++N Y+K   +  A+  F+ +P R +VSW++M+ G  Q+G   +++++F  M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
             +G+  +  T   +L  C+     +        +  + G        + ++D+  +  +
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGM-QIHGIVVRVGCDTDVVAASALLDMYAKGKR 230

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
           F E++ +   +P + N+  W A++        V+    +  + F  E +K +  V  S I
Sbjct: 231 FVESLRVFQGIP-EKNSVSWSAIIAGC-----VQNNLLSLALKFFKEMQKVNAGVSQS-I 283

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV 671
           YAS  +  + A +       +L      S       V T T+         ++YAK D +
Sbjct: 284 YAS--VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL---------DMYAKCDNM 332

Query: 672 SDL---------LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
            D          LN+  Y  M+ T     E   K  LL+H      + F  I+
Sbjct: 333 QDAQILFDNSENLNRQSYNAMI-TGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/653 (41%), Positives = 387/653 (59%), Gaps = 13/653 (1%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           D ++FS NA++  YAK      A  +F  I  PD+VS+N +I+          AL LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+   ++ + FT ++ + AC   ++  +G QLH   +     S   V   L+  Y K G 
Sbjct: 131 MREMGLDMDXFTLSAVITACCD-DVGLIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 248 MDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           +D+A+ +F+ M   ++ ++WN +I  + Q+    +A  LF  M R G+  D  TL++VL 
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVDLV 365
           +    + +    Q H   +KT F  + ++ + LID Y KCG  + D  K+F+E +  DLV
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 366 ACTSMITAYAQFG-LGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQVH 422
              +M++ Y+Q     E+AL+ + +MQ     P+  SFVC  +++AC+NLS+  QGKQ+H
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVC--VISACSNLSSPSQGKQIH 366

Query: 423 VHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
              +K    S+  +  N+L+ MY+KCG++ DA R F  + +   VS ++MI G AQHG  
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            E+L +F  MLE  + P  IT +SVL AC H G V E  ++F  M++KF I+P  EHY+C
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+LGRAGK  EA  L+  MPF   +  W +LLGA R + N+E+   AA  +  +EP  
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           ++ +V+LSN+YASAG W+ VA VR+FM+D  +KK+PG SWIEVK +++ F   D SH   
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDL---HDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
           KEIY  L+E+S  + +AGYVP V   L         EKE  L HHSEKLAVAFGLI+T  
Sbjct: 607 KEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKD 666

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  + V KNLRIC DCH + +FIS I  REI VRD +RFH F+ G CSCG YW
Sbjct: 667 GEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 274/531 (51%), Gaps = 41/531 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK C +++DL  G  +H + + +      + +N  +++Y+KCG    +R+         
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 LFD IPE  +VS+N+L S Y  C     A+  F  M  
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+  + F+LS++I AC    D  L  ++H  ++  G+DS +   NAL+  Y K G+L+D
Sbjct: 134 MGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 150 AVAVFKDIEH-PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           A  VF  +    D VSWN++I     H+    AL LFQ+M    +N +MFT  S L A  
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWN 267
            +E    G Q H  LIK     +  VG GL+D+Y+KC G M + R +F  + E +L+ WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVHALSV 325
            ++SG+ QN   +E A L  +   +G+G+  +  +   V+ + ++  +    KQ+H+L++
Sbjct: 312 TMVSGYSQNEEFLEDA-LECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 326 KTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           K+   S+   V N+LI  Y KCG+++DA ++F   +  + V+  SMI  YAQ G+  E+L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNM 443
            L+  M +R+I P S    S+L+ACA+    E+G    ++   KF    +    + ++++
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 444 YAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             + G + +A+   + +P + G + W++++G    HG  + A++   Q+L+
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 199/438 (45%), Gaps = 47/438 (10%)

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           ++I+  +  +   LK C        G+ LH   IK  I          + +Y+KCG +  
Sbjct: 2   NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61

Query: 251 AR-------------------------------MIFHLMPEKNLIAWNIVISGHLQNGGD 279
           AR                                +F  +PE +L+++N +IS +   G  
Sbjct: 62  ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
             A  LF  M   G+  D  TLS V+   A    +G+  Q+H+++V + F+S   + N+L
Sbjct: 122 APALGLFSGMREMGLDMDXFTLSAVI--TACCDDVGLIGQLHSVAVSSGFDSYVSVNNAL 179

Query: 340 IDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           +  YGK G ++DA ++F     + D V+  SMI AY Q   G +AL L+ EM  R +N D
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-GSIDDADRAF 457
            F  +S+L A   L     G Q H  +IK GF  ++  G+ L+++Y+KC G + D  + F
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVF 299

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKE-ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
            EI +  +V W+ M+ G +Q+    E AL+ F QM   G  PN  + V V+ AC++    
Sbjct: 300 EEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359

Query: 517 AEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           ++ K  H  +++       +    A +I +  + G  Q+A  L D M      S+   + 
Sbjct: 360 SQGKQIHSLALKSDIPSNRISVDNA-LIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIA 418

Query: 576 GAARIYKNVEVGQHAAEM 593
           G A         QH  EM
Sbjct: 419 GYA---------QHGIEM 427



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 4/213 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V+ AC++      G Q+H + + +   S+   V N+L+ MY+KCGN  D+RRLFD + E 
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKI 118
           + VS NS+ + Y       E++  F+ M+   I P   +  S+++ACA +G    G    
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYF 468

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           +    K   + +    + ++D+  + G L +A  +   +  +P  + W +++  C  H +
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528

Query: 178 NDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
            + A+K   Q+   E  N   +   S + A AG
Sbjct: 529 IELAVKAANQVLQLEPSNAAPYVVLSNMYASAG 561


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/657 (37%), Positives = 391/657 (59%), Gaps = 1/657 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++IH   I  G   + F +N+L++ Y   G L DA  +F      ++VSW  +I+G   +
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +    A+ +F++M      PN  T +S L A A + L  + + +HC  ++   + +  V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LVDMY+K G M  AR +F  M E+N+++WN ++SG+  +G   EA  LF  M R+G+ 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  T+ +++ +  S   + V   +H   ++T +E+D +I  +L+D Y     V+DA ++
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSA 414
           F E    D+ A T M+T ++     + A+K + +M   + +  DS V   +L++C++  A
Sbjct: 281 FSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGA 340

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            +QG++VH   IK  F ++ F G+++++MYA CG+++DA R F  + ++ +V W+AMI G
Sbjct: 341 LQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAG 400

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              +G G +A+ +F QM   G+ P+  T VSVL AC+HAG+V E    F  M K     P
Sbjct: 401 NGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIP 460

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             +HYAC+IDILGRAG+   A   ++ MPFQ +  V+  LLGA RI+ N+++G   ++ +
Sbjct: 461 NLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKI 520

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F +EP  +  +VLLSN+YA AG W+ V   R  ++  +LKK+PG S IE+  ++YTF  G
Sbjct: 521 FEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAG 580

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           ++ H +  +I   L  +   + KAGYVP     L DV +  K+ +LYHHSEK+A+AFGL+
Sbjct: 581 EKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLM 640

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T PG  IR+ KNLR C DCH++ +F+SK+  R ++++D NRFH F++G CSC  YW
Sbjct: 641 RTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 253/488 (51%), Gaps = 3/488 (0%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           KDL    Q+H  ++ +G   + F++NSL+  Y  CG   D++++F   P ++VVSW  L 
Sbjct: 35  KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILI 94

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S     D   EA+  F+EM +   +PN  ++SS++ A A  G   + + +H + ++ G++
Sbjct: 95  SGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE 154

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            ++F   ALVDMY+K G +  A  +F+ +   ++VSWNA+++G   H  ++ A+ LF  M
Sbjct: 155 GNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +   +  + +T  S + A   +   ++G  +H  +I+   ++D  +   L+D+Y     +
Sbjct: 215 RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKS 307
           D+A  +F  M  K++ AW ++++G         A   F  M   + +  D   L  +L S
Sbjct: 275 DDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSS 334

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            +   A+   ++VHAL++KT F ++ ++ +++ID Y  CG++EDA + F      D+V  
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCW 394

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            +MI      G G +A+ L+L+M+   ++PD     S+L AC++     +G Q+  H++K
Sbjct: 395 NAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK 454

Query: 428 FGF-MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEAL 485
               + +      ++++  + G +D A    + +P       +S ++G    HG  K   
Sbjct: 455 TSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGH 514

Query: 486 QMFGQMLE 493
           ++  ++ E
Sbjct: 515 EISQKIFE 522



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 201/400 (50%), Gaps = 6/400 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A  +   + +   VH   V  GF+ + FV  +LV MY+K G    +R+LF+++ ER+
Sbjct: 128 VLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERN 187

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN++ S Y    F EEA+  F  M   G+  + +++ S+I A    G   +G  IHG
Sbjct: 188 VVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHG 247

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ GY++D     AL+D+Y     ++DA  VF ++   D+ +W  ++ G     H D 
Sbjct: 248 FIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDR 307

Query: 181 ALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A+K F +M     +  +       L +C+     + GR++H   IK    ++  VG  ++
Sbjct: 308 AIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVI 367

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYA CG++++A+  F+ M EK+++ WN +I+G+  NG   +A  LF  M   G+  D++
Sbjct: 368 DMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI-VNSLIDAYGKCGHVEDAVKIFKE 358
           T  +VL + +    +    Q+    VKT+ +  +      +ID  G+ G ++ A      
Sbjct: 428 TFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINN 487

Query: 359 SS-AVDLVACTSMITA---YAQFGLGEEALKLYLEMQDRE 394
                D    ++++ A   +    LG E  +   EM+  +
Sbjct: 488 MPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPND 527


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/659 (39%), Positives = 362/659 (54%), Gaps = 75/659 (11%)

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           L+  ++     P+     SALK+C     + L R LH + +   +  DP V   L+  Y 
Sbjct: 7   LYHFLRHVSFPPDPHLLPSALKSCPA---QPLARALHAAAVVSGLAEDPFVASSLLHSYI 63

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA--------------SLFPW- 288
           + G+   AR +F  MPEKN++ W+ +I+G+   G D EAA              ++  W 
Sbjct: 64  RLGATGAARSVFDRMPEKNVVGWSALIAGYSARG-DAEAAWGLLEQMRSAGVEPNVITWN 122

Query: 289 ---------------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
                                M+ EG   D T +S  L +V   + + V KQVH   VK 
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC-------------------- 367
               D  +V +LID YGKCG  ++ V++F ESS +D+ +C                    
Sbjct: 183 GCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242

Query: 368 ---------------TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
                          TS++    Q G   EA+ L+  MQ   + P+S     +L A AN+
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANV 302

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +A   G+  H   ++ GF+ D + G++LV+MYAKCG    A   F  +P R +VSW+AMI
Sbjct: 303 AALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMI 362

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
           GG A HG    A+Q+F  M +    P+ +T   VL AC+ AGL  E + +F  M++  GI
Sbjct: 363 GGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGI 422

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P  EHYACM+ +LGR+GK  EA +L++ MPF+ ++ +WG+LLG+ R+Y NV + + AAE
Sbjct: 423 SPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAE 482

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            LF +EP  +  +VLLSNIYAS  MWD V +VR  MK+  LKKE G SWIE+K+KV+   
Sbjct: 483 KLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLL 542

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD SH     I  KL++++  +N+ G+ P  +  LHDVEE EK+ +L  HSEKLAVA G
Sbjct: 543 AGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALG 602

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI+T PG  +RV KNLRIC DCH + +FIS    REI VRD NRFHHF++G CSCG YW
Sbjct: 603 LISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 217/543 (39%), Gaps = 125/543 (23%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK+C ++    L   +H   V +G   D FVA+SL+  Y + G    +R +FD +PE++V
Sbjct: 27  LKSCPAQP---LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNV 83

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-------- 113
           V W++L + Y      E A    ++M  +G+ PN  + + +++    SG +L        
Sbjct: 84  VGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVR 143

Query: 114 ---------------------------LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
                                      +G+++HGY +K G   D     AL+DMY K G 
Sbjct: 144 MHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGR 203

Query: 147 LEDAVAVFKDIEHPDI-----------------------------------VSWNAVIAG 171
            ++ V VF +  H D+                                   VSW +++A 
Sbjct: 204 ADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVAC 263

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
           CV +  +  A+ LF+ M+S  + PN  T    L A A +     GR  HC  ++     D
Sbjct: 264 CVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHD 323

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             VG  LVDMYAKCG    AR IF  MP +N+++WN +I G+  +G    A  LF  M +
Sbjct: 324 VYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQK 383

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
                D  T + VL         G C Q                           G  E+
Sbjct: 384 CKQKPDLVTFTCVL---------GACSQA--------------------------GLTEE 408

Query: 352 AVKIFKE-------SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
             + F E       S  ++  AC  M+T   + G  +EA  L  EM      PDS +  S
Sbjct: 409 GRRYFNEMQQGHGISPRMEHYAC--MVTLLGRSGKLDEAYDLINEM---PFEPDSCIWGS 463

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPD 462
           LL +C     Y       V   K   +    AGN   L N+YA     D  +R   E+ +
Sbjct: 464 LLGSC---RVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKN 520

Query: 463 RGI 465
            G+
Sbjct: 521 MGL 523



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A  +   L  G   H   +  GF  D +V ++LV MYAKCG    +R +FDA+P R+
Sbjct: 295 VLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN 354

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           VVSWN++   Y        AV  F  M     +P+  + + ++ AC+ +G +  GR+   
Sbjct: 355 VVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFN 414

Query: 119 -----HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
                HG S ++ + + M      V +  + G L++A  +  ++   PD   W +++  C
Sbjct: 415 EMQQGHGISPRMEHYACM------VTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSC 468

Query: 173 VLH 175
            ++
Sbjct: 469 RVY 471


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/644 (39%), Positives = 395/644 (61%), Gaps = 22/644 (3%)

Query: 138 VDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           VD+  +   +++AV +    +H P    ++ +IA CV H   +   ++    K+S   P 
Sbjct: 62  VDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPG 121

Query: 197 MFTYTSALK---AC-----AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +F     L     C     A M   E+G +  CS   M      IVG      YAK G +
Sbjct: 122 VFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTM------IVG------YAKLGRL 169

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKS 307
           ++AR +F  MP+++  +WN  ISG++ +    EA  LF  M R E    ++ TLS+ L +
Sbjct: 170 EQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAA 229

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            A+   + + K++H   ++T    D+ + ++L+D YGKCG +++A  IF +    D+V+ 
Sbjct: 230 SAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSW 289

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T+MI    + G  EE   L+ ++    + P+ +  + +LNACA+ +A   GK+VH +++ 
Sbjct: 290 TTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMH 349

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G+   +FA ++LV+MY+KCG+   A R F+E+    +VSW+++I G AQ+G+  EAL  
Sbjct: 350 AGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHF 409

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F  +L+ G  P+ +T V VL AC HAGLV +   +F S+++K G+    +HYAC+ID+L 
Sbjct: 410 FELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 469

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           R+G+F+EA  ++D MP + +  +W +LLG  RI+ N+E+ + AA+ L+ IEPE  +T++ 
Sbjct: 470 RSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYIT 529

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           L+NIYA+AG+W  VA VR+ M +  + K+PG SWIE+K +V+ F VGD SH ++ +I+  
Sbjct: 530 LANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEF 589

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L E+S  + + GYVP     LHDVEE +KEQ L +HSEKLAV FG+I+TPPG  I+V KN
Sbjct: 590 LGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKN 649

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR CVDCHT+ ++ISKIV R+I VRD NRFH F +GSCSC  YW
Sbjct: 650 LRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 231/464 (49%), Gaps = 43/464 (9%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           RP+    S++I AC       LGR++H ++    +   +F +N L+DMYAK G+L DA  
Sbjct: 84  RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQM 143

Query: 153 VFKDIEHPDI-------------------------------VSWNAVIAGCVLHEHNDWA 181
           +F ++ H D+                                SWNA I+G V H     A
Sbjct: 144 LFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREA 203

Query: 182 LKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           L+LF+ M+  E  + N FT +SAL A A +    LG+++H  LI+ E+  D +V   L+D
Sbjct: 204 LELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLD 263

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KCGS+DEAR IF  M ++++++W  +I    ++G   E   LF  + + GV  ++ T
Sbjct: 264 LYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYT 323

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            + VL + A   A  + K+VH   +   ++   + +++L+  Y KCG+   A ++F E  
Sbjct: 324 FAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMH 383

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV+ TS+I  YAQ G  +EAL  +  +      PD      +L+AC +    ++G +
Sbjct: 384 QPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLE 443

Query: 421 VHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGL 475
            + H I  K G M        ++++ A+ G   +A+     +   PD+ +  W++++GG 
Sbjct: 444 -YFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFL--WASLLGGC 500

Query: 476 AQHGRGKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAE 518
             HG  + A +    + E  + P N  T +++     +AGL +E
Sbjct: 501 RIHGNLELAKRAAKALYE--IEPENPATYITLANIYANAGLWSE 542



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 237/547 (43%), Gaps = 82/547 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   + L LG +VH     + F    F++N L+ MYAKCG+ +D++ LFD +  R 
Sbjct: 93  LIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRD 152

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGI----RP------------ 94
           + SWN++   Y     LE+A   F EM           +SG     +P            
Sbjct: 153 LCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQR 212

Query: 95  ------NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                 N+F+LSS + A A      LG++IHGY I+   + D    +AL+D+Y K G+L+
Sbjct: 213 HERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLD 272

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  ++  D+VSW  +I  C      +    LF+ +  S + PN +T+   L ACA
Sbjct: 273 EARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACA 332

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
               + LG+++H  ++             LV MY+KCG+   AR +F+ M + +L++W  
Sbjct: 333 DHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTS 392

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G+ QNG   EA   F  + + G   DQ T   VL +             HA  V   
Sbjct: 393 LIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSAC-----------THAGLVDKG 441

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            E      +S+ + +G                  D  AC  +I   A+ G  +EA  +  
Sbjct: 442 LE----YFHSIKEKHGLM-------------HTADHYAC--VIDLLARSGRFKEAENIID 482

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M    + PD F+ +SLL  C      E  K+    + +     +     +L N+YA  G
Sbjct: 483 NM---PVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIE-PENPATYITLANIYANAG 538

Query: 449 SIDDADRAFSEIPDRGIV-----SW-------SAMIGGLAQHGRGKEALQMFGQM----L 492
              +      ++ + GIV     SW          + G   H +  +  +  G++     
Sbjct: 539 LWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIK 598

Query: 493 EDGVLPN 499
           E+G +P+
Sbjct: 599 EEGYVPD 605


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/720 (35%), Positives = 408/720 (56%), Gaps = 7/720 (0%)

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSLL 114
           R+ VSWNS+   +    F EE+     EM+         P+  +L +++  CA   +  L
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G+ +HG+++KL  D ++   NAL+DMY+K G + +A  +FK   + ++VSWN ++ G   
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 175 HEHNDWALKLFQQMKSS--EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                    + +QM +   ++  +  T  +A+  C         ++LHC  +K E   + 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           +V    V  YAKCGS+  A+ +FH +  K + +WN +I GH Q+     +      M   
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  T+ ++L + +  +++ + K+VH   ++   E D ++  S++  Y  CG +   
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F       LV+  ++IT Y Q G  + AL ++ +M    I         +  AC+ L
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 360

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            +   G++ H + +K     D F   SL++MYAK GSI  + + F+ + ++   SW+AMI
Sbjct: 361 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 420

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G   HG  KEA+++F +M   G  P+ +T + VL ACNH+GL+ E   + + M+  FG+
Sbjct: 421 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 480

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELV-DTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           +P  +HYAC+ID+LGRAG+  +A+ +V + M  +A+  +W +LL + RI++N+E+G+  A
Sbjct: 481 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 540

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             LF +EPEK   +VLLSN+YA  G W++V KVR+ M +  L+K+ G SWIE+  KV++F
Sbjct: 541 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 600

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
            VG+R     +EI +    +   ++K GY P   +  HD+ E EK + L  HSEKLA+ +
Sbjct: 601 VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 660

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GLI T  G TIRV KNLRICVDCH + + ISK++ REI+VRD  RFHHF+NG CSCG YW
Sbjct: 661 GLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 236/485 (48%), Gaps = 9/485 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C  ++++ LG  VHG  V    D +  + N+L+ MY+KCG   +++ +F     ++
Sbjct: 48  VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 107

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACAGSGDSLLGRKI 118
           VVSWN++   +             ++M+  G  ++ +E ++ + +  C         +++
Sbjct: 108 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 167

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H YS+K  +  +   ANA V  YAK G+L  A  VF  I    + SWNA+I G       
Sbjct: 168 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 227

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             +L    QMK S + P+ FT  S L AC+ ++   LG+++H  +I+  ++ D  V + +
Sbjct: 228 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 287

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + +Y  CG +   + +F  M +K+L++WN VI+G+LQNG    A  +F  M   G+    
Sbjct: 288 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 347

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            ++  V  + +   ++ + ++ HA ++K   E D +I  SLID Y K G +  + K+F  
Sbjct: 348 ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 407

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                  +  +MI  Y   GL +EA+KL+ EMQ    NPD      +L AC +     +G
Sbjct: 408 LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 467

Query: 419 -KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA----FSEIPDRGIVSWSAMIG 473
            + +      FG   +      +++M  + G +D A R      SE  D GI  W +++ 
Sbjct: 468 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI--WKSLLS 525

Query: 474 GLAQH 478
               H
Sbjct: 526 SCRIH 530


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/689 (37%), Positives = 410/689 (59%), Gaps = 22/689 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C+  +D  LG+Q+HGIVV  G D+D   A++L+ MYAK   F++S R+F  IPE++
Sbjct: 144 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++ +  V  + L  A+ FFKEM       ++   +S++ +CA   +  LG ++H 
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  + +D     A +DMYAK  N++DA  +F + E+ +  S+NA+I G    EH   
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 323

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF ++ SS +  +  + +   +ACA ++    G Q++   IK  +  D  V    +D
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 383

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++ EA  +F  M  ++ ++WN +I+ H QNG   E   LF  M R  +  D+ T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI---FK 357
             ++LK+     ++G   ++H+  VK+   S+  +  SLID Y KCG +E+A KI   F 
Sbjct: 444 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 502

Query: 358 ESSAVD-----------------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + + V                   V+  S+I+ Y      E+A  L+  M +  I PD F
Sbjct: 503 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 562

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +++L+ CANL++   GKQ+H  +IK    SD +  ++LV+MY+KCG + D+   F + 
Sbjct: 563 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 622

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R  V+W+AMI G A HG+G+EA+Q+F +M+ + + PNH+T +S+L AC H GL+ +  
Sbjct: 623 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 682

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            +F  M++ +G+ P   HY+ M+DILG++GK + A+EL+  MPF+A+  +W  LLG   I
Sbjct: 683 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 742

Query: 581 YK-NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           ++ NVEV + A   L  ++P+ SS + LLSN+YA AGMW+ V+ +RR M+  KLKKEPG 
Sbjct: 743 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 802

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SW+E+KD+++ F VGD++H R +EIY +L
Sbjct: 803 SWVELKDELHVFLVGDKAHPRWEEIYEEL 831



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 185/625 (29%), Positives = 314/625 (50%), Gaps = 60/625 (9%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C  +  L LG Q H  ++ +GF    FV N L+ +Y    +F+ +  +FD +P R VVSW
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 65  NSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPNEFSLSSM------------ 102
           N + + Y   + + +A  FF  M          +LSG   N  SL S+            
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 103 ---------INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
                    +  C+   D+ LG +IHG  +++G D+D+ +A+AL+DMYAK     +++ V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F+ I   + VSW+A+IAGCV +     ALK F++M+      +   Y S L++CA +   
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            LG QLH   +K +  +D IV    +DMYAKC +M +A+++F      N  ++N +I+G+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            Q     +A  LF  +   G+GFD+ +LS V ++ A  + +    Q++ L++K++   D 
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+ ID YGKC  + +A ++F E    D V+  ++I A+ Q G G E L L++ M   
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I PD F   S+L AC    +   G ++H  I+K G  S++  G SL++MY+KCG I++A
Sbjct: 436 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494

Query: 454 DRAFSEIPDRG--------------------IVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           ++  S    R                      VSW+++I G     + ++A  +F +M+E
Sbjct: 495 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYAC--MIDILGRAG 550
            G+ P+  T  +VL  C +       K  H + ++K+       + Y C  ++D+  + G
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL----QSDVYICSTLVDMYSKCG 610

Query: 551 KFQEAMELVDTMPFQANASVWGALL 575
              ++  L+     + +   W A++
Sbjct: 611 DLHDS-RLMFEKSLRRDFVTWNAMI 634


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 387/637 (60%), Gaps = 2/637 (0%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++  Y+++GN+      F ++   DIVSWNA+IA  + +   D     F+ M    INP 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
               +  L AC       +GR +  +++   I+ + IV   LV MY K G   +A  +F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M  ++++AW+ +++ + +NG   EA  LF  M  +GV  ++ TL + L + AS   +  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
              +H        +S   +  +L++ YGKCG +E AV+ F +    ++VA +++  AYA+
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH--VHIIKFGFMSDT 434
                +A+++   M    + P+S    S+L+ACA ++A +QG+++H    ++  G  SD 
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           +   +LVNMY+KCG++  A   F +I    +V W+++I   AQHG+ ++AL++F +M  +
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G+ P  IT  SVL AC+HAG++ + + HF S     GI P  EH+ CM+D+LGRAG   +
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           + +L+  MPF+ +   W A LGA R Y+N++    AAE LF ++P K + +VLLSN+YA 
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAK 480

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
           AG W +VA++R+ M+     KE G SWIEVKD+V+ F  GD  H R  EI+A+L  ++ L
Sbjct: 481 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 540

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
           + +AGYVP  E  LHDV++  KE ++ +HSEKLA+AF L+ TP G+ IRV KNLR+C DC
Sbjct: 541 MKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDC 600

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           HT+ +FISK+V+REI+VRD NRFH F+NG+CSCG YW
Sbjct: 601 HTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 232/438 (52%), Gaps = 4/438 (0%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           Y++ GN    R+ FD +P   +VSWN+L + Y+     +    FF+ M+L GI P E  +
Sbjct: 5   YSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGI 64

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           S  ++AC  + +  +GR I    +  G + +     ALV MY K+G+  DA +VF  + H
Sbjct: 65  SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSH 124

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+V+W+A++A    + H   AL LF+QM    + PN  T  S L ACA +     G  +
Sbjct: 125 RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALM 184

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  +    I+S  +VG  LV++Y KCG ++ A   F  + EKN++AW+ + + + +N  +
Sbjct: 185 HQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRN 244

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS--VKTAFESDDYIVN 337
            +A  +   M  EG+  + TT  +VL + A+  A+   +++H  +  +    ESD Y++ 
Sbjct: 245 RDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLT 304

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L++ Y KCG++  A  +F + + +DLV   S+I   AQ G  E+AL+L+  M+   + P
Sbjct: 305 ALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 364

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
                +S+L AC++    +QG++  V  I   G   +      +V++  + G I D++  
Sbjct: 365 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDL 424

Query: 457 FSEIP-DRGIVSWSAMIG 473
              +P +   V+W A +G
Sbjct: 425 LLHMPFEPHPVAWMAFLG 442



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 165/306 (53%), Gaps = 2/306 (0%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L ACT  +++ +G  +   ++ TG + +  V  +LV MY K G+  D+  +F  +  R V
Sbjct: 68  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDV 127

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+W+++ + Y       EA+  F++M L G+ PN+ +L S ++ACA  GD   G  +H  
Sbjct: 128 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 187

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
               G  S +    ALV++Y K G +E AV  F  I   ++V+W+A+ A    ++ N  A
Sbjct: 188 VEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDA 247

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH--CSLIKMEIKSDPIVGVGLV 239
           +++  +M    + PN  T+ S L ACA +   + GR++H    ++   ++SD  V   LV
Sbjct: 248 IRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALV 307

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY+KCG++  A  +F  +   +L+ WN +I+ + Q+G   +A  LF  M  EG+     
Sbjct: 308 NMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 367

Query: 300 TLSTVL 305
           T ++VL
Sbjct: 368 TFTSVL 373



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 15/219 (6%)

Query: 1   VLKACTSKKDLFLGLQVH--GIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           VL AC +   L  G ++H    V+  G +SD +V  +LV MY+KCGN   +  +FD I  
Sbjct: 269 VLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAH 328

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
             +V WNSL +        E+A+  F+ M L G++P   + +S++ AC+ +G    GRK 
Sbjct: 329 LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK- 387

Query: 119 HGYSIKLGYDSDMFSA----NALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCV 173
             + +    D  +F        +VD+  + G + D+  +   +   P  V+W A +  C 
Sbjct: 388 --HFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACR 445

Query: 174 LHEHND---WALKLFQQMKSSEINPNMFTYTSALKACAG 209
            + + D   WA +   Q+   +  P  +   S + A AG
Sbjct: 446 TYRNMDRAIWAAENLFQLDPRKRAP--YVLLSNMYAKAG 482


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/653 (41%), Positives = 387/653 (59%), Gaps = 13/653 (1%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           D ++FS NA++  YAK      A  +F  I  PD+VS+N +I+          AL LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+   ++ + FT ++ + AC   ++  +G QLH   +     S   V   L+  Y K G 
Sbjct: 131 MREMGLDMDGFTLSAVITACCD-DVGLIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 248 MDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           +D+A+ +F+ M   ++ ++WN +I  + Q+    +A  LF  M R G+  D  TL++VL 
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVDLV 365
           +    + +    Q H   +KT F  + ++ + LID Y KCG  + D  K+F+E +  DLV
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 366 ACTSMITAYAQFG-LGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQVH 422
              +M++ Y+Q     E+AL+ + +MQ     P+  SFVC  +++AC+NLS+  QGKQ+H
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVC--VISACSNLSSPSQGKQIH 366

Query: 423 VHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
              +K    S+  +  N+L+ MY+KCG++ DA R F  + +   VS ++MI G AQHG  
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            E+L +F  MLE  + P  IT +SVL AC H G V E  ++F  M++KF I+P  EHY+C
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+LGRAGK  EA  L+  MPF   +  W +LLGA R + N+E+   AA  +  +EP  
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           ++ +V+LSN+YASAG W+ VA VR+FM+D  +KK+PG SWIEVK +++ F   D SH   
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDL---HDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
           KEIY  L+E+S  + +AGYVP V   L         EKE  L HHSEKLAVAFGLI+T  
Sbjct: 607 KEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKD 666

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G  + V KNLRIC DCH + +FIS I  REI VRD +RFH F+ G CSCG YW
Sbjct: 667 GEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 274/531 (51%), Gaps = 41/531 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK C +++DL  G  +H + + +      + +N  +++Y+KCG    +R+         
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 LFD IPE  +VS+N+L S Y  C     A+  F  M  
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+  + F+LS++I AC    D  L  ++H  ++  G+DS +   NAL+  Y K G+L+D
Sbjct: 134 MGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 150 AVAVFKDIEH-PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           A  VF  +    D VSWN++I     H+    AL LFQ+M    +N +MFT  S L A  
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWN 267
            +E    G Q H  LIK     +  VG GL+D+Y+KC G M + R +F  + E +L+ WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVHALSV 325
            ++SG+ QN   +E A L  +   +G+G+  +  +   V+ + ++  +    KQ+H+L++
Sbjct: 312 TMVSGYSQNEEFLEDA-LECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 326 KTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           K+   S+   V N+LI  Y KCG+++DA ++F   +  + V+  SMI  YAQ G+  E+L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNM 443
            L+  M +R+I P S    S+L+ACA+    E+G    ++   KF    +    + ++++
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 444 YAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             + G + +A+   + +P + G + W++++G    HG  + A++   Q+L+
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 199/438 (45%), Gaps = 47/438 (10%)

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           ++I+  +  +   LK C        G+ LH   IK  I          + +Y+KCG +  
Sbjct: 2   NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61

Query: 251 AR-------------------------------MIFHLMPEKNLIAWNIVISGHLQNGGD 279
           AR                                +F  +PE +L+++N +IS +   G  
Sbjct: 62  ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
             A  LF  M   G+  D  TLS V+   A    +G+  Q+H+++V + F+S   + N+L
Sbjct: 122 APALGLFSGMREMGLDMDGFTLSAVI--TACCDDVGLIGQLHSVAVSSGFDSYVSVNNAL 179

Query: 340 IDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           +  YGK G ++DA ++F     + D V+  SMI AY Q   G +AL L+ EM  R +N D
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-GSIDDADRAF 457
            F  +S+L A   L     G Q H  +IK GF  ++  G+ L+++Y+KC G + D  + F
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVF 299

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKE-ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
            EI +  +V W+ M+ G +Q+    E AL+ F QM   G  PN  + V V+ AC++    
Sbjct: 300 EEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359

Query: 517 AEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           ++ K  H  +++       +    A +I +  + G  Q+A  L D M      S+   + 
Sbjct: 360 SQGKQIHSLALKSDIPSNRISVDNA-LIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIA 418

Query: 576 GAARIYKNVEVGQHAAEM 593
           G A         QH  EM
Sbjct: 419 GYA---------QHGIEM 427



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 4/213 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V+ AC++      G Q+H + + +   S+   V N+L+ MY+KCGN  D+RRLFD + E 
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKI 118
           + VS NS+ + Y       E++  F+ M+   I P   +  S+++ACA +G    G    
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYF 468

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           +    K   + +    + ++D+  + G L +A  +   +  +P  + W +++  C  H +
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528

Query: 178 NDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
            + A+K   Q+   E  N   +   S + A AG
Sbjct: 529 IELAVKAANQVLQLEPSNAAPYVVLSNMYASAG 561


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/738 (35%), Positives = 418/738 (56%), Gaps = 5/738 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+++ M  + G    + R+F  +PER V SWN +   Y     LEEA+  +  M+ +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RP+ ++   ++ +C G  D  +GR++H + ++ G+  ++   NAL+ MYAK G++  A 
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D +SWNA+IAG   +   +  L+LF  M   E+ PN+ T TS   A   + 
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
                +++H   +K    +D      L+ MYA  G M +AR +F  M  ++ ++W  +IS
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMIS 370

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ +NG   +A  ++  M    V  D  T+++ L + A   ++ V  ++H L+    F S
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMS 430

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
              + N+L++ Y K   ++ A+++FK     D+V+ +SMI  +       EAL  +  M 
Sbjct: 431 YVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 490

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             ++ P+S    + L ACA   A   GK++H H+++ G   + +  N+L+++Y KCG   
Sbjct: 491 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTG 549

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F     + +VSW+ MI G   HG G+ AL  F QM++ G  P+ +T V++LCAC+
Sbjct: 550 YAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACS 609

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             G+V+E    F SM  K+ I P  +HYACM+D+L R G+  EA   ++ MP   +A+VW
Sbjct: 610 RGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVW 669

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALL   RI+++VE+G+ AA+ +  +EP  +  HVLL ++YA AG+WD +A+VR+ M++ 
Sbjct: 670 GALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREK 729

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            L  + G SW+EVK  V+ F   D SH + +EI   L+ + + +  +G  P VE+  H  
Sbjct: 730 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAP-VES--HSP 786

Query: 692 EESE-KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           E+   K+ +   HSE+LAVAFGLI T PG +I V KN   C  CH   + IS IV R+II
Sbjct: 787 EDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDII 846

Query: 751 VRDVNRFHHFRNGSCSCG 768
           VRD  + HHF++GSCSCG
Sbjct: 847 VRDSKQVHHFKDGSCSCG 864



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 245/480 (51%), Gaps = 3/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL++C    D  +G +VH  V+  GF  +  V N+L+ MYAKCG+ + +R++FD++    
Sbjct: 201 VLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMD 260

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ + +         +  F  M+   ++PN  +++S+  A     D    +++HG
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G+ +D+   N+L+ MYA +G +  A  VF  ++  D +SW A+I+G   +   D 
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK 380

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+++  M+ + ++P+  T  SAL ACA +   ++G +LH         S  +V   L++
Sbjct: 381 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLE 440

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +D+A  +F  MPEK++++W+ +I+G   N  + EA   F  M  + V  +  T
Sbjct: 441 MYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVT 499

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  A+   K++HA  ++     + Y+ N+LID Y KCG    A   F    
Sbjct: 500 FIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHG 559

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D+V+   MI  +   G GE AL  + +M      PD     +LL AC+      +G +
Sbjct: 560 AKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWE 619

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           + H    K+  + +      +V++ ++ G + +A    +E+P       W A++ G   H
Sbjct: 620 LFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 679


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/689 (36%), Positives = 391/689 (56%), Gaps = 9/689 (1%)

Query: 92  IRPNEFSLSS------MINACAGSGDSLLGRKIHGYSI--KLGYDSDMFSANALVDMYAK 143
           +RPN  S SS      ++   A + +  +G+ IH + I      ++ +   N+L++ YAK
Sbjct: 19  LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTS 202
           V  +  A  +F  +   ++VSW+A++ G +L+  +   ++L + M S   ++PN +    
Sbjct: 79  VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           A+ +C      E GRQ H  L+K        V   LV MY+KC  + +A  +++ +P  +
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVND 198

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           ++A+N ++S  ++NG   E   +   M  E V +D+ T        AS + + +   VH 
Sbjct: 199 IVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHG 258

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             + +  E D Y+ +++I+ YGKCG    A  +F    + ++V  T+++ +  Q G  EE
Sbjct: 259 KMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEE 318

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL L+ +M+   +  + F  + LLNACA LSA   G  +H H  K GF      GN+L+N
Sbjct: 319 ALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALIN 378

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MYAK G I+ A + FS++  R I++W+AMI G + HG GK+AL +F  ML     PN++T
Sbjct: 379 MYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVT 438

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
              VL AC H GLV E  ++   + K+FG+QP  EHY C++ +L + G+  EA   + T 
Sbjct: 439 FTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTA 498

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           P + +   W  LL A  +++N  +G+  AE +  ++P    T+ LLSNIYA    WD V 
Sbjct: 499 PVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVV 558

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           KVR+ M+D K+KKEPG+SWIE+ +  + FT  D  H    + Y K+ E+  ++   GY P
Sbjct: 559 KVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTP 618

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
            +   LHDVE+ +KE  L +HSEKLA+A+GL+  P  A+I V KNLRIC DCH++   IS
Sbjct: 619 DIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLIS 678

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K+ +R I+VRD NRFHHFR+G CSC  YW
Sbjct: 679 KVTNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 254/483 (52%), Gaps = 5/483 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFV--ANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +LK     K+L +G  +H  ++ T   ++  +   NSL+  YAK      +  LFD +PE
Sbjct: 35  LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRK 117
           R+VVSW++L + Y+   F  + +   K+M+  G + PNE+ L+  I++C   G    GR+
Sbjct: 95  RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            HG  +K G+    +  NALV MY+K   ++DA+ V+ ++   DIV++N++++  V + +
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
               L++ + M S  +  +  T+ +A   CA ++   LG  +H  ++  +++ D  V   
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           +++MY KCG    AR +F  +  +N++ W  V++   QNG   EA +LF  M +E V  +
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + T + +L + A   A      +H  S K+ F+    + N+LI+ Y K G +E A K+F 
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFS 394

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +    D++   +MI  ++  GLG++AL ++ +M   E +P+    + +L+AC +L   ++
Sbjct: 395 DMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE 454

Query: 418 GKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGL 475
           G     H++K FG          +V++ +K G +++A       P +  +V+W  ++   
Sbjct: 455 GFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC 514

Query: 476 AQH 478
             H
Sbjct: 515 HVH 517



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 199/403 (49%), Gaps = 13/403 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + +C  +  +  G Q HG+++ TGF    +V N+LV MY+KC    D+  +++ +P   +
Sbjct: 140 ISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDI 199

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V++NS+ S  V   +L E +   + MV   ++ ++ +  +  + CA   D  LG  +HG 
Sbjct: 200 VAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGK 259

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            +    + D + ++A+++MY K G    A  VF  ++  ++V W AV+A C  +   + A
Sbjct: 260 MLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEA 319

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF +M+   +  N FTY   L ACAG+  +  G  LH    K   K   +VG  L++M
Sbjct: 320 LNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINM 379

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAK G ++ A+ +F  M  +++I WN +I G   +G   +A  +F  M       +  T 
Sbjct: 380 YAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTF 439

Query: 302 STVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + VL +      +G+ ++    +H L  +   +        ++    K G + +A + F 
Sbjct: 440 TGVLSACGH---LGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEA-RNFM 495

Query: 358 ESSAV--DLVACTSMITA---YAQFGLGEEALKLYLEMQDREI 395
            ++ V  D+VA  +++ A   +  +GLG    +  LEM   ++
Sbjct: 496 RTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDV 538



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 5/204 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC        G  +HG    +GF     V N+L+ MYAK G+   ++++F  +  R 
Sbjct: 341 LLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRD 400

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           +++WN++   + H    ++A+  F++M+ +   PN  + + +++AC   G    G   +H
Sbjct: 401 IITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLH 460

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHEHN 178
               + G    +     +V + +K G L +A    +      D+V+W  ++  C  H H 
Sbjct: 461 HLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC--HVHQ 518

Query: 179 DWALKLFQQMKSSEINPN-MFTYT 201
           ++ L  +      E++PN + TYT
Sbjct: 519 NYGLGRWVAEFVLEMDPNDVGTYT 542


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/793 (34%), Positives = 427/793 (53%), Gaps = 25/793 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF---DSDE----FVANSLVVMYAKCGNFIDSRRLF 53
           +LK C    DL  G ++H  +  +G    D +E    F+ N LV MY KCG   +++R F
Sbjct: 20  LLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           D+I  +++ SW S+   Y H     +A+  F +M+ +G+ P+     + +N C       
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLE 139

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            G  IH        DSD+   NALV MY K G L+ A  +F  +E  +++SW  +++   
Sbjct: 140 DGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFA 199

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME-LKELGRQLHCSLIKMEIKSDP 232
            +        L + M    I P+     + L  C+    L E     H  ++   +  + 
Sbjct: 200 ENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREA 259

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKN---LIAWNIVISGHLQNGGDMEAASLFPWM 289
           +V   L+ M+A+CG +D+AR IF  + + +   +  WN +I+ +   G   EA  L   +
Sbjct: 260 VVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL 319

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             +GV  +  T  + L + +S Q     + +H L  ++ F+ +  + N+L+  YG+CG +
Sbjct: 320 QLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGRCGSL 376

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNA 408
            D+ K+F E +  DL +  S I A+A  G  +E +KL  +M+ +  + P S    + ++A
Sbjct: 377 LDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSA 436

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C  L+     K+VH    + G  S+T   N LV+MY K G +D A   F     R + +W
Sbjct: 437 CGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTW 496

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           +AM G   Q G  +  L +   M  DG  P+ +T VS+L  C H+GL+ EA+++F +M +
Sbjct: 497 NAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRR 556

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS--VWGALLGAARIYKNVEV 586
           +FGI P  +HY+C+ID+L RAG+ Q+A + +  +   + AS  +W ALLGA R   +   
Sbjct: 557 EFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGDSSS 616

Query: 587 GQHA----AEMLFAIEP----EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
                   A  +  +EP    + S+ HV L+NI A++G WD    +R+ M +  L+KEPG
Sbjct: 617 RARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPG 676

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            S I VK++++ F  GDR H R +EIYA+L  +   +   GYV       H+V E++K  
Sbjct: 677 RSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRD 736

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
           LL  HSEKLAVAFG+++TPPG+++R+ KNLR C DCHT+ + IS I  REI+VRD NRFH
Sbjct: 737 LLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFH 796

Query: 759 HFRNGSCSCGGYW 771
           HFRNGSCSCG YW
Sbjct: 797 HFRNGSCSCGDYW 809


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/645 (40%), Positives = 383/645 (59%), Gaps = 48/645 (7%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE-HNDWALKLFQ 186
           ++++ ++N L+  Y + G+++ AV VF+D++    V+WN+++A       H ++A +LF+
Sbjct: 38  NNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFE 97

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           ++      PN  +Y   L AC       LG              D      ++   A+ G
Sbjct: 98  KIP----QPNTVSYNIML-AC---HWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVG 149

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            M EAR +F  MPEKN ++W+ ++SG++   GD++AA              +   +  ++
Sbjct: 150 LMGEARRLFSAMPEKNCVSWSAMVSGYVA-CGDLDAAV-------------ECFYAAPMR 195

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           SV ++ A                         +I  Y K G VE A ++F+E S   LV 
Sbjct: 196 SVITWTA-------------------------MITGYMKFGRVELAERLFQEMSMRTLVT 230

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             +MI  Y + G  E+ L+L+  M +  + P++   +S+L  C+NLSA + GKQVH  + 
Sbjct: 231 WNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 290

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K    SDT AG SLV+MY+KCG + DA   F +IP + +V W+AMI G AQHG GK+AL+
Sbjct: 291 KCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALR 350

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F +M ++G+ P+ IT V+VL ACNHAGLV     +F +M + FGI+   EHYACM+D+L
Sbjct: 351 LFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLL 410

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAGK  EA++L+ +MPF+ + +++G LLGA RI+KN+ + + AA+ L  ++P  ++ +V
Sbjct: 411 GRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYV 470

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
            L+N+YA+   WD+VA +RR MKDN + K PG SWIE+   V+ F   DR H     I+ 
Sbjct: 471 QLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHE 530

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           KL ++   +  AGYVP +E  LHDV E  KEQLL  HSEKLA+AFGL+  P G  IRV K
Sbjct: 531 KLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFK 590

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLR+C DCH++ ++IS I  REIIVRD  RFHHF++G CSC  YW
Sbjct: 591 NLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 35/354 (9%)

Query: 34  NSLVVMYAK-CGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           NS++  +AK  G+F  +R+LF+ IP+ + VS+N + +C+ H   + +A  FF  M L  +
Sbjct: 76  NSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDV 135

Query: 93  RPNEFSLSSMINACAGSGDSLLGRK----------------IHGY--------SIKLGYD 128
                S ++MI+A A  G     R+                + GY        +++  Y 
Sbjct: 136 A----SWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYA 191

Query: 129 SDMFSA---NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           + M S     A++  Y K G +E A  +F+++    +V+WNA+IAG V +   +  L+LF
Sbjct: 192 APMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLF 251

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           + M  + + PN  + TS L  C+ +   +LG+Q+H  + K  + SD   G  LV MY+KC
Sbjct: 252 RTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKC 311

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G + +A  +F  +P K+++ WN +ISG+ Q+G   +A  LF  M +EG+  D  T   VL
Sbjct: 312 GDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVL 371

Query: 306 KSV--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            +   A    +GV +  + +      E+       ++D  G+ G + +AV + K
Sbjct: 372 LACNHAGLVDLGV-QYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIK 424



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 12/240 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C++   L LG QVH +V      SD     SLV MY+KCG+  D+  LF  IP + 
Sbjct: 269 VLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           VV WN++ S Y      ++A+  F EM   G++P+  +  +++ AC  +G   LG +  +
Sbjct: 329 VVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFN 388

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI---EHPDIVSWNAVIAGCVLHE 176
                 G ++       +VD+  + G L +AV + K +    HP I  +  ++  C +H+
Sbjct: 389 TMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAI--YGTLLGACRIHK 446

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           + +  L  F      E++P + T    L      +     R  H + I+  +K + +V +
Sbjct: 447 NLN--LAEFAAKNLLELDPTIATGYVQLANVYAAQ----NRWDHVASIRRSMKDNNVVKI 500


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 267/688 (38%), Positives = 398/688 (57%), Gaps = 36/688 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L++   +      L  A++VF  I+ P+++ WN +  G 
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      AL L+  M S  + PN +T+   LKACA  +    G+Q+H  ++K+    D 
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
            V   L+ MY K G  ++AR +F                                 +P K
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN +ISG+ + G   EA  LF  M +  V  D++T+ TVL + A   +I + +QVH
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +      F S+  IVN+LID Y KCG VE A  +F+  S  D+++  ++I  Y    L +
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
           EAL L+ EM     +P+     S+L ACA+L A + G+ +HV+I K   G  + +    S
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG I+ A + F  + +R + SW+AMI G A HGR   A  +F +M +DG+ P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V +L AC+H+G++   +H F SM + + I P  EHY CMID+LG +G F+EA E++
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           ++M    +  +W +LL A +++ NVE+G+  A+ L  IEP+ S ++VLLSNIYA+AG W+
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWN 558

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            VAK R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL +AG
Sbjct: 559 EVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAG 618

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + +
Sbjct: 619 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSC 767
            ISKI  REII RD  RFHHF +G CSC
Sbjct: 679 LISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 240/500 (48%), Gaps = 71/500 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LKAC   K    G Q+HG V+  G D D +V  SL+ MY K G   D+R+         
Sbjct: 109 LLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRD 168

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 +FD IP + VVSWN+L S Y      +EA+  FKEM+ 
Sbjct: 169 VVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK 228

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + ++P+E ++ ++++ACA S    LGR++H +    G+ S++   NAL+D+Y K G +E 
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S  +PN  T  S L ACA 
Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAH 348

Query: 210 MELKELGRQLHCSLIK-MEIKSDP-IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K ++  S+P  +   L+DMYAKCG ++ A+ +F  M  ++L +WN
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    A  +F  M ++G+  D  T   +L + +    + + + +       
Sbjct: 409 AMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI------- 461

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F S  +DY +   ++ YG                         MI      GL +EA +
Sbjct: 462 -FRSMTEDYKITPKLEHYG------------------------CMIDLLGHSGLFKEAEE 496

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   M   E++PD  +  SLL AC      E G+    ++IK     ++ +   L N+YA
Sbjct: 497 MINSM---EMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIE-PKNSGSYVLLSNIYA 552

Query: 446 KCGSIDDADRAFSEIPDRGI 465
             G  ++  +  + + D+G+
Sbjct: 553 TAGRWNEVAKRRALLNDKGM 572



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 258/591 (43%), Gaps = 76/591 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLV---VMYAKCGNFIDSRRLFDAIP 57
           +L  C + + L +   +H  ++ TG  +  +  + L+   V+         +  +FD+I 
Sbjct: 8   LLHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQ 64

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E +++ WN++F  +        A+  +  M+  G+ PN ++   ++ ACA S     G++
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------------ 159
           IHG+ +KLG D D++   +L+ MY K G  EDA  VF    H                  
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184

Query: 160 -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                         D+VSWNA+I+G     +   AL+LF++M  + + P+  T  + L A
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     ELGRQ+H  +      S+  +   L+D+Y KCG ++ A  +F  +  K++I+W
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G+       EA  LF  M R G   ++ T+ ++L + A   AI + + +H    K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364

Query: 327 --TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
                 +   +  SLID Y KCG +E A ++F       L +  +MI  +A  G    A 
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAF 424

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            ++  M+   I PD      LL+AC++    + G+ +      F  M++ +     +  Y
Sbjct: 425 DIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI------FRSMTEDYKITPKLEHY 478

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
                                     MI  L   G  KEA +M   M  D   P+ +   
Sbjct: 479 G------------------------CMIDLLGHSGLFKEAEEMINSMEMD---PDGVIWC 511

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAGKFQE 554
           S+L AC   G V   +   +++ K   I+P     Y  + +I   AG++ E
Sbjct: 512 SLLKACKMHGNVELGESFAQNLIK---IEPKNSGSYVLLSNIYATAGRWNE 559


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/780 (35%), Positives = 434/780 (55%), Gaps = 38/780 (4%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D  +AN+L+V Y K G   ++ ++F  +   +VVS+ ++ S +   +   +A+  F  M 
Sbjct: 104 DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMR 163

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            SGI  NEFS  +++  C    D  LG ++H   IK+G+ +  F +NAL+ +Y K G L+
Sbjct: 164 SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD 223

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKAC 207
             + +F ++ H DI SWN VI+  V     + A +LF+ M+  +    + FT ++ L A 
Sbjct: 224 SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAA 283

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM------------------- 248
            G+    +GR++H  +IK+  +S+  V   L+  Y KCGS+                   
Sbjct: 284 RGLA-SMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWT 342

Query: 249 ------------DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                       D A  +F  MP +N I++N ++SG  QNG   +A + F  M  EGV  
Sbjct: 343 EMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVEL 402

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              TL+ VL +        + KQ+H   +K  F S+  I  +L+D   +CG + DA K+F
Sbjct: 403 TDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMF 462

Query: 357 KESSAVDL--VACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLS 413
            + S      +  TSMI  YA+    EEA+ L+ + Q +  +  D    +++L  C  L+
Sbjct: 463 SQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLA 522

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
            +E GKQ+H H +K GF+SD   GNS++ MY+KC ++DDA + F+ +P   IVSW+ +I 
Sbjct: 523 FHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIA 582

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH--AGLVAEAKHHFESMEKKFG 531
           G   H +G EAL ++ +M + G+ P+ +T V ++ A  H  + LV   +  F SM+  + 
Sbjct: 583 GHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYH 642

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P  EHY  ++ +LG  G  +EA E+++ MP +  ASVW ALL A RI+ N  +G+ AA
Sbjct: 643 IDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAA 702

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           + L A++P   ST++L+SN+Y++ G W     VR  M+    +K PG SWI  ++KV++F
Sbjct: 703 KHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSF 762

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
              D+SH ++K+I++ L+ +     KAGYVP     LH+VEE +K+  L++HS K+A  +
Sbjct: 763 YARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATY 822

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GL+ T PG  IR+ KN+ +C DCHT  +++S +  REI +RD +  H F NG CSC  YW
Sbjct: 823 GLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 258/534 (48%), Gaps = 59/534 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C    DL LG Q+H IV+  GF +  FV+N+L+ +Y KCG      +LFD +P R 
Sbjct: 177 ILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRD 236

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + SWN++ S  V     E A   F++M  + G R + F+LS+++ A  G   S++GR+IH
Sbjct: 237 IASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA-SMVGREIH 295

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSW-------------- 165
            + IK+G++S++   NAL+  Y K G+++  VA+F+ +   D+++W              
Sbjct: 296 AHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTD 355

Query: 166 -----------------NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
                            NA+++G   +     AL  F +M    +    FT T  L AC 
Sbjct: 356 LALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACG 415

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI--FHLMPEKNLIAW 266
            +   ++ +Q+H  ++K    S+  +   L+DM  +CG M +A+ +       +   I W
Sbjct: 416 LLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIW 475

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC--------- 317
             +I G+ +N    EA SLF     EG        + V+  VAS   +GVC         
Sbjct: 476 TSMICGYARNAQPEEAISLFCQSQLEG--------AMVVDKVASTAVLGVCGTLAFHEMG 527

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ+H  ++K+ F SD  + NS+I  Y KC +++DA+K+F    A D+V+   +I  +   
Sbjct: 528 KQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLH 587

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G+EAL ++ +M+   I PD+     +++A    N +  +  +++ + +     +  T 
Sbjct: 588 RQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTV 647

Query: 436 AG-NSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEA 484
               SLV +    G +++A+   +++P     S W A++     H     GK A
Sbjct: 648 EHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRA 701



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 4/173 (2%)

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           LL+        E  K VH  I K     D    N+L+  Y K G + +A + F  +    
Sbjct: 78  LLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 135

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VS++AMI G A+  R ++A+++F +M   G+  N  + V++L  C    L  E      
Sbjct: 136 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRL-LDLELGCQLH 194

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           ++  K G          ++ + G+ G     ++L D MP +  AS W  ++ +
Sbjct: 195 AIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIAS-WNTVISS 246


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/557 (43%), Positives = 356/557 (63%), Gaps = 2/557 (0%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G+++HC ++K+  + D  V   LV MY++ G + +AR +F  MP ++  +WN +ISG+ Q
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG   EA  +   M  EGV  D  T+++VL   A    I   K +H   +K   E + ++
Sbjct: 73  NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFV 132

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-RE 394
            N+LI+ Y K G +  A K+F      D+V+  ++IT YAQ GL  EA+++YL M++  E
Sbjct: 133 SNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEE 191

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           I P+     S+L A +++ A +QG ++H  +IK    SD F G  L++MY KCG +DDA 
Sbjct: 192 IIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAI 251

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
             F ++P +  V W+AMI     HG G++AL++F +M  + V P+HIT VS+L AC+H+G
Sbjct: 252 SLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSG 311

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           LV++A+  F  ME+++GI+P  +HY CM+D+ GRAG+ + A   +  MP Q +AS WGAL
Sbjct: 312 LVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGAL 371

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           L A RI+ N+E+G+HA+E LF ++ E    +VLLSNIYA+ G W+ V  VR   +D  L+
Sbjct: 372 LNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLR 431

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           K PG S I + +KV  F  G+++H + +EIY +L +++  +   GYVP     L DVEE 
Sbjct: 432 KNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEED 491

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           EKE +L  HSE+LA+A+G+I+T P   IR+ KNLR+C DCHT  +FIS I  REIIVRD 
Sbjct: 492 EKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDS 551

Query: 755 NRFHHFRNGSCSCGGYW 771
           +RFHHF+ G+CSCG YW
Sbjct: 552 SRFHHFKGGTCSCGDYW 568



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 241/477 (50%), Gaps = 44/477 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    DL  G ++H +V+  GF+ D FVA SLV MY++ G   D+R+LFD +P R 
Sbjct: 3   VVKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SWN++ S Y       EA+    EM L G++ +  +++S++  CA  GD L G+ IH 
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK G + ++F +NAL++MYAK G+L  A  VF  +   D+VSWN +I G   +     
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASE 178

Query: 181 ALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A++++  M+   EI PN  T+ S L A + +   + G ++H  +IK  + SD  VG  L+
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KCG +D+A  +F+ +P KN + WN +IS +  +G   +A  LF  M  E V  D  
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  ++L + +           H+  V  A     +  N + + YG    ++ ++K +   
Sbjct: 299 TFVSLLSACS-----------HSGLVSDA----QWCFNMMEEEYG----IKPSLKHY--- 336

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                  C  M+  + + G  E A     +M    I PD+    +LLNAC      E GK
Sbjct: 337 ------GC--MVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACRIHGNIELGK 385

Query: 420 QVHVHIIKFGFMSDTFAGNSLV-NMYAKCGSIDDADRAFSEIPDRGI---VSWSAMI 472
                +  F   S+      L+ N+YA  G  +  D   S   DRG+     WS++I
Sbjct: 386 HASERL--FEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/772 (33%), Positives = 434/772 (56%), Gaps = 7/772 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L ACT+  DL  GL++H  +   G + +  V N+L+ MY++CG+  ++R++FD +   +
Sbjct: 308  ILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLN 367

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
              +WN++ + Y     +EEA   F+ M   G +P++F+ +S++  CA   D   G+++H 
Sbjct: 368  RTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHS 426

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                 G+ +D+  A AL+ MYAK G+ E+A  VF  +   +++SWNA I+ C  H+    
Sbjct: 427  QIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKE 486

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A + F+QM+  ++NP+  T+ + L +C   E  E GR +H  + +  + S+  V   L+ 
Sbjct: 487  AFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALIS 546

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY +CG++ +AR +F+ +  ++L +WN +I+ ++Q+G +  A  LF     EG   D+ T
Sbjct: 547  MYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYT 606

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               VL++VA+ + +   + +H L  K  F  D  ++ +LI  Y KCG + DA  +F    
Sbjct: 607  FINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQ 666

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              D+V   +M+ AYA    G++ALKL+ +MQ   +NPDS   S+ LNACA L+A E GK+
Sbjct: 667  EKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKK 726

Query: 421  VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            +H  + + G  +DT   NSL+ MY++CG +  A + F ++  R I SW+A+I G  Q+G+
Sbjct: 727  IHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQ 786

Query: 481  GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            G  AL+ +  ML   ++PN  T  S+L +    G   +A    ES++K++ ++P ++HYA
Sbjct: 787  GNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYA 846

Query: 541  CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
             M+  LGRAG  +EA E ++ +  ++ A +W +LL A RI+ NVE+ + A E L   + +
Sbjct: 847  YMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQ 906

Query: 601  KSSTHV-LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             S      L +IYA+AG W++V+ ++  M++  L      + IEV  + + F     S  
Sbjct: 907  ASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCT-IEVNSEFHNFIANHLSPQ 965

Query: 660  RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
                +  K++E+   +   G+   ++      +  EKE L +   E LAVA+GL  T  G
Sbjct: 966  IG--VQCKIEELVRKMTDRGFS--LDPQYASNDSREKECLFFQCPELLAVAYGLEHTASG 1021

Query: 720  ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +IR   + R+    H   +FIS+   R I+VRD N FH F +G CSCG YW
Sbjct: 1022 VSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFEDGICSCGDYW 1073



 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 198/621 (31%), Positives = 330/621 (53%), Gaps = 12/621 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S   L  G Q+H  +   G++SD  V+ +L+ MY KCG+   +R++F+ + ER+
Sbjct: 207 ILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 266

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S YV      EA+  F++++ SGI+PN+ S +S++ AC    D   G K+H 
Sbjct: 267 VVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHA 326

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC---VLHEH 177
           Y  + G + ++   NAL+ MY++ G+L +A  VF ++   +  +WNA+IAG    ++ E 
Sbjct: 327 YIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLMEE- 385

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              A +LF+ M+     P+ FTY S L  CA     + G++LH  +     ++D  V   
Sbjct: 386 ---AFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATA 442

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MYAKCGS +EAR +F+ MPE+N+I+WN  IS   ++    EA   F  M R+ V  D
Sbjct: 443 LISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPD 502

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T  T+L S  S + +   + +H    +    S++++ N+LI  YG+CG++ DA ++F 
Sbjct: 503 HITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFY 562

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                DL +  +MI A  Q G    A  L+ + +      D +   ++L A ANL   + 
Sbjct: 563 RIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDA 622

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+ +H  + K GF  D     +L+ MY+KCGS+ DA+  FS + ++ +V W+AM+   A 
Sbjct: 623 GRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAH 682

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
             RG++AL++F QM  +GV P+  T  + L AC     V   K    +  K+ G++    
Sbjct: 683 SDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGK-KIHAQLKEAGMETDTR 741

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA--ARIYKNVEVGQHAAEMLF 595
               +I++  R G    A ++ + M    + + W AL+         N+ +  +   +  
Sbjct: 742 VSNSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNALIAGYCQNGQGNIALEYYELMLRA 800

Query: 596 AIEPEKSSTHVLLSNIYASAG 616
           +I P K++   +LS+ YA  G
Sbjct: 801 SIVPNKATFTSILSS-YAQLG 820



 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 183/613 (29%), Positives = 322/613 (52%), Gaps = 11/613 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+ C   K L  G +VH  +    F  D ++ N L+ MY+KCG+  D+  +F A+ ++ V
Sbjct: 107 LQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDV 166

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ S Y      +EA   F +M   G++PN+ +  S+++AC        G +IH  
Sbjct: 167 VSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSR 226

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             K GY+SD+  + AL++MY K G+LE A  VF ++   ++VSW A+I+G V H  +  A
Sbjct: 227 IAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREA 286

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LF+++  S I PN  ++ S L AC        G +LH  + +  ++ + +VG  L+ M
Sbjct: 287 LALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISM 346

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y++CGS+  AR +F  +   N   WN +I+G+ + G   EA  LF  M ++G   D+ T 
Sbjct: 347 YSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTY 405

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L   A    +   K++H+    T +++D  +  +LI  Y KCG  E+A K+F +   
Sbjct: 406 ASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPE 465

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++++  + I+   +  LG+EA + + +M+  ++NPD     +LLN+C +    E+G+ +
Sbjct: 466 RNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYI 525

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  I ++G +S+    N+L++MY +CG++ DA   F  I  R + SW+AMI    QHG  
Sbjct: 526 HGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGAN 585

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
             A  +F +   +G   +  T ++VL A  +   + +A      + +K G          
Sbjct: 586 GSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDL-DAGRMIHGLVEKGGFGKDIRVLTT 644

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM-----LFA 596
           +I +  + G  ++A  +  T+  + +   W A+L A   Y + + GQ A ++     L  
Sbjct: 645 LIKMYSKCGSLRDAENVFSTVQ-EKDVVCWNAMLAA---YAHSDRGQDALKLFQQMQLEG 700

Query: 597 IEPEKSSTHVLLS 609
           + P+ S+    L+
Sbjct: 701 VNPDSSTYSTALN 713



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 270/487 (55%), Gaps = 3/487 (0%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G++ N    +  +  C  +     G+K+H +     +  D++  N L+ MY+K G++EDA
Sbjct: 95  GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF+ +E  D+VSWNA+I+G  LH  +  A  LF QM+   + PN  T+ S L AC   
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSP 214

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
              E G Q+H  + K   +SD  V   L++MY KCGS++ AR +F+ M E+N+++W  +I
Sbjct: 215 IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 274

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           SG++Q+G   EA +LF  + R G+  ++ + +++L +  +   +G   ++HA   +   E
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLE 334

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            +  + N+LI  Y +CG + +A ++F    +++     +MI  Y + GL EEA +L+  M
Sbjct: 335 QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAM 393

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           + +   PD F  +SLL  CA+ +  ++GK++H  I   G+ +D     +L++MYAKCGS 
Sbjct: 394 EQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSP 453

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           ++A + F+++P+R ++SW+A I    +H  GKEA Q F QM  D V P+HIT +++L +C
Sbjct: 454 EEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSC 513

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
                + E   +      ++G+         +I + GR G   +A E+   +  + +   
Sbjct: 514 TSPEDL-ERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIR-RRDLGS 571

Query: 571 WGALLGA 577
           W A++ A
Sbjct: 572 WNAMIAA 578


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/683 (36%), Positives = 395/683 (57%), Gaps = 14/683 (2%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +++ C  +G     + +HG+ +K G   D+F A +LV++Y + GN +DA  +F ++   +
Sbjct: 84  LLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKN 143

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +V+W A+I G  L+     AL++F +M      P+ +T    L AC      +LG+Q+H 
Sbjct: 144 VVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHG 203

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK    S   +G  L  +Y K G+++     F  +P+KN+I W  +IS   ++    E
Sbjct: 204 YTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTE 263

Query: 282 AA-SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
              +LF  M +  V  ++ TL++V+    +   + + KQV     K    ++  + NS +
Sbjct: 264 LGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTM 323

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLE 389
             Y + G  E+A+++F+E     ++   +MI+ +AQ              G +ALK++ +
Sbjct: 324 YLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRD 383

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +    + PD F  SS+L+ C+ + A EQG+Q+H   IK GF+SD    ++LVNMY KCG 
Sbjct: 384 LVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+ A +AF E+P R +V+W++MI G +QHGR  +A+Q+F  M+  G  PN IT VS+L A
Sbjct: 444 IEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSA 503

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C++AGLV EA  +F+ M+ ++ I+P+ +HY CMID+  R G+  +A   +    F+ N +
Sbjct: 504 CSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEA 563

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W +L+   R + N+E+  +AA+ L  ++P+   T+VLL N+Y S G W +VA+VR+  K
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSK 623

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              L      SWI ++DKVY F   DRSH +S E+Y  L+ + +     GY P   T+L+
Sbjct: 624 HEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTELY 683

Query: 690 DVEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           D EE  K     L HHSE+LAVA GL+  PPG T+R+ KN+ +C DCH+S +F S + +R
Sbjct: 684 DSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLLANR 743

Query: 748 EIIVRDVNRFHHFRNGSCSCGGY 770
           EI+VRD  R H F++G CSCG +
Sbjct: 744 EIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/518 (31%), Positives = 261/518 (50%), Gaps = 36/518 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C     L     +HG +V TG   D FVA SLV +Y +CGN  D+R LFD +PE++
Sbjct: 84  LLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKN 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L + Y        A+  F EM+  G  P++++L  M++AC  S +  LG+++HG
Sbjct: 144 VVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHG 203

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE-HND 179
           Y+IK G  S     N+L  +Y K GNLE  +  FK I   ++++W  +I+ C   E + +
Sbjct: 204 YTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTE 263

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L LF  M   E+ PN FT TS +  C       LG+Q+     K+   ++  V    +
Sbjct: 264 LGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTM 323

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG------------HLQNGGDMEAASLFP 287
            +Y + G  +EA  +F  M + ++I WN +ISG            H ++ G  +A  +F 
Sbjct: 324 YLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRG-FQALKIFR 382

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            + R  +  D  T S++L   ++  A+   +Q+HA ++KT F SD  + ++L++ Y KCG
Sbjct: 383 DLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCG 442

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            +E A K F E     LV  TSMI+ Y+Q G   +A++L+ +M      P+     SLL+
Sbjct: 443 CIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLS 502

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL-------VNMYAKCGSIDDA-----DR 455
           AC+     E+  +       F  M + +    L       ++M+ + G +DDA      +
Sbjct: 503 ACSYAGLVEEAMRY------FDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRK 556

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F   P+  I  WS+++ G   HG  + A     ++LE
Sbjct: 557 GFE--PNEAI--WSSLVAGCRSHGNMELAFYAADRLLE 590



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 6/305 (1%)

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M +EG          +L       ++G  K +H   VKT    D ++  SL++ Y +CG+
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
            +DA  +F E    ++V  T++IT Y        AL++++EM      P  +    +L+A
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C      + GKQVH + IK+G  S T  GNSL  +Y K G+++   RAF  IPD+ +++W
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITW 248

Query: 469 SAMIGGLAQHGRGKE-ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           + MI   A+     E  L +F  ML+  V+PN  TL SV+  C    L        +   
Sbjct: 249 TTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCG-TSLDMNLGKQVQGFC 307

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV-WGALL-GAARIYKNVE 585
            K G           + +  R G+ +EAM L + M  + N+ + W A++ G A+I  + +
Sbjct: 308 FKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEM--EDNSVITWNAMISGFAQIMDSAK 365

Query: 586 VGQHA 590
              HA
Sbjct: 366 DDLHA 370


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/789 (34%), Positives = 419/789 (53%), Gaps = 72/789 (9%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCG--NFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+   ++ +GF  D F A+ L+    +    N   S ++F  I   +    N++   Y+ 
Sbjct: 44  QILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQ 103

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            +   +A+  +K M+ S +  + ++   +  +C+       G+ I  + +K+G+DSD++ 
Sbjct: 104 RNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYI 163

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            N L++MYA  GNL DA  VF      D+VSWN+++AG VL  + + A  ++ +M    +
Sbjct: 164 QNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNV 223

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
                                                  I    ++ ++ K G+++EA  
Sbjct: 224 ---------------------------------------IASNSMIVLFGKKGNVEEACK 244

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F+ M +K+L++W+ +IS + QN    EA  LF  M   G+  D+  + +VL + +    
Sbjct: 245 LFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLV 304

Query: 314 IGVCKQVHALSVKTAFES-------------------------------DDYIVNSLIDA 342
           +   K VH L VK   E+                               D    NS+I  
Sbjct: 305 VITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISG 364

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y KCG +E A  +F      D V+ ++MI+ YAQ     E L L+ EMQ     PD  + 
Sbjct: 365 YVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETIL 424

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            S+++AC +L+A +QGK +H +I K G   +   G +L+NMY K G ++DA   F  + +
Sbjct: 425 VSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE 484

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           +G+ +W+A+I GLA +G   ++L+ F +M E GV PN IT V+VL AC H GLV E   H
Sbjct: 485 KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRH 544

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           F SM ++  I P  +HY CM+D+LGRAG  +EA EL+++MP   + S WGALLGA + Y 
Sbjct: 545 FNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYG 604

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           + E G+     L  + P+    +VLLSNIYAS G W +V +VR  M+ + + K PG S I
Sbjct: 605 DNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMI 664

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E   +V+ F  GD++H +++ I   LDE++  L   GY P       D++E EKE  L+ 
Sbjct: 665 EAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFR 724

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFGLIA  P   IR+ KNLRIC DCHT+ + ISK  +REI+VRD +RFHHF+ 
Sbjct: 725 HSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQ 784

Query: 763 GSCSCGGYW 771
           GSCSC  YW
Sbjct: 785 GSCSCMDYW 793



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 139/578 (24%), Positives = 236/578 (40%), Gaps = 128/578 (22%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA----- 55
           + ++C+ +   F G  +   V+  GFDSD ++ N+L+ MYA CGN  D+R++FD      
Sbjct: 132 LFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLD 191

Query: 56  --------------------------IPERSV---------------------------- 61
                                     +PER+V                            
Sbjct: 192 MVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQ 251

Query: 62  ---VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              VSW++L SCY   +  EEA+  FKEM  +GI  +E  + S+++AC+     + G+ +
Sbjct: 252 KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLV 311

Query: 119 HGYSIKLGYDS-------------------------------DMFSANALVDMYAKVGNL 147
           HG  +K+G ++                               D  S N+++  Y K G +
Sbjct: 312 HGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEI 371

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           E A A+F  +   D VSW+A+I+G    +     L LFQ+M+     P+     S + AC
Sbjct: 372 EKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISAC 431

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
             +   + G+ +H  + K  +K + I+G  L++MY K G +++A  +F  + EK +  WN
Sbjct: 432 THLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWN 491

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   NG   ++   F  M   GV  ++ T   VL         G C+ +       
Sbjct: 492 ALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVL---------GACRHM------- 535

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
                      L+D   +  H    ++  K    +    C  M+    + G+ +EA +L 
Sbjct: 536 ----------GLVDEGHR--HFNSMIQEHKIGPNIKHYGC--MVDLLGRAGMLKEAEEL- 580

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             ++   + PD     +LL AC      E G+++   +++     D F    L N+YA  
Sbjct: 581 --IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGF-NVLLSNIYASK 637

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           G+  D       +   G+V  +     +  HGR  E L
Sbjct: 638 GNWVDVLEVRGMMRQHGVVK-TPGCSMIEAHGRVHEFL 674



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 167/432 (38%), Gaps = 100/432 (23%)

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG--HVEDAVKIFK 357
           TL  +   +   Q I    Q+ +  + + F  D +  + L+    +    ++  + +IF 
Sbjct: 25  TLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFS 84

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                +   C +M+  Y Q     +A+ +Y  M +  +  D++    L  +C+   A   
Sbjct: 85  HIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD 144

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF-------------------- 457
           GK +  H++K GF SD +  N+L+NMYA CG++ DA + F                    
Sbjct: 145 GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVL 204

Query: 458 -----------SEIPDRGI-------------------------------VSWSAMIGGL 475
                        +P+R +                               VSWSA+I   
Sbjct: 205 VGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCY 264

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--------------- 520
            Q+   +EAL +F +M  +G++ + + ++SVL AC+   +V   K               
Sbjct: 265 EQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYV 324

Query: 521 -------HHFESMEKKFGIQPMQEHYAC--------MIDILGRAGKFQEAMELVDTMPFQ 565
                  H + S E+    Q +     C        MI    + G+ ++A  L D+MP +
Sbjct: 325 NLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK 384

Query: 566 ANASVWGALL-GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM--WDNVA 622
            N S W A++ G A+  +  E      EM   IE  K    +L+S I A   +   D   
Sbjct: 385 DNVS-WSAMISGYAQQDRFTETLVLFQEM--QIEGTKPDETILVSVISACTHLAALDQGK 441

Query: 623 KVRRFMKDNKLK 634
            +  +++ N LK
Sbjct: 442 WIHAYIRKNGLK 453


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/693 (38%), Positives = 391/693 (56%), Gaps = 37/693 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++ H + I+ G  SD +SA+ L  + A     +LE A  VF +I  P+  +WN +I    
Sbjct: 48  KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107

Query: 174 LHEHNDWALKLFQQMKSSEIN--PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                  ++  F  M SSE    PN +T+   +KA A +    LG+ LH   IK  + SD
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             V   L+  Y  CG +D A  +F  + EK++++WN +I+G +Q G   +A  LF  M  
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           E V     T+  VL + A  + +   ++V +   +     +  + N+++D Y KCG +ED
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287

Query: 352 AVKIF---KESSAV----------------------------DLVACTSMITAYAQFGLG 380
           A ++F   +E   V                            D+VA  ++I+AY Q G  
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKP 347

Query: 381 EEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EAL ++ E+Q  + I  +     S L+ACA + A E G+ +H +I K G   + +  ++
Sbjct: 348 NEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSA 407

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+KCG ++ A   F+ +  R +  WSAMIGGLA HG G EA+ MF +M E  V PN
Sbjct: 408 LIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPN 467

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +T  +V CAC+H GLV EA+  F  ME  +GI P  +HYAC++D+LGR+G  ++A++ +
Sbjct: 468 GVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFI 527

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           + MP   + SVWGALLGA +I+ N+ + + A   L  +EP     HVLLSNIYA +G WD
Sbjct: 528 EAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWD 587

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           NV+++R+ M+   LKKEPG S IE+   ++ F  GD +H  S+++Y KL EV + L   G
Sbjct: 588 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 647

Query: 680 YVPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           Y P +   L  +EE E KEQ L  HSEKLA+ +GLI+T     IRV KNLR+C DCH   
Sbjct: 648 YEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVA 707

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + IS++ +REIIVRD  RFHHFRNG CSC  +W
Sbjct: 708 KLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 274/568 (48%), Gaps = 51/568 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           ++  C+S + L    Q H  ++ TG  SD + A+ L  + A     +   +R++FD IP+
Sbjct: 37  LIDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ 93

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR--PNEFSLSSMINACAGSGDSLLGR 116
            +  +WN+L   Y        ++  F +MV S  +  PN+++   +I A A      LG+
Sbjct: 94  PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 153

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HG +IK    SD+F AN+L+  Y   G+L+ A  VF  I+  D+VSWN++I G V   
Sbjct: 154 SLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 213

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVG 235
             D AL+LF++M+S ++  +  T    L ACA +   E GR++ CS I+   +  +  + 
Sbjct: 214 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRV-CSYIEENRVNVNLTLA 272

Query: 236 VGLVDMYAKCGSMDEARMIF-------------------------------HLMPEKNLI 264
             ++DMY KCGS+++A+ +F                               + MP+K+++
Sbjct: 273 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIV 332

Query: 265 AWNIVISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           AWN +IS + QNG   EA  +F     ++ +  +Q TL + L + A   A+ + + +H+ 
Sbjct: 333 AWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSY 392

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
             K   + + Y+ ++LI  Y KCG +E A ++F      D+   ++MI   A  G G EA
Sbjct: 393 IKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEA 452

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVN 442
           + ++ +MQ+  + P+    +++  AC++    ++ + +   +   +G + +      +V+
Sbjct: 453 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVD 512

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE-----DGV 496
           +  + G ++ A +    +P     S W A++G    H     A     ++LE     DG 
Sbjct: 513 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGA 572

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFE 524
              H+ L ++         V+E + H  
Sbjct: 573 ---HVLLSNIYAKSGKWDNVSELRKHMR 597


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/780 (35%), Positives = 434/780 (55%), Gaps = 38/780 (4%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D  +AN+L+V Y K G   ++ ++F  +   +VVS+ ++ S +   +   +A+  F  M 
Sbjct: 122 DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMR 181

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            SGI  NEFS  +++  C    D  LG ++H   IK+G+ +  F +NAL+ +Y K G L+
Sbjct: 182 SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD 241

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKAC 207
             + +F ++ H DI SWN VI+  V     + A +LF+ M+  +    + FT ++ L A 
Sbjct: 242 SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAA 301

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM------------------- 248
            G+    +GR++H  +IK+  +S+  V   L+  Y KCGS+                   
Sbjct: 302 RGLA-SMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWT 360

Query: 249 ------------DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                       D A  +F  MP +N I++N ++SG  QNG   +A + F  M  EGV  
Sbjct: 361 EMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVEL 420

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              TL+ VL +        + KQ+H   +K  F S+  I  +L+D   +CG + DA K+F
Sbjct: 421 TDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMF 480

Query: 357 KESSAVDL--VACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLS 413
            + S      +  TSMI  YA+    EEA+ L+ + Q +  +  D    +++L  C  L+
Sbjct: 481 SQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLA 540

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
            +E GKQ+H H +K GF+SD   GNS++ MY+KC ++DDA + F+ +P   IVSW+ +I 
Sbjct: 541 FHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIA 600

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH--AGLVAEAKHHFESMEKKFG 531
           G   H +G EAL ++ +M + G+ P+ +T V ++ A  H  + LV   +  F SM+  + 
Sbjct: 601 GHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYH 660

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P  EHY  ++ +LG  G  +EA E+++ MP +  ASVW ALL A RI+ N  +G+ AA
Sbjct: 661 IDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAA 720

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           + L A++P   ST++L+SN+Y++ G W     VR  M+    +K PG SWI  ++KV++F
Sbjct: 721 KHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSF 780

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
              D+SH ++K+I++ L+ +     KAGYVP     LH+VEE +K+  L++HS K+A  +
Sbjct: 781 YARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATY 840

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GL+ T PG  IR+ KN+ +C DCHT  +++S +  REI +RD +  H F NG CSC  YW
Sbjct: 841 GLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 258/534 (48%), Gaps = 59/534 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C    DL LG Q+H IV+  GF +  FV+N+L+ +Y KCG      +LFD +P R 
Sbjct: 195 ILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRD 254

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + SWN++ S  V     E A   F++M  + G R + F+LS+++ A  G   S++GR+IH
Sbjct: 255 IASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA-SMVGREIH 313

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSW-------------- 165
            + IK+G++S++   NAL+  Y K G+++  VA+F+ +   D+++W              
Sbjct: 314 AHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTD 373

Query: 166 -----------------NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
                            NA+++G   +     AL  F +M    +    FT T  L AC 
Sbjct: 374 LALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACG 433

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI--FHLMPEKNLIAW 266
            +   ++ +Q+H  ++K    S+  +   L+DM  +CG M +A+ +       +   I W
Sbjct: 434 LLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIW 493

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC--------- 317
             +I G+ +N    EA SLF     EG        + V+  VAS   +GVC         
Sbjct: 494 TSMICGYARNAQPEEAISLFCQSQLEG--------AMVVDKVASTAVLGVCGTLAFHEMG 545

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ+H  ++K+ F SD  + NS+I  Y KC +++DA+K+F    A D+V+   +I  +   
Sbjct: 546 KQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLH 605

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G+EAL ++ +M+   I PD+     +++A    N +  +  +++ + +     +  T 
Sbjct: 606 RQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTV 665

Query: 436 AG-NSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEA 484
               SLV +    G +++A+   +++P     S W A++     H     GK A
Sbjct: 666 EHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRA 719



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 4/173 (2%)

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           LL+        E  K VH  I K     D    N+L+  Y K G + +A + F  +    
Sbjct: 96  LLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 153

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VS++AMI G A+  R ++A+++F +M   G+  N  + V++L  C    L  E      
Sbjct: 154 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRL-LDLELGCQLH 212

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           ++  K G          ++ + G+ G     ++L D MP +  AS W  ++ +
Sbjct: 213 AIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIAS-WNTVISS 264


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/709 (36%), Positives = 391/709 (55%), Gaps = 68/709 (9%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW-ALKLFQQM 188
           + F+ N+L+ MYAK G L DA  VF  +   D VSW  ++ G +      W A+K F  M
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVG-LNRAGRFWDAVKTFLDM 154

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
               + P+ F  T+ L +CA  E + +GR++H  +IK+ + S   V   ++ MY KCG  
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214

Query: 249 DEARMIFHLMP-------------------------------EKNLIAWNIVISGHLQNG 277
           + AR +F  M                                E+++++WN +I+G+ QNG
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274

Query: 278 GDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
            D  A   F  M     +  D+ T+++VL + A+ + + + KQ+H+  ++T       I+
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDL-------------------------------- 364
           N+LI  Y K G VE A +I  ++   DL                                
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394

Query: 365 -VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
            +A T+MI  Y Q G  +EA++L+  M      P+S   +++L+ACA+L+    GKQ+H 
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHC 454

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGK 482
             I+          N+++ +YA+ GS+  A R F +I  R   V+W++MI  LAQHG G+
Sbjct: 455 RAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGE 514

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           +A+ +F +ML  GV P+ +T + V  AC HAG + + K ++E M  + GI P   HYACM
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           +D+L RAG   EA E +  MP   +  VWG+LL A R+ KN ++ + AAE L +I+P+ S
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
             +  L+N+Y++ G W++ A++ +  KD  +KKE G SW  V+ KV+ F   D  H +  
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD 694

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
            I  K  E+ + + KAG+VP + + LHDV++  KE+LL  HSEKLA+AFGLI+TP   T+
Sbjct: 695 AICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 754

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+ KNLR+C DCHT+ +FISK+V REIIVRD  RFHHFR+G CSC  YW
Sbjct: 755 RIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 252/514 (49%), Gaps = 68/514 (13%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           + F  NSL+ MYAK G   D+R +F  +PER  VSW  +           +AV  F +MV
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G+ P++F L++++++CA +    +GRK+H + IKLG  S +  AN+++ MY K G+ E
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215

Query: 149 DAVAVFK-------------------------------DIEHPDIVSWNAVIAGCVLHEH 177
            A AVF+                               ++E   IVSWNA+IAG   +  
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275

Query: 178 NDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           +D ALK F +M  +S + P+ FT TS L ACA + + ++G+Q+H  +++  +     +  
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335

Query: 237 GLVDMYAKCGSMDEARMI---------------------------------FHLMPEKNL 263
            L+  YAK GS++ AR I                                 F +M  +++
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           IAW  +I G+ QNG + EA  LF  M R G   +  TL+ VL + AS   +G  KQ+H  
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEE 382
           ++++  E    + N++I  Y + G V  A ++F +     + V  TSMI A AQ GLGE+
Sbjct: 456 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQ 515

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLV 441
           A+ L+ EM    + PD      + +AC +    ++GK+ +  ++ + G + +      +V
Sbjct: 516 AIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMV 575

Query: 442 NMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           ++ A+ G + +A      +P     V W +++  
Sbjct: 576 DLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 230/536 (42%), Gaps = 110/536 (20%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C + +   +G +VH  V+  G  S   VANS++ MY KCG+   +R +F+ +  RS
Sbjct: 169 VLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRS 228

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM--------------------------------V 88
             SWN++ S Y H   ++ A+  F+ M                                 
Sbjct: 229 ESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLT 288

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY--------------------- 127
            S + P+EF+++S+++ACA      +G+++H Y ++ G                      
Sbjct: 289 ASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVE 348

Query: 128 ------------DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                       D ++ S  AL++ Y K+G+ + A  VF  + + D+++W A+I G   +
Sbjct: 349 TARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQN 408

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             ND A++LF+ M  S   PN  T  + L ACA +     G+Q+HC  I+   +    V 
Sbjct: 409 GQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVS 468

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             ++ +YA+ GS+  AR +F  +   K  + W  +I    Q+G   +A  LF  M R GV
Sbjct: 469 NAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGV 528

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T   V  +      I   K+ +                 +++ +G          
Sbjct: 529 KPDRVTYIGVFSACTHAGFIDKGKRYY---------------EQMLNEHG---------- 563

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC----- 409
           I  E S     AC  M+   A+ GL  EA +    +Q   + PD+ V  SLL AC     
Sbjct: 564 IVPEMSH---YAC--MVDLLARAGLLTEAHEF---IQRMPVAPDTVVWGSLLAACRVRKN 615

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           A+L+     K + +     G      A ++L N+Y+ CG  +DA R +    D+ +
Sbjct: 616 ADLAELAAEKLLSIDPDNSG------AYSALANVYSACGRWNDAARIWKLRKDKAV 665



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 43/197 (21%)

Query: 418 GKQVHVHIIKFGFM-------------------------------------SDTFAGNSL 440
           G+ +H H +K G +                                      + F  NSL
Sbjct: 44  GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++MYAK G + DA   F+++P+R  VSW+ M+ GL + GR  +A++ F  M+ +G+ P+ 
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163

Query: 501 ITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
             L +VL  CA   A  +    H F     K G+         ++ + G+ G  + A  +
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVI---KLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 559 VDTMPFQANASVWGALL 575
            + M  ++ +S W A++
Sbjct: 221 FERMKVRSESS-WNAMV 236


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/663 (38%), Positives = 382/663 (57%), Gaps = 48/663 (7%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVG-----NLEDAVAVFKDIEHPDIVSWNAVIA 170
           ++ H   ++ G+  D + A +LV  YA V      + E ++ VF  +  P++  WN +I 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
            C+ +     A+ L+ +M  +   PN +TY + LKAC+   +   G Q+H  L+K  +  
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
           D  +    + MYA  G + EAR I      E + + WN +I G+L+ G    A  LF  M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
                  D++ +ST                                 N++I  + +CG V
Sbjct: 231 P------DRSMISTW--------------------------------NAMISGFSRCGMV 252

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           E A + F E    D ++ ++MI  Y Q G   EAL+++ +MQ  +I P  FV  S+L+AC
Sbjct: 253 EVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 312

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           ANL A +QG+ +H +  +     D   G SLV+MYAKCG ID A   F ++ ++ + SW+
Sbjct: 313 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 372

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMIGGLA HGR ++A+ +F +M    + PN IT V VL AC H GLV +    F SM K+
Sbjct: 373 AMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 429

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           +G++P  EHY C++D+LGRAG   EA ++V ++P +   +VWGALLGA R + NVE+G+ 
Sbjct: 430 YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER 489

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEV-KDKV 648
             ++L  +EP+ S  + LLSNIYA AG W+ V +VR+ MK+  +K  PG S I++ + +V
Sbjct: 490 VGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEV 549

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F +GD SH + K+IY  LD+V + L   GY P     L D++E EKE  ++ HSEKLA
Sbjct: 550 HKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLA 609

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           + FGLI T PG TIR+ KNLR+C DCH++ + IS++ +REIIVRD  R+HHFRNG+CSC 
Sbjct: 610 IGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCK 669

Query: 769 GYW 771
            +W
Sbjct: 670 DFW 672



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 224/521 (42%), Gaps = 110/521 (21%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCG-----NFIDSRRLFDAIPERSVVSWNSLFSC 70
           Q H +++ TG   D ++A SLV  YA        +F  S R+FD + + +V  WN +   
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 111

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYD 128
            +  +   +A+  + EM+++  RPN+++  +++ AC+ +G    G ++H + +K  LG D
Sbjct: 112 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 171

Query: 129 SDMFSA------------------------------NALVDMYAKVGNLEDAVAVFKDIE 158
             + S+                              NA++D Y + G +E A  +F+ + 
Sbjct: 172 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM- 230

Query: 159 HPD---IVSWNAVIAG---C----VLHEHND---------W---------------ALKL 184
            PD   I +WNA+I+G   C    V  E  D         W               AL++
Sbjct: 231 -PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 289

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F QM+  +I P  F   S L ACA +   + GR +H    +  I+ D ++G  LVDMYAK
Sbjct: 290 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 349

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CG +D A  +F  M  K + +WN +I G   +G   +A  LF  M    +  ++ T   V
Sbjct: 350 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGV 406

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           L + A           H   V+        I NS+   YG    VE  ++ +     VDL
Sbjct: 407 LNACA-----------HGGLVQKGLT----IFNSMRKEYG----VEPQIEHY--GCIVDL 445

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           +    ++T         EA K+   +      P   V  +LL AC      E G++V   
Sbjct: 446 LGRAGLLT---------EAEKVVSSIP---TEPTPAVWGALLGACRKHGNVELGERVGKI 493

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +++     ++     L N+YAK G  ++       + +RGI
Sbjct: 494 LLELE-PQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI 533



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 156/347 (44%), Gaps = 70/347 (20%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           VLKAC+    +  G+QVH  +V  G   D  + +S + MYA  G  +++RR         
Sbjct: 143 VLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 202

Query: 52  -----------------------LFDAIPERSVVS-WNSLFSCYVHCDFLEEAVCFFKEM 87
                                  LF+ +P+RS++S WN++ S +  C  +E A  FF EM
Sbjct: 203 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 262

Query: 88  ----------VLSG---------------------IRPNEFSLSSMINACAGSGDSLLGR 116
                     ++ G                     IRP +F L S+++ACA  G    GR
Sbjct: 263 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 322

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            IH Y+ +     D     +LVDMYAK G ++ A  VF+ + + ++ SWNA+I G  +H 
Sbjct: 323 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 382

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + A+ LF +M   +INPN  T+   L ACA   L + G  +  S+ K       I   
Sbjct: 383 RAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHY 439

Query: 237 G-LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
           G +VD+  + G + EA  +   +P E     W  ++ G  +  G++E
Sbjct: 440 GCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL-GACRKHGNVE 485



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 142/352 (40%), Gaps = 48/352 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L  G  +H          D  +  SLV MYAKCG    +  +F+ +  + 
Sbjct: 308 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKE 367

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           V SWN++          E+A+  F +M    I PNE +   ++NACA  G    G  I +
Sbjct: 368 VSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFN 424

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH--- 175
               + G +  +     +VD+  + G L +A  V   I   P    W A++  C  H   
Sbjct: 425 SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 484

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP--- 232
           E  +   K+  +++    N   +T  S + A AG   +E+G ++   + +  IK+ P   
Sbjct: 485 ELGERVGKILLELEPQ--NSGRYTLLSNIYAKAG-RWEEVG-EVRKLMKERGIKTTPGTS 540

Query: 233 ------------IVGVG----LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
                       I+G G    + D+Y     + E   +    P+ + + ++I        
Sbjct: 541 IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDI-------- 592

Query: 277 GGDMEAASLFPWMYRE----GVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
             D E      W + E    G G   T+  T ++ V + +   VC+  H+ +
Sbjct: 593 --DEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLR---VCEDCHSAT 639


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/692 (37%), Positives = 397/692 (57%), Gaps = 36/692 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L++   +      L  A++VF  I+ P ++ WN +  G 
Sbjct: 19  RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      ALKL+  M S  + PN +T+   LK+CA     + G+QLH  ++K     D 
Sbjct: 79  ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138

Query: 233 IVGVGLVDMYAKCGSMDEARMI-------------------------------FHLMPEK 261
            +   L+ MY + G +++A+ +                               F  +P K
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++++WN  ISG+ + G   EA  LF  M +  V  D++T+ TVL + A   +I + +QVH
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           +      F  +  IVN+LID Y KCG +E A  +F+  S  D+++  ++I  Y    L +
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
           EAL L+ +M      P+     S+L+ACA+L A + G+ +HV+I K   G  + +    S
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MYAKCG I+ A + F  + +R + SW+AMI G A HGR   A  +F +M ++G+ P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V +L AC+H+G++   +H F SM + + + P  EHY CMID+ G +G F+EA +++
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMI 498

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           +TM  + +  +W +LL A +++ NVE+G+  A+ L  IEPE   ++VLLSNIYA+A  W+
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWN 558

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
            VAK R  + D  +KK PG S IE+   V+ F +GD+ H R++EIY  L+E+  LL +AG
Sbjct: 559 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP     L ++EE  KE  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH + +
Sbjct: 619 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ISKI  REII RD  RFHHFR+G CSC  YW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 230/502 (45%), Gaps = 75/502 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK+C        G Q+HG V+  GFD D ++  SL+ MY + G   D+++         
Sbjct: 109 LLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD 168

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 +FD IP + VVSWN+  S Y      +EA+  FK+M+ 
Sbjct: 169 VVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK 228

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + +RP+E ++ ++++ACA SG   LGR++H +    G+  ++   NAL+D+Y+K G LE 
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ M  S   PN  T  S L ACA 
Sbjct: 289 ACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAH 348

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K    + +   +   L+DMYAKCG ++ A+ +F  M  ++L +WN
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    A  +F  M + G+  D  T   +L + +    + + + +     + 
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR- 467

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
                DY +   ++ YG                         MI      GL +EA K+ 
Sbjct: 468 -----DYKLMPKLEHYG------------------------CMIDLXGHSGLFKEAEKMI 498

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK--------FGFMSDTFAGNS 439
             M   E+ PD  +  SLL AC      E G+    ++IK        +  +S+ +A   
Sbjct: 499 NTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAE 555

Query: 440 LVNMYAKCGSIDDADRAFSEIP 461
             N  AK  ++ + D+   ++P
Sbjct: 556 RWNEVAKTRALLN-DKGMKKVP 576



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 235/518 (45%), Gaps = 43/518 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLV---VMYAKCGNFIDSRRLFDAIP 57
           +L  C + + L +   +H  ++ TG  +  +  + L+   V+         +  +FD I 
Sbjct: 8   LLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ 64

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E  ++ WN++F  +        A+  +  MV  G+ PN ++   ++ +CA S     G++
Sbjct: 65  EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV------------------------ 153
           +HG  +K G+D D++   +L+ MY + G LEDA  V                        
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184

Query: 154 -------FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                  F +I   D+VSWNA I+G     +   AL+LF++M  + + P+  T  + L A
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     ELGRQ+H  +       +  +   L+D+Y+KCG ++ A  +F  +  K++I+W
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G+       EA  LF  M R G   +  T+ ++L + A   AI + + +H    K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364

Query: 327 --TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
                 +   +  SLID Y KCG +E A ++F       L +  +MI  +A  G    A 
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNM 443
            ++  M+   I PD      LL+AC++    + G+ +   + + +  M        ++++
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDL 484

Query: 444 YAKCGSIDDADRAFS--EIPDRGIVSWSAMIGGLAQHG 479
               G   +A++  +  E+   G++ W +++     HG
Sbjct: 485 XGHSGLFKEAEKMINTMEMEPDGVI-WCSLLKACKMHG 521


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/717 (35%), Positives = 412/717 (57%), Gaps = 2/717 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K L  G +VH I+   G   DE +   LV MY  CG+ +  RR+FD I    
Sbjct: 63  VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDK 122

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN L S Y       E+V  F++M   GIR + ++ + ++   A S      +++HG
Sbjct: 123 IFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHG 182

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +KLG+ S     N+L+  Y K G +E A  +F ++   D+VSWN++I+GC ++  +  
Sbjct: 183 YVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRN 242

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+ F QM +  ++ +  T  + L ACA +    LGR LH   +K       +    L+D
Sbjct: 243 GLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLD 302

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG+++ A  +F  M E  +++W  +I+ H++ G   EA  LF  M  +G+  D   
Sbjct: 303 MYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYA 362

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++V+ + A   ++   ++VH    K    S+  + N+L++ Y KCG +E+A  IF +  
Sbjct: 363 VTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLP 422

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             ++V+  +MI  Y+Q  L  EAL+L+L+MQ +++ PD    + +L ACA L+A E+G++
Sbjct: 423 VKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGRE 481

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H HI++ G+ SD     +LV+MY KCG +  A + F  IP + ++ W+ MI G   HG 
Sbjct: 482 IHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGF 541

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEA+  F +M   G+ P   +  S+L AC H+GL+ E    F+SM+ +  I+P  EHYA
Sbjct: 542 GKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYA 601

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+L R+G    A + ++TMP + +A++WGALL   RI+ +VE+ +  AE +F +EPE
Sbjct: 602 CMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPE 661

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +VLL+N+YA A  W+ V K++R +    LK + G SWIEV+ K   F  GD SH +
Sbjct: 662 NTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQ 721

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           +K I + L +++  +N+ GY   ++  L + ++  KE LL  HSEKLA+   + ATP
Sbjct: 722 AKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM-LQVDATP 777



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 278/545 (51%), Gaps = 24/545 (4%)

Query: 81  VCFFKEM--------VLSGIRPNEFSLS---SMINACAGSGDSLLGRKIHGYSIKLGYDS 129
           +C F EM        +LS  + +E  L+   S++  CA       G+++H      G   
Sbjct: 31  ICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAI 90

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D      LV MY   G+L     +F  I +  I  WN +++      +   ++ LF++M+
Sbjct: 91  DEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQ 150

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              I  + +T+T  LK  A        +++H  ++K+   S   V   L+  Y KCG ++
Sbjct: 151 ELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVE 210

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR++F  + ++++++WN +ISG   NG        F  M   GV  D  TL  VL + A
Sbjct: 211 SARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACA 270

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +   + + + +HA  VK  F       N+L+D Y KCG++  A ++F +     +V+ TS
Sbjct: 271 NVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTS 330

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I A+ + GL  EA+ L+ EMQ + + PD +  +S+++ACA  ++ ++G++VH HI K  
Sbjct: 331 IIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNN 390

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
             S+    N+L+NMYAKCGS+++A+  FS++P + IVSW+ MIGG +Q+    EALQ+F 
Sbjct: 391 MGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFL 450

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH---HFESMEKKFGIQPMQEHYAC-MIDI 545
            M +  + P+ +T+  VL AC  AGL A  K    H   + K +       H AC ++D+
Sbjct: 451 DM-QKQLKPDDVTMACVLPAC--AGLAALEKGREIHGHILRKGY---FSDLHVACALVDM 504

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARI--YKNVEVGQHAAEMLFAIEPEKSS 603
             + G    A +L D +P + +  +W  ++    +  +    +       +  IEPE+SS
Sbjct: 505 YVKCGLLVLAQQLFDMIP-KKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESS 563

Query: 604 THVLL 608
              +L
Sbjct: 564 FTSIL 568



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 235/472 (49%), Gaps = 17/472 (3%)

Query: 152 AVFKDIEHPDI-VSWNAVIAGCVLHEHNDW--ALKLFQQMKSSEINPNMFTYTSALKACA 208
           A   +  H ++ V  NA I  C   E  D   A+KL  + + SE+  N  TY S L+ CA
Sbjct: 13  ATLSETTHNNVTVDKNAKI--CKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCA 68

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            ++  E G+++H  +    +  D ++G  LV MY  CG + + R IF  +    +  WN+
Sbjct: 69  ELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNL 128

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           ++S + + G   E+  LF  M   G+  D  T + VLK  A+   +  CK+VH   +K  
Sbjct: 129 LMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLG 188

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
           F S + +VNSLI AY KCG VE A  +F E S  D+V+  SMI+     G     L+ ++
Sbjct: 189 FGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFI 248

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M +  ++ DS    ++L ACAN+     G+ +H + +K GF       N+L++MY+KCG
Sbjct: 249 QMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCG 308

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL- 507
           +++ A+  F ++ +  IVSW+++I    + G   EA+ +F +M   G+ P+   + SV+ 
Sbjct: 309 NLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVH 368

Query: 508 -CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
            CAC+++       H+           P+      ++++  + G  +EA  +   +P + 
Sbjct: 369 ACACSNSLDKGREVHNHIKKNNMGSNLPVSN---ALMNMYAKCGSMEEANLIFSQLPVK- 424

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY-ASAGM 617
           N   W  ++G    Y    +   A ++   ++ +     V ++ +  A AG+
Sbjct: 425 NIVSWNTMIGG---YSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGL 473


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/663 (38%), Positives = 382/663 (57%), Gaps = 48/663 (7%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVG-----NLEDAVAVFKDIEHPDIVSWNAVIA 170
           ++ H   ++ G+  D + A +LV  YA V      + E ++ VF  +  P++  WN +I 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
            C+ +     A+ L+ +M  +   PN +TY + LKAC+   +   G Q+H  L+K  +  
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
           D  +    + MYA  G + EAR I      E + + WN +I G+L+ G    A  LF  M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
                  D++ +ST                                 N++I  + +CG V
Sbjct: 232 P------DRSMISTW--------------------------------NAMISGFSRCGMV 253

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           E A + F E    D ++ ++MI  Y Q G   EAL+++ +MQ  +I P  FV  S+L+AC
Sbjct: 254 EVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 313

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           ANL A +QG+ +H +  +     D   G SLV+MYAKCG ID A   F ++ ++ + SW+
Sbjct: 314 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 373

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMIGGLA HGR ++A+ +F +M    + PN IT V VL AC H GLV +    F SM K+
Sbjct: 374 AMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 430

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           +G++P  EHY C++D+LGRAG   EA ++V ++P +   +VWGALLGA R + NVE+G+ 
Sbjct: 431 YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER 490

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEV-KDKV 648
             ++L  +EP+ S  + LLSNIYA AG W+ V +VR+ MK+  +K  PG S I++ + +V
Sbjct: 491 VGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEV 550

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F +GD SH + K+IY  LD+V + L   GY P     L D++E EKE  ++ HSEKLA
Sbjct: 551 HKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLA 610

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           + FGLI T PG TIR+ KNLR+C DCH++ + IS++ +REIIVRD  R+HHFRNG+CSC 
Sbjct: 611 IGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCK 670

Query: 769 GYW 771
            +W
Sbjct: 671 DFW 673



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 224/521 (42%), Gaps = 110/521 (21%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCG-----NFIDSRRLFDAIPERSVVSWNSLFSC 70
           Q H +++ TG   D ++A SLV  YA        +F  S R+FD + + +V  WN +   
Sbjct: 53  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 112

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK--LGYD 128
            +  +   +A+  + EMV++  RPN+++  +++ AC+ SG    G ++H + +K  LG D
Sbjct: 113 CIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGD 172

Query: 129 SDMFSA------------------------------NALVDMYAKVGNLEDAVAVFKDIE 158
             + S+                              NA++D Y + G +E A  +F+ + 
Sbjct: 173 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM- 231

Query: 159 HPD---IVSWNAVIAG---C----VLHEHND---------W---------------ALKL 184
            PD   I +WNA+I+G   C    V  E  D         W               AL++
Sbjct: 232 -PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 290

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F QM+  +I P  F   S L ACA +   + GR +H    +  I+ D ++G  LVDMYAK
Sbjct: 291 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 350

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CG +D A  +F  M  K + +WN +I G   +G   +A  LF  M    +  ++ T   V
Sbjct: 351 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGV 407

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           L + A           H   V+        I NS+   YG    VE  ++ +     VDL
Sbjct: 408 LNACA-----------HGGLVQKGLT----IFNSMRKEYG----VEPQIEHY--GCIVDL 446

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           +    ++T         EA K+   +      P   V  +LL AC      E G++V   
Sbjct: 447 LGRAGLLT---------EAEKVVSSIP---TEPTPAVWGALLGACRKHGNVELGERVGKI 494

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +++     ++     L N+YAK G  ++       + +RGI
Sbjct: 495 LLELE-PQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI 534



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 70/347 (20%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           VLKAC+    +  G+QVH  +V  G   D  + +S + MYA  G  +++RR         
Sbjct: 144 VLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 203

Query: 52  -----------------------LFDAIPERSVVS-WNSLFSCYVHCDFLEEAVCFFKEM 87
                                  LF+ +P+RS++S WN++ S +  C  +E A  FF EM
Sbjct: 204 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 263

Query: 88  ----------VLSG---------------------IRPNEFSLSSMINACAGSGDSLLGR 116
                     ++ G                     IRP +F L S+++ACA  G    GR
Sbjct: 264 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 323

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            IH Y+ +     D     +LVDMYAK G ++ A  VF+ + + ++ SWNA+I G  +H 
Sbjct: 324 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 383

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + A+ LF +M   +I PN  T+   L ACA   L + G  +  S+ K       I   
Sbjct: 384 RAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHY 440

Query: 237 G-LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
           G +VD+  + G + EA  +   +P E     W  ++ G  +  G++E
Sbjct: 441 GCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL-GACRKHGNVE 486



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 142/352 (40%), Gaps = 48/352 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L  G  +H          D  +  SLV MYAKCG    +  +F+ +  + 
Sbjct: 309 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKE 368

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           V SWN++          E+A+  F +M    I PNE +   ++NACA  G    G  I +
Sbjct: 369 VSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFN 425

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH--- 175
               + G +  +     +VD+  + G L +A  V   I   P    W A++  C  H   
Sbjct: 426 SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 485

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP--- 232
           E  +   K+  +++    N   +T  S + A AG   +E+G ++   + +  IK+ P   
Sbjct: 486 ELGERVGKILLELEPQ--NSGRYTLLSNIYAKAG-RWEEVG-EVRKLMKERGIKTTPGTS 541

Query: 233 ------------IVGVG----LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
                       I+G G    + D+Y     + E   +    P+ + + ++I        
Sbjct: 542 IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDI-------- 593

Query: 277 GGDMEAASLFPWMYRE----GVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
             D E      W + E    G G   T+  T ++ V + +   VC+  H+ +
Sbjct: 594 --DEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLR---VCEDCHSAT 640


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/661 (40%), Positives = 391/661 (59%), Gaps = 15/661 (2%)

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           S  L    ++FS N L++ YAK   +  A  VF +I  PDIVS+N +IA          A
Sbjct: 66  SFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPA 125

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+LF +++      + FT +  + AC   +   L RQLHC ++         V   ++  
Sbjct: 126 LRLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLAC 183

Query: 242 YAKCGSMDEARMIFHLMPE---KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           Y++ G ++EAR +F  M E   ++ ++WN +I    Q+   +EA  LF  M R G+  D 
Sbjct: 184 YSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDM 243

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC-GHVEDAVKIFK 357
            T+++VL +    + +    Q H + +K+ F  + ++ + LID Y KC G + +  K+F+
Sbjct: 244 FTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFE 303

Query: 358 ESSAVDLVACTSMITAYAQF-GLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSA 414
           E +A DLV   +MI+ ++Q+  L E+ +  + EMQ    +PD  SFVC +  +AC+NLS+
Sbjct: 304 EIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVT--SACSNLSS 361

Query: 415 YEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
              GKQVH   IK     +  +  N+LV MY+KCG++ DA R F  +P+  +VS ++MI 
Sbjct: 362 PSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIA 421

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G AQHG   E+L++F  ML+  + PN IT ++VL AC H G V E + +F  M+++F I+
Sbjct: 422 GYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIE 481

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY+CMID+LGRAGK +EA  +++TMPF   +  W  LLGA R + NVE+   AA  
Sbjct: 482 PEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANE 541

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
              +EP  ++ +V+LSN+YASA  W+  A V+R M++  +KK+PG SWIE+  KV+ F  
Sbjct: 542 FLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVA 601

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL---HDVEESEKEQLLYHHSEKLAVA 710
            D SH   KEI+  + E+   + +AGYVP +   L    +VE  EKE+ L +HSEKLAVA
Sbjct: 602 EDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVA 661

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGLI+T     I V KNLRIC DCH + + IS I  REI VRD +RFH F+ G CSCG Y
Sbjct: 662 FGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDY 721

Query: 771 W 771
           W
Sbjct: 722 W 722



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 271/537 (50%), Gaps = 51/537 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID------------ 48
           +LKAC +++DL  G  +H +   +      +++N   ++Y+KCG+  +            
Sbjct: 15  LLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPN 74

Query: 49  -------------------SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                              +R++FD IP+  +VS+N+L + Y        A+  F E+  
Sbjct: 75  VFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRE 134

Query: 90  SGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                + F+LS +I AC   GD + L R++H + +  GYD      NA++  Y++ G L 
Sbjct: 135 LRFGLDGFTLSGVIIAC---GDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191

Query: 149 DAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +A  VF+++      D VSWNA+I  C  H     A++LF++M    +  +MFT  S L 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLI 264
           A   ++    G Q H  +IK     +  VG GL+D+Y+KC G M E R +F  +   +L+
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLV 311

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYRE----GVGFDQTTLSTVLKSVASFQAIGVCKQV 320
            WN +ISG  Q   D+    +  W +RE    G   D  +   V  + ++  +  V KQV
Sbjct: 312 LWNTMISGFSQY-EDLSEDGI--WCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368

Query: 321 HALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           HAL++K+    +   V N+L+  Y KCG+V DA ++F      ++V+  SMI  YAQ G+
Sbjct: 369 HALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGV 428

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-- 437
             E+L+L+  M  ++I P++    ++L+AC +    E+G Q + +++K  F  +  A   
Sbjct: 429 EVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEAEHY 487

Query: 438 NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           + ++++  + G + +A+R    +P + G + W+ ++G   +HG  + A++   + L+
Sbjct: 488 SCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQ 544



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 187/418 (44%), Gaps = 40/418 (9%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE-------- 250
           T+ + LKAC        G+ LH    K  I     +      +Y+KCGS+          
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 251 -----------------------ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                                  AR +F  +P+ +++++N +I+ +   G    A  LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            +     G D  TLS V+  +A    +G+ +Q+H   V   ++    + N+++  Y + G
Sbjct: 131 EVRELRFGLDGFTLSGVI--IACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 348 HVEDAVKIFK---ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
            + +A ++F+   E    D V+  +MI A  Q   G EA++L+ EM  R +  D F  +S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-GSIDDADRAFSEIPDR 463
           +L A   +     G Q H  +IK GF  ++  G+ L+++Y+KC G + +  + F EI   
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308

Query: 464 GIVSWSAMIGGLAQH-GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
            +V W+ MI G +Q+    ++ +  F +M  +G  P+  + V V  AC++    +  K  
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           H  +++       +  + A ++ +  + G   +A  + DTMP     S+   + G A+
Sbjct: 369 HALAIKSDIPYNRVSVNNA-LVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQ 425



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 126/246 (51%), Gaps = 19/246 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V  AC++     +G QVH + + +    +   V N+LV MY+KCGN  D+RR+FD +PE 
Sbjct: 352 VTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEH 411

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++VS NS+ + Y       E++  F+ M+   I PN  +  ++++AC  +G    G+K  
Sbjct: 412 NMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYF 471

Query: 120 GY---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
                  ++  +++ +S   ++D+  + G L++A  + + +  +P  + W  ++  C  H
Sbjct: 472 NMMKERFRIEPEAEHYS--CMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529

Query: 176 EHNDWALKL---FQQMKSSEINP-----NMFTYTSALKACAGME--LKELG--RQLHCSL 223
            + + A+K    F Q++     P     NM+   +  +  A ++  ++E G  ++  CS 
Sbjct: 530 GNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSW 589

Query: 224 IKMEIK 229
           I+++ K
Sbjct: 590 IEIDKK 595


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/585 (41%), Positives = 370/585 (63%), Gaps = 3/585 (0%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           ++ S I  +   Y + LK C   +L   GR +H  LI+   + D ++   L++MYAKCGS
Sbjct: 42  LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           ++EAR +F  MPE++ + W  +ISG+ Q+    +A  LF  M R G   ++ TLS+V+K+
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161

Query: 308 VASFQAIGVC-KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            A+ +  G C  Q+H   VK  F+S+ ++ ++L+D Y + G ++DA  +F    + + V+
Sbjct: 162 AAA-ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 220

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             ++I  +A+    E+AL+L+  M      P  F  +SL  AC++    EQGK VH ++I
Sbjct: 221 WNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 280

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G     FAGN+L++MYAK GSI DA + F  +  R +VSW++++   AQHG G EA+ 
Sbjct: 281 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVC 340

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
            F +M   G+ PN I+ +SVL AC+H+GL+ E  H++E M KK GI     HY  ++D+L
Sbjct: 341 WFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVLEAWHYVTIVDLL 399

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG    A+  ++ MP +  A++W ALL A R++KN E+G +AAE +F ++P+    HV
Sbjct: 400 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 459

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           +L NIYAS G W++ A+VR+ MK++ +KKEP  SW+E+++ ++ F   D  H + +EI  
Sbjct: 460 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 519

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           K +EV   + + GYVP     +  V++ E+E  L +HSEK+A+AF L+ TPPG+TI +KK
Sbjct: 520 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 579

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           N+R+C DCH++ +  SK V REIIVRD NRFHHF++G+CSC  YW
Sbjct: 580 NIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 260/558 (46%), Gaps = 59/558 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK CT  K L  G  VHG ++ + F  D  + N+L+ MYAKCG+  ++R++FD +PER 
Sbjct: 57  LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W +L S Y   D   +A+  F +M+  G  PNEF+LSS+I A A       G ++HG
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G+DS++   +AL+D+Y + G ++DA  VF  +E  + VSWNA+IAG       + 
Sbjct: 177 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEK 236

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ M      P+ F+Y S   AC+     E G+ +H  +IK   K     G  L+D
Sbjct: 237 ALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 296

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+ +AR IF  + ++++++WN +++ + Q+G   EA   F  M R G+  ++ +
Sbjct: 297 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEIS 356

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +    +      + L  K     + +   +++D  G+ G +  A++  +E  
Sbjct: 357 FLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMP 416

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                                             I P + +  +LLNAC      E G  
Sbjct: 417 ----------------------------------IEPTAAIWKALLNACRMHKNTELGAY 442

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGL 475
              H+ +     D      L N+YA  G  +DA R   ++ + G+      SW  +    
Sbjct: 443 AAEHVFELD-PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI---- 497

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLV----SVLCACNHAGLVAEAKH---HFESMEK 528
                 + A+ MF  +  D   P    +      VL      G V +  H   H +  E+
Sbjct: 498 ------ENAIHMF--VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQER 549

Query: 529 KFGIQPMQEHYACMIDIL 546
           +  +Q   E  A    +L
Sbjct: 550 EVNLQYHSEKIALAFALL 567


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/712 (36%), Positives = 389/712 (54%), Gaps = 50/712 (7%)

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
           GS  SL  R +HG+  K G    + SAN L+ +Y K  NL+ A  +F +I H +  +W  
Sbjct: 46  GSPPSL--RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTI 103

Query: 168 VIAGCVLHE-HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +I+G       ++    LF++M++    PN +T +S LK C+     + G+ +H  +++ 
Sbjct: 104 LISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRN 163

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG---DMEAA 283
            +  D ++   ++D+Y KC   + A   F LM EK++++WNI+I  +L+ G     +E  
Sbjct: 164 GVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMF 223

Query: 284 SLFP------W----------------------MYREGVGFDQTTLSTVLKSVASFQAIG 315
             FP      W                      M   G  F   T S  L  V+S   + 
Sbjct: 224 RNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVE 283

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE----------------S 359
           V +Q+H   +     SD YI +SL++ YGKCG ++ A  I K+                 
Sbjct: 284 VGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKE 343

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               +V+ +SM++ Y   G  E+ +K +  M    I  D    +++++ACAN    E GK
Sbjct: 344 PKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGK 403

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H +I K G   D + G+SL++MY+K GS+DDA   F +I +  +V W++MI G A HG
Sbjct: 404 QIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHG 463

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           +GKEA+ +F  ML  G++PN +T V VL AC+H GL+ E   +F  M+  + I P  EHY
Sbjct: 464 QGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHY 523

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
             M+++ GRAG   EA   +         SVW + L + R++KN  +G+  +EML    P
Sbjct: 524 TSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAP 583

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
                ++LLSN+ +S   WD  A VR  M    +KK+PG SW+++KD++++FTVGDRSH 
Sbjct: 584 SDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHP 643

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           + KEIY+ LD +   L + GY    +  + DVEE + E L+ HHSEKLA+ F +I T P 
Sbjct: 644 QDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPR 703

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             IR+ KNLRIC DCH  F++ S+++ REIIVRD +RFHHF+  SCSCG YW
Sbjct: 704 TPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 251/539 (46%), Gaps = 67/539 (12%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAV-CFFKEMVLSG 91
           AN L+ +Y K  N   + +LFD I  ++  +W  L S +       E V   F+EM   G
Sbjct: 70  ANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADG 129

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV------- 144
             PN+++LSS++  C+   +   G+ IH + ++ G   D+   N+++D+Y K        
Sbjct: 130 ACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAE 189

Query: 145 ------------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                   G++E ++ +F++  + D+VSWN +I G +   +   
Sbjct: 190 SFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERL 249

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+    M +     +  T++ AL   + + L E+GRQLH  ++   + SD  +   LV+
Sbjct: 250 ALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVE 309

Query: 241 MYAKCGSMDEARMIFHLM----------------PEKNLIAWNIVISGHLQNGGDMEAAS 284
           MY KCG MD+A  I   +                P+  +++W+ ++SG++ NG   +   
Sbjct: 310 MYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMK 369

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            F  M  E +  D  T++T++ + A+   +   KQ+HA   K     D Y+ +SLID Y 
Sbjct: 370 TFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYS 429

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           K G ++DA+ IF++    ++V  TSMI+  A  G G+EA+ L+  M +  I P+      
Sbjct: 430 KSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVG 489

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN-------SLVNMYAKCGSIDDADRAF 457
           +LNAC+++   E+G +       F  M DT+  N       S+VN+Y + G + +A    
Sbjct: 490 VLNACSHVGLIEEGCRY------FRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFI 543

Query: 458 SEIPDRGIVS-WSAMIGGLAQH---GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
            E       S W + +     H     GK   +M  Q       P+   L+S +C+ NH
Sbjct: 544 FENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSD--PDAYILLSNMCSSNH 600



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 247/539 (45%), Gaps = 65/539 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C+ + ++  G  +H  ++  G   D  + NS++ +Y KC  F  +   F+ + E+ 
Sbjct: 140 VLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKD 199

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKE-------------------------------MVL 89
           VVSWN +   Y+    +E+++  F+                                MV 
Sbjct: 200 VVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVA 259

Query: 90  SGIR--PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
            G    P  FS++ ++ +     +  +GR++HG  +  G +SD +  ++LV+MY K G +
Sbjct: 260 HGTEFSPVTFSIALILVSSLSLVE--VGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRM 317

Query: 148 EDAVAVFKDI--------------EHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           + A  + KD+              + P   +VSW+++++G V +   +  +K F+ M   
Sbjct: 318 DKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCE 377

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            I  ++ T  + + ACA   + E G+Q+H  + K+ ++ D  VG  L+DMY+K GS+D+A
Sbjct: 378 LIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDA 437

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
            MIF  + E N++ W  +ISG   +G   EA SLF  M   G+  ++ T   VL + +  
Sbjct: 438 LMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHV 497

Query: 312 QAIGV-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC--- 367
             I   C+    +        +     S+++ YG+ GH+ +A     E+S     +    
Sbjct: 498 GLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRS 557

Query: 368 -TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             S    +  F +G+   ++ L  Q    +PD+++   L N C++   +++   V   + 
Sbjct: 558 FLSSCRLHKNFNMGKSVSEMLL--QSAPSDPDAYIL--LSNMCSSNHQWDEAAIVRSLMY 613

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW-SAMIGGLAQHGRGKEA 484
           + G       G S V +  +  S    DR+  +  D+ I S+  ++IG L + G   +A
Sbjct: 614 QRGVKKQ--PGQSWVQLKDQIHSFTVGDRSHPQ--DKEIYSYLDSLIGRLKEIGYSLDA 668



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           S L++  ++ +    + +H H  K G +    + N L+ +Y K  ++D A + F EI  +
Sbjct: 37  SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96

Query: 464 GIVSWSAMIGGLAQ-HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
              +W+ +I G A+  G  +    +F +M  DG  PN  TL SVL  C+    +   K  
Sbjct: 97  NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           H   +    G   + E+   ++D+  +  +F+ A    + M  + +   W  ++GA
Sbjct: 157 HAWILRNGVGGDVVLEN--SILDLYLKCKEFEYAESFFELM-IEKDVVSWNIMIGA 209


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/715 (35%), Positives = 417/715 (58%), Gaps = 3/715 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+C +   + LG  VH     TG  SD +V ++L+ MY+  G   D+R  FD +P R 
Sbjct: 147 VVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRD 206

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN +   Y+    +  AV  F+ M +SG  PN  +L+  ++ CA   D L G ++H 
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS 266

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G + ++  AN L+ MYAK   L+DA  +F+ +   D+V+WN +I+GCV +   D 
Sbjct: 267 LAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDE 326

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF  M  S   P+  T  S L A   +   + G+++H  +I+  +  D  +   LVD
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVD 386

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC  +  AR ++      +++  + VISG++ NG   +A  +F ++  + +  +  T
Sbjct: 387 IYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVT 446

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + AS  A+ + +++H   ++ A+E   Y+ ++L+D Y KCG ++ +  IF + S
Sbjct: 447 VASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMS 506

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   SMI++++Q G  +EAL L+ +M    I  ++   SS L+ACA+L A   GK+
Sbjct: 507 LKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKE 566

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK    +D FA ++L++MYAKCG+++ A R F  +PD+  VSW+++I     HG 
Sbjct: 567 IHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGL 626

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE++    +M E+G  P+H+T ++++ AC HAGLV E    F+ M K++ I P  EH+A
Sbjct: 627 VKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFA 686

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+  R+G+  +A++ +  MPF+ +A +WGALL A R+++NVE+   A++ LF ++P 
Sbjct: 687 CMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPG 746

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VL+SNI A AG WD V+KVRR MKDNK+ K PG SW++V +  + F   D+SH  
Sbjct: 747 NSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPE 806

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL-HDVEESEKEQLLYHHSEKLAVAFGLI 714
           S++IY  L  +   L + GYVP    DL H +      Q+ +   ++L    G +
Sbjct: 807 SEDIYTSLKALLQELREEGYVP--RPDLCHPMHPDNNTQVGFKKYKRLFDVLGTL 859



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 175/585 (29%), Positives = 303/585 (51%), Gaps = 10/585 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE---FVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +L+ C S   L LGLQ+H   V +G  S+     +   L+ MY     F D+  +F A+P
Sbjct: 38  LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 58  ER---SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDS 112
                S + WN L   +        AV F+ +M    +   P+  +L  ++ +CA  G  
Sbjct: 98  RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            LGR +H  +   G  SD++  +AL+ MY+  G L DA   F  +   D V WN ++ G 
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           +       A++LF+ M+ S   PN  T    L  CA       G QLH   +K  ++ + 
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEV 277

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+ MYAKC  +D+A  +F L+P  +L+ WN +ISG +QNG   EA  LF  M R 
Sbjct: 278 AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G   D  TL ++L ++     +   K+VH   ++     D ++V++L+D Y KC  V  A
Sbjct: 338 GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA 397

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             ++  + A+D+V  +++I+ Y   G+ E+AL+++  + ++ I P++   +S+L ACA++
Sbjct: 398 RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASI 457

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           SA   G+++H ++++  +    +  ++L++MYAKCG +D +   FS++  +  V+W++MI
Sbjct: 458 SALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMI 517

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
              +Q+G  +EAL +F QM  +G+  N++T+ S L AC     +   K     +  K  I
Sbjct: 518 SSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGK-EIHGVIIKGPI 576

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +      + +ID+  + G  + A+ + + MP   N   W +++ A
Sbjct: 577 KADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIISA 620


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 274/730 (37%), Positives = 431/730 (59%), Gaps = 16/730 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           +LK+C   +   LG  VH  ++    + D  + NSL+ +Y+K G+   ++ +F+ +    
Sbjct: 68  LLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFG 127

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           +R VVSW+++ +C+ +     +A+  F E +  G+ PN++  +++I AC+ S    +GR 
Sbjct: 128 KRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 118 IHGYSIKLG-YDSDMFSANALVDMYAKVGN-LEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           I G+ +K G ++SD+    +L+DM+ K  N  E+A  VF  +   ++V+W  +I  C+  
Sbjct: 188 ILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A++ F  M  S    + FT +S   ACA +E   LGRQLH   I+  +  D  V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--VE 305

Query: 236 VGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYR 291
             LVDMYAKC   GS+D+ R +F  M + ++++W  +I+G++QN     EA +LF  M  
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMIT 365

Query: 292 EG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           +G V  +  T S+  K+  +     V KQV   + K    S+  + NS+I  + KC  +E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRME 425

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           DA   F+  S  +LV+  + +    +    E A +L  E+ +RE+   +F  +SLL+  A
Sbjct: 426 DARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVA 485

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           N+ +  +G+Q+H  ++K G   +    N+L++MY+KCGSID A R FS + +R ++SW++
Sbjct: 486 NVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTS 545

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G A+HG  +  L+ F QM ++GV PN +T V++L AC+H GLV+E   HF SM +  
Sbjct: 546 MITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
            I+P  EHYACM+D+L RAG   +A E ++TMPFQA+  VW   LGA R++ N E+G+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           A  +   +P + + ++ LSNIYASAG W+   ++RR MK+  L KE G SWIEV DKV+ 
Sbjct: 666 ARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHK 725

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV----EESEKEQLLYHHSEK 706
           F VGD SH  + +IY +LD +   + + GYVP  +  LH +    +E++KE LLY HSEK
Sbjct: 726 FYVGDTSHPNAHQIYDELDWLITEIKRCGYVPDTDLVLHKLEEEDDEAKKEMLLYQHSEK 785

Query: 707 LAVAFGLIAT 716
           +AVAFGLI+T
Sbjct: 786 IAVAFGLIST 795



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 256/511 (50%), Gaps = 17/511 (3%)

Query: 77  LEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           L  AV     M   GIRP +  + SS++ +C  +    LG+ +H   I+   + D    N
Sbjct: 42  LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYN 101

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDW-ALKLFQQMKSS 191
           +L+ +Y+K G+L  A  VF+ +      D+VSW+A++A C  +   ++ A+KLF +    
Sbjct: 102 SLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMA-CFGNNGREFDAIKLFVEFLEM 160

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKC-GSMD 249
            + PN + YT+ ++AC+  +   +GR +   L+K    +SD  VG  L+DM+ K   S +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M E N++ W ++I+  +Q G   EA   F  M   G   D+ TLS+V  + A
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVA 366
             + + + +Q+H+ ++++    D  +  SL+D Y KC   G V+D  K+F       +++
Sbjct: 281 ELENLSLGRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMS 338

Query: 367 CTSMITAYAQ-FGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            T++IT Y Q   L  EA+ L+ EM  +  + P+ F  SS   AC N+S    GKQV  H
Sbjct: 339 WTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGH 398

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
             K G  S++   NS+++M+ KC  ++DA  AF  + ++ +VS++  + G  ++   + A
Sbjct: 399 AFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHA 458

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
            ++  ++ E  +  +  T  S+L    + G + + +    S   K G+   Q     +I 
Sbjct: 459 FELLSEIAERELGVSAFTFASLLSGVANVGSLRKGE-QIHSQVLKLGLSCNQPVCNALIS 517

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           +  + G    A  +   M    N   W +++
Sbjct: 518 MYSKCGSIDTASRVFSLMD-NRNVISWTSMI 547


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 278/786 (35%), Positives = 436/786 (55%), Gaps = 26/786 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           LK+C        G QVH +    G  D D FV NSLV MY +CG   D+ ++F+ +  R+
Sbjct: 74  LKSCRGDD----GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRN 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIR-PNEFSLSSMINACAGSGDSLLGRK 117
           +VSWN+L +           +  F++ +  L G   P+E +L +++  CA       GR 
Sbjct: 130 LVSWNALMAAVAD---PRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRA 186

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-----DIVSWNAVIAGC 172
           +HG ++K G+D+    +N LVDMYAK G + DA   F  +E P     ++VSWN ++ G 
Sbjct: 187 VHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAF--LEAPPGAGRNVVSWNVMLGGY 244

Query: 173 VLHEHNDWALKLFQQMKSSE--INPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIK 229
             +     A  L ++M+  E  +  +  T  S L  C+G+ EL +L R+LH  +++  + 
Sbjct: 245 ARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKL-RELHAFVVRRGLH 303

Query: 230 -SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            +  +V   L+  Y +CG +  A  +F  +  K + +WN +I  H QNG    A  LF  
Sbjct: 304 LTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFRE 363

Query: 289 MYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
           M    G   D  ++ ++L +  + + +   K  H   ++   E D +I  SL+  Y +CG
Sbjct: 364 MTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG 423

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN--PDSFVCSSL 405
               A  +F      D V+  +MI  Y+Q GL  E+L+L+ EMQ ++    P     +S 
Sbjct: 424 RESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSA 483

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L AC+ L A   GK++H   +K     D+F  +S+++MY+KCGS+DDA   F  +  +  
Sbjct: 484 LVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDA 543

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           VSW+ MI G A +GRGKEA+ ++ +M  +G+ P+  T + +L AC HAG++ +    F+ 
Sbjct: 544 VSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQE 603

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
           M     I+   EHYAC+I +L RAG+F +A+ L++ MP + +A +  ++L A  ++  VE
Sbjct: 604 MRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVE 663

Query: 586 VGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVK 645
           +G+  A+ L  +EP K+  +VL SN+YA +  WD + KVR+ ++D  + KEPG SWI++ 
Sbjct: 664 LGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIA 723

Query: 646 DKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSE 705
            KVY+F  G+ S     ++      + + +  AGY P     LH++EE EK + L  HSE
Sbjct: 724 GKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSE 783

Query: 706 KLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSC 765
           K A+AFGL+ T     +RV KN+R+C DCH + + ISK+  REI+VRD  RFHHFR+G C
Sbjct: 784 KQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLC 843

Query: 766 SCGGYW 771
           SCG YW
Sbjct: 844 SCGDYW 849



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 236/467 (50%), Gaps = 22/467 (4%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLGRK 117
           S+  WN L +         +A+     ++ +  G+ P+ F+L   + +C G      GR+
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQ 84

Query: 118 IHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +H  + KLG  D D F  N+LV MY + G ++DA  VF+ +   ++VSWNA++A      
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144

Query: 177 HNDWALKLFQ---QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                L+LF+   +       P+  T  + L  CA +   E GR +H   +K    + P 
Sbjct: 145 RG---LELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPE---KNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           V   LVDMYAKCG M +A   F   P    +N+++WN+++ G+ +NG    A  L   M 
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261

Query: 291 RE--GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE-SDDYIVNSLIDAYGKCG 347
            E  GV  D+ T+ +VL   +    +   +++HA  V+     + D + N+LI AYG+CG
Sbjct: 262 MEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCG 321

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EINPDSFVCSSLL 406
            +  A ++F    +  + +  ++I A+AQ G    A++L+ EM +     PD F   SLL
Sbjct: 322 CLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLL 381

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            AC NL     GK  H  I++ G   D+F   SL+++Y +CG    A   F  + ++  V
Sbjct: 382 LACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEV 441

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQML--EDGVLPNHITLVSVLCACN 511
           SW+ MI G +Q+G   E+LQ+F +M   + G  P+ +   S L AC+
Sbjct: 442 SWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACS 488



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 163/550 (29%), Positives = 265/550 (48%), Gaps = 48/550 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           VL  C +      G  VHG+ V +G+D+   V+N LV MYAKCG   D+   F   P   
Sbjct: 171 VLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGA 230

Query: 59  -RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLG 115
            R+VVSWN +   Y        A    +EM +   G+  +E ++ S++  C+G  +    
Sbjct: 231 GRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKL 290

Query: 116 RKIHGYSIKLG--YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           R++H + ++ G     DM   NAL+  Y + G L  A  VF  I    + SWNA+I    
Sbjct: 291 RELHAFVVRRGLHLTGDMVP-NALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHA 349

Query: 174 LHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            +     A++LF++M ++    P+ F+  S L AC  ++    G+  H  +++  ++ D 
Sbjct: 350 QNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDS 409

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            + V L+ +Y +CG    AR++F  + EK+ ++WN +I+G+ QNG   E+  LF  M  +
Sbjct: 410 FIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSK 469

Query: 293 GVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
             G   + L  ++ L + +   A+ + K++H  ++K     D ++ +S+ID Y KCG V+
Sbjct: 470 KGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVD 529

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           DA   F    A D V+ T MIT YA  G G+EA+ LY +M    + PD F    LL AC 
Sbjct: 530 DARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACG 589

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +    E G           F  +     +L  + AK                  +  ++ 
Sbjct: 590 HAGMLEDG---------LCFFQEM---RNLPKIEAK------------------LEHYAC 619

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           +IG L++ GR  +A+ +   M E+   P+   L SVL AC+  G V   K   +  +K  
Sbjct: 620 VIGMLSRAGRFADAVALMEVMPEE---PDAKILSSVLSACHMHGEVELGK---KVADKLL 673

Query: 531 GIQPMQ-EHY 539
            ++P + EHY
Sbjct: 674 ELEPHKAEHY 683



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 28/368 (7%)

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQL 219
           +  WN ++A       +  AL +  ++   S  + P+ FT   ALK+C G +    GRQ+
Sbjct: 30  LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQV 85

Query: 220 HCSLIKMEI-KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           H    K+ +   DP VG  LV MY +CG +D+A  +F  M  +NL++WN +++       
Sbjct: 86  HAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRR 145

Query: 279 DMEAASLFPWMYRE-------GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            +E       ++R+           D+ TL TVL   A+       + VH L+VK+ +++
Sbjct: 146 GLE-------LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKES---SAVDLVACTSMITAYAQFGLGEEALKLYL 388
              + N L+D Y KCG + DA   F E+   +  ++V+   M+  YA+ G    A  L  
Sbjct: 199 APRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLR 258

Query: 389 EMQ--DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF-MSDTFAGNSLVNMYA 445
           EMQ  +R +  D     S+L  C+ L    + +++H  +++ G  ++     N+L+  Y 
Sbjct: 259 EMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYG 318

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED-GVLPNHITLV 504
           +CG +  A R F  I  + + SW+A+IG  AQ+G    A+++F +M    G  P+  ++ 
Sbjct: 319 RCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIG 378

Query: 505 SVLCACNH 512
           S+L AC +
Sbjct: 379 SLLLACGN 386


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/583 (41%), Positives = 352/583 (60%), Gaps = 1/583 (0%)

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +S+ + P    Y S L++C   +  + G+QLH  +       D ++   LV++Y  C S+
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
             AR++F  +P+ N+  WN++I G+  NG    A  L+  M+  G+  D  T   VLK+ 
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A+  AI   +++H   V+T +E D ++  +LID Y KCG V  A ++F +    D V   
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWN 246

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SM+ AY+Q G  +  L L  EM    + P      + ++A A+ +A  QG+++H    + 
Sbjct: 247 SMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQ 306

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            F S      +LV+MYAKCGS+  A   F  +  + +VSW+AMI G A HG   EAL +F
Sbjct: 307 EFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLF 366

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
            +M      P+HIT V VL AC+H GL+ E    FE+M + + I P  +HY CM+D+LG 
Sbjct: 367 EEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGH 425

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           +G+  EA  L+  M    ++ VWGALL + +I+ NVE+G+ A E L  +EP+ +  +V+L
Sbjct: 426 SGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVIL 485

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SNIYA AG W+ VAK+R+ M D +LKK    SWIEVK+KV+ F  GD SH  S EIY++L
Sbjct: 486 SNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSEL 545

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
           + V  L+ +AGY P   +  HDVE+ EK  ++  HSE+LA+AFGLI+TPPG  + + KNL
Sbjct: 546 ERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNL 605

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           RIC DCH + +FISKI  REI VRDVNR+HHF++G CSCG YW
Sbjct: 606 RICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 215/467 (46%), Gaps = 39/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C ++K +  G Q+H  V   GF  D  +A  LV +Y  C +   +R LFD IP+ +
Sbjct: 81  LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHN 140

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN L   Y      E AV  + +M   G+ P+ F+   ++ ACA       GR+IH 
Sbjct: 141 IFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHE 200

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + ++ G++ D+F   AL+DMYAK G +  A  VF  I   D V WN+++A    + H D 
Sbjct: 201 HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDA 260

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L L  +M  + + P   T  +A+ A A       GR+LH    + E +S   V   LVD
Sbjct: 261 CLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVD 320

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  AR +F  +  K +++WN +I+G+  +G   EA  LF  M R     D  T
Sbjct: 321 MYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKP-DHIT 379

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL +         C     L     F                    E  ++ +K   
Sbjct: 380 FVGVLSA---------CSHGGLLEEGWMF-------------------FETMIRDYKIDP 411

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            V    C  M+      G  +EA  L ++M+   + PDS V  +LLN+C   +  E G+ 
Sbjct: 412 TVQHYTC--MVDLLGHSGRLDEAYNLIMQMK---VLPDSGVWGALLNSCKIHANVELGEI 466

Query: 421 VHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
               +I+   +    AGN ++  N+YA+ G  +   +    + DR +
Sbjct: 467 ALERLIE---LEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRL 510



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 201/410 (49%), Gaps = 10/410 (2%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P   + +S++ +C        G+++H      G+  D   A  LV++Y    +L  A 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F  I   +I  WN +I G   +   + A++L+ QM    + P+ FT+   LKACA + 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
             E GR++H  +++   + D  VG  L+DMYAKCG +  AR +F  +  ++ + WN +++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            + QNG      SL   M   G+   + TL T + + A   A+   +++H LS +  FES
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            D +  +L+D Y KCG V  A  +F+      +V+  +MIT YA  G   EAL L+ EM 
Sbjct: 311 HDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM- 369

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSI 450
           +R   PD      +L+AC++    E+G      +I+   +  T    + +V++    G +
Sbjct: 370 NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRL 429

Query: 451 DDADRAFSE---IPDRGIVSWSAMIGGLAQHGR---GKEALQMFGQMLED 494
           D+A     +   +PD G+  W A++     H     G+ AL+   ++  D
Sbjct: 430 DEAYNLIMQMKVLPDSGV--WGALLNSCKIHANVELGEIALERLIELEPD 477


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/696 (36%), Positives = 400/696 (57%), Gaps = 2/696 (0%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA  F KEM  + +     S   +  AC        GR IH    +   +      N 
Sbjct: 68  LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ MY   G+  D   VF ++   ++VSW  VI+    +   + A++LF  M++S I PN
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
              Y S L++C G    ELG+Q+H  +I+ ++ ++  V   + +MY +CG ++ A+++F 
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M  +N + W  ++ G+ Q      A  LF  M  EGV  D+   S VLK     +   +
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +Q+H+  VK   ES+  +   L+D Y KCG +E A + F   S  + V+ +++I+ ++Q
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  E+ +K++  ++   +  +SF+ +S+  ACA  +    G Q H   IK G +S  + 
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            +++V MY+KCG +D A RAF  I +   V+W+A+I G A HG   EAL  F +M   GV
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            PN +T ++VL AC+H+GLVAEAK +  SM + +G++P  +HY CMID   RAG  QEA+
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEAL 547

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
           EL++ MPF+ +A  W +LLG    + ++++G+ AAE LF ++P  ++ ++LL N+Y++ G
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS-DLL 675
            W+    VR+ M + +LKKE   SWI VK +V+ F VGDR H +++ IY+KL+E    ++
Sbjct: 608 KWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVI 667

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
           +    +   E D+     + KEQLL  HSEKLA+AFGLI+T   A I V KNLR C DCH
Sbjct: 668 DSPVRLLNEEDDVSCSLSARKEQLL-DHSEKLAIAFGLISTEDNAPILVFKNLRACRDCH 726

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              + +S +  R+I+VRD  RFHHF++G CSC  YW
Sbjct: 727 EFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 250/480 (52%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC   + L  G  +H  +  T  +    + N L+ MY  CG+ ID +++FD +  ++
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKN 152

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + S Y     LE+A+  F +M  SGIRPN     S++ +C G     LG++IH 
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHS 212

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+   ++++    A+ +MY + G LE A  VF  ++  + V+W  ++ G    +  + 
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF +M    +  + F ++  LK C G+E  ++GRQ+H  ++K+  +S+  VG  LVD
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVD 332

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KCG ++ A   F  + E N ++W+ +ISG  Q+G   +   +F  +  EGV  +   
Sbjct: 333 FYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFI 392

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++V ++ A+   + +  Q H  ++K    S  Y  ++++  Y KCG ++ A + F+   
Sbjct: 393 YTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID 452

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D VA T++I+ YA  G   EAL  +  MQ   + P++    ++L AC++     + KQ
Sbjct: 453 EPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               + + +G        + +++ Y++ G + +A    + +P +   +SW +++GG   H
Sbjct: 513 YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAH 572



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 8/220 (3%)

Query: 371 ITAYAQFGLGEEALKLYLEMQDREIN--PDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           + + ++ G  +EA     EM D +++  P S+ C  L  AC  L +   G+ +H  + + 
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQC--LFEACGKLRSLADGRLIHDRLRRT 116

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
                    N L+ MY  CGS  D  + F E+  + +VSW  +I   A++G  ++A+++F
Sbjct: 117 VKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLF 176

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILG 547
             M   G+ PN    +S+L +C     +   K  H   +  +       E   C + +  
Sbjct: 177 SDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYV-- 234

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           R G  + A  + D M  Q NA  W  L+      K +EV 
Sbjct: 235 RCGWLEGAKLVFDGMDAQ-NAVTWTGLMVGYTQAKKLEVA 273


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/662 (38%), Positives = 387/662 (58%), Gaps = 37/662 (5%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L  A++VF+ I+ P+++ WN ++ G         AL+++ +M S    PN +++   LK+
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL--------- 257
           CA  +  E GRQ+H  ++K+    D  V   L+ MYA+ G +++AR +F           
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 258 ----------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                                 + E+++++WN +I+G+++NG   EA  LF  M R  V 
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHA----LSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            D+ TL +V+ + A   +I + +QVH+          F S   IVN+LID Y KCG VE 
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A  +F+  S  D+V+  ++I  Y    L +EAL L+ EM      P+     S+L ACA+
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 412 LSAYEQGKQVHVHIIKF--GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           L A + G+ +HV+I K   G  ++T    SL++MYAKCG I+ A + F+ +  R + SW+
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMI G A HGR   A  +F +M  + V P+ IT V +L AC+H+GL+   +  F+SM + 
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           + + P  EHY CMID+LG +G F+EA E++ TMP + +  +W +LL A + + N+E+ + 
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAES 493

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
            A+ L  IEPE S ++VLLSNIYA+AG W++VA+VR  +    +KK PG S IEV   V+
Sbjct: 494 FAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVH 553

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F +GD+ H R +EIY  L+E+   L +AG+ P     L ++EE  KE  L HHSEKLA+
Sbjct: 554 EFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAI 613

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AFGLI+T PG  + + KNLR+C +CH + + ISKI  REI+ RD  RFHHFR+G CSC  
Sbjct: 614 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCD 673

Query: 770 YW 771
           YW
Sbjct: 674 YW 675



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 165/587 (28%), Positives = 254/587 (43%), Gaps = 94/587 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA----- 55
           +LK+C   K    G Q+H  V+  G   D +V  SL+ MYA+ G   D+R++FDA     
Sbjct: 70  LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129

Query: 56  --------------------------IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     I ER VVSWN++ + YV     EEA+  FKEM+ 
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL----GYDSDMFSANALVDMYAKVG 145
           + +RP+E +L S+++ACA SG   LGR++H +        G+ S +   NAL+D+Y+K G
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           ++E A  +F+ +   D+VSWN +I G         AL LFQ+M  S   PN  T  S L 
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309

Query: 206 ACAGMELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           ACA +   ++GR +H  + K    + ++  +   L+DMYAKCG ++ A  +F+ M  ++L
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            +WN +I G   +G    A  LF  M    V  D  T   +L + +    + + +Q+   
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI--- 426

Query: 324 SVKTAFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
                F+S   DY +   ++ YG                         MI      GL +
Sbjct: 427 -----FKSMTQDYNLTPKLEHYG------------------------CMIDLLGHSGLFK 457

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EA ++   M    + PD  +  SLL AC      E  +     +IK     ++ +   L 
Sbjct: 458 EAEEMIHTMP---MEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIE-PENSGSYVLLS 513

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSA------------MIGGLAQHGRGKEALQMFG 489
           N+YA  G  +D  R    +  +G+                  I G   H R +E   M  
Sbjct: 514 NIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLE 573

Query: 490 ----QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
               Q+ E G  P+      VL            +HH E +   FG+
Sbjct: 574 EMDVQLEEAGFAPD---TSEVLQEMEEEWKEGALRHHSEKLAIAFGL 617



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 218/480 (45%), Gaps = 40/480 (8%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F+ I E +++ WN++   +        A+  +  MV  G  PN +S   ++ +CA S  
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED---------------------- 149
              GR+IH   +KLG   D +   +L+ MYA+ G LED                      
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 150 ---------AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                    A  VF +I   D+VSWNA+I G V +   + AL+LF++M  + + P+  T 
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 201 TSALKACAGMELKELGRQLHCSLIKME----IKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            S + ACA     ELGRQ+H  +   +      S   +   L+D+Y+KCG ++ A  +F 
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +  K++++WN +I G+       EA  LF  M R G   +  TL +VL + A   AI +
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDI 319

Query: 317 CKQVHALSVK--TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            + +H    K      ++  +  SLID Y KCG +E A ++F       L +  +MI  +
Sbjct: 320 GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF 379

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSD 433
           A  G    A  L+  M+   + PD      LL+AC++    + G+Q+   + + +     
Sbjct: 380 AMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPK 439

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
                 ++++    G   +A+     +P +   V W +++    +HG   E  + F Q L
Sbjct: 440 LEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG-NLELAESFAQKL 498


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/708 (36%), Positives = 391/708 (55%), Gaps = 66/708 (9%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           + F+ N+L+ +YAK G L DA  VF ++   D VSW  +I G         A+K F  M 
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
           S    P+ FT T+ L +CA ME   +GR++H  ++K+ + S   V   ++ MY KCG  +
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399

Query: 250 EARMIFHLMP-------------------------------EKNLIAWNIVISGHLQNGG 278
            AR +F  M                                E+++++WN +I+G+ QNG 
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459

Query: 279 DMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
           D  A   F  M     +  D  T+++VL + A+ + + + KQ+H+  ++T       I+N
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDL--------------------------------- 364
           +LI  Y K G VE A +I  ++   DL                                 
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           +A T+MI  Y Q G  +EA++L+  M      P+S   +++L+ACA+L+  + GKQ+H  
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKE 483
            I+          N+++ +YA+ GS+  A R F +I  R   ++W++MI  +AQHG G++
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           A+ +F +M+  GV P+HIT V VL AC HAG V + K ++E M+ + GI P   HYACM+
Sbjct: 700 AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+  RAG   EA E +  MP   +  VWG+LL A R+ KN ++ + AA  L +I+P  S 
Sbjct: 760 DLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSG 819

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +  L+N+Y++ G W++ A++ +  KD  +KKE G SW  V+ KV+ F   D  H +   
Sbjct: 820 AYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDS 879

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           IY K  E+ + + KAG+VP + + LHDV++  KE+LL  HSEKLA+AFGLI+TP   T+R
Sbjct: 880 IYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLR 939

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + KNLR+C DCHT+ +FISK V REIIVRD  RFHHFR+G CSC  YW
Sbjct: 940 IMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 242/500 (48%), Gaps = 67/500 (13%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           + F  NSL+ +YAK G   D+  +F  +P+R  VSW  +           +AV  F +MV
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G  P++F+L++++++CA      +GRK+H + +KLG  S +  AN+++ MY K G+ E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399

Query: 149 DAVAVFKDIE-------------------------------HPDIVSWNAVIAGCVLHEH 177
            A AVF+ ++                                  IVSWN +IAG   +  
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459

Query: 178 NDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           +  ALK F +M S S + P+ FT TS L ACA + + ++G+Q+H  +++  +     +  
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519

Query: 237 GLVDMYAKCGSMD---------------------------------EARMIFHLMPEKNL 263
            L+  YAK GS++                                 +AR IF +M  +++
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           IAW  +I G+ QNG + EA  LF  M   G   +  TL+ VL + AS   +   KQ+H  
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITAYAQFGLGEE 382
           ++++  E    + N++I  Y + G V  A ++F +     + +  TSMI A AQ GLGE+
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLV 441
           A+ L+ EM    + PD      +L+ACA+    ++GK+ +  +  + G +        +V
Sbjct: 700 AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759

Query: 442 NMYAKCGSIDDADRAFSEIP 461
           +++A+ G + +A      +P
Sbjct: 760 DLHARAGLLTEAHEFIQRMP 779



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 252/586 (43%), Gaps = 126/586 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C + +   +G +VH  VV  G  S   VANS++ MY KCG+   +R +F+ +  RS
Sbjct: 353 VLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRS 412

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-------------------------------- 88
           V SWN + S Y H   +E AV  F+ MV                                
Sbjct: 413 VSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLS 472

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY--------------------- 127
            S + P+ F+++S+++ACA      +G+++H Y ++ G                      
Sbjct: 473 ASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVE 532

Query: 128 ------------DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
                       D ++ S  AL++ Y K+G+ + A  +F  + + D+++W A+I G   +
Sbjct: 533 TARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQN 592

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             ND A++LF+ M      PN  T  + L ACA +   + G+Q+HC  I+   +    V 
Sbjct: 593 GQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVS 652

Query: 236 VGLVDMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             ++ +YA+ GS+  AR +F  +   K  I W  +I    Q+G   +A  LF  M R GV
Sbjct: 653 NAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGV 712

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL + A    +   K+ +        +++  IV  +               
Sbjct: 713 KPDHITYVGVLSACAHAGFVDKGKRYY-----EQMQNEHGIVPQM--------------- 752

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC----- 409
                      AC  M+  +A+ GL  EA +    +Q   + PD+ V  SLL AC     
Sbjct: 753 --------SHYAC--MVDLHARAGLLTEAHEF---IQRMPVAPDTVVWGSLLAACRVRKN 799

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI---- 465
           A+L+    GK + +     G      A ++L N+Y+ CG  +DA R +    D+G+    
Sbjct: 800 ADLAELAAGKLLSIDPHNSG------AYSALANVYSACGRWNDAARIWKLRKDKGVKKET 853

Query: 466 -VSWSAMIGGLAQHGRG-----------KEALQMFGQMLEDGVLPN 499
             SW+ + G +   G             ++A +M+ ++ + G +P+
Sbjct: 854 GFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPD 899



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 43/212 (20%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDT---------------------------- 434
           + LL  C        G+ +H H +K G +  T                            
Sbjct: 213 ARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFD 272

Query: 435 ---------FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
                    F  NSL+++YAK G + DA   F+E+PDR  VSW+ MI GL + GR  +A+
Sbjct: 273 DIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAV 332

Query: 486 QMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           + F  M+ +G  P+  TL +VL  CA   A  V    H F     K G+         ++
Sbjct: 333 KTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVV---KLGLSSCVPVANSVL 389

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            + G+ G  + A  + + M  ++ +S W  ++
Sbjct: 390 YMYGKCGDAETARAVFERMQVRSVSS-WNVMV 420


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/655 (40%), Positives = 398/655 (60%), Gaps = 14/655 (2%)

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           +D ++FS N L+  YAK   +E A  +F ++  PD VS+N +IA          A +LF 
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M+ + ++ + FT +  + AC G+ +  L RQLH   +   + S   VG  L+  Y+K G
Sbjct: 130 EMREAFLDMDGFTLSGIITAC-GINVG-LIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 247 SMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
            + EAR IFH + E ++ ++WN ++  ++Q+    +A  L+  M   G+  D  TL++VL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVDL 364
            +  + Q +    Q HA  +K+ +  + ++ + LID Y KCG  + D  K+F E S  DL
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 365 VACTSMITAYAQF-GLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQV 421
           V   +MI+ Y+ +  L +EAL+ + ++Q     PD  S VC  +++AC+N+S+  QG+QV
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVC--VISACSNMSSPSQGRQV 365

Query: 422 HVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           H   +K    S+  +  N+L+ MY+KCG++ DA   F  +P+   VS+++MI G AQHG 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G ++L +F +MLE G  P +IT +SVL AC H G V + K +F  M++KFGI+P   H++
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGRAGK  EA  L++T+PF      W ALLGA RI+ NVE+   AA  L  ++P 
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPL 545

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            ++ +V+L+NIY+  G   + A VR+ M+D  +KK+PG SWIEV  +++ F   D  H  
Sbjct: 546 NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL----HDVEESEKEQLLYHHSEKLAVAFGLIAT 716
            K+I   L+E+   + K GY P V + L      V + E+E  L HHSEKLAV+FGL++T
Sbjct: 606 IKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMST 665

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G  I V KNLRICVDCH + ++IS++V REI VRD +RFH F++G CSCGGYW
Sbjct: 666 REGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 263/532 (49%), Gaps = 45/532 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK C + +DL  G  +H + + +   +  +++N  +++Y+KC     +RR+FD   + +V
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-------- 113
            S+N+L S Y    ++E A   F EM     +P+  S +++I A A  GD+         
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 114 -------------------------LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                                    L R++H  S+  G DS +   NAL+  Y+K G L+
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 149 DAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           +A  +F  + E  D VSWN+++   + H     AL+L+ +M    +  ++FT  S L A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS-MDEARMIFHLMPEKNLIAW 266
             ++    G Q H  LIK     +  VG GL+D+Y+KCG  M + R +F  +   +L+ W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 267 NIVISGH-LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           N +ISG+ L      EA   F  +   G   D  +L  V+ + ++  +    +QVH L++
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 326 KTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           K    S+   V N+LI  Y KCG++ DA  +F      + V+  SMI  YAQ G+G ++L
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVN 442
            L+  M +    P +    S+L ACA+    E GK ++ +++K  F  +  AG+   +++
Sbjct: 431 HLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMID 489

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +  + G + +A+R    IP D G   WSA++G    HG  + A++   ++L+
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 41/438 (9%)

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF- 255
           +  +   LK C        G+ LH   IK  + +   +    + +Y+KC  +  AR +F 
Sbjct: 8   LHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67

Query: 256 HL------------------------------MPEKNLIAWNIVISGHLQNGGDMEAASL 285
           H                               MP+ + +++N +I+ + + G    A  L
Sbjct: 68  HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M    +  D  TLS ++ +      +G+ +Q+HALSV T  +S   + N+LI +Y K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 346 CGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
            G +++A +IF   S   D V+  SM+ AY Q   G +AL+LYLEM  R +  D F  +S
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS-IDDADRAFSEIPDR 463
           +L A  N+     G Q H  +IK G+  ++  G+ L+++Y+KCG  + D  + F EI + 
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 464 GIVSWSAMIGGLAQH-GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
            +V W+ MI G + +     EAL+ F Q+   G  P+  +LV V+ AC++    ++ +  
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI- 580
           H  +++       +  + A +I +  + G  ++A  L DTMP     S    + G A+  
Sbjct: 366 HGLALKLDIPSNRISVNNA-LIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424

Query: 581 --YKNVEVGQHAAEMLFA 596
             ++++ + Q   EM F 
Sbjct: 425 MGFQSLHLFQRMLEMGFT 442



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 161/289 (55%), Gaps = 8/289 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN-FIDSRRLFDAIPER 59
           VL A T+ +DL  GLQ H  ++ +G+  +  V + L+ +Y+KCG   +D R++FD I   
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 60  SVVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +V WN++ S Y ++ D  +EA+  F+++ + G RP++ SL  +I+AC+       GR++
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 119 HGYSIKLGYDSDMFSA-NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           HG ++KL   S+  S  NAL+ MY+K GNL DA  +F  +   + VS+N++IAG   H  
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG-- 235
              +L LFQ+M      P   T+ S L ACA     E G+ ++ +++K +   +P  G  
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHF 484

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAA 283
             ++D+  + G + EA  +   +P +     W+ ++ G  +  G++E A
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALL-GACRIHGNVELA 532



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 3/186 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V+ AC++      G QVHG+ +     S+   V N+L+ MY+KCGN  D++ LFD +PE 
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEH 408

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR-KI 118
           + VS+NS+ + Y       +++  F+ M+  G  P   +  S++ ACA +G    G+   
Sbjct: 409 NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYF 468

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           +    K G + +    + ++D+  + G L +A  + + I   P    W+A++  C +H +
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGN 528

Query: 178 NDWALK 183
            + A+K
Sbjct: 529 VELAIK 534


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/655 (39%), Positives = 385/655 (58%), Gaps = 33/655 (5%)

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A++VF  I+ P+ + WN ++ G  L      ALKL+  M S  + PN +T+   LK+CA 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL------------ 257
            +  E G+Q+H  ++K+  + D  V   L+ MYA+ G +++A  +F              
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 258 -------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
                              +P K++++WN +ISG+ + G   EA  LF  M +  V  D+
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+ TVL + A  +++ + +QVH+      F S+  IVN+LID Y KCG VE A  +F+ 
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S  D+V+  ++I  Y    L +EAL L+ EM     +P+     S+L ACA+L A + G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 419 KQVHVHIIKF--GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           + +HV+I K      +      SL++MYAKCG I+ A + F+ +  + + SW+AMI G A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HGR      +F +M ++G+ P+ IT V +L AC+H+G +   +H F+SM + + I P  
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKL 438

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHY CMID+LG +G F+EA E++ TMP + +  +W +LL A R + N+E+ +  A  L  
Sbjct: 439 EHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMK 498

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EPE   ++VLLSNIYA+AG WD VAKVR  +    +KK PG S IE+  +V+ F VGD+
Sbjct: 499 VEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDK 558

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
            H R++EIY  L+E+  LL +AG+VP     L ++EE  KE  L HHSEKLA+AFGLI+T
Sbjct: 559 LHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 618

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            PG  + + KNLR+C +CH + + +SKI  REII RD  RFHHFR+G CSC  +W
Sbjct: 619 KPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 234/502 (46%), Gaps = 75/502 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK------------------ 42
           +LK+C   K    G Q+HG V+  G++ D +V  SL+ MYA+                  
Sbjct: 72  LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 43  -------------CGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                         GN   ++ +FD IP + VVSWN++ S Y      +EA+  FKEM+ 
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + +RP+E ++ ++++ACA S    LGR++H +    G+ S++   NAL+D+Y+K G +E 
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ +   D+VSWN +I G         AL LFQ+M  S  +PN  T  S L ACA 
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311

Query: 210 MELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K   ++ + P +   L+DMYAKCG ++ A  +F+ M  K+L +WN
Sbjct: 312 LGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 371

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G       LF  M + G+  D  T   +L + +    + + + +       
Sbjct: 372 AMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI------- 424

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F+S   DY +   ++ YG                         MI      GL +EA +
Sbjct: 425 -FKSMTQDYDITPKLEHYG------------------------CMIDLLGHSGLFKEAKE 459

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNM 443
           +   M    + PD  +  SLL AC      E  +    +++K   +     G+   L N+
Sbjct: 460 MIKTMP---MEPDGVIWCSLLKACRRHGNLELAESFARNLMK---VEPENPGSYVLLSNI 513

Query: 444 YAKCGSIDDADRAFSEIPDRGI 465
           YA  G  D+  +  + +  +G+
Sbjct: 514 YATAGEWDEVAKVRALLNGKGM 535



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 236/541 (43%), Gaps = 70/541 (12%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F  I E + + WN++   Y        A+  +  M+  G+ PN ++   ++ +CA S  
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------ 159
              G++IHG+ +KLGY+ D++   +L+ MYA+ G LEDA  VF    H            
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 160 -------------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                               D+VSWNA+I+G         AL+LF++M  + + P+  T 
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + L ACA     ELGRQ+H  +      S+  +   L+D+Y+KCG ++ A  +F  +  
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++++WN +I G+       EA  LF  M R G   +  T+ ++L + A   AI + + +
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321

Query: 321 HALSVKTAFESDD--YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           H    K   +  +   +  SLID Y KCG +E A ++F       L +  +MI  +A  G
Sbjct: 322 HVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
                  L+  M+   I PD      LL+AC++    + G+ +      F  M+  +   
Sbjct: 382 RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI------FKSMTQDYDIT 435

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
             +  Y                          MI  L   G  KEA +M   M  +   P
Sbjct: 436 PKLEHYG------------------------CMIDLLGHSGLFKEAKEMIKTMPME---P 468

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAGKFQEAME 557
           + +   S+L AC   G +  A+    ++ K   ++P     Y  + +I   AG++ E  +
Sbjct: 469 DGVIWCSLLKACRRHGNLELAESFARNLMK---VEPENPGSYVLLSNIYATAGEWDEVAK 525

Query: 558 L 558
           +
Sbjct: 526 V 526


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/677 (37%), Positives = 387/677 (57%), Gaps = 4/677 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS---DMFSANALVDMYAKVGNLEDAVAVFK 155
           L+ ++  CA S     G  IHG+ I     S   D++  N+L+++Y K G    A  VF 
Sbjct: 34  LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKE 214
            +   ++VSW A++ G      +   LKLF+ M  S E  PN F  T   K+C+     E
Sbjct: 94  LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G+Q H   +K  + S   V   LV MY+ C    EA  +   +P  +L  ++  +SG+L
Sbjct: 154 EGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           + G   E A +   M +E +  D  T  + L+  ++ + + + +Q+H+  V+  F S+  
Sbjct: 214 ECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVE 273

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
              ++I+ YGKCG V  A ++F  + A ++V  T+++ AY Q    EEAL L+ +M  +E
Sbjct: 274 ASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           + P+ +  +  LN+ A LS  + G  +H  ++K G+ +    GN+LVNMYAK GSI+DA 
Sbjct: 334 VPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           +AFS +  R IV+W+ MI G + HG G+E L+ F +M+  G +PN IT + VL AC+H G
Sbjct: 394 KAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVG 453

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
            V +  ++F  + KKF +QP  +HY C++ +L +AG F++A + + T P + +   W AL
Sbjct: 454 FVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRAL 513

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           L A  + +N  +G+  AE      P  S  +VLLSNI+A +  W+ VA+VR  M    +K
Sbjct: 514 LNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVK 573

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           KEPG+SWI ++++ + F   +  H     IYAK+ EV   +   GY P V    HDV+E 
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEE 633

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           ++E  L +HSEKLAVA+GL+ TP  + + V KN+RIC DCH++ + ISKI  R I++RD 
Sbjct: 634 QREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDS 693

Query: 755 NRFHHFRNGSCSCGGYW 771
           NRFHHFR+G CSC  YW
Sbjct: 694 NRFHHFRDGQCSCCDYW 710



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 238/480 (49%), Gaps = 6/480 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS---DEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +LK C +   L  G  +HG ++ T   S   D +  NSL+ +Y KCG  + +R++FD +P
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGR 116
           ER+VVSW ++   Y +  F  E +  FK MV S   RPNEF  + +  +C+ SG    G+
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           + HG  +K G  S  F  N LV MY+      +A+ V  D+ + D+  +++ ++G +   
Sbjct: 157 QFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
                 ++ ++M   ++  +  TY S L+ C+ +    L RQ+H  ++++   S+     
Sbjct: 217 AFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASG 276

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            +++MY KCG +  A+ +F     +N++    ++  + Q+    EA +LF  M  + V  
Sbjct: 277 AIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++ T +  L S+A    +     +H L +K+ + +   + N+L++ Y K G +EDA K F
Sbjct: 337 NEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              +  D+V   +MI  ++  GLG E L+ +  M      P+      +L AC+++   E
Sbjct: 397 SGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVE 456

Query: 417 QGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           QG      ++ KF    D      +V + +K G   DA+      P +  +V+W A++  
Sbjct: 457 QGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNA 516


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/693 (37%), Positives = 404/693 (58%), Gaps = 4/693 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL A  S + L  GL VH   +  G +S+ +V +SL+ MYAKC     ++++FDA+ ER+
Sbjct: 355  VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V WN++   Y    +  + +  F EM   G  P+EF+ +S+++ACA      +GR++H 
Sbjct: 415  LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + IK  ++ ++F  N LVDMYAK G LE+A   F+ I + D VSWNA+I G V  E  D 
Sbjct: 475  FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A  +F++M    I P+  +  S L  CA ++  E G Q+HC L+K  +++    G  L+D
Sbjct: 535  AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLID 594

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY KCG+++ AR +F  MP +++++ N +I+G+ QN   +EA  LF  M  EG+   + T
Sbjct: 595  MYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEIT 653

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKE- 358
             +++L +      + + +Q+H L  K     D D++  SL+  Y       DA  +F E 
Sbjct: 654  FASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEF 713

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                  +  T++I+ + Q G  EEAL+LY EM      PD    +S+L AC+ L++   G
Sbjct: 714  QYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG 773

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQ 477
            + +H  I   G  SD   G+++V+MYAKCG +  + + F E+  +  ++SW++MI G A+
Sbjct: 774  RMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAK 833

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G  + AL++F +M    + P+ +T + VL AC+HAG V+E +  F+ M   + I P  +
Sbjct: 834  NGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLD 893

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            H ACMID+LGR G  +EA E +D + F+ NA +W  LLGA RI+ +   G+ AAE L  +
Sbjct: 894  HCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIEL 953

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EPE SS +VLLSNIYA++G WD V  VRR M++  L+K PG SWI V  K   F  GD+ 
Sbjct: 954  EPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKF 1013

Query: 658  HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
            H  + EI+A L ++  L+ + GY+   ++ L D
Sbjct: 1014 HPSAGEIHALLKDLIALMKEDGYIAETDSLLED 1046



 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 186/564 (32%), Positives = 306/564 (54%), Gaps = 38/564 (6%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H   +  GF S   + +++V +YAKCGN   + + F+ + +R +++WNS+ S Y     
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           LE+ +  F  +   G+ PN+F+ + ++++CA   D  LG+++H   IK+G++ + F   +
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+DMY+K G+L DA  +F  +  PD VSW A+IAG V     + ALK+F+ M+   + P+
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
              + + + AC G+                                   G +D+A  +F 
Sbjct: 283 QVAFVTVITACVGL-----------------------------------GRLDDACDLFV 307

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP  N++AWN++ISGH++ G D+EA   F  M++ GV   ++TL +VL ++AS +A+  
Sbjct: 308 QMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNY 367

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
              VHA ++K    S+ Y+ +SLI+ Y KC  +E A K+F      +LV   +M+  YAQ
Sbjct: 368 GLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQ 427

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G   + +KL+ EM+     PD F  +S+L+ACA L   E G+Q+H  IIK  F  + F 
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFV 487

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            N+LV+MYAKCG++++A + F  I +R  VSW+A+I G  Q     EA  MF +M+ DG+
Sbjct: 488 ENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGI 547

Query: 497 LPNHITLVSVLCACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
            P+ ++L S+L  C  A L A E          K G+Q      + +ID+  + G  + A
Sbjct: 548 APDEVSLASILSGC--ANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAA 605

Query: 556 MELVDTMPFQANASVWGALLGAAR 579
             +   MP ++  S+   + G A+
Sbjct: 606 RYVFSCMPSRSVVSMNAIIAGYAQ 629



 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 171/513 (33%), Positives = 280/513 (54%), Gaps = 40/513 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C    D+ LG QVH  V+  GF+ + F   SL+ MY+KCG+ +D+R++FDA+ +  
Sbjct: 188 VLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPD 247

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ + YV     EEA+  F++M   G+ P++ +  ++I AC G            
Sbjct: 248 TVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVG------------ 295

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                  +G L+DA  +F  + + ++V+WN +I+G V    +  
Sbjct: 296 -----------------------LGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIE 332

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F+ M  + +     T  S L A A +E    G  +H   IK  + S+  VG  L++
Sbjct: 333 AIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLIN 392

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF--DQ 298
           MYAKC  M+ A+ +F  + E+NL+ WN ++ G+ QNG   +   LF  M   G GF  D+
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEM--RGCGFWPDE 450

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T +++L + A  + + + +Q+H+  +K  FE + ++ N+L+D Y KCG +E+A + F+ 
Sbjct: 451 FTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEF 510

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D V+  ++I  Y Q    +EA  ++  M    I PD    +S+L+ CANL A EQG
Sbjct: 511 IRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQG 570

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +QVH  ++K G  +  +AG+SL++MY KCG+I+ A   FS +P R +VS +A+I G AQ+
Sbjct: 571 EQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN 630

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
               EA+ +F +M  +G+ P+ IT  S+L AC 
Sbjct: 631 DL-VEAIDLFQEMQNEGLNPSEITFASLLDACT 662



 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 182/572 (31%), Positives = 309/572 (54%), Gaps = 13/572 (2%)

Query: 13  LGLQVHGIVVFT-----GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSL 67
           +GL    + VF      G   D+    +++      G   D+  LF  +P  +VV+WN +
Sbjct: 261 VGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVM 320

Query: 68  FSCYVH--CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
            S +V   CD   EA+ FFK M  +G++    +L S+++A A       G  +H  +IK 
Sbjct: 321 ISGHVKRGCDI--EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQ 378

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           G +S+++  ++L++MYAK   +E A  VF  ++  ++V WNA++ G   + +    +KLF
Sbjct: 379 GLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLF 438

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            +M+     P+ FTYTS L ACA +E  E+GRQLH  +IK   + +  V   LVDMYAKC
Sbjct: 439 SEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKC 498

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G+++EAR  F  +  ++ ++WN +I G++Q   + EA ++F  M  +G+  D+ +L+++L
Sbjct: 499 GALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASIL 558

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
              A+ QA+   +QVH   VK+  ++  Y  +SLID Y KCG +E A  +F    +  +V
Sbjct: 559 SGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVV 618

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           +  ++I  YAQ  L  EA+ L+ EMQ+  +NP     +SLL+AC        G+Q+H  I
Sbjct: 619 SMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLI 677

Query: 426 IKFGFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKE 483
            K G + D  F G SL+ MY       DAD  FSE    +  + W+A+I G  Q+G  +E
Sbjct: 678 QKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEE 737

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           ALQ++ +M  +   P+  T  SVL AC+    + + +    S+    G+   +   + ++
Sbjct: 738 ALQLYQEMHRNNARPDQATFASVLRACSILASLGDGR-MIHSLIFHVGLDSDELTGSAVV 796

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           D+  + G  + ++++ + M  + +   W +++
Sbjct: 797 DMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 174/367 (47%), Gaps = 49/367 (13%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H   +K    S   +G  +VD+YAKCG+++ A   F+ + +++++AWN V+S + + 
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   +    F  +   GV  +Q T + VL S A    I + KQVH   +K  FE + +  
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            SLID Y KCG + DA KIF      D V+ T+MI  Y Q GL EEALK++ +MQ   + 
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD     +++ AC  L                                   G +DDA   
Sbjct: 281 PDQVAFVTVITACVGL-----------------------------------GRLDDACDL 305

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC------AC 510
           F ++P+  +V+W+ MI G  + G   EA+  F  M + GV     TL SVL       A 
Sbjct: 306 FVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEAL 365

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           N+  LV     H +++++  G+       + +I++  +  K + A ++ D +  + N  +
Sbjct: 366 NYGLLV-----HAQAIKQ--GLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVL 417

Query: 571 WGALLGA 577
           W A+LG 
Sbjct: 418 WNAMLGG 424



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 129/215 (60%)

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
           QA    K +HA ++K  F S   + ++++D Y KCG+VE A K F +    D++A  S++
Sbjct: 95  QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
           + Y++ G  E+ +  +  +Q+  ++P+ F  + +L++CA L   + GKQVH  +IK GF 
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            ++F   SL++MY+KCGS+ DA + F  + D   VSW+AMI G  Q G  +EAL++F  M
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM 274

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
            + G++P+ +  V+V+ AC   G + +A   F  M
Sbjct: 275 QKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/784 (33%), Positives = 428/784 (54%), Gaps = 20/784 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI----P 57
           ++A   K+DL LG   H  +   G+D D  VA SL+ MY+ CG    + + FD      P
Sbjct: 171 VEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAP 230

Query: 58  ERSVVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
              VVSW  + + C  H D++  A+  F  M   G+ P+     +++++  G GD   G+
Sbjct: 231 SSDVVSWTKILAACNEHRDYIG-ALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGK 289

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI-AGCVLH 175
           +IH   +    + D     A+V MYA++G+++DA   F  I+ P + +W  ++ A C L 
Sbjct: 290 RIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLG 349

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS---DP 232
             N   +++ ++M++  + PN  T+ + L  C  + L++ G+++     + + +S     
Sbjct: 350 SFNS-VMQILERMEAEGVKPNEVTFITILDTCKNLALED-GKKIQALASEQQQRSLDASA 407

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +G  ++ M+++  SM  AR  F  + +K++ A+  +I+G+  N    EA ++F  M R 
Sbjct: 408 RIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRR 467

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  D   L+  + + AS   +   K +H  ++      DD +  +L+D Y +CG +EDA
Sbjct: 468 RVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDA 527

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F E    D VA ++MI A  + G    A+ +   MQ     P       +L ACA+ 
Sbjct: 528 SAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHA 587

Query: 413 SAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
              E+  ++VH  ++  GF SD     +++ MYAK GSI +A  AF +I +  + +W+ M
Sbjct: 588 GMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTM 647

Query: 472 IGG---LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           +     L ++     AL++   M +DGV+P+ +T V +L AC + G + EA  +F+ M+ 
Sbjct: 648 LEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKF 707

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
            +G+ P  EHY  ++D + R G  QEA +L+  +P Q N  +W ALL   +   +    Q
Sbjct: 708 DYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQ 767

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
              E++  I    +    L +  +  A  W+   +VR+ M D  +KKEPG S I +K+ V
Sbjct: 768 RVGEIIMKI---NNKLDPLGTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTV 824

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F  GDRSH  ++EIYA++D ++ L+ K GY+P     LHDV E +KE+LL++HSE+LA
Sbjct: 825 HGFVAGDRSHPHTREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLA 884

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSC 767
           +A+G + TPPG  +RV KNLR+C DCHT+ +  +K++ REIIVRD  RFHHF ++G+CSC
Sbjct: 885 MAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSC 944

Query: 768 GGYW 771
           G YW
Sbjct: 945 GDYW 948



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 173/586 (29%), Positives = 292/586 (49%), Gaps = 13/586 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ CT  + +  G +VH  +  +  +++ FV N LV MYA  GN  ++RR+FD +   +
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+S+ ++   YV     +EA+       L   + +   L+  + A     D  LGR  H 
Sbjct: 129 VLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHD 188

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHP--DIVSWNAVIAGCVLHE 176
              + GYD D   A +L+ MY+  G +E AV  F    +  P  D+VSW  ++A C  +E
Sbjct: 189 TIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAAC--NE 246

Query: 177 HNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           H D+  AL LF +M+   + P+   + + L +  G+     G+++H  ++  E++ D +V
Sbjct: 247 HRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMV 306

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  +V MYA+ GS+ +A   F  + +  + AW +++  + + G       +   M  EGV
Sbjct: 307 GTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGV 366

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD---YIVNSLIDAYGKCGHVED 351
             ++ T  T+L +  +  A+   K++ AL+ +    S D    I  ++I  + +   +  
Sbjct: 367 KPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A + F + S   + A T+MI  YA      EAL ++ EM  R +  D+ V +  ++ACA+
Sbjct: 426 AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           +   E+GK +H   +  G   D     +LV+MY++CGS++DA   F EI     V+WSAM
Sbjct: 486 IPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAM 545

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I  L +HG  + A+ M  +M +DG  P+  T+V VL AC HAG++ EA     S+    G
Sbjct: 546 IAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGG 605

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                E    ++ +  + G  QEA    D +    +   W  +L A
Sbjct: 606 FDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEA 650



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 167/339 (49%), Gaps = 5/339 (1%)

Query: 182 LKLFQQMKSSEINP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           L+ F ++  +   P ++ +Y   L+ C  +     G ++H  + +  ++++  VG  LV 
Sbjct: 47  LQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVF 106

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYA  G+  EAR IF  +   N++++  ++  ++  G   EA  +      +    D + 
Sbjct: 107 MYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSM 166

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--- 357
           L+  +++    + + + +  H    +  ++ D  +  SLI  Y  CG +E AV+ F    
Sbjct: 167 LAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAF 226

Query: 358 -ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
             + + D+V+ T ++ A  +      AL L+  M+++ + PD     ++L++   L    
Sbjct: 227 LRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIA 286

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QGK++H  ++      D+  G ++V MYA+ GSI DA RAF  I   G+ +W+ ++G   
Sbjct: 287 QGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYC 346

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
           + G     +Q+  +M  +GV PN +T +++L  C +  L
Sbjct: 347 RLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLAL 385



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 8/287 (2%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           FD  +   VL+     +A+    +VH    ++  E++ ++ N L+  Y   G+  +A +I
Sbjct: 61  FDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRI 120

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F    + ++++ T+++ AY   G  +EALK+    + +    D  + +  + A       
Sbjct: 121 FDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDL 180

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA----DRAFSEIPDRGIVSWSAM 471
             G+  H  I + G+  D     SL+ MY+ CG I+ A    DRAF   P   +VSW+ +
Sbjct: 181 SLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKI 240

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKF 530
           +    +H     AL +F +M E GV+P+ I  V+VL +    G +A+ K  H   ++++ 
Sbjct: 241 LAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDREL 300

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               M      ++ +  R G  Q+A    D +  Q   + W  L+GA
Sbjct: 301 ERDSMVG--TAVVKMYARIGSIQDACRAFDRID-QPGVAAWTVLVGA 344


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/784 (33%), Positives = 428/784 (54%), Gaps = 20/784 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI----P 57
           ++A   K+DL LG   H  +   G+D D  VA SL+ MY+ CG    + + FD      P
Sbjct: 171 VEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAP 230

Query: 58  ERSVVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
              VVSW  + + C  H D++  A+  F  M   G+ P+     +++++  G GD   G+
Sbjct: 231 SSDVVSWTKILAACNEHRDYIG-ALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGK 289

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI-AGCVLH 175
           +IH   +    + D     A+V MYA++G+++DA   F  I+ P + +W  +I A C L 
Sbjct: 290 RIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLG 349

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS---DP 232
             N   +++ ++M++  + PN  T+ + L  C  + L++ G+++     + + +S     
Sbjct: 350 SFNS-VMQILERMEAEGVKPNEVTFITILDTCKNLALED-GKKIQALASEQQQRSLDASA 407

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +G  ++ M+++  SM  AR  F  + +K++ A+  +I+G+  N    EA ++F  M R 
Sbjct: 408 RIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRR 467

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            V  D   L+  + + AS   +   K +H  ++      DD +  +L+D Y +CG +EDA
Sbjct: 468 RVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDA 527

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F E    D +A ++MI A  + G    A+ +   MQ     P       +L ACA+ 
Sbjct: 528 SAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHA 587

Query: 413 SAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
              E+  ++VH  ++  GF SD     +++ MYAK GSI +A  AF +I +  + +W+ M
Sbjct: 588 GMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTM 647

Query: 472 IGG---LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           +     L ++     AL++   M +DGV+P+ +T V +L AC + G + EA  +F+ M+ 
Sbjct: 648 LEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKF 707

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
            +G+ P  EHY  ++D + R G  QEA +L+  +P Q N  +W ALL   +   +    Q
Sbjct: 708 DYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQ 767

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
              E++  I    +    L +  +  A  W+   +VR+ M D  +KKEPG S I +K+ V
Sbjct: 768 RVGEIIMKI---NNKLDPLGTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTV 824

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F  GDRSH  ++EIYA++D ++ L+ K GY+P     LHDV E +KE+LL++HSE+LA
Sbjct: 825 HGFVAGDRSHPHTREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLA 884

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSC 767
           +A+G + TPPG  +RV KNLR+C DCHT+ +  +K++ REIIVRD  RFHHF ++G+CSC
Sbjct: 885 MAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSC 944

Query: 768 GGYW 771
           G YW
Sbjct: 945 GDYW 948



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 291/586 (49%), Gaps = 13/586 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ CT  + +  G +VH  +  +  +++ FV N LV MYA  GN  ++RR+FD +   +
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++S+ ++   YV     +EA+       L   + +   L+  + A     D  LGR  H 
Sbjct: 129 ILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHD 188

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHP--DIVSWNAVIAGCVLHE 176
              + GYD D   A +L+ MY+  G +E AV  F    +  P  D+VSW  ++A C  +E
Sbjct: 189 TIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAAC--NE 246

Query: 177 HNDW--ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           H D+  AL LF +M+   + P+   + + L +  G+     G+++H  ++  E++ D ++
Sbjct: 247 HRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMI 306

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  +V MYA+ GS+ +A   F  + +  + AW ++I  + + G       +   M  EGV
Sbjct: 307 GTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGV 366

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD---YIVNSLIDAYGKCGHVED 351
             ++ T  T+L +  +  A+   K++ AL+ +    S D    I  ++I  + +   +  
Sbjct: 367 KPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A + F + S   + A T+MI  YA      EAL ++ EM  R +  D+ V +  ++ACA+
Sbjct: 426 AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           +   E+GK +H   +  G   D     +LV+MY++CGS++DA   F EI     ++WSAM
Sbjct: 486 IPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAM 545

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I  L +HG  + A+ M  +M +DG  P   T+V VL AC HAG++ EA     S+    G
Sbjct: 546 IAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGG 605

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                E    ++ +  + G  QEA    D +    +   W  +L A
Sbjct: 606 FDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEA 650



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 166/339 (48%), Gaps = 5/339 (1%)

Query: 182 LKLFQQMKSSEINP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           L+ F ++  +   P ++ +Y   L+ C  +     G ++H  + +  ++++  VG  LV 
Sbjct: 47  LQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVF 106

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYA  G+  EAR IF  +   N++++  ++  ++  G   EA  +      +    D   
Sbjct: 107 MYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPM 166

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--- 357
           L+  +++    + + + +  H    +  ++ D  +  SLI  Y  CG +E AV+ F    
Sbjct: 167 LAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAF 226

Query: 358 -ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
             + + D+V+ T ++ A  +      AL L+  M+++ + PD     ++L++   L    
Sbjct: 227 LRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIA 286

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QGK++H  ++      D+  G ++V MYA+ GSI DA RAF  I   G+ +W+ +IG   
Sbjct: 287 QGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYC 346

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
           + G     +Q+  +M  +GV PN +T +++L  C +  L
Sbjct: 347 RLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLAL 385



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 8/287 (2%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           FD  +   VL+     +A+    +VH    ++  E++ ++ N L+  Y   G+  +A +I
Sbjct: 61  FDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRI 120

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F    + ++++ T+++ AY   G  +EALK+    + +    D  + +  + A       
Sbjct: 121 FDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDL 180

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA----DRAFSEIPDRGIVSWSAM 471
             G+  H  I + G+  D     SL+ MY+ CG I+ A    DRAF   P   +VSW+ +
Sbjct: 181 SLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKI 240

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKF 530
           +    +H     AL +F +M E GV+P+ I  V+VL +    G +A+ K  H   ++++ 
Sbjct: 241 LAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDREL 300

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               M      ++ +  R G  Q+A    D +  Q   + W  L+GA
Sbjct: 301 ERDSMIG--TAVVKMYARIGSIQDACRAFDRID-QPGVAAWTVLIGA 344


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/713 (37%), Positives = 405/713 (56%), Gaps = 19/713 (2%)

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
            C    EA+ F +E    G +        ++  C         +KIH + +K G   D F
Sbjct: 50  RCLDFREALSFIRE----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAF 105

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
               LV++YAK G +E A  VF ++   ++VSW  ++ G V     + A+++F++M  + 
Sbjct: 106 LMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAG 165

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             P  +T  +AL A + +  KELG+Q+H   IK  I+ D  +G  L  +Y+KCGS++ A 
Sbjct: 166 AYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAV 225

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
             F  + +KN+I+W  VIS    NG        F  M  E V  ++ TL++ L      Q
Sbjct: 226 KAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQ 285

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           ++ +  Q+H+L++K  FES+  I NS++  Y KCG + +A K+F E   + LV   +MI 
Sbjct: 286 SLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIA 345

Query: 373 AYAQF-----------GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            +A+              G EAL ++L++    + PD F  SS+L+ C++L A EQG+QV
Sbjct: 346 GHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQV 405

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   IK GF+SD   G +LVNMY KCGSI+ A +AF E+  R ++SW++MI G AQ+G+ 
Sbjct: 406 HAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQP 465

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           ++AL +F  M   GV PN IT V VL AC+HAG+V EA  +F+ M+ ++ I P+ +HYAC
Sbjct: 466 QQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYAC 525

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           +ID+  R G+  EA + +  M  + N  +W  L+   R    +E+G +AAE L  ++P+ 
Sbjct: 526 LIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKD 585

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           + T+ LL N+Y SAG W  V++VR+ MK+ KL +    SWI +KDK+Y+F    RSHA+S
Sbjct: 586 TETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQS 645

Query: 662 KEIYAKLDEVSDLLNKAGY--VPMVETDLHDVEESEKEQL--LYHHSEKLAVAFGLIATP 717
            E+Y  L  + +     GY     +E    + +  E++ L  + +HSEKLA+AFGL+ T 
Sbjct: 646 GEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTS 705

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
               IRV K++ +C DCH     IS + +REII+RD  R H F NG CSCG +
Sbjct: 706 NAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 167/497 (33%), Positives = 270/497 (54%), Gaps = 21/497 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  KK +    ++H  +V TG   D F+   LV +YAKCG    +R++FD +P R+
Sbjct: 75  ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRN 134

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW +L + YVH    E AV  F+EM+ +G  P  ++L + ++A +      LG++IHG
Sbjct: 135 VVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHG 194

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           YSIK   + D    N+L  +Y+K G+LE AV  F+ I   +++SW  VI+    +     
Sbjct: 195 YSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAAT 254

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+ F +M S  + PN FT TSAL  C  M+  ++G Q+H   IK+  +S+  +   ++ 
Sbjct: 255 GLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMY 314

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPWM 289
           +Y KCG + EA+ +F  M   +L+ WN +I+GH +           +    EA S+F  +
Sbjct: 315 LYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKL 374

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            R G+  D  T S+VL   +S  A+   +QVHA ++KT F SD  +  +L++ Y KCG +
Sbjct: 375 NRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSI 434

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           E A K F E S   L++ TSMIT YAQ G  ++AL L+ +M+   + P+      +L+AC
Sbjct: 435 ERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSAC 494

Query: 410 ANLSAYEQGK---QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDR 463
           ++    ++     Q+  +  K   + D +A   L++M+ + G +D+A     E+   P+ 
Sbjct: 495 SHAGMVDEALDYFQMMKNEYKITPVMDHYA--CLIDMFVRLGRLDEAFDFIKEMDLEPNE 552

Query: 464 GIVSWSAMIGGLAQHGR 480
            I  WS +I G    G+
Sbjct: 553 FI--WSILIAGCRSQGK 567


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/514 (46%), Positives = 330/514 (64%), Gaps = 31/514 (6%)

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M  +GV  +Q TLSTV+K+ AS  ++   KQ H   +K  FESD  +  +L+  Y +CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 349 VEDA-------------------------------VKIFKESSAVDLVACTSMITAYAQF 377
           +EDA                               +K+F E S  D+V+ T++I  YAQ 
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G G+E+L ++ +M+   +  D F+  S+L+ACA+L+A E G+Q H ++++ GF  D   G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           ++LV+MYAK GS++DA + F ++P R  VSW+++I G AQHGRG +A+ +F QML+ G+ 
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           PN I+ V VL AC+H GLV E + +F  M + +GI P   HY CMID+LGRAG   EA  
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            ++ MP + + SVWGALLGA RI+ N E+ +  AE L  +E + +  +VLLSNIYA+AG 
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           WD+ AKVR+ MKD  + K+PG SWIEVK  ++ F  G+ SH + KEI+  L+ +S  +  
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGYVP     L DVE+ EKE  L HHSEKLA+AFG+I T PG TIRV KNLR+C DCHT 
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +FIS   +R+I+VRD NRFHHF++G CSCG YW
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 209/462 (45%), Gaps = 85/462 (18%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           MV  G++PN+F+LS+++ ACA       G++ H Y IK+G++SD+    ALV MYA+ G+
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 147 LEDA-------------------------------VAVFKDIEHPDIVSWNAVIAGCVLH 175
           LEDA                               + +F ++   D+VSW AVIAG   +
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            + D +L +F QM+ + +  + F   S L ACA +   ELGRQ H  +++     D +VG
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LVDMYAK GSM++A  +F  MP++N ++WN +I+G  Q+G   +A  LF  M + G+ 
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            ++ +   VL +         C     ++     E   Y  N +   YG           
Sbjct: 241 PNEISFVGVLSA---------CSHTGLVN-----EGRGYF-NLMTQNYG----------- 274

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
                  D+   T MI    + G  +EA      M    + PD  V  +LL AC      
Sbjct: 275 ----IVPDVSHYTCMIDLLGRAGCLDEAENFINGM---PVEPDVSVWGALLGACRIHGNT 327

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGIV-----SW 468
           E  K++  H++    M    AG    L N+YA  G  DDA +    + DRG++     SW
Sbjct: 328 ELAKRIAEHLLG---MEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSW 384

Query: 469 -------SAMIGGLAQHGRGKEALQMF----GQMLEDGVLPN 499
                   A + G   H + KE  +       +M   G +PN
Sbjct: 385 IEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPN 426



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 35/304 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC S   L  G Q H  ++  GF+SD  V  +LV MYA+CG+  D+  +FD + ERS
Sbjct: 16  VVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERS 75

Query: 61  -------------------------------VVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                          VVSW ++ + Y    + +E++  F +M  
Sbjct: 76  TRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRK 135

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +G++ + F + S+++ACA      LGR+ H Y ++ G+  D+   +ALVDMYAK G++ED
Sbjct: 136 TGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMED 195

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF  +   + VSWN++I GC  H   + A+ LF+QM  + I PN  ++   L AC+ 
Sbjct: 196 ACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSH 255

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAW 266
             L   GR  + +L+       P V     ++D+  + G +DEA    + MP E ++  W
Sbjct: 256 TGLVNEGRG-YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVW 314

Query: 267 NIVI 270
             ++
Sbjct: 315 GALL 318


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/691 (36%), Positives = 394/691 (57%), Gaps = 46/691 (6%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI---- 157
           +++  A  GD   GR++     K     +++  N +V  YAK+G+ ++++ +FK +    
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG 195

Query: 158 ---EHP-------------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYT 201
              + P             D++SWN++I+G V +   +  L++++QM    I+ ++ T  
Sbjct: 196 IEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATII 255

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           S L  CA      LG+ +H   IK   +        L+DMY+KCG +D A  +F  M E+
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 315

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           N+++W  +I+G+ ++G    A  L   M +EGV  D    +++L + A   ++   K VH
Sbjct: 316 NVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVH 375

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
                   ES+ ++ N+L+D Y KCG ++ A  +F      D+++  +MI          
Sbjct: 376 DYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG--------- 426

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
                       E+ PDS   + +L ACA+LSA E+GK++H +I++ G+ SD    N+LV
Sbjct: 427 ------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           ++Y KCG +  A   F  IP + +VSW+ MI G   HG G EA+  F +M + G+ P+ +
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           + +S+L AC+H+GL+ +    F  M+  F I+P  EHYACM+D+L R G   +A E ++T
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIET 594

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           +P   +A++WGALL   RIY ++E+ +  AE +F +EPE +  +VLL+NIYA A  W+ V
Sbjct: 595 LPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 654

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR-SHARSKEIYAKLDEVSDLLNKAGY 680
            ++R  +    L+K PG SWIE+K KV  F  G+  SH  SK+I + L ++   + + GY
Sbjct: 655 KRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGY 714

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
            P  +  L + +E +KE  L  HSEKLA+AFGL+A PP  T+RV KNLR+C DCH   +F
Sbjct: 715 FPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKF 774

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +SK   REI++RD NRFHHF+NG CSC G+W
Sbjct: 775 MSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 289/609 (47%), Gaps = 86/609 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K L  G +VH I+       DE +   LV +YA CG+  + RR+FD + +++
Sbjct: 105 VLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKN 164

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI---RPNE-------------FSLSSMIN 104
           V  WN + S Y      +E++C FK MV  GI   RP                S +SMI+
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224

Query: 105 A-----------------------------------CAGSGDSLLGRKIHGYSIKLGYDS 129
                                               CA SG   LG+ +H  +IK  ++ 
Sbjct: 225 GYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFER 284

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            +  +N L+DMY+K G+L+ A+ VF+ +   ++VSW ++IAG      +D A++L QQM+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQME 344

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +  ++   TS L ACA     + G+ +H  +    ++S+  V   L+DMY KCGSMD
Sbjct: 345 KEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMD 404

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M  K++I+WN +I       G+++               D  T++ +L + A
Sbjct: 405 GANSVFSTMVVKDIISWNTMI-------GELKP--------------DSRTMACILPACA 443

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  A+   K++H   ++  + SD ++ N+L+D Y KCG +  A  +F    + DLV+ T 
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI+ Y   G G EA+  + EM+D  I PD     S+L AC++    EQG +   +I+K  
Sbjct: 504 MISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIMKND 562

Query: 430 FMSDTFAGN--SLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEA 484
           F  +    +   +V++ ++ G++  A      +   PD  I  W A++ G   +   + A
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATI--WGALLCGCRIYHDIELA 620

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-MI 543
            ++  ++ E   L    T   VL A  +A   AE     + M +K G + ++++  C  I
Sbjct: 621 EKVAERVFE---LEPENTGYYVLLANIYAE--AEKWEEVKRMREKIGKKGLRKNPGCSWI 675

Query: 544 DILGRAGKF 552
           +I G+   F
Sbjct: 676 EIKGKVNLF 684



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 160/378 (42%), Gaps = 68/378 (17%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +  T S+VL+  A  +++   K+VH++        D+ +   L+  Y  CG +++  ++
Sbjct: 97  LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156

Query: 356 ------------------------FKESSAV---------------------------DL 364
                                   FKES  +                           D+
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           ++  SMI+ Y   GL E  L++Y +M    I+ D     S+L  CAN      GK VH  
Sbjct: 217 ISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
            IK  F       N+L++MY+KCG +D A R F ++ +R +VSW++MI G  + GR   A
Sbjct: 277 AIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHF---ESMEKKFGIQPMQEHY 539
           +++  QM ++GV  + +   S+L AC  +G +   K  H +    +ME           +
Sbjct: 337 IRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNL--------F 388

Query: 540 AC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI-YKNVEVGQHAAEMLFA 596
            C  ++D+  + G    A  +  TM  +   S W  ++G  +   + +     A   L A
Sbjct: 389 VCNALMDMYTKCGSMDGANSVFSTMVVKDIIS-WNTMIGELKPDSRTMACILPACASLSA 447

Query: 597 IEPEKSSTHVLLSNIYAS 614
           +E  K     +L N Y+S
Sbjct: 448 LERGKEIHGYILRNGYSS 465



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 123/319 (38%), Gaps = 62/319 (19%)

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  + Q G  E A++L    Q  E+   ++  SS+L  CA   +   GK+VH  I     
Sbjct: 73  ILHFCQLGNLENAMELVCMCQKSELETKTY--SSVLQLCAGSKSLTDGKKVHSIIKSNNV 130

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRA---------------------------------- 456
             D   G  LV++YA CG + +  R                                   
Sbjct: 131 AVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190

Query: 457 -----------------FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
                            F ++ DR ++SW++MI G   +G  +  L+++ QM+  G+  +
Sbjct: 191 MVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVD 250

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
             T++SVL  C ++G ++  K    S+  K   +        ++D+  + G    A+ + 
Sbjct: 251 LATIISVLVGCANSGTLSLGK-AVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVF 309

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY----ASA 615
           + M  + N   W +++     Y        A  +L  +E E     V+ +       A +
Sbjct: 310 EKMG-ERNVVSWTSMIAG---YTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARS 365

Query: 616 GMWDNVAKVRRFMKDNKLK 634
           G  DN   V  ++K N ++
Sbjct: 366 GSLDNGKDVHDYIKANNME 384


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/661 (39%), Positives = 389/661 (58%), Gaps = 15/661 (2%)

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           S  L    ++FS N L++ YAK   +  A  VF +I  PDIVS+N +IA           
Sbjct: 66  SFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPT 125

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+LF++++   +  + FT +  + AC   +   L RQLHC ++         V   ++  
Sbjct: 126 LRLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLAC 183

Query: 242 YAKCGSMDEARMIFHLMPE---KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           Y++ G + EAR +F  M E   ++ ++WN +I    Q+   MEA  LF  M R G+  D 
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC-GHVEDAVKIFK 357
            T+++VL +    + +   +Q H + +K+ F  + ++ + LID Y KC G + +  K+F+
Sbjct: 244 FTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFE 303

Query: 358 ESSAVDLVACTSMITAYAQF-GLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSA 414
           E +A DLV   +MI+ ++ +  L E+ L  + EMQ     PD  SFVC +  +AC+NLS+
Sbjct: 304 EITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVT--SACSNLSS 361

Query: 415 YEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
              GKQVH   IK     +  +  N+LV MY+KCG++ DA R F  +P+   VS ++MI 
Sbjct: 362 PSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIA 421

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G AQHG   E+L++F  MLE  + PN IT ++VL AC H G V E + +F  M+++F I+
Sbjct: 422 GYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIE 481

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY+CMID+LGRAGK +EA  +++TMPF   +  W  LLGA R + NVE+   AA  
Sbjct: 482 PEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANE 541

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
              +EP  ++ +V+LSN+YASA  W+  A V+R M++  +KK+PG SWIE+  KV+ F  
Sbjct: 542 FLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVA 601

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL---HDVEESEKEQLLYHHSEKLAVA 710
            D SH   KEI+  + ++   + +AGYVP +   L    +VE  E+E+ L +HSEKLAVA
Sbjct: 602 EDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVA 661

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGLI+T  G  I V KNLRIC DCH + + IS +  REI VRD +RFH F+ G CSC  Y
Sbjct: 662 FGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDY 721

Query: 771 W 771
           W
Sbjct: 722 W 722



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 269/534 (50%), Gaps = 45/534 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID------------ 48
           +LKAC +++DL  G  +H +   +      +++N   ++Y+KCG+  +            
Sbjct: 15  LLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPN 74

Query: 49  -------------------SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                              +RR+FD IP+  +VS+N+L + Y         +  F+E+  
Sbjct: 75  VFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRE 134

Query: 90  SGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             +  + F+LS +I AC   GD + L R++H + +  G+D      NA++  Y++ G L 
Sbjct: 135 LRLGLDGFTLSGVITAC---GDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191

Query: 149 DAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +A  VF+++      D VSWNA+I  C  H     A+ LF++M    +  +MFT  S L 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLI 264
           A   ++    GRQ H  +IK     +  VG GL+D+Y+KC GSM E R +F  +   +L+
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLV 311

Query: 265 AWNIVISG-HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            WN +ISG  L      +    F  M R G   D  +   V  + ++  +  + KQVHAL
Sbjct: 312 LWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHAL 371

Query: 324 SVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           ++K+    +   V N+L+  Y KCG+V DA ++F      + V+  SMI  YAQ G+  E
Sbjct: 372 AIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVE 431

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG--NSL 440
           +L+L+  M +++I P+S    ++L+AC +    E+G Q + +++K  F  +  A   + +
Sbjct: 432 SLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPEAEHYSCM 490

Query: 441 VNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +++  + G + +A+R    +P + G + W+ ++G   +HG  + A++   + L 
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLR 544



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 186/418 (44%), Gaps = 40/418 (9%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL- 257
           T+ + LKAC        G+ LH    K  I     +      +Y+KCGS+  A+  FHL 
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 258 ------------------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                                         +P+ +++++N +I+ +   G       LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            +    +G D  TLS V+   A    +G+ +Q+H   V    +    + N+++  Y + G
Sbjct: 131 EVRELRLGLDGFTLSGVI--TACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188

Query: 348 HVEDAVKIFK---ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
            + +A ++F+   E    D V+  +MI A  Q   G EA+ L+ EM  R +  D F  +S
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC-GSIDDADRAFSEIPDR 463
           +L A   +     G+Q H  +IK GF  ++  G+ L+++Y+KC GS+ +  + F EI   
Sbjct: 249 VLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAP 308

Query: 464 GIVSWSAMIGGLAQH-GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
            +V W+ MI G + +    ++ L  F +M  +G  P+  + V V  AC++    +  K  
Sbjct: 309 DLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQV 368

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           H  +++       +  + A ++ +  + G   +A  + DTMP     S+   + G A+
Sbjct: 369 HALAIKSDVPYNRVSVNNA-LVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQ 425


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/675 (37%), Positives = 384/675 (56%), Gaps = 36/675 (5%)

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           SA+ ++ +Y  +  L +A+ +FK ++ P +++W +VI           AL  F +M++S 
Sbjct: 41  SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM---- 248
             P+   + S LK+C  M     G  +H  ++++ +  D   G  L++MYAK   M    
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160

Query: 249 --------------------------------DEARMIFHLMPEKNLIAWNIVISGHLQN 276
                                           D  R +F +MP K+++++N +I+G+ Q+
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   +A  +   M    +  D  TLS+VL   + +  +   K++H   ++   +SD YI 
Sbjct: 221 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 280

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           +SL+D Y K   +ED+ ++F      D ++  S++  Y Q G   EAL+L+ +M   ++ 
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P +   SS++ ACA+L+    GKQ+H ++++ GF S+ F  ++LV+MY+KCG+I  A + 
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +     VSW+A+I G A HG G EA+ +F +M   GV PN +  V+VL AC+H GLV
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            EA  +F SM K +G+    EHYA + D+LGRAGK +EA   +  M  +   SVW  LL 
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           +  ++KN+E+ +  AE +F ++ E    +VL+ N+YAS G W  +AK+R  M+   L+K+
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           P  SWIE+K+K + F  GDRSH    +I   L  V + + K GYV      LHDV+E  K
Sbjct: 581 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 640

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
            +LL+ HSE+LAVAFG+I T PG TIRV KN+RIC DCH + +FISKI  REIIVRD +R
Sbjct: 641 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 700

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF  G+CSCG YW
Sbjct: 701 FHHFNRGNCSCGDYW 715



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 237/485 (48%), Gaps = 72/485 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK---------CGNFIDS-- 49
           VLK+CT   DL  G  VHG +V  G D D +  N+L+ MYAK          GN  D   
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP 170

Query: 50  -------------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
                                    RR+F+ +P + VVS+N++ + Y      E+A+   
Sbjct: 171 QRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMV 230

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           +EM  + ++P+ F+LSS++   +   D + G++IHGY I+ G DSD++  ++LVDMYAK 
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS 290

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
             +ED+  VF  +   D +SWN+++AG V +   + AL+LF+QM ++++ P    ++S +
Sbjct: 291 ARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            ACA +    LG+QLH  +++    S+  +   LVDMY+KCG++  AR IF  M   + +
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +W  +I GH  +G   EA SLF  M R+GV  +Q     VL +         C  V  + 
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA---------CSHVGLVD 461

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
                E+  Y  NS+   YG    +E        ++  DL+          + G  EEA 
Sbjct: 462 -----EAWGYF-NSMTKVYGLNQELEHY------AAVADLL---------GRAGKLEEAY 500

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV-NM 443
               +M    + P   V S+LL++C+     E  ++V   I  F   S+      L+ NM
Sbjct: 501 NFISKMC---VEPTGSVWSTLLSSCSVHKNLELAEKVAEKI--FTVDSENMGAYVLMCNM 555

Query: 444 YAKCG 448
           YA  G
Sbjct: 556 YASNG 560



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 233/465 (50%), Gaps = 40/465 (8%)

Query: 53  FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
           F  +    V++W S+  C+       +A+  F EM  SG  P+     S++ +C    D 
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAK---------VGNLEDAVA----------- 152
             G  +HG+ ++LG D D+++ NAL++MYAK         VGN+ D +            
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181

Query: 153 ----------------VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
                           VF+ +   D+VS+N +IAG       + AL++ ++M ++++ P+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            FT +S L   +       G+++H  +I+  I SD  +G  LVDMYAK   ++++  +F 
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +  ++ I+WN +++G++QNG   EA  LF  M    V       S+V+ + A    + +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            KQ+H   ++  F S+ +I ++L+D Y KCG+++ A KIF   + +D V+ T++I  +A 
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTF 435
            G G EA+ L+ EM+ + + P+     ++L AC+++   ++       + K +G   +  
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481

Query: 436 AGNSLVNMYAKCGSIDDADRAFSE--IPDRGIVSWSAMIGGLAQH 478
              ++ ++  + G +++A    S+  +   G V WS ++   + H
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVH 525



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 41/409 (10%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           +K    ++ K   +QLH   I+ +  S     + ++ +Y     + EA ++F  +    +
Sbjct: 12  IKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPV 70

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           +AW  VI          +A + F  M   G   D     +VLKS      +   + VH  
Sbjct: 71  LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130

Query: 324 SVKTAFESDDYIVNSLIDAYGK---------CGHVEDAV--------------------- 353
            V+   + D Y  N+L++ Y K          G+V D +                     
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190

Query: 354 ------KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
                 ++F+     D+V+  ++I  YAQ G+ E+AL++  EM   ++ PDSF  SS+L 
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
             +      +GK++H ++I+ G  SD + G+SLV+MYAK   I+D++R FS +  R  +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESM 526
           W++++ G  Q+GR  EAL++F QM+   V P  +   SV+ AC H   +   K  H   +
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
              FG        + ++D+  + G  + A ++ D M      S W A++
Sbjct: 371 RGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAII 416



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 39/247 (15%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL-IDAYGKCGHVEDAVKIF 356
           +  + T++K+    ++    KQ+HA  ++T  +S  +   S+ I  Y     + +A+ +F
Sbjct: 5   KALIKTLIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLF 62

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           K   +  ++A  S+I  +    L  +AL  ++EM+     PD  V  S+L +C  +    
Sbjct: 63  KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC---GS------------------------ 449
            G+ VH  I++ G   D + GN+L+NMYAK    GS                        
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182

Query: 450 ---------IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
                    ID   R F  +P + +VS++ +I G AQ G  ++AL+M  +M    + P+ 
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242

Query: 501 ITLVSVL 507
            TL SVL
Sbjct: 243 FTLSSVL 249


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/585 (42%), Positives = 355/585 (60%), Gaps = 1/585 (0%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+ S   PN FT++S L A A   +   G+QLH  + K    ++  VG  LVDMYAKC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQTTLSTVLK 306
           M  A  +F  MPE+NL++WN +I G   N     A  +F  + RE  V  ++ ++S+VL 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + A+   +   +QVH + VK       Y++NSL+D Y KC   ++ VK+F+     D+V 
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
              ++  + Q    EEA   +  M+   I PD    S++L++ A+L+A  QG  +H  II
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G++ +     SL+ MYAKCGS+ DA + F  I D  ++SW+AMI     HG   + ++
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F  ML +G+ P+H+T V VL AC+H G V E   HF SM+K   + P  EHYACM+D+L
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG   EA   +++MP +   SVWGALLGA R Y N+++G+ AAE LF +EP     +V
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           LL+N+   +G  +   +VRR M  N ++KEPG SWI+VK+  + FT  DRSH+ S EIY 
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 480

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
            L+++  L+ K GYV   E   + +EE+E+EQ L++HSEKLA+AFGL+  P  + IR+KK
Sbjct: 481 MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKK 540

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLR C  CHT  +  SKI  REIIVRD+NRFH F +G CSCG YW
Sbjct: 541 NLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 243/466 (52%), Gaps = 24/466 (5%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M  SG  PN+F+ SS+++A A +   L G+++H    K G+D+++F   ALVDMYAK  +
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ-MKSSEINPNMFTYTSALK 205
           +  AV VF  +   ++VSWN++I G   +   D A+ +F+  ++   + PN  + +S L 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           ACA M     GRQ+H  ++K  +     V   L+DMY KC   DE   +F  + +++++ 
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN+++ G +QN    EA + F  M REG+  D+ + STVL S AS  A+     +H   +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K  +  +  I+ SLI  Y KCG + DA ++F+     ++++ T+MI+AY   G   + ++
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 386 LYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS---- 439
           L+  M    I P   +FVC  +L+AC++    E+G     H      + D   G      
Sbjct: 301 LFEHMLSEGIEPSHVTFVC--VLSACSHTGRVEEGL---AHFNSMKKIHDMNPGPEHYAC 355

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDG 495
           +V++  + G +D+A R    +P +   S W A++G   ++G    G+EA +   +M E  
Sbjct: 356 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM-EPY 414

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
              N++ L ++   C  +G + EA      + +  G+  +++   C
Sbjct: 415 NPGNYVLLANM---CTRSGRLEEAN----EVRRLMGVNGVRKEPGC 453



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 219/437 (50%), Gaps = 30/437 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A  +   +  G Q+H ++   GFD++ FV  +LV MYAKC +   + R+FD +PER+
Sbjct: 16  ILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VSWNS+   + H +  + AV  FK+++    + PNE S+SS+++ACA  G    GR++H
Sbjct: 76  LVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVH 135

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K G     +  N+L+DMY K    ++ V +F+ +   D+V+WN ++ G V ++  +
Sbjct: 136 GVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFE 195

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A   F  M+   I P+  ++++ L + A +     G  +H  +IK+    +  +   L+
Sbjct: 196 EACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLI 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYAKCGS+ +A  +F  + + N+I+W  +IS +  +G   +   LF  M  EG+     
Sbjct: 256 TMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHV 315

Query: 300 TLSTVLKS----------VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           T   VL +          +A F ++   K++H ++      +       ++D  G+ G +
Sbjct: 316 TFVCVLSACSHTGRVEEGLAHFNSM---KKIHDMNPGPEHYA------CMVDLLGRAGWL 366

Query: 350 EDAVKIFKESSAVDLV-----ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           ++A K F ES  +        A       Y    +G EA +   EM+    NP ++V   
Sbjct: 367 DEA-KRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME--PYNPGNYVL-- 421

Query: 405 LLNACANLSAYEQGKQV 421
           L N C      E+  +V
Sbjct: 422 LANMCTRSGRLEEANEV 438


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/738 (34%), Positives = 415/738 (56%), Gaps = 10/738 (1%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           +A  G   D+ +LFD + +     WN +   +  C    EA+  +  MV SG++ + F+ 
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
             +I +  G      G+KIH   IKL + SD++  N+L+ +Y K+G   DA  VF+++  
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            DIVSWN++I+G +  E    +L LF++M      P+ F+  SAL AC+ +    +G++L
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 220 HCSLIKMEIKS-DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           HC  ++  I++ D +V   ++DMY+K G +  A  IF  + ++N++AWN++I  + +N  
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309

Query: 279 DMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
             +A   F  M  + G+  D  TL  +L + A  +     + +H  +++  F     +  
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEG----RTIHGYAMRRGFLPHIVLDT 365

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +LID YG+ G ++ A  IF   +  +L++  S+I AY Q G    AL+L+ ++ D  + P
Sbjct: 366 ALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           DS   +S+L A A   +  +G+Q+H +I+K  + S+T   NSLV+MYA CG ++DA + F
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCF 485

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           + +  + +VSW+++I   A HG G+ ++ +F +M+   V PN  T  S+L AC+ +G+V 
Sbjct: 486 NHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E   +FESM++++GI P  EHY  M+D++GR G F  A   +  MPF   A +WG+LL A
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNA 605

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
           +R + ++ V + AAE +F +E + +  +VLL N+YA A  W++V +++  M+   + +  
Sbjct: 606 SRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTS 665

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA----GYVPMVETDLHDVEE 693
             S +E K K +  T GDRSH  + +IY  LD VS ++ +      YV  V     +   
Sbjct: 666 SRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLA 725

Query: 694 SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
             +      HS +LA  FGLI+T  G T+ V+ N RIC  CH   E  SK+  REI+V D
Sbjct: 726 KSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGD 785

Query: 754 VNRFHHFRNGSCSCGGYW 771
              FHHF NG CSCG YW
Sbjct: 786 SKIFHHFSNGRCSCGNYW 803



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 252/464 (54%), Gaps = 7/464 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+ T    L  G ++H +V+   F SD +V NSL+ +Y K G   D+ ++F+ +PER 
Sbjct: 132 VIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERD 191

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+ S Y+  +    ++  FKEM+  G +P+ FS  S + AC+      +G+++H 
Sbjct: 192 IVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHC 251

Query: 121 YSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           ++++   ++ D+    +++DMY+K G +  A  +FK I   +IV+WN +I     +    
Sbjct: 252 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVT 311

Query: 180 WALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
            A   FQ+M     + P++ T  + L ACA +E    GR +H   ++       ++   L
Sbjct: 312 DAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIVLDTAL 367

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY + G +  A +IF  + EKNLI+WN +I+ ++QNG +  A  LF  ++   +  D 
Sbjct: 368 IDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDS 427

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           TT++++L + A   ++   +Q+HA  VK+ + S+  I+NSL+  Y  CG +EDA K F  
Sbjct: 428 TTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNH 487

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+  S+I AYA  G G  ++ L+ EM   +++P+    +SLL AC+     ++G
Sbjct: 488 VLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEG 547

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            +    + + +G          ++++  + G+   A R   E+P
Sbjct: 548 WEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 9/255 (3%)

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   + +D  +   +  +   G +EDA+++F E +  D      MI  +   GL  EAL+
Sbjct: 53  KVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQ 112

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           LY  M    +  DSF    ++ +   +S+ E+GK++H  +IK  F+SD +  NSL+++Y 
Sbjct: 113 LYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYM 172

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           K G   DA++ F E+P+R IVSW++MI G      G  +L +F +ML+ G  P+  + +S
Sbjct: 173 KLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMS 232

Query: 506 VLCACNHAGLVAEAK----HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
            L AC+H       K    H   S  +   +  M      ++D+  + G+   A  +   
Sbjct: 233 ALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTS----ILDMYSKYGEVSYAERIFKC 288

Query: 562 MPFQANASVWGALLG 576
           +  Q N   W  L+G
Sbjct: 289 I-IQRNIVAWNVLIG 302


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/740 (36%), Positives = 419/740 (56%), Gaps = 33/740 (4%)

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           +NSL   Y      +EA+  F  M+ SGI P++++    ++ CA S D   G +IHG  I
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K+ Y  D+F  N+LV  YA+ G L+ A  VF ++   ++VSW ++I G    E    A+ 
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220

Query: 184 LFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           LF +M +  ++ PN  T    + ACA +E  E G +++  +    I+ + ++   LVDMY
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
            KC ++D A+ +F      NL   N + S +++ G   EA  +   M   G+  D+ ++ 
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISML 340

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----- 357
           + + S +  + I   K  H   ++  FES D I N+LID Y KC   + A +IF      
Sbjct: 341 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 400

Query: 358 -------------ESSAVD-------------LVACTSMITAYAQFGLGEEALKLYLEMQ 391
                        E+  VD             +V+  ++I+A  Q  + EEA++++  MQ
Sbjct: 401 TVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQ 460

Query: 392 DRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
            +E +N D     S+ +AC +L A +  K ++ +I K     D   G +LV+M+++CG  
Sbjct: 461 SQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDP 520

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + A   F+ + +R + +W+A IG +A  G  + A+++F +M+E G+ P+ +  +  L AC
Sbjct: 521 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTAC 580

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
            H GLV + K  F SMEK  G+ P   HY CM+D+LGRAG  +EA++L+  MP + N  +
Sbjct: 581 CHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVI 640

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W +LL A R+  NVE+   AAE +  + PE++ ++VLLSN+YASAG W+++AKVR  MK+
Sbjct: 641 WNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 700

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             L+K PG S I+++ K + FT GD SH   ++I A LDE+S   +  G+VP +   L D
Sbjct: 701 KGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMD 760

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V+E EK  +L  HSEKLA+AFGLI++  G TIR+ KNLR+C  CH+  +F SK+ +REII
Sbjct: 761 VDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREII 820

Query: 751 VRDVNRFHHFRNGSCSCGGY 770
           +RD NRFH  R G CSC  +
Sbjct: 821 LRDNNRFHFIRQGKCSCSDF 840



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 244/513 (47%), Gaps = 35/513 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C   +D   G+Q+HG+++   +  D FV NSLV  YA+CG    +R++FD + ER+V
Sbjct: 140 LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNV 199

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSW S+   Y   +F ++AV  F  MV    + PN  ++  +I+ACA   D   G K++ 
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD 259

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +    G + +    +ALVDMY K   ++ A  +F +    ++   NA+ +  V       
Sbjct: 260 FIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE 319

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +   M  S I P+  +  SA+ +C+ +     G+  H  +++   +S   +   L+D
Sbjct: 320 ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 379

Query: 241 MYAKC-------------------------------GSMDEARMIFHLMPEKNLIAWNIV 269
           MY KC                               G +D A   F+ MPEKN+++WN +
Sbjct: 380 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTI 439

Query: 270 ISGHLQNGGDMEAASLFPWMY-REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           IS  +Q     EA  +F +M  +E V  D  T+ ++  +     A+ + K ++    K  
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            + D  +  +L+D + +CG  E A+ IF   +  D+ A T+ I A A  G  E A++L+ 
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFN 559

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAGNSLVNMYAKC 447
           EM ++ + PD  V    L AC +    +QGK++   + K  G   +      +V++  + 
Sbjct: 560 EMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRA 619

Query: 448 GSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
           G +++A +   ++P +   V W++++      G
Sbjct: 620 GLLEEALQLIKDMPTEPNDVIWNSLLAACRVQG 652



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 187/391 (47%), Gaps = 33/391 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC   +DL  G +V+  +  +G + ++ + ++LV MY KC     ++RLFD     +
Sbjct: 241 VISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASN 300

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +   N++ S YV     +EA+     M+ SGIRP+  S+ S I++C+   + L G+  HG
Sbjct: 301 LDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHG 360

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y ++ G++S     NAL+DMY K    + A  +F  + +  +V+WN+++AG +       
Sbjct: 361 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDA 420

Query: 174 -------LHEHN--DW---------------ALKLFQQMKSSE-INPNMFTYTSALKACA 208
                  + E N   W               A+++F  M+S E +N +  T  S   AC 
Sbjct: 421 AWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACG 480

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +L + ++  + K  I+ D  +G  LVDM+++CG  + A  IF+ +  +++ AW  
Sbjct: 481 HLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 540

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV-HALSVKT 327
            I      G    A  LF  M  +G+  D       L +      +   K++ +++    
Sbjct: 541 AIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLH 600

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
               +D     ++D  G+ G +E+A+++ K+
Sbjct: 601 GVSPEDVHYGCMVDLLGRAGLLEEALQLIKD 631


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 285/771 (36%), Positives = 428/771 (55%), Gaps = 19/771 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWNSLFSCY 71
           G QVH +    G   D FV NSLV MY +CG   D+ ++F  IP+  R++VSWN+L +  
Sbjct: 87  GRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAA- 145

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           +  D       F   +V  G   +E +L +++  CA  G S  GR +HG + K G+D+  
Sbjct: 146 LSGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPA 205

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
              NALVDMYAK G L DA   F   E P +VSWN ++     +     A  L + M+  
Sbjct: 206 RVGNALVDMYAKCGELADAERAFP--EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIK 263

Query: 192 E---INPNMFTYTSALKACAG-MELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKC 245
           E   +  +  T  S L AC+G  EL  L R+LH   ++  ++  SD +    LV  Y +C
Sbjct: 264 EHGSVPADEITVLSVLPACSGPTELSRL-RELHAFTVRRGLDAASDKVPNA-LVAAYGRC 321

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQTTLSTV 304
           G +  A  +F  +  K + +WN +IS H Q      A  LF  M    G+  D  ++ ++
Sbjct: 322 GRLLHADRVFTDIRRKTVSSWNTLISAHAQQN-TAAAIELFIQMTNACGLKPDGFSIGSL 380

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI-FKESSAVD 363
           L + A  + +   K  H   ++   E D  I  SL+ AY +C   E   ++ F       
Sbjct: 381 LMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKG 440

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV-CSSLLNACANLSAYEQGKQVH 422
            V   +MI+ Y+Q GL  E+L+L+ EMQ  E +  S +  +S L AC+ LS+   GK++H
Sbjct: 441 EVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMH 500

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRG 481
              +K     D F  +SL++MY+KCG ++DA   F  +  R   VSW+AMI G A +G G
Sbjct: 501 CFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLG 560

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF-GIQPMQEHYA 540
           +EA++++G+M  +G+ P+  T + +L AC HAG++ E    F+ M      I+   EHY+
Sbjct: 561 REAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYS 620

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C+I +L RAG+F +A+ L+  MP + +A +  ++L A  I+   E+G   AE L  +EP+
Sbjct: 621 CVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPD 680

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           K+  +VL SN+YA +  WD++ KVR+ ++D  + KEPG SWI+V  KVY+F  G+  H  
Sbjct: 681 KAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPE 740

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +++      + + + + GYVP     LH++EE EK + L+ HSEK AV FGL+ T   A
Sbjct: 741 MEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPA 800

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+RV KN+R+C DCH +   ISK+  R+I+VRD  RFHHFR G CSCG YW
Sbjct: 801 TVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 270/549 (49%), Gaps = 49/549 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C +      G  VHG+   +G+D+   V N+LV MYAKCG   D+ R F   P  S
Sbjct: 176 VLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--S 233

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVL---SGIRPNEFSLSSMINACAGSGDSLLGRK 117
           VVSWN +   Y        A    ++M +     +  +E ++ S++ AC+G  +    R+
Sbjct: 234 VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRE 293

Query: 118 IHGYSIKLGYD--SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +H ++++ G D  SD    NALV  Y + G L  A  VF DI    + SWN +I+     
Sbjct: 294 LHAFTVRRGLDAASDKVP-NALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHA-Q 351

Query: 176 EHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           ++   A++LF QM ++  + P+ F+  S L ACA  +     +  H  +++  ++ D ++
Sbjct: 352 QNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVI 411

Query: 235 GVGLVDMYAKCGSMDE-ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-E 292
              L+  Y +C   +  AR++F  M EK  + W  +ISG+ QNG   E+  LF  M   E
Sbjct: 412 RASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVE 471

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G      + ++ L + +   ++ + K++H  ++K     D ++ +SLID Y KCG VEDA
Sbjct: 472 GHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDA 531

Query: 353 VKIFKESSAVDL-VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
              F    A D  V+ T+MIT YA  GLG EA++LY +M+   + PD F    LL AC +
Sbjct: 532 RTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGH 591

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
               E+G       ++F         + + N + K               +  +  +S +
Sbjct: 592 AGMLEEG-------LRF--------FDEMRNHHHKI--------------EVKLEHYSCV 622

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           IG L++ GR  +A+ +  +M ++   P+   L SVL AC+  G   EA+   +  E+   
Sbjct: 623 IGMLSRAGRFADAVALMAEMPQE---PDAKILSSVLSACHIHG---EAELGSDVAERLLE 676

Query: 532 IQPMQ-EHY 539
           ++P + EHY
Sbjct: 677 LEPDKAEHY 685



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 283/592 (47%), Gaps = 46/592 (7%)

Query: 91  GIRPNEFSLSSMINACA--GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           GI P+ F+L     +C     G +  GR++H  + KLG   D F  N+LV MY + G +E
Sbjct: 61  GIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVE 120

Query: 149 DAVAVFKDIEHPD----IVSWNAVIAGCVLHEHNDWALKLFQQ-MKSSEINPNMFTYTSA 203
           DA  VF  I  PD    IVSWNA++A   L       L+LF+  + +     +  T  + 
Sbjct: 121 DAEKVFGGI--PDAARNIVSWNALMA--ALSGDPRRGLELFRDCLVAVGGMVDEATLVTV 176

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L  CA +   E GR +H    K    +   VG  LVDMYAKCG + +A   F   P  ++
Sbjct: 177 LPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SV 234

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMY------REGVGFDQTTLSTVLKSVASFQAIGVC 317
           ++WN+++  + +N    EA + F  +          V  D+ T+ +VL + +    +   
Sbjct: 235 VSWNVMLGAYTRN---REAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRL 291

Query: 318 KQVHALSVKTAFE-SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
           +++HA +V+   + + D + N+L+ AYG+CG +  A ++F +     + +  ++I+A+AQ
Sbjct: 292 RELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ 351

Query: 377 FGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
                 A++L+++M +   + PD F   SLL ACA+       K  H  I++ G   DT 
Sbjct: 352 QNTA-AAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTV 410

Query: 436 AGNSLVNMYAKCGSIDDADRA-FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE- 493
              SL++ Y +C   +   R  F  + ++G V W AMI G +Q+G   E+LQ+F +M   
Sbjct: 411 IRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSV 470

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           +G   + I+  S L AC+    V   K  H  +++      P     + +ID+  + G  
Sbjct: 471 EGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLS--SSLIDMYSKCGFV 528

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF-----AIEPEKSSTHVL 607
           ++A    D +  +     W A++     Y    +G+ A E+        +EP++  T++ 
Sbjct: 529 EDARTFFDRLKARDAKVSWTAMITG---YAVNGLGREAVELYGKMRREGMEPDE-FTYLG 584

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           L      AGM +   +    M+++  K       IEVK + Y+  +G  S A
Sbjct: 585 LLMACGHAGMLEEGLRFFDEMRNHHHK-------IEVKLEHYSCVIGMLSRA 629


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/764 (35%), Positives = 423/764 (55%), Gaps = 59/764 (7%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           +F GL    +V+   + S+  ++ NSL+  Y++ G    +R +FD + +++++SWNS+ +
Sbjct: 78  MFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVA 137

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            Y      +EA   F +M                                        + 
Sbjct: 138 GYFQNKRPQEAQNMFDKMS---------------------------------------ER 158

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           +  S N LV  Y   G + +A  VF  +   ++VSW A++ G V       A  LF QM 
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                 N+ ++T  L    G  L+E      C L  M  + D +    ++  Y + G + 
Sbjct: 219 EK----NVVSWTVML----GGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           EARM+F  MP +N+++W  +I+G++QN     A  LF  M  +    ++ + + +LK   
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYT 326

Query: 310 SFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +   +    ++ +A+ +K+         N++I  +G+ G V  A ++F +    D    +
Sbjct: 327 NCGRLDEASELFNAMPIKSVV-----ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWS 381

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +MI  Y + GL  +AL+L+  MQ   I P+     S+L+ CA L+  + G+++H  +++ 
Sbjct: 382 AMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS 441

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            F  D +  + L++MY KCG++  A + F     + +V W+++I G AQHG G EAL++F
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             M   G++P+ +T V VL AC++ G V +    F SME K+ ++   EHYACM+D+LGR
Sbjct: 502 HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGR 561

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  EAM+L++ MP +A+A +WGALLGA R +  +++ + AA+ L  +EP+ +   +LL
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILL 621

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS-HARSKEIYAK 667
           SNIYAS G WD+VA++RR M+D ++ K PG SWI V+ KV+ FT GD S H    EI   
Sbjct: 622 SNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRI 681

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L+ +S LL +AGY P     LHDV+E EK Q L +HSEKLAVA+GL+  P G  IRV KN
Sbjct: 682 LEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKN 741

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR+C DCH + + I+K+  REII+RD NRFHHF++GSCSC  YW
Sbjct: 742 LRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C    +L  G ++H  +V + FD D +VA+ L+ MY KCGN   ++++FD    + 
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VV WNS+ + Y       EA+  F +M  SGI P++ +   +++AC+ +G+   G +I +
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               K   +  +     +VD+  + G L +A+ + + +    D + W A++  C  H   
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKL 597

Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAGM--ELKELGRQLH---------CSLIKM 226
           D A    +++   E  N   F   S + A  G   ++ EL R +          CS I +
Sbjct: 598 DLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVV 657

Query: 227 EIKSDPIVG 235
           E K     G
Sbjct: 658 EKKVHKFTG 666


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/684 (35%), Positives = 401/684 (58%), Gaps = 10/684 (1%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSI--KLGYDSDMFSANALVDMYAKVGNLEDAV 151
           P E ++  ++   A + +   G+ IH + I        ++   N+L+++YAK   +  A 
Sbjct: 24  PLEHTIQ-LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVAR 82

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL---KLFQQMKSSE-INPNMFTYTSALKAC 207
            +F  +   ++VSW A++AG   + HN   L   +LF+ M S + + PN + + + + +C
Sbjct: 83  ILFDGMRKRNVVSWGALMAG---YFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSC 139

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +       G Q H   +K  +     V   L+ MY++   +  A  +++ +P  ++ ++N
Sbjct: 140 SDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYN 199

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           I+I+G L+NG   EA  +   M  E + +D  T  T     +  + + +  QVH    +T
Sbjct: 200 IIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRT 259

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             E D ++ +++ID YGKCG++ +A K+F      ++V+ T+++ AY+Q G  EEAL  +
Sbjct: 260 GAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFF 319

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            EM+   + P+ +  + LLN+CA +SA   GK +H  I K GF      GN+L+NMY+K 
Sbjct: 320 PEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKS 379

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           GSI+ A + F E+  R  ++WSAMI GL+ HG G+EAL +F +ML     P+++T V VL
Sbjct: 380 GSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVL 439

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC H G V E  ++   + K+ GI+P  EHY C++ +L +AG+  EA   + + P + +
Sbjct: 440 SACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWD 499

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
              W  LL A  +++N  +G+  AE++  ++P    T++LLSN+YA A  WD V K+R+ 
Sbjct: 500 VVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKL 559

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           M++  +KKEPG SWIE+++ ++ F    ++H  S +IY K+ E+  ++   GYVP +   
Sbjct: 560 MRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAV 619

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
            HDVE+ +K + + +HSEKLA+A+GL+ TP GA IRV KNLR+CVDCH++ + ISK+ +R
Sbjct: 620 FHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNR 679

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
            IIVRD NRFH F +G CSC  YW
Sbjct: 680 MIIVRDANRFHCFGDGGCSCADYW 703



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 268/499 (53%), Gaps = 8/499 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA--NSLVVMYAKCGNFIDSRRLFDAIPE 58
           +LK     K+L  G  +H  ++ T   + + +   NSL+ +YAKC   + +R LFD + +
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           R+VVSW +L + Y H   + E +  FK M+ +  +RPNE+  +++I++C+ SG  + G +
Sbjct: 91  RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            HGY++K G     +  NAL+ MY++  +++ A++V+ ++   D+ S+N +I G + + +
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL++  +M    I  +  TY +A   C+ ++   LG Q+HC + +   + D  V   
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           ++DMY KCG++  AR +F+ +  KN+++W  +++ + QNG   EA + FP M  +G+  +
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPN 330

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + T + +L S A   A+G  K +H    K+ FE    + N+LI+ Y K G +E A K+F 
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFL 390

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    D +  ++MI   +  GLG EAL ++ EM   +  P       +L+ACA+L + ++
Sbjct: 391 EMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQE 450

Query: 418 GKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGL 475
           G      ++K  G          +V +  K G +D+A+      P +  +V+W  ++   
Sbjct: 451 GFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSAC 510

Query: 476 AQH---GRGKEALQMFGQM 491
             H   G GK+  ++  QM
Sbjct: 511 HVHQNYGLGKKVAELVLQM 529


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 374/624 (59%), Gaps = 9/624 (1%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           ++  D+ SWN+VIA       +  AL  F  M+   + P   ++  A+KAC+ +     G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +Q H        +SD  V   L+ MY+ CG +++AR +F  +P++N+++W  +I G+  N
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 277 GGDMEAASLFPWMY------REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G  ++A SLF  +        + +  D   L +V+ + +   A G+ + +H+  +K  F+
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 331 SDDYIVNSLIDAYGKCGH--VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
               + N+L+DAY K G   V  A KIF +    D V+  S+++ YAQ G+  EA +++ 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 389 EM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            + +++ +  ++   S++L A ++  A   GK +H  +I+ G   D   G S+++MY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G ++ A +AF  + ++ + SW+AMI G   HG   +AL++F  M++ GV PN+IT VSVL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+HAGL  E    F +M+ +FG++P  EHY CM+D+LGRAG  Q+A +L+  M  + +
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           + +W +LL A RI+KNVE+ + +   LF ++      ++LLS+IYA AG W +V +VR  
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MK+  L K PG S +E+  +V+ F +GD  H + ++IY  L E++  L +AGYV    + 
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
            HDV+E EKE  L  HSEKLA+AFG++ T PG+T+ V KNLR+C DCH   + ISKIV R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           E +VRD  RFHHF++G CSCG YW
Sbjct: 636 EFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 231/478 (48%), Gaps = 51/478 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +KAC+S  D+F G Q H      G+ SD FV+++L+VMY+ CG   D+R++FD IP+R++
Sbjct: 83  IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGDSLLG 115
           VSW S+   Y       +AV  FK++++        +  +   L S+I+AC+      L 
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA--VFKDIEHPDIVSWNAVIAGCV 173
             IH + IK G+D  +   N L+D YAK G    AVA  +F  I   D VS+N++++   
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
               ++ A ++F+++ K+  +  N  T ++ L A +      +G+ +H  +I+M ++ D 
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           IVG  ++DMY KCG ++ AR  F  M  KN+ +W  +I+G+  +G   +A  LFP M   
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382

Query: 293 GVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           GV  +  T  +VL   S A     G  +  +A+  +   E        ++D  G+ G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEG-WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A                                  Y  +Q  ++ PDS + SSLL AC 
Sbjct: 442 KA----------------------------------YDLIQRMKMKPDSIIWSSLLAAC- 466

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGIV 466
               ++  +   + + +   +  +  G  ++  ++YA  G   D +R    + +RG+V
Sbjct: 467 --RIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 210/436 (48%), Gaps = 15/436 (3%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           + +  V SWNS+ +         EA+  F  M    + P   S    I AC+   D   G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++ H  +   GY SD+F ++AL+ MY+  G LEDA  VF +I   +IVSW ++I G  L+
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 176 EHNDWALKLFQQMKSSEINPN--MFT----YTSALKACAGMELKELGRQLHCSLIKMEIK 229
            +   A+ LF+ +   E + +  MF       S + AC+ +  K L   +H  +IK    
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 230 SDPIVGVGLVDMYAKC--GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
               VG  L+D YAK   G +  AR IF  + +K+ +++N ++S + Q+G   EA  +F 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 288 WMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            + +   V F+  TLSTVL +V+   A+ + K +H   ++   E D  +  S+ID Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G VE A K F      ++ + T+MI  Y   G   +AL+L+  M D  + P+     S+L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 407 NACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PD 462
            AC++   + +G +  +    +FG          +V++  + G +  A      +   PD
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 463 RGIVSWSAMIGGLAQH 478
             I  WS+++     H
Sbjct: 456 SII--WSSLLAACRIH 469



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 3/211 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN--FIDSRRLFDAIPE 58
           V+ AC+      L   +H  V+  GFD    V N+L+  YAK G      +R++FD I +
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRK 117
           +  VS+NS+ S Y       EA   F+ +V + +   N  +LS+++ A + SG   +G+ 
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH   I++G + D+    +++DMY K G +E A   F  +++ ++ SW A+IAG  +H H
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACA 208
              AL+LF  M  S + PN  T+ S L AC+
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACS 399


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/733 (34%), Positives = 414/733 (56%), Gaps = 1/733 (0%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           Y + G   ++  LF+ + +     WN +   +V      +AV F+  M   G+R + F+ 
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
             +I AC G  D   G ++HG  IK G D D++  N+L+ MYAK+G +E A  VF+++  
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VSWN++I+G V       +L  F++M++S I  + F+    L AC+       G+++
Sbjct: 190 RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEI 249

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           HC +++  ++ D +V   LVDMYAKCG MD A  +F  + +K+++AWN +I G+  N   
Sbjct: 250 HCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQS 309

Query: 280 MEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
            E+ +    M   G +  D  T+  +L   A  +AI + K VH  +++  F     +  +
Sbjct: 310 FESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETA 369

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D YG+CG ++ A  +F + +  +L++  +MI +Y + G   +A+ L+ ++ ++ + PD
Sbjct: 370 LVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPD 429

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           +   +S+L A A L++  + +Q+H ++ K    S+TF  NS+V MY KCG++  A   F 
Sbjct: 430 ATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFD 489

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            +  + ++SW+ +I   A HG G+ ++++F +M E G  PN  T VS+L +C+ AGLV E
Sbjct: 490 RMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNE 549

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
              +F SM++ + I P  EHY C++D++GR G    A   ++ MP    A +WG+LL A+
Sbjct: 550 GWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTAS 609

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           R   +VE+ + AAE + ++E + +  +VLLSN+YA AG W++V +++  MK   L+K  G
Sbjct: 610 RNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVG 669

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            S +++  K + F   DRS      +Y  LD +S  + +  YV  +        E ++  
Sbjct: 670 CSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDLEKKRAN 729

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
               HS +LA+ FGLI+T  G  + V+KN+RIC  CH   + IS+   REIIVRD   FH
Sbjct: 730 SAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVRDSKIFH 789

Query: 759 HFRNGSCSCGGYW 771
           HF  G CSCG YW
Sbjct: 790 HFNGGHCSCGDYW 802



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 264/495 (53%), Gaps = 17/495 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    DL  G +VHG V+ +G D D ++ NSL++MYAK G    +  +F  +P R 
Sbjct: 132 VIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRD 191

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+ S YV       ++  F+EM  SGI+ + FS+  ++ AC+  G    G++IH 
Sbjct: 192 LVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHC 251

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++   + D+    +LVDMYAK G ++ A  +F  I    IV+WNA+I G  L+  +  
Sbjct: 252 QMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFE 311

Query: 181 ALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           +    ++M+   +++P+  T  + L  CA +E   LG+ +H   I+       ++   LV
Sbjct: 312 SFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALV 371

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY +CG +  A  +F  M E+NLI+WN +I+ + +NG + +A +LF  +  + +  D T
Sbjct: 372 DMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDAT 431

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++++L + A   ++   +Q+H    K   +S+ ++ NS++  YGKCG++  A +IF   
Sbjct: 432 TIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRM 491

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D+++  ++I AYA  G G  +++L+ EM+++   P+     SLL +C+      +G 
Sbjct: 492 TFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGW 551

Query: 420 QVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +       F  M   +  N        ++++  + G++D A     E+P   +   + + 
Sbjct: 552 EY------FNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMP---LAPTARIW 602

Query: 473 GGLAQHGRGKEALQM 487
           G L    R K  +++
Sbjct: 603 GSLLTASRNKGDVEL 617



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 5/288 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C   + + LG  VHG  +  GF     +  +LV MY +CG    +  LF  + ER+
Sbjct: 335 LLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERN 394

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++ + Y       +A+  F+++    ++P+  +++S++ A A         +IHG
Sbjct: 395 LISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHG 454

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  KL  DS+ F +N++V MY K GNL  A  +F  +   D++SWN VI    +H     
Sbjct: 455 YVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRI 514

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG-L 238
           +++LF +M+     PN  T+ S L +C+   L   G +   S+ K +   +P I   G +
Sbjct: 515 SIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSM-KRDYNINPGIEHYGCI 573

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASL 285
           +D+  + G++D A+     MP       W  +++   +N GD+E A +
Sbjct: 574 LDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTAS-RNKGDVELAEI 620



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 4/249 (1%)

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           E +   +   + +Y + G++++A+ +F+     D      MI  +   GL  +A+  Y  
Sbjct: 57  ERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHR 116

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M+   +  D+F    ++ AC  L    +G++VH  +IK G   D + GNSL+ MYAK G 
Sbjct: 117 MEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGC 176

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+ A+  F E+P R +VSW++MI G    G G  +L  F +M   G+  +  +++ +L A
Sbjct: 177 IESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGA 236

Query: 510 CNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           C+  G +   K  H + M  +  +  M +    ++D+  + G+   A  L D +  ++  
Sbjct: 237 CSLEGFLRNGKEIHCQMMRSRLELDVMVQ--TSLVDMYAKCGRMDYAERLFDQITDKSIV 294

Query: 569 SVWGALLGA 577
           + W A++G 
Sbjct: 295 A-WNAMIGG 302


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/703 (37%), Positives = 414/703 (58%), Gaps = 20/703 (2%)

Query: 88  VLSGIRP-NEFSLSSMINAC----AGSGDSLLGRKIHGYSIKLG--YDSDMFSANALVDM 140
           +L+G  P   F+L S++ A     A +    LGR+ H +++K G  +    F+ NAL+ M
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 141 YAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
           YA++G + DA  +F        D+V+WN +++  V     D A++    M +  + P+  
Sbjct: 61  YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           T+ SAL AC+ +EL ++GR++H  +IK  E+ ++  V   LVDMYA    + +AR +F +
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180

Query: 258 MPE--KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD--QTTLSTVLKSVASFQA 313
           +P+  K L  WN +I G+ Q G D EA  LF  M  E  GF   +TT+++VL + A  +A
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA-GFVPCETTMASVLPACARSEA 239

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
               + VH   VK     + ++ N+L+D Y + G  + A +IF      D+V+  ++IT 
Sbjct: 240 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 299

Query: 374 YAQFGLGEEALKLYLEMQDRE---INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
               G   +A +L  EMQ  E   + P++    +LL  CA L+A  +GK++H + ++   
Sbjct: 300 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 359

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            +D   G++LV+MYAKCG +  +   F  +P R  ++W+ +I     HG G EA  +F +
Sbjct: 360 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 419

Query: 491 MLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           M   G   PN +T ++ L AC+H+G+V      F +ME+  G++P  +  AC++DILGRA
Sbjct: 420 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 479

Query: 550 GKFQEAMELVDTMPF-QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           G+  EA  +V +M   +   S W  +LGA R+++NV +G+ A E L  +EPE++S +VLL
Sbjct: 480 GRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 539

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
            NIY++AG W   A+VR  M+   + KEPG SWIEV   ++ F  G+ +H  S+E++A +
Sbjct: 540 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHM 599

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
           + +   +   GY P     LHD+++ +K  +L  HSEKLA+AFGL+   PGATIRV KNL
Sbjct: 600 EALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNL 659

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+C DCH + +F+SK+V REI++RDV RFHHFRNG CSCG YW
Sbjct: 660 RVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 236/485 (48%), Gaps = 23/485 (4%)

Query: 13  LGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLF-DAIPERS-VVSWNSLF 68
           LG + H   +  G       F  N+L+ MYA+ G   D++RLF  A P R  VV+WN++ 
Sbjct: 32  LGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 91

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK---L 125
           S  V     +EAV    +MV  G+RP+  + +S + AC+      +GR++H Y IK   L
Sbjct: 92  SVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 151

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD----IVSWNAVIAGCVLHEHNDWA 181
             +S  F A+ALVDMYA    +  A  VF  +  PD    +  WNA+I G      ++ A
Sbjct: 152 AANS--FVASALVDMYATHEQVGKARQVFDMV--PDSGKQLGMWNAMICGYAQAGMDEEA 207

Query: 182 LKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           L+LF +M++ +   P   T  S L ACA  E       +H  ++K  +  +  V   L+D
Sbjct: 208 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 267

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR---EGVGFD 297
           MYA+ G  D AR IF ++   ++++WN +I+G +  G   +A  L   M +    GV  +
Sbjct: 268 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 327

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             TL T+L   A   A    K++H  +V+ A ++D  + ++L+D Y KCG +  +  +F 
Sbjct: 328 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 387

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYE 416
                + +    +I AY   GLG EA  L+  M    E  P+     + L AC++    +
Sbjct: 388 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 447

Query: 417 QGKQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS--EIPDRGIVSWSAMIG 473
           +G Q+ H      G          +V++  + G +D+A    +  E  ++ + +WS M+G
Sbjct: 448 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 507

Query: 474 GLAQH 478
               H
Sbjct: 508 ACRLH 512



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 147/278 (52%), Gaps = 9/278 (3%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC ++ + F G + VHG VV  G   + FV N+L+ MYA+ G    +RR+F  +   
Sbjct: 230 VLPAC-ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 288

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL---SGIRPNEFSLSSMINACAGSGDSLLGR 116
            VVSWN+L +  V    + +A    +EM      G+ PN  +L +++  CA       G+
Sbjct: 289 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 348

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IHGY+++   D+D+   +ALVDMYAK G L  + AVF  +   + ++WN +I    +H 
Sbjct: 349 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 408

Query: 177 HNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKELGRQL-HCSLIKMEIKSDPIV 234
               A  LF +M +S E  PN  T+ +AL AC+   + + G QL H       ++  P +
Sbjct: 409 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 468

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVI 270
              +VD+  + G +DEA  +   M   E+ + AW+ ++
Sbjct: 469 LACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 4/181 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C        G ++HG  V    D+D  V ++LV MYAKCG    SR +FD +P R+
Sbjct: 334 LLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRN 393

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI- 118
            ++WN L   Y       EA   F  M  SG  RPNE +  + + AC+ SG    G ++ 
Sbjct: 394 TITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLF 453

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLHE 176
           H      G +        +VD+  + G L++A A+   +E     + +W+ ++  C LH 
Sbjct: 454 HAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHR 513

Query: 177 H 177
           +
Sbjct: 514 N 514


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/764 (35%), Positives = 423/764 (55%), Gaps = 59/764 (7%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVA-NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           +F GL    +V+   + S+  ++ NSL+  Y++ G    +R +FD + +++++SWNS+ +
Sbjct: 78  MFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVA 137

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            Y      +EA   F +M                                        + 
Sbjct: 138 GYFQNKRPQEAQNMFDKMS---------------------------------------ER 158

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           +  S N LV  Y   G + +A  VF  +   ++VSW A++ G V       A  LF QM 
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                 N+ ++T  L    G  L+E      C L  M  + D +    ++  Y + G + 
Sbjct: 219 EK----NVVSWTVML----GGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           EARM+F  MP +N+++W  +I+G++QN     A  LF  M  +    ++ + + +LK   
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYT 326

Query: 310 SFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +   +    ++ +A+ +K+         N++I  +G+ G V  A ++F +    D    +
Sbjct: 327 NCGRLDEASELFNAMPIKSVV-----ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWS 381

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +MI  Y + GL  +AL+L+  MQ   I P+     S+L+ CA L+  + G+++H  +++ 
Sbjct: 382 AMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS 441

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
            F  D +  + L++MY KCG++  A + F     + +V W+++I G AQHG G EAL++F
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             M   G++P+ +T V VL AC++ G V +    F SME K+ ++   EHYACM+D+LGR
Sbjct: 502 HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGR 561

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AGK  EAM+L++ MP +A+A +WGALLGA R +  +++ + AA+ L  +EP+ +   +LL
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILL 621

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS-HARSKEIYAK 667
           SNIYAS G WD+VA++RR M+D ++ K PG SWI V+ KV+ FT GD S H    EI   
Sbjct: 622 SNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRI 681

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L+ +S LL +AGY P     LHDV+E EK Q L +HSEKLAVA+GL+  P G  IRV KN
Sbjct: 682 LEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKN 741

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR+C DCH + + I+K+  REII+RD NRFHHF++GSCSC  YW
Sbjct: 742 LRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C    +L  G ++H  +V + FD D +VA+ L+ MY KCGN   ++++FD    + 
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VV WNS+ + Y       EA+  F +M  SGI P++ +   +++AC+ +G+   G +I +
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               K   +  +     +VD+  + G L +A+ + + +    D + W A++  C  H   
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKL 597

Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAGM--ELKELGRQLH---------CSLIKM 226
           D A    +++   E  N   F   S + A  G   ++ EL R +          CS I +
Sbjct: 598 DLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVV 657

Query: 227 EIKSDPIVG 235
           E K     G
Sbjct: 658 EKKVHKFTG 666


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/723 (34%), Positives = 395/723 (54%), Gaps = 70/723 (9%)

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K G  +D + +  L+  Y+      DA  + + I  P + S++++I      +  
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             ++ +F +M S  + P+     +  K CA +   + G+Q+HC      +  D  V   L
Sbjct: 98  SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157

Query: 239 VDMYAKCGSMDEARMIFHLMPEK-----------------------------------NL 263
             MY +CG M +AR +F  M EK                                   N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN ++SG  ++G   EA  +F  M+  G   DQ T+S+VL SV   + + + +Q+H  
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE------------------------- 358
            +K     D  ++++++D YGK GHV   +K+F E                         
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337

Query: 359 ----------SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
                        +++V+ TS+I   AQ G   EAL+L+ EMQ   + P+     S+L A
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPA 397

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C N++A   G+  H   ++   + D   G++L++MYAKCG I  +   F+ +P + +V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCW 457

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           ++++ G + HG+ KE + +F  ++   + P+ I+  S+L AC   GL  E   +F  M +
Sbjct: 458 NSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSE 517

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
           ++GI+P  EHY+CM+++LGRAGK QEA +L+  +PF+ ++ VWGALL + R+  NV++ +
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
            AA+ LF +EPE   T+VL+SNIYA+ GMW  V  +R  M+   LKK PG SWI+VK+KV
Sbjct: 578 IAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKV 637

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           YT    D+SH +  +I  K+DE+S+ + K+G+ P ++  L DVEE E+EQ+L+ HSEKLA
Sbjct: 638 YTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLA 697

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           V FGL+ TP G  ++V KNLRIC DCH   +FIS    REI +RD NRFHHF++G CSCG
Sbjct: 698 VVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCG 757

Query: 769 GYW 771
            +W
Sbjct: 758 DFW 760



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 232/529 (43%), Gaps = 72/529 (13%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q H  ++ +G  +D +++  L+  Y+    F D+  +  +IP+ +V S++SL        
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
              +++  F  M   G+ P+   L ++   CA       G++IH  +   G D D F   
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 136 ALVDMYAKVGNLEDAVAVF-----KDIE------------------------------HP 160
           +L  MY + G + DA  VF     KD+                                P
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           +IVSWN +++G     ++  A+ +FQ+M      P+  T +S L +    E   +GRQ+H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGS-------------------------------MD 249
             +IK  +  D  V   ++DMY K G                                +D
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335

Query: 250 EARMIFHLMPEK----NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           +A  +F L  E+    N+++W  +I+G  QNG D+EA  LF  M   GV  ++ T+ ++L
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSML 395

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            +  +  A+G  +  H  +V+     D ++ ++LID Y KCG ++ +  +F      +LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLV 455

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVH 424
              S++  Y+  G  +E + ++  +    + PD    +SLL+AC  +   ++G K  ++ 
Sbjct: 456 CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
             ++G        + +VN+  + G + +A     EIP +     W A++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALL 564



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 198/432 (45%), Gaps = 77/432 (17%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + K C        G Q+H +   +G D D FV  SL  MY +CG   D+R++FD + E+ 
Sbjct: 122 LFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKD 181

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN------------------------- 95
           VV+ ++L   Y     LEE V    EM  SGI PN                         
Sbjct: 182 VVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQ 241

Query: 96  ----------EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
                     + ++SS++ +   S +  +GR+IHGY IK G   D    +A++DMY K G
Sbjct: 242 KMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSG 301

Query: 146 NLEDAVAVFKDIE-----------------------------------HPDIVSWNAVIA 170
           ++   + +F + E                                     ++VSW ++IA
Sbjct: 302 HVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIA 361

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           GC  +  +  AL+LF++M+ + + PN  T  S L AC  +     GR  H   +++ +  
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           D  VG  L+DMYAKCG +  ++++F++MP KNL+ WN +++G+  +G   E  S+F  + 
Sbjct: 422 DVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLM 481

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVC----KQVHALSVKTAFESDDYIVNSLIDAYGKC 346
           R  +  D  + +++L +      +G+     K  + +S +   +      + +++  G+ 
Sbjct: 482 RTRLKPDFISFTSLLSACGQ---VGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRA 538

Query: 347 GHVEDAVKIFKE 358
           G +++A  + KE
Sbjct: 539 GKLQEAYDLIKE 550



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 150/319 (47%), Gaps = 40/319 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           VL +    ++L +G Q+HG V+  G   D+ V ++++ MY K G+     +LFD      
Sbjct: 258 VLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMME 317

Query: 58  --------------------------------ERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
                                           E +VVSW S+ +         EA+  F+
Sbjct: 318 TGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFR 377

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           EM ++G++PN  ++ SM+ AC        GR  HG+++++    D+   +AL+DMYAK G
Sbjct: 378 EMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCG 437

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            ++ +  VF  +   ++V WN+++ G  +H      + +F+ +  + + P+  ++TS L 
Sbjct: 438 RIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKN 262
           AC  + L + G + + +++  E    P +     +V++  + G + EA  +   +P E +
Sbjct: 498 ACGQVGLTDEGWK-YFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPD 556

Query: 263 LIAWNIVI-SGHLQNGGDM 280
              W  ++ S  LQN  D+
Sbjct: 557 SCVWGALLNSCRLQNNVDL 575



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 1/218 (0%)

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q HA  +K+  ++D YI   LI +Y       DA  I +      + + +S+I A  +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           L  +++ ++  M    + PD+ V  +L   CA LSA++ GKQ+H      G   D F   
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           SL +MY +CG + DA + F  + ++ +V+ SA++ G A+ G  +E +++  +M + G+ P
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           N ++   +L   N +G   EA   F+ M    G  P Q
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMH-HLGFCPDQ 252



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 3/213 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G   HG  V      D  V ++L+ MYAKCG    S+ +F+ +P ++
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN 453

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           +V WNSL + Y      +E +  F+ ++ + ++P+  S +S+++AC   G +  G K  +
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFN 513

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S + G    +   + +V++  + G L++A  + K+I   PD   W A++  C L  + 
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNV 573

Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAGM 210
           D A    Q++   E  NP  +   S + A  GM
Sbjct: 574 DLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGM 606


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/796 (33%), Positives = 429/796 (53%), Gaps = 79/796 (9%)

Query: 20  IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEE 79
           +V+   FD D  + NSL+ +YAK G    +  LF  +PE+ V+SW+++ +CY + +   E
Sbjct: 196 MVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANE 255

Query: 80  AVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
           A+  F EM+     PN  ++ S + ACA S +   G+KIH                    
Sbjct: 256 ALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH-------------------- 295

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
                      +AV+KD+     VSW A+++G   +     ++ +F+ M S  I P+   
Sbjct: 296 ----------KIAVWKDV-----VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVA 340

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
               L A + + + +    LH  +++    S+  VG  L+++Y+KCGS+ +A  +F  M 
Sbjct: 341 VVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI 400

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK- 318
            ++++ W+ +I+ +  +G   EA  +F  M +   G       ++   V    AI  C  
Sbjct: 401 VRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTL 460

Query: 319 ------QVHALSVKTAF------------------------------ESDDYIVNSLIDA 342
                 +V A  ++  F                              + D  I+      
Sbjct: 461 ATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIM 520

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS--- 399
           Y     ++ A  +F++           MI  +A  G    +L+LY +M ++ + PD+   
Sbjct: 521 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGV 580

Query: 400 ----FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
                   S+L AC NL A  +G+  H ++I+ GF  D     ++++MY+KCGS+D A  
Sbjct: 581 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 640

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F E   + +V WSAMI     HG G++A+ +F QM++ GV P+H+T   VL AC+H+GL
Sbjct: 641 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 700

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           + E K +F+ M ++F I     +YACM+D+LGRAG+  EA++L++ MP + +AS+WG+LL
Sbjct: 701 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
           GA RI+ N+++ +  A+ LF ++P  +  HVLLSNIYA+   W+ V KVR+ M      K
Sbjct: 761 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 820

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
             G S +E  ++V+ F VGDRSH + +++YAKL+E++  +   GYVP+ +  LHD+EE  
Sbjct: 821 IQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEA 880

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           KE  L +HSE+LA+AFGLI T PG T+R+ KNLRIC DCH + + ISKIV+R I+VRD++
Sbjct: 881 KEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMH 940

Query: 756 RFHHFRNGSCSCGGYW 771
           RFH F +G CSCG YW
Sbjct: 941 RFHRFEDGVCSCGDYW 956



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 269/597 (45%), Gaps = 91/597 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC + + +    Q+H  V  TG   D F A  L  +YAKC +   +R++FD  P  +
Sbjct: 10  LFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V  WNS    Y      EE +  F  M+ + G  P+ F++   + ACAG     LG+ IH
Sbjct: 67  VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126

Query: 120 GYSIK---LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           G++ K   +G  SDMF  +ALV++Y+K G + +A+ VF++ + PD V W +++ G   + 
Sbjct: 127 GFAKKNDEIG--SDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 177 HNDWALKLFQQM-----------------------KSSEINPNMFTYT--------SALK 205
             + AL LF QM                          +I  N+F+          S + 
Sbjct: 185 DPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI 244

Query: 206 AC-AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
           AC A  E       L   +I+   + + +  V  +   A   +++E + I  +   K+++
Sbjct: 245 ACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVV 304

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ---VH 321
           +W  ++SG+ QNG   ++  +F  M  +G+   Q     V+K +A+   +G+ +Q   +H
Sbjct: 305 SWVALLSGYAQNGMAYKSMGVFRNMLSDGI---QPDAVAVVKILAASSELGIFQQALCLH 361

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
              V++ F S+ ++  SLI+ Y KCG + DAVK+FK     D+V  +SMI AY   G G 
Sbjct: 362 GYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGG 421

Query: 382 EALKLYLEM--------------QDREINPDSFVCSSLLNA------------------- 408
           EAL+++ +M                 ++ P   + S  L                     
Sbjct: 422 EALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLG 481

Query: 409 ----CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
                     ++       +I  +G   D+        MY     ID A   F +IP+  
Sbjct: 482 HFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPC 541

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLE-------DGVLPNHITLVSVLCACNHAG 514
              W+ MI G A  GR   +L+++ +M+E        GV+PN ++++SVL AC + G
Sbjct: 542 SFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLG 598



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 212/429 (49%), Gaps = 37/429 (8%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L  +  AC  +G S+   ++H    K G   D F A  L  +YAK  +L+ A  VF +  
Sbjct: 7   LVDLFQAC-NNGRSV--SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGR 217
           HP++  WN+ +      +  +  L+LF  M  ++   P+ FT   ALKACAG+ + ELG+
Sbjct: 64  HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123

Query: 218 QLHCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
            +H    K  EI SD  VG  LV++Y+KCG M EA  +F      + + W  +++G+ QN
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQN 183

Query: 277 GGDMEAASLFPWM--------------------------------YREGVGFDQTTLSTV 304
               EA +LF  M                                + +    D  + ST+
Sbjct: 184 NDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTM 243

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           +   A+ +A      +    ++  FE +   V S + A     ++E+  KI K +   D+
Sbjct: 244 IACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDV 303

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V+  ++++ YAQ G+  +++ ++  M    I PD+     +L A + L  ++Q   +H +
Sbjct: 304 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 363

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           +++ GF S+ F G SL+ +Y+KCGS+ DA + F  +  R +V WS+MI     HGRG EA
Sbjct: 364 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 423

Query: 485 LQMFGQMLE 493
           L++F QM++
Sbjct: 424 LEIFDQMIQ 432



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 21/322 (6%)

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q+H+   KT    D +    L   Y KC  ++ A K+F E+   ++    S + +Y +  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 379 LGEEALKLY-LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFA 436
             EE L+L+ L +      PD+F     L ACA L   E GK +H    K   + SD F 
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE--- 493
           G++LV +Y+KCG + +A + F E      V W++M+ G  Q+   +EAL +F QM+    
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 494 -DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            DG LP    + S+L      G    A + F  M +K  I      ++ MI         
Sbjct: 202 FDGDLP---LVNSLLNLYAKTGCEKIAANLFSKMPEKDVIS-----WSTMIACYANNEAA 253

Query: 553 QEAMELVDTM---PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
            EA+ L   M    F+ N+    + L A  + +N+E G+   ++  A+  +  S   LLS
Sbjct: 254 NEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKI--AVWKDVVSWVALLS 311

Query: 610 NIYASAGM-WDNVAKVRRFMKD 630
             YA  GM + ++   R  + D
Sbjct: 312 G-YAQNGMAYKSMGVFRNMLSD 332



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 28/199 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L  G   H  V+ TGF+ D  VA +++ MY+KCG+   +R LFD    + 
Sbjct: 590 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 649

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---------- 110
           +V W+++ + Y       +A+  F +MV +G+RP+  + + +++AC+ SG          
Sbjct: 650 LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 709

Query: 111 ----DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSW 165
               + ++ RK+  Y+              +VD+  + G L +AV + +++   PD   W
Sbjct: 710 LMTEEFVIARKLSNYA-------------CMVDLLGRAGQLSEAVDLIENMPVEPDASIW 756

Query: 166 NAVIAGCVLHEHNDWALKL 184
            +++  C +H + D A K+
Sbjct: 757 GSLLGACRIHNNLDLAEKI 775


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/555 (40%), Positives = 342/555 (61%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +Q+H  +    I  D IV   L+ M AK   +  A ++F+ M E++ ++W+++I G ++N
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G        F  + R G   D  +L  V+K+      + + + +H+  +K     D+++ 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           ++L+D Y KCG +++A ++F      DLV  T MI  YA+ G   E+  L+ +M+     
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD     +++NACA L A  + + VH ++    +  D   G ++++MYAKCGSID +   
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +  + ++SWSAMIG    HG+G+EAL++F  ML  G++PN IT +S+L AC+HAGLV
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            +    F  M   +G++P  +HY CM+D+LGRAG+  +A+ L++ M  + +  +W A LG
Sbjct: 320 DDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLG 379

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A RI++ V++ + AA++L +++ +    ++LLSNIYA+AG W +VAK+R  M   +LKK 
Sbjct: 380 ACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKI 439

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           PG +WIEV + +Y F  GD SH RS EIY  L  +S  L  AGYVP   + LHDV+E  K
Sbjct: 440 PGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVK 499

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
             +L+ HSEKLA+AFGLIATP G  IR+ KNLR+C DCH+  + +S I  R+IIVRD NR
Sbjct: 500 LGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANR 559

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF+ G CSCG YW
Sbjct: 560 FHHFKEGICSCGDYW 574



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 7/407 (1%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           +++F   QVH  V  TG   D  VAN L+ M AK  + + +  LF+ + ER  VSW+ + 
Sbjct: 14  RNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMI 73

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
             +V     E     F+E++ +G +P+ FSL  +I AC  +   ++GR IH   +K G  
Sbjct: 74  GGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLH 133

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D F  + LVDMYAK G +++A  +F  +   D+V+   +IAG       + +  LF QM
Sbjct: 134 LDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQM 193

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +     P+     + + ACA +      R +H  +       D  +G  ++DMYAKCGS+
Sbjct: 194 RRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSI 253

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D +R IF  M +KN+I+W+ +I  +  +G   EA  LF  M   G+  ++ T  ++L + 
Sbjct: 254 DSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYAC 313

Query: 309 ASFQAIGVCKQVHAL-SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLV 365
           +    +    Q+ +L SV      D      ++D  G+ G ++ A+++ +  E    + +
Sbjct: 314 SHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGI 373

Query: 366 ACTSM--ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            C  +     + Q  L E+A KL L +Q +  NP  ++  S + A A
Sbjct: 374 WCAFLGACRIHRQVDLAEKAAKLLLSLQTQ--NPGHYILLSNIYANA 418



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +++H      G   D+  AN L+ M AK  +L  A  +F  +E  D VSW+ +I G V +
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
              +   + F+++  +   P+ F+    +KAC       +GR +H +++K  +  D  V 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LVDMYAKCG +D A+ +F  MP+K+L+   ++I+G+ + G   E+  LF  M R+G  
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D+  + T++ + A   A+   + VH       +  D  +  ++ID Y KCG ++ + +I
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      ++++ ++MI AY   G G EAL+L+  M +  I P+     SLL AC++    
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 416 EQGKQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAM 471
           + G Q+  +  + +G   D      +V++  + G +D A R    +    D GI  W A 
Sbjct: 320 DDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGI--WCAF 377

Query: 472 IGGLAQH 478
           +G    H
Sbjct: 378 LGACRIH 384



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 145/269 (53%), Gaps = 4/269 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC     L +G  +H  V+  G   D FV ++LV MYAKCG   ++++LFD +P++ 
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKD 166

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+   + + Y  C    E+   F +M   G  P++ ++ +++NACA  G     R +H 
Sbjct: 167 LVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHD 226

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y     Y  D+    A++DMYAK G+++ +  +F  +E  +++SW+A+I     H     
Sbjct: 227 YVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGRE 286

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           AL+LF  M +S I PN  T+ S L AC+   L + G QL  SL+ +     P V     +
Sbjct: 287 ALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLF-SLMSVSYGVRPDVKHYTCM 345

Query: 239 VDMYAKCGSMDEA-RMIFHLMPEKNLIAW 266
           VD+  + G +D+A R+I ++  EK+   W
Sbjct: 346 VDLLGRAGRLDQALRLIENMEVEKDEGIW 374



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 12/172 (6%)

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           ++PD F+  S L  C N+    Q KQVH  +   G + D    N L+ M AK   +  A 
Sbjct: 1   MDPDFFI--STLFKCRNIF---QIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAH 55

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA- 513
             F+++ +R  VSWS MIGG  ++G  +   Q F +++  G  P++ +L  V+ AC    
Sbjct: 56  LLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM 115

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMP 563
           GL+     H   ++    +    +++ C  ++D+  + G    A +L D MP
Sbjct: 116 GLIMGRLIHSTVLKNGLHL----DNFVCSTLVDMYAKCGMIDNAKQLFDRMP 163


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/613 (40%), Positives = 373/613 (60%), Gaps = 41/613 (6%)

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV----GLVDMYAKCGSMDE 250
           P    Y + LK C      + G+Q+H       IK+   +G+     L+DMYAKCGS+ +
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHA-----HIKTSGSIGLYISNRLLDMYAKCGSLVD 171

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW------------- 288
           A  +F  M  ++L +WNI+ISG+++ G   +A +LF          W             
Sbjct: 172 AEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRP 231

Query: 289 -----MYREGVGFD-----QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
                +YR     D     + T+S+ L + A+  ++ + K++H   ++   +SD+ +  S
Sbjct: 232 EEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCS 291

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D YGKCG +E+A  IF +    D+V+ T+MI  Y + G  EE   L+  + +  I P+
Sbjct: 292 LLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPN 351

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            F  + +LNACA+L+A + GKQ+H ++++ GF S + A ++LV+MY+KCG I++A   F 
Sbjct: 352 DFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFE 411

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            +P   + SW++++ G AQHG+  +AL  F  +L+ G  P+ I  + VL AC HAGLV +
Sbjct: 412 ILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDK 471

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
              +F S+++K G+    +HYAC+ID+L RAG+F EA  +++ MP + +  +W ALLG  
Sbjct: 472 GLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGC 531

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+ N+E+ + AA+ LF IEPE  +T+V L+NIYASAGM    A +R  M    + K+PG
Sbjct: 532 RIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPG 591

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
           MSWIE++ +V+ F+VGD SH +SKEI   L E+S  + + GYVP     LHDVE  +KE+
Sbjct: 592 MSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEE 651

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L +HSEKLAVAFG+I+TP G  I+V KNLR CVDCH + +FIS I  R+IIVRD NRFH
Sbjct: 652 NLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFH 711

Query: 759 HFRNGSCSCGGYW 771
            F  GSCSC  YW
Sbjct: 712 CFEGGSCSCKDYW 724



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 232/453 (51%), Gaps = 44/453 (9%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWN-------- 166
           G+++H + IK      ++ +N L+DMYAK G+L DA  VF ++ H D+ SWN        
Sbjct: 138 GKQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVK 196

Query: 167 -----------------------AVIAGCVLHEHNDWALKLFQQMKSSEINP-NMFTYTS 202
                                  A+I+GCV H   + AL+L++ M+  + +  N  T +S
Sbjct: 197 GGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISS 256

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           AL A A +    +G+++H  +++M + SD +V   L+DMY KCGS++EAR IF  M E++
Sbjct: 257 ALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERD 316

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           +++W  +I  +L+NG   E  +LF  +    +  +  T + VL + A   A  + KQ+HA
Sbjct: 317 VVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHA 376

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             V+  F+S     ++L+  Y KCG +E+A  +F+     DL + TS++  YAQ G  ++
Sbjct: 377 YMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDK 436

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSDTFAGNSL 440
           AL  +  +      PD      +L+ACA+    ++G + + H I  K G          +
Sbjct: 437 ALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLE-YFHSIKEKHGLTRTIDHYACI 495

Query: 441 VNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           +++ A+ G   +A+   +E+   PD+ I  W+A++GG   HG  + A +    + E  + 
Sbjct: 496 IDLLARAGQFTEAESIINEMPIKPDKYI--WAALLGGCRIHGNLELAKRAAKSLFE--IE 551

Query: 498 P-NHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           P N  T V++      AG+ AE  +  E+M+ +
Sbjct: 552 PENPATYVTLANIYASAGMRAEEANIRETMDSR 584



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 245/553 (44%), Gaps = 95/553 (17%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C  ++ L  G QVH  +  +G     +++N L+ MYAKCG+ +D+ ++FD +  R 
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRD 183

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNE--FSLSSMINACAGSG-------- 110
           + SWN + S YV     E+A   F +M      PN   FS +++I+ C            
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKM------PNRDNFSWTAIISGCVQHNRPEEALEL 237

Query: 111 ---------------------------DSL-LGRKIHGYSIKLGYDSDMFSANALVDMYA 142
                                       SL +G+KIHG+ +++G DSD     +L+DMY 
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYG 297

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K G++E+A  +F  +E  D+VSW  +I   + +   +    LF+ + +S I PN FT+  
Sbjct: 298 KCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            L ACA +  ++LG+Q+H  ++++   S       LV MY+KCG ++ A+ +F ++P+ +
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPD 417

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           L +W  ++ G+ Q+G   +A   F  + + G   D      VL + A           HA
Sbjct: 418 LFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACA-----------HA 466

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             V    E      +S+ + +G              +  +D  AC  +I   A+ G   E
Sbjct: 467 GLVDKGLE----YFHSIKEKHGL-------------TRTIDHYAC--IIDLLARAGQFTE 507

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           A  +  EM    I PD ++ ++LL  C      E  K+    + +     +     +L N
Sbjct: 508 AESIINEMP---IKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIE-PENPATYVTLAN 563

Query: 443 MYAKCGSIDDADRAFSEIPDRGIV-----SWSAMIG-------GLAQHGRGKEALQMFGQ 490
           +YA  G   +       +  RGIV     SW  +         G   H + KE L+   +
Sbjct: 564 IYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSE 623

Query: 491 ----MLEDGVLPN 499
               M E G +P+
Sbjct: 624 LSKRMKEVGYVPD 636



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 39/242 (16%)

Query: 293 GVGFDQTTLSTVLKSVASF----QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           GV F    L    K V S     + +    Q H       F+  D  +N L D+      
Sbjct: 35  GVEFQIQVLKINGKEVKSLIILTRDLTTPSQTHIGKKIILFDGKDAYINRLCDS------ 88

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
                K+FKE  A+D++   S +          EA++L   ++     P + +  +LL  
Sbjct: 89  -----KLFKE--AIDILCGQSRL---------REAVQLLYRIE----KPYASIYLTLLKF 128

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C    A ++GKQVH HI   G +   +  N L++MYAKCGS+ DA++ F E+  R + SW
Sbjct: 129 CLKQRALKEGKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSW 187

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPN--HITLVSVLCACNHAGLVAEAKHHFESM 526
           + MI G  + G  ++A  +F +M      PN  + +  +++  C       EA   +  M
Sbjct: 188 NIMISGYVKGGNFEKARNLFDKM------PNRDNFSWTAIISGCVQHNRPEEALELYRLM 241

Query: 527 EK 528
           +K
Sbjct: 242 QK 243


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 373/624 (59%), Gaps = 9/624 (1%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           ++  D+ SWN+VIA       +  AL+ F  M+   + P   ++  A+KAC+ +     G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +Q H        +SD  V   L+ MY+ CG +++AR +F  +P++N+++W  +I G+  N
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 277 GGDMEAASLFPWMYRE------GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G  ++A SLF  +  E       +  D   + +V+ + +   A G+ + +H+  +K  F+
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215

Query: 331 SDDYIVNSLIDAYGKCGH--VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
               + N+L+DAY K G   V  A KIF +    D V+  S+++ YAQ G+  EA  ++ 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275

Query: 389 EM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            + +++ +  +    S++L A ++  A   GK +H  +I+ G   D   G S+++MY KC
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G ++ A  AF  + ++ + SW+AMI G   HG   +AL++F  M++ GV PN+IT VSVL
Sbjct: 336 GRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+HAGL     H F +M+ +FG++P  EHY CM+D+LGRAG  Q+A +L+  M  + +
Sbjct: 396 AACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPD 455

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           + +W +LL A RI+KNVE+ + +   LF ++P     ++LLS+IYA +G W +V +VR  
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMT 515

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MK+  L K PG S +E+  +V+ F +GD  H + ++IY  L E++  L +AGYV    + 
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
            HDV+E EKE  L  HSEKLA+AFG++ T PG+T+ V KNLR+C DCH   + ISKIV R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           E +VRD  RFHHF++G CSCG YW
Sbjct: 636 EFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 231/478 (48%), Gaps = 51/478 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +KAC+S  D+F G Q H      G+ SD FV+++L+VMY+ CG   D+R++FD IP+R++
Sbjct: 83  IKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGDSLLG 115
           VSW S+   Y       +AV  FK++++      + +  +   + S+I+AC+      L 
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLT 202

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA--VFKDIEHPDIVSWNAVIAGCV 173
             IH + IK G+D  +   N L+D YAK G    AVA  +F  I   D VS+N++++   
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
               ++ A  +F+++ K   +  N  T ++ L A +      +G+ +H  +I+M ++ D 
Sbjct: 263 QSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           IVG  ++DMY KCG ++ AR+ F  M  KN+ +W  +I+G+  +G   +A  LFP M   
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382

Query: 293 GVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           GV  +  T  +VL   S A    +G     +A+  +   E        ++D  G+ G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHDVG-WHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A                                  Y  +Q  ++ PDS + SSLL AC 
Sbjct: 442 KA----------------------------------YDLIQKMKMEPDSIIWSSLLAAC- 466

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGIV 466
               ++  +   + + +   +  +  G  ++  ++YA  G   D +R    + +RG+V
Sbjct: 467 --RIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLV 522



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 188/372 (50%), Gaps = 9/372 (2%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           + +  V SWNS+ +         EA+  F  M    + P   S    I AC+   D   G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++ H  +   GY SD+F ++AL+ MY+  G LEDA  VF +I   +IVSW ++I G  L+
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 176 EHNDWALKLFQQM--KSSEINPNMFT----YTSALKACAGMELKELGRQLHCSLIKMEIK 229
            +   A+ LF+ +  + ++ +  MF       S + AC+ +  K L   +H  +IK    
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215

Query: 230 SDPIVGVGLVDMYAKCGS--MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
               VG  L+D YAK G   +  AR IF  + +K+ +++N ++S + Q+G   EA  +F 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275

Query: 288 WMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            + +E  V F+  TLSTVL +V+   A+ + K +H   ++   E D  +  S+ID Y KC
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G VE A   F      ++ + T+MI  Y   G   +AL+L+  M D  + P+     S+L
Sbjct: 336 GRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 407 NACANLSAYEQG 418
            AC++   ++ G
Sbjct: 396 AACSHAGLHDVG 407



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 7/278 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN--FIDSRRLFDAIPE 58
           V+ AC+      L   +H  V+  GFD    V N+L+  YAK G      +R++FD I +
Sbjct: 189 VISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRK 117
           +  VS+NS+ S Y       EA   F+ ++   +   N  +LS+++ A + SG   +G+ 
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKC 308

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH   I++G + D+    +++DMY K G +E A   F  +++ ++ SW A+IAG  +H H
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGV 236
              AL+LF  M  S + PN  T+ S L AC+   L ++G     ++ K     +P +   
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAM-KGRFGVEPGLEHY 427

Query: 237 G-LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           G +VD+  + G + +A  +   M  E + I W+ +++ 
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA 465


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/680 (36%), Positives = 403/680 (59%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+C +   + LG  VH      G D D FV ++L+ MYA  G   D+R++FD + ER 
Sbjct: 152 VVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERD 211

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN +   YV    +  AV  F +M  SG  PN  +L+  ++  A   D   G ++H 
Sbjct: 212 CVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT 271

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G +S++  AN LV MYAK   L+D   +F  +   D+V+WN +I+GCV +   D 
Sbjct: 272 LAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQ 331

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF  M+ S I P+  T  S L A   +     G++LH  +++  +  D  +   LVD
Sbjct: 332 ALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVD 391

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++  A+ ++      +++  + +ISG++ NG   EA  +F ++  +G+  +   
Sbjct: 392 IYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVA 451

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + AS  A+ + +++H+ ++K A+E   Y+ ++L+D Y KCG ++ +  IF + S
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D V   SMI+++AQ G  EEAL L+ EM    +   +   SS+L+ACA+L A   GK+
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE 571

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK    +D FA ++L++MY KCG+++ A R F  +P++  VSW+++I     +G 
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE++ +   M E+G   +H+T ++++ AC HAG V E    F  M +++ I P  EH+A
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFA 691

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+  RAGK  +AMEL+  MPF+ +A +WGALL A R+++NVE+ + A++ LF ++P 
Sbjct: 692 CMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPH 751

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VL+SNI A AG WD V+KVRR MKD K++K PG SW++V +  + F   D+SH  
Sbjct: 752 NSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPD 811

Query: 661 SKEIYAKLDEVSDLLNKAGY 680
           S++IY  L  +   L + G+
Sbjct: 812 SEDIYMSLKSILLELREEGH 831



 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 187/591 (31%), Positives = 308/591 (52%), Gaps = 8/591 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL+ C S   L LGLQVHG  V  G   +D  +   LV MY     F D+  +F ++P  
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 60  SV---VSWNSLFSCYVHCDFLEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLL 114
           +    + WN L            A+ F+ +M    S   P+  +   ++ +CA  G   L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           GR +H  +  LG D DMF  +AL+ MYA  G L DA  VF  +   D V WN ++ G V 
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A++LF  M++S   PN  T    L   A       G QLH   +K  ++S+  V
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              LV MYAKC  +D+   +F LMP  +L+ WN +ISG +QNG   +A  LF  M + G+
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL ++L ++         K++H   V+     D ++V++L+D Y KC  V  A  
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           ++  S A+D+V  ++MI+ Y   G+ +EA+K++  + ++ I P++   +S+L ACA+++A
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            + G+++H + +K  +    +  ++L++MYAKCG +D +   FS+I  +  V+W++MI  
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISS 524

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            AQ+G  +EAL +F +M  +GV  +++T+ SVL AC     +   K     +  K  I+ 
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGK-EIHGVVIKGPIRA 583

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
                + +ID+ G+ G  + A  + ++MP + N   W +++ +   Y  V+
Sbjct: 584 DLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIASYGAYGLVK 633


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/728 (34%), Positives = 411/728 (56%), Gaps = 2/728 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ +C    DL LG  VH   +  GF+SD ++ N+L+ MY++  +  ++R +F+ +  R 
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNSL S Y    F E+A+  + +  ++G+ P+ F++SS++ AC        G  +HG
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              K+G   D+   N L+ MY K   L +A  VF  +   D V+WN +I G      ++ 
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++KLF  M    + P+M + TS ++AC      ++G+ +H  LI    + D +    L+D
Sbjct: 307 SVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +  A+ +F     K+ + WN +I+G+ Q+G   E    F  M  E    D  T
Sbjct: 366 MYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP-DSVT 424

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L   +    I   + +H   +K  FE++  I NSL+D Y KCG ++D +K+F   S
Sbjct: 425 FVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D+++  ++I +   F       ++  EM+   + PD      +L  C+ L+   QGK+
Sbjct: 485 AHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H +I K GF S+   GN+L+ MY+KCGS+++  + F  + ++ +V+W+A+I     +G 
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GK+AL+ F  M   GVLP+ +  ++ + AC+H+G+V E    F+ M+  + ++P  EHYA
Sbjct: 605 GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYA 664

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C++D+L R+G   +A E + +MP + +AS+WGALL A R   N  + Q  ++ +  +  +
Sbjct: 665 CVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSD 724

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +VL+SNIYA+ G WD V  VR  MK   LKKEPG SWIE++ +VY F  GD+S  +
Sbjct: 725 DTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQ 784

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
             ++   L+ +  L+ K GYV  ++  LHDVEE +K  +L  HSE+LA+AFGL+ T PG+
Sbjct: 785 YDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGS 844

Query: 721 TIRVKKNL 728
            + +   L
Sbjct: 845 PLLIFPTL 852



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 304/582 (52%), Gaps = 5/582 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
           +LK  +S K+      VH +++ +G       +  L+  YA+  + I S  +F +I P  
Sbjct: 25  LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V  WNS+     H     +A+ ++ EM    ++P+ F+  S+IN+CA   D  LG  +H
Sbjct: 85  NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            +++++G++SD++  NAL+DMY++  +L++A  VF+++ + D VSWN++I+G   +   +
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL ++ + + + + P+ FT +S L AC  +   + G  +H  + K+ I  D I+G GL+
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLL 264

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY K   + EAR +F  M  K+ + WN +I G+ Q G    +  LF  M  +G   D  
Sbjct: 265 SMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDML 323

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           ++++ +++      + V K VH   + + FE D    N LID Y KCG +  A ++F  +
Sbjct: 324 SITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTT 383

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D V   S+I  Y Q G  +E L+ + +M   E  PDS     LL+  + L+   QG+
Sbjct: 384 KCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGR 442

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H  +IKFGF ++   GNSL+++YAKCG +DD  + FS +    I+SW+ +I       
Sbjct: 443 GIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFD 502

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
                 QM  +M  +G++P+  T++ +L  C+   +  + K     + K  G +      
Sbjct: 503 DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIG 561

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
             +I++  + G  +  +++   M  + +   W AL+ A  +Y
Sbjct: 562 NALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMY 602



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 250/502 (49%), Gaps = 8/502 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
            EF  SS++   + + ++   R +H   I  G    +  +  L+  YA+V +   +V+VF
Sbjct: 18  QEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVF 77

Query: 155 KDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           + I    ++  WN++I     +     AL  + +M+  ++ P+ FT+ S + +CA +   
Sbjct: 78  RSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDL 137

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           ELG  +H   ++M  +SD  +G  L+DMY++   +D AR +F  M  ++ ++WN +ISG+
Sbjct: 138 ELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGY 197

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
             NG   +A  ++      G+  D  T+S+VL +  S  A+     VH +  K     D 
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            I N L+  Y K   + +A ++F + +  D V   +MI  YAQ G  E ++KL+++M D 
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG 317

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + PD    +S + AC      + GK VH ++I  GF  DT A N L++MYAKCG +  A
Sbjct: 318 FV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F     +  V+W+++I G  Q G  KE L+ F +M++    P+ +T V +L   +  
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQL 435

Query: 514 GLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
             + + +  H + +  KFG +        ++D+  + G+  + +++   M      S W 
Sbjct: 436 ADINQGRGIHCDVI--KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WN 492

Query: 573 ALLGAARIYKNVEVG-QHAAEM 593
            ++ ++  + +  VG Q   EM
Sbjct: 493 TVIASSVHFDDCTVGFQMINEM 514


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/574 (40%), Positives = 359/574 (62%), Gaps = 2/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y + L  C        G+++H  +IK        +   L+ +Y KC  + +AR +F  MP
Sbjct: 93  YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           +KN+++W  +IS + Q G   EA +LF  M R     +  T +T+L S          +Q
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H++++K  +ES  ++ +SL+D Y K G + DA  +F      D+VACT++I+ YAQ GL
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 272

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEALKL+ ++Q   +N +S   +S+L A + L+A   GKQVH H+++ G  S     NS
Sbjct: 273 DEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNS 332

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLP 498
           L++MY+KCG++  A R F  +P+R  +SW+AM+ G ++HG  +E L++F  M E+  V P
Sbjct: 333 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 392

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           + IT ++VL  C+H  L       F +M   K GI+P   HY C++D+LGRAG+ +EA +
Sbjct: 393 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFD 452

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MPF   A++WG+LLG+ R++ +VE+G    + L  +EPE +  +V+LSN+YASAG 
Sbjct: 453 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGK 512

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W+++  +R  M++  + KEPG SW+E+   V+TF   D +H R +E+  K+ E+S    +
Sbjct: 513 WEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKE 572

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            GYVP +   L+DV+E +KE++L  HSEKLA+AFGLIATP G TIRV KNLRICVDCH+ 
Sbjct: 573 DGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSF 632

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +F+S++ +R +I+RD NRFH+   G CSCG YW
Sbjct: 633 AKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 250/520 (48%), Gaps = 58/520 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S++ +  G +VH  ++ T +    ++   L+V+Y KC    D+R +FD +P+++
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKN 155

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y    F  EA+  F EM+ S   PN F+ ++++ +C GS     GR+IH 
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 215

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK  Y+S MF  ++L+DMYAK G + DA  VF  +   D+V+  A+I+G      ++ 
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF+Q++   +N N  TY S L A +G+     G+Q+H  +++    S  ++   L+D
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 335

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCG++  AR IF  MPE+  I+WN ++ G+ ++G   E   LF  M  E  V  D  
Sbjct: 336 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI 395

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T   VL   S    + +G+    + ++ K   E D      ++D  G+ G VE+A    K
Sbjct: 396 TYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIK 455

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +   V                                  P + +  SLL +C   S  E 
Sbjct: 456 KMPFV----------------------------------PTAAIWGSLLGSCRVHSDVEI 481

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDD--------ADRAFSEIPDRGIVS 467
           G  V   +++   +    AGN ++  N+YA  G  +D         ++A ++ P R  V 
Sbjct: 482 GIIVGQKLLE---LEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVE 538

Query: 468 WSAMIGGL----AQHGRGKEALQMFGQM----LEDGVLPN 499
              ++         H R +E  +   ++     EDG +P+
Sbjct: 539 LDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPD 578



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 202/382 (52%), Gaps = 4/382 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           +++N C        G+++H + IK  Y   ++    L+ +Y K   L DA  +F ++   
Sbjct: 95  TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+I+          AL LF +M  S+  PN FT+ + L +C G    E GRQ+H
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              IK   +S   VG  L+DMYAK G + +A  +FH +PE++++A   +ISG+ Q G D 
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  LF  +  EG+  +  T ++VL +++   A+   KQVH+  +++   S   ++NSLI
Sbjct: 275 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 334

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDS 399
           D Y KCG+V  A +IF        ++  +M+  Y++ G+  E L+L+ L  ++ ++ PDS
Sbjct: 335 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 394

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
               ++L+ C++    + G ++  +++  K G   D      +V++  + G +++A    
Sbjct: 395 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 454

Query: 458 SEIPDRGIVS-WSAMIGGLAQH 478
            ++P     + W +++G    H
Sbjct: 455 KKMPFVPTAAIWGSLLGSCRVH 476


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/681 (37%), Positives = 387/681 (56%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+AC   + +  G QVHG+ V  G D + +V  +L+ +YAK G    +  +FDA+P ++ 
Sbjct: 121 LRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNP 180

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+W ++ + Y        A+  F +M L G+RP+ F L+S ++AC+  G    GR+ HGY
Sbjct: 181 VTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGY 240

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           + ++  ++D    NAL+D+Y K   L  A  +F  +E+ ++VSW  +IAG + +  +  A
Sbjct: 241 AYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEA 300

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + +F Q+      P++F   S L +C  +     GRQ+H   IK  ++SD  V   L+DM
Sbjct: 301 MAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDM 360

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKC  + EAR +F  + E + I++N +I G+ + G    A  +F  M    +     T 
Sbjct: 361 YAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTF 420

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L   +S  AI + KQ+H L VK+    D Y  +SLID Y K   VEDA  +F     
Sbjct: 421 VSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHN 480

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D+V   +MI   AQ   GEEA+KL+ ++Q   + P+ F   +L+   + L +   G+Q 
Sbjct: 481 RDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQF 540

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  IIK G  SD    N+L++MYAKCG I +    F     + ++ W++MI   AQHG+ 
Sbjct: 541 HAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQA 600

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           +EAL +F  M   GV PN++T V VL AC HAGLV E   HF+ M+ K+ I+P  EHYA 
Sbjct: 601 EEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYAS 660

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++++ GR+GK   A E ++ MP +  A+VW +LL A  ++ NVE+G++A EM    +P  
Sbjct: 661 VVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPAD 720

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S   VL+SNIYAS G+W +  K+R+ M    + KEPG SWIEV  +V+TF    R H  +
Sbjct: 721 SGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEA 780

Query: 662 KEIYAKLDEVSDLLNKAGYVP 682
             IY+ LDE++ +L   GY+P
Sbjct: 781 DVIYSLLDELTSILKNGGYLP 801



 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 204/627 (32%), Positives = 335/627 (53%), Gaps = 12/627 (1%)

Query: 18  HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           H   V TG   D F+AN L+  Y+K G   D+RRLFD +P +++VSW S  S +      
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 78  EEAVCFFK--EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           E+AV  F   +    G  PNEF L+S + ACA S     G+++HG ++++G D +++   
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           AL+++YAKVG ++ A+ VF  +   + V+W AVI G         AL+LF +M    + P
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + F   SA+ AC+ +   E GRQ H    ++ +++D  V   L+D+Y KC  +  AR +F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  +NL++W  +I+G++QN  D EA ++F  + +EG   D    +++L S  S  AI 
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             +QVHA ++K   ESD+Y+ NSLID Y KC H+ +A  +F+  +  D ++  +MI  Y+
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           + G    A+ ++ +M+   + P      SLL   ++ SA E  KQ+H  I+K G   D +
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLY 453

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
           AG+SL+++Y+K   ++DA   F+ + +R +V W+AMI GLAQ+ +G+EA+++F Q+   G
Sbjct: 454 AGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSG 513

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           + PN  T V+++     A  +    H   F +   K G          +ID+  + G  +
Sbjct: 514 LAPNEFTFVALVTV---ASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIK 570

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML--FAIEPEKSSTHVLLSNI 611
           E   L ++     +   W +++     +   E   +   M+    +EP    T V + + 
Sbjct: 571 EGRLLFES-TLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY-VTFVGVLSA 628

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPG 638
            A AG+ D   +   FMK  K   EPG
Sbjct: 629 CAHAGLVDEGLRHFDFMK-TKYAIEPG 654



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 209/403 (51%), Gaps = 7/403 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L +C S   ++ G QVH   +    +SDE+V NSL+ MYAKC +  ++R +F+A+ E  
Sbjct: 322 ILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDD 381

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+N++   Y     L  A+  F +M    ++P+  +  S++   +      L ++IHG
Sbjct: 382 AISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHG 441

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G   D+++ ++L+D+Y+K   +EDA AVF  + + D+V WNA+I G   +E  + 
Sbjct: 442 LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEE 501

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KLF Q++ S + PN FT+ + +   + +     G+Q H  +IK    SD  V   L+D
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALID 561

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG + E R++F     K++I WN +IS + Q+G   EA  +F  M   GV  +  T
Sbjct: 562 MYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVT 621

Query: 301 LSTVLKSVASFQAIGV-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
              VL + A    +    +    +  K A E       S+++ +G+ G +  A K F E 
Sbjct: 622 FVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLH-AAKEFIER 680

Query: 360 SAVDLVACT--SMITAYAQFG---LGEEALKLYLEMQDREINP 397
             ++  A    S+++A   FG   +G  A ++ L     +  P
Sbjct: 681 MPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGP 723



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 167/320 (52%), Gaps = 2/320 (0%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L   AG  L  L    H   +      D  +   L+  Y+K G + +AR +F  MP KNL
Sbjct: 18  LSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNL 77

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           ++W   IS H Q+G + +A +LF    R   G   ++  L++ L++ A  +A+   +QVH
Sbjct: 78  VSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVH 137

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
            ++V+   + + Y+  +LI+ Y K G ++ A+ +F      + V  T++IT Y+Q G G 
Sbjct: 138 GVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGG 197

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
            AL+L+ +M    + PD FV +S ++AC+ L   E G+Q H +  +    +D    N+L+
Sbjct: 198 VALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALI 257

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           ++Y KC  +  A + F  + +R +VSW+ MI G  Q+    EA+ MF Q+ ++G  P+  
Sbjct: 258 DLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVF 317

Query: 502 TLVSVLCACNHAGLVAEAKH 521
              S+L +C     + + + 
Sbjct: 318 ACASILNSCGSLAAIWQGRQ 337


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/657 (37%), Positives = 370/657 (56%), Gaps = 1/657 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++ H   ++LG   D +  N L+         + A  VF    HP+I  +N +I G V +
Sbjct: 20  KQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSN 79

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDPIV 234
           +    A+ ++  M+     P+ FT+   LKAC  +     +G  LH  +IK     D  V
Sbjct: 80  DAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFV 139

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             GLV +Y+K G + +AR +F  +PEKN+++W  +I G++++G   EA  LF  +   G+
Sbjct: 140 KTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGL 199

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL  +L + +    +   + +     ++    + ++  SL+D Y KCG +E+A +
Sbjct: 200 RPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARR 259

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F      D+V  +++I  YA  G+ +EAL ++ EMQ   + PD +    + +AC+ L A
Sbjct: 260 VFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGA 319

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            E G      +    F+S+   G +L++ YAKCGS+  A   F  +  +  V ++A+I G
Sbjct: 320 LELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISG 379

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
           LA  G    A  +FGQM++ G+ P+  T V +LC C HAGLV +   +F  M   F + P
Sbjct: 380 LAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTP 439

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHY CM+D+  RAG   EA +L+ +MP +AN+ VWGALLG  R++K+ ++ +H  + L
Sbjct: 440 TIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQL 499

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             +EP  S  +VLLSNIY+++  WD   K+R  +    ++K PG SW+EV   V+ F VG
Sbjct: 500 IELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVG 559

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH  S +IY KL+ +   L +AGY P  E  L DVEE EKE  L  HSEKLAVAF LI
Sbjct: 560 DTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALI 619

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T     IRV KNLR+C DCH + + +SK+  REIIVRD NRFHHF  GSCSC  YW
Sbjct: 620 STGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 228/474 (48%), Gaps = 51/474 (10%)

Query: 1   VLKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VLKACT     F +GL +H +V+ TGFD D FV   LV +Y+K G   D+R++FD IPE+
Sbjct: 107 VLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEK 166

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSW ++   Y+      EA+  F+ ++  G+RP+ F+L  ++ AC+  GD   GR I 
Sbjct: 167 NVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWID 226

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           GY  + G   ++F A +LVDMYAK G++E+A  VF  +   D+V W+A+I G   +    
Sbjct: 227 GYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPK 286

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL +F +M+   + P+ +       AC+ +   ELG      +   E  S+P++G  L+
Sbjct: 287 EALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALI 346

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D YAKCGS+ +A+ +F  M  K+ + +N VISG    G    A  +F  M + G+  D  
Sbjct: 347 DFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGN 406

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   +L           C   HA                        G V+D  + F   
Sbjct: 407 TFVGLL-----------CGCTHA------------------------GLVDDGHRYFSGM 431

Query: 360 SAVDLVACT-----SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           S+V  V  T      M+   A+ GL  EA  L   M    +  +S V  +LL  C     
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSM---PMEANSIVWGALLGGC----R 484

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLV---NMYAKCGSIDDADRAFSEIPDRGI 465
             +  Q+  H++K     + +     V   N+Y+     D+A++  S +  +G+
Sbjct: 485 LHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGM 538



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 234/523 (44%), Gaps = 18/523 (3%)

Query: 2   LKACTS--KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           LK C +   K L    Q H +++  G   D ++ N L+           +  +F   P  
Sbjct: 5   LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKI 118
           ++  +N+L    V  D   +AV  +  M   G  P+ F+   ++ AC        +G  +
Sbjct: 65  NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   IK G+D D+F    LV +Y+K G L DA  VF +I   ++VSW A+I G +     
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF+ +    + P+ FT    L AC+ +     GR +   + +     +  V   L
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSL 244

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMYAKCGSM+EAR +F  M EK+++ W+ +I G+  NG   EA  +F  M RE V  D 
Sbjct: 245 VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 304

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +  V  + +   A+ +      L     F S+  +  +LID Y KCG V  A ++FK 
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKG 364

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D V   ++I+  A  G    A  ++ +M    + PD      LL  C +    + G
Sbjct: 365 MRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG 424

Query: 419 KQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
            +       F  MS  F+          +V++ A+ G + +A      +P +   + W A
Sbjct: 425 HRY------FSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGA 478

Query: 471 MIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNH 512
           ++GG   H   + A  +  Q++E +     H  L+S + + +H
Sbjct: 479 LLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASH 521



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 1/165 (0%)

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
            L +  Q KQ H  +++ G   DT+  N L+       +   A   F++ P   I  ++ 
Sbjct: 12  GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           +I G+  +   ++A+ ++  M + G  P++ T   VL AC              S+  K 
Sbjct: 72  LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           G          ++ +  + G   +A ++ D +P + N   W A++
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAII 175


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/624 (37%), Positives = 374/624 (59%), Gaps = 9/624 (1%)

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           ++  D+ SWN+VIA       +  AL  F  M+   + P   ++  A+KAC+ +     G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +Q H        +SD  V   L+ MY+ CG +++AR +F  +P++++++W  +I G+  N
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155

Query: 277 GGDMEAASLFPWMY------REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G  ++A SLF  +        + +  D   L +V+ + +   A G+ + +H+  +K  F+
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 331 SDDYIVNSLIDAYGKCGH--VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
               + N+L+DAY K G   V  A KIF +    D V+  S+++ YAQ G+  EA +++ 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 389 EM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            + +++ +  ++   S++L A ++  A   GK +H  +I+ G   D   G S+++MY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G ++ A +AF  + ++ + SW+AMI G   HG   +AL++F  M++ GV PN+IT VSVL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+HAGL  E    F +M+ +FG++P  EHY CM+D+LGRAG  Q+A +L+  M  + +
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           + +W +LL A RI+KNVE+ + +   LF ++      ++LLS+IYA AG W +V +VR  
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MK+  L K PG S +E+  +V+ F +GD  H + ++IY  L E++  L +AGYV    + 
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
            HDV+E EKE  L  HSEKLA+AFG++ T PG+T+ V KNLR+C DCH   + ISKIV R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           E +VRD  RFHHF++G CSCG YW
Sbjct: 636 EFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 230/478 (48%), Gaps = 51/478 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +KAC+S  D+F G Q H      G+ SD FV+++L+VMY+ CG   D+R++FD IP+R +
Sbjct: 83  IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDI 142

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGDSLLG 115
           VSW S+   Y       +AV  FK++++        +  +   L S+I+AC+      L 
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA--VFKDIEHPDIVSWNAVIAGCV 173
             IH + IK G+D  +   N L+D YAK G    AVA  +F  I   D VS+N++++   
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
               ++ A ++F+++ K+  +  N  T ++ L A +      +G+ +H  +I+M ++ D 
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           IVG  ++DMY KCG ++ AR  F  M  KN+ +W  +I+G+  +G   +A  LFP M   
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382

Query: 293 GVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           GV  +  T  +VL   S A     G  +  +A+  +   E        ++D  G+ G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEG-WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A                                  Y  +Q  ++ PDS + SSLL AC 
Sbjct: 442 KA----------------------------------YDLIQRMKMKPDSIIWSSLLAAC- 466

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGIV 466
               ++  +   + + +   +  +  G  ++  ++YA  G   D +R    + +RG+V
Sbjct: 467 --RIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 210/436 (48%), Gaps = 15/436 (3%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           + +  V SWNS+ +         EA+  F  M    + P   S    I AC+   D   G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++ H  +   GY SD+F ++AL+ MY+  G LEDA  VF +I   DIVSW ++I G  L+
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155

Query: 176 EHNDWALKLFQQMKSSEINPN--MFT----YTSALKACAGMELKELGRQLHCSLIKMEIK 229
            +   A+ LF+ +   E + +  MF       S + AC+ +  K L   +H  +IK    
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 230 SDPIVGVGLVDMYAKC--GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
               VG  L+D YAK   G +  AR IF  + +K+ +++N ++S + Q+G   EA  +F 
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 288 WMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            + +   V F+  TLSTVL +V+   A+ + K +H   ++   E D  +  S+ID Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G VE A K F      ++ + T+MI  Y   G   +AL+L+  M D  + P+     S+L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 407 NACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PD 462
            AC++   + +G +  +    +FG          +V++  + G +  A      +   PD
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 463 RGIVSWSAMIGGLAQH 478
             I  WS+++     H
Sbjct: 456 SII--WSSLLAACRIH 469



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 3/211 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN--FIDSRRLFDAIPE 58
           V+ AC+      L   +H  V+  GFD    V N+L+  YAK G      +R++FD I +
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRK 117
           +  VS+NS+ S Y       EA   F+ +V + +   N  +LS+++ A + SG   +G+ 
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH   I++G + D+    +++DMY K G +E A   F  +++ ++ SW A+IAG  +H H
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACA 208
              AL+LF  M  S + PN  T+ S L AC+
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACS 399


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/707 (38%), Positives = 388/707 (54%), Gaps = 39/707 (5%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIE 158
           S I+ C+ S      +++H   ++ G   D FSA+ L    A      L+ A  +F  I 
Sbjct: 30  STIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIP 86

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGR 217
            P++ +WN +I           +  +F  +    E  PN FT+   +KA + ++   +G 
Sbjct: 87  QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGT 146

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H   IK+    D  +   LV  Y  CG +  A  +F  +  K++++WN +IS   Q  
Sbjct: 147 AVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGN 206

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              +A  LF  M RE V  +  T+  VL + A    +   + V +   +   + D  + N
Sbjct: 207 CPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCN 266

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM--------------------------- 370
           +++D Y KCG V+DA K+F E    D+ + T M                           
Sbjct: 267 AMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAA 326

Query: 371 ----ITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
               I+AY Q G  +EAL ++ E+Q  +I  PD     S L+ACA L A + G  +HV+I
Sbjct: 327 WNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI 386

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
            + G + +    +SLV+MYAKCGS++ A   F  + +R +  WSAMI GL  HGRGK A+
Sbjct: 387 KREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAI 446

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F +M E  V PN +T  +VLCAC+HAGLV E +  F  ME  +G+ P  +HYACM+DI
Sbjct: 447 DLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDI 506

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGRAG  +EAMEL++ M    +ASVWGALLGA  ++ NVE+G+ A++ L  +EP      
Sbjct: 507 LGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAI 566

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLLSNIYA  G W+ V+++R+ M+D +LKKEPG S IE    V+ F VGD +H  S  IY
Sbjct: 567 VLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIY 626

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           +KL+E++  L   GY P     L  +EE + KEQ L  HSEKLA+AFGL+   P   IRV
Sbjct: 627 SKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRV 686

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLRIC DCH   + +S++  R+I++RD  RFHHFR+G CSC  YW
Sbjct: 687 VKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 256/517 (49%), Gaps = 44/517 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG-NFID-SRRLFDAIPE 58
            +  C+S K L    +VH  ++ TG   D F A+ L    A    + +D +R LFD IP+
Sbjct: 31  TIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQ 87

Query: 59  RSVVSWNSLFSCYVHC-DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            ++ +WN+L   Y    D  +  V F   +      PN+F+   +I A +    S +G  
Sbjct: 88  PNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTA 147

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HG +IKL +  D++  N+LV  Y   G+L  A  +FK I   D+VSWN++I+       
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC 207

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGV 236
            + AL+LF +M+   + PN  T    L ACA     E GR + CS I+ + IK D  +  
Sbjct: 208 PEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWV-CSYIERKGIKVDLTLCN 266

Query: 237 GLVDMYAKCGSMDE-------------------------------ARMIFHLMPEKNLIA 265
            ++DMY KCGS+D+                               AR++F+ MP K + A
Sbjct: 267 AMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAA 326

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVG-FDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           WN++IS + QNG   EA ++F  +    +   D+ TL + L + A   AI +   +H   
Sbjct: 327 WNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI 386

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
            +     + ++++SL+D Y KCG +E A+++F      D+   ++MI      G G+ A+
Sbjct: 387 KREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAI 446

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK--FGFMSDTFAGNSLVN 442
            L+ EMQ+ ++ P+S   +++L AC++    ++G+ V  H ++  +G + +      +V+
Sbjct: 447 DLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGR-VFFHEMEPVYGVVPEMKHYACMVD 505

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           +  + G +++A    +E+      S W A++G  + H
Sbjct: 506 ILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 213/485 (43%), Gaps = 76/485 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KA +  K   +G  VHG+ +   F  D ++ NSLV  Y  CG+   + RLF  I  + 
Sbjct: 132 VIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKD 191

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ S +   +  E+A+  F +M    + PN  ++  +++ACA   D   GR +  
Sbjct: 192 VVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCS 251

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y  + G   D+   NA++DMY K G+++DA  +F ++   D+ SW  ++ G         
Sbjct: 252 YIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDA 311

Query: 174 ---------LHEHNDW---------------ALKLFQQMKSSEI-NPNMFTYTSALKACA 208
                    + E   W               AL +F +++ S+I  P+  T  S L ACA
Sbjct: 312 ARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACA 371

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +LG  +H  + +  I  +  +   LVDMYAKCGS+++A  +F+ + E+++  W+ 
Sbjct: 372 QLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSA 431

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I+G   +G    A  LF  M    V  +  T + VL           C   HA      
Sbjct: 432 MIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVL-----------CACSHA------ 474

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV-----DLVACTSMITAYAQFGLGEEA 383
                             G V++    F E   V     ++     M+    + G  EEA
Sbjct: 475 ------------------GLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEA 516

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           ++L  EM      P + V  +LL AC+     E G+     ++K     +  A   L N+
Sbjct: 517 MELINEMS---TTPSASVWGALLGACSLHMNVELGELASDQLLKLE-PRNHGAIVLLSNI 572

Query: 444 YAKCG 448
           YAK G
Sbjct: 573 YAKTG 577



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA--KCGSIDDADRAFSEIPD 462
           +L+     S+ +Q K+VH  +++ G   D F+ + L    A     ++D A   F +IP 
Sbjct: 28  ILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQ 87

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQML---EDGVLPNHITLVSVLCACNH--AGLVA 517
             + +W+ +I   A      ++  +F  +L   ED  LPN  T   V+ A +   A  V 
Sbjct: 88  PNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCED--LPNKFTFPFVIKAASELKASRVG 145

Query: 518 EAKH 521
            A H
Sbjct: 146 TAVH 149


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/574 (40%), Positives = 359/574 (62%), Gaps = 2/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y S L  C        G+++H  +IK        +   L+ +Y KC  + +AR +F  MP
Sbjct: 65  YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           ++N+++W  +IS + Q G   EA +LF  M R     +  T +T+L S          +Q
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H++++K  +ES  ++ +SL+D Y K G + DA  +F      D+VACT++I+ YAQ GL
Sbjct: 185 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 244

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEALKL+ ++Q   +N +S   +S+L A + L+A   GKQVH H+++ G  S     NS
Sbjct: 245 DEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNS 304

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLP 498
           L++MY+KCG++  A R F  +P+R  +SW+AM+ G ++HG  +E L++F  M E+  V P
Sbjct: 305 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 364

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           + IT ++VL  C+H  L       F +M   K GI+P   HY C++D+LGRAG+ +EA +
Sbjct: 365 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFD 424

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MPF   A++WG+LLG+ R++ +VE+G    + L  +EPE +  +V+LSN+YASAG 
Sbjct: 425 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGK 484

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W+++  +R  M++  + KEPG SW+E+   V+TF   D +H R +E+  K+ E+S    +
Sbjct: 485 WEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKE 544

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            GYVP +   L+DV+E +KE++L  HSEKLA+AFGLIATP G TIRV KNLRICVDCH+ 
Sbjct: 545 DGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSF 604

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +F+S++ +R +I+RD NRFH+   G CSCG YW
Sbjct: 605 AKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 249/520 (47%), Gaps = 58/520 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S++ +  G +VH  ++ T +    ++   L+V+Y KC    D+R +FD +P+R+
Sbjct: 68  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y    F  EA+  F EM+ S   PN F+ ++++ +C GS     GR+IH 
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK  Y+S MF  ++L+DMYAK G + DA  VF  +   D+V+  A+I+G      ++ 
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF+Q++   +N N  TY S L A +G+     G+Q+H  +++    S  ++   L+D
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 307

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCG++  AR IF  MPE+  I+WN ++ G+ ++G   E   LF  M  E  V  D  
Sbjct: 308 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI 367

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T   VL   S    + +G+    + ++ K   E D      ++D  G+ G VE+A    K
Sbjct: 368 TYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIK 427

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +   V                                  P + +  SLL +C   S  E 
Sbjct: 428 KMPFV----------------------------------PTAAIWGSLLGSCRVHSDVEI 453

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDD--------ADRAFSEIPDRGIVS 467
           G  V   +++   +    AGN ++  N+YA  G  +D         ++A ++ P R  V 
Sbjct: 454 GIIVGQKLLE---LEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVE 510

Query: 468 WSAMIGGL----AQHGRGKEALQMFGQM----LEDGVLPN 499
              ++         H R +E      ++     EDG +P+
Sbjct: 511 LDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPD 550



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 202/382 (52%), Gaps = 4/382 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S++N C        G+++H + IK  Y   ++    L+ +Y K   L DA  +F ++   
Sbjct: 67  SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+I+          AL LF +M  S+  PN FT+ + L +C G    E GRQ+H
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              IK   +S   VG  L+DMYAK G + +A  +FH +PE++++A   +ISG+ Q G D 
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  LF  +  EG+  +  T ++VL +++   A+   KQVH+  +++   S   ++NSLI
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDS 399
           D Y KCG+V  A +IF        ++  +M+  Y++ G+  E L+L+ L  ++ ++ PDS
Sbjct: 307 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 366

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
               ++L+ C++    + G ++  +++  K G   D      +V++  + G +++A    
Sbjct: 367 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 426

Query: 458 SEIPDRGIVS-WSAMIGGLAQH 478
            ++P     + W +++G    H
Sbjct: 427 KKMPFVPTAAIWGSLLGSCRVH 448


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 272/724 (37%), Positives = 416/724 (57%), Gaps = 20/724 (2%)

Query: 1   VLKA---CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           VL+A   CT  K L  G  +H  ++ TG  S   +ANSL+ +YAKC +F  +  +FD+I 
Sbjct: 13  VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSIN 72

Query: 58  ERSVVSWNSLFSCY----VHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGD 111
            + VVSWN L + +     H   L   +  F+++V++   I PN  +L+ +  A +   D
Sbjct: 73  NKDVVSWNCLINAFSQQQAHAPSLH-VMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSD 131

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           S  GR+ H  ++K     D+F+A++L++MY K G + +A  +F ++   + VSW  +I+G
Sbjct: 132 SRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISG 191

Query: 172 CVLHEHNDWALKLFQQMKSSEI--NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
               E  D A +LF+ M+  E   N N F +TS L A     L   GRQ+H   +K  + 
Sbjct: 192 YASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLV 251

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
               V   LV MY KCGS+++A   F L   KN I W+ +++G  Q G   +A  LF  M
Sbjct: 252 CIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM 311

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
           ++ G    + TL  V+ + +   AI   +Q+H  S+K  +E   Y++++L+D Y KCG +
Sbjct: 312 HQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSI 371

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            DA K F+     D+V  TS+IT Y Q G  E AL LY +MQ   + P+    +S+L AC
Sbjct: 372 VDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKAC 431

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           +NL+A +QGKQ+H  IIK+ F  +   G++L  MYAKCGS+DD  R F  +P R ++SW+
Sbjct: 432 SNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWN 491

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMI GL+Q+GRG E L++F +M  +G  P+++T V++L AC+H GLV     +F+ M  +
Sbjct: 492 AMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDE 551

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           F I P  EHYACM+DIL RAGK  EA E +++        +W  LL A++ +++ ++G +
Sbjct: 552 FNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAY 611

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           A E L  +   +SS +VLLS+IY + G W++V +VR  MK   + KEPG SWIE+K   +
Sbjct: 612 AGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTH 671

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET--------DLHDVEESEKEQLLY 701
            F VGD  H +  EI   L  ++ L+   GY P++++        DL D E+S + QL +
Sbjct: 672 VFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLPPETISDDLKDQEDSHEIQLRF 731

Query: 702 HHSE 705
            + E
Sbjct: 732 IYGE 735


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/690 (35%), Positives = 399/690 (57%), Gaps = 21/690 (3%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +++ C  +G     R +HG+ +K G  +DMF A +LV++Y +  +  DA  +F  +   +
Sbjct: 82  LLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKN 141

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +V+W A+I G  L+     AL++F +M      P+ +T    L AC+     +LG+Q+H 
Sbjct: 142 VVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHG 201

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
             IK    +   +G  L  +Y K G ++     F   P+KN+I W  +IS   ++   ++
Sbjct: 202 YSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLD 261

Query: 282 AA-SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
              SLF  M   GV  ++ TL++V+    +   + + KQV A   K   E++  + NS +
Sbjct: 262 LGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTM 321

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLE 389
             Y + G  ++A+++F+E  +  ++   +MI+ YAQ              G +ALKL+ +
Sbjct: 322 YLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRD 381

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +   E+ PD F  SS+L+ C+ + A EQG+Q+H + IK G +SD    ++LVNMY KCGS
Sbjct: 382 LVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGS 441

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           I+ A +AF E+P R  V+W++MI G +QHGR ++A+Q+F  M+  G  PN IT VS+L A
Sbjct: 442 IECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSA 501

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C++AGLV EA+ +F+ M  ++ I+P+ +HY CM+D+  R G+  +A   +    F+ N +
Sbjct: 502 CSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEA 561

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W +L+   R + N+E+  +AA+ L  ++P+   T+VLL N+Y S G W +VA+VR+  K
Sbjct: 562 IWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAK 621

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD-- 687
              +      SWI ++DKVY F   D +H ++ E+Y  L+ + +     GY P       
Sbjct: 622 HEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNAPEL 681

Query: 688 LHDVEESEKEQ-------LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           L D +E + ++       L+ HHSE+LAVA GL+ TPPGAT+RV KN+ +C DCH+S ++
Sbjct: 682 LFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSSIKY 741

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
            S + +REI+VRD  R H F++G CSCG +
Sbjct: 742 FSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 257/516 (49%), Gaps = 32/516 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C     L     +HG +V TG  +D FVA SLV +Y +C +  D+RRLFD +P+++
Sbjct: 82  LLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKN 141

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L + +        A+  F EM+  G  P+ ++L  M++AC+ +    LG+++HG
Sbjct: 142 VVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHG 201

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-D 179
           YSIK G D+     N+L  +Y K G+LE  +  FK     ++++W  +I+ C   E+  D
Sbjct: 202 YSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLD 261

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L LF  M    + PN FT TS +  C       LG+Q+     K+  +++  V    +
Sbjct: 262 LGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTM 321

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPW 288
            +Y + G  DEA  +F  M   ++I WN +ISG+ Q                +A  LF  
Sbjct: 322 YLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRD 381

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           + R  +  D  T S++L   ++  A+   +Q+HA ++KT   SD  + ++L++ Y KCG 
Sbjct: 382 LVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGS 441

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +E A K F E      V  TSMI+ Y+Q G  ++A++L+ +M      P+     SLL+A
Sbjct: 442 IECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSA 501

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL-------VNMYAKCGSIDDADRAFSEIP 461
           C+     E+ ++       F  M + +    L       V+M+ + G +DD   AFS I 
Sbjct: 502 CSYAGLVEEAERY------FDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDD---AFSFIK 552

Query: 462 DRGIVS----WSAMIGGLAQHGRGKEALQMFGQMLE 493
             G       WS+++ G   HG  + A     ++LE
Sbjct: 553 RTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLE 588



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 4/304 (1%)

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M R+G          +L        +G  + +H   VKT   +D ++  SL++ Y +C  
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
             DA ++F      ++V  T++IT +        AL++++EM +    P  +    +L+A
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C+     + G+QVH + IK+G  + T  GNSL  +Y K G ++   RAF   PD+ +++W
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 246

Query: 469 SAMIGGLAQHGRGKE-ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           + MI   A+     +  L +F  MLE GV+PN  TL SV+  C  A L        ++  
Sbjct: 247 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCG-ARLDMSLGKQVQAFC 305

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEV 586
            K G +         + +  R G+  EAM L + M   ++   W A++ G A+I  + + 
Sbjct: 306 YKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD-SSSIITWNAMISGYAQIMDSAKD 364

Query: 587 GQHA 590
             HA
Sbjct: 365 DLHA 368


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/744 (35%), Positives = 408/744 (54%), Gaps = 32/744 (4%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           S+ + N+L   Y      +EA+  +  M++  GI P+ F+   +++AC+       G ++
Sbjct: 85  SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  +K+G   D+F AN+L+  YA  G ++    VF ++   ++VSW ++I G  +    
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+ LF +M    + PN  T   A+ ACA ++  ELG+++   + ++ +KS+ +V   L
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY KCG M   R IF    +KNL+ +N ++S ++Q+G   E   +   M ++G   D+
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG----------- 347
            T+ + + + A    + V K  HA   +   E  D I N++ID Y KCG           
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDS 384

Query: 348 --------------------HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
                                +E A++IF E    +LV+  +MI A  Q  + EEA+ L 
Sbjct: 385 MSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLL 444

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            EMQ++ I  D      + +AC  L A +  K ++ +I K     D   G +LV+M+++C
Sbjct: 445 REMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRC 504

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G   +A R F  +  R + +W+A I   A  G  K A+++F +ML+  V  +    V++L
Sbjct: 505 GDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALL 564

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            A +H G V + +  F +MEK  G+ P   HY CM+D+LGRAG  +EA +L+ +MP + N
Sbjct: 565 TAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPN 624

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
             +WG+ L A R +KNVE   +A E +  + PEK   HVLLSNIYASAG W++VA+VR  
Sbjct: 625 DVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQ 684

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           MK+   +K  G S IEV   +  FT GD SH  + +I   L E++  +++ GYVP     
Sbjct: 685 MKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNV 744

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           L DV+E EKE LL  HSEKLA+A+GLI T  G  IRV KNLR+C DCH+  + +SK+  R
Sbjct: 745 LVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGR 804

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EI VRD NR+H F+ G CSC  +W
Sbjct: 805 EITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 245/511 (47%), Gaps = 33/511 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC+       G+QVHG+VV  G   D FVANSL+  YA CG     R++FD + ER+
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERN 187

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW SL + Y   +  +EAVC F EMV  G+ PN  ++   I+ACA   D  LG+K+  
Sbjct: 188 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCN 247

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              +LG  S+    NAL+DMY K G++     +F +    ++V +N +++  V H     
Sbjct: 248 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 307

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L +  +M      P+  T  S + ACA +    +G+  H  + +  ++    +   ++D
Sbjct: 308 VLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIID 367

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG---------GDMEAASLFPW--- 288
           MY KCG  + A  +F  M  K ++ WN +I+G +++G         G+M  ++L  W   
Sbjct: 368 MYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTM 427

Query: 289 -------------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
                              M  +G+  D+ T+  +  +     A+ + K ++    K   
Sbjct: 428 IGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDI 487

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D  +  +L+D + +CG   +A+++F+     D+ A T+ I   A  G  + A++L+ E
Sbjct: 488 HIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDE 547

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAGNSLVNMYAKCG 448
           M  +++  D FV  +LL A ++    +QG+Q+   + K  G          +V++  + G
Sbjct: 548 MLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAG 607

Query: 449 SIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
            +++A      +P +   V W + +    +H
Sbjct: 608 LLEEAFDLMKSMPIKPNDVIWGSFLAACRKH 638



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 10/199 (5%)

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED---AVKIFKESSAV--DLVACTSMIT 372
           KQ+H   +K       + +N LI A  + G  E    A+  FKE       L  C ++I 
Sbjct: 39  KQLHCNMLKKGV----FNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIR 94

Query: 373 AYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            YA  GL +EA+ +YL M     I PD+F    LL+AC+ + A+ +G QVH  ++K G +
Sbjct: 95  GYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLV 154

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D F  NSL++ YA CG +D   + F E+ +R +VSW+++I G +     KEA+ +F +M
Sbjct: 155 KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM 214

Query: 492 LEDGVLPNHITLVSVLCAC 510
           +E GV PN +T+V  + AC
Sbjct: 215 VEVGVEPNPVTMVCAISAC 233


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/566 (42%), Positives = 353/566 (62%), Gaps = 5/566 (0%)

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL- 238
           +AL L Q+     + P+   Y+  LK C  +   E GR +H  L+      + +V   + 
Sbjct: 73  YALDLIQR---GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNII 129

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V+MYAKCG +D+AR +F  MP K+++ W  +I+G  QN    +A  LFP M R G+  + 
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNH 189

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TLS++LK+  S   +    Q+HA  +K  ++S  Y+ ++L+D Y +CGH++ A   F  
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                 V+  ++I+ +A+ G GE AL L  +MQ +   P  F  SS+ +ACA++ A EQG
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG 309

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K VH H+IK G     F GN+L++MYAK GSIDDA R F  +    +VSW+ M+ G AQH
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GKE L  F QML  G+ PN I+ + VL AC+H+GL+ E  ++FE M KK+ ++P   H
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPH 428

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y   +D+LGR G    A   +  MP +  A+VWGALLGA R++KN+E+G +AAE  F ++
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S   +LLSNIYASAG W +VAKVR+ MK++ +KK+P  SW+E+++ V+ F   D +H
Sbjct: 489 PHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETH 548

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            + KEI  K +E+S  + + GYVP     L  V++ E+E+ L +HSEKLA+AF L+ TP 
Sbjct: 549 PQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPT 608

Query: 719 GATIRVKKNLRICVDCHTSFEFISKI 744
           G+ IR+KKN+R+C DCH + +F+SKI
Sbjct: 609 GSPIRIKKNIRVCGDCHAAIKFVSKI 634



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 201/389 (51%), Gaps = 6/389 (1%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVA 152
           P+    S ++  C   G    GR +H + +   + D+ +   N +V+MYAK G L+DA  
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F ++   D+V+W A+IAG   +     AL LF QM    + PN FT +S LKA      
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            + G QLH   +K   +S   VG  LVDMYA+CG MD A++ F  MP K+ ++WN +ISG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           H + G    A  L   M R+       T S+V  + AS  A+   K VHA  +K+  +  
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            +I N+L+D Y K G ++DA ++F      D+V+  +M+T  AQ GLG+E L  + +M  
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 393 REINPD--SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
             I P+  SF+C  +L AC++    ++G      + K+    D     + V++  + G +
Sbjct: 385 IGIEPNEISFLC--VLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442

Query: 451 DDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           D A+R   E+P     + W A++G    H
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 191/359 (53%), Gaps = 1/359 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVV-MYAKCGNFIDSRRLFDAIPER 59
           +LK CT    +  G  VH  +V + F  +  V  +++V MYAKCG   D+RR+FD +P +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            +V+W +L + +   +   +A+  F +M+  G++PN F+LSS++ A         G ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + +K GY S ++  +ALVDMYA+ G+++ A   F  +     VSWNA+I+G       +
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL L  +M+     P  FTY+S   ACA +   E G+ +H  +IK  +K    +G  L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK GS+D+A+ +F  + + ++++WN +++G  Q+G   E    F  M R G+  ++ 
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           +   VL + +    +        L  K   E D     + +D  G+ G ++ A +  +E
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE 451



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  S+  L  G Q+H   +  G+ S  +V ++LV MYA+CG+   ++  FD +P +S
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L S +      E A+    +M     +P  F+ SS+ +ACA  G    G+ +H 
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHA 314

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     F  N L+DMYAK G+++DA  VF  +  PD+VSWN ++ GC  H     
Sbjct: 315 HMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKE 374

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L  F+QM    I PN  ++   L AC+   L + G      + K +++ D    V  VD
Sbjct: 375 TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVD 434

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           +  + G +D A      MP E     W  ++
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALL 465


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/655 (39%), Positives = 396/655 (60%), Gaps = 14/655 (2%)

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           +D ++FS N L+  YAK   +E A  +F ++  PD VS+N +IA          A +LF 
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M+ + ++ + FT +  + AC G+ +  L RQLH   +   + S   VG  L+  Y+K G
Sbjct: 130 EMREAFLDMDGFTLSGIITAC-GINVG-LIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 247 SMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
            + EAR IFH + E ++ ++WN ++  ++Q+    +A  L+  M   G+  D  TL++VL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVDL 364
            +  + Q +    Q HA  +K+ +  + ++ + LID Y KCG  + D  K+F E S  DL
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 365 VACTSMITAYAQF-GLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQV 421
           V   +MI+ Y+ +  L +EAL+ + ++Q     PD  S VC  +++AC+N+S+  QG+QV
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVC--VISACSNMSSPSQGRQV 365

Query: 422 HVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           H   +K    S+  +  N+L+ MY+KCG++ DA   F  +P+   VS+++MI G AQHG 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G ++L +F +MLE    P +IT +SVL AC H G V + K +F  M++KFGI+P   H++
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGRAGK  EA  L++T+PF      W ALLGA RI+ NVE+   AA  L  ++P 
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPL 545

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            ++ +V+L+NIY+  G   + A VR+ M+D  +KK+PG SWIEV  +++ F   D  H  
Sbjct: 546 NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL----HDVEESEKEQLLYHHSEKLAVAFGLIAT 716
            K+I   L+E+   + K GY P V +        V + E+E  L HHSEKLAV+FGL++T
Sbjct: 606 IKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMST 665

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G  I V KNLRICVDCH + ++IS++V REI VRD +RFH F++G CSCGGYW
Sbjct: 666 REGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 267/534 (50%), Gaps = 49/534 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK C + +DL  G  +H + + +   +  +++N  +++Y+KC     +RR+FD   + +V
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-------- 113
            S+N+L S Y    ++E A   F EM     +P+  S +++I A A  GD+         
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 114 -------------------------LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                                    L R++H  S+  G DS +   NAL+  Y+K G L+
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 149 DAVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           +A  +F  + E  D VSWN+++   + H     AL+L+ +M    +  ++FT  S L A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS-MDEARMIFHLMPEKNLIAW 266
             ++    G Q H  LIK     +  VG GL+D+Y+KCG  M + R +F  +   +L+ W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 267 NIVISGH-LQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVHAL 323
           N +ISG+ L      EA   F  +  +GVG   D  +L  V+ + ++  +    +QVH L
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQL--QGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGL 368

Query: 324 SVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           ++K    S+   V N+LI  Y KCG++ DA  +F      + V+  SMI  YAQ G+G +
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SL 440
           +L L+  M + +  P +    S+L ACA+    E GK ++ +++K  F  +  AG+   +
Sbjct: 429 SLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCM 487

Query: 441 VNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +++  + G + +A+R    IP D G   WSA++G    HG  + A++   ++L+
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 207/438 (47%), Gaps = 41/438 (9%)

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF- 255
           + ++   LK C        G+ LH   IK  + +   +    + +Y+KC  +  AR +F 
Sbjct: 8   LHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67

Query: 256 HL------------------------------MPEKNLIAWNIVISGHLQNGGDMEAASL 285
           H                               MP+ + +++N +I+ + + G    A  L
Sbjct: 68  HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M    +  D  TLS ++ +      +G+ +Q+HALSV T  +S   + N+LI +Y K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 346 CGHVEDAVKIFK-ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
            G +++A +IF   S   D V+  SM+ AY Q   G +AL+LYLEM  R +  D F  +S
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS-IDDADRAFSEIPDR 463
           +L A  N+     G Q H  +IK G+  ++  G+ L+++Y+KCG  + D  + F EI + 
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 464 GIVSWSAMIGGLAQH-GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH- 521
            +V W+ MI G + +     EAL+ F Q+   G  P+  +LV V+ AC++    ++ +  
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI- 580
           H  +++       +  + A +I +  + G  ++A  L DTMP     S    + G A+  
Sbjct: 366 HGLALKLDIPSNRISVNNA-LIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424

Query: 581 --YKNVEVGQHAAEMLFA 596
             ++++ + Q   EM F 
Sbjct: 425 MGFQSLHLFQRMLEMDFT 442



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 161/289 (55%), Gaps = 8/289 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN-FIDSRRLFDAIPER 59
           VL A T+ +DL  GLQ H  ++ +G+  +  V + L+ +Y+KCG   +D R++FD I   
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 60  SVVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +V WN++ S Y ++ D  +EA+  F+++   G RP++ SL  +I+AC+       GR++
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 119 HGYSIKLGYDSDMFSA-NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           HG ++KL   S+  S  NAL+ MY+K GNL DA  +F  +   + VS+N++IAG   H  
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG-- 235
              +L LFQ+M   +  P   T+ S L ACA     E G+ ++ +++K +   +P  G  
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHF 484

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAA 283
             ++D+  + G + EA  +   +P +     W+ ++ G  +  G++E A
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALL-GACRIHGNVELA 532



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 3/186 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V+ AC++      G QVHG+ +     S+   V N+L+ MY+KCGN  D++ LFD +PE 
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEH 408

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR-KI 118
           + VS+NS+ + Y       +++  F+ M+     P   +  S++ ACA +G    G+   
Sbjct: 409 NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYF 468

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           +    K G + +    + ++D+  + G L +A  + + I   P    W+A++  C +H +
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGN 528

Query: 178 NDWALK 183
            + A+K
Sbjct: 529 VELAIK 534


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/609 (39%), Positives = 358/609 (58%), Gaps = 18/609 (2%)

Query: 181 ALKLFQQMKSSE----INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           A+ LF +M++S+     +  + +   ALK+CA + L+ LG  LH   ++    +D     
Sbjct: 38  AIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAAN 97

Query: 237 GLVDMYAKCGS--------------MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
            L+++Y K  +              ++  R +F  MPEK++++WN ++ G  ++G   EA
Sbjct: 98  ALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEA 157

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             L   M+R+G   D  TLS+VL   A    +    ++H  + +  F  D ++ +SLID 
Sbjct: 158 LGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDM 217

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y  C   + +VK+F      D +   SM+   AQ G  +EAL L+  M    I P     
Sbjct: 218 YANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTF 277

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           SSL+ AC NL++   GKQ+H ++I+ GF  + F  +SL++MY KCG++  A R F  I  
Sbjct: 278 SSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS 337

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
             IVSW+AMI G A HG  +EAL +F +M    + PNHIT ++VL AC+HAGLV +   +
Sbjct: 338 PDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKY 397

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           F SM   +GI P  EH+A + D LGR GK +EA   +  M  +  ASVW  LL A +++K
Sbjct: 398 FNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHK 457

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N  + +  A+ +F +EP    +H++LSN Y+S+G W+  A +R+ M+   ++KEP  SWI
Sbjct: 458 NTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWI 517

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           EVK+K + F   D+SH   + I   L+  S+ + + GYVP  +    D+EE +K  +L  
Sbjct: 518 EVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCG 577

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+ FG+I+TPPG TIRV KNLR+CVDCHT  +FISKIV REI++RD NRFHHF++
Sbjct: 578 HSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKD 637

Query: 763 GSCSCGGYW 771
           G CSCG +W
Sbjct: 638 GICSCGDFW 646



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 225/463 (48%), Gaps = 27/463 (5%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN----------- 146
           SL   + +CA  G   LG  +H  +++ G  +D F+ANAL+++Y K+             
Sbjct: 60  SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119

Query: 147 ---LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
              LE    VF ++   D+VSWN ++ GC     +  AL L ++M      P+ FT +S 
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV 179

Query: 204 LKACA-GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           L   A G +++  G +LH    +     D  VG  L+DMYA C   D +  +F  +P ++
Sbjct: 180 LPIFAEGADVRR-GMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            I WN +++G  QNG   EA  LF  M   G+     T S+++ +  +  ++ + KQ+HA
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             ++  F+ + +I +SLID Y KCG+V  A +IF    + D+V+ T+MI  +A  G   E
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLV 441
           AL L+  M+   + P+     ++L AC++    ++G K  +     +G +       +L 
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALA 418

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQM--LEDGVLP 498
           +   + G +++A    S +  +   S WS ++     H     A ++  ++  LE   + 
Sbjct: 419 DTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMG 478

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           +HI L +   +   +G   EA H  +SM KK     MQ+  AC
Sbjct: 479 SHIILSNTYSS---SGRWNEAAHLRKSMRKK----GMQKEPAC 514



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 201/422 (47%), Gaps = 47/422 (11%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-----------GNFI--- 47
           LK+C +     LG  +H + + +G  +D F AN+L+ +Y K            G+ +   
Sbjct: 65  LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124

Query: 48  DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
             R++FD +PE+ VVSWN+L           EA+   +EM   G +P+ F+LSS++   A
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
              D   G ++HG++ + G+  D+F  ++L+DMYA     + +V VF ++   D + WN+
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           ++AGC  +   D AL LF++M  S I P   T++S + AC  +    LG+QLH  +I+  
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
              +  +   L+DMY KCG++  AR IF  +   ++++W  +I GH  +G   EA  LF 
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFD 364

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M    +  +  T   VL + +           HA  V   ++      NS+ D YG   
Sbjct: 365 RMELGNLKPNHITFLAVLTACS-----------HAGLVDKGWK----YFNSMSDHYGIVP 409

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            +E                  ++     + G  EEA      M+   I P + V S+LL 
Sbjct: 410 SLEHH---------------AALADTLGRPGKLEEAYNFISGMK---IKPTASVWSTLLR 451

Query: 408 AC 409
           AC
Sbjct: 452 AC 453



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 123/216 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL       D+  G+++HG     GF  D FV +SL+ MYA C     S ++FD +P R 
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WNS+ +       ++EA+  F+ M+ SGI+P   + SS+I AC      LLG+++H 
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y I+ G+D ++F +++L+DMY K GN+  A  +F  I+ PDIVSW A+I G  LH     
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
           AL LF +M+   + PN  T+ + L AC+   L + G
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKG 394


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/687 (36%), Positives = 401/687 (58%), Gaps = 9/687 (1%)

Query: 94  PNEF-SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           PN+  +L S++  C   G S  G ++H Y +K G   ++ ++N L+DMY K      A  
Sbjct: 3   PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           VF  +   ++VSW+A+++G VL+     +L LF +M    I PN FT+++ LKAC  +  
Sbjct: 63  VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            E G Q+H   +K+  +    VG  LVDMY+KCG ++EA  +F  + +++LI+WN +I+G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182

Query: 273 HLQNGGDMEAASLFPWMYREGVG--FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
            +  G   +A   F  M    +    D+ TL+++LK+ +S   I   KQ+H   V++ F 
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242

Query: 331 --SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S   I  SL+D Y KCG++  A K F +     +++ +S+I  YAQ G   EA+ L+ 
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            +Q+     DSF  SS++   A+ +   QGKQ+    +K     +T   NS+V+MY KCG
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +D+A++ F+E+  + ++SW+ +I G  +HG GK+++++F +ML   + P+ +  ++VL 
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H+G++ E +  F  + +  GI+P  EHYAC++D+LGRAG+ +EA  L+DTMP + N 
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            +W  LL   R++ ++E+G+   ++L  I+ +  + +V++SN+Y  AG W+     R   
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA-GYVPMVETD 687
               LKKE GMSW+E++ +V+ F  G+ SH  +  I   L E    L +  GYV  ++ +
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHE 602

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIA---TPPGATIRVKKNLRICVDCHTSFEFISKI 744
           LHD+++  KE+ L  HSEKLA+   L        G TIRV KNLR+CVDCH   + +SKI
Sbjct: 603 LHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKI 662

Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
                +VRD  RFH F +G CSCG YW
Sbjct: 663 TKIAYVVRDAVRFHSFEDGCCSCGDYW 689



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 264/485 (54%), Gaps = 6/485 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CT K     G QVH  ++ +G   +   +N L+ MY KC   + + ++FD++PER+
Sbjct: 12  ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW++L S +V    L+ ++  F EM   GI PNEF+ S+ + AC        G +IHG
Sbjct: 72  VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K+G++  +   N+LVDMY+K G + +A  VF+ I    ++SWNA+IAG V   +   
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191

Query: 181 ALKLFQQMKSSEI--NPNMFTYTSALKACAGMELKELGRQLHCSLIK--MEIKSDPIVGV 236
           AL  F  M+ + I   P+ FT TS LKAC+   +   G+Q+H  L++      S   +  
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVD+Y KCG +  AR  F  + EK +I+W+ +I G+ Q G  +EA  LF  +       
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D   LS+++   A F  +   KQ+ AL+VK     +  ++NS++D Y KCG V++A K F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E    D+++ T +IT Y + GLG+++++++ EM    I PD     ++L+AC++    +
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431

Query: 417 QGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGG 474
           +G+++   +++  G          +V++  + G + +A      +P +  V  W  ++  
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491

Query: 475 LAQHG 479
              HG
Sbjct: 492 CRVHG 496


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 274/755 (36%), Positives = 432/755 (57%), Gaps = 12/755 (1%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            ++HG  V  GF  D    NSL+ MY   G   D+ ++F  +  +  +SW ++ S Y    
Sbjct: 319  EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 76   FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            F ++A+  +  M L  + P++ +++S + ACA  G   +G K+H  +   G+   +  AN
Sbjct: 379  FPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 136  ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG-CVLHEHNDWALKLFQQMKSSEIN 194
            AL++MYAK  +++ A+ VFK +   D+VSW+++IAG C  H   D AL  F+ M    + 
Sbjct: 439  ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFD-ALYYFRYMLG-HVK 496

Query: 195  PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
            PN  T+ +AL ACA       G+++H  +++  I S+  V   L+D+Y KCG    A   
Sbjct: 497  PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQ 556

Query: 255  FHLMPEKNLIAWNIVISGHLQNG-GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            F +  EK++++WNI++SG + +G GD+ A SLF  M    +G      +    +      
Sbjct: 557  FSVHSEKDVVSWNIMLSGFVAHGLGDI-ALSLFNQMMYTSLGRMGACSALAACACLGRLD 615

Query: 314  IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
            +G+  ++H L+    F     + N+L++ Y K  H++ A+++FK  +  D+V+ +SMI  
Sbjct: 616  VGI--KLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 673

Query: 374  YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
            +       +AL  Y       + P+S    + L+ACA   A   GK++H ++++ G  S+
Sbjct: 674  FCFNHRSFDAL-YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE 732

Query: 434  TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             +  N+L+++Y KCG    A   FS   ++ +VSW+ M+ G   HG G  AL +F QM+E
Sbjct: 733  GYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 792

Query: 494  DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
             G  P+ +T V ++CAC+ AG+V +    F    +KF I P  +HYACM+D+L R GK  
Sbjct: 793  MGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLT 851

Query: 554  EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
            EA  L++ MP + +A+VWGALL   RI+++VE+G+ AA+++  +EP   + HVLL ++Y 
Sbjct: 852  EAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYT 911

Query: 614  SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
             AG W  VA+VR+ M++  L+++ G SW+EVK   + F   D SH + KEI   L  + +
Sbjct: 912  DAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYE 971

Query: 674  LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
             +   G+ P VE+ L D E SE + +L  HSE+LAVAFGLI T PG TI V KN   C  
Sbjct: 972  RMKACGFAP-VES-LEDKEVSE-DDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQS 1028

Query: 734  CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
            CH  F+ IS+IV REI VRD  + H F++G CSCG
Sbjct: 1029 CHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCG 1063



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 247/463 (53%), Gaps = 5/463 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+++ M  + G    + R+F  +PER V SWN +   Y    FLEEA+  +  M+ +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RP+ ++   ++  C G  D  +GR++H + ++ G+  ++   NALV MYAK G++  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D +SWNA+IAG   +   +  L+LF  M  +E+ PN+ T TS   A +GM 
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA-SGM- 310

Query: 212 LKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           L E+G  +++H   +K     D      L+ MY   G M +A  IF  M  K+ ++W  +
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG+ +NG   +A  ++  M    V  D  T+++ L + A    + V  ++H L+    F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                + N+L++ Y K  H++ A+++FK  +  D+V+ +SMI  +       +AL  Y  
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDAL-YYFR 489

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
                + P+S    + L+ACA   A   GK++H ++++ G  S+ +  N+L+++Y KCG 
Sbjct: 490 YMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
              A   FS   ++ +VSW+ M+ G   HG G  AL +F QM+
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 268/520 (51%), Gaps = 4/520 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C    D  +G +VH  V+  GF  +  V N+LV MYAKCG+ + +R++FD +    
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTD 262

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ + +      E  +  F  M+ + ++PN  +++S+  A     +    +++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K G+  D+   N+L+ MY  +G + DA  +F  +E  D +SW A+I+G   +   D 
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+++  M+   +NP+  T  SAL ACA +   ++G +LH            +V   L++
Sbjct: 383 ALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +D+A  +F  M EK++++W+ +I+G   N    +A   F +M    V  +  T
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVT 501

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  A+   K++HA  ++    S+ Y+ N+L+D Y KCG    A   F   S
Sbjct: 502 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS 561

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+   M++ +   GLG+ AL L+ +M    +        S L ACA L   + G +
Sbjct: 562 EKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLG--RMGACSALAACACLGRLDVGIK 619

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H      GF+      N+L+ MYAK   ID A   F  + ++ +VSWS+MI G   + R
Sbjct: 620 LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR 679

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             +AL  F  ML   V PN +T ++ L AC   G +   K
Sbjct: 680 SFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGK 718



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 7/239 (2%)

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N+++    + G +  A ++F +    D+ +   M+  Y + G  EEAL LY  M    + 
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD +    +L  C  +  +  G++VH H+++FGF  +    N+LV MYAKCG I  A + 
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +     +SW+AMI G  ++   +  L++F  MLE+ V PN +T+ SV  A      V
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 517 AEAKH-HFESMEKKFGI-----QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
             AK  H  ++++ F I       + + Y  +   +G AGK    ME  D M + A  S
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL-GRMGDAGKIFSRMETKDAMSWTAMIS 372



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 6/197 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC +   L  G ++H  V+  G  S+ +V N+L+ +Y KCG    +   F    E+ V
Sbjct: 705 LSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDV 764

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HG 120
           VSWN + S +V     + A+  F +MV  G  P+E +   M  AC+ +G  + G ++ H 
Sbjct: 765 VSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVLMC-ACSRAGMVIQGWELFHR 823

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH-- 177
            + K     ++     +VD+ ++VG L +A  +   +   PD   W A++ GC +H H  
Sbjct: 824 RTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVE 883

Query: 178 -NDWALKLFQQMKSSEI 193
             + A K+  +++ +++
Sbjct: 884 LGELAAKVILELEPNDV 900


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 273/766 (35%), Positives = 407/766 (53%), Gaps = 115/766 (15%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD------------ 161
           L R +HG  I  G+       N L+D+Y K   L  A  +F +I  PD            
Sbjct: 32  LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91

Query: 162 ---------------------IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                                 V +NA+I G   +     A+ LF +MK     P+ FT+
Sbjct: 92  ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151

Query: 201 TSALKACAGMEL----KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS----MDEAR 252
            S L   AG+ L    ++   Q H + +K        V   LV +Y+KC S    +  AR
Sbjct: 152 ASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208

Query: 253 MIFHLMPEKN--------------------------------LIAWNIVISGHLQNGGDM 280
            +F  + EK+                                L+A+N +ISG++  G   
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT---AFESDDYIVN 337
           EA  +   M   G+  D+ T  +V+++ A+   + + KQVHA  ++    +F  D    N
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----N 324

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY----------------------- 374
           SL+  Y KCG  ++A  IF++  A DLV+  ++++ Y                       
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384

Query: 375 --------AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
                   A+ G GEE LKL+  M+     P  +  S  + +CA L AY  G+Q H  ++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K GF S   AGN+L+ MYAKCG +++A + F  +P    VSW+A+I  L QHG G EA+ 
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           ++ +ML+ G+ P+ ITL++VL AC+HAGLV + + +F+SME  + I P  +HYA +ID+L
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
            R+GKF +A  +++++PF+  A +W ALL   R++ N+E+G  AA+ LF + PE   T++
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           LLSN++A+ G W+ VA+VR+ M+D  +KKE   SWIE++ +V+TF V D SH  ++ +Y 
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVE-ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
            L ++   + + GYVP     LHDVE +  KE +L  HSEK+AVAFGL+  PPG TIR+ 
Sbjct: 685 YLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIF 744

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KNLR C DCH  F F+S +V R+II+RD  RFHHFRNG CSCG +W
Sbjct: 745 KNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 175/362 (48%), Gaps = 68/362 (18%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGN----FIDSRRLFDAIPERSVVSW------ 64
           +Q H   + +G      V+N+LV +Y+KC +       +R++FD I E+   SW      
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228

Query: 65  --------------------------NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
                                     N++ S YV+  F +EA+   + MV SGI  +EF+
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
             S+I ACA +G   LG+++H Y ++    S  F  N+LV +Y K G  ++A A+F+ + 
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD-NSLVSLYYKCGKFDEARAIFEKMP 347

Query: 159 HPDIVSWNAVIAGCV--------------LHEHN--DW---------------ALKLFQQ 187
             D+VSWNA+++G V              + E N   W                LKLF  
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           MK     P  + ++ A+K+CA +     G+Q H  L+K+   S    G  L+ MYAKCG 
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           ++EAR +F  MP  + ++WN +I+   Q+G   EA  ++  M ++G+  D+ TL TVL +
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527

Query: 308 VA 309
            +
Sbjct: 528 CS 529



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 154/314 (49%), Gaps = 35/314 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC +   L LG QVH  V+     S  F  NSLV +Y KCG F ++R +F+ +P + 
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKD 350

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----VLS-------------------------- 90
           +VSWN+L S YV    + EA   FKEM    +LS                          
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 91  -GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  P +++ S  I +CA  G    G++ H   +K+G+DS + + NAL+ MYAK G +E+
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF+ +   D VSWNA+IA    H H   A+ ++++M    I P+  T  + L AC+ 
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530

Query: 210 MELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA-WN 267
             L + GR+   S+  +  I         L+D+  + G   +A  +   +P K     W 
Sbjct: 531 AGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590

Query: 268 IVISGHLQNGGDME 281
            ++SG  +  G+ME
Sbjct: 591 ALLSG-CRVHGNME 603



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 22/246 (8%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K+C        G Q H  ++  GFDS     N+L+ MYAKCG   ++R++F  +P    
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG- 120
           VSWN+L +         EAV  ++EM+  GIRP+  +L +++ AC+ +G    GRK    
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543

Query: 121 ----YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               Y I  G D        L+D+  + G   DA +V + +   P    W A+++GC +H
Sbjct: 544 METVYRIPPGAD----HYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599

Query: 176 EHNDWAL----KLFQQMKSSE----INPNMFTYTSALKACAG----MELKELGRQLHCSL 223
            + +  +    KLF  +   +    +  NM   T   +  A     M  + + +++ CS 
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659

Query: 224 IKMEIK 229
           I+ME +
Sbjct: 660 IEMETQ 665



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 140/336 (41%), Gaps = 79/336 (23%)

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           ++ + + VH   +   F+   +I+N LID Y K   +  A ++F E S  D +A T+M++
Sbjct: 29  SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88

Query: 373 AYAQFG---------------------------------LGEEALKLYLEMQDREINPDS 399
            Y   G                                  G  A+ L+ +M+     PD+
Sbjct: 89  GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148

Query: 400 FVCSSLLNACANLSAYE-QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS----IDDAD 454
           F  +S+L   A ++  E Q  Q H   +K G    T   N+LV++Y+KC S    +  A 
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHG------------------------------RG--K 482
           + F EI ++   SW+ M+ G  ++G                              RG  +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHY- 539
           EAL+M  +M+  G+  +  T  SV+ AC  AGL+   K  H +    + F       H+ 
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFD 323

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             ++ +  + GKF EA  + + MP +   S W ALL
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALL 358


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/629 (37%), Positives = 378/629 (60%), Gaps = 2/629 (0%)

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G+L  A  +F  +++PD    N +I G    ++   A+ L+  M    +  + +TY   L
Sbjct: 59  GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            ACA +   +LGR+ HC ++K    SD  V   L+  Y  CGS   A  +F     ++++
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            WNI+I+ HL  G   +A  L   M + + +  D+ T+ +++ + A    +   K +H+ 
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSY 238

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S +   + +  + N+++D Y KC  +E A ++F      D+++ TSM++  A+ G  +EA
Sbjct: 239 SKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEA 298

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+ +MQ  +I  D      +L+ACA   A +QGK +H+ I KF    D     +LV+M
Sbjct: 299 LALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDM 358

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCGSID A + F  +  R + +W+A+IGGLA HG G++A+ +F QM  D ++P+ +T 
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           +++LCAC+HAGLV E    F++M+ KF I+P  EHY C++D+L RA K  +A+  ++ MP
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            +AN+ +W  LLGA R   + ++ +     +  +EP+    +V+LSN+YA    WD+  K
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 538

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN-KAGYVP 682
           +R+ MK+  ++K PG SWIE+   ++ F  GDRSH ++++IYA ++E++  +N   G+VP
Sbjct: 539 LRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVP 598

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
                L D+EE EKE  L+ HSEKLA+A GLI+TP G+ IR+ KNLR+C DCH+  +  S
Sbjct: 599 GTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTS 658

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           K+ +REI+ RD +RFHHF+ GSCSC  +W
Sbjct: 659 KVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 213/432 (49%), Gaps = 37/432 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     + LG + H  V+  GF SD FV N+L+  Y  CG+F  +  +FD    R 
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN + + +++    E+A     EM  L  +RP+E ++ S++ ACA  G+   G+ +H
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            YS +LG D ++   NA++DMY K  ++E A  VF  I   D++SW ++++G     +  
Sbjct: 237 SYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQ 296

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL LFQ+M+ ++I  +  T    L ACA     + G+ +H  + K EI  D ++   LV
Sbjct: 297 EALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALV 356

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCGS+D A  +F  M  +N+  WN +I G   +G   +A SLF  M  + +  D  
Sbjct: 357 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 416

Query: 300 TLSTVL----------KSVASFQAIGVCKQVHALS---------VKTAFESDD---YIVN 337
           T   +L          + +A FQA+    Q+             +  A + DD   +I N
Sbjct: 417 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 476

Query: 338 SLIDA--------YGKC---GHVEDAVKIFKESSAVDLVACTSMI---TAYAQFGLGEEA 383
             I A         G C   GH + A KI +    ++  +C   +     YA     + A
Sbjct: 477 MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHA 536

Query: 384 LKLYLEMQDREI 395
           LKL  +M+++ I
Sbjct: 537 LKLRKQMKNKGI 548



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 225/475 (47%), Gaps = 17/475 (3%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q H +++ T    +   ++ L+   A    G+   +R+LF  +        N++   Y  
Sbjct: 29  QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                EAV  +  MV  G+  + ++   ++ ACA  G   LGR+ H   +K G+ SD+F 
Sbjct: 89  SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSE 192
            NAL+  Y   G+   A  VF +    D+V+WN +I   +    ++ A  L  +M K   
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + P+  T  S + ACA +   E G+ LH    ++ +  +  V   ++DMY KC  ++ A+
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQ 268

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F+ + EK++++W  ++SG  ++G   EA +LF  M    +  D+ TL  VL + A   
Sbjct: 269 EVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTG 328

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+   K +H L  K     D  +  +L+D Y KCG ++ A+++F+     ++    ++I 
Sbjct: 329 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIG 388

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
             A  G GE+A+ L+ +M+  ++ PD     +LL AC++    ++G      +  F  M 
Sbjct: 389 GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG------LAMFQAMK 442

Query: 433 DTFAGNS-------LVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHG 479
           + F           +V++  +   +DDA      +P +   V W+ ++G     G
Sbjct: 443 NKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGG 497



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 5/268 (1%)

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLID--AYGKCGHVEDAVKIFKESSAVDLVACTSM 370
           +I   KQ HAL ++T    +    + LI   A    G +  A K+F +    D   C +M
Sbjct: 23  SISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  YA+     EA+ LY  M +R +  D++    +L ACA L A + G++ H  ++K GF
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            SD F  N+L+  Y  CGS   A   F E   R +V+W+ MI      G  ++A  +  +
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202

Query: 491 MLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           M + D + P+ +T+VS++ AC   G +   K    S  K+ G+         ++D+  + 
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGK-FLHSYSKELGLDENLRVNNAILDMYCKC 261

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGA 577
              + A E+ + +  + +   W ++L  
Sbjct: 262 DDIESAQEVFNRIR-EKDVLSWTSMLSG 288


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/650 (40%), Positives = 395/650 (60%), Gaps = 7/650 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           GR++HG+ I  G    M    N LV+MYAK G++ DA  VF  +   D VSWN++I G  
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
            +     A++ +Q M+  EI P  FT  S+L +CA ++  +LG+Q+H   +K+ I  +  
Sbjct: 112 QNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 171

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYRE 292
           V   L+ +YA+ G ++E R IF  MPE + ++WN +I     +   + EA + F    R 
Sbjct: 172 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRA 231

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G   ++ T S+VL +V+S     + KQ+H L++K     +    N+LI  YGKCG ++  
Sbjct: 232 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGC 291

Query: 353 VKIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
            KIF + S   D V   SMI+ Y    L  +AL L   M       DSF+ +++L+A A+
Sbjct: 292 EKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 351

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           ++  E+G +VH   ++    SD   G++LV+MY+KCG +D A R F+ +P R   SW++M
Sbjct: 352 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 411

Query: 472 IGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           I G A+HG+G+EAL++F  M  DG   P+H+T V VL AC+HAGL+ E   HFESM   +
Sbjct: 412 ISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 471

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA--RIYKNVEVGQ 588
           G+ P  EH++CM D+LGRAG+  +  + +D MP + N  +W  +LGA      +  E+G+
Sbjct: 472 GLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGK 531

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
            AAEMLF +EPE +  +VLL N+YA+ G W+++ K R+ MKD  +KKE G SW+ +KD V
Sbjct: 532 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGV 591

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           + F  GD+SH  +  IY KL E++  +  AGYVP     L+D+E+  KE++L +HSEKLA
Sbjct: 592 HMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLA 651

Query: 709 VAFGLIATPPGA-TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
           VAF L A       IR+ KNLR+C DCH++F++ISKI  R+II+RD NR+
Sbjct: 652 VAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/507 (31%), Positives = 262/507 (51%), Gaps = 12/507 (2%)

Query: 14  GLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G +VHG V+ TG  D    + N LV MYAKCG+  D+RR+F  + E+  VSWNS+ +   
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                 EAV  ++ M    I P  F+L S +++CA    + LG++IHG S+KLG D ++ 
Sbjct: 112 QNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 171

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-DWALKLFQQMKSS 191
            +NAL+ +YA+ G L +   +F  +   D VSWN++I      E +   A+  F     +
Sbjct: 172 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRA 231

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
               N  T++S L A + +   ELG+Q+H   +K  I  +      L+  Y KCG MD  
Sbjct: 232 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGC 291

Query: 252 RMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
             IF  M E ++ + WN +ISG++ N    +A  L  +M + G   D    +TVL + AS
Sbjct: 292 EKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 351

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              +    +VHA SV+   ESD  + ++L+D Y KCG ++ A++ F      +  +  SM
Sbjct: 352 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 411

Query: 371 ITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKF 428
           I+ YA+ G GEEALKL+  M+ D +  PD      +L+AC++    E+G K        +
Sbjct: 412 ISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 471

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ-HGR----GK 482
           G        + + ++  + G +D  +    ++P +  ++ W  ++G   + +GR    GK
Sbjct: 472 GLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGK 531

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCA 509
           +A +M  Q+  +  + N++ L ++  A
Sbjct: 532 KAAEMLFQLEPENAV-NYVLLGNMYAA 557



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 230/486 (47%), Gaps = 48/486 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C S K   LG Q+HG  +  G D +  V+N+L+ +YA+ G   + R++F ++PE   
Sbjct: 142 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 201

Query: 62  VSWNSLFSCYVHCDF-LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSWNS+       +  L EAV  F   + +G + N  + SS+++A +      LG++IHG
Sbjct: 202 VSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHND 179
            ++K     +  + NAL+  Y K G ++    +F  + E  D V+WN++I+G + +E   
Sbjct: 262 LALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLA 321

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL L   M  +    + F Y + L A A +   E G ++H   ++  ++SD +VG  LV
Sbjct: 322 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 381

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQ 298
           DMY+KCG +D A   F+ MP +N  +WN +ISG+ ++G   EA  LF  M  +G    D 
Sbjct: 382 DMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDH 441

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL + +           HA  ++  F+       S+ D+YG    +E        
Sbjct: 442 VTFVGVLSACS-----------HAGLLEEGFKH----FESMSDSYGLAPRIEHF------ 480

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC--ANLSAYE 416
           S   DL+            G   E  KL   +    + P+  +  ++L AC  AN    E
Sbjct: 481 SCMADLL------------GRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAE 528

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI-----VSWS 469
            GK+    + +   +    A N ++  NMYA  G  +D  +A  ++ D  +      SW 
Sbjct: 529 LGKKAAEMLFQ---LEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 585

Query: 470 AMIGGL 475
            M  G+
Sbjct: 586 TMKDGV 591


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 280/767 (36%), Positives = 423/767 (55%), Gaps = 78/767 (10%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           SV  WN L    +H +    A+  F+ M      P+ ++   +  AC    +  LG  IH
Sbjct: 90  SVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP---DIVSWNAVIAGCVLHE 176
           G  I+LG++S++F  NA++ MY K   +  A  VF ++ +    D V+WN++++   ++ 
Sbjct: 150 GCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVS---VYS 206

Query: 177 H---NDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           H    + A+ LF++M     I P+     + L  C  + L   GRQ+H   ++  +  D 
Sbjct: 207 HCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDV 266

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  LVDMYAKCG M++A  +F  M  K+++ WN +++G+ QNG   +A SLF  M  E
Sbjct: 267 FVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 326

Query: 293 GV------------GFDQ-----------------------TTLSTVLKSVASFQAIGVC 317
            +            G+ Q                        TL ++L + AS  A+   
Sbjct: 327 KIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHG 386

Query: 318 KQVHALSVKTAF------ESDDY-IVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACT 368
           K+ H  SVK         ++DD  ++N+LID Y KC  +E A  +F E      D+V  T
Sbjct: 387 KETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 446

Query: 369 SMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            MI  YAQ G    AL+L+ EM   D  I P+ F  S +L ACA L+A + GKQ+H +++
Sbjct: 447 VMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVL 506

Query: 427 KFGFM-SDT-FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           +   + SD  F  N L++MY+K G +D A   F  +  R  VSW++++ G   HGR ++A
Sbjct: 507 RRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDA 566

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
            ++F +M ++ ++ + IT + VL AC+H+G+              FG+ P  EHYACM+D
Sbjct: 567 FRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVD 613

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGRAG+  EAM L++ MP +    VW ALL A RI+ N E+ + AA+ L  ++ +   T
Sbjct: 614 LLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGT 673

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           + LLSNIYA+A  W +VA++   MK   +KK PG SW++ +  + TF VGDR+H +S++I
Sbjct: 674 YTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKI 733

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y  L   +DL+ +          LHDV++ EK   L  HSEKLA+A+ ++  PPGA IR+
Sbjct: 734 YETL---ADLIKRIK----ANFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRI 786

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLRIC D H++  +IS IV  EII+RD +RFH F+NGSCSC GYW
Sbjct: 787 TKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 267/546 (48%), Gaps = 65/546 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC    +  LG  +HG V+  GF+S+ FV N+++ MY KC   + +R++FD +  R 
Sbjct: 132 VFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRG 191

Query: 61  V---VSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGR 116
           +   V+WNS+ S Y HC     AV  F+EM +  GI P+   + +++  C   G  L GR
Sbjct: 192 ICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGR 251

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++HG+ ++ G   D+F  NALVDMYAK G +EDA  VF+ +   D+V+WNA++ G   + 
Sbjct: 252 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 311

Query: 177 HNDWALKLFQQMKSSEI-----------------------------------NPNMFTYT 201
             + AL LF +M+  +I                                    PN+ T  
Sbjct: 312 RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLM 371

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKS-------DPIVGVGLVDMYAKCGSMDEARMI 254
           S L ACA +     G++ HC  +K  +K        D  V   L+DMYAKC S++ AR +
Sbjct: 372 SLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAM 431

Query: 255 F-HLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYR--EGVGFDQTTLSTVLKSVAS 310
           F  + P +++++ W ++I G+ Q+G    A  LF  M++    +  +  T+S VL + A 
Sbjct: 432 FDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACAR 491

Query: 311 FQAIGVCKQVHALSVKTAFESDD--YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
             A+   KQ+HA  ++ +    D  ++ N LID Y K G V+ A  +F   S  + V+ T
Sbjct: 492 LAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWT 551

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           S++T Y   G  E+A +++ EM+   +  D      +L AC++              + F
Sbjct: 552 SLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG------------MDF 599

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQM 487
           G          +V++  + G + +A R  +++P +   V W A++     H   + A   
Sbjct: 600 GVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFA 659

Query: 488 FGQMLE 493
             ++LE
Sbjct: 660 AKKLLE 665



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 242/494 (48%), Gaps = 57/494 (11%)

Query: 137 LVDMYAKVGNLEDAVAVF-KDI--EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           L+  Y    ++ +A+ +  K++   H  +  WN +I   +     + AL+LF++MK+   
Sbjct: 63  LIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHW 122

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+ +T+    KAC  +   ELG  +H  +I++  +S+  V   ++ MY KC ++  AR 
Sbjct: 123 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 182

Query: 254 IFHLMPEKNL---IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV-LKSVA 309
           +F  +  + +   + WN ++S +        A SLF  M   G G    T+  V +  V 
Sbjct: 183 VFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREM-TVGYGILPDTVGVVNILPVC 241

Query: 310 SFQAIGVC-KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
            +  +G+C +QVH   V++    D ++ N+L+D Y KCG +EDA K+F+     D+V   
Sbjct: 242 GYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 301

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPD--------------SFVCS----------- 403
           +M+T Y+Q G  E+AL L+ +M++ +I  D               F C            
Sbjct: 302 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 361

Query: 404 ----------SLLNACANLSAYEQGKQVHVHIIKFGF-------MSDTFAGNSLVNMYAK 446
                     SLL+ACA++ A   GK+ H + +KF           D    N+L++MYAK
Sbjct: 362 RCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAK 421

Query: 447 CGSIDDADRAFSEI--PDRGIVSWSAMIGGLAQHGRGKEALQMFGQM--LEDGVLPNHIT 502
           C S++ A   F EI   DR +V+W+ MIGG AQHG    ALQ+F +M  +++ ++PN  T
Sbjct: 422 CKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFT 481

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA-CMIDILGRAGKFQEAMELVDT 561
           +  VL AC     +   K     + ++  I       A C+ID+  ++G    A  + D+
Sbjct: 482 ISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDS 541

Query: 562 MPFQANASVWGALL 575
           M  + NA  W +LL
Sbjct: 542 MS-KRNAVSWTSLL 554



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 210/431 (48%), Gaps = 66/431 (15%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWN-------- 65
           G QVHG  V +G   D FV N+LV MYAKCG   D+ ++F+ +  + VV+WN        
Sbjct: 250 GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQ 309

Query: 66  ---------------------------SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
                                      S+ S Y    F  EA+  F++M     RPN  +
Sbjct: 310 NGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVT 369

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKL------GYDSDMFSA-NALVDMYAKVGNLEDAV 151
           L S+++ACA  G  L G++ H YS+K         D+D  +  NAL+DMYAK  +LE A 
Sbjct: 370 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVAR 429

Query: 152 AVFKDI--EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE--INPNMFTYTSALKAC 207
           A+F +I  +  D+V+W  +I G   H   + AL+LF +M   +  I PN FT +  L AC
Sbjct: 430 AMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMAC 489

Query: 208 AGMELKELGRQLHCSLIKM-EIKSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           A +   + G+Q+H  +++   I SD + V   L+DMY+K G +D A+++F  M ++N ++
Sbjct: 490 ARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVS 549

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA-SFQAIGVCKQVHALS 324
           W  +++G+  +G   +A  +F  M +E +  D  T   VL + + S    GV   V   +
Sbjct: 550 WTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVEHYA 609

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLG 380
                         ++D  G+ G + +A+++      E + V  +A  S    ++   L 
Sbjct: 610 C-------------MVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELA 656

Query: 381 EEALKLYLEMQ 391
           E A K  LE++
Sbjct: 657 EFAAKKLLELK 667



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 37/261 (14%)

Query: 336 VNSLIDAYGKCGHVEDAVKIFKES---SAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
           V +LI  Y     + +A+ + +++   S   +     +I     F     AL+L+  M+ 
Sbjct: 60  VTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKT 119

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
               PD +    +  AC  +S +E G  +H  +I+ GF S+ F  N++++MY KC ++  
Sbjct: 120 LHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVH 179

Query: 453 ADRAFSEIPDRGI---VSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLC 508
           A + F E+  RGI   V+W++++   +       A+ +F +M +  G+LP+ + +V++L 
Sbjct: 180 ARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILP 239

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--------------MIDILGRAGKFQE 554
            C + GL               G+   Q H  C              ++D+  + GK ++
Sbjct: 240 VCGYLGL---------------GLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMED 284

Query: 555 AMELVDTMPFQANASVWGALL 575
           A ++ + M F+ +   W A++
Sbjct: 285 ANKVFERMRFK-DVVTWNAMV 304


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/684 (37%), Positives = 393/684 (57%), Gaps = 2/684 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+  + L  G ++H  ++ +    D  + N ++ MY KC +  D++++FDA+PER+
Sbjct: 69  LISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERN 128

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ + Y        A+ F+ +M+ SG+ P++F+  S+I AC+  GD  LGR++H 
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  + + + + NAL+ MY K   + DA+ VF  +   D++SW ++IAG     +   
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248

Query: 181 ALKLFQQMKSSEIN-PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL  F++M    +  PN F + S   AC+ +   E GRQLH   IK  +  D   G  L 
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC 308

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG +  AR++F+ +   +L+AWN +I+G    G   EA + F  M  +G+  D+ 
Sbjct: 309 DMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEI 368

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T+ ++L +  S   +    QVH    K   + D  + N+L+  Y KC  + DA+  F+E 
Sbjct: 369 TVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEM 428

Query: 360 SA-VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               DLV+  +++TA  +    EE  +L   M   +  PD    +++L A A   + E G
Sbjct: 429 RCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIG 488

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            QVH + +K G   DT   N L+++YAKCGS+  A + F  + +  +VSWS++I G AQ 
Sbjct: 489 NQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQF 548

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+EAL++F  M    V PNH+T V VL AC+H GLV E    + +MEK+FGI P +EH
Sbjct: 549 GYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREH 608

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+L RAG   EA   +  M F  +  VW  LL A + + NV+VG+ AAE +  I+
Sbjct: 609 CSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKID 668

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+ HVLL NIYAS G W++VA++R  MK   ++K PG SWIEVKD+++ F V D  H
Sbjct: 669 PSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLH 728

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVP 682
               +IY  L+E+   +  AGYVP
Sbjct: 729 PERNKIYTMLEELLLQMLDAGYVP 752



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 217/407 (53%), Gaps = 3/407 (0%)

Query: 181 ALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A+K F+ + K +     + TY   + AC+ +   E G+++H  ++K +   D  +   ++
Sbjct: 46  AIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHIL 105

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY KC S+ +A+ +F  MPE+N+++W  VI+G+ QNG    A   +  M + GV  DQ 
Sbjct: 106 NMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQF 165

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  +++K+ +S   IG+ +Q+HA  +K+ F +     N+LI  Y K   + DA+ +F   
Sbjct: 166 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRM 225

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN-PDSFVCSSLLNACANLSAYEQG 418
           +  DL++  SMI  ++Q G   EAL  + EM  + +  P+ F+  S+ +AC++L   E G
Sbjct: 226 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYG 285

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +Q+H   IKFG   D FAG SL +MYAKCG +  A   F +I    +V+W+A+I G A  
Sbjct: 286 RQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYG 345

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G  KEA+  F QM   G++P+ IT+ S+LCAC     + +          K G+      
Sbjct: 346 GDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGM-QVHGYINKMGLDLDVPV 404

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
              ++ +  +  + ++A+   + M   A+   W A+L A   +   E
Sbjct: 405 CNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAE 451



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 135/254 (53%), Gaps = 3/254 (1%)

Query: 281 EAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           EA   F ++ ++ G     +T + ++ + +  +++   K++H   +K+    D  + N +
Sbjct: 45  EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           ++ YGKC  ++DA K+F      ++V+ TS+I  Y+Q G G  AL+ Y +M    + PD 
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F   S++ AC++L     G+Q+H H++K  F +   A N+L++MY K   I DA   FS 
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSR 224

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV-LPNHITLVSVLCACNHAGLVAE 518
           +  R ++SW +MI G +Q G   EAL  F +ML  GV LPN     SV  AC+   L  E
Sbjct: 225 MATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSL-LQPE 283

Query: 519 AKHHFESMEKKFGI 532
                  M  KFG+
Sbjct: 284 YGRQLHGMSIKFGL 297


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/691 (37%), Positives = 391/691 (56%), Gaps = 9/691 (1%)

Query: 6   TSKKDLFLGLQVHG-IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           T +K L  G  +H  I+      S  ++ANSL+  YAKC +   ++ +FD I  + V+SW
Sbjct: 18  THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISW 77

Query: 65  NSLFSCYVH-----CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           N L + Y         F+ E    F+ M    I PN  + S +  A +       G++ H
Sbjct: 78  NCLINGYSQQGPTGSSFVME---LFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAH 134

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             +IK+    D+F  ++L++MY K G L +A  VF  +   + V+W  +I+G  +     
Sbjct: 135 AVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAG 194

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A ++F+ M+  E + N F +TS L A A  E  + G+Q+HC  +K  +     +   LV
Sbjct: 195 EAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALV 254

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYAKCGS+D++  +F +  +KN I W+ +I+G+ Q+G   +A  LF  M+  G+   + 
Sbjct: 255 TMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEF 314

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL  VL + +   A+   KQVH   +K  FES  YI+ +L+D Y K G  EDA K F   
Sbjct: 315 TLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYL 374

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              DLV  TSMI  Y Q G  E+AL LY  MQ   I P+    +S+L AC+NL+A++QG+
Sbjct: 375 QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGR 434

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H   IK+G   +   G++L  MYAKCG++++ +  F  +P+R I+SW+AMI GL+Q+G
Sbjct: 435 QIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNG 494

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GKEAL++F +M +    P+ +T V+VL AC+H GLV     +F  M  +FG+ P  EHY
Sbjct: 495 YGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHY 554

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM+D+L RAGK  EA E +++        +W  LLGA R Y+N E+G +A E L  +  
Sbjct: 555 ACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGS 614

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           ++SS +VLLS IY + G  ++V +VR  MK   + KEPG SWIE+K  V+ F VGD+ H 
Sbjct: 615 QESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHP 674

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
              EI  ++  +S  +   GY P   TD +D
Sbjct: 675 CIGEIRTEILRLSKQMKDEGYQPASVTDSYD 705



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 261/476 (54%), Gaps = 2/476 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +  A ++   +F G Q H + +      D FV +SL+ MY K G   ++R +FD +PER+
Sbjct: 117 IFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERN 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ S Y       EA   F+ M       NEF+ +S+++A A       G++IH 
Sbjct: 177 EVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHC 236

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G    +   NALV MYAK G+L+D++ VF+     + ++W+A+I G      +  
Sbjct: 237 LAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK 296

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF +M  + INP+ FT    L AC+     E G+Q+H  L+K+  +S   +   LVD
Sbjct: 297 ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVD 356

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK G  ++AR  F+ + + +L+ W  +I+G++QNG + +A SL+  M  EG+  ++ T
Sbjct: 357 MYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELT 416

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VLK+ ++  A    +Q+HA ++K     +  I ++L   Y KCG++E+   +F+   
Sbjct: 417 MASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP 476

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-K 419
             D+++  +MI+  +Q G G+EAL+L+ EM+ ++  PD     ++L+AC+++   + G  
Sbjct: 477 ERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWL 536

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF-SEIPDRGIVSWSAMIGG 474
              +   +FG +        +V++ ++ G + +A     S   D G+  W  ++G 
Sbjct: 537 YFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGA 592


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/637 (37%), Positives = 380/637 (59%), Gaps = 14/637 (2%)

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
            DA  +F  +   ++V+W A++ G  L+      L++F +M      P+ +T  + L AC
Sbjct: 90  RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
                 +LG+Q+H   IK   +S   +G  L  +YAK GS+D A   F  +PEKN+I W 
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 209

Query: 268 IVISGHLQNGGDME-AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
            +IS   ++   +E   SLF  M  +GV  ++ TL++V+    +   + + KQV A S K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF--------- 377
              E++  + NS +  Y + G  ++A+++F++     ++   +MI+ YAQ          
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 378 --GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
               G +AL ++ +++   + PD F  SS+L+ C+ + A EQG+Q+H   IK GF+SD  
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             ++LVNMY KCG I DA++AF E+P R  V+W++MI G +QHG+ +EA+Q+F +M   G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V PN IT VS+L AC++AGLV EA+H+F+ M+K++ I+P+ +HY CMID+  R G+ ++A
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
              +    F+ N ++W +L+   R + N+E+  +AA+ L  ++P+   T++LL N+Y S 
Sbjct: 510 FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYIST 569

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
             W +VA+VR+ MK   +      SWI +KDKVY F   DR+H ++ E+Y  L+ + +  
Sbjct: 570 ERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKA 629

Query: 676 NKAGYVPMVETDLHDVEESEKEQL--LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
              GY P    +L D E+ EK     L HHSE+LAVA GL+ TPPGAT+RV KN+ +C D
Sbjct: 630 KAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRD 689

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           CH+S +  S + +REIIVRD  R H F++G CSCG +
Sbjct: 690 CHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 242/464 (52%), Gaps = 22/464 (4%)

Query: 48  DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           D+RRLFD +PER+VV+W +L + Y         +  F EM+  G  P+ ++L + +NAC 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
            S D  LG+++HGY+IK G +S     N+L  +YAK+G+L+ A+  F  I   ++++W  
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 168 VIAGCVLHEH-NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM 226
           +I+ C   E   +  + LF  M    + PN FT TS +  C       LG+Q+     K+
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ----------- 275
             +++  V    + +Y + G  DEA  +F  M + ++I WN +ISG+ Q           
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
                +A ++F  + R  +  D  T S++L   ++  A+   +Q+HA ++K+ F SD  +
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            ++L++ Y KCG ++DA K F E      V  TSMI+ Y+Q G  +EA++L+ EM+   +
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDA 453
            P+     SLL+AC+     E+ +  +  ++K  +  +    +   +++M+ + G ++D 
Sbjct: 451 RPNEITFVSLLSACSYAGLVEEAEH-YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED- 508

Query: 454 DRAFSEIPDRGIVS----WSAMIGGLAQHGRGKEALQMFGQMLE 493
             AFS I   G       WS+++ G   HG  + A     ++LE
Sbjct: 509 --AFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE 550



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 203/378 (53%), Gaps = 25/378 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L AC +  D+ LG QVHG  +  G +S   + NSL  +YAK G+   + R F  IPE++
Sbjct: 145 TLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 204

Query: 61  VVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V++W ++ S C    + +E  +  F +M++ G+ PNEF+L+S+++ C    D  LG+++ 
Sbjct: 205 VITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQ 264

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC--VLHEH 177
            +S K+G ++++   N+ + +Y + G  ++A+ +F+ +E   I++WNA+I+G   ++   
Sbjct: 265 AFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSA 324

Query: 178 ND---------WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
            D          AL +F+ +K S + P++FT++S L  C+ M   E G Q+H   IK   
Sbjct: 325 KDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF 384

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            SD +V   LV+MY KCG + +A   F  MP +  + W  +ISG+ Q+G   EA  LF  
Sbjct: 385 LSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEE 444

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG---- 344
           M   GV  ++ T  ++L S  S+  + V +  H   +       +Y +  ++D YG    
Sbjct: 445 MRLAGVRPNEITFVSLL-SACSYAGL-VEEAEHYFDMM----KKEYCIEPVVDHYGCMID 498

Query: 345 ---KCGHVEDAVKIFKES 359
              + G VEDA    K +
Sbjct: 499 MFVRLGRVEDAFSFIKRT 516



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 161/297 (54%), Gaps = 16/297 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C ++ DL LG QV       G +++  V NS + +Y + G   ++ RLF+ + + S
Sbjct: 247 VMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS 306

Query: 61  VVSWNSLFSCYVHC-----DFLE------EAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
           +++WN++ S Y        D L+      +A+  F+++  S ++P+ F+ SS+++ C+  
Sbjct: 307 IITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM 366

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
                G +IH  +IK G+ SD+   +ALV+MY K G ++DA   F ++     V+W ++I
Sbjct: 367 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMI 426

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           +G   H     A++LF++M+ + + PN  T+ S L AC+   L E     +  ++K E  
Sbjct: 427 SGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH-YFDMMKKEYC 485

Query: 230 SDPIVG-VG-LVDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
            +P+V   G ++DM+ + G +++A   I     E N   W+ +++G  ++ G+ME A
Sbjct: 486 IEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG-CRSHGNMELA 541


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/733 (35%), Positives = 412/733 (56%), Gaps = 54/733 (7%)

Query: 43   CGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSM 102
            C N ID   L  A P  +V    +L        F ++ V   + +    +  N       
Sbjct: 985  CDNLIDPVDLISASPPSAVKQLQTLVLSIQKPKFTQQXVVLTENLCGQILDKNP------ 1038

Query: 103  INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL----VDMYAKVGNLEDAVAVFKDIE 158
                    D    +K+H    K+  D D+ S  +L    +  YA  G       +F +I 
Sbjct: 1039 --------DIKYLKKLHS---KICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP 1087

Query: 159  HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
              ++V +N +I   V +     AL +F+ M    I+P+ +TY   LKA +G E   +G Q
Sbjct: 1088 KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 1147

Query: 219  LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
            +H +++++ +  +  VG GL+ MY KCG + EA  +   MP +++++WN +++G  +NG 
Sbjct: 1148 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQ 1207

Query: 279  DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
              +A  +   M   G+  D  T++++L +V                            N+
Sbjct: 1208 FDDALEVCKEMELLGLKPDAGTMASLLPAV---------------------------TNT 1240

Query: 339  LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
             +D      +V    ++F + +   LV+   MI  Y    +  EA+ ++L+M+D  ++PD
Sbjct: 1241 CLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPD 1294

Query: 399  SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            +   +S+L AC +LSA   G+++H ++++     +    N+L++MYAKCG ++ A   F 
Sbjct: 1295 AISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFD 1354

Query: 459  EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            ++  R +VSW++MI     +G+G++A+ +F +M + G+ P+ I  VSVL AC+HAGL+ E
Sbjct: 1355 QMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDE 1414

Query: 519  AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
             +++F+ M ++  I P  EH+ CM+D+LGRAG+  EA   +  MP + N  VWGALL A 
Sbjct: 1415 GRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSAC 1474

Query: 579  RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
            R+Y N+ +G  AA+ LF + PE+S  +VLLSNIYA AG W++V  VR  MK   +KK PG
Sbjct: 1475 RVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPG 1534

Query: 639  MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            +S  E+ ++V+TF  GD+SH +SK+IY +LD +   + +AGYVP  ++ LHDVEE +KE 
Sbjct: 1535 VSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKEC 1594

Query: 699  LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
             L  HSEKLA+AF ++ T PG+ IR+ KNLR+C DCH + + ISKIV REI +RD NRFH
Sbjct: 1595 HLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFH 1654

Query: 759  HFRNGSCSCGGYW 771
            HF NG CSCG YW
Sbjct: 1655 HFYNGVCSCGDYW 1667



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 220/429 (51%), Gaps = 38/429 (8%)

Query: 36   LVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN 95
            L+  YA CG    +R +FD IP+++VV +N +   YV+     +A+  FK M   GI P+
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125

Query: 96   EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
             ++   ++ A +GS D  +G +IH   +++G D ++F  N L+ MY K G L +A  V  
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185

Query: 156  DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
            ++   D+VSWN+++AGC  +   D AL++ ++M+   + P+  T  S L A     L  +
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNV 1245

Query: 216  GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
                  S +K              +M+ K             +  K+L++WN++I+ ++ 
Sbjct: 1246 ------SFVK--------------EMFMK-------------LANKSLVSWNVMIAVYMN 1272

Query: 276  NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
            N    EA  +F  M    V  D  ++++VL +     A+ + +++H   V+   + +  +
Sbjct: 1273 NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLL 1332

Query: 336  VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             N+LID Y KCG +E A ++F +    D+V+ TSMI+AY   G G +A+ L+  MQD  +
Sbjct: 1333 ENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGL 1392

Query: 396  NPDSFVCSSLLNACANLSAYEQGK---QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
            NPDS    S+L+AC++    ++G+   ++     K     + F    +V++  + G +D+
Sbjct: 1393 NPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDE 1450

Query: 453  ADRAFSEIP 461
            A     ++P
Sbjct: 1451 AYGFIKQMP 1459



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 38/361 (10%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VLKA +  +DL++G+Q+H  VV  G D + FV N L+ MY KCG  +++ R+ D +P R 
Sbjct: 1132 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRD 1191

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VVSWNSL +        ++A+   KEM L G++P+  +++S++ A               
Sbjct: 1192 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV-------------- 1237

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                          N  +D      N+     +F  + +  +VSWN +IA  + +     
Sbjct: 1238 -------------TNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 1278

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A+ +F QM+   ++P+  +  S L AC  +    LGR++H  +++  ++ + ++   L+D
Sbjct: 1279 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALID 1338

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAKCG ++ AR +F  M  +++++W  +IS +  NG   +A SLF  M   G+  D   
Sbjct: 1339 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 1398

Query: 301  LSTVLKSVASFQAIGVCKQVHAL---SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
              +VL + +    +   +    L     K     + ++   ++D  G+ G V++A    K
Sbjct: 1399 FVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVC--MVDLLGRAGQVDEAYGFIK 1456

Query: 358  E 358
            +
Sbjct: 1457 Q 1457


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/537 (43%), Positives = 343/537 (63%)

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  +I+++++ D  +   L++ Y+KCG ++ AR +F  M E++L++WN +I  + +N  +
Sbjct: 76  HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 135

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            EA  +F  M  EG  F + T+S+VL +         CK++H LSVKT  + + Y+  +L
Sbjct: 136 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 195

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG ++DAV++F+       V  +SM+  Y Q    EEAL LY   Q   +  + 
Sbjct: 196 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 255

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           F  SS++ AC+NL+A  +GKQ+H  I K GF S+ F  +S V+MYAKCGS+ ++   FSE
Sbjct: 256 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 315

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           + ++ +  W+ +I G A+H R KE + +F +M +DG+ PN +T  S+L  C H GLV E 
Sbjct: 316 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 375

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           +  F+ M   +G+ P   HY+CM+DILGRAG   EA EL+ ++PF   AS+WG+LL + R
Sbjct: 376 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCR 435

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           +YKN+E+ + AAE LF +EPE +  HVLLSNIYA+   W+ +AK R+ ++D  +KK  G 
Sbjct: 436 VYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGK 495

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           SWI++KDKV+TF+VG+  H R +EI + LD +     K GY P VE +LHDVE  +KE+L
Sbjct: 496 SWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEEL 555

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           L  HSEKLA+ FGL+  P  + +R+ KNLRICVDCH   +  S    R IIVRDVNR
Sbjct: 556 LMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 200/359 (55%), Gaps = 3/359 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C     +      HG ++    + D  + N L+  Y+KCG    +R++FD + ERS
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++   Y       EA+  F EM   G + +EF++SS+++AC  + D+L  +K+H 
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K   D +++   AL+D+YAK G ++DAV VF+ ++    V+W++++AG V +++ + 
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+++ +   +  N FT +S + AC+ +     G+Q+H  + K    S+  V    VD
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ E+ +IF  + EKNL  WN +ISG  ++    E   LF  M ++G+  ++ T
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFK 357
            S++L        +   ++   L ++T +     +V  + ++D  G+ G + +A ++ K
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 416



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 207/397 (52%), Gaps = 8/397 (2%)

Query: 85  KEMVLSGIRPNEFSLSSMINA----CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDM 140
           +E V  G   NEFS  ++++     CA +G  +  +  HG  I++  + D+   N L++ 
Sbjct: 38  QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 97

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           Y+K G +E A  VF  +    +VSWN +I     +     AL +F +M++     + FT 
Sbjct: 98  YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 157

Query: 201 TSALKACAGMELKELG-RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +S L AC G+    L  ++LHC  +K  I  +  VG  L+D+YAKCG + +A  +F  M 
Sbjct: 158 SSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 216

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           +K+ + W+ +++G++QN    EA  L+    R  +  +Q TLS+V+ + ++  A+   KQ
Sbjct: 217 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 276

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HA+  K+ F S+ ++ +S +D Y KCG + ++  IF E    +L    ++I+ +A+   
Sbjct: 277 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 336

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGN 438
            +E + L+ +MQ   ++P+    SSLL+ C +    E+G++   +    +G   +    +
Sbjct: 337 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 396

Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
            +V++  + G + +A      IP D     W +++  
Sbjct: 397 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 433



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 16/339 (4%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++  +  +L+  A   A+   K  H   ++   E D  ++N LI+AY KCG VE A ++F
Sbjct: 52  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA-NLSAY 415
                  LV+  +MI  Y +  +  EAL ++LEM++       F  SS+L+AC  N  A 
Sbjct: 112 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 171

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E  K++H   +K     + + G +L+++YAKCG I DA + F  + D+  V+WS+M+ G 
Sbjct: 172 E-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 230

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQP 534
            Q+   +EAL ++ +     +  N  TL SV+CAC N A L+   + H    +  FG   
Sbjct: 231 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 290

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEM 593
                A  +D+  + G  +E+  +   +  + N  +W  ++ G A+  +  EV      M
Sbjct: 291 FVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEV------M 341

Query: 594 LFAIEPEKSSTH---VLLSNIYASAGMWDNVAKVRRFMK 629
           +   + ++   H   V  S++ +  G    V + RRF K
Sbjct: 342 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 380


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/555 (41%), Positives = 342/555 (61%), Gaps = 1/555 (0%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           RQ+H  ++      D ++   L+  YA+  ++D+A  +F  +  ++   W++++ G  + 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G      + F  + R GV  D  TL  V+++      + + + +H + +K    SD ++ 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            SL+D Y KC  VEDA ++F+   + DLV  T MI AYA      E+L L+  M++  + 
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVV 198

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD     +++NACA L A  + +  + +I++ GF  D   G ++++MYAKCGS++ A   
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  + ++ ++SWSAMI     HGRGK+A+ +F  ML   +LPN +T VS+L AC+HAGL+
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            E    F SM ++  ++P  +HY CM+D+LGRAG+  EA+ L++ M  + +  +W ALLG
Sbjct: 319 EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A RI+  +E+ + AA  L  ++P+    +VLLSNIYA AG W+ VAK R  M   KLKK 
Sbjct: 379 ACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKI 438

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           PG +WIEV +K Y F+VGDRSH +SKEIY  L  +   L  AGYVP  +  L DVEE  K
Sbjct: 439 PGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVK 498

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           +++LY HSEKLA+AFGLIA P G  IR+ KNLR+C DCHT  + +S I+ R IIVRD NR
Sbjct: 499 QEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANR 558

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF +G+CSCG YW
Sbjct: 559 FHHFNDGTCSCGDYW 573



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 210/413 (50%), Gaps = 20/413 (4%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           +++F   QVH  VV  G   D  +AN L+  YA+     D+  LFD +  R   +W+ + 
Sbjct: 14  RNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMV 73

Query: 69  SCYVHCDFLEEAVCF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
             +      + A C+  F+E++  G+ P+ ++L  +I  C    D  +GR IH   +K G
Sbjct: 74  GGFAKAG--DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHG 131

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI---AGCVLHEHNDWALK 183
             SD F   +LVDMYAK   +EDA  +F+ +   D+V+W  +I   A C  +E    +L 
Sbjct: 132 LLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE----SLV 187

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           LF +M+   + P+     + + ACA +      R  +  +++     D I+G  ++DMYA
Sbjct: 188 LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYA 247

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
           KCGS++ AR +F  M EKN+I+W+ +I+ +  +G   +A  LF  M    +  ++ T  +
Sbjct: 248 KCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVS 307

Query: 304 VLKSVASFQAI--GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +L + +    I  G+ +  +++  + A   D      ++D  G+ G +++A+++ +  + 
Sbjct: 308 LLYACSHAGLIEEGL-RFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366

Query: 362 -VDLVACTSMITA---YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
             D    ++++ A   +++  L E+A    LE+Q +  NP  +V  S + A A
Sbjct: 367 EKDERLWSALLGACRIHSKMELAEKAANSLLELQPQ--NPGHYVLLSNIYAKA 417



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 147/274 (53%), Gaps = 3/274 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ C  + DL +G  +H +V+  G  SD FV  SLV MYAKC    D++RLF+ +  + 
Sbjct: 107 VIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKD 166

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+W  +   Y  C+  E  V  F  M   G+ P++ ++ +++NACA  G     R  + 
Sbjct: 167 LVTWTVMIGAYADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFAND 225

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G+  D+    A++DMYAK G++E A  VF  ++  +++SW+A+IA    H     
Sbjct: 226 YIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKD 285

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLV 239
           A+ LF  M S  I PN  T+ S L AC+   L E G +   S+ +   ++ D      +V
Sbjct: 286 AIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMV 345

Query: 240 DMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISG 272
           D+  + G +DEA R+I  +  EK+   W+ ++  
Sbjct: 346 DLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/588 (42%), Positives = 354/588 (60%), Gaps = 15/588 (2%)

Query: 193 INPNMFTYTSALKACAGMELKE-LGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDE 250
           + PN FT+ SA KA A    +  +G Q+H   I+   +  DP V    +DMY K G +  
Sbjct: 6   LRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKL 65

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           AR +F  MP +N++AWN V++  + +G  +E    + +  RE  G     L  V+ + A 
Sbjct: 66  ARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAY-FGLREAGG-----LPNVVSACAF 119

Query: 311 FQA------IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           F A      + + +Q H   VK  FE D  ++NS++D YGKC     A  +F      + 
Sbjct: 120 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 179

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V+  SM+ AYAQ G  EEA   YL  +     P  F+ SS L  CA L     G+ +H  
Sbjct: 180 VSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAV 239

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
            ++    ++ F  ++LV+MY KCG ++DA++ F E P R +V+W+AMIGG A  G  + A
Sbjct: 240 AVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNA 299

Query: 485 LQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           L +F  M+  G   PN+ITLV+V+ +C+  GL  +    FE+M ++FGI+P  EHYAC++
Sbjct: 300 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 359

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           D+LGRAG  ++A E++  MP + + SVWGALLGA +++   E+G+ AAE LF ++P+ S 
Sbjct: 360 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG 419

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            HVLLSN++ASAG W     +R+ MK+  +KK+PG SW+  K+ V+ F   D  H    E
Sbjct: 420 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 479

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           I A L ++   +  AGY+P  +  L+D+EE EKE  ++ HSEKLA+AFGLI  PPG  IR
Sbjct: 480 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 539

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + KNLRICVDCH +F+FIS IV REIIVRD NRFHHF+   CSCG YW
Sbjct: 540 IMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 232/455 (50%), Gaps = 13/455 (2%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGD-SLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKV 144
           M+  G+RPN+F+  S   A A +   S +G +IH  +I+ GY   D F + A +DMY K 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G L+ A  +F ++ + ++V+WNAV+   VL       ++ +  ++ +   PN+ +  +  
Sbjct: 61  GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            ACAG     LG Q H  ++K   + D  V   +VD Y KC    +AR +F  M  +N +
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +W  +++ + QNG + EA + +    R G       +S+ L + A    + + + +HA++
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           V++  +++ ++ ++L+D YGKCG VEDA +IF E+   +LV   +MI  YA  G  + AL
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300

Query: 385 KLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVN 442
            ++ +M +  E  P+     +++ +C+     + G ++   +  +FG    T     +V+
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 360

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLP 498
           +  + G  + A      +P R  +S W A++G    HG+   G+ A +   + L+     
Sbjct: 361 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE-LDPQDSG 419

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           NH+ L ++  +   AG  AEA    + M K  GI+
Sbjct: 420 NHVLLSNMFAS---AGRWAEATDIRKEM-KNVGIK 450



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 210/458 (45%), Gaps = 42/458 (9%)

Query: 13  LGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           +G Q+H + +  G+   D FV+ + + MY K G    +R LF  +P R+VV+WN++ +  
Sbjct: 29  IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 88

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V      E +  +  +  +G  PN  S  +  NACAG+    LG + HG+ +K G++ D+
Sbjct: 89  VLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDV 148

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
              N++VD Y K      A AVF  +   + VSW +++A    +   + A   +   + S
Sbjct: 149 SVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRS 208

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
              P  F  +SAL  CAG+    LGR LH   ++  I ++  V   LVDMY KCG +++A
Sbjct: 209 GEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDA 268

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVAS 310
             IF+  P++NL+ WN +I G+   G    A  +F  M R G    +  TL  V+ S + 
Sbjct: 269 EQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS- 327

Query: 311 FQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                          +     D Y +  ++ + +G    +E   + +  +  VDL+    
Sbjct: 328 ---------------RGGLTKDGYELFETMRERFG----IEPRTEHY--ACVVDLL---- 362

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
                 + G+ E+A   Y  +Q   + P   V  +LL AC      E G+     + +  
Sbjct: 363 -----GRAGMEEQA---YEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE-- 412

Query: 430 FMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
            +    +GN   L NM+A  G   +A     E+ + GI
Sbjct: 413 -LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGI 449



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 11/294 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
             AC     L LG Q HG VV  GF+ D  V NS+V  Y KC     +R +FD +  R+ 
Sbjct: 120 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 179

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW S+ + Y      EEA   +     SG  P +F +SS +  CAG     LGR +H  
Sbjct: 180 VSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAV 239

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           +++   D+++F A+ALVDMY K G +EDA  +F +    ++V+WNA+I G         A
Sbjct: 240 AVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNA 299

Query: 182 LKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSL---IKMEIKSDPIVGVG 237
           L +F  M +S E  PN  T  + + +C+   L + G +L  ++     +E +++    V 
Sbjct: 300 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACV- 358

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIA-WNIVISGHLQNG----GDMEAASLF 286
            VD+  + G  ++A  +   MP +  I+ W  ++     +G    G + A  LF
Sbjct: 359 -VDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLF 411


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 369/625 (59%), Gaps = 17/625 (2%)

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
           +W+++I     H     +   F  M+S  + PN   + S LKA   ++  +L   LH   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 224 IKMEIKSDPIVGVGLVDMYAKC---------------GSMDEARMIFHLMPEKNLIAWNI 268
           +++ + SD  +   L++ YAK                  +D  + +F +MP +++++WN 
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 269 VISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           VI+G  QNG  +EA  +   M + G +  D  TLS++L   A    +   K++H  +V+ 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            F+ D +I +SLID Y KC  +E +++ F      D ++  S+I    Q G  +  L  +
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             M    + P +   SS++ ACA+L+A   G+Q+H  I++ GF  + F  +SLV+MYAKC
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G+I  A   F  I  R +V+W+A+I G A HG   +A+ +F  MLEDGV P ++  ++VL
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP-FQA 566
            AC+HAGLV E   +F SME+ FGI P  EHYA + D+LGRAG+ +EA + +  M   Q 
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
             SVW  LL A R +K+VE+ +   + L +++ E    +VL+SNIY++A  W + A++R 
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
            M+   LKK P  SWIEV ++V+TF  GD+SH    +I   LD + + + K GYV     
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            LHDV+E  K +LL++HSE+LA+A+G+I+T  G TIRV KN+R+C DCHT+ +FI+KIV 
Sbjct: 617 VLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVG 676

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           REI VRD +RFHHF+NGSCSCG YW
Sbjct: 677 REITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 175/310 (56%), Gaps = 16/310 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK---CGNFIDS-------- 49
           +LKA T  K   L   +H   V  G DSD ++AN+L+  YAK    G   D         
Sbjct: 116 LLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESG 175

Query: 50  ----RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMIN 104
               +++FD +P R VVSWN++ + +       EA+   +EM  +G ++P+ F+LSS++ 
Sbjct: 176 IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILP 235

Query: 105 ACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS 164
             A   D   G++IHGY+++ G+D D+F  ++L+DMYAK   LE ++  F  +   D +S
Sbjct: 236 IFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAIS 295

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           WN++IAGCV +   D  L  F++M    + P   +++S + ACA +    LGRQLH  ++
Sbjct: 296 WNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIV 355

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
           ++    +  +   LVDMYAKCG++  AR +F  + +++++AW  +I G   +G  ++A S
Sbjct: 356 RLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVS 415

Query: 285 LFPWMYREGV 294
           LF  M  +GV
Sbjct: 416 LFENMLEDGV 425



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 135/248 (54%), Gaps = 11/248 (4%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           D+  G ++HG  V  GFD D F+ +SL+ MYAKC     S R F  +P +  +SWNS+ +
Sbjct: 242 DVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIA 301

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
             V     +  + FF+ M+   ++P   S SS+I ACA      LGR++HG  ++LG+D 
Sbjct: 302 GCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDD 361

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           + F A++LVDMYAK GN++ A  VF  I+  D+V+W A+I GC +H H   A+ LF+ M 
Sbjct: 362 NEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENML 421

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL------VDMYA 243
              + P    + + L AC+   L + G +   S+     + D  +  GL       D+  
Sbjct: 422 EDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSM-----ERDFGIAPGLEHYAAVADLLG 476

Query: 244 KCGSMDEA 251
           + G ++EA
Sbjct: 477 RAGRLEEA 484


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/712 (33%), Positives = 407/712 (57%), Gaps = 40/712 (5%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
            SS+  A A +  +    K+H   I LG    +  +  L+  YA   +   + +VF+ + 
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR-LA 74

Query: 159 HP--DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
            P  ++  WN++I     +     AL L+ + +   + P+ +T+ S + ACAG+   E+ 
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H  ++ M   SD  +G  L+DMY +   +D+AR +F  MP +++++WN +ISG+  N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 277 GGDMEAASLFPW---MYREGVGF---DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G   EA  ++     ++ E V     D  T++++L++      +   K VH   + + +E
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            D    N LI+ Y KCG++  + ++F      D V+  SMI  Y Q G   ++LK++  M
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314

Query: 391 QDREI-------------------------------NPDSFVCSSLLNACANLSAYEQGK 419
           + R+I                                PD     S+L  C+ L+A  QGK
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 374

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  I K G  SD   GN L+ MY+KCGS+ ++ + F  +  + +V+W+A+I     +G
Sbjct: 375 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 434

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GK+A++ FG+M   G++P+H+  V+++ AC+H+GLV E  ++F  M+K + I+P  EHY
Sbjct: 435 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY 494

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           AC++D+L R+    +A + + +MP + ++S+WGALL A R+  + E+ +  +E +  + P
Sbjct: 495 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP 554

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           + +  +VL+SNIYA+ G WD V  +R+ +K   LKK+PG SW+E+++KVY F  G +   
Sbjct: 555 DDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFE 614

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           + +E+   L  ++ L+ K GY+  ++  LHD++E EK  +L  HSE+LA+AFGL+ T PG
Sbjct: 615 QFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPG 674

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             ++V KNLR+C DCHT  ++ISKIV RE++VRD NRFH F++G+CSCG YW
Sbjct: 675 TPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 258/520 (49%), Gaps = 44/520 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD-AIPERSVVSWNSLFSCYVHC 74
           ++H +++  G       +  L+  YA   +   S  +F  A P  +V  WNS+     H 
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
               EA+  + E     ++P+ ++  S+INACAG  D  + + IH   + +G+ SD++  
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL-------KLFQQ 187
           NAL+DMY +  +L+ A  VF+++   D+VSWN++I+G   + + + AL       KLF +
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M  ++  P++ T TS L+AC  +   E G+ +H  +I    + D      L++MYAKCG+
Sbjct: 214 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNG--GD-------MEAASLFPW---------- 288
           +  ++ +F  M  K+ ++WN +I+ ++QNG  GD       M+A  +  W          
Sbjct: 273 LLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS 332

Query: 289 ------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
                       M  EGV  D  T+ ++L   +   A    K++H    K   ESD  + 
Sbjct: 333 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 392

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N LI+ Y KCG + ++ ++FK     D+V  T++I+A   +G G++A++ + EM+   I 
Sbjct: 393 NVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIV 452

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDAD 454
           PD     +++ AC++    E+G   + H +K  +  +    +   +V++ ++   +D A+
Sbjct: 453 PDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 511

Query: 455 RAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE 493
                +P +   S W A++      G  + A ++  +++E
Sbjct: 512 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE 551



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 241/539 (44%), Gaps = 88/539 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC    D  +   +H  V+  GF SD ++ N+L+ MY +  +   +R++F+ +P R 
Sbjct: 121 VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 180

Query: 61  VVSWNSLFSCYVHCDFLEEA-------VCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           VVSWNSL S Y    +  EA       +  F EMV +  +P+  +++S++ AC   GD  
Sbjct: 181 VVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMV-NQFKPDLLTITSILQACGHLGDLE 239

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL-------------------------- 147
            G+ +H Y I  GY+ D  ++N L++MYAK GNL                          
Sbjct: 240 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYI 299

Query: 148 -----EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
                 D++ VF++++  DI++WN +IA CV  E  +  L++  +M++  + P+M T  S
Sbjct: 300 QNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLS 359

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            L  C+ +  K  G+++H  + K+ ++SD  VG  L++MY+KCGS+  +  +F LM  K+
Sbjct: 360 ILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKD 419

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           ++ W  +IS     G   +A   F  M   G+  D          VA    I  C   H+
Sbjct: 420 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH---------VAFVAIIFACS--HS 468

Query: 323 LSVKTAFE-----SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
             V+           DY +   I+ Y               +  VDL++ ++++     F
Sbjct: 469 GLVEEGLNYFHRMKKDYKIEPRIEHY---------------ACVVDLLSRSALLDKAEDF 513

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
            L               + PDS +  +LL+AC      E  ++V   II+     DT   
Sbjct: 514 ILS------------MPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN-PDDTGYY 560

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGLAQHGRGKEALQMFGQM 491
             + N+YA  G  D        I  RG+      SW  +   +   G G +  + F ++
Sbjct: 561 VLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEV 619



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 9/285 (3%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           QT  S++ +++AS        ++H+L +             LI  Y        +  +F+
Sbjct: 13  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72

Query: 358 ESSAVDLVAC-TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +S  + V    S+I A    GL  EAL LY E Q   + PD++   S++NACA L  +E
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
             K +H  ++  GF SD + GN+L++MY +   +D A + F E+P R +VSW+++I G  
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192

Query: 477 QHGRGKEALQMFGQMLE------DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
            +G   EAL+++ Q ++      +   P+ +T+ S+L AC H G +   K+  + M    
Sbjct: 193 ANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITS- 251

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           G +        +I++  + G    + E+   M  + + S W +++
Sbjct: 252 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS-WNSMI 295


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/677 (39%), Positives = 386/677 (57%), Gaps = 4/677 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDI 157
           L+  + A   +  + LGR  H  +++L   +   F    LV++Y+K+     A A     
Sbjct: 20  LAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAAD 79

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL-G 216
             P +VS+ A I+G   H     AL  F  M    + PN FT+ SA KA A    +   G
Sbjct: 80  PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139

Query: 217 RQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
            QLH   ++   +  D  V    +DMY K G +  AR +F  MP +N++AWN V++  + 
Sbjct: 140 TQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVL 199

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           +G  +E    +  +   G   +  ++     + A    + + +Q +    K  F  D  +
Sbjct: 200 DGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSV 259

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            NS++D YGKC  V  A  +F      + V+  SM+ AYAQ G  EEA  +YL  +    
Sbjct: 260 SNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGE 319

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            P  F+ SS+L  CA L   + G+ +H   ++    S+ F  ++LV+MY KCG I+DA++
Sbjct: 320 EPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQ 379

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAG 514
            F E+P R +V+W+AMIGG A  G    AL +F +M +     PN+ITLV+VL AC+  G
Sbjct: 380 VFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGG 439

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           L  E    F++M+ +FGI+P  EHYAC++D+L RAG  + A +++  MP + + SVWGAL
Sbjct: 440 LTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGAL 499

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           LG  +++   E+G+ AAE LF ++P+ S  HVLLSN+ ASAG W     VR+ MK+  +K
Sbjct: 500 LGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIK 559

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           K+PG SWI  K+ V+ F   D +H  ++EI A L ++   +  AGY+P  +  L+D+EE 
Sbjct: 560 KDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEE 619

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           EKE  ++ HSEKLA+AFGLI  PPG  IR+ KNLRICVDCH +F+FIS I  REIIVRD 
Sbjct: 620 EKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDN 679

Query: 755 NRFHHFRNGSCSCGGYW 771
           N FHHF+N  CSC  YW
Sbjct: 680 NMFHHFKNYECSCKDYW 696



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 241/486 (49%), Gaps = 15/486 (3%)

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMIN-ACAGSGDSLLG 115
           P  +VVS+ +  S         +A+  F  M+  G+RPN+F+  S    A +    S  G
Sbjct: 80  PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139

Query: 116 RKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
            ++H  +++ GY   D F + A +DMY K G L  A  +F ++ + ++V+WNAV+   VL
Sbjct: 140 TQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVL 199

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                  ++ +  ++ +   PN+ +  +   ACAGM    LG Q +  + K     D  V
Sbjct: 200 DGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSV 259

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              +VD Y KC  + +AR +F  M  +N ++W  ++  + QNG + EA  ++    R G 
Sbjct: 260 SNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGE 319

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
                 +S+VL + A    + + + +HA++V++  +S+ ++ ++L+D YGKCG +EDA +
Sbjct: 320 EPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQ 379

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLS 413
           +F E    +LV   +MI  YA  G    AL ++ +M   +E  P+     ++L AC+   
Sbjct: 380 VFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGG 439

Query: 414 AYEQGKQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAM 471
             ++G ++      +FG          +V++  + G  + A +    +P R  +S W A+
Sbjct: 440 LTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGAL 499

Query: 472 IGGLAQHGRGK----EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           +GG   HG+ +     A ++F    +D    NH+ L ++L +   AG  AEA    + M 
Sbjct: 500 LGGCKMHGKTELGRIAAEKLFELDPQDS--GNHVLLSNMLAS---AGRWAEATDVRKEM- 553

Query: 528 KKFGIQ 533
           K  GI+
Sbjct: 554 KNVGIK 559



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 9/350 (2%)

Query: 14  GLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G Q+H + +  G+   D FV+ + + MY K G    +RRLFD +P R+VV+WN++ +  V
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                 E V  +  +  +G  PN  S+ +  NACAG  +  LG + +G+  K G+  D+ 
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
            +N++VD Y K   +  A AVF  +   + VSW +++     +   + A  ++   + + 
Sbjct: 259 VSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAG 318

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
             P  F  +S L  CAG+   +LGR LH   ++  I S+  V   LVDMY KCG +++A 
Sbjct: 319 EEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAE 378

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASF 311
            +F  MP++NL+ WN +I G+   G    A S+F  M   +    +  TL  VL + +  
Sbjct: 379 QVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRG 438

Query: 312 QAIGVCKQVHAL--SVKTAFESDDYIVN--SLIDAYGKCGHVEDAVKIFK 357
              G+ K+ + L  ++K  F  +  I +   ++D   + G  E A KI +
Sbjct: 439 ---GLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQ 485



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 13/295 (4%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
             AC    +L LG Q +G V   GF  D  V+NS+V  Y KC     +R +FD +  R+ 
Sbjct: 229 FNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNN 288

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW S+   Y      EEA   +     +G  P +F +SS++  CAG     LGR +H  
Sbjct: 289 VSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAV 348

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC--VLHEHND 179
           +++   DS++F A+ALVDMY K G +EDA  VF ++   ++V+WNA+I G   +   HN 
Sbjct: 349 AVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHN- 407

Query: 180 WALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--V 236
            AL +F +M    E  PN  T  + L AC+   L + G +L  ++ K     +P +    
Sbjct: 408 -ALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTM-KWRFGIEPRIEHYA 465

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIA-WNIVISGHLQNG----GDMEAASLF 286
            +VD+  + G  + A  I   MP +  I+ W  ++ G   +G    G + A  LF
Sbjct: 466 CVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLF 520



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 7/193 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L LG  +H + V +  DS+ FVA++LV MY KCG   D+ ++F  +P+R+
Sbjct: 329 VLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRN 388

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI- 118
           +V+WN++   Y H      A+  F +M++     PN  +L +++ AC+  G +  G ++ 
Sbjct: 389 LVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELF 448

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
                + G +  +     +VD+  + G  E A  + + +   P I  W A++ GC +H  
Sbjct: 449 QTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGK 508

Query: 178 NDW----ALKLFQ 186
            +     A KLF+
Sbjct: 509 TELGRIAAEKLFE 521


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/753 (34%), Positives = 421/753 (55%), Gaps = 22/753 (2%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F  D  + N +V  Y KCG   D+R +F +I   +V SW  L + Y      +  +   +
Sbjct: 112 FSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY---SIKLGYDSDMFSANALVDMYA 142
           +M L G+ PN  +L+++I A +  GD    RKIH     + +L YD  + +A  L+DMYA
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTA--LIDMYA 229

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K G++  A  VF    + D+   NA+I+  +   +   A+  F +++ S + PN  TY  
Sbjct: 230 KCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYAL 289

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
             +ACA   +    R  H   I  +++ D +V   LV MY++CGS+++AR +F  MP KN
Sbjct: 290 LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKN 349

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           ++ WN++I+G+ Q G   EA  L+  M   GV  D+ T   VL+S +  + +   + +H 
Sbjct: 350 VVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLG 380
             V   ++S   ++++LI  Y  CG + DAV +F +  ++   +++ T+M+TA  + G G
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
             AL L+ +M    +  +     S ++AC+++ A  +G  +   +I  G++ D   G SL
Sbjct: 470 RSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSL 529

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           +N+Y KCG +D A   F  +  + IV+W+ ++   +Q+G    + ++  +M  DG  PN 
Sbjct: 530 INLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNE 589

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +TL+++L  C+H GLVA+A  +F SM     + P  EHY C++D+LGR+G+ +E    + 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
           + PF  ++ +W +LLG+  I+ +VE G  AA  +  ++P+ +S +VLLSN++A+ GM D 
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V  + +   +  +KKE   S+IEV   V+ F V    H   ++I A+L E S+ + +AG+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           VP     LHDV          +H EKLA+AFG I++PPG  + V KNLR+CV CH   + 
Sbjct: 770 VP-----LHDVRG--------YHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 741 ISKIVSREIIVRDVNRFHHFR--NGSCSCGGYW 771
           I K+  R+I VR+ NR HHFR  + SCSCG YW
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 239/531 (45%), Gaps = 78/531 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC +          H   + +    D  V  +LV MY++CG+  D+RR+FD +P ++
Sbjct: 290 LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKN 349

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN + + Y    + +EA+  +  M  +G+ P+E +  +++ +C+ +     GR IH 
Sbjct: 350 VVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHPDIVSWNAVIAGCVLHEHN 178
           + +  GYDS +   +AL+ MY+  G+L DAV VF      H  ++SW A++     +   
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF++M    +  N+ T+ S + AC+ +     G  +   +I      D ++G  L
Sbjct: 470 RSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSL 529

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +++Y KCG +D A  +FH +  KN++ WN +++   QNG +  +A L   M  +G   ++
Sbjct: 530 INLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNE 589

Query: 299 TTLSTVL----------KSVASFQAI--GVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            TL  +L          K+V+ F+++  G C       V T   S+ Y    L+D  G+ 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCL------VPT---SEHY--GCLVDLLGRS 638

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G +E+ V+ F  S    L                                 DS +  SLL
Sbjct: 639 GQLEE-VEAFISSKPFSL---------------------------------DSVLWMSLL 664

Query: 407 NACANLSAYEQGKQVHVHII--------KFGFMSDTFAG-------NSLVNMYAKCGSID 451
            +C   S  E+G +    ++         +  +S+ FA         SL  +  +     
Sbjct: 665 GSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKK 724

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGR--GKEALQMFGQMLEDGVLPNH 500
           +  R++ E+   G+V    +  GL + G   G +  +   +M E G +P H
Sbjct: 725 EQSRSYIEV--NGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVPLH 773



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 159/337 (47%), Gaps = 13/337 (3%)

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D     ++LK      A+    Q H +S    F  D  ++N +++AYGKCG V+DA  +F
Sbjct: 82  DPAAYVSLLKQAGDVTALKTI-QAH-ISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVF 139

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 ++ + T ++ AYAQ G  +  L+L  +M    + P++   ++++ A + L  ++
Sbjct: 140 SSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWD 199

Query: 417 QGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + +++H        ++ D     +L++MYAKCG I  A+  F +  ++ +   +AMI   
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHFESMEKKFGIQP 534
            Q G   +A+  F ++   G+ PN +T   +  AC   G+ ++A+  H   +  K  ++P
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSK--LRP 317

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG--AARIYKNVEVGQHAAE 592
                  ++ +  R G  ++A  + D MP + N   W  ++   A   Y +  +  + + 
Sbjct: 318 DVVVNTALVSMYSRCGSLEDARRVFDRMPGK-NVVTWNVMIAGYAQEGYTDEALQLYVSM 376

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
               +EP++    +   N+  S  + +++A  R   K
Sbjct: 377 EAAGVEPDE----ITFVNVLESCSLAEHLAAGRDIHK 409


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/729 (35%), Positives = 411/729 (56%), Gaps = 20/729 (2%)

Query: 44  GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI 103
           GN +D   +F+ +       WN +   Y +    +EA+ F+  M   GIR + F+   +I
Sbjct: 75  GNALD---MFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVI 131

Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
            AC      ++G+K+HG  IK+G+D D++  N L+DMY K+G +E A  VF ++   D+V
Sbjct: 132 KACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLV 191

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
           SWN++++G  +      +L  F++M       + F   SAL AC+       G ++HC +
Sbjct: 192 SWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQV 251

Query: 224 IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
           I+ E++ D +V   L+DMY KCG +D A  +F+ +  KN++AWN +I      GG  E  
Sbjct: 252 IRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI------GGMQEDD 305

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
            + P         D  T+  +L S +   A+   K +H  +++  F     +  +L+D Y
Sbjct: 306 KVIP---------DVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMY 356

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
           GKCG ++ A  +F + +  ++V+  +M+ AY Q    +EALK++  + +  + PD+   +
Sbjct: 357 GKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIA 416

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           S+L A A L++  +GKQ+H +I+K G  S+TF  N++V MYAKCG +  A   F  +  +
Sbjct: 417 SVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCK 476

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +VSW+ MI   A HG G+ ++Q F +M   G  PN  T VS+L AC+ +GL+ E    F
Sbjct: 477 DVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFF 536

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN 583
            SM+ ++GI P  EHY CM+D+LGR G   EA   ++ MP    A +WG+LL A+R + +
Sbjct: 537 NSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHND 596

Query: 584 VEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
           V + + AA  + +++ + +  +VLLSN+YA AG W++V +++  MK+  L K  G S ++
Sbjct: 597 VVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVD 656

Query: 644 VKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV-PMVETDLHDVEESEKEQLLYH 702
           +  +  +F   DRSHA +  IY  LD +   + +  Y+  + +    DV +       Y 
Sbjct: 657 INGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEY- 715

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HS KLA+ FGLI+T  G  + V+KN RIC DCH + + IS++  REI+V D   FHHFR+
Sbjct: 716 HSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRD 775

Query: 763 GSCSCGGYW 771
           G CSC  YW
Sbjct: 776 GCCSCRDYW 784



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 238/463 (51%), Gaps = 18/463 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC     L +G +VHG ++  GFD D +V N L+ MY K G    + ++FD +P R 
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRD 189

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VSWNS+ S Y +  D L   +C FKEM+  G + + F + S + AC+       G +IH
Sbjct: 190 LVSWNSMVSGYQIDGDGLSSLMC-FKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIH 248

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              I+   + D+    +L+DMY K G ++ A  VF  I   +IV+WNA+I G        
Sbjct: 249 CQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG-------- 300

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
                    +  ++ P++ T  + L +C+       G+ +H   I+       ++   LV
Sbjct: 301 -------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALV 353

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY KCG +  A  +F+ M EKN+++WN +++ ++QN    EA  +F  +  E +  D  
Sbjct: 354 DMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAI 413

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T+++VL +VA   +    KQ+H+  +K    S+ +I N+++  Y KCG ++ A + F   
Sbjct: 414 TIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGM 473

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+  +MI AYA  G G  +++ + EM+ +   P+     SLL AC+     ++G 
Sbjct: 474 VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGW 533

Query: 420 QVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
                + +++G          ++++  + G++D+A     E+P
Sbjct: 534 GFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMP 576



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 216/441 (48%), Gaps = 17/441 (3%)

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           + + G + +A+ +F+ + H D   WN +I G   +     A+  + +M+   I  + FT+
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
              +KAC  +    +G+++H  LIK+    D  V   L+DMY K G ++ A  +F  MP 
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           ++L++WN ++SG+  +G  + +   F  M R G   D+  + + L + +    +    ++
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           H   +++  E D  +  SLID YGKCG V+ A ++F    + ++VA  +MI         
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM------ 301

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
                     +D ++ PD     +LL +C+   A  +GK +H   I+  F+       +L
Sbjct: 302 ---------QEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MY KCG +  A+  F+++ ++ +VSW+ M+    Q+ + KEAL+MF  +L + + P+ 
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDA 412

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           IT+ SVL A       +E K    S   K G+         ++ +  + G  Q A E  D
Sbjct: 413 ITIASVLPAVAELASRSEGK-QIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFD 471

Query: 561 TMPFQANASVWGALLGAARIY 581
            M  +   S W  ++ A  I+
Sbjct: 472 GMVCKDVVS-WNTMIMAYAIH 491



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 181/377 (48%), Gaps = 24/377 (6%)

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           + + G M  A  +F  M   +   WN++I G+  NG   EA   +  M  EG+  D  T 
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             V+K+     A+ V ++VH   +K  F+ D Y+ N LID Y K G +E A K+F E   
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DLV+  SM++ Y   G G  +L  + EM       D F   S L AC+       G ++
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  +I+     D     SL++MY KCG +D A+R F+ I  + IV+W+AMIGG+ +    
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE---- 303

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYA 540
                      +D V+P+ IT++++L +C+ +G + E K  H  ++ K F   P      
Sbjct: 304 -----------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMF--LPYLVLET 350

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI--E 598
            ++D+ G+ G+ + A  + + M  + N   W  ++ A   Y   E  + A +M   I  E
Sbjct: 351 ALVDMYGKCGELKLAEHVFNQMN-EKNMVSWNTMVAA---YVQNEQYKEALKMFQHILNE 406

Query: 599 PEKSSTHVLLSNIYASA 615
           P K     + S + A A
Sbjct: 407 PLKPDAITIASVLPAVA 423



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 9/240 (3%)

Query: 346 CGHVE-----DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           CG VE     +A+ +F++ +  D      +I  Y   GL +EA+  Y  M+   I  D+F
Sbjct: 66  CGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNF 125

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
               ++ AC  L A   G++VH  +IK GF  D +  N L++MY K G I+ A++ F E+
Sbjct: 126 TFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEM 185

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN-HAGLVAEA 519
           P R +VSW++M+ G    G G  +L  F +ML  G   +   ++S L AC+    L +  
Sbjct: 186 PVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGM 245

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           + H + +  +  +  M +    +ID+ G+ GK   A E V    +  N   W A++G  +
Sbjct: 246 EIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYA-ERVFNRIYSKNIVAWNAMIGGMQ 302


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/741 (34%), Positives = 425/741 (57%), Gaps = 8/741 (1%)

Query: 35  SLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP 94
           SL++ +   G   ++   F  +        N +   +   D   +A+  ++ M+ +G RP
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           + F+   ++  CA +G    GR  H   IKLG  +D+++AN+LV +YAK+G + DA  VF
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELK 213
             +   DIVSWN ++ G V +     AL  F++M  + ++  +     +AL AC      
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            LGR++H   I+  ++ D  VG  LVDMY KCG++  A  +F  MP + ++ WN +I G+
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
             N   ++A   F  M  +G   +  T   +L + A  ++    + VHA  V+  F    
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHV 358

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            +  +L++ YGK G VE + KIF + +   LV+  +MI AY    + +EA+ L+LE+ ++
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQ 418

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + PD F  ++++ A   L +  Q KQ+H +I+K G+   T   N++++MYA+CG+I  +
Sbjct: 419 PLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVAS 478

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F ++P + ++SW+ +I G A HG+GK AL+MF +M   G+ PN  T VSVL AC+ +
Sbjct: 479 REIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVS 538

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           GL AE    F SM++++G+ P  EHY CM D+LGRAG+ +E +  ++ MP    + +WG+
Sbjct: 539 GLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGS 598

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
           LL A+R   ++++ ++AAE +F +E   +  +V+LS++YA AG W++V ++R  MK+  L
Sbjct: 599 LLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGL 658

Query: 634 KKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVE 692
           ++    S +E+ +K  +F  GD SH +S++I+    E SD+L++  G      ++L D +
Sbjct: 659 RRTEARSLVELNNKECSFVNGDMSHPQSEKIH----EFSDILSRNIGEDLDSSSNLRDSD 714

Query: 693 E--SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
              S    L   HS +LAVAFGLI++  G+ + VKKN+R+C  CH + + ISK   R+I+
Sbjct: 715 PFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIV 774

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           V D   +H F +GSC CG YW
Sbjct: 775 VGDTKIYHIFSDGSCCCGDYW 795



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 243/489 (49%), Gaps = 5/489 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C     L  G   H  V+  G  +D + ANSLV +YAK G   D+ R+FD +P R 
Sbjct: 126 VLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARD 185

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VSWN++   YV       A+  F+EM  +  +  +   + + + AC       LGR+IH
Sbjct: 186 IVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIH 245

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           GY+I+ G + D+    +LVDMY K GN+  A  VF  +    +V+WN +I G  L+E   
Sbjct: 246 GYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPV 305

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A   F QM+       + T  + L ACA  E    GR +H  +++       ++   L+
Sbjct: 306 DAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALL 365

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY K G ++ +  IF  + +K L++WN +I+ ++      EA +LF  +  + +  D  
Sbjct: 366 EMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYF 425

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T++TV+ +     +I  CKQ+H+  VK  +     I+N+++  Y +CG++  + +IF + 
Sbjct: 426 TMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKM 485

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG- 418
              D+++  ++I  YA  G G+ AL+++ EM+   + P+     S+L AC+      +G 
Sbjct: 486 PGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGW 545

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K+ +    ++G +        + ++  + G + +  R    +P   I   S + G L   
Sbjct: 546 KEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMP---IAPTSRIWGSLLTA 602

Query: 479 GRGKEALQM 487
            R K  + +
Sbjct: 603 SRNKNDIDI 611


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/531 (42%), Positives = 343/531 (64%), Gaps = 1/531 (0%)

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++ +AR +F  MP +++++W  +I+G+ QN    EA  L P M R     +  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++LK+  +     + +Q+HAL+VK  ++ D Y+ ++L+D Y +C  ++ A+ +F    
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + + V+  ++I  +A+   GE  L  + EMQ        F  SS+ +A A + A EQG+ 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH H+IK G     F GN+++ MYAK GS+ DA + F  +  R +V+W+ M+  LAQ+G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           GKEA+  F ++ + G+  N IT +SVL AC+H GLV E KH+F+ M K + +QP  +HY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYV 299

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
             +D+LGRAG  +EA+  V  MP +  A+VWGALLGA R++KN ++GQ+AA+ +F ++P+
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +   VLL NIYAS G W++ A+VR+ MK   +KKEP  SW+++++ V+ F   D +H +
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           S +IY   +E++  + KAGYVP     L  + E E+E  L +HSEK+A+AF LI  P GA
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +IR+ KN+RIC DCH++F+++SK+  REI+VRD NRFHHF  GSCSCG YW
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 200/427 (46%), Gaps = 35/427 (8%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY KCG   D+R +FD +P R VVSW  L + Y       EA+    +M+ +  RPN F+
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
            +S++ A    G   +G ++H  ++K  +D D++  +AL+DMYA+   ++ A+ VF  + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             + VSWNA+IAG       +  L  F +M+ +      FTY+S   A A +   E GR 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  LIK   K    VG  ++ MYAK GSM +AR +F  M +++L+ WN +++   Q G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             EA + F  + + G+  +Q T  +VL + +    +   K    +         DY V  
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDM-------MKDYNVQP 293

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
            ID Y                S VDL+          + GL +EAL    +M    + P 
Sbjct: 294 EIDHY---------------VSFVDLL---------GRAGLLKEALIFVFKM---PMEPT 326

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           + V  +LL AC      + G+    H+ +     DT     L N+YA  G  +DA R   
Sbjct: 327 AAVWGALLGACRMHKNAKMGQYAADHVFELD-PDDTGPPVLLYNIYASTGKWNDAARVRK 385

Query: 459 EIPDRGI 465
            +   G+
Sbjct: 386 MMKATGV 392



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 169/359 (47%), Gaps = 6/359 (1%)

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MY K G + DA  VF  +   D+VSW  +IAG   +     A+ L   M  +   PN FT
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +TS LKA        +G Q+H   +K     D  VG  L+DMYA+C  MD A M+F  + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            KN ++WN +I+G  +          F  M R G G    T S++  + A   A+   + 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VHA  +K+  +   ++ N+++  Y K G + DA K+F      DLV   +M+TA AQ+GL
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G+EA+  + E++   I  +     S+L AC++    ++GK     +  +    +     S
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            V++  + G + +A     ++P     + W A++G    H   K      GQ   D V 
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK-----MGQYAADHVF 354



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +     +G Q+H + V   +D D +V ++L+ MYA+C     +  +FD +  ++
Sbjct: 64  LLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKN 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L + +      E  +  F EM  +G     F+ SSM +A A  G    GR +H 
Sbjct: 124 EVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHA 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     F  N ++ MYAK G++ DA  VF  ++  D+V+WN ++     +     
Sbjct: 184 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKE 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++++   I  N  T+ S L AC+   L + G+     +    ++ +    V  VD
Sbjct: 244 AVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVD 303

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           +  + G + EA +    MP E     W  ++
Sbjct: 304 LLGRAGLLKEALIFVFKMPMEPTAAVWGALL 334


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/535 (43%), Positives = 344/535 (64%), Gaps = 42/535 (7%)

Query: 241 MYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYREGVGF 296
           MYAKC   GS+D++R +F  MPE N+++W  +I+ ++Q+G  D EA  LF          
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF---------- 50

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
                               CK + A        S + + NSLI  Y + G +EDA K F
Sbjct: 51  --------------------CKMISA--------SVNCVGNSLISMYARSGRMEDARKAF 82

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 +LV+  +++  YA+    EEA  L+ E+ D  I   +F  +SLL+  A++ A  
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G+Q+H  ++K G+ S+    N+L++MY++CG+I+ A + F+E+ DR ++SW++MI G A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           +HG    AL+MF +MLE G  PN IT V+VL AC+H G+++E + HF SM K+ GI P  
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYACM+D+LGR+G   EAME +++MP  A+A VW  LLGA R++ N E+G+HAAEM+  
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            EP+  + ++LLSN++ASAG W +V K+R+ MK+  L KE G SWIEV+++V+ F VG+ 
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH ++ +IY +LD+++  + + GY+P  +  LHD+EE +KEQ L+ HSEK+AVAFGLI+T
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
                IR+ KNLR+C DCHT+ ++IS    REI+VRD NRFHH +NG CSC  YW
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 178/364 (48%), Gaps = 47/364 (12%)

Query: 140 MYAKV---GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH-EHNDWALKLFQQMKSSEINP 195
           MYAK    G+++D+  VF+ +   +++SW A+I   V   E +  A++LF +M S+ +N 
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
                                                 VG  L+ MYA+ G M++AR  F
Sbjct: 60  -------------------------------------CVGNSLISMYARSGRMEDARKAF 82

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
            ++ EKNL+++N ++ G+ +N    EA  LF  +   G+G    T +++L   AS  A+G
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             +Q+H   +K  ++S+  I N+LI  Y +CG++E A ++F E    ++++ TSMIT +A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDT 434
           + G    AL+++ +M +    P+     ++L+AC+++    +G++    + K  G +   
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGR---GKEALQMFGQ 490
                +V++  + G + +A    + +P     + W  ++G    HG    G+ A +M  +
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 491 MLED 494
              D
Sbjct: 323 QEPD 326



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 126/230 (54%), Gaps = 3/230 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           V NSL+ MYA+ G   D+R+ FD + E+++VS+N++   Y      EEA   F E+  +G
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           I  + F+ +S+++  A  G    G +IHG  +K GY S+    NAL+ MY++ GN+E A 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF ++E  +++SW ++I G   H     AL++F +M  +   PN  TY + L AC+ + 
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240

Query: 212 LKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP 259
           +   G++   S+ K E    P +     +VD+  + G + EA    + MP
Sbjct: 241 MISEGQKHFNSMYK-EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 289



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 193/434 (44%), Gaps = 80/434 (18%)

Query: 39  MYAKC---GNFIDSRRLFDAIPERSVVSWNSLFSCYVH---CDFLEEAVCFFKEMVLSGI 92
           MYAKC   G+  DSR++F+ +PE +V+SW ++ + YV    CD  +EA+  F +M+    
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECD--KEAIELFCKMI---- 54

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
                  S+ +N C G                          N+L+ MYA+ G +EDA  
Sbjct: 55  -------SASVN-CVG--------------------------NSLISMYARSGRMEDARK 80

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
            F  +   ++VS+NA++ G   +  ++ A  LF ++  + I  + FT+ S L   A +  
Sbjct: 81  AFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA 140

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              G Q+H  L+K   KS+  +   L+ MY++CG+++ A  +F+ M ++N+I+W  +I+G
Sbjct: 141 MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITG 200

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
             ++G    A  +F  M   G   ++ T   VL +         C  V  +S     E  
Sbjct: 201 FAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA---------CSHVGMIS-----EGQ 246

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            +  NS+   +G    +E               AC  M+    + GL  EA++    M  
Sbjct: 247 KHF-NSMYKEHGIVPRMEH-------------YAC--MVDLLGRSGLLVEAMEFINSM-- 288

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +  D+ V  +LL AC      E G+     I++     D  A   L N++A  G   D
Sbjct: 289 -PLMADALVWRTLLGACRVHGNTELGRHAAEMILE-QEPDDPAAYILLSNLHASAGQWKD 346

Query: 453 ADRAFSEIPDRGIV 466
             +    + +R ++
Sbjct: 347 VVKIRKSMKERNLI 360



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 114/228 (50%), Gaps = 14/228 (6%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G Q+HG ++  G+ S++ + N+L+ MY++CGN   + ++F+ + +R+V+SW S+ + +  
Sbjct: 144 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 203

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IHGYSIKLGYDSDMF 132
             F   A+  F +M+ +G +PNE +  ++++AC+  G    G+K  +    + G    M 
Sbjct: 204 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRME 263

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
               +VD+  + G L +A+     +    D + W  ++  C +H + +      + +   
Sbjct: 264 HYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ 323

Query: 192 EI-NPNMFTYTSALKACAG-----------MELKELGRQLHCSLIKME 227
           E  +P  +   S L A AG           M+ + L ++  CS I++E
Sbjct: 324 EPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 371


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/581 (40%), Positives = 353/581 (60%), Gaps = 7/581 (1%)

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I P+ FT+   +KAC+ +   E G ++H  ++K   +S   +   L+ MY KC   + +R
Sbjct: 6   IQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP+KN ++W+ +I   LQ+    E  SLF  M  EG    + +   +L ++A  +
Sbjct: 66  QVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEG---SRPSRGAILNAMACVR 122

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           +      V+ + V+   + D  + ++    + +CG VE A K+F    + DLV   + I 
Sbjct: 123 SHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIE 182

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AY +  +  EAL L  +M  + I PD+     ++ AC+ L++++    VH  II  GF  
Sbjct: 183 AYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVH-GIITTGFFY 241

Query: 433 DTFAG--NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           +       +L+++Y KCGS+  A + F  + +R I++WSAMI G   HG G+EAL +F Q
Sbjct: 242 NQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQ 301

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M +  V P+HIT VS+L AC+H+GLVAE    F SM + FG+ P  EHYACM+DILGRAG
Sbjct: 302 M-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAG 360

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           K  EA + ++ MP + NA+VWGALLGA RI+ NV++ +  A  LF ++P  +  +V+L N
Sbjct: 361 KLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYN 420

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
           IY   G       +R  MK+  +KK  G S IE+K+K+Y F  GDRSH ++  IY++L+ 
Sbjct: 421 IYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELER 480

Query: 671 VSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRI 730
           + D + + GY P +   LHDV+E  KE +LY HSEKLA+ FGL+   PG+ IR++KNLR+
Sbjct: 481 LMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRV 540

Query: 731 CVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           C DCHT+ +FISK+  REI+VRD +RFHHF+NG+CSC  YW
Sbjct: 541 CGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+  GI+P+ F+   +I AC+       G +IH   +K GY S +F +N+L+ MY K   
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
            E +  VF ++   + VSW+A+I  C+  +       LF+QM S    P   +  + L A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNA 117

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
            A +   E    ++  +++  +  D  V      M+A+CG ++ AR +F  +  K+L+ W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
              I  +++    +EA  L   M  +G+  D  TL  V+++ ++  +  +   VH + + 
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-IT 236

Query: 327 TAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           T F  +  +    +LID Y KCG +  A K+F      +++  ++MI+ Y   G G EAL
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREAL 296

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNM 443
            L+ +M+   + PD     S+L+AC++     +G +    + + FG          +V++
Sbjct: 297 NLFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355

Query: 444 YAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
             + G +D+A      +P R     W A++G    H
Sbjct: 356 LGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 162/309 (52%), Gaps = 7/309 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KAC+  +    G+++H  VV  G+ S  F++NSL+ MY KC  +  SR++FD +P+++
Sbjct: 16  IIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW+++    +  D  +E    F++M+  G RP   S  +++NA A          ++ 
Sbjct: 76  AVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNAMACVRSHEEADDVYR 132

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G D D    +A   M+A+ G +E A  +F  I   D+V+W   I   V  +    
Sbjct: 133 VVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLE 192

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV--GL 238
           AL L +QM    I P+  T    ++AC+ +   +L   +H  +I      + ++ V   L
Sbjct: 193 ALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVH-GIITTGFFYNQLLAVETAL 251

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D+Y KCGS+  AR +F  M E+N+I W+ +ISG+  +G   EA +LF  M +  V  D 
Sbjct: 252 IDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDH 310

Query: 299 TTLSTVLKS 307
            T  ++L +
Sbjct: 311 ITFVSILSA 319


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/648 (37%), Positives = 392/648 (60%), Gaps = 7/648 (1%)

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           L + S+      +++++ +   L++AV     I  P    ++ +IA C+ H   +   ++
Sbjct: 26  LSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRV 85

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYA 243
               K+S   P +      +   A     + G  +   ++  EI    +     ++  YA
Sbjct: 86  HAHTKASNFIPGIVISNRLIHMYA-----KCGSLVDAQMLFDEIPQKDLCSWNTMISGYA 140

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLS 302
             G +++AR +F  MP ++  +WN VISG++  G  MEA  LF  M   E    +  TLS
Sbjct: 141 NVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLS 200

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           + L + A+  ++   K++H   +++  E D+ +  +L+D YGKCG + +A  IF + +  
Sbjct: 201 SALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADK 260

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           D+V+ T+MI    + G  +E   L+ ++    + P+ +  + +LNACA+L+A + GK+VH
Sbjct: 261 DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVH 320

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
            ++ + G+   +FA ++LV++Y+KCG+ + A R F+++P   +VSW+++I G AQ+G+  
Sbjct: 321 GYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPD 380

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
            ALQ F  +L  G  P+ IT V VL AC HAGLV     +F S+++K G+    +HYAC+
Sbjct: 381 MALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACV 440

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           ID+L R+G+F+EA  ++D MP + +  +W +LLG  RI+ N+E+ + AA+ LF +EPE  
Sbjct: 441 IDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENP 500

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
           +T++ LSNIYA+AG+W    KVR  M +  + K+PG SWIE+K +V+ F VGD SH +  
Sbjct: 501 ATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIS 560

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           +I+  L E+S  + + GYV      LHDVEE +KEQ +++HSEKLAVAFG+I+T PG  I
Sbjct: 561 DIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPI 620

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           +V KNLR CVDCH + ++ISKIV R+IIVRD NRFH F +GSCSC  Y
Sbjct: 621 KVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 212/459 (46%), Gaps = 51/459 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   + L LG +VH     + F     ++N L+ MYAKCG+ +D++ LFD IP++ 
Sbjct: 69  LIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKD 128

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSG----------------IRP 94
           + SWN++ S Y +   +E+A   F EM          V+SG                ++ 
Sbjct: 129 LCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQE 188

Query: 95  NEFSLSSMINACAGSGDSLL------GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           NE S  +M    +    +        G++IHGY I+ G + D     AL+D+Y K G+L 
Sbjct: 189 NESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLN 248

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  +   DIVSW  +I  C           LF+ +  S + PN +T+   L ACA
Sbjct: 249 EARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACA 308

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +  +++G+++H  + ++           LV +Y+KCG+ + AR +F+ MP  +L++W  
Sbjct: 309 DLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTS 368

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV--ASFQAIGV-----CKQVH 321
           +I G+ QNG    A   F  + R G   D+ T   VL +   A    IG+      K+ H
Sbjct: 369 LIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKH 428

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITA---YAQF 377
            L V TA   D Y    +ID   + G  ++A  I        D     S++     +   
Sbjct: 429 GL-VHTA---DHYAC--VIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNI 482

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            L E A K   E++    NP +++  S + A A L   E
Sbjct: 483 ELAERAAKALFELEPE--NPATYITLSNIYANAGLWTEE 519



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 216/439 (49%), Gaps = 42/439 (9%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EAV +   +     +P+    S++I AC       LG+++H ++    +   +  +N 
Sbjct: 48  LKEAVDYLHRIP----QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNR 103

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC---------------VLHEHN-DW 180
           L+ MYAK G+L DA  +F +I   D+ SWN +I+G                + H  N  W
Sbjct: 104 LIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSW 163

Query: 181 ---------------ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLI 224
                          AL LF+ M+ +E  N NMFT +SAL A A +     G+++H  LI
Sbjct: 164 NAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLI 223

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
           +  ++ D +V   L+D+Y KCGS++EAR IF  M +K++++W  +I    ++G   E  S
Sbjct: 224 RSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFS 283

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           LF  +   GV  ++ T + VL + A   A  + K+VH    +  ++   +  ++L+  Y 
Sbjct: 284 LFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYS 343

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           KCG+ E A ++F +    DLV+ TS+I  YAQ G  + AL+ +  +      PD      
Sbjct: 344 KCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVG 403

Query: 405 LLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI--- 460
           +L+AC +    + G +  H    K G +        ++++ A+ G   +A+     +   
Sbjct: 404 VLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMK 463

Query: 461 PDRGIVSWSAMIGGLAQHG 479
           PD+ +  W++++GG   HG
Sbjct: 464 PDKFL--WASLLGGCRIHG 480


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/578 (40%), Positives = 367/578 (63%), Gaps = 3/578 (0%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           ++ S I  +   Y + LK C   +L   GR +H  +++   + D ++G  L++MYAKCGS
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           ++EAR +F  MP+++ + W  +ISG+ Q+    +A   F  M R G   ++ TLS+V+K+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 308 VASFQAIGVC-KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            A+ +  G C  Q+H   VK  F+S+ ++ ++L+D Y + G ++DA  +F    + + V+
Sbjct: 171 AAA-ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             ++I  +A+    E+AL+L+  M      P  F  +SL  AC++    EQGK VH ++I
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G     FAGN+L++MYAK GSI DA + F  +  R +VSW++++   AQHG GKEA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
            F +M   G+ PN I+ +SVL AC+H+GL+ E  H++E M KK GI P   HY  ++D+L
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLL 408

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG    A+  ++ MP +  A++W ALL A R++KN E+G +AAE +F ++P+    HV
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           +L NIYAS G W++ A+VR+ MK++ +KKEP  SW+E+++ ++ F   D  H + +EI  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           K +EV   + + GYVP     +  V++ E+E  L +HSEK+A+AF L+ TPPG+TI +KK
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
           N+R+C DCHT+ +  SK+V REIIVRD NRFHHF++ S
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 260/558 (46%), Gaps = 59/558 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK CT  K L  G  VH  ++ + F  D  + N+L+ MYAKCG+  ++R++F+ +P+R 
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W +L S Y   D   +A+ FF +M+  G  PNEF+LSS+I A A       G ++HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G+DS++   +AL+D+Y + G ++DA  VF  +E  + VSWNA+IAG       + 
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ M      P+ F+Y S   AC+     E G+ +H  +IK   K     G  L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS+ +AR IF  + ++++++WN +++ + Q+G   EA   F  M R G+  ++ +
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + +    +      + L  K     + +   +++D  G+ G +  A++  +E  
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                                             I P + +  +LLNAC      E G  
Sbjct: 426 ----------------------------------IEPTAAIWKALLNACRMHKNTELGAY 451

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGL 475
              H+ +     D      L N+YA  G  +DA R   ++ + G+      SW  +    
Sbjct: 452 AAEHVFELD-PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI---- 506

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLV----SVLCACNHAGLVAEAKH---HFESMEK 528
                 + A+ MF  +  D   P    +      VL      G V +  H   H +  E+
Sbjct: 507 ------ENAIHMF--VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQER 558

Query: 529 KFGIQPMQEHYACMIDIL 546
           +  +Q   E  A    +L
Sbjct: 559 EVNLQYHSEKIALAFALL 576



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 1/380 (0%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           ++++  C      + GR +H + ++  +  D+   N L++MYAK G+LE+A  VF+ +  
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D V+W  +I+G   H+    AL  F QM     +PN FT +S +KA A       G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H   +K    S+  VG  L+D+Y + G MD+A+++F  +  +N ++WN +I+GH +  G 
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            +A  LF  M R+G      + +++  + +S   +   K VHA  +K+  +   +  N+L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y K G + DA KIF   +  D+V+  S++TAYAQ G G+EA+  + EM+   I P+ 
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               S+L AC++    ++G   +  + K G + + +   ++V++  + G ++ A R   E
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423

Query: 460 IPDRGIVS-WSAMIGGLAQH 478
           +P     + W A++     H
Sbjct: 424 MPIEPTAAIWKALLNACRMH 443



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 11/196 (5%)

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +++   I  D    ++LL  C       QG+ VH HI++  F  D   GN+L+NMYAKCG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           S+++A + F ++P R  V+W+ +I G +QH R  +AL  F QML  G  PN  TL SV+ 
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 509 ACNHAGLVAEAK----HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           A       AE +    H       K G        + ++D+  R G   +A  + D +  
Sbjct: 170 AA-----AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224

Query: 565 QANASVWGALL-GAAR 579
           + + S W AL+ G AR
Sbjct: 225 RNDVS-WNALIAGHAR 239


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/662 (38%), Positives = 378/662 (57%), Gaps = 6/662 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           RK+H        D + F  N LVD Y+K G+L  A   F  I   +  SWN ++A    +
Sbjct: 52  RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            H   A  LF  M S  + PN  T ++AL AC       LGR+L+  +    ++ D  V 
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MY +C  ++EA   F   PEK+++ W  +IS +  N     A  L   M  EG+ 
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVK 354
               T  ++L + AS   +      H  +     +    +V  +L++ YGKCG V+DA +
Sbjct: 232 LGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARR 291

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +         V+ T+MI AYAQ G   EA+ L+  M      P      S++++CA L  
Sbjct: 292 VLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGT 351

Query: 415 YEQGKQVHVHIIKF-GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP--DRGIVSWSAM 471
              GK++H  I     F       N+++ MY KCG+++ A   F  +P   R +V+W+AM
Sbjct: 352 LSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAM 411

Query: 472 IGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           I   AQ+G G+EA+++F +ML DG   PN +T +SVLCAC+H G + +A  HF SM   F
Sbjct: 412 IRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDF 471

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELV-DTMPFQANASVWGALLGAARIYKNVEVGQH 589
           G+ P  +HY C++D+LGRAG+  EA +L+     F+A+   W A L A ++  ++E  Q 
Sbjct: 472 GVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR 531

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           AA+ +  +EPE  +  VLLSN+YA+ G   +VA++R  MK + +KK  G SWIE+ ++V+
Sbjct: 532 AAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVH 591

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F V D SH R  EIY++L+ +   + +AGYVP  +  L DV+E +K QLL +HSE+LA+
Sbjct: 592 EFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAM 651

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           A G+I+TPPG T+RV KNLR+C DCH + +FIS+IV R+IIVRD +RFHHF++G CSCG 
Sbjct: 652 ALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGD 711

Query: 770 YW 771
           YW
Sbjct: 712 YW 713



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 255/535 (47%), Gaps = 27/535 (5%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H  +     D + F+ N LV  Y+K G+   ++  F  I   +  SWN L + Y    
Sbjct: 53  KLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNG 112

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
               A   F  M   G+RPN  +LS+ + AC  + +  LGRK++        + D    +
Sbjct: 113 HPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVES 172

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ MY +   +E+A   F      D+V W A+I+    +     AL+L ++M    I  
Sbjct: 173 SLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKL 232

Query: 196 NMFTYTSALKACAG-MELKELGRQLHCSLIKMEI-KSDPIVGVGLVDMYAKCGSMDEARM 253
            + TY S L ACA  M+L+  G   H     + + +S  +V   LV++Y KCG +D+AR 
Sbjct: 233 GLPTYVSLLDACASTMDLRN-GVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARR 291

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +   MP +  ++W  +I+ + QNG   EA +LF  M  EG      TL +V+ S A    
Sbjct: 292 VLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGT 351

Query: 314 IGVCKQVHA-LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSM 370
           + + K++HA +    +F     ++N++I  YGKCG++E A ++F+        +V  T+M
Sbjct: 352 LSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAM 411

Query: 371 ITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           I AYAQ G+GEEA++L+ EM  D    P+     S+L AC++L   EQ  +       F 
Sbjct: 412 IRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE------HFC 465

Query: 430 FMSDTF----AGN---SLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHG- 479
            M   F    AG+    LV++  + G + +A++      D    +V W A +     +G 
Sbjct: 466 SMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGD 525

Query: 480 --RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME-KKFG 531
             R + A +   + LE   +   + L +V  A      VA  ++  +S   KKF 
Sbjct: 526 LERSQRAAKRVSE-LEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFA 579



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 215/462 (46%), Gaps = 35/462 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L ACT+ ++L LG +++ ++     + D  V +SL+ MY +C    ++ R FD  PE+ V
Sbjct: 140 LLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDV 199

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V W ++ S Y H      A+   + M L GI+    +  S+++ACA + D   G   H  
Sbjct: 200 VCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQR 259

Query: 122 SIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  +G D S    A  LV++Y K G ++DA  V   +     VSW A+IA    + +   
Sbjct: 260 AAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAE 319

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL-- 238
           A+ LFQ M      P+  T  S + +CA +    LG+++H       I+S P     L  
Sbjct: 320 AINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHA-----RIRSSPSFSQSLML 374

Query: 239 ----VDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
               + MY KCG+++ AR +F  +P   ++++ W  +I  + QNG   EA  LF  M  +
Sbjct: 375 LNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLID 434

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQV--HALSVKTAF----ESDDYIVNSLIDAYGKC 346
           G G +   + T L  + +   +G  +Q   H  S+   F      D Y    L+D  G+ 
Sbjct: 435 G-GTEPNRV-TFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCC--LVDLLGRA 490

Query: 347 GHVEDAVKIF--KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           G + +A K+    +    D+V   + ++A    G  E + +    +   E+ P++     
Sbjct: 491 GRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVS--ELEPENVAGRV 548

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSD---TFAGNSLVNM 443
           LL   +N+ A  +G++  V  I+    S     FAG S + +
Sbjct: 549 LL---SNVYA-AKGRRADVARIRNEMKSSGVKKFAGRSWIEI 586



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 145/296 (48%), Gaps = 23/296 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L AC S  DL  G+  H      G D S   VA +LV +Y KCG   D+RR+ DA+P R
Sbjct: 240 LLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVR 299

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + VSW ++ + Y       EA+  F+ M L G  P++ +L S++++CA  G   LG++IH
Sbjct: 300 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 359

Query: 120 GY-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWNAVIAGCVLHE 176
                   +   +   NA++ MY K GNLE A  VF+   +    +V+W A+I     + 
Sbjct: 360 ARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNG 419

Query: 177 HNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             + A++LFQ+M       PN  T+ S L AC+ +   E   +  CS+        P  G
Sbjct: 420 VGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSM-------GPDFG 472

Query: 236 VG--------LVDMYAKCGSMDEAR--MIFHLMPEKNLIAWNIVISGHLQNGGDME 281
           V         LVD+  + G + EA   ++ H   E +++ W   +S   Q  GD+E
Sbjct: 473 VPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSA-CQMNGDLE 527


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/813 (33%), Positives = 434/813 (53%), Gaps = 52/813 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L   +   D  L   VH  ++    + D  ++N+L+  Y K   F  + RLF ++P  +V
Sbjct: 71  LHVSSRSGDTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNV 129

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL-----GR 116
           VS+ +L S             F +    S + PNE++  +++ AC+    SLL     G 
Sbjct: 130 VSYTTLISFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACS----SLLHHFHFGL 185

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H  ++K  +    F ANALV +YAK  +   A+ +F  I   DI SWN +I+  +   
Sbjct: 186 QLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDS 245

Query: 177 HNDWALKLFQQMKSSE-INPNMFTYTSALKACAG-MELKELGRQLHCSLIKMEIKSDPIV 234
             D A +LF+ M++++    + FT +  L A A  ME    G+Q+H   +K+ +++D  V
Sbjct: 246 LYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLME----GQQVHAHAVKLGLETDLNV 301

Query: 235 GVGLVDMYAKCGSMDE-------------------------------ARMIFHLMPEKNL 263
           G GL+  Y+K G++D+                               A  +F  MPEKN 
Sbjct: 302 GNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNS 361

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           +++N V++G  +N    EA  LF  M  EG+     +L++V+ +        V KQVH  
Sbjct: 362 VSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGF 421

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAYAQFGLGE 381
           +VK  F S+ Y+  +L+D Y +CG + DA K+F   E      V  T+MI  YA+ G  E
Sbjct: 422 AVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPE 481

Query: 382 EALKLY-LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           EA+ L+ +   D ++  D    +S+L  C  +   + GKQ+H H+IK G   +   GN++
Sbjct: 482 EAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAV 541

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V+MY KCGS+DDA + F ++P   IV+W+ +I G   H +G  AL+++ +ML +G+ PN 
Sbjct: 542 VSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQ 601

Query: 501 ITLVSVLCACNHA--GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           +T V ++ A       LV + ++ F SM   + I+P   HYA  I +LG  G  QEA+E 
Sbjct: 602 VTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALET 661

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           ++ MPFQ +A VW  LL   R++KN  +G+ AA+ + A+EP+  ST +L+SN+Y+++G W
Sbjct: 662 INNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRW 721

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
           D    VR  M++   +K P  SWI  + K+ +F   DRSH + K+I   L+ +     K 
Sbjct: 722 DRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKI 781

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GY P     LH+VEE  K+  L+HHS KLA  +G++ T PG  IR+ KN+ +C DCH   
Sbjct: 782 GYEPDTSFVLHEVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFL 841

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++ S +  R+I +RD + FH F NG CSC   W
Sbjct: 842 KYASIVTKRDIFLRDSSGFHCFSNGQCSCKDCW 874



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 269/568 (47%), Gaps = 53/568 (9%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P   SL   ++  + SGD+ L + +H   +K   + D   +NAL+  Y K+     A+
Sbjct: 60  LPPESHSLLHALHVSSRSGDTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHAL 118

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAG- 209
            +F  +  P++VS+  +I+    H  +  AL LF +M + S + PN +TY + L AC+  
Sbjct: 119 RLFLSLPSPNVVSYTTLISFLSKHRQHH-ALHLFLRMTTRSHLPPNEYTYVAVLTACSSL 177

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +     G QLH + +K      P V   LV +YAK  S   A  +F+ +P +++ +WN +
Sbjct: 178 LHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTI 237

Query: 270 ISGHLQNGGDMEAASLFPWMY-REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           IS  LQ+     A  LF  M   +    D  TLS +L + AS       +QVHA +VK  
Sbjct: 238 ISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLME---GQQVHAHAVKLG 294

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL--------- 379
            E+D  + N LI  Y K G+V+D   +F+     D++  T M+TAY +FGL         
Sbjct: 295 LETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFD 354

Query: 380 ----------------------GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                                 G EA++L++ M +  +    F  +S+++AC  L  Y+ 
Sbjct: 355 EMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKV 414

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF--SEIPDRGIVSWSAMIGGL 475
            KQVH   +KFGF S+ +   +L++MY +CG + DA + F   E+ +   V W+AMI G 
Sbjct: 415 SKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGY 474

Query: 476 AQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
           A++G+ +EA+ +F     DG V+ + +   S+L  C   G +   K        K G+  
Sbjct: 475 ARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGK-QIHCHVIKCGLGF 533

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             E    ++ +  + G   +AM++   MP   +   W  L+    +++    G  A E+ 
Sbjct: 534 NLEVGNAVVSMYFKCGSVDDAMKVFGDMPC-TDIVTWNTLISGNLMHRQ---GDRALEIW 589

Query: 595 F-----AIEPEKSSTHVLLSNIYASAGM 617
                  I+P +  T VL+ + Y    +
Sbjct: 590 VEMLGEGIKPNQ-VTFVLIISAYRQTNL 616



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 7/279 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD--AIPE 58
           V+ AC    D  +  QVHG  V  GF S+ +V  +L+ MY +CG  +D+ ++F    + E
Sbjct: 402 VVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEE 461

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRK 117
            S V W ++   Y      EEA+  F      G +  +E + +SM+  C   G   +G++
Sbjct: 462 FSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQ 521

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH + IK G   ++   NA+V MY K G+++DA+ VF D+   DIV+WN +I+G ++H  
Sbjct: 522 IHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQ 581

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKM-EIKSDPIV 234
            D AL+++ +M    I PN  T+   + A     + L +  R L  S+  + +I+     
Sbjct: 582 GDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRH 641

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
               + +    G + EA    + MP + + + W +++ G
Sbjct: 642 YASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDG 680


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/660 (37%), Positives = 391/660 (59%), Gaps = 40/660 (6%)

Query: 116 RKIHGYSIKLGYDSDMFSANAL----VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           +K+H    K+  D D+ S  +L    +  YA  G       +F +I   ++V +N +I  
Sbjct: 55  KKLHS---KICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRS 111

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
            V +     AL +F+ M    I+P+ +TY   LKA +G E   +G Q+H +++++ +  +
Sbjct: 112 YVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLN 171

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             VG GL+ MY KCG + EA  +   MP +++++WN +++G  +NG   +A  +   M  
Sbjct: 172 VFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL 231

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            G+  D  T++++L +V                            N+ +D      +V  
Sbjct: 232 LGLKPDAGTMASLLPAVT---------------------------NTCLD------NVSF 258

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
             ++F + +   LV+   MI  Y    +  EA+ ++L+M+D  ++PD+   +S+L AC +
Sbjct: 259 VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGD 318

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           LSA   G+++H ++++     +    N+L++MYAKCG ++ A   F ++  R +VSW++M
Sbjct: 319 LSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSM 378

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I     +G+G++A+ +F +M + G+ P+ I  VSVL AC+HAGL+ E +++F+ M ++  
Sbjct: 379 ISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECK 438

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P  EH+ CM+D+LGRAG+  EA   +  MP + N  VWGALL A R+Y N+ +G  AA
Sbjct: 439 IVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAA 498

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           + LF + PE+S  +VLLSNIYA AG W++V  VR  MK   +KK PG+S  E+ ++V+TF
Sbjct: 499 DQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTF 558

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
             GD+SH +SK+IY +LD     + +AGYVP  ++ LHDVEE +KE  L  HSEKLA+AF
Sbjct: 559 LAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAF 618

Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ++ T PG+ IR+ KNLR+C DCH + + ISKIV REI +RD NRFHHF NG CSCG YW
Sbjct: 619 AILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 222/437 (50%), Gaps = 38/437 (8%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM 87
           S+  +   L+  YA CG    +R +FD IP+++VV +N +   YV+     +A+  FK M
Sbjct: 69  SNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM 128

Query: 88  VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
              GI P+ ++   ++ A +GS D  +G +IH   +++G D ++F  N L+ MY K G L
Sbjct: 129 AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCL 188

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
            +A  V   +   D+VSWN+++AGC  +   D AL++ ++M+   + P+  T  S L A 
Sbjct: 189 VEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV 248

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
               L  +      S +K              +M+ K             +  K+L++WN
Sbjct: 249 TNTCLDNV------SFVK--------------EMFMK-------------LANKSLVSWN 275

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           ++I+ ++ N    EA  +F  M    V  D  ++++VL +     A+ + +++H   V+ 
Sbjct: 276 VMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK 335

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             + +  + N+LID Y KCG +E A ++F +    D+V+ TSMI+AY   G G +A+ L+
Sbjct: 336 RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLF 395

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGK---QVHVHIIKFGFMSDTFAGNSLVNMY 444
             MQD  +NPDS    S+L+AC++    ++G+   ++     K     + F    +V++ 
Sbjct: 396 SRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLL 453

Query: 445 AKCGSIDDADRAFSEIP 461
            + G +D+A     ++P
Sbjct: 454 GRAGQVDEAYGFIKQMP 470



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 38/361 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKA +  +DL++G+Q+H  VV  G D + FV N L+ MY KCG  +++ R+ D +P R 
Sbjct: 143 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRD 202

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL +        ++A+   KEM L G++P+  +++S++ A               
Sbjct: 203 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV-------------- 248

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                         N  +D      N+     +F  + +  +VSWN +IA  + +     
Sbjct: 249 -------------TNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 289

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ +F QM+   ++P+  +  S L AC  +    LGR++H  +++  ++ + ++   L+D
Sbjct: 290 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALID 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++ AR +F  M  +++++W  +IS +  NG   +A SLF  M   G+  D   
Sbjct: 350 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 409

Query: 301 LSTVLKSVASFQAIGVCKQVHAL---SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             +VL + +    +   +    L     K     + ++   ++D  G+ G V++A    K
Sbjct: 410 FVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIK 467

Query: 358 E 358
           +
Sbjct: 468 Q 468


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/534 (42%), Positives = 351/534 (65%), Gaps = 5/534 (0%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++MY K G + +A+ +F  MP++N+++W  +IS +     + +A      M REGV  +
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S+VL++      +   +Q+H   +K   +SD ++ ++LID Y + G +E+A+++F 
Sbjct: 66  MFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    DLV  +S+I  +AQ   G+EAL+L+  M+           +S+L AC  L+  E 
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+QVHVH++K+    D    N+L++MY KCGS++DA+  F  + ++ ++SWS MI GLAQ
Sbjct: 183 GRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           +G  KEAL++F  M   G+ PN++T+V VL AC+HAGLV E  ++F SM++ FGI P +E
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CMID+LGRAG+  EA++L++ M  + +A  W ALL A R+++NV+V  HAA+ +  +
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRL 360

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +P+ + T+VLLSNIYA+   W++VA+VRR M +  +KKEPG SWIEV  +++ F +GDRS
Sbjct: 361 DPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRS 420

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H + +EI  +L+++   L   GYVP     L D+E  + +  L +HSEKLA+ FGL++ P
Sbjct: 421 HPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLP 480

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            G TIR++KNLRIC DCH   + ++K+  R I++RD  R+HHF++G CSCG +W
Sbjct: 481 RGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 226/438 (51%), Gaps = 45/438 (10%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+ N L+ MY K G   D++ +FD +P+R+VVSW ++ S Y      ++A+ F   M+  
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+RPN F+ SS++ AC G  +    R++H   IK+G DSD+F  +AL+D+Y++ G LE+A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           + VF ++   D+V W+++IAG   +   D AL+LF++MK +       T TS L+AC G+
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
            L ELGRQ+H  ++K +   D I+   L+DMY KCGS+++A  +F  M EK++I+W+ +I
Sbjct: 178 ALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           +G  QNG   EA  LF  M   G+  +  T+  VL + +           HA  V+    
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS-----------HAGLVEEGL- 283

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
              Y  +S+ + +G        +   +E           MI    + G   EA+ L  EM
Sbjct: 284 ---YYFHSMKELFG--------IDPGREHYG-------CMIDLLGRAGRLSEAVDLINEM 325

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV---NMYAKC 447
              E  PD+    +LLNAC       +   V +H  K     D     + V   N+YA  
Sbjct: 326 ---ECEPDAVTWRALLNAC----RVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANT 378

Query: 448 GSIDDADRAFSEIPDRGI 465
              +D       + +RGI
Sbjct: 379 QRWNDVAEVRRTMTNRGI 396



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 150/279 (53%), Gaps = 17/279 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC     LF   Q+H  ++  G DSD FV ++L+ +Y++ G   ++ R+FD +    
Sbjct: 72  VLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGD 128

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W+S+ + +      +EA+  FK M  +G    + +L+S++ AC G     LGR++H 
Sbjct: 129 LVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHV 188

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  YD D+   NAL+DMY K G+LEDA AVF  +   D++SW+ +IAG   + ++  
Sbjct: 189 HVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKE 246

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
           ALKLF+ MK   I PN  T    L AC+   L E G     S+ ++    DP    G   
Sbjct: 247 ALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKEL-FGIDP----GREH 301

Query: 238 ---LVDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISG 272
              ++D+  + G + EA  +I  +  E + + W  +++ 
Sbjct: 302 YGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           +++N LI+ Y K G + DA  +F +    ++V+ T+MI+AY+   L ++AL+  + M   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + P+ F  SS+L AC  L      +Q+H  IIK G  SD F  ++L+++Y++ G +++A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            R F E+    +V WS++I G AQ+  G EAL++F +M   G L    TL SVL AC   
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 514 GLV 516
            L+
Sbjct: 178 ALL 180



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 4/190 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ACT    L LG QVH  V    +D D  + N+L+ MY KCG+  D+  +F  + E+ 
Sbjct: 170 VLRACTGLALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKD 227

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           V+SW+++ +      + +EA+  F+ M + GI+PN  ++  ++ AC+ +G    G    H
Sbjct: 228 VISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFH 287

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
                 G D        ++D+  + G L +AV +  ++E  PD V+W A++  C +H + 
Sbjct: 288 SMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNV 347

Query: 179 DWALKLFQQM 188
           D A+   +Q+
Sbjct: 348 DVAIHAAKQI 357



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 5/143 (3%)

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F  N L+NMY K G + DA   F ++PDR +VSW+ MI   +      +AL+    ML +
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           GV PN  T  SVL AC+  GL    + H   +  K G+       + +ID+  R G+ + 
Sbjct: 61  GVRPNMFTYSSVLRACD--GLFNLRQLHCCII--KIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A+ + D M    +  VW +++  
Sbjct: 117 ALRVFDEM-VTGDLVVWSSIIAG 138


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/686 (36%), Positives = 388/686 (56%), Gaps = 46/686 (6%)

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-------EH 159
           A  GD   GR++     K     +++  N +V  YAK+G+ ++++ +FK +       + 
Sbjct: 145 ATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 160 P-------------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           P             D++SWN++I+G V +   +  L +++QM    I+ ++ T  S L  
Sbjct: 201 PESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA      LG+ +H   IK   +        L+DMY+KCG +D A  +F  M E+N+++W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I+G+ ++G    A  L   M +EGV  D   ++++L + A   ++   K VH     
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              ES+ ++ N+L+D Y KCG +E A  +F      D+++  +MI               
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG-------------- 426

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
                  E+ PDS   + +L ACA+LSA E+GK++H +I++ G+ SD    N+LV++Y K
Sbjct: 427 -------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG +  A   F  IP + +VSW+ MI G   HG G EA+  F +M + G+ P+ ++ +S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+H+GL+ +    F  M+  F I+P  EHYACM+D+L R G   +A E ++T+P   
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
           +A++WGALL   R Y ++E+ +  AE +F +EPE S  +VLL+NIYA A  W+ V ++R 
Sbjct: 600 DATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLRE 659

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDR-SHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
            +    L+K PG SWIE+K KV  F  G+  SH  SK I + L ++   + + G+ P  +
Sbjct: 660 KIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTK 719

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             L + +E +KE  L  HSEKLA+AFGL+  PP  TIRV KNLR+C DCH   +F+SK  
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI++RD NRFHHF++G CSC G+W
Sbjct: 780 RREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 173/611 (28%), Positives = 289/611 (47%), Gaps = 90/611 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K    G +VH I+       DE +   LV  YA CG+  + RR+FD + +++
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI---RPNE-------------FSLSSMIN 104
           V  WN + S Y      +E++C FK MV  GI   RP                S +SMI+
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224

Query: 105 A-----------------------------------CAGSGDSLLGRKIHGYSIKLGYDS 129
                                               CA SG   LG+ +H  +IK  ++ 
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            +  +N L+DMY+K G+L+ A+ VF+ +   ++VSW ++IAG      +D A+KL QQM+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +  ++   TS L ACA     + G+ +H  +    ++S+  V   L+DMYAKCGSM+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M  K++I+WN +I       G+++               D  T++ VL + A
Sbjct: 405 AANSVFSTMVVKDIISWNTMI-------GELKP--------------DSRTMACVLPACA 443

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  A+   K++H   ++  + SD ++ N+L+D Y KCG +  A  +F    + DLV+ T 
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI  Y   G G EA+  + EM+D  I PD     S+L AC++    EQG +   +I+K  
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIMKND 562

Query: 430 FMSDTFAGN--SLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEA 484
           F  +    +   +V++ ++ G++  A      +   PD  I  W A++ G   +   + A
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATI--WGALLCGCRNYHDIELA 620

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYAC- 541
            ++  ++ E  + P +     +L     A + AEA+     + + +K G Q ++++  C 
Sbjct: 621 EKVAERVFE--LEPENSGYYVLL-----ANIYAEAEKWEEVKRLREKIGKQGLRKNPGCS 673

Query: 542 MIDILGRAGKF 552
            I+I G+   F
Sbjct: 674 WIEIKGKVNLF 684


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 366/591 (61%), Gaps = 6/591 (1%)

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +K  + M  + ++ +  TY+  +K C      +  R +H  +     +    +   L++M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K G +DEAR +F  MP++N+++W  +IS +  +  + +A      M REGV  +  T 
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           S+VL++      +   +Q+H   +K   ESD ++ ++LID Y K G   DA+ +F E   
Sbjct: 121 SSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT 177

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DLV   S+I  +AQ   G+E L LY  M+  +   D    +S+L AC  L+  E G+QV
Sbjct: 178 GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQV 237

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHGR 480
           HVH++K+    D    N+L++MY KCGS++DA+  F+ +  ++ ++SWS MI GLAQ+G 
Sbjct: 238 HVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGF 295

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             +AL++F  M   G  PN+IT++ VL AC+HAGLV +  ++F+SM++ FGI P +EHY 
Sbjct: 296 SADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYG 355

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C+ID+LGRAGK  EA++L+  M  + +A  W  LLGA R++KNV++  +AA+ +  ++P 
Sbjct: 356 CIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPA 415

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            + T++LLSNIYA++  W++VA+VRR M+   +KK+PG SWIEV  +V+ F +GD SH R
Sbjct: 416 DAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPR 475

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +EI  +L ++   L + GYVP     L D+E  + E  L +HSEKLA+ FGL++ P   
Sbjct: 476 IEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQK 535

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TI ++KNLRIC DCH   + +S++ +R I++RD  R+HHFR G CSCG YW
Sbjct: 536 TIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/362 (34%), Positives = 209/362 (57%), Gaps = 11/362 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C  +  +     VH  V   G++   F+ N+L+ MY K G   ++R LFD +P+R+
Sbjct: 22  LIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRN 81

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           VVSW ++ S Y + +   +A+ F   M+  G+RPN ++ SS++ AC    D LL  R++H
Sbjct: 82  VVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC----DGLLNLRQLH 137

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K+G +SD+F  +AL+D Y+K+G   DA+ VF ++   D+V WN++I G   +   D
Sbjct: 138 GSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGD 197

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L L+++MK ++   +  T TS L+AC G+ L ELGRQ+H  ++K +   D I+   L+
Sbjct: 198 ETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALL 255

Query: 240 DMYAKCGSMDEARMIF-HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           DMY KCGS+++A ++F  +M EK++I+W+ +I+G  QNG   +A  LF  M  +G   + 
Sbjct: 256 DMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNY 315

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD--YIVNSLIDAYGKCGHVEDAVKIF 356
            T+  VL +  S   +      +  S+K  F  D        +ID  G+ G +++AVK+ 
Sbjct: 316 ITILGVLFA-CSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLI 374

Query: 357 KE 358
            E
Sbjct: 375 HE 376



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 197/392 (50%), Gaps = 18/392 (4%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           +  + S +I  C   G     R +H +    GY+   F  N L++MY K G L++A  +F
Sbjct: 15  DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
            ++   ++VSW  +I+       N  AL     M    + PNM+TY+S L+AC G  L  
Sbjct: 75  DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDG--LLN 132

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           L RQLH S++K+ ++SD  V   L+D Y+K G   +A  +F+ M   +L+ WN +I G  
Sbjct: 133 L-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA 191

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           QN    E   L+  M R     DQ+TL++VL++      + + +QVH   +K  ++ D  
Sbjct: 192 QNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLI 249

Query: 335 IVNSLIDAYGKCGHVEDAVKIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           + N+L+D Y KCG +EDA  +F +  +  D+++ ++MI   AQ G   +ALKL+  M+ +
Sbjct: 250 LNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSK 309

Query: 394 EINPDSFVCSSLLNACANLSAYEQG----KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
              P+      +L AC++      G    + +  H   FG          ++++  + G 
Sbjct: 310 GPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEH---FGIDPGREHYGCIIDLLGRAGK 366

Query: 450 IDDADRAFSEI---PDRGIVSWSAMIGGLAQH 478
           +D+A +   E+   PD   V+W  ++G    H
Sbjct: 367 LDEAVKLIHEMNHEPD--AVTWRILLGACRVH 396



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 9/187 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
           VL+ACT    L LG QVH  V    +D D  + N+L+ MY KCG+  D+  LF  +  E+
Sbjct: 221 VLRACTGLALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEK 278

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            V+SW+++ +      F  +A+  F+ M   G +PN  ++  ++ AC+ +G  L+    +
Sbjct: 279 DVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAG--LVNDGWY 336

Query: 120 GY-SIK--LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLH 175
            + S+K   G D        ++D+  + G L++AV +  ++ H PD V+W  ++  C +H
Sbjct: 337 YFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVH 396

Query: 176 EHNDWAL 182
           ++ D A+
Sbjct: 397 KNVDLAI 403


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/602 (39%), Positives = 380/602 (63%), Gaps = 5/602 (0%)

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           L+ ++   L +   + +  + P+   Y   LK C  +   + G+ +H  L+  + ++D +
Sbjct: 68  LNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLV 127

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS---LFPWMY 290
           +   ++ MYAKCGS++ AR +F  M  K+++ W  +I+G+ Q+G    A +   LF  M 
Sbjct: 128 IKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMV 187

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           R+G+  ++  LS+++K      +    KQ+H    K  F+ + ++ +SL+D Y +CG + 
Sbjct: 188 RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELR 247

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           ++  +F E  + + V+  ++I+ +A+ G GEEAL L+++MQ        F  S+LL + +
Sbjct: 248 ESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSS 307

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
              + EQGK +H H++K G     + GN+L++MYAK G+I DA + F  +    +VS ++
Sbjct: 308 TTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNS 367

Query: 471 MIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           M+ G AQHG GKEA+++F +M L   + PN IT +SVL AC+HAGL+ E  ++FE M KK
Sbjct: 368 MLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELM-KK 426

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           +G++P   HY  ++D+ GRAG   +A   ++ MP + NA++WGALLGA++++KN E+G +
Sbjct: 427 YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAY 486

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           AA+ +  ++P     H LLSNIYASAG W +VAKVR+ MKD+ LKKEP  SW+E+++ V+
Sbjct: 487 AAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVH 546

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F+  D SH +  ++Y   + ++  + + GYVP        V++ EKE  L +HSEKLA+
Sbjct: 547 IFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLAL 606

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AF L+ T PG+ IR+ KN+R+C DCH++ +++S +V REIIVRD NRFHHFR+GSCSC  
Sbjct: 607 AFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRD 666

Query: 770 YW 771
           YW
Sbjct: 667 YW 668



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 221/427 (51%), Gaps = 12/427 (2%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P+    + ++  C   G    G+ +H + +   + +D+   N+++ MYAK G+LE A 
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDW------ALKLFQQMKSSEINPNMFTYTSALK 205
            VF ++   D+V+W ++I G   +  + +      AL LF +M    + PN F  +S +K
Sbjct: 147 QVFDEMCVKDVVTWTSMITG---YSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVK 203

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
            C  +     G+Q+H    K   + +  VG  LVDMYA+CG + E+R++F  +  KN ++
Sbjct: 204 CCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVS 263

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +ISG  + G   EA  LF  M REG G  + T S +L S ++  ++   K +HA  +
Sbjct: 264 WNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMM 323

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K+  +   Y+ N+L+  Y K G++ DA K+F     VD+V+C SM+  YAQ GLG+EA++
Sbjct: 324 KSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVE 383

Query: 386 LYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           L+ EM    EI P+     S+L AC++    ++G      + K+G         ++V+++
Sbjct: 384 LFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLF 443

Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHIT 502
            + G +D A     E+P +     W A++G    H   +       ++LE D   P   T
Sbjct: 444 GRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHT 503

Query: 503 LVSVLCA 509
           L+S + A
Sbjct: 504 LLSNIYA 510



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 225/475 (47%), Gaps = 51/475 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK CT    L  G  VH  ++ + F +D  + NS++ MYAKCG+   +R++FD +  + 
Sbjct: 97  LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156

Query: 61  VVSWNSLFSCYVHCDFLEEA---VCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           VV+W S+ + Y    +   A   +  F EMV  G+RPNEF+LSS++  C   G  + G++
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IHG   K G+  ++F  ++LVDMYA+ G L ++  VF ++E  + VSWNA+I+G      
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGE 276

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + AL LF +M+        FTY++ L + +     E G+ LH  ++K   K    VG  
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MYAK G++ +A+ +F  + + ++++ N ++ G+ Q+G   EA  LF  M        
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMM------- 389

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF- 356
                                      +    E +D    S++ A    G +++ +  F 
Sbjct: 390 ---------------------------LWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE 422

Query: 357 ---KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
              K      L   T+++  + + GL ++A     EM    I P++ +  +LL A     
Sbjct: 423 LMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEM---PIEPNATIWGALLGASKMHK 479

Query: 414 AYEQGKQVHVHIIKFGFMSDTF---AGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
             E G      +++     D F   A   L N+YA  G   D  +   E+ D G+
Sbjct: 480 NTEMGAYAAQKVLEL----DPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGL 530


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/613 (39%), Positives = 372/613 (60%), Gaps = 11/613 (1%)

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
           SWNA +       H   AL L+ QM +S  +PN FT+  A K+CA + L   G QLH  +
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 224 IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF-HLMPEKNL-IAWNIVISGHLQNGGDME 281
           IK   + +P V   L+ MY KC ++  AR +F      +NL + +N +I+G+  N    +
Sbjct: 83  IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
           A  LF  M +EGV  +  T+  ++   A    +G    +HA SV+   + D  + N L+ 
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            Y +CG V+ A K+F       L+   +MI+ YAQ GL    L LY +M+   I PD   
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
              +L++CA+L A+  G++V   I   GF  + F  N+L+NMYA+CG++  A   F  + 
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           ++ ++SW+A+I G   HG+G+ A+Q+F +M+    LP+    VSVL AC+HAGL  +  +
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           +F +ME+ +G+QP  EHY+C++D+LGRAG+ +EA +L+ +M  + + +VWGALLGA +I+
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442

Query: 582 KNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
           +NVE+ + A E +   EP     +VLLSNI++ AG  + + +VR  M++ KLKKEPG S+
Sbjct: 443 RNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSY 502

Query: 642 IEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY 701
           +E + +++ F  GDR+H +++EIY  LD + D++ + G      ++ +D +ES  E+L+ 
Sbjct: 503 VEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRG-----GSNDND-QESRNEELIT 556

Query: 702 H---HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
               HSEKLA+AFGLI T PG  I V KNLR+C DCH   + +S+IV R+++VRD  RFH
Sbjct: 557 GMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFH 616

Query: 759 HFRNGSCSCGGYW 771
           HF+NG CSC  YW
Sbjct: 617 HFKNGVCSCKDYW 629



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 8/442 (1%)

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           + +  SWN+           +EA+  + +M+ SG  PN F+      +CA     L G +
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLH 175
           +HG+ IK G + + F   +L+ MY K   +  A  VF +  H     V +NA+IAG  L+
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A+ LF+QM+   ++ N  T    +  CAG      G  LH   ++  +  D  VG
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MY +CGS+D AR +F  MPEK LI WN +ISG+ QNG       L+  M   G+ 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D  TL  VL S A   A    ++V      + F  + ++ N+LI+ Y +CG++  A  I
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F   +  ++++ T++I  Y   G GE A++L+ EM   +  PD     S+L+AC++    
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377

Query: 416 EQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAM 471
           E+G      + + +G        + +V++  + G +++A +    +   PD  +  W A+
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAV--WGAL 435

Query: 472 IGGLAQHGRGKEALQMFGQMLE 493
           +G    H   + A   F +++E
Sbjct: 436 LGACKIHRNVELAELAFEKVIE 457



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 179/367 (48%), Gaps = 13/367 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI--PER 59
            K+C S      G Q+HG V+ TG + + FV  SL+ MY KC     +R++FD       
Sbjct: 63  FKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRN 122

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V +N+L + Y       +AV  F++M   G+  N  ++  +I  CAG      G  +H
Sbjct: 123 LAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLH 182

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             S++ G D D+   N L+ MY + G+++ A  +F  +    +++WNA+I+G   +    
Sbjct: 183 ACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAG 242

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L L+++M+ + I P+  T    L +CA +     GR++   +       +P +   L+
Sbjct: 243 HVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALI 302

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MYA+CG++ +AR IF  M EKN+I+W  +I+G+  +G    A  LF  M       D  
Sbjct: 303 NMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGA 362

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI------VNSLIDAYGKCGHVEDAV 353
              +VL + +     G+ ++   L   TA E D  +       + ++D  G+ G +E+A 
Sbjct: 363 AFVSVLSACSH---AGLTEK--GLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEAR 417

Query: 354 KIFKESS 360
           K+    S
Sbjct: 418 KLIGSMS 424



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 143/272 (52%), Gaps = 2/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  C     L  G  +H   V  G D D  V N L+ MY +CG+   +R+LFD +PE+ 
Sbjct: 165 LIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKG 224

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +++WN++ S Y         +  +++M  +GI P+  +L  ++++CA  G    GR++  
Sbjct: 225 LITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQ 284

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G+  + F  NAL++MYA+ GNL  A A+F  +   +++SW A+IAG  +H   + 
Sbjct: 285 RIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGEL 344

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
           A++LF +M SS+  P+   + S L AC+   L E G     ++ +   ++  P     +V
Sbjct: 345 AVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVV 404

Query: 240 DMYAKCGSMDEAR-MIFHLMPEKNLIAWNIVI 270
           D+  + G ++EAR +I  +  E +   W  ++
Sbjct: 405 DLLGRAGRLEEARKLIGSMSVEPDGAVWGALL 436


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/683 (37%), Positives = 388/683 (56%), Gaps = 3/683 (0%)

Query: 6   TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWN 65
           T  + L  G  +H  ++ +   S  ++ANSLV +YAKC    +++ +F+ I  + VVSWN
Sbjct: 17  THNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWN 75

Query: 66  SLFSCYVH--CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
            + + Y           +  F+ M      PN  + + +  A +   D+  GR  H  +I
Sbjct: 76  CIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAI 135

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K+    D+F  ++L++MY K G   +A  VF  +   + VSW  +I+G    +    AL 
Sbjct: 136 KMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALG 195

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           LF+ M+  E   N F +TS L A    EL   G+Q+HC  +K  + S   VG  LV MYA
Sbjct: 196 LFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYA 255

Query: 244 KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLST 303
           KCGS+D+A   F    +KN I W+ +I+G+ Q+G   +A  LF  M+  G+   + T   
Sbjct: 256 KCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVG 315

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           V+ + +   A    KQVH   +K  FES  Y++ +L+D Y KC  + DA K F      D
Sbjct: 316 VINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPD 375

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           +V  TSMI  Y Q G  E+AL LY  M+   I P+    +S+L AC++L+A EQGKQ+H 
Sbjct: 376 IVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHA 435

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
             +K+GF  +   G++L  MYAKCG + D    F  +P R ++SW+AMI GL+Q+G GKE
Sbjct: 436 RTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKE 495

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL++F +M  +G  P+++T V++L AC+H GLV     +F  M  +FG+ P  EHYACM+
Sbjct: 496 ALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMV 555

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
           DIL RAGK +EA+E  ++        +W  +LGA R Y+N E+G +A E L  +  ++SS
Sbjct: 556 DILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESS 615

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
            +VLLS+IY++ G W++V +VRR MK   + KEPG SWIE+K  V+ F V D+ H +  +
Sbjct: 616 AYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGD 675

Query: 664 IYAKLDEVSDLLNKAGYVPMVET 686
           I+ +L ++S  +   GY P  ++
Sbjct: 676 IHVELRQLSKQMKDEGYEPATDS 698



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/481 (33%), Positives = 258/481 (53%), Gaps = 14/481 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  A ++  D   G   H + +      D FV +SL+ MY K G   ++R++FD +PER+
Sbjct: 114 VFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERN 173

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ S Y       EA+  F+ M       NEF  +S+++A         G++IH 
Sbjct: 174 SVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHC 233

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G  S +   NALV MYAK G+L+DA+  F+     + ++W+A+I G      +D 
Sbjct: 234 IAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDK 293

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF  M  S I P+ FT+   + AC+ +     G+Q+H  L+K+  +S   V   LVD
Sbjct: 294 ALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVD 353

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKC S+ +AR  F  + E +++ W  +I G++QNG + +A SL+  M  EG+  ++ T
Sbjct: 354 MYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELT 413

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VLK+ +S  A+   KQ+HA +VK  F  +  I ++L   Y KCG ++D   +F+   
Sbjct: 414 MASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP 473

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D+++  +MI+  +Q G G+EAL+L+ EMQ     PD     ++L+AC+++   E+G  
Sbjct: 474 ARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWG 533

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYA-------KCGSIDDA-DRAFSEIPDRGIVSWSAMI 472
                  F  M D F  +  V  YA       + G + +A +   S   D G+  W  ++
Sbjct: 534 Y------FRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIIL 587

Query: 473 G 473
           G
Sbjct: 588 G 588



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 234/467 (50%), Gaps = 38/467 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A T  + +  G Q+H I V  G  S   V N+LV MYAKCG+  D+ + F+   +++
Sbjct: 215 VLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKN 274

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++W+++ + Y      ++A+  F  M LSGIRP+EF+   +INAC+  G +  G+++H 
Sbjct: 275 SITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHD 334

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +KLG++S ++   ALVDMYAK  ++ DA   F  ++ PDIV W ++I G V +  N+ 
Sbjct: 335 YLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENED 394

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+ +M+   I PN  T  S LKAC+ +   E G+Q+H   +K     +  +G  L  
Sbjct: 395 ALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALST 454

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG + +  ++F  MP +++I+WN +ISG  QNG   EA  LF  M  EG   D  T
Sbjct: 455 MYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVT 514

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN--SLIDAYGKCGHVEDAVKIFKE 358
              +L S  S   +      +   +   F  D  + +   ++D   + G +++A++ F E
Sbjct: 515 FVNIL-SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIE-FTE 572

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           S+ +D   C   I                                 +L AC N   YE G
Sbjct: 573 SATIDHGMCLWRI---------------------------------ILGACRNYRNYELG 599

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
                 +++ G   ++ A   L ++Y+  G  +D +R    +  RG+
Sbjct: 600 AYAGEKLMELG-SQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGV 645


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 364/592 (61%), Gaps = 2/592 (0%)

Query: 181 ALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF+ ++ +   + +  TY + + AC G++     +++   +I   +  D  +   ++
Sbjct: 114 ALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVL 173

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            M+ KCG M +AR +F  MPEKN+++WN +I G +  G   EA  LF  M+++       
Sbjct: 174 LMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSR 233

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
              T++++ A    I   +Q+H+ S+KT    D ++  +LID Y KCG +EDA  +F + 
Sbjct: 234 MFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                V   S+I  YA  G  EEAL +Y EM+D  +  D+F  S ++  CA L++ E  K
Sbjct: 294 PEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAK 353

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q H  +++ GF  D  A  +LV++Y+K G I+DA   F  +P + ++SW+A+I G   HG
Sbjct: 354 QAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHG 413

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           RG EA++MF +ML +G++PNH+T ++VL AC+++GL       FESM +   I+P   HY
Sbjct: 414 RGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHY 473

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACMI++LGR G   EA  L+   PF+   ++W ALL A R++KN E+G+ AAE L+ + P
Sbjct: 474 ACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGP 533

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           EK S +V+L NIY  +G  +  A V + +K   L+  P  SWIE+K + Y F  GD+ HA
Sbjct: 534 EKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHA 593

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           +SKEIY KLDE+   ++K GYVP  +  L DV+E E+  LLY HSEKLA+AFGLI T   
Sbjct: 594 QSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLY-HSEKLAIAFGLINTSDW 652

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +++ ++ RIC DCH++ + I+ +  REI+VRD +RFHHF++GSCSCG YW
Sbjct: 653 TPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 241/505 (47%), Gaps = 48/505 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   K +    +V   ++ +G D DE++ N +++M+ KCG  ID+RRLFD +PE++
Sbjct: 137 LVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKN 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++    V      EA   F  M             +MI A AG G    GR++H 
Sbjct: 197 ILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHS 256

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K G   D+F A AL+DMY+K G++EDA  VF  +     V WN++IAG  LH +++ 
Sbjct: 257 CSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEE 316

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL ++ +M+ S +  + FT++  ++ CA +   E  +Q H  L++     D +    LVD
Sbjct: 317 ALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVD 376

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+K G +++A+ +F +MP KN+I+WN +I+G+  +G  +EA  +F  M  EG+  +  T
Sbjct: 377 LYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVT 436

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL S  S+  +          +  +   D  I    +                    
Sbjct: 437 FLAVL-SACSYSGLS----DRGWEIFESMSRDHKIKPRAMH------------------- 472

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                AC  MI    + GL +EA  L   ++D    P   + ++LL AC     +E GK 
Sbjct: 473 ----YAC--MIELLGREGLLDEAFAL---IKDAPFKPTVNMWAALLTACRVHKNFELGKF 523

Query: 421 VHVHIIKFGFMSDTFAGN-SLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW------ 468
               +  +G   +  +    L+N+Y + G +++A      +  RG+      SW      
Sbjct: 524 AAEKL--YGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQ 581

Query: 469 -SAMIGGLAQHGRGKEALQMFGQML 492
               I G   H + KE  Q   +++
Sbjct: 582 PYGFISGDKCHAQSKEIYQKLDELM 606



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 229/462 (49%), Gaps = 20/462 (4%)

Query: 79  EAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           EA+  F+ + L+G    +  +  ++++AC G       +K+  Y I  G D D +  N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           + M+ K G + DA  +F ++   +I+SWN +I G V       A +LF  M     +   
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
             + + ++A AG+ L   GRQLH   +K  +  D  V   L+DMY+KCGS+++A+ +F  
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MPEK  + WN +I+G+  +G   EA S++  M   GV  D  T S +++  A   ++   
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ HA  V+  F  D     +L+D Y K G +EDA  +F      ++++  ++I  Y   
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-----HVHIIKFGFMS 432
           G G EA++++  M    + P+     ++L+AC+     ++G ++       H IK   M 
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GK-EALQM 487
                  ++ +  + G +D+A     + P +  V+ W+A++     H     GK  A ++
Sbjct: 473 YA----CMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL 528

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           +G   E   L N++ L+++    N +G + EA    ++++++
Sbjct: 529 YGMGPEK--LSNYVVLLNIY---NRSGRLEEAAAVIQTLKRR 565


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/682 (36%), Positives = 404/682 (59%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK+C++ ++L LG+QVH + V TG + D    ++LV MY KC +  D+   F  +PER+
Sbjct: 197 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 256

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW +  +  V  +     +  F EM   G+  ++ S +S   +CA       GR++H 
Sbjct: 257 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 316

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK  + SD     A+VD+YAK  +L DA   F  + +  + + NA++ G V       
Sbjct: 317 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 376

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQ M  S I  ++ + +    ACA  +    G+Q+HC  IK     D  V   ++D
Sbjct: 377 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 436

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++ EA +IF  M +K+ ++WN +I+   QNG   +    F  M R G+  D  T
Sbjct: 437 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 496

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A+ +++     VH   +K+   SD ++ ++++D Y KCG +++A K+     
Sbjct: 497 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 556

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++++ ++     EEA K + EM D  + PD F  +++L+ CANL+  E GKQ
Sbjct: 557 GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 616

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK   + D +  ++LV+MYAKCG + D+   F ++  R  VSW+AMI G A HG 
Sbjct: 617 IHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGL 676

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL+MF +M ++ V+PNH T V+VL AC+H GL  +   +F  M   + ++P  EH+A
Sbjct: 677 GVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA 736

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DILGR+   QEA++ +++MPFQA+A +W  LL   +I ++VE+ + AA  +  ++P+
Sbjct: 737 CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPD 796

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS ++LLSN+YA +G W +V++ RR +K  +LKKEPG SWIEV+ +++ F VGD++H R
Sbjct: 797 DSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 856

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           S E+Y  L+++   +  +GY P
Sbjct: 857 SGELYEMLNDLIGEMKLSGYEP 878



 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 186/612 (30%), Positives = 324/612 (52%), Gaps = 14/612 (2%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N+++  Y+  G+   +  LFD +P+  VVSWN+L S Y      +E+V  F EM   G+ 
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 188

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+  + + ++ +C+   +  LG ++H  ++K G + D+ + +ALVDMY K  +L+DA+  
Sbjct: 189 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 248

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  +   + VSW A IAGCV +E     L+LF +M+   +  +  +Y SA ++CA M   
Sbjct: 249 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 308

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             GRQLH   IK +  SD +VG  +VD+YAK  S+ +AR  F  +P   +   N ++ G 
Sbjct: 309 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 368

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           ++ G  +EA  LF +M R  + FD  +LS V  + A  +     +QVH L++K+ F+ D 
Sbjct: 369 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI 428

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+++D YGKC  + +A  IF+     D V+  ++I A  Q G  ++ +  + EM   
Sbjct: 429 CVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 488

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + PD F   S+L ACA L + E G  VH  +IK G  SD F  +++V+MY KCG ID+A
Sbjct: 489 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 548

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            +    I  + +VSW+A++ G + +   +EA + F +ML+ G+ P+H T  +VL  C + 
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             +   K     + K+   + + + Y  + ++D+  + G   +++ + + +  +   S W
Sbjct: 609 ATIELGKQIHGQIIKQ---EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-W 664

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPE----KSSTHVLLSNIYASAGMWDNVAKVRRF 627
            A++    ++    +G  A  M   ++ E      +T V +    +  G++D+  +    
Sbjct: 665 NAMICGYALHG---LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 721

Query: 628 MKDNKLKKEPGM 639
           M  +  K EP +
Sbjct: 722 MTTH-YKLEPQL 732



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 241/478 (50%), Gaps = 14/478 (2%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D  S N ++  Y+  G++  AVA+F  +  PD+VSWNA+++G         ++ LF +M 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              ++P+  T+   LK+C+ +E   LG Q+H   +K  ++ D   G  LVDMY KC S+D
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A   F+ MPE+N ++W   I+G +QN   +    LF  M R G+G  Q + ++  +S A
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +   +   +Q+HA ++K  F SD  +  +++D Y K   + DA + F       +    +
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+    + GLG EA+ L+  M    I  D    S + +ACA    Y QG+QVH   IK G
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F  D    N+++++Y KC ++ +A   F  +  +  VSW+A+I  L Q+G   + +  F 
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483

Query: 490 QMLEDGVLPNHITLVSVLCACN-----HAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +ML  G+ P+  T  SVL AC        GL+   K        K G+       + ++D
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDK------VIKSGLGSDAFVASTVVD 537

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH-AAEML-FAIEPE 600
           +  + G   EA +L D +  Q   S W A+L    + K  E  Q   +EML   ++P+
Sbjct: 538 MYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 594



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 202/430 (46%), Gaps = 45/430 (10%)

Query: 186 QQMKSSEINPNMFTYTSALKACA--GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           +Q +   + P   T++   ++CA  G E    GR  H  ++         V   L+ MYA
Sbjct: 46  EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 105

Query: 244 KCGSMDEARMIFHLMPEKN-------------------------------LIAWNIVISG 272
           +C     AR +F  MP ++                               +++WN ++SG
Sbjct: 106 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 165

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q G   E+  LF  M R GV  D+TT + +LKS ++ + + +  QVHAL+VKT  E D
Sbjct: 166 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 225

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
               ++L+D YGKC  ++DA+  F      + V+  + I    Q       L+L++EMQ 
Sbjct: 226 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 285

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +       +S   +CA +S    G+Q+H H IK  F SD   G ++V++YAK  S+ D
Sbjct: 286 LGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 345

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A RAF  +P+  + + +AM+ GL + G G EA+ +F  M+   +  + ++L  V  AC  
Sbjct: 346 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSAC-- 403

Query: 513 AGLVAEAKHHFESMEKK-FGIQPMQEHYAC----MIDILGRAGKFQEAMELVDTMPFQAN 567
               AE K +F+  +     I+   +   C    ++D+ G+     EA  +   M  Q +
Sbjct: 404 ----AETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKD 458

Query: 568 ASVWGALLGA 577
           +  W A++ A
Sbjct: 459 SVSWNAIIAA 468



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 90/233 (38%), Gaps = 35/233 (15%)

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS--AYEQGKQVHVHIIKFGFMSDTF 435
            L E A     + Q   + P     S +  +CA     A   G+  H  ++  GF+   F
Sbjct: 36  ALAEHARMPAEQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAF 95

Query: 436 AGNSLVNM-------------------------------YAKCGSIDDADRAFSEIPDRG 464
             N L+ M                               Y+  G I  A   F  +PD  
Sbjct: 96  VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VSW+A++ G  Q G  +E++ +F +M   GV P+  T   +L +C+    ++       
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGV-QVH 214

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           ++  K G++      + ++D+ G+     +A+     MP + N   WGA +  
Sbjct: 215 ALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAG 266


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 363/592 (61%), Gaps = 2/592 (0%)

Query: 181 ALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF+ ++ +   + +  TY + + AC G++     +++   +I   +  D  +   ++
Sbjct: 114 ALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVL 173

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            M+ KCG M +AR +F  MPEKN+++WN +I G +  G   EA  LF  M++        
Sbjct: 174 LMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSR 233

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
              T++++ A    I   +Q+H+ S+KT    D ++  +LID Y KCG +EDA  +F + 
Sbjct: 234 MFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                V   S+I  YA  G  EEAL +Y EM+D  +  D+F  S ++  CA L++ E  K
Sbjct: 294 PEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAK 353

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q H  +++ GF  D  A  +LV++Y+K G I+DA   F  +P + ++SW+A+I G   HG
Sbjct: 354 QAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHG 413

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           RG EA++MF +ML +G++PNH+T ++VL AC+++GL       FESM +   I+P   HY
Sbjct: 414 RGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHY 473

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACMI++LGR G   EA  L+   PF+   ++W ALL A R++KN E+G+ AAE L+ + P
Sbjct: 474 ACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGP 533

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           EK S +V+L NIY  +G  +  A V + +K   L+  P  SWIE+K + Y F  GD+ HA
Sbjct: 534 EKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHA 593

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           +SKEIY KLDE+   ++K GYVP  +  L DV+E E+  LLY HSEKLA+AFGLI T   
Sbjct: 594 QSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLY-HSEKLAIAFGLINTSDW 652

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +++ ++ RIC DCH++ + I+ +  REI+VRD +RFHHF++GSCSCG YW
Sbjct: 653 TPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 240/505 (47%), Gaps = 48/505 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   K +    +V   ++ +G D DE++ N +++M+ KCG  ID+RRLFD +PE++
Sbjct: 137 LVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKN 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++    V      EA   F  M             +MI A AG G    GR++H 
Sbjct: 197 ILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHS 256

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K G   D+F A AL+DMY+K G++EDA  VF  +     V WN++IAG  LH +++ 
Sbjct: 257 CSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEE 316

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL ++ +M+ S +  + FT++  ++ CA +   E  +Q H  L++     D +    LVD
Sbjct: 317 ALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVD 376

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+K G +++A+ +F +MP KN+I+WN +I+G+  +G  +EA  +F  M  EG+  +  T
Sbjct: 377 LYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVT 436

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL S  S+  +          +  +   D  I    +                    
Sbjct: 437 FLAVL-SACSYSGLS----DRGWEIFESMSRDHKIKPRAMH------------------- 472

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                AC  MI    + GL +EA  L   ++D    P   + ++LL AC     +E GK 
Sbjct: 473 ----YAC--MIELLGREGLLDEAFAL---IKDAPFKPTVNMWAALLTACRVHKNFELGKF 523

Query: 421 VHVHIIKFGFMSDTFAGN-SLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW------ 468
               +  +G   +  +    L+N+Y   G +++A      +  RG+      SW      
Sbjct: 524 AAEKL--YGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQ 581

Query: 469 -SAMIGGLAQHGRGKEALQMFGQML 492
               I G   H + KE  Q   +++
Sbjct: 582 PYGFISGDKCHAQSKEIYQKLDELM 606



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 229/462 (49%), Gaps = 20/462 (4%)

Query: 79  EAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           EA+  F+ + L+G    +  +  ++++AC G       +K+  Y I  G D D +  N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           + M+ K G + DA  +F ++   +I+SWN +I G V       A +LF  M     +   
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
             + + ++A AG+ L   GRQLH   +K  +  D  V   L+DMY+KCGS+++A+ +F  
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MPEK  + WN +I+G+  +G   EA S++  M   GV  D  T S +++  A   ++   
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ HA  V+  F  D     +L+D Y K G +EDA  +F      ++++  ++I  Y   
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-----HVHIIKFGFMS 432
           G G EA++++  M    + P+     ++L+AC+     ++G ++       H IK   M 
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GK-EALQM 487
                  ++ +  + G +D+A     + P +  V+ W+A++     H     GK  A ++
Sbjct: 473 YA----CMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL 528

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           +G   E   L N++ L+++    N +G + EA    ++++++
Sbjct: 529 YGMGPEK--LSNYVVLLNIY---NXSGRLEEAAAVIQTLKRR 565


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/682 (36%), Positives = 404/682 (59%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK+C++ ++L LG+QVH + V TG + D    ++LV MY KC +  D+   F  +PER+
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW +  +  V  +     +  F EM   G+  ++ S +S   +CA       GR++H 
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK  + SD     A+VD+YAK  +L DA   F  + +  + + NA++ G V       
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQ M  S I  ++ + +    ACA  +    G+Q+HC  IK     D  V   ++D
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++ EA +IF  M +K+ ++WN +I+   QNG   +    F  M R G+  D  T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A+ +++     VH   +K+   SD ++ ++++D Y KCG +++A K+     
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++++ ++     EEA K + EM D  + PD F  +++L+ CANL+  E GKQ
Sbjct: 515 GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK   + D +  ++LV+MYAKCG + D+   F ++  R  VSW+AMI G A HG 
Sbjct: 575 IHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGL 634

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL+MF +M ++ V+PNH T V+VL AC+H GL  +   +F  M   + ++P  EH+A
Sbjct: 635 GVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA 694

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DILGR+   QEA++ +++MPFQA+A +W  LL   +I ++VE+ + AA  +  ++P+
Sbjct: 695 CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPD 754

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS ++LLSN+YA +G W +V++ RR +K  +LKKEPG SWIEV+ +++ F VGD++H R
Sbjct: 755 DSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 814

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           S E+Y  L+++   +  +GY P
Sbjct: 815 SGELYEMLNDLIGEMKLSGYEP 836



 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 186/612 (30%), Positives = 324/612 (52%), Gaps = 14/612 (2%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N+++  Y+  G+   +  LFD +P+  VVSWN+L S Y      +E+V  F EM   G+ 
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+  + + ++ +C+   +  LG ++H  ++K G + D+ + +ALVDMY K  +L+DA+  
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  +   + VSW A IAGCV +E     L+LF +M+   +  +  +Y SA ++CA M   
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             GRQLH   IK +  SD +VG  +VD+YAK  S+ +AR  F  +P   +   N ++ G 
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           ++ G  +EA  LF +M R  + FD  +LS V  + A  +     +QVH L++K+ F+ D 
Sbjct: 327 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI 386

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+++D YGKC  + +A  IF+     D V+  ++I A  Q G  ++ +  + EM   
Sbjct: 387 CVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + PD F   S+L ACA L + E G  VH  +IK G  SD F  +++V+MY KCG ID+A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            +    I  + +VSW+A++ G + +   +EA + F +ML+ G+ P+H T  +VL  C + 
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             +   K     + K+   + + + Y  + ++D+  + G   +++ + + +  +   S W
Sbjct: 567 ATIELGKQIHGQIIKQ---EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-W 622

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPE----KSSTHVLLSNIYASAGMWDNVAKVRRF 627
            A++    ++    +G  A  M   ++ E      +T V +    +  G++D+  +    
Sbjct: 623 NAMICGYALHG---LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 679

Query: 628 MKDNKLKKEPGM 639
           M  +  K EP +
Sbjct: 680 MTTH-YKLEPQL 690



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 258/522 (49%), Gaps = 18/522 (3%)

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            MV+SG  PN F  + ++   A    +   R++     +     D  S N ++  Y+  G
Sbjct: 42  RMVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPR----RDTVSWNTMLTAYSHAG 97

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           ++  AVA+F  +  PD+VSWNA+++G         ++ LF +M    ++P+  T+   LK
Sbjct: 98  DISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLK 157

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           +C+ +E   LG Q+H   +K  ++ D   G  LVDMY KC S+D+A   F+ MPE+N ++
Sbjct: 158 SCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS 217

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W   I+G +QN   +    LF  M R G+G  Q + ++  +S A+   +   +Q+HA ++
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K  F SD  +  +++D Y K   + DA + F       +    +M+    + GLG EA+ 
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L+  M    I  D    S + +ACA    Y QG+QVH   IK GF  D    N+++++Y 
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           KC ++ +A   F  +  +  VSW+A+I  L Q+G   + +  F +ML  G+ P+  T  S
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457

Query: 506 VLCACN-----HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           VL AC        GL+   K        K G+       + ++D+  + G   EA +L D
Sbjct: 458 VLKACAALRSLEYGLMVHDK------VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQH-AAEML-FAIEPE 600
            +  Q   S W A+L    + K  E  Q   +EML   ++P+
Sbjct: 512 RIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 203/430 (47%), Gaps = 45/430 (10%)

Query: 186 QQMKSSEINPNMFTYTSALKACA--GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           +Q +   + P   T++   ++CA  G E    GR  H  ++      +  V   L+ MYA
Sbjct: 4   EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYA 63

Query: 244 KCGSMDEARMIFHLMPEKN-------------------------------LIAWNIVISG 272
           +C     AR +F  MP ++                               +++WN ++SG
Sbjct: 64  RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q G   E+  LF  M R GV  D+TT + +LKS ++ + + +  QVHAL+VKT  E D
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 183

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
               ++L+D YGKC  ++DA+  F      + V+  + I    Q       L+L++EMQ 
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +       +S   +CA +S    G+Q+H H IK  F SD   G ++V++YAK  S+ D
Sbjct: 244 LGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 303

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A RAF  +P+  + + +AM+ GL + G G EA+ +F  M+   +  + ++L  V  AC  
Sbjct: 304 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSAC-- 361

Query: 513 AGLVAEAKHHFESMEKK-FGIQPMQEHYAC----MIDILGRAGKFQEAMELVDTMPFQAN 567
               AE K +F+  +     I+   +   C    ++D+ G+     EA  +   M  Q +
Sbjct: 362 ----AETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKD 416

Query: 568 ASVWGALLGA 577
           +  W A++ A
Sbjct: 417 SVSWNAIIAA 426


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/682 (36%), Positives = 404/682 (59%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK+C++ ++L LG+QVH + V TG + D    ++LV MY KC +  D+   F  +PER+
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW +  +  V  +     +  F EM   G+  ++ S +S   +CA       GR++H 
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK  + SD     A+VD+YAK  +L DA   F  + +  + + NA++ G V       
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQ M  S I  ++ + +    ACA  +    G+Q+HC  IK     D  V   ++D
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++ EA +IF  M +K+ ++WN +I+   QNG   +    F  M R G+  D  T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A+ +++     VH   +K+   SD ++ ++++D Y KCG +++A K+     
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
              +V+  ++++ ++     EEA K + EM D  + PD F  +++L+ CANL+  E GKQ
Sbjct: 515 GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK   + D +  ++LV+MYAKCG + D+   F ++  R  VSW+AMI G A HG 
Sbjct: 575 IHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGL 634

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL+MF +M ++ V+PNH T V+VL AC+H GL  +   +F  M   + ++P  EH+A
Sbjct: 635 GVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA 694

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DILGR+   QEA++ +++MPFQA+A +W  LL   +I ++VE+ + AA  +  ++P+
Sbjct: 695 CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPD 754

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS ++LLSN+YA +G W +V++ RR +K  +LKKEPG SWIEV+ +++ F VGD++H R
Sbjct: 755 DSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 814

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           S E+Y  L+++   +  +GY P
Sbjct: 815 SGELYEMLNDLIGEMKLSGYEP 836



 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 186/612 (30%), Positives = 324/612 (52%), Gaps = 14/612 (2%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N+++  Y+  G+   +  LFD +P+  VVSWN+L S Y      +E+V  F EM   G+ 
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+  + + ++ +C+   +  LG ++H  ++K G + D+ + +ALVDMY K  +L+DA+  
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  +   + VSW A IAGCV +E     L+LF +M+   +  +  +Y SA ++CA M   
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             GRQLH   IK +  SD +VG  +VD+YAK  S+ +AR  F  +P   +   N ++ G 
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
           ++ G  +EA  LF +M R  + FD  +LS V  + A  +     +QVH L++K+ F+ D 
Sbjct: 327 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI 386

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+++D YGKC  + +A  IF+     D V+  ++I A  Q G  ++ +  + EM   
Sbjct: 387 CVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            + PD F   S+L ACA L + E G  VH  +IK G  SD F  +++V+MY KCG ID+A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            +    I  + +VSW+A++ G + +   +EA + F +ML+ G+ P+H T  +VL  C + 
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             +   K     + K+   + + + Y  + ++D+  + G   +++ + + +  +   S W
Sbjct: 567 ATIELGKQIHGQIIKQ---EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-W 622

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPE----KSSTHVLLSNIYASAGMWDNVAKVRRF 627
            A++    ++    +G  A  M   ++ E      +T V +    +  G++D+  +    
Sbjct: 623 NAMICGYALHG---LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 679

Query: 628 MKDNKLKKEPGM 639
           M  +  K EP +
Sbjct: 680 MTTH-YKLEPQL 690



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 241/478 (50%), Gaps = 14/478 (2%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D  S N ++  Y+  G++  AVA+F  +  PD+VSWNA+++G         ++ LF +M 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              ++P+  T+   LK+C+ +E   LG Q+H   +K  ++ D   G  LVDMY KC S+D
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A   F+ MPE+N ++W   I+G +QN   +    LF  M R G+G  Q + ++  +S A
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +   +   +Q+HA ++K  F SD  +  +++D Y K   + DA + F       +    +
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+    + GLG EA+ L+  M    I  D    S + +ACA    Y QG+QVH   IK G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           F  D    N+++++Y KC ++ +A   F  +  +  VSW+A+I  L Q+G   + +  F 
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 490 QMLEDGVLPNHITLVSVLCACN-----HAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +ML  G+ P+  T  SVL AC        GL+   K        K G+       + ++D
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDK------VIKSGLGSDAFVASTVVD 495

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH-AAEML-FAIEPE 600
           +  + G   EA +L D +  Q   S W A+L    + K  E  Q   +EML   ++P+
Sbjct: 496 MYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 202/430 (46%), Gaps = 45/430 (10%)

Query: 186 QQMKSSEINPNMFTYTSALKACA--GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           +Q +   + P   T++   ++CA  G E    GR  H  ++         V   L+ MYA
Sbjct: 4   EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 63

Query: 244 KCGSMDEARMIFHLMPEKN-------------------------------LIAWNIVISG 272
           +C     AR +F  MP ++                               +++WN ++SG
Sbjct: 64  RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + Q G   E+  LF  M R GV  D+TT + +LKS ++ + + +  QVHAL+VKT  E D
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 183

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
               ++L+D YGKC  ++DA+  F      + V+  + I    Q       L+L++EMQ 
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +       +S   +CA +S    G+Q+H H IK  F SD   G ++V++YAK  S+ D
Sbjct: 244 LGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 303

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A RAF  +P+  + + +AM+ GL + G G EA+ +F  M+   +  + ++L  V  AC  
Sbjct: 304 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSAC-- 361

Query: 513 AGLVAEAKHHFESMEKK-FGIQPMQEHYAC----MIDILGRAGKFQEAMELVDTMPFQAN 567
               AE K +F+  +     I+   +   C    ++D+ G+     EA  +   M  Q +
Sbjct: 362 ----AETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKD 416

Query: 568 ASVWGALLGA 577
           +  W A++ A
Sbjct: 417 SVSWNAIIAA 426


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/636 (38%), Positives = 371/636 (58%), Gaps = 24/636 (3%)

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
           P  ++W  +I     H     +L  F  ++S  I+P+   + S L+A    +   L + L
Sbjct: 39  PHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSL 98

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAK----------------------CGSMDEARMIFHL 257
           H ++I++    D      L++MY+K                         +D  R +F  
Sbjct: 99  HAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDR 158

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           MP +++++WN VI+G+ QNG   EA ++   M +E +  D  TLS++L        +   
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K++H  +++  F+ D +I +SLID Y KC  VE +V  F   S  D ++  S+I    Q 
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  ++ L  +  M   ++ P     SS++ ACA+L+A   GKQ+H +II+ GF  + F  
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338

Query: 438 NSLVNMYAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
           +SL++MYAKCG+I  A   F++I   DR +VSW+A+I G A HG   +A+ +F +ML DG
Sbjct: 339 SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDG 398

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V P ++  ++VL AC+HAGLV E   +F SM++ FG+ P  EHYA + D+LGRAG+ +EA
Sbjct: 399 VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            + +  M  +   SVW  LL A R +KN+E+ +     +  ++P     HV++SNIY++A
Sbjct: 459 YDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAA 518

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
             W + AK+R  M+   LKK P  SWIEV +KV+TF  GD+SH    +I   L+ + + +
Sbjct: 519 QRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQM 578

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            K GYV      LHDV+E  K  LL  HSE+LA+AFG+I+T  G TIRV KN+R+CVDCH
Sbjct: 579 EKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCH 638

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+ +F++KIV REIIVRD +RFHHF+NGSCSCG YW
Sbjct: 639 TAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 176/318 (55%), Gaps = 24/318 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNF-------------- 46
           +L+A T  K   L   +H  V+  GF  D + AN+L+ MY+K                  
Sbjct: 82  LLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNH 141

Query: 47  -------IDS-RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
                  IDS R+LFD +P R VVSWN++ +        EEA+   KEM    +RP+ F+
Sbjct: 142 NNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFT 201

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           LSS++       +   G++IHGY+I+ G+D D+F  ++L+DMYAK   +E +V  F  + 
Sbjct: 202 LSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLS 261

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
           + D +SWN++IAGCV +   D  L  F++M   ++ P   +++S + ACA +    LG+Q
Sbjct: 262 NRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQ 321

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL--MPEKNLIAWNIVISGHLQN 276
           LH  +I++    +  +   L+DMYAKCG++  AR IF+   M ++++++W  +I G   +
Sbjct: 322 LHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381

Query: 277 GGDMEAASLFPWMYREGV 294
           G  ++A SLF  M  +GV
Sbjct: 382 GHALDAVSLFEEMLVDGV 399



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 28/476 (5%)

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           ++W  +  CY     L  ++  F  +   GI P+     S++ A        L + +H  
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 122 SIKLGYDSDMFSANALVDMYAKVG----------------------NLEDAVAVFKDIEH 159
            I+LG+  D+++ANAL++MY+K                         ++    +F  +  
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VSWN VIAG   +   + AL + ++M    + P+ FT +S L           G+++
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H   I+     D  +G  L+DMYAKC  ++ +   FHL+  ++ I+WN +I+G +QNG  
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            +    F  M +E V   Q + S+V+ + A   A+ + KQ+HA  ++  F+ + +I +SL
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSL 341

Query: 340 IDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +D Y KCG+++ A  IF   E    D+V+ T++I   A  G   +A+ L+ EM    + P
Sbjct: 342 LDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKP 401

Query: 398 DSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
                 ++L AC++    ++G K  +     FG         ++ ++  + G +++A   
Sbjct: 402 CYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDF 461

Query: 457 FSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQML--EDGVLPNHITLVSVLCA 509
            S + +    S WS ++     H   + A ++  ++L  + G +  H+ + ++  A
Sbjct: 462 ISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSA 517


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 393/710 (55%), Gaps = 42/710 (5%)

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
           F+CY+H    + A              + F L S++ ACA +    LGR++HG++ K G+
Sbjct: 72  FNCYLHMRSNDAAAL------------DNFILPSLLKACAQASSGDLGRELHGFAQKNGF 119

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
            SD+F  NAL++MY K G L  A  VF  +   D+VSW  ++   V  +    AL+L ++
Sbjct: 120 ASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVRE 179

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI------KMEIKSDPIVGVGLVDM 241
           M+   +  +     S +     +   + GR +H  ++      KME+     +   L+DM
Sbjct: 180 MQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVS----MTTALIDM 235

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y K G +  A+ +F  + ++++++W ++I+G +++    E A  F  M  E +  ++ TL
Sbjct: 236 YCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +++        + + K  HA  ++  F     +V +LID YGKCG V  A  +F     
Sbjct: 296 LSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKK 355

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D+   + +I+AYA     ++   L++EM + ++ P++    SLL+ CA   A + GK  
Sbjct: 356 KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWT 415

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H +I + G   D     +L+NMYAKCG +  A   F+E   R I  W+ M+ G + HG G
Sbjct: 416 HAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCG 475

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KEAL++F +M   GV PN IT VS+  AC+H+GL+                    EHY C
Sbjct: 476 KEALELFSEMESHGVEPNDITFVSIFHACSHSGLM--------------------EHYGC 515

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++D+LGRAG   EA  +++ MP + N  +WGALL A +++KN+ +G+ AA  +  ++P+ 
Sbjct: 516 LVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQN 575

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
               VL SNIYASA  W++V  VR  M  + +KKEPG+SWIEV   V+ F  GD++  ++
Sbjct: 576 CGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQT 635

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
            ++Y  + E+   L ++GY P     L +++E EKE  L +HSEKLA AFGLI+T PG  
Sbjct: 636 TKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTP 695

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IR+ KNLRIC DCH + + +SKI  R IIVRD NRFHHF  G CSC GYW
Sbjct: 696 IRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 261/556 (46%), Gaps = 47/556 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC       LG ++HG     GF SD FV N+L+ MY KCG  + +R +FD +PER 
Sbjct: 94  LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERD 153

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++  CYV      EA+   +EM   G++ +  +L S+I       D   GR +HG
Sbjct: 154 VVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG 213

Query: 121 YSIKLGYDSDM--FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           Y ++   D  M      AL+DMY K G L  A  +F  +    +VSW  +IAGC+     
Sbjct: 214 YIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL 273

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           D   K F +M   ++ PN  T  S +  C  +   +LG+  H  L++        +   L
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTAL 333

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY KCG +  AR +F+ + +K++  W+++IS +       +  +LF  M    V  + 
Sbjct: 334 IDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNN 393

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+ ++L   A   A+ + K  HA   +   E D  +  +LI+ Y KCG V  A  +F E
Sbjct: 394 VTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE 453

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           +   D+    +M+  ++  G G+EAL+L+ EM+   + P+     S+ +AC++    E  
Sbjct: 454 AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEH- 512

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
                    +G          LV++  + G +D+A      +P R   + W A++     
Sbjct: 513 ---------YG---------CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKL 554

Query: 478 HGR-------GKEALQMFGQMLEDGVLPNHI--------TLVSVLCACNHAGL------- 515
           H          ++ L++  Q     VL ++I         + SV  A +H+G+       
Sbjct: 555 HKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLS 614

Query: 516 ---VAEAKHHFESMEK 528
              V+ + HHF+S +K
Sbjct: 615 WIEVSGSVHHFKSGDK 630


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/706 (36%), Positives = 393/706 (55%), Gaps = 53/706 (7%)

Query: 84  FKEMVLSGIRPNEFSL-----SSMINACAGSGDSLLGRKIHGYSIKLG--------YDS- 129
           + ++VL  +R NE +      S M +      DS L  ++     K G        +D  
Sbjct: 25  YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84

Query: 130 ---DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
              D+FS NAL+  YAK G++++  A F  +   D VS+N  IAG   +     +L+LF+
Sbjct: 85  LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M+     P  +T  S L A A +     G+Q+H S+I      +  +   L DMYAKCG
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +++AR +F  + +KNL++WN++ISG+ +NG   +   L   M   G   DQ T+ST+  
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI-- 262

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                                            I AY +CG V++A ++F E    D+V 
Sbjct: 263 ---------------------------------IAAYCQCGRVDEARRVFSEFKEKDIVC 289

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T+M+  YA+ G  E+AL L+ EM    I PDS+  SS++++CA L++   G+ VH   I
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
             G  ++    ++L++MY+KCG IDDA   F+ +P R +VSW+AMI G AQ+G  K+AL+
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F  ML+    P+++T + +L AC H   + + + +F+S+  + G+ P  +HYACM+++L
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GR G+ ++A+ L+  M    +  +W  LL       ++   + AA  LF ++P  +  ++
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           +LSN+YAS G W +VA VR  MK   +KK  G SWIE+ ++V+ FT  DR+H  S++IY 
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYE 589

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG-ATIRVK 725
           KL+ +   L + G+ P     LHDV E EK + +  HSEKLA+AFGLI  P G + IR+ 
Sbjct: 590 KLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRII 649

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KN+RIC DCH   +F S+I+ R+II+RD NRFHHF  G CSC   W
Sbjct: 650 KNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 240/532 (45%), Gaps = 103/532 (19%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL---------- 77
           +D F+ N L+ +YAK G   D++ LFD + +R + SWN+L S Y     +          
Sbjct: 56  TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRM 115

Query: 78  ---------------------EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
                                +E++  FK M   G  P E+++ S++NA A   D   G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGK 175

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IHG  I   +  ++F  NAL DMYAK G +E A  +F  +   ++VSWN +I+G   + 
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             +  + L  QM+ S   P+  T ++ + A                              
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------------ 265

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                Y +CG +DEAR +F    EK+++ W  ++ G+ +NG + +A  LF  M  E +  
Sbjct: 266 -----YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEP 320

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  TLS+V+ S A   ++   + VH  S+     ++  + ++LID Y KCG ++DA  +F
Sbjct: 321 DSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 ++V+  +MI   AQ G  ++AL+L+  M  ++  PD+     +L+AC + +  E
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QG++                 +S+ N +    ++D                ++ M+  L 
Sbjct: 441 QGQEYF---------------DSITNQHGMTPTLD---------------HYACMVNLLG 470

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE----AKHHFE 524
           + GR ++A+ +   M  D   P+ +   ++L  C+  G +      A+H FE
Sbjct: 471 RTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 205/454 (45%), Gaps = 73/454 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A     DL  G Q+HG ++   F  + F+ N+L  MYAKCG    +R LFD + +++
Sbjct: 161 ILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKN 220

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN + S Y      E+ +    +M LSG  P++ ++S++I A               
Sbjct: 221 LVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------- 265

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y + G +++A  VF + +  DIV W A++ G   +   + 
Sbjct: 266 --------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREED 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M    I P+ +T +S + +CA +     G+ +H   I   + ++ +V   L+D
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG +D+AR +F+LMP +N+++WN +I G  QNG D +A  LF  M ++    D  T
Sbjct: 366 MYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L +            +H   ++   E  D I N     +G              + 
Sbjct: 426 FIGILSAC-----------LHCNWIEQGQEYFDSITNQ----HGM-------------TP 457

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            +D  AC  M+    + G  E+A+ L   M     +PD  + S+LL+ C+        + 
Sbjct: 458 TLDHYAC--MVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKGDIVNAEV 512

Query: 421 VHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDD 452
              H+ +   +  T A     L NMYA  G   D
Sbjct: 513 AARHLFE---LDPTIAVPYIMLSNMYASMGRWKD 543


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/644 (38%), Positives = 381/644 (59%), Gaps = 6/644 (0%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D F A+AL  +Y  +  ++ A  VF  +  PD V WN ++AG    E    A++ F +M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSE----AVESFARMV 203

Query: 190 -SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
               + P+  T  S L A A +    +GR +H    K  +     V  GL+ +Y+KCG +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           + AR +F +M + +L+A+N +ISG+  NG    + +LF  +   G+  + +TL  ++   
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           + F    + + +H   +K+ F ++  +  ++   + +   +E A K F       + +  
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +MI+ YAQ GL E A+ L+ +M    + P+    SS L+ACA L A   GK +H  I + 
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
               + +   +L++MYAKCGSI +A R F+ + ++ +VSW+AMI G   HG+G EAL+++
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             ML+  +LP   T +SVL AC+H GLV E    F SM   + I P  EH  CM+D+LGR
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGR 563

Query: 549 AGKFQEAMELVDTMPFQA-NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           AG+ +EA EL+   P  A    VWGALLGA  ++K+ ++ + A++ LF ++PE S  +VL
Sbjct: 564 AGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVL 623

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN++ S   +   A VR+  K  KL K PG + IE+ +K + F  GDR+H +S+ IY+ 
Sbjct: 624 LSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSY 683

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L++++  + +AGY P  E  L+DVEE EKE ++  HSEKLA+AFGL++T PG  IR+ KN
Sbjct: 684 LEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKN 743

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR+C+DCH + +FISK+  R I+VRD +RFHHFR+G CSCG YW
Sbjct: 744 LRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 232/460 (50%), Gaps = 20/460 (4%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D FVA++L  +Y        +R++FD +P    V WN+L +         EAV  F  MV
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMV 203

Query: 89  LSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
             G +RP+  +L+S++ A A   D  +GR +H ++ K G          L+ +Y+K G++
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
           E A  +F  +E PD+V++NA+I+G  ++     ++ LF ++ +  + PN  T  + +   
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +      L + LH  ++K    ++  V   +  ++ +   M+ AR  F  MPEK + +WN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +ISG+ QNG    A +LF  M +  V  +  T+S+ L + A   A+ + K +H +  + 
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             E + Y++ +LID Y KCG + +A +IF      ++V+  +MI  Y   G G EALKLY
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------L 440
            +M D  + P S    S+L AC++    E+G +V      F  M+D +A N        +
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKV------FRSMTDDYAINPGIEHCTCM 557

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVS--WSAMIGGLAQH 478
           V++  + G + +A    SE P   +    W A++G    H
Sbjct: 558 VDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVH 597



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 190/370 (51%), Gaps = 23/370 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A     D+ +G  VH      G    E V   L+ +Y+KCG+   +R LFD + +  
Sbjct: 218 VLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPD 277

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V++N+L S Y     +  +V  F E++  G+ PN  +L ++I   +  G  LL + +HG
Sbjct: 278 LVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHG 337

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G+ ++   + A+  ++ ++ ++E A   F  +    + SWNA+I+G   +   + 
Sbjct: 338 FVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEM 397

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF+QM    + PN  T +S L ACA +    LG+ LH  + + +++ +  V   L+D
Sbjct: 398 AVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALID 457

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ EAR IF+ M  KN+++WN +I+G+  +G   EA  L+  M    +     T
Sbjct: 458 MYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSAT 517

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIVNS-------LIDAYGKCGH 348
             +VL + +           H   V+  ++     +DDY +N        ++D  G+ G 
Sbjct: 518 FLSVLYACS-----------HGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566

Query: 349 VEDAVKIFKE 358
           +++A ++  E
Sbjct: 567 LKEAFELISE 576



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 157/368 (42%), Gaps = 16/368 (4%)

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVI 270
           L+ L + L  SL       DP     L+  YA           +F   P  +    N + 
Sbjct: 31  LRHLDQILAVSLASGHYPLDPAPATSLLLRYASLRAPTGHLLRLFRGFPRPDRFLRNAL- 89

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
              L++   +    LFP        F  T+L+ +        +    + +HAL+V   + 
Sbjct: 90  ---LRSLPSLRPRLLFPCPDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYA 146

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           +D ++ ++L   Y     V+ A K+F    + D V   +++   +    G EA++ +  M
Sbjct: 147 ADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARM 202

Query: 391 Q-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
             D  + PD+   +S+L A A ++    G+ VH    K G          L+++Y+KCG 
Sbjct: 203 VCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++ A   F  +    +V+++A+I G + +G    ++ +F +++  G+ PN  TLV+++  
Sbjct: 263 VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322

Query: 510 CNHAG--LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            +  G  L+A+  H F     K G          +  +  R    + A +  DTMP +  
Sbjct: 323 HSPFGHDLLAQCLHGF---VLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTM 379

Query: 568 ASVWGALL 575
            S W A++
Sbjct: 380 ES-WNAMI 386


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/682 (36%), Positives = 401/682 (58%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+C +   + LG  VH      G  +D +V ++LV MYA  G   ++R  FD IPER 
Sbjct: 147 VVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERD 206

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN +    +    ++ AV  F+ M  SG  PN  +L+  ++ CA   D L G ++H 
Sbjct: 207 CVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHS 266

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G + ++  AN L+ MYAK   L+DA  +F+ +   D+V+WN +I+GCV +     
Sbjct: 267 LAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVE 326

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF  M+ S   P+  T  S L A   +   + G+++H  +++  +  D  +   LVD
Sbjct: 327 AFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVD 386

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC  +  A+ ++      +++  + +ISG++ NG   EA  +F ++  + +  +  T
Sbjct: 387 IYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVT 446

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL   AS  A+ + +Q+H   ++ A+E   Y+ ++L+D Y KCG ++ +  IF + S
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS 506

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   SMI++++Q G  +EAL L+ +M    I  ++   S+ L+ACA+L A   GK+
Sbjct: 507 QKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKE 566

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   IK    +D FA ++L++MYAKCG+++ A R F  +PD+  VSW+++I     HG 
Sbjct: 567 IHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGL 626

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE++ +   M E+G  P+H+T ++++ AC HAGLV E    F+ M KK+ I P  EH+A
Sbjct: 627 VKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFA 686

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+  R+GK  +A++ +  MPF+ +A +WGALL A R+++NVE+   A++ LF ++P 
Sbjct: 687 CMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPA 746

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VL+SNI A AG WD V+KVRR MKDNK+ K PG SW++V +  + F   D+SH  
Sbjct: 747 NSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPE 806

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           S++IY  L  +   L + GYVP
Sbjct: 807 SEDIYTSLKTLLQELREEGYVP 828



 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 182/586 (31%), Positives = 309/586 (52%), Gaps = 12/586 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE---FVANSLVVMYAKCGNFIDSRRLFDAIP 57
           VL+ C S   L LGLQ+H   V +G  SD     +   L+ MY     F D+  +F A+P
Sbjct: 38  VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 58  ERSVVS---WNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDS 112
             +  S   WN L   +        AV F+ +M    +   P+  +L  ++ +CA  G  
Sbjct: 98  RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            LGR +H  +  +G  +D++  +ALV MYA  G L +A   F  I   D V WN ++ GC
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           +     D A++LF+ M++S   PN  T    L  CA       G QLH   +K  ++ + 
Sbjct: 218 IKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEV 277

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            V   L+ MYAKC  +D+A  +F LMP+ +L+ WN +ISG +QNG  +EA  LF  M R 
Sbjct: 278 AVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRS 337

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G   D  TL ++L ++     +   K+VH   V+     D ++V++L+D Y KC  V  A
Sbjct: 338 GARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMA 397

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             ++  + A+D+V  ++MI+ Y   G+ EEAL+++  + ++ I P++   +S+L  CA++
Sbjct: 398 QNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASM 457

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +A   G+Q+H ++++  +    +  ++L++MYAKCG +D +   F ++  +  V+W++MI
Sbjct: 458 AALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMI 517

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFG 531
              +Q+G+ +EAL +F QM  +G+  N+IT+ + L AC     +   K  H  +++    
Sbjct: 518 SSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIK 577

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                E  + +ID+  + G  + A+ + + MP   N   W +++ A
Sbjct: 578 ADIFAE--SALIDMYAKCGNLELALRVFEFMP-DKNEVSWNSIISA 620



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 261/577 (45%), Gaps = 48/577 (8%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSD---MFSANALVDMYAKVGNLEDAVAVFK 155
           L +++  C  +    LG +IH  ++  G  SD   +     L+ MY       DAVAVF 
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 156 DIEHPDIVS---WNAVIAGCVLHEHNDWALKLFQQMKS--SEINPNMFTYTSALKACAGM 210
            +      S   WN +I G      +  A+  + +M S  +  +P+  T    +K+CA +
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               LGR +H +   + + +D  VG  LV MYA  G +  AR  F  +PE++ + WN+++
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
            G ++ G    A  LF  M   G   +  TL+  L   A+   +    Q+H+L+VK   E
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            +  + N+L+  Y KC  ++DA ++F+     DLV    MI+   Q GL  EA  L+ +M
Sbjct: 275 PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM 334

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q     PDS    SLL A  +L+  +QGK+VH +I++     D F  ++LV++Y KC  +
Sbjct: 335 QRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDV 394

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             A   +       +V  S MI G   +G  +EALQMF  +LE  + PN +T+ SVL  C
Sbjct: 395 RMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGC 454

Query: 511 NHAGLVA--------------EAKHHFES----MEKKFGIQPMQEH------------YA 540
                +               E K + ES    M  K G   +  +            + 
Sbjct: 455 ASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWN 514

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQA----NASVWGALLGAAR---IYKNVEVGQHAAEM 593
            MI    + GK QEA++L   M  +     N ++  AL   A    IY   E+  H   +
Sbjct: 515 SMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEI--HGVTI 572

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
              I+ +  +   L+ ++YA  G  +   +V  FM D
Sbjct: 573 KGPIKADIFAESALI-DMYAKCGNLELALRVFEFMPD 608


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/656 (40%), Positives = 384/656 (58%), Gaps = 7/656 (1%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           SL+S++N    S  S    +IH   I     S  F  N L+++YAK G+++  + +F   
Sbjct: 32  SLNSLLNC---SRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSA 88

Query: 158 --EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
             +  ++VSW ++I      +    AL  F  M+ S + PN +T+++ L AC        
Sbjct: 89  PDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVH 148

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G Q+H  + K    ++  V   LVDMYAKC  M  A  +F  MP +NL++WN +I G LQ
Sbjct: 149 GEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQ 208

Query: 276 NGGDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           N    +A   F  +  E +   D+ + S+V  + A+   +   KQVH +++K    +  Y
Sbjct: 209 NKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 268

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           I NSL D YGKCG   D  K+F  + A D+V    MI AY      E+A   +  M+ + 
Sbjct: 269 INNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKG 328

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
             PD    SS+L++CANL+A  QG  +H  II+ GF+ +    +SL+ MYAKCGS+ DA 
Sbjct: 329 SIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAF 388

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           + F E  DR +V W+A+I    QHG     +++F QML +G+ P++IT VSVL AC+H G
Sbjct: 389 QIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTG 448

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
            V E   +F SM K  GI P  EHYAC++D+L RAG+   A   ++ MP + +ASVWGAL
Sbjct: 449 RVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGAL 508

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           L A R + N+ +G+  A  LF +EP+    +VLL NI    GM +   +VRR M+   ++
Sbjct: 509 LSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVR 568

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           KEPG SWI++K+  Y FTV D+SH ++KEIY  L+++ +L+ K GYV   E  ++  EE 
Sbjct: 569 KEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAEEY 628

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
            KEQ L++HSEK+A+AFGL++ P GA IR+KKNLR C DCHT  +F S+I +REII
Sbjct: 629 -KEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 275/525 (52%), Gaps = 22/525 (4%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--RSVVSWNSLFSCYVH 73
           Q+H  ++ T   S  F+ N+L+ +YAKCG+   +  LF + P+  ++VVSW SL +    
Sbjct: 48  QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                +A+ FF  M  SG+ PN ++ S++++AC  +  S+ G ++H    K G+ +++F 
Sbjct: 108 FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFV 167

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +ALVDMYAK  ++  A  VF+++   ++VSWN +I G + ++  D A+  F+ +    +
Sbjct: 168 VSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENL 227

Query: 194 NP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
              +  +++S   ACA     E G+Q+H   +K+ + +   +   L DMY KCG  ++  
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVA 287

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F     ++++ WNI+I  ++ N    +A + F  M R+G   D+ + S+VL S A+  
Sbjct: 288 KLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLA 347

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+     +H   +++ F  +  + +SLI  Y KCG + DA +IF+E+   ++V  T++I 
Sbjct: 348 ALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIA 407

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-----KQVHVHIIK 427
           A  Q G     ++L+ +M    I PD     S+L+AC++    E+G       + VH I 
Sbjct: 408 ACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIY 467

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKE 483
            G   + +A   +V++ ++ G +D A R    +P +   S W A++     H     GKE
Sbjct: 468 PG--HEHYA--CIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKE 523

Query: 484 -ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
            AL++F   LE     N++ L ++L      G++ EA      ME
Sbjct: 524 VALKLFD--LEPDNPGNYVLLCNIL---TRNGMLNEADEVRRKME 563



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 234/469 (49%), Gaps = 41/469 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT       G Q+H +V   GF ++ FV ++LV MYAKC + + + ++F+ +P R+
Sbjct: 136 VLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRN 195

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIH 119
           +VSWN++   ++     ++A+ FFK ++L  +   +E S SS+ +ACA +G+   G+++H
Sbjct: 196 LVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVH 255

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G ++KLG  + ++  N+L DMY K G   D   +F +    D+V+WN +I   V + + +
Sbjct: 256 GVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYE 315

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A   F  M+     P+  +Y+S L +CA +     G  +H  +I+     +  V   L+
Sbjct: 316 DACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLI 375

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MYAKCGS+ +A  IF    ++N++ W  +I+   Q+G       LF  M REG+  D  
Sbjct: 376 TMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYI 435

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG-KCGHVEDAVKIFKE 358
           T  +VL + +           H   V+  F    +  NS+I  +G   GH   A      
Sbjct: 436 TFVSVLSACS-----------HTGRVEEGF----FYFNSMIKVHGIYPGHEHYAC----- 475

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
              VDL++    +          +  K ++E+    I PD+ V  +LL+AC N S    G
Sbjct: 476 --IVDLLSRAGEL----------DRAKRFIELM--PIKPDASVWGALLSACRNHSNLIMG 521

Query: 419 KQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           K+V + +  F    D   GN   L N+  + G +++AD    ++   G+
Sbjct: 522 KEVALKL--FDLEPDN-PGNYVLLCNILTRNGMLNEADEVRRKMESIGV 567


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/671 (35%), Positives = 376/671 (56%), Gaps = 36/671 (5%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INP 195
            + +Y+  G+L+ A  +F  I  PD+ +W  +I+    H  +  A++ +   +    + P
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +     S  KACA +      +++H   I+    SD ++G  L+DMY KC   + AR++F
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MP +++I+W  + S ++  G   EA   F  M   G   +  T+S++L +    + + 
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY- 374
             ++VH   V+     + ++ ++L++ Y  C  +  A  +F   S  D V+   +ITAY 
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 375 ----------------------------------AQFGLGEEALKLYLEMQDREINPDSF 400
                                              Q G  E+AL++   MQ+    P+  
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+L AC NL +   GKQ+H +I +  F  D     +LV MYAKCG ++ + R FS +
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R  VSW+ MI   + HG G+EAL +F +M++ GV PN +T   VL  C+H+ LV E  
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
             F+SM +   ++P  +H++CM+D+L RAG+ +EA E +  MP +  A  WGALLG  R+
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           YKNVE+G+ AA  LF IE +    +VLLSNI  SA +W   ++ R+ M+D  + K PG S
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLL 700
           WI+V+++V+TF VGD+S+ +S EIY  LD + + +  AGY+P  +  L DV++ EKE++L
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616

Query: 701 YHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF 760
            +HSEKLAVAFG++     ++IRV KNLRIC DCH + +F++KIV  +IIVRD  RFHHF
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHF 676

Query: 761 RNGSCSCGGYW 771
           R+G CSC  +W
Sbjct: 677 RDGLCSCQDFW 687



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 217/452 (48%), Gaps = 42/452 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC S +D+    +VH   +  GF SD  + N+L+ MY KC     +R +F+ +P R 
Sbjct: 84  VAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRD 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW S+ SCYV+C  L EA+  F++M L+G RPN  ++SS++ AC    D   GR++HG
Sbjct: 144 VISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHG 203

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV----------------- 163
           + ++ G   ++F ++ALV+MYA   ++  A  VF  +   D V                 
Sbjct: 204 FVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEK 263

Query: 164 ------------------SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
                             SWNAVI GC+ +   + AL++  +M++S   PN  T TS L 
Sbjct: 264 GLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLP 323

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           AC  +E    G+Q+H  + +     D      LV MYAKCG ++ +R +F +M +++ ++
Sbjct: 324 ACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVS 383

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV-HALS 324
           WN +I     +G   EA  LF  M   GV  +  T + VL   +  + +     +  ++S
Sbjct: 384 WNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMS 443

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLG 380
              + E D    + ++D   + G +E+A +  K    E +A    A       Y    LG
Sbjct: 444 RDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELG 503

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             A     E++    NP ++V  S +   A L
Sbjct: 504 RIAANRLFEIESD--NPGNYVLLSNILVSAKL 533



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 238/492 (48%), Gaps = 60/492 (12%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           +A   + +Y+  G+   +R LFD IP+  + +W  L S         EA+ ++ +     
Sbjct: 13  LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72

Query: 92  -IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
            + P++  L S+  ACA   D +  +++H  +I+ G+ SD+   NAL+DMY K    E A
Sbjct: 73  CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGA 132

Query: 151 VAVFKDIEHPDIVSWNAVIAGC-----VLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
             VF+ +   D++SW + +A C     +L E    AL  F++M  +   PN  T +S L 
Sbjct: 133 RLVFEGMPFRDVISWTS-MASCYVNCGLLRE----ALGAFRKMGLNGERPNSVTVSSILP 187

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           AC  ++  + GR++H  +++  +  +  V   LV+MYA C S+ +A+++F  M  ++ ++
Sbjct: 188 ACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVS 247

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGF----------------------------- 296
           WN++I+ +  N    +  S+F  M  EGVG                              
Sbjct: 248 WNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQ 307

Query: 297 ------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
                 +Q T+++VL +  + +++   KQ+H    +  F  D     +L+  Y KCG +E
Sbjct: 308 NSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLE 367

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            + ++F   +  D V+  +MI A +  G GEEAL L+ EM D  + P+S   + +L+ C+
Sbjct: 368 LSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCS 427

Query: 411 NLSAYEQGKQVHVHIIKFGFMS-------DTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           +    ++G      ++ F  MS       D    + +V++ ++ G +++A     ++P  
Sbjct: 428 HSRLVDEG------LLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIE 481

Query: 464 GIV-SWSAMIGG 474
               +W A++GG
Sbjct: 482 PTAGAWGALLGG 493



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 188/399 (47%), Gaps = 38/399 (9%)

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           L K+     P + +  + +Y+  G +  AR +F  +P+ +L  W I+IS   ++G  +EA
Sbjct: 2   LSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEA 61

Query: 283 ASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
              +  + ++  V  D+  L +V K+ AS + +   K+VH  +++  F SD  + N+LID
Sbjct: 62  IQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALID 121

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
            YGKC   E A  +F+     D+++ TSM + Y   GL  EAL  + +M      P+S  
Sbjct: 122 MYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVT 181

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            SS+L AC +L   + G++VH  +++ G   + F  ++LVNMYA C SI  A   F  + 
Sbjct: 182 VSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS 241

Query: 462 DRGIV-----------------------------------SWSAMIGGLAQHGRGKEALQ 486
            R  V                                   SW+A+IGG  Q+GR ++AL+
Sbjct: 242 RRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALE 301

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +  +M   G  PN IT+ SVL AC +   +   K     + + +  Q +    A ++ + 
Sbjct: 302 VLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTA-LVFMY 360

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
            + G  + +  +   M  +   S W  ++ A  ++ N E
Sbjct: 361 AKCGDLELSRRVFSMMTKRDTVS-WNTMIIATSMHGNGE 398


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/572 (41%), Positives = 357/572 (62%), Gaps = 4/572 (0%)

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIK-SDPIVGVGLV-DMYAKCGSMDEARMIFHLMP 259
           S L+ CA  + K   +Q+H   I+  +  ++P +G  L+  + +    M  A  +F ++ 
Sbjct: 22  SLLQFCASSKHKL--KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIH 79

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
             N+  WN +I G+ ++     A   +  M    V  D  T   +LK+++    +   + 
Sbjct: 80  NPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEA 139

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H+++++  FES  ++ NSL+  Y  CG  E A K+F+     DLVA  SMI  +A  G 
Sbjct: 140 IHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGR 199

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
             EAL L+ EM    + PD F   SLL+A A L A E G++VHV+++K G   ++   NS
Sbjct: 200 PNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNS 259

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L+++YAKCG+I +A R FSE+ +R  VSW+++I GLA +G G+EAL++F +M   G++P+
Sbjct: 260 LLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPS 319

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT V VL AC+H G++ E   +F  M+++ GI P  EHY CM+D+L RAG  ++A E +
Sbjct: 320 EITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYI 379

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             MP Q NA +W  LLGA  I+ ++ +G+ A   L  +EP+ S  +VLLSN+YAS   W 
Sbjct: 380 QNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWS 439

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +V  +RR M  + +KK PG S +E+ ++VY FT+GDRSH +S+++YA L+++++LL   G
Sbjct: 440 DVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEG 499

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           YVP     L D+EE EKEQ L +HSEK+A+AF L+ TPPG  IRV KNLR+C DCH + +
Sbjct: 500 YVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIK 559

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I+KI  REI++RD +RFHHFR GSCSC  YW
Sbjct: 560 LIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 211/436 (48%), Gaps = 44/436 (10%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGY---DSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           S++  CA S   L  ++IH +SI+ G    + DM   + +  + +    +  A  VF  I
Sbjct: 22  SLLQFCASSKHKL--KQIHAFSIRHGVSLNNPDM-GKHLIFTIVSLSAPMSYAYNVFTVI 78

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELG 216
            +P++ +WN +I G    ++   A   ++QM  S + P+  TY   LKA +  + ++E G
Sbjct: 79  HNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVRE-G 137

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
             +H   I+   +S   V   L+ +YA CG  + A  +F LM E++L+AWN +I+G   N
Sbjct: 138 EAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALN 197

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA +LF  M  EGV  D  T+ ++L + A   A+ + ++VH   +K     + ++ 
Sbjct: 198 GRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVT 257

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           NSL+D Y KCG + +A ++F E S  + V+ TS+I   A  G GEEAL+L+ EM+ + + 
Sbjct: 258 NSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLV 317

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P       +L AC++    ++G         F +            M  +CG I      
Sbjct: 318 PSEITFVGVLYACSHCGMLDEG---------FEYFR---------RMKEECGIIPR---- 355

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN---HA 513
                   I  +  M+  L++ G  K+A +    M    V PN +   ++L AC    H 
Sbjct: 356 --------IEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHL 404

Query: 514 GLVAEAKHHFESMEKK 529
           GL   A+ H  ++E K
Sbjct: 405 GLGEIARSHLLNLEPK 420



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 178/366 (48%), Gaps = 47/366 (12%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F  I   +V +WN++   Y   D    A  F+++MV+S + P+  +   ++ A + S +
Sbjct: 74  VFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
              G  IH  +I+ G++S +F  N+L+ +YA  G+ E A  VF+ ++  D+V+WN++I G
Sbjct: 134 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMING 193

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
             L+   + AL LF++M    + P+ FT  S L A A +   ELGR++H  L+K+ +  +
Sbjct: 194 FALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN 253

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
             V   L+D+YAKCG++ EA+ +F  M E+N ++W  +I G   NG   EA  LF  M  
Sbjct: 254 SHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEG 313

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           +G+   + T   VL                                    A   CG +++
Sbjct: 314 QGLVPSEITFVGVLY-----------------------------------ACSHCGMLDE 338

Query: 352 AVKIFKES-------SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
             + F+           ++   C  M+   ++ GL ++A   Y  +Q+  + P++ +  +
Sbjct: 339 GFEYFRRMKEECGIIPRIEHYGC--MVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRT 393

Query: 405 LLNACA 410
           LL AC 
Sbjct: 394 LLGACT 399



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 158/285 (55%), Gaps = 9/285 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA +   ++  G  +H + +  GF+S  FV NSL+ +YA CG+   + ++F+ + ER 
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ + +       EA+  F+EM + G+ P+ F++ S+++A A  G   LGR++H 
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHV 243

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K+G   +    N+L+D+YAK G + +A  VF ++   + VSW ++I G  ++   + 
Sbjct: 244 YLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEE 303

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG-L 238
           AL+LF++M+   + P+  T+   L AC+   + + G + +   +K E    P I   G +
Sbjct: 304 ALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFE-YFRRMKEECGIIPRIEHYGCM 362

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIV-----ISGHLQNG 277
           VD+ ++ G + +A      MP + N + W  +     I GHL  G
Sbjct: 363 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLG 407


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/686 (36%), Positives = 388/686 (56%), Gaps = 46/686 (6%)

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-------EH 159
           A  GD   GR++     K     +++  N +V  YAK+G+ ++++ +FK +       + 
Sbjct: 145 ATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 160 P-------------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           P             D++SWN++I+G V +   +  L +++QM    I+ ++ T  S L  
Sbjct: 201 PESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA      LG+ +H   IK   +        L+DMY+KCG +D A  +F  M E+N+++W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I+G+ ++G    A  L   M +EGV  D   ++++L + A   ++   K VH     
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              ES+ ++ N+L+D Y KCG +E A  +F      D+++  +MI               
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG-------------- 426

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
                  E+ PDS   + +L ACA+LSA E+GK++H +I++ G+ SD    N+LV++Y K
Sbjct: 427 -------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG +  A   F  IP + +VSW+ MI G   HG G EA+  F +M + G+ P+ ++ +S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+H+GL+ +    F  M+  F I+P  EHYACM+D+L R G   +A E ++T+P   
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAP 599

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
           +A++WGALL   R Y ++E+ +  AE +F +EPE +  +VLL+NIYA A  W+ V ++R 
Sbjct: 600 DATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLRE 659

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDR-SHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
            +    L+K PG SWIE+K KV  F  G+  SH  SK I + L ++   + + G+ P  +
Sbjct: 660 KIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTK 719

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             L + +E +KE  L  HSEKLA+AFGL+  PP  TIRV KNLR+C DCH   +F+SK  
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI++RD NRFHHF++G CSC G+W
Sbjct: 780 RREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 286/609 (46%), Gaps = 86/609 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K    G +VH I+       D  +   LV  YA CG+  + RR+FD + +++
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI---RPNE-------------FSLSSMIN 104
           V  WN + S Y      +E++C FK MV  GI   RP                S +SMI+
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224

Query: 105 A-----------------------------------CAGSGDSLLGRKIHGYSIKLGYDS 129
                                               CA SG   LG+ +H  +IK  ++ 
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            +  +N L+DMY+K G+L+ A+ VF+ +   ++VSW ++IAG      +D A+KL QQM+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +  ++   TS L ACA     + G+ +H  +    ++S+  V   L+DMYAKCGSM+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M  K++I+WN +I       G+++               D  T++ VL + A
Sbjct: 405 AANSVFSTMVVKDIISWNTMI-------GELKP--------------DSRTMACVLPACA 443

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  A+   K++H   ++  + SD ++ N+L+D Y KCG +  A  +F    + DLV+ T 
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI  Y   G G EA+  + EM+D  I PD     S+L AC++    EQG +   +I+K  
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIMKND 562

Query: 430 FMSDTFAGN--SLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEA 484
           F  +    +   +V++ ++ G++  A      +   PD  I  W A++ G   +   + A
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATI--WGALLCGCRNYHDIELA 620

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-MI 543
            ++  ++ E   L    T   VL A  +A   AE     + + +K G Q ++++  C  I
Sbjct: 621 EKVAERVFE---LEPENTGYYVLLANIYAE--AEKWEEVKRLREKIGKQGLRKNPGCSWI 675

Query: 544 DILGRAGKF 552
           +I G+   F
Sbjct: 676 EIKGKVNLF 684


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/726 (35%), Positives = 424/726 (58%), Gaps = 29/726 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C+  ++  LG Q+HGI +  G+D+D    ++L+ MYAKC    +S  +F A+P+++
Sbjct: 187 ILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKN 246

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SW+++ +  V  +FL+  +  FKEM   G+  ++   +S++ +CA   D  LG ++H 
Sbjct: 247 WISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHA 306

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  +  D     A +DMYAK  N++DA  +F   E+ ++ S+NA+I G    ++   
Sbjct: 307 HALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFR 366

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF+++  S +  +  + + AL+ACA ++    G QLH    K     +  V    +D
Sbjct: 367 ALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFID 426

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KC ++DEA  +F  M  K+ ++WN +I+ H QN    +  ++   M R G+  D+ T
Sbjct: 427 MYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYT 486

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI----- 355
             +VLK+ A   ++    ++H   VK    S+ YI +SL+D Y KCG +++A KI     
Sbjct: 487 FGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIF 545

Query: 356 ---------------FKESSAVD-------LVACTSMITAYAQFGLGEEALKLYLEMQDR 393
                           +E   +        +V+  ++I+ Y      E+A + +  M + 
Sbjct: 546 IGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEM 605

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            I PD F  S++L+ CANL++   GKQ+H H+IK     D +  ++LV+MY+KCG++ D+
Sbjct: 606 GITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDS 665

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
              F + P R  V+W+AMI G A HG G+EA+++F  M+   ++PNH T VS+L AC H 
Sbjct: 666 RLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHM 725

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           GLV     +F  M+K++G+ P  EHY+ M+DILG++G+ ++A+EL+  MPF+A+  +W  
Sbjct: 726 GLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRT 785

Query: 574 LLGAARIYK-NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           LL A +I + NVE  + AA  L  ++P+ SST++LLSNIYA AGMWD  +++R  M+ +K
Sbjct: 786 LLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDK 845

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           LKKEPG SW+E++D+ +TF VGD++H R KEIY  L  + + +N +    MVE      E
Sbjct: 846 LKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEMNLSVGGTMVEISGFYNE 905

Query: 693 ESEKEQ 698
             E++Q
Sbjct: 906 VFEQDQ 911



 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 191/635 (30%), Positives = 324/635 (51%), Gaps = 65/635 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V K C  ++   LG Q H  ++ +GF    FV+N L+ +Y  CGN   + +LFD +P R 
Sbjct: 55  VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114

Query: 61  VVSWNSLFSCYVHC-DFLEEAVCF------------------------------FKEMVL 89
           VVSWN++   Y    D +  ++CF                              F EM  
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGR 174

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           SG+  +  S S ++  C+   +  LG +IHG ++++GYD+D+ S +AL+DMYAK   L++
Sbjct: 175 SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDE 234

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           +  VF  +   + +SW+A+IAGCV +   D  LK+F++M+   +  +   Y S LK+CA 
Sbjct: 235 SFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCAT 294

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +    LG QLH   +K +   D IV    +DMYAKC +M +A+ +F +    NL ++N +
Sbjct: 295 LPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAM 354

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+G+ Q      A  LF  + +  +GFD+ +LS  L++ A+ + +    Q+H L+ K+ F
Sbjct: 355 ITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNF 414

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +  + N+ ID YGKC  +++A ++F E    D V+  ++I A+ Q     + L + + 
Sbjct: 415 SRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVS 474

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD +   S+L ACA   +   G ++H  I+K G  S+ + G+SLV+MY+KCG 
Sbjct: 475 MLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGM 533

Query: 450 IDDADR-------------AFSEIP----------DRG----IVSWSAMIGGLAQHGRGK 482
           ID+A++              +SE P          DR     IVSW+A+I G     + +
Sbjct: 534 IDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSE 593

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC- 541
           +A + F +M+E G+ P+  T  +VL  C +   +   K     + KK   +   + Y C 
Sbjct: 594 DAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK---ELQYDVYICS 650

Query: 542 -MIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++D+  + G   ++  + +  P + +   W A++
Sbjct: 651 TLVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMI 684



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 241/489 (49%), Gaps = 33/489 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + S +   CA      LG++ H + I  G+   +F +N L+ +Y   GNL  A  +F  +
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110

Query: 158 EHPDIVSWNAVI-------------------------------AGCVLHEHNDWALKLFQ 186
              D+VSWNA+I                               +G +    N  ++K+F 
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M  S +  +  +++  LK C+ +E  +LG Q+H   ++M   +D + G  L+DMYAKC 
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +DE+  +F+ MP+KN I+W+ +I+G +QN        +F  M + GVG  Q+  ++VLK
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S A+   + +  Q+HA ++K+ F  D  +  + +D Y KC +++DA ++F  S  ++L +
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             +MIT Y+Q   G  AL L+ ++    +  D    S  L ACA +    +G Q+H    
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLAT 410

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K  F  +    N+ ++MY KC ++D+A R F E+  +  VSW+A+I    Q+    + L 
Sbjct: 411 KSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLN 470

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +   ML  G+ P+  T  SVL AC  AG          +   K G+       + ++D+ 
Sbjct: 471 ILVSMLRSGMEPDEYTFGSVLKAC--AGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMY 528

Query: 547 GRAGKFQEA 555
            + G   EA
Sbjct: 529 SKCGMIDEA 537



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 191/411 (46%), Gaps = 35/411 (8%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS----------- 247
            ++   K CA     ELG+Q H  +I    +    V   L+ +Y  CG+           
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110

Query: 248 --------------------MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                               M  A + F +MP +++++WN ++SG LQ G ++E+  +F 
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M R GV FD  + S +LK  +  +   +  Q+H ++++  +++D    ++L+D Y KC 
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            ++++  +F      + ++ +++I    Q    +  LK++ EMQ   +     + +S+L 
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           +CA L     G Q+H H +K  F+ D     + ++MYAKC ++ DA R F    +  + S
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA-GLVAEAKHHFESM 526
           ++AMI G +Q   G  AL +F ++ +  +  + I+L   L AC    GL    + H  + 
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLAT 410

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +  F       +    ID+ G+     EA  + D M  + +A  W A++ A
Sbjct: 411 KSNFSRNICVAN--AFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAA 458


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 369/591 (62%), Gaps = 6/591 (1%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++    M+   +  +  TY+  +K C+     + G+++H  +     +    V   L++
Sbjct: 39  AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K   ++EA  +F  MPE+N+++W  +IS +     D +A      M+REGV  +  T
Sbjct: 99  MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLND-KALKCLILMFREGVRPNMFT 157

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+VL++      +   +Q+H   +KT  ESD ++ ++LID Y K   +++A+ +F E  
Sbjct: 158 YSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP 214

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV   S+I  +AQ   G EAL L+  M+      D    +S+L AC  L+  E G+Q
Sbjct: 215 TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQ 274

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VHVH++KF    D    N+L++MY KCGS++DA+ AFS + ++ ++SWS M+ GLAQ+G 
Sbjct: 275 VHVHVLKFD--QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGY 332

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            ++AL++F  M E G  PN+IT++ VL AC+HAGLV +  ++F SM+K FG+ P +EHY 
Sbjct: 333 SRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYG 392

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C+ID+LGRAG+  EA++L+  M  + ++  W  LLGA R+++NV++  +AA+ +  +EPE
Sbjct: 393 CLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPE 452

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            + T++LLSNIYA+   W++VA+VR+ M +  ++K PG SWIEV  +++ F +GD SH +
Sbjct: 453 DAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPK 512

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            +EI  +L+++ + +   GYVP     L D+E  +KE  L +HSEKLA+ FGL+      
Sbjct: 513 IEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREK 572

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+R++KNLRIC DCH   + +S++  R I++RD  R+HHF++G CSCG YW
Sbjct: 573 TVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 220/429 (51%), Gaps = 15/429 (3%)

Query: 57  PERSVVSWNSL---FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           P R V   + L   F+ + H   L  A+     M   G+  +  + S +I  C+  G   
Sbjct: 13  PLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQ 72

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            G+++H +    GY+  MF  N L++MY K   LE+A  +F ++   ++VSW  +I+   
Sbjct: 73  EGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISA-Y 131

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
            ++ ND ALK    M    + PNMFTY+S L+AC G  L  L RQLHC +IK  ++SD  
Sbjct: 132 SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDG--LPNL-RQLHCGIIKTGLESDVF 188

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V   L+D+Y+K   +D A  +F  MP ++L+ WN +I G  QN    EA +LF  M R G
Sbjct: 189 VRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAG 248

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              DQ TL++VL++      + + +QVH   +K  F+ D  + N+LID Y KCG +EDA 
Sbjct: 249 FLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDAN 306

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
             F      D+++ ++M+   AQ G   +AL+L+  M++    P+      +L AC++  
Sbjct: 307 SAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAG 366

Query: 414 AYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWS 469
             E+G      + K FG          L+++  + G +D+A +   E+   PD   V+W 
Sbjct: 367 LVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDS--VTWR 424

Query: 470 AMIGGLAQH 478
            ++G    H
Sbjct: 425 TLLGACRVH 433



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 248/514 (48%), Gaps = 70/514 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C+++  +  G +VH  +   G++   FV N+L+ MY K     ++  LFD +PER+
Sbjct: 61  LIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERN 120

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y +    ++A+     M   G+RPN F+ SS++ AC G  +    R++H 
Sbjct: 121 VVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHC 176

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G +SD+F  +AL+D+Y+K  +L++A+ VF ++   D+V WN++I G   +   + 
Sbjct: 177 GIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNE 236

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++MK +    +  T TS L+AC G+ L ELGRQ+H  ++K +   D I+   L+D
Sbjct: 237 ALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFD--QDLILNNALID 294

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS+++A   F  M EK++I+W+ +++G  QNG   +A  LF  M   G    +  
Sbjct: 295 MYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESG---SRPN 351

Query: 301 LSTVLKSVASFQAIGVCKQ--VHALSVKTAFESDD--YIVNSLIDAYGKCGHVEDAVKIF 356
             TVL  + +    G+ ++   +  S+K  F  D        LID  G+ G +++AVK+ 
Sbjct: 352 YITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLI 411

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-----AN 411
            E                                   E  PDS    +LL AC      +
Sbjct: 412 HEM----------------------------------ECEPDSVTWRTLLGACRVHRNVD 437

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----V 466
           L+ Y   K + +         D      L N+YA     +D       + +RGI      
Sbjct: 438 LAIYAAKKIIELE------PEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGC 491

Query: 467 SW-------SAMIGGLAQHGRGKEALQMFGQMLE 493
           SW          I G   H + +E +Q    ++E
Sbjct: 492 SWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIE 525


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/749 (35%), Positives = 415/749 (55%), Gaps = 88/749 (11%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           +N  +  + + G   D+ RLF A+P RS  ++N++ + Y     L  A   F+ +     
Sbjct: 41  SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP---- 96

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKI---------------------HG------YSIKL 125
           RP+ +S +++++A A S      R +                     HG      +   L
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
             + D  S N ++  Y + G +E+A  +F      D++SWNA+++G V       A +LF
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216

Query: 186 QQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
            +M   ++ + N+     A +     ++ E  R    + ++     D      +V  YA+
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRG----DMVEARRLFDAAPVR-----DVFTWTAVVSGYAQ 267

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G ++EAR +F  MPE+N ++WN +++ ++Q     EA  LF  M               
Sbjct: 268 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM--------------P 313

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            ++VAS+                         N+++  Y + G +E+A  +F      D 
Sbjct: 314 CRNVASW-------------------------NTMLTGYAQAGMLEEAKAVFDTMPQKDA 348

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVCSSLLNACANLSAYEQGKQVH 422
           V+  +M+ AY+Q G  EE L+L++EM      +N  +F C  +L+ CA+++A E G Q+H
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLH 406

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
             +I+ G+    F GN+L+ MY KCG+++DA  AF E+ +R +VSW+ MI G A+HG GK
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK 466

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           EAL++F  M      P+ ITLV VL AC+H+GLV +   +F SM   FG+    EHY CM
Sbjct: 467 EALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCM 526

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           ID+LGRAG+  EA +L+  MPF+ ++++WGALLGA+RI++N E+G+ AAE +F +EPE +
Sbjct: 527 IDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENA 586

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
             +VLLSNIYAS+G W +  K+R  M++  +KK PG SWIEV++KV+TF+ GD  H   +
Sbjct: 587 GMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKE 646

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           +IYA L+++   + KAGYV   +  LHDVEE EKE +L +HSEKLAVA+G++  PPG  I
Sbjct: 647 KIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPI 706

Query: 723 RVKKNLRICVDCHTSF----EFISKIVSR 747
           RV KNLR+C DCH +F    E + K+  R
Sbjct: 707 RVIKNLRVCGDCHNAFKAWIELMLKVSGR 735



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 209/469 (44%), Gaps = 55/469 (11%)

Query: 18  HGIVVFTG--FD----SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           HG+V      FD     D    N ++  Y + G   ++R LF++  E  V+SWN+L S Y
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 203

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V    + EA   F  M    +     S + M++  A  GD +  R++           D+
Sbjct: 204 VQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRL----FDAAPVRDV 255

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F+  A+V  YA+ G LE+A  VF  +   + VSWNA++A  +     D A +LF  M   
Sbjct: 256 FTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 315

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
               N+ ++ + L                                     YA+ G ++EA
Sbjct: 316 ----NVASWNTMLTG-----------------------------------YAQAGMLEEA 336

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           + +F  MP+K+ ++W  +++ + Q G   E   LF  M R G   +++  + VL + A  
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+    Q+H   ++  +    ++ N+L+  Y KCG++EDA   F+E    D+V+  +MI
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGF 430
             YA+ G G+EAL+++  M+     PD      +L AC++    E+G      +   FG 
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
            +       ++++  + G + +A     ++P +     W A++G    H
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/472 (21%), Positives = 202/472 (42%), Gaps = 68/472 (14%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++  +N  +  + + G + DA  +F  +      ++NA++AG   +     A  LF+ 
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +      P+ ++Y + L A A        R L     +M ++      V ++  +A  G 
Sbjct: 95  IP----RPDNYSYNTLLHALAVSSSLADARGL---FDEMPVRDSVTYNV-MISSHANHGL 146

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +  AR  F L PEK+ ++WN +++ +++NG   EA  LF         +D  + + ++  
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMSG 202

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
              +  +   +++           D    N ++  Y + G + +A ++F  +   D+   
Sbjct: 203 YVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTW 258

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T++++ YAQ G+ EEA +++  M +R          + ++  A ++AY Q + +      
Sbjct: 259 TAVVSGYAQNGMLEEARRVFDAMPER----------NAVSWNAMVAAYIQRRMMDEAKEL 308

Query: 428 FGFMS--DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           F  M   +  + N+++  YA+ G +++A   F  +P +  VSW+AM+   +Q G  +E L
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACN-----------HAGLV------------------ 516
           Q+F +M   G   N      VL  C            H  L+                  
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428

Query: 517 ------AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
                  +A++ FE ME++  +      +  MI    R G  +EA+E+ D M
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVS-----WNTMIAGYARHGFGKEALEIFDMM 475



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 7/214 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L  G+Q+HG ++  G+    FV N+L+ MY KCGN  D+R  F+ + ER 
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 448

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VVSWN++ + Y    F +EA+  F  M  +  +P++ +L  ++ AC+ SG  L+ + I +
Sbjct: 449 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG--LVEKGISY 506

Query: 120 GYSI--KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
            YS+    G  +       ++D+  + G L +A  + KD+   PD   W A++    +H 
Sbjct: 507 FYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR 566

Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           + +      +++   E  N  M+   S + A +G
Sbjct: 567 NPELGRSAAEKIFELEPENAGMYVLLSNIYASSG 600


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/658 (37%), Positives = 364/658 (55%), Gaps = 55/658 (8%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH  +IK G   +    N ++      + G++  A  +F  I  P + SWN +  G  
Sbjct: 31  KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                   + L+ +M    + P+ +TY    K        +LGR+LHC ++K  + S+  
Sbjct: 91  RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVF 150

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
               L++MY+ CG +D AR IF +  + +++ WN +ISG+                    
Sbjct: 151 AHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY-------------------- 190

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
                   + + K V S+ AI                         +  +   G V+ A 
Sbjct: 191 --------NRIKKDVISWTAI-------------------------VTGFVNTGQVDAAR 217

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F +    D V+ T+MI  Y +    +EAL L+ EMQ  +I PD F   S+L ACA L 
Sbjct: 218 KYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLG 277

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A E G+ +  +I K    +DTF GN+L++MY KCG+++ A   F+ +P R   +W+AM+ 
Sbjct: 278 ALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVV 337

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           GLA +G G+EAL MF QML+  V P+ +T V VL AC H G+V E K  F SM  + GI+
Sbjct: 338 GLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIE 397

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P   HY CM+D+LG+AG  +EA E++  MP + N+ VWGALLGA RI+K+ E+ + A E 
Sbjct: 398 PNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQ 457

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +  +EP   + +VL  NIYA+   WD + ++R+ M D  +KK PG S IE+   V+ F  
Sbjct: 458 ILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVA 517

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD+SH ++KEIY KL++++  L  AGY P       D+ E +KE  +Y HSEKLA+AFGL
Sbjct: 518 GDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGL 577

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I + PG TIR+ KNLR+C+DCH   + +SK+  RE+IVRD  RFHHFR+GSCSC  YW
Sbjct: 578 INSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 236/561 (42%), Gaps = 108/561 (19%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNS 66
           K ++   Q+H   + TG   +  + N ++      + G+   +R+LFD IPE SV SWN 
Sbjct: 25  KSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNI 84

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           +F  Y      +  V  + EM+   ++P+ ++   +      S    LGR++H + +K G
Sbjct: 85  MFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYG 144

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG--------------- 171
            DS++F+ NAL++MY+  G ++ A  +F      D+V+WNA+I+G               
Sbjct: 145 LDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIV 204

Query: 172 ------------------CVLHEHNDW---------------ALKLFQQMKSSEINPNMF 198
                                 +H  W               AL LF++M++S+I P+ F
Sbjct: 205 TGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEF 264

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           T  S L ACA +   ELG  +   + K ++K+D  VG  L+DMY KCG+++ A  IF+ +
Sbjct: 265 TMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTL 324

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P+++   W  ++ G   NG   EA ++F  M +  V  D+ T   VL +      +   K
Sbjct: 325 PQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGK 384

Query: 319 QVHA-LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           +  A ++ +   E +      ++D  GK GH+++A +I K                    
Sbjct: 385 KFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIK-------------------- 424

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
                         +  + P+S V  +LL AC      E  ++    I++     +   G
Sbjct: 425 --------------NMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILEL----EPNNG 466

Query: 438 NSLV---NMYAKCGSIDD--------ADRAFSEIPDRGIVSWSAM----IGGLAQHGRGK 482
              V   N+YA C   D          DR   + P   ++  + +    + G   H + K
Sbjct: 467 AVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTK 526

Query: 483 EALQMFGQMLED----GVLPN 499
           E      +M  D    G  PN
Sbjct: 527 EIYGKLNKMTSDLKIAGYSPN 547



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 146/320 (45%), Gaps = 50/320 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           + K  T    L LG ++H  VV  G DS+ F  N+L+ MY+ CG                
Sbjct: 120 LFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSD 179

Query: 45  --------------------------NFIDS------RRLFDAIPERSVVSWNSLFSCYV 72
                                      F+++      R+ F  +PER  VSW ++   Y+
Sbjct: 180 VVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYL 239

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
             +  +EA+  F+EM  S I+P+EF++ S++ ACA  G   LG  I  Y  K    +D F
Sbjct: 240 RLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTF 299

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             NAL+DMY K GN+E A+++F  +   D  +W A++ G  ++   + AL +F QM  + 
Sbjct: 300 VGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKAS 359

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEA 251
           + P+  TY   L AC    + + G++   S+         I   G +VD+  K G + EA
Sbjct: 360 VTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEA 419

Query: 252 RMIFHLMPEK-NLIAWNIVI 270
             I   MP K N I W  ++
Sbjct: 420 HEIIKNMPMKPNSIVWGALL 439



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 5/243 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L LG  +   +      +D FV N+L+ MY KCGN   +  +F+ +P+R 
Sbjct: 269 VLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W ++          EEA+  F +M+ + + P+E +   +++AC  +G    G+K   
Sbjct: 329 KFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFA 388

Query: 121 -YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             + + G + ++     +VD+  K G+L++A  + K++   P+ + W A++  C +H+  
Sbjct: 389 SMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDA 448

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A +  +Q+   E N N   Y       A     +  R+L   ++   IK  P  G  L
Sbjct: 449 EMAERAIEQILELEPN-NGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTP--GCSL 505

Query: 239 VDM 241
           ++M
Sbjct: 506 IEM 508


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/577 (42%), Positives = 356/577 (61%), Gaps = 5/577 (0%)

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           M  Y S L++C   +  E G+QLH  + ++ I  +P++   LV++Y  C S+  A ++F 
Sbjct: 1   MSYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD 60

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            + ++NL  WN++I G+  NG    A SL+  M   G+  D+ T   VLK+ ++  A+  
Sbjct: 61  RISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K++H   +++  ESD ++  +LID Y KCG VE A ++F +    D+V   SM+  Y+Q
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180

Query: 377 FGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            G  +E+L L   M    + P   +FV S  + A A+     QGK++H +  + GF S+ 
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVIS--IAASADNGLLPQGKELHGYSWRHGFESND 238

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
               +L++MYAK GS++ A   F  + ++ +VSW+AMI G A HG   EAL +F +M + 
Sbjct: 239 KVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KG 297

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            VLP+HIT V VL AC+H GL+ E K HF SM   F I P  +HY CMID+LG  G+ +E
Sbjct: 298 KVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEE 357

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           A +L+  M  + +A VWGALL + +I+ NVE+G+ A E L  +EP+    +V+LSN+YA 
Sbjct: 358 AYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQ 417

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
           AG WD VA++R  M +  LKK    SWIEV +KV+ F   D SH +S+ IYA+L     L
Sbjct: 418 AGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKL 477

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
           + +AGY P V +  HDVE+ EK  ++  HSE+LA+AFGLI+T  G  + + KNLRIC DC
Sbjct: 478 MKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDC 537

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + +FISKI  REI +RDVNR+HHF++G CSCG +W
Sbjct: 538 HVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 224/469 (47%), Gaps = 43/469 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C  +K +  G Q+H  +   G   +  +A  LV +Y  C +  ++  LFD I +R+
Sbjct: 7   LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN +   Y      E A+  + +M   G+ P++F+   ++ AC+       G+KIH 
Sbjct: 67  LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHK 126

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I+ G +SD+F   AL+DMYAK G +E A  VF  I+  D+V WN+++A    +   D 
Sbjct: 127 DVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDE 186

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L L + M  + + P   T+  ++ A A   L   G++LH    +   +S+  V   L+D
Sbjct: 187 SLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMD 246

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK GS++ AR +F L+ EK +++WN +I+G+  +G   EA  LF  M +  V  D  T
Sbjct: 247 MYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHIT 305

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI--VNSLIDAYGKCGHVEDAVKIFKE 358
              VL + +    +   K +H  S+ + F     +     +ID  G CG +         
Sbjct: 306 FVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRL--------- 355

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                                 EEA KL +EM+   + PD+ V  +LL++C      E G
Sbjct: 356 ----------------------EEAYKLIMEMR---VEPDAGVWGALLHSCKIHGNVEMG 390

Query: 419 KQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI 465
           +     +++   +     GN ++  NMYA+ G  D   R    + ++G+
Sbjct: 391 ELALEKLVE---LEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGL 436



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 202/402 (50%), Gaps = 10/402 (2%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           +S++ +C        G+++H    ++G   +   A  LV++Y    +L +A  +F  I  
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            ++  WN +I G   +   + A+ L+ QM+   + P+ FT+   LKAC+ +   E G+++
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  +I+  ++SD  VG  L+DMYAKCG ++ AR +F  + E++++ WN +++ + QNG  
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            E+ +L   M   G+   + T    + + A    +   K++H  S +  FES+D +  +L
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y K G V  A  +F+      +V+  +MIT YA  G   EAL L+ EM+ + + PD 
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPDH 303

Query: 400 FVCSSLLNACANLSAYEQGK-QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                +L AC++     +GK      I  F           ++++   CG +++A +   
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363

Query: 459 EI---PDRGIVSWSAMIGGLAQHGR---GKEALQMFGQMLED 494
           E+   PD G+  W A++     HG    G+ AL+   ++  D
Sbjct: 364 EMRVEPDAGV--WGALLHSCKIHGNVEMGELALEKLVELEPD 403


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/682 (35%), Positives = 398/682 (58%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK+C    DL LG+Q+H + V TG ++D    ++LV MY KC +  D+ R F  + ER+
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERN 216

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW +  +  V  +     +  F +M   G+  ++ + +S   +CA        R++H 
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK  + SD     A+VD+YAK GNL DA   F  + H ++ + NA++ G V       
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++LFQ M  S +  ++ + +    ACA ++    G Q+HC  +K     D  V   ++D
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++ EA ++F  M +++ ++WN +I+   QN    +  +    M R G+  D  T
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A  Q++     VH  ++K+    D ++ ++++D Y KCG + +A K+     
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIG 516

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             +LV+  S+I+ ++     EEA + + EM D  + PD F  +++L+ CANL+  E GKQ
Sbjct: 517 GQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQ 576

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK   + D +  ++LV+MYAKCG++ D+   F +      VSW+AMI G A HG+
Sbjct: 577 IHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQ 636

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL+MF +M    V+PNH T V+VL AC+H GL+ +   +F  M  ++ + P  EH+A
Sbjct: 637 GLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFA 696

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DILGR+   QEA+E + +MP +A+A VW  LL   +I ++VEV + AA  +  ++P+
Sbjct: 697 CMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPD 756

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +S ++LLSN+YA +G W +V++ RR M+  +L+KEPG SWIEV+ +++ F VGD+ H R
Sbjct: 757 DASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPR 816

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           SKE+Y  L+ +   +  +GY P
Sbjct: 817 SKEVYEMLNSLIGEMKLSGYEP 838



 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 188/588 (31%), Positives = 300/588 (51%), Gaps = 36/588 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L A   +  L  G   H  ++ +GF    FV+N L+ MYA+CG    +  +FD +P R  
Sbjct: 26  LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFK-------------------------------EMVLS 90
           VSWN++ + YVH    + A   F                                EM   
Sbjct: 86  VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+  +  +L+ ++ +C G  D  LG +IH  ++K G ++D+ + +ALVDMY K  +L+DA
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           +  F  +   + VSW A IAGCV +E     ++LF QM+   +  +   Y SA ++CA M
Sbjct: 206 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAM 265

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                 RQLH   IK    SD +VG  +VD+YAK G++ +AR  F  +P  N+   N ++
Sbjct: 266 PCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMM 325

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
            G ++ G   EA  LF +M R GVGFD  +LS V  + A  +      QVH L+VK+ F+
Sbjct: 326 VGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFD 385

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            D  + N+++D YGKC  + +A  +F+E    D V+  ++I A  Q    E+ +    EM
Sbjct: 386 VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEM 445

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
               + PD F   S+L ACA L + E G  VH   IK G   D F  +++V+MY KCG+I
Sbjct: 446 LRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAI 505

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            +A +    I  + +VSW+++I G +   + +EA + F +ML+ GV P+H T  +VL  C
Sbjct: 506 TEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTC 565

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAM 556
            +   +   K     + K+   + + + Y  + ++D+  + G   +++
Sbjct: 566 ANLATIELGKQIHGQIIKQ---EMLGDEYISSTLVDMYAKCGNMPDSL 610



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 258/525 (49%), Gaps = 24/525 (4%)

Query: 86  EMVLSGIRPNEF---SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA 142
            M++SG  P  F    L  M   C G+  +      HG    + +  D  S N ++  Y 
Sbjct: 44  RMLVSGFMPTTFVSNCLLQMYARCGGTAHA------HGVFDTMPH-RDTVSWNTMLTAYV 96

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
             G+ + A ++F  +  PD+VSWN +I+G   H     ++ L  +M    +  +  T   
Sbjct: 97  HAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAV 156

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            LK+C G++   LG Q+H   +K  +++D   G  LVDMY KC S+D+A   FH M E+N
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERN 216

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            ++W   I+G +QN        LF  M R G+G  Q   ++  +S A+   +   +Q+HA
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
            ++K  F SD  +  +++D Y K G++ DA + F      ++  C +M+    + GLG E
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           A++L+  M    +  D    S + +ACA +  Y QG QVH   +K GF  D    N++++
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           +Y KC ++ +A   F E+  R  VSW+A+I  L Q+   ++ +    +ML  G+ P+  T
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456

Query: 503 LVSVLCACN-----HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
             SVL AC        GLV     H ++++   G+       + ++D+  + G   EA +
Sbjct: 457 YGSVLKACAGLQSLEYGLVV----HGKAIKSGLGLDAFVS--STVVDMYCKCGAITEAQK 510

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQH-AAEML-FAIEPE 600
           L D +  Q   S W +++    + K  E  Q   +EML   ++P+
Sbjct: 511 LHDRIGGQELVS-WNSIISGFSLTKQSEEAQRFFSEMLDMGVKPD 554



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 206/441 (46%), Gaps = 45/441 (10%)

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           F++   L A AG      G+  H  ++         V   L+ MYA+CG    A  +F  
Sbjct: 20  FSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDT 79

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLF---------PW-------------------- 288
           MP ++ ++WN +++ ++  G    AASLF          W                    
Sbjct: 80  MPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLS 139

Query: 289 --MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             M R GV  D+TTL+ +LKS      + +  Q+HAL+VKT  E+D    ++L+D YGKC
Sbjct: 140 MEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKC 199

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
             ++DA++ F      + V+  + I    Q       ++L+++MQ   +       +S  
Sbjct: 200 RSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAF 259

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            +CA +      +Q+H H IK  F SD   G ++V++YAK G++ DA RAF  +P   + 
Sbjct: 260 RSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVE 319

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           + +AM+ GL + G G EA+Q+F  M   GV  + I+L  V  AC      AE K +F+ +
Sbjct: 320 TCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSAC------AEVKGYFQGL 373

Query: 527 EKK-FGIQPMQEHYAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
           +     ++   +   C    ++D+ G+     EA  +   M  Q ++  W A++ A    
Sbjct: 374 QVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAALEQN 432

Query: 582 KNVE-VGQHAAEMLFA-IEPE 600
           +  E    H  EML + +EP+
Sbjct: 433 ECYEDTIAHLNEMLRSGMEPD 453


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/657 (35%), Positives = 386/657 (58%), Gaps = 1/657 (0%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G  +HGY +K G+ +     NAL+  YAK   +EDA+ VF ++   DI+SWN++I GC  
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +   D A++LF +M       +  T  S + AC       +G  +H   ++  + S+  +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  L+DMY+ C        IF  M +KN+++W  +I+ + + G   + A LF  M  EG+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   +++ L + A  +++   K VH  +++   E    + N+L++ Y KCG++E+A  
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           IF   +  D ++  ++I  Y++  L  EA  L+ EM   ++ P++   + +L A A+LS+
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSS 301

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            E+G+++H + ++ G++ D F  N+LV+MY KCG++  A R F  + ++ ++SW+ MI G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HGRG++A+ +F QM   G+ P+  +  ++L AC+H+GL  E    F +M  +  I+P
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             +HYACM+D+L   G  +EA E ++TMP + ++S+W +LL   RI++NV++ +  AEM+
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F +EPE +  +VLL+NIYA A  W+ V K++  +    L++  G SWIEV+ K + F   
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           +R+H +   I   LD+V+  + + G+ P  +  L   +++  ++ L  HS KLAVAFG++
Sbjct: 542 NRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVL 601

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
               G  IRV KN R+C  CH + +FISK+  REII+RD NRFHHF  G CSC GYW
Sbjct: 602 NLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 286/547 (52%), Gaps = 19/547 (3%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           GL VHG +V  GF +   V N+L+  YAK     D+  +FD +P+R ++SWNS+      
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
               ++AV  F  M L G   +  +L S++ AC  S  S +G  +HGYS++ G  S+   
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            NAL+DMY+   +      +F+++E  ++VSW A+I       H D    LFQ+M    I
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P++F  TSAL A AG E  + G+ +H   I+  I+    V   L++MY KCG M+EAR 
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           IF  + +K+ I+WN +I G+ ++    EA +LF  M  + +  +  T++ +L + AS  +
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSS 301

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   +++HA +V+  +  D+++ N+L+D Y KCG +  A ++F   +  +L++ T MI  
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y   G G +A+ L+ +M+   I PD+   S++L AC++    ++G +    +     +  
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 434 TFAGNS-LVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
                + +V++    G++ +A      +   PD  I  W +++ G   H   K A ++  
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSI--WVSLLRGCRIHRNVKLAEKVAE 479

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK---KFGIQPMQEHYAC-MIDI 545
            + E  + P +     +L     A + AEA+  +E++ K   K G + ++E+  C  I++
Sbjct: 480 MVFE--LEPENTGYYVLL-----ANIYAEAE-RWEAVRKLKNKVGGRGLRENTGCSWIEV 531

Query: 546 LGRAGKF 552
            G+A  F
Sbjct: 532 RGKAHIF 538



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 170/305 (55%), Gaps = 1/305 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC      F+G  VHG  V TG  S+  + N+L+ MY+ C ++  + ++F  + +++
Sbjct: 91  VMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKN 150

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ + Y      ++    F+EM L GIRP+ F+++S ++A AG+     G+ +HG
Sbjct: 151 VVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHG 210

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y+I+ G +  +  ANAL++MY K G +E+A  +F  +   D +SWN +I G       + 
Sbjct: 211 YAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANE 270

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF +M   ++ PN  T    L A A +   E GR++H   ++     D  V   LVD
Sbjct: 271 AFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVD 329

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG++  AR +F ++  KNLI+W I+I+G+  +G   +A +LF  M   G+  D  +
Sbjct: 330 MYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGS 389

Query: 301 LSTVL 305
            S +L
Sbjct: 390 FSAIL 394


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/677 (37%), Positives = 383/677 (56%), Gaps = 4/677 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS---DMFSANALVDMYAKVGNLEDAVAVFK 155
           L+ ++  CA S    +G  IH + I     S   D +  N+L+++Y K      A  +F 
Sbjct: 34  LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKE 214
            +   ++VSW A++ G      +   LKLF+ M  S E  PN F  T   K+C+     E
Sbjct: 94  LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G+Q H   +K  + S   V   LV MY+ C    EA  +   +P  +L  ++  +SG+L
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           + G   E   +      E   ++  T  + L+  ++ + + +  QVH+  V+  F ++  
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
              +LI+ YGKCG V  A ++F ++ A ++   T+++ AY Q    EEAL L+ +M  +E
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           + P+ +  + LLN+ A LS  +QG  +H  ++K G+ +    GN+LVNMYAK GSI+DA 
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           +AFS +  R IV+W+ MI G + HG G+EAL+ F +M+  G +PN IT + VL AC+H G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
            V +  H+F  + KKF +QP  +HY C++ +L +AG F++A + + T P + +   W  L
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           L A  + +N  +G+  AE      P  S  +VLLSNI+A +  W+ VAKVR  M +  +K
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           KEPG+SWI ++++ + F   D  H     IYAK+ EV   +   GY P V    HDV+E 
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEE 633

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           ++E  L +HSEKLAVA+GLI TP  + + V KN+RIC DCH++ + ISKI  R I++RD 
Sbjct: 634 QREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDS 693

Query: 755 NRFHHFRNGSCSCGGYW 771
           NRFHHF +G CSC  YW
Sbjct: 694 NRFHHFLDGQCSCCDYW 710



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 234/480 (48%), Gaps = 6/480 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS---DEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +LK C +   L +G  +H  ++ T   S   D +  NSL+ +Y KC   + +R+LFD +P
Sbjct: 37  LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGR 116
           ER+VVSW ++   Y +  F  E +  FK M  SG  RPNEF  + +  +C+ SG    G+
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           + HG  +K G  S  F  N LV MY+      +A+ V  D+ + D+  +++ ++G +   
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
                L + ++  + +   N  TY S+L+  + +    L  Q+H  +++    ++     
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L++MY KCG +  A+ +F     +N+     ++  + Q+    EA +LF  M  + V  
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++ T + +L S+A    +     +H L +K+ + +   + N+L++ Y K G +EDA K F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              +  D+V   +MI+  +  GLG EAL+ +  M      P+      +L AC+++   E
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456

Query: 417 QGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           QG      ++ KF    D      +V + +K G   DA+      P +  +V+W  ++  
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/699 (36%), Positives = 396/699 (56%), Gaps = 43/699 (6%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGN---LEDAVAVFKDIEHPDIVSWNAVIAG 171
           G +IH  +I  G    +FS + L+  ++ +G+   L+ +  +F  I+ P++  WN +I G
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 172 CVLHEHNDWALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
               ++   A+ L+  M +  I  PN FT+   L +CA +   E G ++H  +IK   +S
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           D  V   L+ +Y+  G+++ AR +F     ++L+++N +I G+ +      A  LF  M 
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-------------- 336
             G+  D+ T   +    +      V KQ+HA   K     D  I+              
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL 264

Query: 337 --------------------NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
                               +S++  Y +CG +  A K+F      D+++ T+MI+ Y+Q
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG-FMSDTF 435
            G   EAL+L+ EM+   I PD     ++L+ACA L A++ GK+++   I+ G F  +T 
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDR---GIVSWSAMIGGLAQHGRGKEALQMFGQML 492
              ++++MYAKCGSID A   F  +      G V +++MI GLAQHG G+ A+ +F +++
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFV-FNSMIAGLAQHGLGETAITVFRELI 443

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             G+ P+ +T V VLCAC H+GL+ E K  FESM   +GI+P  EHY CM+D+LGR G  
Sbjct: 444 STGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCL 503

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           +EA +LV  MPF+AN+ +W ALL A R + NV++G+ A + L  +E +  + +VLLSNI 
Sbjct: 504 EEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNIL 563

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A A  W+   +VR+ M+D+ ++K PG S+IE+   ++ F   D+SH + KEI   L +++
Sbjct: 564 ADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMA 623

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             L  AGYVP     + D++E EKE ++ +HSEKLA+AFGL+   P  TIR+ KNLRIC 
Sbjct: 624 MRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICA 683

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH +F+ +S+I  REI VRD  RFHHFRNGSCSC  +W
Sbjct: 684 DCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 257/540 (47%), Gaps = 53/540 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN---FIDSRRLFDAIP 57
           +L++C S K    GLQ+H   +  G     F  + L+  ++  G+      SR LF  I 
Sbjct: 15  LLESCKSFKQ---GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGR 116
             ++  WN++   Y   D   EA+  +  M+  GI  PN F+   ++N+CA       G 
Sbjct: 72  CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++H + IK G++SD+F  NAL+ +Y+  GNL  A  +F +    D+VS+N +I G     
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK--MEIKSDPIV 234
             + AL LF +M++S I P+ FT+ +    C+ +    +G+Q+H  + K    I S+ ++
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251

Query: 235 GVGLVDMYAK--------------------------------CGSMDEARMIFHLMPEKN 262
              +VDMYAK                                CG ++ AR +F+ M E++
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD 311

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           +I+W  +ISG+ Q G   EA  LF  M   G+  D+ TL  VL + A   A  + K+++ 
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371

Query: 323 LSVKTA-FESDDYIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGL 379
             ++   F  +  +  +++D Y KCG ++ A++IF+    +        SMI   AQ GL
Sbjct: 372 QYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGL 431

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGN 438
           GE A+ ++ E+    + PD      +L AC +    E+GK++   +   +G         
Sbjct: 432 GETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYG 491

Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR-------GKEALQMFGQ 490
            +V++  + G +++A     ++P +   V W A++     HG        G++ L+M  Q
Sbjct: 492 CMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 551



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 144/282 (51%), Gaps = 9/282 (3%)

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH---VEDAVKIFKESS 360
           +L+S  SF+  G+  Q+HA ++        + ++ LI  +   G    ++ +  +F +  
Sbjct: 15  LLESCKSFKQ-GL--QIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGK 419
             +L    +MI  Y++     EA+ LY+ M  + I  P++F    LLN+CA LS+ E G 
Sbjct: 72  CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH HIIK GF SD F  N+L+++Y+  G+++ A   F E   R +VS++ MI G A+  
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
           + + AL +FG+M   G+LP+  T V++   C+        K  H +  +    I      
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
            + ++D+  + G    A  +  TM    +A+ W +++ G AR
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYAR 293


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/758 (36%), Positives = 410/758 (54%), Gaps = 32/758 (4%)

Query: 29  DEFVANSLVVMYAKCGNFIDSR-RLFDAIPERSVVSWNSLFSCY--VHCDFLEEAVCFFK 85
           D   A+SL++ YA   +      RL+ A P       NSL      +  D L  +     
Sbjct: 56  DHAPASSLLLRYASLRSPPAHLLRLYRAFPRPDRFLRNSLLRSLPTLRADLLFPS----- 110

Query: 86  EMVLSGIRPNEFSL----SSMINACAGSGDSLLG------RKIHGYSIKLGYDSDMFSAN 135
                   P+ FS     +S+ ++C+  G S         R +H  ++  G+ +D F A+
Sbjct: 111 --------PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVAS 162

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EIN 194
           AL  +Y  +    DA  VF  +  PD V WN ++AG    E    AL+ F +M  +  + 
Sbjct: 163 ALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSE----ALEAFVRMAGAGSVR 218

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+  T  S L A A +    +GR +H    K  +     V  GL+ +YAKCG M+ AR +
Sbjct: 219 PDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHL 278

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  M   +L+ +N +ISG+  NG    +  LF  +   G+    +TL  ++   + F   
Sbjct: 279 FDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHE 338

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            +   +HA  VK   +++  +  +L   Y +   ++ A + F       + +  +MI+ Y
Sbjct: 339 PLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGY 398

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           AQ GL E A+ L+ +MQ   + P+    SS L+ACA L A   GK VH  I       + 
Sbjct: 399 AQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNV 458

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           +   +L++MY KCGSI +A   F  + ++ +VSW+ MI G   HG+G EAL+++  M++ 
Sbjct: 459 YVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDA 518

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            + P   T +SVL AC+H GLV E    F SM   +GI P  EH  CM+D+LGRAG+ +E
Sbjct: 519 HLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKE 578

Query: 555 AMELVDTMPFQA-NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           A EL+   P  A    +WGALLGA  ++K+ ++ + A++ LF +EPE +  +VLLSN+Y 
Sbjct: 579 AFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYT 638

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           S   +   A VR+  K  KL K PG + IE+ D+ + F  GDR+H +S  IY  L++++ 
Sbjct: 639 SKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTA 698

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            + +AGY P  E  L+DVEE EKE ++  HSEKLA+AFGL+ T PG  IR+ KNLR+C+D
Sbjct: 699 KMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLD 758

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CH + + ISK+  R I+VRD +RFHHFR+G CSCG YW
Sbjct: 759 CHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 239/472 (50%), Gaps = 8/472 (1%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H + V +GF +D FVA++L  +Y       D+R++FDA+P    V WN+L +     + 
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEA 204

Query: 77  LEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           LE     F  M  +G +RP+  +L+S++ A A   ++ +GR +H +  K G         
Sbjct: 205 LEA----FVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            L+ +YAK G++E A  +F  +E PD+V++NA+I+G  ++     +++LF+++    + P
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T  + +   +    + L   LH  ++K  + ++  V   L  +Y +   MD AR  F
Sbjct: 321 SSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF 380

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             MPEK + +WN +ISG+ QNG    A +LF  M    V  +  T+S+ L + A   A+ 
Sbjct: 381 DAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALS 440

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + K VH +      E + Y++ +LID Y KCG + +A  IF      ++V+   MI+ Y 
Sbjct: 441 LGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYG 500

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDT 434
             G G EALKLY +M D  ++P S    S+L AC++    ++G  V   +   +G     
Sbjct: 501 LHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGI 560

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS--WSAMIGGLAQHGRGKEA 484
                +V++  + G + +A    SE P   +    W A++G    H  G  A
Sbjct: 561 EHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 186/364 (51%), Gaps = 11/364 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A     +  +G  VH      G    E V   L+ +YAKCG+   +R LFD +    
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPD 286

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V++N+L S Y     +  +V  FKE+V  G+RP+  +L ++I   +  G   L   +H 
Sbjct: 287 LVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHA 346

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K G D++   + AL  +Y +  +++ A   F  +    + SWNA+I+G   +   + 
Sbjct: 347 HVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEM 406

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQQM++  + PN  T +SAL ACA +    LG+ +H  +   +++ +  V   L+D
Sbjct: 407 AVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALID 466

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS+ EAR IF  M  KN+++WN++ISG+  +G   EA  L+  M    +     T
Sbjct: 467 MYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHL---HPT 523

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV------NSLIDAYGKCGHVEDAVK 354
            ST L  + +    G+ K+    +V  +  SD  I         ++D  G+ G +++A +
Sbjct: 524 SSTFLSVLYACSHGGLVKE--GTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFE 581

Query: 355 IFKE 358
           +  E
Sbjct: 582 LISE 585


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/691 (35%), Positives = 391/691 (56%), Gaps = 46/691 (6%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK-----D 156
           +++  A  GD   GR++     K     +++  N +V  YAK+G+ ++++ +FK      
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG 57

Query: 157 IEHP---------------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYT 201
           IE                 D++SWN++I+G V +   +  L +++QM    I+ ++ T  
Sbjct: 58  IEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATII 117

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           S L  CA      LG+ +H   IK   +        L+DMY+KCG +D A  +F  M E+
Sbjct: 118 SVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 177

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           N+++W  +I+G+ ++G    A  L   M +EGV  D   ++++L + A   ++   K VH
Sbjct: 178 NVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH 237

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
                    S+ ++ N+L+D Y KCG +E A  +F      D+++  +M+          
Sbjct: 238 DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG--------- 288

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
                       E+ PDS   + +L ACA+LSA E+GK++H +I++ G+ SD    N+LV
Sbjct: 289 ------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 336

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           ++Y KCG +  A   F  IP + +VSW+ MI G   HG G EA+  F +M + G+ P+ +
Sbjct: 337 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 396

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           + +S+L AC+H+GL+ +    F  M+  F I+P  EHYACM+D+L R G   +A + ++T
Sbjct: 397 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET 456

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           +P   +A++WGALL   RIY ++E+ +  AE +F +EPE +  +VLL+NIYA A  W+ V
Sbjct: 457 LPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 516

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR-SHARSKEIYAKLDEVSDLLNKAGY 680
            ++R  +    L+K PG SWIE+K +V  F  G+  SH  SK+I + L ++   + + GY
Sbjct: 517 KRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGY 576

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
            P  +  L + +E +KE  L  HSEKLA+AFGL+  PP  TIRV KNLR+C DCH   +F
Sbjct: 577 FPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKF 636

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +SK   REI++RD NRFHHF++G CSC G+W
Sbjct: 637 MSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 279/557 (50%), Gaps = 59/557 (10%)

Query: 26  FDSDE----FVANSLVVMYAKCGNF--------------IDSRR------LFDAIPERSV 61
           FD+ E    ++ N +V  YAK G+F              I+ +R      LFD + +R V
Sbjct: 19  FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDV 78

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +SWNS+ S YV     E  +  +K+M+  GI  +  ++ S++  CA SG   LG+ +H  
Sbjct: 79  ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSL 138

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           +IK  ++  +  +N L+DMY+K G+L+ A+ VF+ +   ++VSW ++IAG      +D A
Sbjct: 139 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 198

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + L QQM+   +  ++   TS L ACA     + G+ +H  +    + S+  V   L+DM
Sbjct: 199 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDM 258

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKCGSM+ A  +F  M  K++I+WN ++ G L+                     D  T+
Sbjct: 259 YAKCGSMEGANSVFSTMVVKDIISWNTMV-GELKP--------------------DSRTM 297

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           + +L + AS  A+   K++H   ++  + SD ++ N+L+D Y KCG +  A  +F    +
Sbjct: 298 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 357

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DLV+ T MI  Y   G G EA+  + EM+D  I PD     S+L AC++    EQG + 
Sbjct: 358 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 417

Query: 422 HVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLA 476
             +I+K  F  +    +   +V++ ++ G++  A +    +   PD  I  W A++ G  
Sbjct: 418 -FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI--WGALLCGCR 474

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            +   + A ++  ++ E   L    T   VL A  +A   AE     + M +K G + ++
Sbjct: 475 IYHDIELAEKVAERVFE---LEPENTGYYVLLANIYAE--AEKWEEVKRMREKIGKKGLR 529

Query: 537 EHYAC-MIDILGRAGKF 552
           ++  C  I+I GR   F
Sbjct: 530 KNPGCSWIEIKGRVNLF 546



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 72/515 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C     L LG  VH + + + F+     +N+L+ MY+KCG+   + R+F+ + ER+
Sbjct: 119 VLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 178

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ + Y    + + A+   ++M   G++ +  +++S+++ACA SG    G+ +H 
Sbjct: 179 VVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 238

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y       S++F  NAL+DMYAK G++E A +VF  +   DI+SWN ++           
Sbjct: 239 YIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------- 288

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
                      E+ P+  T    L ACA +   E G+++H  +++    SD  V   LVD
Sbjct: 289 -----------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 337

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KCG +  AR++F ++P K+L++W ++I+G+  +G   EA + F  M   G+  D+ +
Sbjct: 338 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 397

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L +         C     L     F    YI+ +  +   K  H          + 
Sbjct: 398 FISILYA---------CSHSGLLEQGWRFF---YIMKNDFNIEPKLEHY---------AC 436

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VDL++ T  ++            K Y  ++   I PD+ +  +LL  C      E  ++
Sbjct: 437 MVDLLSRTGNLS------------KAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEK 484

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGL 475
           V   + +     +T     L N+YA+    ++  R   +I  +G+      SW  + G +
Sbjct: 485 VAERVFELE-PENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRV 543

Query: 476 A----------QHGRGKEAL--QMFGQMLEDGVLP 498
                       H +  E+L  +M  +M E+G  P
Sbjct: 544 NLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFP 578


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/563 (41%), Positives = 353/563 (62%), Gaps = 8/563 (1%)

Query: 216 GRQLHCSLIKMEI-KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           GRQLH   I+  +  SDP     L+ MY  C    +AR  F  +P  N +    + SG++
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 275 QNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           +N     + +LF  +   G     D+        + A     G+   +HAL VKT  + D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 333 DYIVNSLIDAYGKCGHVE--DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
             +VN+++DAY K G  +   A K+F ++   D+V+  SMI  YAQ G+  +AL LY +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVF-DTMEKDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 391 QD--REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            +    I  ++   S++L ACA+    + GK +H  +++ G   + + G S+V+MY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ++ A +AF +I ++ I+SWSAMI G   HG G+EAL +F +M   G  PN+IT +SVL 
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+HAGL+ + ++ + +M+K+FGI+P  EHY CM+D+LGRAG   EA  L+  M  + +A
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           ++WGALL A RI+KNVE+ + +A+ LF ++      +VLLSNIYA AGMW +V ++R  +
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K   ++K PG S +E+K + + F VGD+SH + KEIY+ L ++ + + +AGYVP   + L
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVL 586

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           HD++E EK   L+ HSEKLA+AF L+ + PG+ I V KNLR+C DCHT+ + I+KI  RE
Sbjct: 587 HDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQRE 646

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD+ RFHHF++GSCSCG YW
Sbjct: 647 IIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 68/514 (13%)

Query: 14  GLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G Q+H + + +G F SD F A++L+ MY  C   ID+R+ FD IP  + V   ++ S YV
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 73  HCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
             + +  ++  F++++ SG     +E +     +A A   D  +   +H   +K G D D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 131 MFSANALVDMYAKVG--NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
               N ++D YAK G  +L  A  VF  +E  D+VSWN++IA    +  +  AL L+++M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTMEK-DVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 189 --KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
              S  I  N  T ++ L ACA     + G+ +H  +++M ++ +  VG  +VDMY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            ++ AR  F  + EKN+++W+ +I+G+  +G   EA  +F  M R G   +  T  +VL 
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                          A S     +   Y  N++   +G    +E  V+ +          
Sbjct: 407 ---------------ACSHAGLLDKGRYWYNAMKKRFG----IEPGVEHY---------G 438

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C  M+    + G  +EA  L  EM+   + PD+ +  +LL+AC         K V +  I
Sbjct: 439 C--MVDLLGRAGCLDEAYGLIKEMK---VKPDAAIWGALLSAC------RIHKNVELAEI 487

Query: 427 KFGFMSDTFAGNS-----LVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIG--- 473
               + +  A N      L N+YA+ G   D +R    +  RGI      S   + G   
Sbjct: 488 SAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTH 547

Query: 474 ----GLAQHGRGKEALQMFGQMLED----GVLPN 499
               G   H + KE     G++LE     G +PN
Sbjct: 548 LFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPN 581



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 100/185 (54%), Gaps = 6/185 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     +  G  +H  VV  G + + +V  S+V MY+KCG    +R+ F  I E++
Sbjct: 303 ILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKN 362

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ + Y      +EA+  F EM  SG  PN  +  S++ AC+ +G  LL +  + 
Sbjct: 363 ILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAG--LLDKGRYW 420

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           Y+    + G +  +     +VD+  + G L++A  + K+++  PD   W A+++ C +H+
Sbjct: 421 YNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHK 480

Query: 177 HNDWA 181
           + + A
Sbjct: 481 NVELA 485


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/687 (37%), Positives = 391/687 (56%), Gaps = 3/687 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ACT    L   LQ+HG+VV  G+  D +V  SL+  Y K     D+R LFD +  ++
Sbjct: 147 VVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKT 206

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W ++ + Y      + ++  F +M    + P+++ LSS+++AC        G++IH 
Sbjct: 207 SFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHC 266

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G   D+   N  +D Y K   ++    +F  +   ++VSW  VIAGC+ +  +  
Sbjct: 267 YVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRD 326

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M     NP+ F  TS L +C  +   E GRQ+H   IK+ I +D  V  GL+D
Sbjct: 327 ALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLID 386

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKC S+ +AR +F+LM   +L+++N +I G+ +     EA  LF  M           
Sbjct: 387 MYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLI 446

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L   AS   + +  Q+H L +K     D++  ++LID Y KC  V DA  +F+E  
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ 506

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V  T+M + Y Q    EE+LKLY  +Q   + P+ F  ++++ A +N+++   G+Q
Sbjct: 507 DKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQ 566

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H  +IK GF  D F  N+LV+MYAK GSI++A +AF     +    W++MI   AQHG 
Sbjct: 567 FHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGE 626

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            ++ALQ+F  M+ +G+ PN++T V VL AC+H GL+     HF+SM  +FGI+P  EHY 
Sbjct: 627 AEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPGIEHYV 685

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+ +LGRAGK  EA E ++ MP +  A VW +LL A R+  NVE+G +AAEM  +  P 
Sbjct: 686 CMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPA 745

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S ++VLLSNI+AS GMW NV ++R  M  + + KEPG SWIEV ++++ F   D +H  
Sbjct: 746 DSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRD 805

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETD 687
           S  I   LD +  LL   G+  M  TD
Sbjct: 806 SAPISLVLDNL--LLQIKGFGYMANTD 830



 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 178/543 (32%), Positives = 293/543 (53%), Gaps = 5/543 (0%)

Query: 16  QVHGIVVFTGFDS-DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           ++H  +V  GF   D F+ N+L+  Y+K      + +LFD +  +++V+W+S+ S Y H 
Sbjct: 59  KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118

Query: 75  DFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
               EA+  F + + S   +PNE+ L+S++ AC   G      +IHG  +K GY  D++ 
Sbjct: 119 SHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYV 178

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             +L+D Y K   ++DA  +F  ++     +W  +IAG      +  +LKLF QMK   +
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHV 238

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+ +  +S L AC  ++  E G+Q+HC +++  I  D  +  G +D Y KC  +   R 
Sbjct: 239 CPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M +KN+++W  VI+G +QN    +A  LF  M R G   D    ++VL S  S  A
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   +QVHA ++K   ++DD++ N LID Y KC  + DA K+F   +A+DLV+  +MI  
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y++     EAL L+ EM+    +P   +  SLL   A+L   E   Q+H  IIK+G   D
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLD 478

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            FAG++L+++Y+KC  + DA   F EI D+ IV W+AM  G  Q    +E+L+++  +  
Sbjct: 479 EFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQM 538

Query: 494 DGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             + PN  T  +V+ A  N A L    + H + ++  F   P   +   ++D+  ++G  
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSI 596

Query: 553 QEA 555
           +EA
Sbjct: 597 EEA 599


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/665 (35%), Positives = 385/665 (57%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           GF+ DEFV +SL+ +YA+ G   D+RRLFD +P +  V WN + + +V C     AV  F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           ++M     +PN  + +S+++ CA    S  G ++HG  I  G+  D   ANALV MY+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G L DA+ +F  +   ++V+WN +IAG V +   D A  LF +M S+ ++P+  T+ S L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            +       + G+++H  +++  I  D  +   L+D+Y KC  +  A  IF      +++
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
               +ISG++ NG + +A  +F W+  E +  +  TL++VL + A    + + K++HA  
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K   +   ++ ++++D Y KCG ++ A +IF+     D V   ++IT  +Q G  +EA+
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L+ +M    ++ D    S+ L+ACANL A   GK +H  +IK  F S+ FA ++L++MY
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMY 421

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
            KCG++  A   F  + ++  VSW+++I     HG  + +L +F +MLEDG+ P+H+T +
Sbjct: 422 GKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFL 481

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           ++L AC HAG V +   +F  M +++GI    EHYAC++D+ GRAG+  EA E +  MPF
Sbjct: 482 TILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPF 541

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
             +  VWG LLGA R++ NVE+ + A+  L  ++PE S  +VLLSN++A AG W +V K+
Sbjct: 542 SPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKI 601

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           R  MK   ++K PG SWIEV    + F   D SH  S +IY+ L+ +   L K GY P  
Sbjct: 602 RSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKP 661

Query: 685 ETDLH 689
              +H
Sbjct: 662 YLPMH 666



 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 163/483 (33%), Positives = 273/483 (56%), Gaps = 6/483 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S+     G Q+HG+V+  GF  D  VAN+LV MY+K G   D+ +LF+ +P+ +
Sbjct: 79  VLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTN 138

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN + + +V   F++EA   F EM+ +G+ P+  + +S + +   S     G++IHG
Sbjct: 139 VVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHG 198

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G   D+F  +AL+D+Y K  ++  A  +FK   + DIV   A+I+G VL+  N+ 
Sbjct: 199 YILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNND 258

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++F+ +   +++PN  T  S L ACAG+    LG++LH +++K  +     VG  ++D
Sbjct: 259 ALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMD 318

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +D A  IF  MPEK+ + WN +I+   QNG   EA  LF  M REG+ +D  +
Sbjct: 319 MYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVS 378

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +S  L + A+  A+   K +H+  +K AF+S+ +  ++LID YGKCG++  A  +F    
Sbjct: 379 ISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMR 438

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             + V+  S+I AY   G  E +L L+ +M +  I PD     ++L+AC +    ++G Q
Sbjct: 439 EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ 498

Query: 421 VHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLA 476
               +  ++G  +       +V+++ + G +++A      +   PD G+  W  ++G   
Sbjct: 499 YFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGV--WGTLLGACR 556

Query: 477 QHG 479
            HG
Sbjct: 557 VHG 559



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/509 (31%), Positives = 281/509 (55%), Gaps = 12/509 (2%)

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           +G++ D F  ++L+ +YA+ G +EDA  +F  + + D V WN ++ G V     + A+K+
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F+ M++ +  PN  T+ S L  CA   L E G QLH  +I      DP+V   LV MY+K
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G + +A  +F+ MP+ N++ WN +I+G +QNG   EA+ LF  M   GV  D  T ++ 
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           L SV    ++   K++H   ++     D ++ ++LID Y KC  V  A KIFK+S+ VD+
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V CT++I+ Y   GL  +AL+++  + + +++P++   +S+L ACA L+    GK++H +
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           I+K G       G+++++MYAKCG +D A + F  +P++  V W+A+I   +Q+G+ +EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACM 542
           + +F QM  +G+  + +++ + L AC +   +   K  H F  ++  F  +   E  + +
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSF-MIKGAFDSEVFAE--SAL 417

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF--AIEPE 600
           ID+ G+ G    A  + D M  + N   W +++ A   + ++EV       +    I+P+
Sbjct: 418 IDMYGKCGNLSVARCVFDMMR-EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPD 476

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
               HV    I ++ G    V K  ++ +
Sbjct: 477 ----HVTFLTILSACGHAGQVDKGIQYFR 501


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/691 (35%), Positives = 400/691 (57%), Gaps = 9/691 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS-------DEFVANSLVVMYAKCGNFIDSRRLF 53
           ++ AC+  + L  G +VH  +V +   S       +  + N L+ MY +C     +R++F
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           D +P R+ VSW S+ + +V      +A+  F  M+ SG   ++F+L S + AC   GD  
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            GR++H +++K    SD+   NALV MY+K G ++D   +F+ I+  D++SW ++IAG  
Sbjct: 170 TGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 229

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                  AL++F++M      +PN F + SA +AC  +   E G Q+H   IK  +  D 
Sbjct: 230 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 289

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  L DMYA+C ++D AR+ F+ +   +L++WN +++ +   G   EA  LF  M   
Sbjct: 290 YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 349

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  T+  +L +     A+   + +H+  VK   + D  + NSL+  Y +C  +  A
Sbjct: 350 GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSA 409

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           + +F E    D+V   S++TA AQ    EE LKL+  +   E + D    +++L+A A L
Sbjct: 410 MDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 469

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAM 471
             +E  KQVH +  K G + D    N+L++ YAKCGS+DDA R F  +  +R + SWS++
Sbjct: 470 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 529

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G AQ G  KEA  +F +M   G+ PNH+T + VL AC+  G V E  +++  ME ++G
Sbjct: 530 IVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 589

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P +EH +C++D+L RAGK  EA   +D MPF+ +  +W  LL A++++ ++E+G+ AA
Sbjct: 590 IVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAA 649

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           E +  I+P  S+ +VLL NIYA++G W+  A++++ M+ + +KK PG SW+++K ++  F
Sbjct: 650 EGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVF 709

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            V DRSH  S+EIYA L+ +   + KAGYVP
Sbjct: 710 IVEDRSHPESEEIYAMLELIGMEMIKAGYVP 740



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 223/442 (50%), Gaps = 21/442 (4%)

Query: 200 YTSALKACAGMELKELGRQLHCSLI-------KMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           Y + + AC+ +     GR++H  L+         ++  + ++G  L+ MY +C + D AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP +N ++W  VI+ H+QNG   +A  LF  M R G   DQ  L + +++     
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +G  +QVHA ++K+   SD  + N+L+  Y K G V+D   +F+     DL++  S+I 
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 373 AYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            +AQ G   EAL+++ EM  +   +P+ F   S   AC  + ++E G+Q+H   IK+   
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D + G SL +MYA+C ++D A  AF  I    +VSW++++   +  G   EAL +F +M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHH---FESMEKKFGIQPMQEHYACMIDILGR 548
            + G+ P+ IT+  +LCAC    +  +A +H     S   K G+         ++ +  R
Sbjct: 347 RDSGLRPDGITVRGLLCAC----VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYAR 402

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
                 AM++   +  Q +   W ++L A   + + E       +L   EP  S   + L
Sbjct: 403 CSDLSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SLDRISL 459

Query: 609 SNIYASA---GMWDNVAKVRRF 627
           +N+ +++   G ++ V +V  +
Sbjct: 460 NNVLSASAELGYFEMVKQVHAY 481


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/658 (38%), Positives = 385/658 (58%), Gaps = 33/658 (5%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L  A +VF+ I+ P+ + WN +I G  L      +L L+  M S  + PN +T+   LK+
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY------------------------ 242
           CA  +    G+Q+H  ++K+    D  V   L+ MY                        
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133

Query: 243 -------AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                  A  G +  A+ +F  +P K++++WN +ISG+ + G   EA  LF  M +  V 
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D++T  TVL + A   +I + +QVH+      F+S+  IVN+LID Y KCG VE A  +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F+  S  D+++  ++I  Y    L +EAL L+ EM      P+     S+L ACA+L A 
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313

Query: 416 EQGKQVHVHIIKF--GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           + G+ +HV+I K   G  + +    SL++MYAKCG I+ A + F+ +  + + SW+AMI 
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G A HGR   +  +F +M + G+ P+ IT V +L AC+H+G++   +H F SM + + + 
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY CMID+LG +G F+EA E+++TM  + +  +W +LL A +++ NVE+ +  A+ 
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  IEPE  S+++LLSNIYASAG W++VA++R  +    +KK PG S IEV   V+ F V
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVV 553

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD+ H +++EIY  L+E+  LL +AG+VP     L ++EE  KE  L HHSEKLA+AFGL
Sbjct: 554 GDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 613

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I+T PG  + + KNLR+C +CH + + +SKI  REI+ RD  RFHHFR+G CSC  YW
Sbjct: 614 ISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 227/490 (46%), Gaps = 71/490 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMY-------------------- 40
           +LK+C   K    G Q+HG V+  GFD D +V  SL+ MY                    
Sbjct: 70  LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129

Query: 41  -----------AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                      A  G+   +++LFD IP + VVSWN++ S Y      +EA+  F+EM+ 
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             +RP+E +  ++++ACA SG   LGR++H +    G+DS++   NAL+D+Y+K G +E 
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F+ + + D++SWN +I G         AL LFQ+M  S   PN  T  S L ACA 
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309

Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           +   ++GR +H  + K    + +   +   L+DMYAKCG ++ A  +F+ M  K+L +WN
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 369

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G   +G    +  LF  M + G+  D  T   +L + +    + + + +       
Sbjct: 370 AMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI------- 422

Query: 328 AFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
            F S   DY +   ++ YG                         MI      GL +EA +
Sbjct: 423 -FRSMTQDYKMTPKLEHYG------------------------CMIDLLGHSGLFKEAEE 457

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           +   M   E+ PD  +  SLL AC      E  +    ++IK     +  +   L N+YA
Sbjct: 458 MINTM---EMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIE-PENPSSYILLSNIYA 513

Query: 446 KCGSIDDADR 455
             G  +D  R
Sbjct: 514 SAGRWEDVAR 523



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 236/541 (43%), Gaps = 70/541 (12%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F+ I E + + WN++   +        ++  +  MV  G+ PN ++   ++ +CA S  
Sbjct: 20  VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------ 159
              G++IHG  +KLG+D D++   +L+ MY +   LEDA  VF    H            
Sbjct: 80  FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139

Query: 160 -------------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                               D+VSWNA+I+G         AL+LF++M    + P+  TY
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + L ACA     ELGRQ+H  +      S+  +   L+D+Y+KCG ++ A  +F  +  
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++I+WN +I G+       EA  LF  M R G   +  T+ +VL + A   AI + + +
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWI 319

Query: 321 HALSVK--TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           H    K      +   +  SLID Y KCG +E A ++F       L +  +MI  +A  G
Sbjct: 320 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 379

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             + +  L+  M+   I PD      LL+AC++    + G+ +      F  M+  +   
Sbjct: 380 RADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI------FRSMTQDYKMT 433

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
             +  Y                          MI  L   G  KEA +M   M  +   P
Sbjct: 434 PKLEHYG------------------------CMIDLLGHSGLFKEAEEMINTMEME---P 466

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ-EHYACMIDILGRAGKFQEAME 557
           + +   S+L AC   G V  A+   +++ K   I+P     Y  + +I   AG++++   
Sbjct: 467 DGVIWCSLLKACKMHGNVELAESFAQNLIK---IEPENPSSYILLSNIYASAGRWEDVAR 523

Query: 558 L 558
           +
Sbjct: 524 I 524


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/574 (40%), Positives = 353/574 (61%), Gaps = 2/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   L  C        G+++H  +IK        +   L+ +Y KC  +  AR +F  M 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+N+++W  +ISG+ Q G   EA  LF  M R     ++ T +TVL S   F    + +Q
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H+   K  +E+  ++ +SL+D Y K G + +A  +F+     D+V+CT++I+ YAQ GL
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL+L+  +Q   ++ +    +SLL A + L+A + GKQVH H+++          NS
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLP 498
           L++MY+KCG+++ A + F+ +P R ++SW+AM+ G ++HG+G E +++F  M E+  V P
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKP 312

Query: 499 NHITLVSVLCACNHAGLVAEAKHHF-ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           + +T ++VL  C+H GL  +    F E M     I+   EHY C+ID+LGRAG+ +EA E
Sbjct: 313 DSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFE 372

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
           L+  MPF+  A++WG+LLGA R++ N  +G+     L  IEPE +  +V+LSN+YASAG 
Sbjct: 373 LIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGR 432

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W++V  VR  M +  + KEPG SWIE+   ++TF   DRSH R +E++ K+ E+     +
Sbjct: 433 WEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKE 492

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           +GYVP     L+DV+E +KE++L  HSEKLA+AFGLI+T  G  +RV KNLRICVDCH  
Sbjct: 493 SGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNF 552

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +F+SK+  R++ +RD NRFHH   G CSCG YW
Sbjct: 553 AKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 252/521 (48%), Gaps = 58/521 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +K+ +  G +VH  ++ T +    +++  L+++Y KC     +R +FD + ER+
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y    F  EA+  F +M+ S   PNEF+ ++++++C G     LGR+IH 
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  K  Y++ +F  ++L+DMYAK G + +A  VF+ +   D+VS  A+I+G      ++ 
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF +++   ++ N  TY S L A +G+   + G+Q+H  +++ E+    ++   L+D
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLID 255

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCG+++ AR IF+ MP + +I+WN ++ G+ ++G  +E   LF  M  E  V  D  
Sbjct: 256 MYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSV 315

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           T   VL   S    +  G+      ++     E+       +ID  G+ G VE+A ++ K
Sbjct: 316 TFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIK 375

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                                      K+  E       P + +  SLL AC   S    
Sbjct: 376 ---------------------------KMPFE-------PTAAIWGSLLGACRVHSNTNI 401

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDA--------DRAFSEIPDRGIVS 467
           G+ V   +++   +    AGN ++  N+YA  G  +D         ++A  + P R  + 
Sbjct: 402 GEFVGCRLLE---IEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIE 458

Query: 468 WSAMIGGL----AQHGRGKEALQMFGQML----EDGVLPNH 500
               I         H R +E      ++L    E G +P+ 
Sbjct: 459 LDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQ 499


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/710 (34%), Positives = 401/710 (56%), Gaps = 3/710 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ CT    L  G Q H  ++  G   +  +   L+ MY  CG F+D++ +F  +    
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
              WN +   +      + A+ F+ +M+  G  P++++   +I AC G     LGR +H 
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
               +G++ D+F  ++L+  Y++ G + DA  +F  +   D V WN ++ G V +   D 
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           A  +F +M+ +E NPN  T+   L  CA   +   G QLH  ++   ++ D  V     L
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFAL 291

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +D+Y KC  ++ AR IF      +++    +ISG++ NG +  A  +F W+ +E +  + 
Sbjct: 292 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TL++VL + A   A+ + K++H   +K       Y+ ++++D Y KCG ++ A + F  
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S  D V   SMIT+ +Q G  EEA+ L+ +M       D    S+ L+ACANL A   G
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H  +++  F SD FA ++L++MY+KCG++D A R F  + ++  VSW+++I     H
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GR K++L +F  ML DG+ P+H+T ++++ AC HAG V E  H+F  M ++ GI    EH
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 591

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YACM+D+ GRAG+  EA  ++++MPF  +A VWG LLGA R++ NVE+ + A+  LF ++
Sbjct: 592 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLD 651

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+ S  +VLLSN++A+AG W++V K+R  MK+  ++K PG SWI+V +  + F   DRSH
Sbjct: 652 PQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSH 711

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES-EKEQLLYHHSEKL 707
            +S +IY  L  +   L K GYVP +   +H         ++ Y+HS K+
Sbjct: 712 PQSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQTMGLHNGRISYYHSSKI 761



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 241/482 (50%), Gaps = 6/482 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L S++  C        GR+ H   +  G   +      L+ MY   G   DA  +F  + 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
                 WN +I G  +    D+AL  + +M      P+ +T+   +KAC G+    LGR 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +  M  + D  VG  L+  Y++ G + +AR +F  MP K+ + WN++++G+++NG 
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
              A  +F  M R     +  T + VL   AS   I    Q+H L V +  E D  + N+
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 339 --LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
             LID Y KC  VE A KIF + + VD+V CT+MI+ Y   G+   AL+++  +    + 
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            +S   +S+L ACA L+A   GK++H HI+K G     + G+++++MYAKCG +D A + 
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGL 515
           F  I D+  V W++MI   +Q+G+ +EA+ +F QM   G   + +++ + L AC N   L
Sbjct: 409 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 468

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               + H   M   F      E  + +ID+  + G    A  + DTM  + N   W +++
Sbjct: 469 HYGKEIHAFMMRGAFRSDLFAE--SALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 525

Query: 576 GA 577
            A
Sbjct: 526 AA 527


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/770 (35%), Positives = 423/770 (54%), Gaps = 29/770 (3%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAK--CGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           VH  +     ++  F+ N L+  Y +   G  + + RL D +P R+ VS+N +   Y   
Sbjct: 21  VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRA 80

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
                ++  F          + F+ ++ + AC+ + D   G+ +H   +  G  + +F +
Sbjct: 81  GLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLS 140

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           N++  MYA+ G + +A  VF   E  D VSWNA+++G V     +  L++F  M    + 
Sbjct: 141 NSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLG 200

Query: 195 PNMFTYTSALKACAGMELK---------ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            N F   S +K CA               +   +H  ++K  + +D  +   ++DMYAK 
Sbjct: 201 WNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKR 260

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHL-QNGGDM--EAASLFPWMYREGVGFDQTTLS 302
           G++  A  +F  +P+ N+I  N +I+G   +   D+  EA  L+  +   G+   + + S
Sbjct: 261 GALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFS 320

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           ++L++       G  KQ+H   +K +F+ D YI ++LID Y   G +ED  + F+     
Sbjct: 321 SILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQ 380

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           D+V  TS+I+   Q  L EEAL+L+ E     + PD F  SS++NACA+L+    G+Q+ 
Sbjct: 381 DVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQ 440

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
              +K GF   T  GNS ++M A+ G +D A R F E+  R +VSWSA+I   A HG  +
Sbjct: 441 CLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCAR 500

Query: 483 EALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           +AL +F +ML+  V P N IT +S+L AC+H GLV E   ++  M  ++G+ P  +H  C
Sbjct: 501 DALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTC 560

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++D+LGRAG+  +A   +    F  +A VW +LL + RI+ ++E GQ  A+ +  +EP  
Sbjct: 561 VVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTS 620

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S+++V+L N+Y  AG   + +K R  MK+  +KKEPG+SWIE+   V++F  GD+SH  S
Sbjct: 621 SASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPES 680

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           K IY K   V+++++K   +   E DL              HSEKLAVAFG+I  P  A 
Sbjct: 681 KAIYRK---VAEMVSKVAGISSREQDLAGC-----------HSEKLAVAFGMIHLPQSAP 726

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IRV KNLR+C DCH++ E ISK   REII+RD  RFH FR+GSCSCGGYW
Sbjct: 727 IRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFRDGSCSCGGYW 776



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 162/516 (31%), Positives = 274/516 (53%), Gaps = 36/516 (6%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C+   D+  G  VH +VV  G  +  F++NS+  MYA+CG   ++RR+FDA  ER  VSW
Sbjct: 112 CSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSW 171

Query: 65  NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS---------GDSLLG 115
           N+L S YV     EE +  F  M   G+  N F+L S+I  CA S         G   + 
Sbjct: 172 NALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIA 231

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
             +HG  +K G D+D+F A+A++DMYAK G L +AVA+FK +  P+++  NA+IAG    
Sbjct: 232 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCRE 291

Query: 176 EHNDW---ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           E  D    AL L+ +++S  + P+ F+++S L+AC        G+Q+H  ++K   + D 
Sbjct: 292 EAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +G  L+D+Y+  G M++    F  +P+++++ W  VISG +QN    EA  LF    R 
Sbjct: 352 YIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRC 411

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D   +S+V+ + AS       +Q+  L+VK+ F     + NS I    + G V+ A
Sbjct: 412 GLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAA 471

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACAN 411
            + F+E  + D+V+ +++I+++A  G   +AL ++ EM D ++  P+     S+L AC++
Sbjct: 472 TRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSH 531

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAF---SEIP 461
               ++G +       +G M+D +           +V++  + G + DA+ AF   S   
Sbjct: 532 GGLVDEGLRY------YGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAE-AFIRDSAFH 584

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           D  +V W +++     HG  +      GQ++ D ++
Sbjct: 585 DDAVV-WRSLLASCRIHGDMER-----GQLVADKIM 614



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 153/293 (52%), Gaps = 14/293 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC    +   G Q+HG V+   F  D ++ ++L+ +Y+  G   D  R F ++P++ 
Sbjct: 322 ILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQD 381

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV W S+ S  V  +  EEA+  F+E V  G+RP+ F++SS++NACA    +  G +I  
Sbjct: 382 VVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQC 441

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G++      N+ + M A+ G+++ A   F+++E  D+VSW+AVI+    H     
Sbjct: 442 LAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARD 501

Query: 181 ALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VG 237
           AL +F +M  +++  PN  T+ S L AC+   L + G + +  ++  E    P +     
Sbjct: 502 ALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYY-GIMNDEYGLSPTIKHCTC 560

Query: 238 LVDMYAKCGSMDEARMI-----FHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
           +VD+  + G + +A        FH     + + W  +++   +  GDME   L
Sbjct: 561 VVDLLGRAGRLADAEAFIRDSAFH----DDAVVWRSLLAS-CRIHGDMERGQL 608


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/631 (40%), Positives = 373/631 (59%), Gaps = 8/631 (1%)

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           Y +   L DA+ +F  +   D+VSWN++I GC+   +   A +LF +M       N+ ++
Sbjct: 53  YTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK----NVISW 108

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
           T+ +         EL ++L    + M +K D      +V  Y + G ++E   +F  MP 
Sbjct: 109 TTMVNGYLKFGRVELAQRL---FLDMHVK-DVAAWNAMVHGYFENGRVEEGVRLFEEMPV 164

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           +++I+W  +I G   NG   EA  +F  M R GV    +T + VL + A+     +  QV
Sbjct: 165 RDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQV 224

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           H   VK      ++I  SLI  Y  C  +E A KIF E+   ++V  T+++TAY      
Sbjct: 225 HGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKH 284

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           ++AL+++ +M      P+    S  L AC  L A ++GK++H   IK G  +D F GNSL
Sbjct: 285 QDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSL 344

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           V MY +CG+++ A   F  I ++ IVSW+++I G AQHG G  AL  F QM+  GV PN 
Sbjct: 345 VVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNE 404

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           IT   +L AC+ +G++ + +  FE + +        +HYACM+DILGR GK  EA ELV 
Sbjct: 405 ITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVR 464

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            MP +AN+ +W ALL A R++ N+EV + AA+ +  +EP  SS +VLLSNIYASAG W +
Sbjct: 465 YMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWAD 524

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V+++R  MK   L K+PG SW+ ++ K + F   DRSH  S+ IY KLD +   L + GY
Sbjct: 525 VSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGY 584

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           VP  +  LHDVE+ +KE++L  HSE+LA+AFGL++T  G+TI V KNLR+C DCH+  + 
Sbjct: 585 VPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKL 644

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +SKIV R+I+VRD  RFHHF+NG CSC  YW
Sbjct: 645 MSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 226/448 (50%), Gaps = 16/448 (3%)

Query: 36  LVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN 95
           ++  Y +     D+ +LFD +  R VVSWNS+    + C  L  A   F EM       N
Sbjct: 49  MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP----EKN 104

Query: 96  EFSLSSMINACAGSGDSLLGRKIH-GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
             S ++M+N     G   L +++     +K     D+ + NA+V  Y + G +E+ V +F
Sbjct: 105 VISWTTMVNGYLKFGRVELAQRLFLDMHVK-----DVAAWNAMVHGYFENGRVEEGVRLF 159

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
           +++   D++SW ++I G  L+  ++ AL +F++M  S + P   T+   L ACA      
Sbjct: 160 EEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFN 219

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           LG Q+H  ++K+       + V L+  YA C  ++ A  IF+    KN++ W  +++ ++
Sbjct: 220 LGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYV 279

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
            N    +A  +F  M + G   +Q+T S  LK+    +A+   K++H +++K   E+D +
Sbjct: 280 WNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVF 339

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + NSL+  Y +CG+V  AV +F+  +  D+V+  S+I   AQ G G  AL  + +M  R 
Sbjct: 340 VGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRG 399

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG---FMSDTFAGNSLVNMYAKCGSID 451
           ++P+    + LL+AC+      +G+    +I ++         +A   +V++  +CG +D
Sbjct: 400 VDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYA--CMVDILGRCGKLD 457

Query: 452 DADRAFSEIPDRG-IVSWSAMIGGLAQH 478
           +A+     +P +   + W A++     H
Sbjct: 458 EAEELVRYMPVKANSMIWLALLSACRVH 485



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 150/275 (54%), Gaps = 4/275 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +  +  LG+QVHG VV  G    EF++ SL+  YA C     + ++F+    ++
Sbjct: 208 VLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKN 267

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV W +L + YV  +  ++A+  F +M   G  PN+ + S  + AC G      G++IH 
Sbjct: 268 VVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHT 327

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IKLG ++D+F  N+LV MY + GN+  AVAVF++I   DIVSWN++I G   H    W
Sbjct: 328 MAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLW 387

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           AL  F QM    ++PN  T+T  L AC  +GM LK      + S  K  +   P     +
Sbjct: 388 ALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLR-PQHYACM 446

Query: 239 VDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISG 272
           VD+  +CG +DEA  +   MP K N + W  ++S 
Sbjct: 447 VDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA 481



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 220/433 (50%), Gaps = 21/433 (4%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N++V  Y + G   +  RLF+ +P R V+SW S+          EEA+  FK+M+ SG+ 
Sbjct: 140 NAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVE 199

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P   + + +++ACA + +  LG ++HG+ +KLG     F + +L+  YA    +E A  +
Sbjct: 200 PTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKI 259

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F +    ++V W A++   V +  +  AL++F  M      PN  T++  LKAC G+E  
Sbjct: 260 FNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEAL 319

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           + G+++H   IK+ +++D  VG  LV MY +CG+++ A  +F  + EK++++WN +I G 
Sbjct: 320 DKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGS 379

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI--GVCKQVHALSVKTAFES 331
            Q+G  + A   F  M R GV  ++ T + +L + +    +  G C   +    K+    
Sbjct: 380 AQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLR 439

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +    ++D  G+CG +++A ++ +    +++++  +A  S    ++   + E A K  
Sbjct: 440 PQHYA-CMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHI 498

Query: 388 LEMQDREINPDSFVCSS----LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L+++     P+   CSS    L N  A+   +    ++ V + + G +     G+S V +
Sbjct: 499 LDLE-----PN---CSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQ--PGSSWVVL 548

Query: 444 YAKCGSIDDADRA 456
             K      ADR+
Sbjct: 549 RGKKHEFLSADRS 561



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 152/316 (48%), Gaps = 26/316 (8%)

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQTT 300
           + K   +D+AR+IF  +P  NL  +  +I+G+ +N    +A  LF  M  R+ V ++   
Sbjct: 22  HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMI 81

Query: 301 ----------LSTVL------KSVASFQAI--GVCKQVHALSVKTAF----ESDDYIVNS 338
                     ++T L      K+V S+  +  G  K       +  F      D    N+
Sbjct: 82  KGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNA 141

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           ++  Y + G VE+ V++F+E    D+++ TSMI      G  EEAL ++ +M    + P 
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPT 201

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
               + +L+ACAN   +  G QVH H++K G     F   SL+  YA C  I+ A + F+
Sbjct: 202 WSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFN 261

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           E   + +V W+A++     + + ++AL++FG M + G LPN  T    L AC   GL A 
Sbjct: 262 ETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKAC--CGLEAL 319

Query: 519 AK-HHFESMEKKFGIQ 533
            K     +M  K G++
Sbjct: 320 DKGKEIHTMAIKLGLE 335


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 397/659 (60%), Gaps = 8/659 (1%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + I  + +K G+ +++ S + LVD   K G+++ A  VF  +    IV+WN++IA  + H
Sbjct: 85  KTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH--CSLIKMEIKSDPI 233
             +  A+++++ M ++ + P+ +T +S  KA + + L++  ++ H    ++ +E+ S+  
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV-SNVF 202

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  LVDMY K G   EA+++   + EK+++    +I G+ Q G D EA   F  M  E 
Sbjct: 203 VGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK 262

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  ++ T ++VL S  + + IG  K +H L VK+ FES      SL+  Y +C  V+D++
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++FK     + V+ TS+I+   Q G  E AL  + +M    I P+SF  SS L  C+NL+
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLA 382

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
            +E+G+Q+H  + K+GF  D +AG+ L+++Y KCG  D A   F  + +  ++S + MI 
Sbjct: 383 MFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             AQ+G G+EAL +F +M+  G+ PN +T++SVL ACN++ LV E    F+S  +K  I 
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF-RKDKIM 501

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
              +HYACM+D+LGRAG+ +EA E++ T     +  +W  LL A ++++ VE+ +     
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRK 560

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +  IEP    T +L+SN+YAS G W+ V +++  MKD KLKK P MSW+E+  + +TF  
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMA 620

Query: 654 GDR-SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
           GD  SH  S++I   L+E+       GYV        D+EE+ KE+ L+ HSEKLA+AF 
Sbjct: 621 GDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA 680

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +    G +IR+ KNLR+CVDCH+  + +S+++ REII RD  RFHHFR+GSCSCG YW
Sbjct: 681 -VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 260/496 (52%), Gaps = 6/496 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  ++ +     +   ++ +GF + E   + LV    KCG+   +R++FD + ER 
Sbjct: 71  LLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSERH 129

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNSL +  +     +EAV  ++ M+ + + P+E++LSS+  A +        ++ HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189

Query: 121 YSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            ++ LG + S++F  +ALVDMY K G   +A  V   +E  D+V   A+I G      + 
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+K FQ M   ++ PN +TY S L +C  ++    G+ +H  ++K   +S       L+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY +C  +D++  +F  +   N ++W  +ISG +QNG +  A   F  M R+ +  +  
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSF 369

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS+ L+  ++       +Q+H +  K  F+ D Y  + LID YGKCG  + A  +F   
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S VD+++  +MI +YAQ G G EAL L+  M +  + P+     S+L AC N    E+G 
Sbjct: 430 SEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGC 489

Query: 420 QVHVHIIKFGFM--SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           ++     K   M  +D +A   +V++  + G +++A+   +E+ +  +V W  ++     
Sbjct: 490 ELFDSFRKDKIMLTNDHYA--CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKV 547

Query: 478 HGRGKEALQMFGQMLE 493
           H + + A ++  ++LE
Sbjct: 548 HRKVEMAERITRKILE 563



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 204/379 (53%), Gaps = 6/379 (1%)

Query: 18  HGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           HG+ V  G + S+ FV ++LV MY K G   +++ + D + E+ VV   +L   Y     
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
             EAV  F+ M++  ++PNE++ +S++ +C    D   G+ IHG  +K G++S + S  +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ MY +   ++D++ VFK IE+P+ VSW ++I+G V +   + AL  F++M    I PN
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            FT +SAL+ C+ + + E GRQ+H  + K     D   G GL+D+Y KCG  D AR++F 
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG-FDQTTLSTVLKSVASFQAIG 315
            + E ++I+ N +I  + QNG   EA  LF  M   G+   D T LS +L    S     
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEE 487

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA-- 373
            C+   +        ++D+    ++D  G+ G +E+A  +  E    DLV   ++++A  
Sbjct: 488 GCELFDSFRKDKIMLTNDHYA-CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACK 546

Query: 374 -YAQFGLGEEALKLYLEMQ 391
            + +  + E   +  LE++
Sbjct: 547 VHRKVEMAERITRKILEIE 565


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/614 (40%), Positives = 361/614 (58%), Gaps = 24/614 (3%)

Query: 181 ALKLFQQMKSSEINPNMFTYTS---ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
           A+ LF QM++S + P      S   ALK+CAG+ L  L   LH   I+    +D      
Sbjct: 31  AISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANA 89

Query: 238 LVDMYAKC---------------GSMDEA-----RMIFHLMPEKNLIAWNIVISGHLQNG 277
           L+++  K                G ++ A     R +F  M E++ ++WN +I G  ++ 
Sbjct: 90  LLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHK 149

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA S+   M+R+G   D  TLSTVL   A    I     VH  ++K  F++D ++ +
Sbjct: 150 RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGS 209

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SLID Y  C  ++ ++K+F   S  D V   SM+  YAQ G  EEAL ++  M    + P
Sbjct: 210 SLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRP 269

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
                SSL+ A  NLS    GKQ+H ++I+  F  + F  +SL++MY KCG++D A R F
Sbjct: 270 VPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVF 329

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           + I    IVSW+AMI G A HG   EA  +F +M    V PNHIT ++VL AC+HAGLV 
Sbjct: 330 NGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVD 389

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
               +F SM  ++G  P  EH A + D LGRAG   EA   +  M  +  +SVW  LL A
Sbjct: 390 NGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA 449

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R++KN  + +  A+ +F +EP+   +HV+LSN+Y+++G W+  A++R+ M+   +KKEP
Sbjct: 450 CRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEP 509

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
             SWIEVK+K++ F   D+SH     I   L+  S+ + + GYVP +E  L D+EE +K 
Sbjct: 510 ACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKR 569

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
           ++L  HSEKLA+ FG+I+TPPG TIRV KNLR+CVDCH + +FISKIV+REI+VRDVNRF
Sbjct: 570 EVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRF 629

Query: 758 HHFRNGSCSCGGYW 771
           H F++G+CSCG +W
Sbjct: 630 HRFKDGNCSCGDFW 643



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 226/468 (48%), Gaps = 31/468 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV------------- 144
           SL + + +CAG G   L   +H  +I+ G  +D F+ANAL+++  K+             
Sbjct: 51  SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 110

Query: 145 --GNLEDAV-----AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
             G LE A       VF ++   D VSWN +I GC  H+ +  AL + ++M      P+ 
Sbjct: 111 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           FT ++ L   A     + G  +H   IK    +D  VG  L+DMYA C  MD +  +F  
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
             + + + WN +++G+ QNG   EA  +F  M + GV     T S+++ +  +   + + 
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQ+HA  ++  F  + +I +SLID Y KCG+V+ A ++F    + D+V+ T+MI  YA  
Sbjct: 291 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 350

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFA 436
           G   EA  L+  M+   + P+     ++L AC++    + G K  +    ++GF+     
Sbjct: 351 GPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEH 410

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQM--LE 493
             +L +   + G +D+A    SE+  +   S WS ++     H     A ++  ++  LE
Sbjct: 411 CAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELE 470

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
              + +H+ L ++  A   +G   EA      + K   I+ M++  AC
Sbjct: 471 PKSMGSHVILSNMYSA---SGRWNEAAQ----LRKSMRIKGMKKEPAC 511



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 245/540 (45%), Gaps = 82/540 (15%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNF--------------I 47
           LK+C       L   +H + + +G  +D F AN+L+ +  K   F              +
Sbjct: 56  LKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 115

Query: 48  DS------RRLFDAIPERSVVSWNSL-FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLS 100
           +S      R++FD + ER  VSWN+L   C  H    +EA+   +EM   G  P+ F+LS
Sbjct: 116 ESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRH-QEALSMVREMWRDGFMPDTFTLS 174

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           +++   A   D   G  +HGY+IK G+D+D+F  ++L+DMYA    ++ ++ VF      
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC 234

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           D V WN+++AG   +   + AL +F++M  + + P   T++S + A   + L  LG+QLH
Sbjct: 235 DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLH 294

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             LI+     +  +   L+DMY KCG++D AR +F+ +   ++++W  +I G+  +G   
Sbjct: 295 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 354

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  LF  M    V  +  T   VL + +           HA  V   ++      NS+ 
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACS-----------HAGLVDNGWK----YFNSMS 399

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + YG    +E                C ++     + G  +EA     EM+   I P S 
Sbjct: 400 NQYGFVPSLEH---------------CAALADTLGRAGDLDEAYNFISEMK---IKPTSS 441

Query: 401 VCSSLLNACA----NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV-NMYAKCGSIDDADR 455
           V S+LL AC      + A E  K++      F     +   + ++ NMY+  G  ++A +
Sbjct: 442 VWSTLLRACRVHKNTVLAEEVAKKI------FELEPKSMGSHVILSNMYSASGRWNEAAQ 495

Query: 456 AFSEIPDRGI-----VSWSAMIGGL----------AQHGRGKEALQMFG-QMLEDGVLPN 499
               +  +G+      SW  +   L            + R  +AL ++  QM+  G +PN
Sbjct: 496 LRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPN 555


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/668 (36%), Positives = 393/668 (58%), Gaps = 18/668 (2%)

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HG+ +K G   + F  + LV++YAK GN+EDA  VF+++   ++V+W  ++ G V +  
Sbjct: 86  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              A+ +FQ+M  +   P+++T ++ L AC+ ++  +LG Q H  +IK  +  D  VG  
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSA 205

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L  +Y+KCG +++A   F  + EKN+I+W   +S    NG  ++   LF  M  E +  +
Sbjct: 206 LCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPN 265

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + TL++ L       ++ +  QV +L +K  +ES+  + NSL+  Y K G + +A + F 
Sbjct: 266 EFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFN 325

Query: 358 ESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLEMQDREINPDSFVCSSLL 406
               V +V   +MI  +AQ              G EALK++ ++    + PD F  SS+L
Sbjct: 326 RMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVL 385

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
           + C+ + A EQG+Q+H   IK GF+SD     SL++MY KCGSI+ A +AF E+  R ++
Sbjct: 386 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMI 445

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           +W++MI G +QHG  ++AL +F  M   GV PN +T V VL AC+HAG+V++A ++FE M
Sbjct: 446 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIM 505

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
           +KK+ I+P+ +HY CM+D+  R G+ ++A+  +  M ++ +  +W   +   R + N+E+
Sbjct: 506 QKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLEL 565

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G +A+E L +++P+   T+VLL N+Y SA  +D+V++VR+ M+  K+ K    SWI +KD
Sbjct: 566 GFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKD 625

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA---GYVPMVETDLHDVEESEK-EQLLYH 702
           KVY+F   D++H  S  I   L+   DLL KA   GY  +   ++ D EE EK      +
Sbjct: 626 KVYSFKTNDKTHPPSSLICKSLE---DLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIY 682

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+ FGL   P  + IRV K+  IC D H   + +S +  REIIV+D  R H F N
Sbjct: 683 HSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVN 742

Query: 763 GSCSCGGY 770
           G CSCG +
Sbjct: 743 GECSCGNF 750



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 167/497 (33%), Positives = 264/497 (53%), Gaps = 23/497 (4%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L+ C  K+  + G Q VHG V+ TG   + FV + LV +YAKCGN  D+RR+F+ +P R
Sbjct: 70  LLQQCLDKRS-YSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRR 128

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VV+W +L   +V     + A+  F+EM+ +G  P+ ++LS++++AC+      LG + H
Sbjct: 129 NVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFH 188

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            Y IK   D D    +AL  +Y+K G LEDA+  F  I   +++SW + ++ C  +    
Sbjct: 189 AYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPV 248

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL-IKMEIKSDPIVGVGL 238
             L+LF +M S +I PN FT TSAL  C  +   ELG Q+ CSL IK   +S+  V   L
Sbjct: 249 KGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQV-CSLCIKFGYESNLRVRNSL 307

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ------------NGGDMEAASLF 286
           + +Y K G + EA   F+ M + +++ WN +I+GH Q              G  EA  +F
Sbjct: 308 LYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS-EALKIF 366

Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
             + + G+  D  TLS+VL   +   AI   +Q+HA ++KT F SD  +  SLI  Y KC
Sbjct: 367 SKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKC 426

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G +E A K F E S   ++A TSMIT ++Q G+ ++AL ++ +M    + P++     +L
Sbjct: 427 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVL 486

Query: 407 NACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PD 462
           +AC++     Q      +   K+           +V+M+ + G ++ A     ++   P 
Sbjct: 487 SACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 546

Query: 463 RGIVSWSAMIGGLAQHG 479
             I  WS  I G   HG
Sbjct: 547 EFI--WSNFIAGCRSHG 561



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 190/366 (51%), Gaps = 13/366 (3%)

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H D+   L    + +E    +F Y   L+ C         + +H  ++K     +  V  
Sbjct: 45  HLDFGEALLLNKEGTEEEEKLF-YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMS 103

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LV++YAKCG+M++AR +F  MP +N++AW  ++ G +QN     A  +F  M   G   
Sbjct: 104 FLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYP 163

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              TLS VL + +S Q++ +  Q HA  +K   + D  + ++L   Y KCG +EDA+K F
Sbjct: 164 SIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAF 223

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 ++++ TS ++A    G   + L+L++EM   +I P+ F  +S L+ C  + + E
Sbjct: 224 SRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLE 283

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G QV    IKFG+ S+    NSL+ +Y K G I +A R F+ + D  +V+W+AMI G A
Sbjct: 284 LGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHA 343

Query: 477 QH-----------GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFE 524
           Q             RG EAL++F ++ + G+ P+  TL SVL  C+    + + +  H +
Sbjct: 344 QMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQ 403

Query: 525 SMEKKF 530
           +++  F
Sbjct: 404 TIKTGF 409


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/574 (40%), Positives = 350/574 (60%), Gaps = 2/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y + L AC        G+++H  +IK        +   L+  Y KC  +++AR +   MP
Sbjct: 54  YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           EKN+++W  +IS + Q G   EA S+F  M R     ++ T +TVL S      + + KQ
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H L VK  ++S  ++ +SL+D Y K G +E+A +IF+     D+V+CT++I  YAQ GL
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL+++  +Q   + P+    +SLL A + L+  + GKQ H H+++          NS
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML-EDGVLP 498
           L++MY+KCG++  A R F  +P+R  +SW+AM+ G ++HG G+E L++F  M  E  V P
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           + +TL++VL  C+H  +       ++ M   ++GI+P  EHY C++D+LGRAG+  EA E
Sbjct: 354 DAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFE 413

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MP +  A V G+LLGA R++ +V++G++    L  IEPE +  +V+LSN+YASAG 
Sbjct: 414 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGR 473

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W++V  VR  M    + KEPG SWI+ +  ++ F   DR+H R +E+ AK+ E+S  + +
Sbjct: 474 WEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 533

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGYVP +   L+DV+E +KE++L  HSEKLA+ FGLI T  G  IRV KNLRICVDCH  
Sbjct: 534 AGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNF 593

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +  SK+  RE+ +RD NRFH    G CSCG YW
Sbjct: 594 AKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 234/459 (50%), Gaps = 42/459 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC  K+ L  G +VH  ++ T +    ++   L++ Y KC    D+R++ D +PE++
Sbjct: 57  LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y       EA+  F EM+ S  +PNEF+ ++++ +C  +    LG++IHG
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHG 176

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K  YDS +F  ++L+DMYAK G +E+A  +F+ +   D+VS  A+IAG      ++ 
Sbjct: 177 LIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 236

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++FQ+++S  + PN  TY S L A +G+ L + G+Q HC +++ E+    ++   L+D
Sbjct: 237 ALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 296

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCG++  A+ +F  MPE+  I+WN ++ G+ ++G   E   LF  M  E  V  D  
Sbjct: 297 MYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 356

Query: 300 TLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           TL  VL   S    +  G+      ++ +   + D      ++D  G+ G +++A +  K
Sbjct: 357 TLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIK 416

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
              +                                   P + V  SLL AC    + + 
Sbjct: 417 RMPS----------------------------------KPTAGVLGSLLGACRVHLSVDI 442

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDAD 454
           G+ V   +I+   +    AGN ++  N+YA  G  +D +
Sbjct: 443 GEYVGHRLIE---IEPENAGNYVILSNLYASAGRWEDVN 478



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 202/390 (51%), Gaps = 6/390 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA+    EMV+ G         +++NAC        G+++H + IK  Y    +    
Sbjct: 35  LQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTR 91

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+  Y K   LEDA  V  ++   ++VSW A+I+      H+  AL +F +M  S+  PN
Sbjct: 92  LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPN 151

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            FT+ + L +C       LG+Q+H  ++K    S   VG  L+DMYAK G ++EAR IF 
Sbjct: 152 EFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFE 211

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +PE+++++   +I+G+ Q G D EA  +F  +  EG+  +  T +++L +++    +  
Sbjct: 212 CLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDH 271

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            KQ H   ++        + NSLID Y KCG++  A ++F        ++  +M+  Y++
Sbjct: 272 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSK 331

Query: 377 FGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSD 433
            GLG E L+L+  M+D + + PD+    ++L+ C++    + G  ++  ++  ++G   D
Sbjct: 332 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPD 391

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           T     +V+M  + G ID+A      +P +
Sbjct: 392 TEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/662 (38%), Positives = 356/662 (53%), Gaps = 77/662 (11%)

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           L   ++     P+     +A K+C  + L    R LH       +  DP V   L+  Y 
Sbjct: 7   LHHFLRHVSFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAYL 63

Query: 244 KCGSMDEARMIFHLMP--------------------------------------EKNLIA 265
           + G+   AR +F  MP                                      E N+I 
Sbjct: 64  RLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVIT 123

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           WN ++SG  ++G   +A      M+ EG+   D T +S  L +V     + V +Q+H  +
Sbjct: 124 WNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYA 183

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC----------------- 367
           VK    +D  +V +LID YGKCG   + V++F ESS +D+ +C                 
Sbjct: 184 VKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243

Query: 368 ------------------TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
                             TS++    Q G   EA++ + EMQ +   P+S     +L A 
Sbjct: 244 RLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAF 303

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           AN++A   G+  H   ++ GF+ D +  ++LV+MYAKCG + DA   F  +  R +VSW+
Sbjct: 304 ANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWN 363

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AMIGG A +G    A+ MF  ML+    P+ +T   +L AC  AGL  E +H+F+ M  +
Sbjct: 364 AMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNE 423

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           +G+ P  EHYACM+ +LGRAGK  EA +L+  MPF+ +A +WG+LLG+ R++ NV++ + 
Sbjct: 424 YGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEV 483

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           AAE LF +EPE +  +VLLSNIYAS  MWD V +VR  MKD  LKKE G SWIE+K+KV+
Sbjct: 484 AAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVH 543

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
               GD SH     I  K+++++  + K G+VP  +  LHDVEE EK+ +L  HSEKLAV
Sbjct: 544 MLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAV 603

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           A GLI+T PG T+RV KNLRIC DCH + +FIS    REI VRD NRFHHF  G CSCG 
Sbjct: 604 ALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGD 663

Query: 770 YW 771
           +W
Sbjct: 664 FW 665



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 221/550 (40%), Gaps = 135/550 (24%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--ER 59
            K+C +   L L   +H +   +G   D FVA+SL+  Y + G   ++R LFD +P  +R
Sbjct: 27  FKSCPT---LPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQR 83

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG---------------------------- 91
           +VV W++L + +      E A    +EM   G                            
Sbjct: 84  TVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVA 143

Query: 92  ---------IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA 142
                    +RP+   +S  ++A    G   +G+++HGY++K G  +D     AL+DMY 
Sbjct: 144 LATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYG 203

Query: 143 KVGNLEDAVAVFKDIEHPD-----------------------------------IVSWNA 167
           K G   + V VF +  H D                                   +VSW +
Sbjct: 204 KCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTS 263

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           ++A CV +  +  A++ F++M++    PN  T    L A A +     GR  HC  ++  
Sbjct: 264 IVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKG 323

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
              D  V   LVDMYAKCG + +AR+IF  M  +N+++WN +I G+              
Sbjct: 324 FLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYA------------- 370

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            MY E V            +V  F ++  CKQ          + D      L+ A  + G
Sbjct: 371 -MYGEAV-----------NAVWMFHSMLKCKQ----------KPDMVTFTCLLAACTQAG 408

Query: 348 HVEDAVKIFKE-------SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             E+    FKE       S  ++  AC  M+T   + G  +EA  L   + D    PD++
Sbjct: 409 LTEEGRHYFKEMHNEYGVSPRMEHYAC--MVTLLGRAGKLDEAYDL---ISDMPFEPDAY 463

Query: 401 VCSSLLNAC---ANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADR 455
           +  SLL +C    N+   E   +      K   +    AGN   L N+YA     D  +R
Sbjct: 464 IWGSLLGSCRVHGNVDLAEVAAE------KLFHLEPENAGNYVLLSNIYASKKMWDRVNR 517

Query: 456 AFSEIPDRGI 465
               + D G+
Sbjct: 518 VREMMKDVGL 527



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 186/442 (42%), Gaps = 76/442 (17%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAG 171
           L R +H  +   G   D F A++L+  Y ++G   +A A+F  +  P   +V W+A++A 
Sbjct: 35  LARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAA 94

Query: 172 CVLHEHNDWALKLFQQMK-SSEINPNMFTY------------------------------ 200
                  + A +L ++M+    + PN+ T+                              
Sbjct: 95  HAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLR 154

Query: 201 ------TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
                 + AL A   + L  +G+QLH   +K   ++D  V   L+DMY KCG   E   +
Sbjct: 155 PDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRV 214

Query: 255 F----HL-------------------------------MPEKNLIAWNIVISGHLQNGGD 279
           F    H+                                 E N+++W  +++  +QNG D
Sbjct: 215 FDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKD 274

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           +EA   F  M  +G   +  T+  VL + A+  A+   +  H  +++  F  D Y+ ++L
Sbjct: 275 LEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSAL 334

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG V+DA  IF    + ++V+  +MI  YA +G    A+ ++  M   +  PD 
Sbjct: 335 VDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDM 394

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
              + LL AC      E+G+     +  ++G          +V +  + G +D+A    S
Sbjct: 395 VTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLIS 454

Query: 459 EIP-DRGIVSWSAMIGGLAQHG 479
           ++P +     W +++G    HG
Sbjct: 455 DMPFEPDAYIWGSLLGSCRVHG 476



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 8/186 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A  +   L  G   H   +  GF  D +V+++LV MYAKCG   D+R +FD +  R+
Sbjct: 299 VLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRN 358

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR---- 116
           VVSWN++   Y        AV  F  M+    +P+  + + ++ AC  +G +  GR    
Sbjct: 359 VVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFK 418

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
           ++H    + G    M     +V +  + G L++A  +  D+   PD   W +++  C +H
Sbjct: 419 EMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVH 475

Query: 176 EHNDWA 181
            + D A
Sbjct: 476 GNVDLA 481


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/702 (35%), Positives = 388/702 (55%), Gaps = 49/702 (6%)

Query: 118  IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            +H   +K G    +  AN L+ +YAK  N+  A  +F +I   +  +W  +I+G      
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 178  NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            ++    LF++M++    PN +T +S LK C+     +LG+ +H  +++  I  D ++G  
Sbjct: 371  SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 238  LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF---PW------ 288
            ++D+Y KC   + A  +F LM E ++++WNI+I  +L+ G   ++  +F   P+      
Sbjct: 431  ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 289  ----------------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
                                  M   G  F   T S  L   +S   + + +Q+H + +K
Sbjct: 491  NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 327  TAFESDDYIVNSLIDAYGKCGHVEDAVKI-----------------FKESSAVDLVACTS 369
              F+SD +I +SL++ Y KCG ++ A  I                 +KE  A  +V+  S
Sbjct: 551  FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKA-GIVSWGS 609

Query: 370  MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
            M++ Y   G  E+ LK +  M    +  D    +++++ACAN    E G+ VH ++ K G
Sbjct: 610  MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIG 669

Query: 430  FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
               D + G+SL++MY+K GS+DDA   F +  +  IV W++MI G A HG+G  A+ +F 
Sbjct: 670  HRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFE 729

Query: 490  QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            +ML  G++PN +T + VL AC+HAGL+ E   +F  M+  + I P  EH   M+D+ GRA
Sbjct: 730  EMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRA 789

Query: 550  GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
            G   +    +         SVW + L + R++KNVE+G+  +EML  + P     +VLLS
Sbjct: 790  GHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLS 849

Query: 610  NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
            N+ AS   WD  A+VR  M    +KK+PG SWI++KD+++TF +GDRSH +  EIY+ LD
Sbjct: 850  NMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLD 909

Query: 670  EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
             +   L + GY   V+  + DVEE + E L+ HHSEKLAV FG+I T     IR+ KNLR
Sbjct: 910  ILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLR 969

Query: 730  ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IC DCH   ++ S+++ REIIVRD++RFHHF++GSCSCG YW
Sbjct: 970  ICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 257/554 (46%), Gaps = 66/554 (11%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H + V  G       AN L+ +YAK  N   +++LFD IP+R+  +W  L S +     
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
            E     F+EM   G  PN+++LSS++  C+   +  LG+ +H + ++ G D D+   N+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP- 195
           ++D+Y K    E A  +F+ +   D+VSWN +I   +     + +L +F+++   ++   
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 196 ------------------------------NMFTYTSALKACAGMELKELGRQLHCSLIK 225
                                         +  T++ AL   + +   ELGRQLH  ++K
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIF----------------HLMPEKNLIAWNIV 269
               SD  +   LV+MY KCG MD+A +I                 +  P+  +++W  +
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           +SG++ NG   +    F  M RE V  D  T++T++ + A+   +   + VHA   K   
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH 670

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D Y+ +SLID Y K G ++DA  +F++S+  ++V  TSMI+ YA  G G  A+ L+ E
Sbjct: 671 RIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEE 730

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN-------SLVN 442
           M ++ I P+      +LNAC++    E+G +       F  M D +  N       S+V+
Sbjct: 731 MLNQGIIPNEVTFLGVLNACSHAGLIEEGCRY------FRMMKDAYCINPGVEHCTSMVD 784

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLP 498
           +Y + G +        +     + S W + +     H     GK   +M  Q+      P
Sbjct: 785 LYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSD--P 842

Query: 499 NHITLVSVLCACNH 512
               L+S +CA NH
Sbjct: 843 GAYVLLSNMCASNH 856



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 214/478 (44%), Gaps = 66/478 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD------ 54
           VLK C+   +L LG  VH  ++  G D D  + NS++ +Y KC  F  + RLF+      
Sbjct: 396 VLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGD 455

Query: 55  -------------------------AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     +P + VVSWN++    + C +   A+     MV 
Sbjct: 456 VVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVE 515

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G   +  + S  +   +      LGR++HG  +K G+DSD F  ++LV+MY K G ++ 
Sbjct: 516 CGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDK 575

Query: 150 AVAVFKDI--------------EHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           A  + +D+              + P   IVSW ++++G V +   +  LK F+ M    +
Sbjct: 576 ASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELV 635

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             ++ T T+ + ACA   + E GR +H  + K+  + D  VG  L+DMY+K GS+D+A M
Sbjct: 636 VVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWM 695

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F    E N++ W  +ISG+  +G  M A  LF  M  +G+  ++ T   VL + +    
Sbjct: 696 VFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGL 755

Query: 314 IGV-CKQVHALSVKTAFESDDYIVN-------SLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           I   C+    +        D Y +N       S++D YG+ GH+        ++    L 
Sbjct: 756 IEEGCRYFRMM-------KDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLT 808

Query: 366 ACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGKQV 421
           +      +  +     E  K   EM  Q    +P ++V  S  N CA+   +++  +V
Sbjct: 809 SVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLS--NMCASNHRWDEAARV 864


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/658 (36%), Positives = 384/658 (58%), Gaps = 7/658 (1%)

Query: 42  KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLS 100
           K G+  ++R+LFD + +R  +SW ++ S YV+     EA+  F +M V  G+  + F LS
Sbjct: 13  KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
             + AC  +     G  +HGYS+K  + + +F  +ALVDMY K+G +++   VFK++   
Sbjct: 73  LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+IAG V   +N  AL  F  M   ++  + +T++SALKACA       GR++H
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH 192

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
           C  +K    +   V   L  MY KCG +D    +F  M ++++++W  +I  ++Q G + 
Sbjct: 193 CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEE 252

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
            A   F  M    V  ++ T + V+   A+   I   +Q+HA  ++        + NS++
Sbjct: 253 NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y KC  ++ A  +F+  S  D+++ ++MI+ YAQ G GEEA      M+     P+ F
Sbjct: 313 AMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF 372

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+L+ C N++  EQGKQ+H H++  G   +T   ++L+NMY+KCGSI +A + F E 
Sbjct: 373 AFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEA 432

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
               IVSW+AMI G A+HG  +EA+ +F ++ + G+ P+ +T ++VL AC+HAGLV    
Sbjct: 433 EYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGF 492

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
           H+F S+ K   I P ++HY CMID+L RAG+  +A  ++ +MPFQ +  VW  LL A RI
Sbjct: 493 HYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRI 552

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           + +V+ G+ AAE +  ++P  + TH+ L+N+YA+ G W   A+VR+ MK   + KEPG S
Sbjct: 553 HGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWS 612

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD--LHDVEESEK 696
           WI+ KD+V  F  GDRSH   + IY    +V DLL     + M E D  L++V+ES++
Sbjct: 613 WIKFKDRVSAFVSGDRSHPEGEYIY----DVLDLLASQAEMHMQEMDFLLNEVQESQR 666



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 274/531 (51%), Gaps = 10/531 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC     +  G  +HG  V T F +  FV ++LV MY K G   +   +F  +P R+V
Sbjct: 75  LKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNV 134

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ +  V   + +EA+ +F +M +  +  + ++ SS + ACA SG    GR+IH  
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQ 194

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K G+ +  F AN L  MY K G L+  + +F+ +   D+VSW  +I   V     + A
Sbjct: 195 TLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENA 254

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           +K F++M+ ++++PN FT+ + +  CA +   E G QLH  +I+  +     V   ++ M
Sbjct: 255 VKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAM 314

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KC  +D A  +F  +  +++I+W+ +ISG+ Q G   EA     WM REG   ++   
Sbjct: 315 YSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAF 374

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           ++VL    +   +   KQ+HA  +    E +  + ++LI+ Y KCG +++A KIF E+  
Sbjct: 375 ASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEY 434

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++V+ T+MI  YA+ G  +EA+ L+ ++    + PDS    ++L AC++    + G   
Sbjct: 435 NNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHY 494

Query: 422 HVHIIKFGFM---SDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
              + K   +    D +    ++++  + G ++DA+     +P  R  V WS ++     
Sbjct: 495 FNSLSKVHQICPSKDHYG--CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRI 552

Query: 478 HGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
           HG    GK A +   Q L+      HITL ++  A       AE +   +S
Sbjct: 553 HGDVDCGKRAAEKILQ-LDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKS 602



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 234/449 (52%), Gaps = 9/449 (2%)

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           M   N ++    K G+L +A  +F  +   D +SW  +I+G V   +   AL LF +M  
Sbjct: 1   MQEINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKM-- 58

Query: 191 SEINPNM----FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
             + P +    F  + ALKAC        G  LH   +K +  +   VG  LVDMY K G
Sbjct: 59  -WVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIG 117

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +DE  ++F  MP +N+++W  +I+G ++ G + EA + F  M+ + VG D  T S+ LK
Sbjct: 118 KVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALK 177

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + A   A+   +++H  ++K  F +  ++ N+L   Y KCG ++  +++F+  +  D+V+
Sbjct: 178 ACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVS 237

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T++I +  Q G  E A+K +  M++ +++P+ F  +++++ CA L   E G+Q+H H+I
Sbjct: 238 WTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVI 297

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           + G +      NS++ MY+KC  +D A   F  +  R I+SWS MI G AQ G G+EA  
Sbjct: 298 RRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFD 357

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
               M  +G  PN     SVL  C +  ++ + K    +     G++      + +I++ 
Sbjct: 358 YLSWMRREGPRPNEFAFASVLSVCGNMAILEQGK-QLHAHVLCVGLEQNTMVQSALINMY 416

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALL 575
            + G  +EA ++ D   +  N   W A++
Sbjct: 417 SKCGSIKEASKIFDEAEYN-NIVSWTAMI 444



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 145/272 (53%), Gaps = 2/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C +   +  G Q+H  V+  G      VANS++ MY+KC     +  +F  +  R 
Sbjct: 276 VISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRD 335

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ S Y      EEA  +   M   G RPNEF+ +S+++ C        G+++H 
Sbjct: 336 IISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHA 395

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + + +G + +    +AL++MY+K G++++A  +F + E+ +IVSW A+I G   H ++  
Sbjct: 396 HVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQE 455

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LV 239
           A+ LF+++    + P+  T+ + L AC+   L +LG     SL K+          G ++
Sbjct: 456 AIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMI 515

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           D+  + G +++A  +   MP +++ + W+ ++
Sbjct: 516 DLLCRAGRLNDAESMIQSMPFQRDDVVWSTLL 547


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/753 (34%), Positives = 420/753 (55%), Gaps = 22/753 (2%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F  D  + N +V  Y KCG   D+R +F +I   +V SW  L + Y      +  +   +
Sbjct: 112 FAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY---SIKLGYDSDMFSANALVDMYA 142
           +M L G+ PN  +L+++I A +  G+    RKIH     + +L YD  + +A  L+DMYA
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTA--LIDMYA 229

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K G++  A  VF    + D+   NA+I+  +   +   A+  F +++ S + PN  TY  
Sbjct: 230 KCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYAL 289

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
             +ACA   +    R  H   I  +++ D +V   LV MY++CGS+++AR +F  MP KN
Sbjct: 290 LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKN 349

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           ++ WN++I+G+ Q G   EA  L+  M   GV  D+ T   VL+S +  + +   + +H 
Sbjct: 350 VVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLG 380
             V   ++S   ++++LI  Y  CG + DAV +F +  ++   +++ T+M+TA  + G G
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
             AL L+ +M    +  +     S ++AC+++ A  +G  +   +I  G + D   G SL
Sbjct: 470 RSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSL 529

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           +N+Y KCG +D A   F  +  + IV+W+ ++   +Q+G    + ++  +M  DG  PN 
Sbjct: 530 INLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNE 589

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +TL+++L  C+H GLVA+A  +F SM     + P  EHY C++D+LGR+G+ +E    + 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
           + PF  ++ +W +LLG+  I+ +VE G  AA  +  ++P+ +S +VLLSN++A+ GM D 
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V  + +   +  +KKE   S+IEV   V+ F V    H   ++I A+L E S+ + +AG+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           VP     LHDV          +H EKLA+AFG I++PPG  + V KNLR+CV CH   + 
Sbjct: 770 VP-----LHDVRG--------YHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 741 ISKIVSREIIVRDVNRFHHFR--NGSCSCGGYW 771
           I K+  R+I VR+ NR HHFR  + SCSCG YW
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/531 (25%), Positives = 238/531 (44%), Gaps = 78/531 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC +          H   + +    D  V  +LV MY++CG+  D+RR+FD +P ++
Sbjct: 290 LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKN 349

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN + + Y    + +EA+  +  M  +G+ P+E +  +++ +C+ +     GR IH 
Sbjct: 350 VVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHPDIVSWNAVIAGCVLHEHN 178
           + +  GYDS +   +AL+ MY+  G+L DAV VF      H  ++SW A++     +   
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF++M    +  N+ T+ S + AC+ +     G  +   +I      D ++G  L
Sbjct: 470 RSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSL 529

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +++Y KCG +D A  +FH +  KN++ WN +++   QNG +  +  L   M  +G   ++
Sbjct: 530 INLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNE 589

Query: 299 TTLSTVL----------KSVASFQAI--GVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
            TL  +L          K+V+ F+++  G C       V T   S+ Y    L+D  G+ 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCL------VPT---SEHY--GCLVDLLGRS 638

Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
           G +E+ V+ F  S    L                                 DS +  SLL
Sbjct: 639 GQLEE-VEAFISSKPFSL---------------------------------DSVLWMSLL 664

Query: 407 NACANLSAYEQGKQVHVHII--------KFGFMSDTFAG-------NSLVNMYAKCGSID 451
            +C   S  E+G +    ++         +  +S+ FA         SL  +  +     
Sbjct: 665 GSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKK 724

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGR--GKEALQMFGQMLEDGVLPNH 500
           +  R++ E+   G+V    +  GL + G   G +  +   +M E G +P H
Sbjct: 725 EQSRSYIEV--NGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVPLH 773



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 161/340 (47%), Gaps = 14/340 (4%)

Query: 295 GF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           GF D     ++LK      A+    Q H +S    F  D  ++N +++AYGKCG V+DA 
Sbjct: 79  GFVDPAAYVSLLKQSGDVTALKTI-QAH-ISHSKRFAGDRLLLNCVVEAYGKCGCVKDAR 136

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +F      ++ + T ++ AYAQ G  +  L+L  +M    + P++   ++++ A + L 
Sbjct: 137 LVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELG 196

Query: 414 AYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            +++ +++H        ++ D     +L++MYAKCG I  A+  F +  ++ +   +AMI
Sbjct: 197 NWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMI 256

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK-HHFESMEKKFG 531
               Q G   +A+  F ++   G+ PN +T   +  AC   G+ ++A+  H   +  K  
Sbjct: 257 SAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSK-- 314

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG--AARIYKNVEVGQH 589
           ++P       ++ +  R G  ++A  + D MP + N   W  ++   A   Y +  +  +
Sbjct: 315 LRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGK-NVVTWNVMIAGYAQEGYTDEALQLY 373

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
            +     +EP++    +   N+  S  + +++A  R   K
Sbjct: 374 VSMEAAGVEPDE----ITFVNVLESCSLAEHLAAGRDIHK 409


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/686 (36%), Positives = 395/686 (57%), Gaps = 8/686 (1%)

Query: 94  PNEFSLSSMINAC--AGSGDSL-LGRKIHGYSI---KLGYDSDMFSANALVDMYAKVGNL 147
           P+  SL  ++N    + +  SL  G+ IH   +   +   DSD+   N+L+++Y+K G  
Sbjct: 18  PHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQS 77

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKA 206
           + A  +F  +   ++VSW+A++ G +        L LF+ + S     PN + +T  L  
Sbjct: 78  KCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSC 137

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     + G+Q H  L+K  +     V   L+ MY++C  +D A  I   +P  ++ ++
Sbjct: 138 CADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSY 197

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N ++S  +++G   EAA +   M  E V +D  T  +VL   A  + + +  Q+HA  +K
Sbjct: 198 NSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLK 257

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           T    D ++ ++LID YGKCG V +A K F      ++VA T+++TAY Q G  EE L L
Sbjct: 258 TGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNL 317

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           + +M+  +  P+ F  + LLNACA+L A   G  +H  I+  GF +    GN+L+NMY+K
Sbjct: 318 FTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSK 377

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
            G+ID +   FS + +R +++W+AMI G + HG GK+AL +F  M+  G  PN++T + V
Sbjct: 378 SGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGV 437

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP-FQ 565
           L AC H  LV E  ++F+ + KKF ++P  EHY CM+ +LGRAG   EA   + T    +
Sbjct: 438 LSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVK 497

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
            +   W  LL A  I++N  +G+   E +  ++P    T+ LLSN++A A  WD V K+R
Sbjct: 498 WDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIR 557

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
           + MK+  +KKEPG SW+++++  + F     +H  S +I+ K+ ++  ++   GY P V 
Sbjct: 558 KLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVG 617

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             LHDVE+ +KE  L HHSEKLA+A+GL+  PP   IR+ KNLR+C DCH + + ISK  
Sbjct: 618 VVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKAT 677

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
           +R IIVRD NRFHHFR G C+C  +W
Sbjct: 678 NRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 252/501 (50%), Gaps = 10/501 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVF---TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +LK   + K L  G  +H  +V    T  DSD    NSL+ +Y+KCG    +R+LFD + 
Sbjct: 29  LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGR 116
           +R+VVSW++L   Y+H   + E +  F+ +V L    PNE+  + +++ CA SG    G+
Sbjct: 89  QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGK 148

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           + HGY +K G     +  NAL+ MY++  +++ A+ +   +   D+ S+N++++  V   
Sbjct: 149 QCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESG 208

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A ++ ++M    +  +  TY S L  CA +   +LG Q+H  L+K  +  D  V  
Sbjct: 209 CRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSS 268

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+D Y KCG +  AR  F  + ++N++AW  V++ +LQNG   E  +LF  M  E    
Sbjct: 269 TLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRP 328

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++ T + +L + AS  A+     +H   V + F++   + N+LI+ Y K G+++ +  +F
Sbjct: 329 NEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVF 388

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 D++   +MI  Y+  GLG++AL ++ +M      P+      +L+AC +L+  +
Sbjct: 389 SNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQ 448

Query: 417 QGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR--GIVSWSAMIG 473
           +G      I+ KF           +V +  + G +D+A+            +V+W  ++ 
Sbjct: 449 EGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLN 508

Query: 474 GLAQH---GRGKEALQMFGQM 491
               H     GK+  +   QM
Sbjct: 509 ACHIHRNYNLGKQITETVIQM 529


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 279/856 (32%), Positives = 424/856 (49%), Gaps = 144/856 (16%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H  ++ +G D+  F+ N+L+ MY+ CG   D+ R+F      ++ +WN++   +    
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSG 84

Query: 76  FLEEAVCFFKEM------------VLSGIRPN-------------------------EFS 98
            + EA   F EM            ++SG   N                          FS
Sbjct: 85  RMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFS 144

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
            +  + AC     +    ++H + IKL   +     N+LVDMY K G +  A  VF +IE
Sbjct: 145 YTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIE 204

Query: 159 HPDIVSWNAVIAGC--------VLH--------EHNDW---------------ALKLFQQ 187
            P +  WN++I G          LH        +H  W                L  F +
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVE 264

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M +    PN  TY S L ACA +   + G  LH  +++ME   D  +G GL+DMYAKCG 
Sbjct: 265 MCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGC 324

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +  AR +F+ + E+N ++W  +ISG  Q G   +A +LF  M +  V  D+ TL+T+L  
Sbjct: 325 LALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGV 384

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            +        + +H  ++K+  +S   + N++I  Y +CG  E A   F+     D ++ 
Sbjct: 385 CSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISW 444

Query: 368 TSMITA-------------------------------YAQFGLGEEALKLYLEMQDREIN 396
           T+MITA                               Y Q G  EE +KLY+ M+ + + 
Sbjct: 445 TAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVK 504

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD    ++ + ACA+L+  + G QV  H+ KFG  SD    NS+V MY++CG I +A + 
Sbjct: 505 PDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKV 564

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  I  + ++SW+AM+   AQ+G G +A++ +  ML     P+HI+ V+VL         
Sbjct: 565 FDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS-------- 616

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
                                      D+LGRAG   +A  L+D MPF+ NA+VWGALLG
Sbjct: 617 ---------------------------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLG 649

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A RI+ +  + + AA+ L  +  E S  +VLL+NIYA +G  +NVA +R+ MK   ++K 
Sbjct: 650 ACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKS 709

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG-YVPMVETDLHDVEESE 695
           PG SWIEV ++V+ FTV + SH +  E+Y KL+E+   +   G YV +V         S+
Sbjct: 710 PGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSC----AHRSQ 765

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K     +HSEKLA AFGL++ PP   I+V KNLR+C DCH   + +S + SRE+I+RD  
Sbjct: 766 K-----YHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGF 820

Query: 756 RFHHFRNGSCSCGGYW 771
           RFHHF++G CSC  YW
Sbjct: 821 RFHHFKDGFCSCRDYW 836



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 206/460 (44%), Gaps = 62/460 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNF---------IDSRR 51
            +KAC         LQ+H  V+     +   + NSLV MY KCG           I+S  
Sbjct: 148 TMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPS 207

Query: 52  L----------------------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           L                      F  +PER  VSWN+L S +         +  F EM  
Sbjct: 208 LFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCN 267

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G +PN  +  S+++ACA   D   G  +H   +++ +  D F  + L+DMYAK G L  
Sbjct: 268 LGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLAL 327

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF  +   + VSW  +I+G       D AL LF QM+ + +  + FT  + L  C+G
Sbjct: 328 ARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSG 387

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC------------------------ 245
                 G  LH   IK  + S   VG  ++ MYA+C                        
Sbjct: 388 QNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAM 447

Query: 246 -------GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
                  G +D AR  F +MPE+N+I WN ++S ++Q+G   E   L+  M  + V  D 
Sbjct: 448 ITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDW 507

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T +T +++ A    I +  QV +   K    SD  + NS++  Y +CG +++A K+F  
Sbjct: 508 VTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDS 567

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
               +L++  +M+ A+AQ GLG +A++ Y +M   E  PD
Sbjct: 568 IHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPD 607



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 194/396 (48%), Gaps = 38/396 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC S  DL  G  +H  ++      D F+ + L+ MYAKCG    +RR+F+++ E++
Sbjct: 280 VLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQN 339

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW  L S        ++A+  F +M  + +  +EF+L++++  C+G   +  G  +HG
Sbjct: 340 QVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHG 399

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD------------------- 161
           Y+IK G DS +   NA++ MYA+ G+ E A   F+ +   D                   
Sbjct: 400 YAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDR 459

Query: 162 ------------IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
                       +++WN++++  + H  ++  +KL+  M+S  + P+  T+ ++++ACA 
Sbjct: 460 ARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACAD 519

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +LG Q+   + K  + SD  V   +V MY++CG + EAR +F  +  KNLI+WN +
Sbjct: 520 LATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAM 579

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ++   QNG   +A   +  M R     D  +   VL  +      G+  Q   L     F
Sbjct: 580 MAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDL--LGRAGLLDQAKNLIDGMPF 637

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           + +  +  +L+   G C    D+  I  E++A  L+
Sbjct: 638 KPNATVWGALL---GACRIHHDS--ILAETAAKKLM 668



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 213/507 (42%), Gaps = 80/507 (15%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +  A K C       + R+LH  LI   + +   +   L+ MY+ CG +D+A  +F    
Sbjct: 10  FYDAFKLCGS---PPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREAN 66

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLF---PWMYREGVGF-------------------- 296
             N+  WN ++     +G   EA +LF   P + R+ V +                    
Sbjct: 67  HANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTF 126

Query: 297 --------------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
                         D  + +  +K+     +     Q+HA  +K    +   I NSL+D 
Sbjct: 127 MSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDM 186

Query: 343 YGKCGHVE-------------------------------DAVKIFKESSAVDLVACTSMI 371
           Y KCG +                                +A+ +F      D V+  ++I
Sbjct: 187 YIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLI 246

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
           + ++Q+G G   L  ++EM +    P+     S+L+ACA++S  + G  +H  I++    
Sbjct: 247 SVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHS 306

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D F G+ L++MYAKCG +  A R F+ + ++  VSW+ +I G+AQ G   +AL +F QM
Sbjct: 307 LDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQM 366

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
            +  V+ +  TL ++L  C+     A  +        K G+         +I +  R G 
Sbjct: 367 RQASVVLDEFTLATILGVCSGQNYAATGE-LLHGYAIKSGMDSFVPVGNAIITMYARCGD 425

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS--STHVLLS 609
            ++A     +MP +   S W A++ A     +++  +   +M+    PE++  + + +LS
Sbjct: 426 TEKASLAFRSMPLRDTIS-WTAMITAFSQNGDIDRARQCFDMM----PERNVITWNSMLS 480

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKE 636
             Y   G  +   K+   M+   +K +
Sbjct: 481 T-YIQHGFSEEGMKLYVLMRSKAVKPD 506


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/601 (38%), Positives = 362/601 (60%), Gaps = 33/601 (5%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+ACA  +   +G++LHC +IK  I     +   L++MY KCG + +A  +F+ +P ++ 
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           I+W  +++ + Q        S+FP M+++ G+  D    + ++K+ A   A+   KQVHA
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             + +    DD + +SL+D Y KCG  +    +F   S+ + ++ T+MI+ YAQ G   +
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189

Query: 383 ALKLY-------------------------------LEMQDREIN-PDSFVCSSLLNACA 410
           A++L+                               +EM+ + I+  D F+ SS++ A A
Sbjct: 190 AIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASA 249

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           NL+    GKQ+H  +I  G+ S  F  N+LV+MYAKC  +  A + F  +  R IVSW++
Sbjct: 250 NLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTS 309

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           +I G AQHG  +EAL ++ +ML  G+ PN +T V ++ AC+H GLV++ ++ F SM K +
Sbjct: 310 IIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDY 369

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           GI P  +HY C++D+L R+G  +EA  L+  MPF+ + + W ALL A   ++N  +G   
Sbjct: 370 GINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRV 429

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           A+ L +++PE  ST++LLSNIYASA MW++V+KVRR M   ++KKEPG S I +  +   
Sbjct: 430 ADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQV 489

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           F  G+ SH   +EI+  L+E+   + K GY+P   + LHD+E+ EKE+ L+ HSE+LAVA
Sbjct: 490 FLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVA 549

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           +GL+   PG  + + KNLR+C DCHT  +FIS IV REI+VRD NR+HHF++G CSC  +
Sbjct: 550 YGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNF 609

Query: 771 W 771
           W
Sbjct: 610 W 610



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 202/411 (49%), Gaps = 35/411 (8%)

Query: 103 INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI 162
           + ACA      +G+K+H + IK G D     +N L++MY K G ++DA+ +F  + H D 
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +SW +++            L +F  M K   + P+ + +   +KACA +   + G+Q+H 
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF-------------------------- 255
           + I   +  D +V   LVDMYAKCG  D  R++F                          
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189

Query: 256 -----HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-DQTTLSTVLKSVA 309
                  MP KNL++W  +ISG +Q+G  +++  LF  M  +G+   D   LS+++ + A
Sbjct: 190 AIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASA 249

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           +   +G+ KQ+H L +   +ES  ++ N+L+D Y KC  V  A KIF      D+V+ TS
Sbjct: 250 NLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTS 309

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-F 428
           +I   AQ GL EEAL LY  M    + P+      L+ AC+++    +G+     +IK +
Sbjct: 310 IIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDY 369

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-VSWSAMIGGLAQH 478
           G          L+++ ++ G +++A+     +P +    +W+A++     H
Sbjct: 370 GINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHH 420



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 56/401 (13%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+AC   +   +G ++H  ++ TG D  + ++N+L+ MY KCG   D+  LF+ +P R  
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +SW S+ +     +     +  F  M    G++P+ +  + ++ ACA  G    G+++H 
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLE-------------------------------D 149
             I      D    ++LVDMYAK G  +                               D
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW--ALKLFQQMKSSEIN-PNMFTYTSALKA 206
           A+ +F+ +   +++SW A+I+G V  +  +W  +  LF +M+S  I+  + F  +S + A
Sbjct: 190 AIQLFQKMPVKNLLSWTALISGLV--QSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGA 247

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
            A + +  LG+Q+HC +I +  +S   V   LVDMYAKC  +  A+ IF  M ++++++W
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I G  Q+G   EA SL+  M   G+  ++ T   +         I  C  V  +S  
Sbjct: 308 TSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGL---------IYACSHVGLVSKG 358

Query: 327 TAFESD---DYIVNS-------LIDAYGKCGHVEDAVKIFK 357
             F +    DY +N        L+D   + GH+E+A  + K
Sbjct: 359 RYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIK 399



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 35/295 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KAC     +  G QVH   + +    D+ V +SLV MYAKCG     R +FD+I  ++
Sbjct: 111 LVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKN 170

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRP---------------- 94
            +SW ++ S Y       +A+  F++M          ++SG+                  
Sbjct: 171 SISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRS 230

Query: 95  ------NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
                 + F LSS+I A A      LG++IH   I LGY+S +F +NALVDMYAK  ++ 
Sbjct: 231 KGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVL 290

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F  +   DIVSW ++I G   H   + AL L+ +M S+ + PN  T+   + AC+
Sbjct: 291 AAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACS 350

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMPEK 261
            + L   GR    S+IK +   +P +     L+D+ ++ G ++EA  +   MP K
Sbjct: 351 HVGLVSKGRYFFNSMIK-DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFK 404



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 7/226 (3%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L LG Q+H +V+  G++S  FV+N+LV MYAKC + + ++++F  + +R +VSW S+   
Sbjct: 254 LGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVG 313

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK-LGYDS 129
                  EEA+  +  M+ +G++PNE +   +I AC+  G    GR      IK  G + 
Sbjct: 314 TAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINP 373

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            +     L+D+ ++ G+LE+A  + K +   PD  +W A+++ C  H +    +++   +
Sbjct: 374 SLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHL 433

Query: 189 KSSEI-NPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDP 232
            S +  +P+ +   S + A A M E     R+L   +  ME+K +P
Sbjct: 434 LSLKPEDPSTYILLSNIYASAAMWESVSKVRRL---MAAMEVKKEP 476


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/772 (34%), Positives = 425/772 (55%), Gaps = 8/772 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G Q+H  +   G++SD  V+ +L+ MY KCG+   +R++F+ + ER+
Sbjct: 158 ILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S YV     +EA   F++++ SG +PN+ S +S++ AC    D   G K+H 
Sbjct: 218 VVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHA 277

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G + ++   NAL+ MYA+ G+L +A  VF ++  P+ VSWNA+IAG       + 
Sbjct: 278 YIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAG-YGEGFMEE 336

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +LF+ M+     P+ FTY S L  CA       G++LH  +++   ++D  V   L+ 
Sbjct: 337 AFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALIS 396

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS++EAR +F+ MPEKN ++WN  I+   ++G + EA  +F  M R+ V  D  T
Sbjct: 397 MYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVT 456

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             T+L S  S +     + +H    +    S++ + N+LI  YG+CG + DA ++F    
Sbjct: 457 FITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIR 516

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL +  +MI AY Q G    A  L+++ +      D +   ++L A ANL   + G++
Sbjct: 517 RRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRK 576

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  + K G   D     +L+ MY+KCGS+ DA   F  + ++ +V W+AM+        
Sbjct: 577 IHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDH 636

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G++AL++F QM  +GV P+  T  SVL AC   G +   K  F +  K+  ++    HYA
Sbjct: 637 GQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGK-KFHTQLKEAAMETDTRHYA 695

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+  LGRA   +EA E ++ +  +++A +W +LL A RI+ NV + + A E L  ++ +
Sbjct: 696 CMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQ 755

Query: 601 KSSTHV-LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
            S      L NIYA+AG W++V+ ++  M++  L   P    IEV  + +TF     S  
Sbjct: 756 SSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLA-PKSCTIEVNSEFHTFMTNHFSPQ 814

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
              E   K++E+   +   G+  +++      +  EKE+L  H  E LAVA+GL  TPPG
Sbjct: 815 IGVE--DKIEELVWKMMDKGF--LLDPHYAPNDSREKERLFSHCPELLAVAYGLEHTPPG 870

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +R   +  +    H   +FISK  +R I VRD N FH+F++G CSCG YW
Sbjct: 871 VLVRCVTDSPVTDPSHRMLKFISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 195/641 (30%), Positives = 342/641 (53%), Gaps = 14/641 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+ C   K L  G +VH  +    F+ D ++ N L+ MY+KCG+  D+  +F ++ ++ V
Sbjct: 58  LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++ S Y      +EAV  F +M   G++PN+ S  S+++AC        G +IH +
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSH 177

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             K GY+SD+  + AL++MY K G+LE A  VF ++   ++VSW A+I+G V H  +  A
Sbjct: 178 ITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEA 237

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             LFQ++  S   PN  ++ S L AC      E G +LH  + +  ++ + +VG  L+ M
Sbjct: 238 FVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISM 297

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YA+CGS+  AR +F  +   N ++WN +I+G+ + G   EA  LF  M ++G   D+ T 
Sbjct: 298 YARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTY 356

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L   A    +   K++H+  V+TA+E+D  +  +LI  Y KCG +E+A K+F +   
Sbjct: 357 ASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPE 416

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            + V+  + I    + G  +EA +++ +M+  ++ PD     +LLN+C +   +E+G+ +
Sbjct: 417 KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYI 476

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  I ++G +S+    N+L++MY +CG + DA   F  I  R + SW+AMI    QHG  
Sbjct: 477 HGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGAN 536

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCA-CNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             A  +F +   +G   +  T ++VL A  N   L A  K H   + +K G++       
Sbjct: 537 GSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIH--GLVEKAGLEKDIRILT 594

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM-----LF 595
            +I +  + G  ++A  +   +  + +   W A+L A   Y + + GQ A ++     L 
Sbjct: 595 TLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLAA---YNHSDHGQDALKLFQQMRLE 650

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
            + P+ S+T+  + N  A  G  ++  K    +K+  ++ +
Sbjct: 651 GVNPD-SATYTSVLNACARLGAIEHGKKFHTQLKEAAMETD 690



 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 152/487 (31%), Positives = 274/487 (56%), Gaps = 3/487 (0%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G++ N    +  +  C  +     G+K+H +     ++ D++  N L+ MY+K G++EDA
Sbjct: 46  GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF+ +E  D+VSWNA+I+G  LH     A+ LF QM+   + PN  ++ S L AC   
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTP 165

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
            + E G Q+H  + K   +SD  V   L++MY KCGS++ AR +F+ M E+N+++W  +I
Sbjct: 166 IVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 225

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           SG++Q+G   EA  LF  + R G   ++ + +++L +  +   +    ++HA   +   E
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLE 285

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            +  + N+LI  Y +CG + +A ++F    + + V+  +MI  Y + G  EEA +L+ +M
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDM 344

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q +   PD F  +SLL  CA+ +   +GK++H  I++  + +D     +L++MYAKCGS+
Sbjct: 345 QQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSL 404

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           ++A + F+++P++  VSW+A I    +HG  KEA Q+F QM  D V+P+H+T +++L +C
Sbjct: 405 EEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSC 464

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
                    ++    ++ ++G+         +I + GR GK  +A E+   +  + +   
Sbjct: 465 TSPEDFERGRYIHGKID-QWGMLSNNLVANALISMYGRCGKLADAREVFYRIR-RRDLGS 522

Query: 571 WGALLGA 577
           W A++ A
Sbjct: 523 WNAMIAA 529



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 150/287 (52%), Gaps = 2/287 (0%)

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           + GV  +    +  L+     +++   K+VH       FE D Y+ N LI  Y KCG +E
Sbjct: 44  KRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIE 103

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           DA  +F+     D+V+  +MI+ YA  G G+EA+ L+ +MQ   + P+     S+L+AC 
Sbjct: 104 DANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQ 163

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
                E G+Q+H HI K G+ SD     +L+NMY KCGS++ A + F+E+ +R +VSW+A
Sbjct: 164 TPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTA 223

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G  QHG  KEA  +F +++  G  PN ++  S+L AC +   + E      +  K+ 
Sbjct: 224 MISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDL-EQGLKLHAYIKQA 282

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           G++        +I +  R G    A ++ D +    N   W A++  
Sbjct: 283 GLEQEVLVGNALISMYARCGSLANARQVFDNLR-SPNRVSWNAMIAG 328


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/684 (38%), Positives = 401/684 (58%), Gaps = 4/684 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL A  S   L  GL VH   +  G  S+ +V +SLV MYAKCG    ++++FD + E++
Sbjct: 333  VLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQN 392

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VV WN++   YV   +  E +  F  M   G  P++F+ SS+++ACA      LG ++H 
Sbjct: 393  VVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHS 452

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              IK  + S++F  NALVDMYAK G LEDA   F+ I + D VSWN +I G V  E    
Sbjct: 453  VIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVE 512

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A  LF++M    I P+  +  S L ACA +   E G+Q+HC  +K   ++    G  L+D
Sbjct: 513  AFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLID 572

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAKCG++D A  I   MPE+++++ N +I+G+ Q   + +A +LF  M  EG+   + T
Sbjct: 573  MYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEIT 631

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKE- 358
             +++L +    Q + + +Q+H+L +K   + DD ++  SL+  Y       DA  +F E 
Sbjct: 632  FASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEF 691

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S+    V  T+MI+  +Q      AL+LY EM+   + PD     S L ACA +S+ + G
Sbjct: 692  SNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDG 751

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
             + H  I   GF SD    ++LV+MYAKCG +  + + F E+   + ++SW++MI G A+
Sbjct: 752  TETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAK 811

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G  ++AL++F +M +  V P+ +T + VL AC+H+G V+E +  F+ M   +G+QP  +
Sbjct: 812  NGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRAD 871

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            H ACM+D+LGR G  +EA E ++ + F+ +A VW  +LGA RI+ +   GQ AAE L  +
Sbjct: 872  HCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIEL 931

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP+ SS +VLLSNIYA++G WD V  +RR M++  +KK PG SWI V  +   F  GD+S
Sbjct: 932  EPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKS 991

Query: 658  HARSKEIYAKLDEVSDLLNKAGYV 681
            H  + EI A L +++ L+ +  YV
Sbjct: 992  HHSASEIDAILKDLTPLMRENDYV 1015



 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 190/572 (33%), Positives = 310/572 (54%), Gaps = 13/572 (2%)

Query: 13  LGLQVHGIVVF-----TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSL 67
           +GL    + VF      G + D+    +++  Y   G   ++  LF  +P R+VV+WN +
Sbjct: 239 VGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLM 298

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY 127
            S +    +  EA+ FF+ M  +GI+    +L S+++A A       G  +H  ++K G 
Sbjct: 299 ISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGL 358

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
            S+++  ++LV MYAK G +E A  VF  +   ++V WNA++ G V + + +  ++LF  
Sbjct: 359 HSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFN 418

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           MKS    P+ FTY+S L ACA ++  +LG QLH  +IK +  S+  VG  LVDMYAK G+
Sbjct: 419 MKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGA 478

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +++AR  F L+  ++ ++WN++I G++Q   ++EA  LF  M   G+  D+ +L+++L +
Sbjct: 479 LEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSA 538

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            AS + +   KQVH LSVKT  E+  Y  +SLID Y KCG ++ A KI        +V+ 
Sbjct: 539 CASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSM 598

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            ++I  YAQ  L E+A+ L+ +M    IN      +SLL+AC        G+Q+H  I+K
Sbjct: 599 NALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILK 657

Query: 428 FGF-MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEAL 485
            G  + D F G SL+ MY       DA   FSE  + +  V W+AMI GL+Q+     AL
Sbjct: 658 MGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVAL 717

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF--GIQPMQEHYACMI 543
           Q++ +M    VLP+  T VS L AC    +V+  K   E+    F  G    +   + ++
Sbjct: 718 QLYKEMRSCNVLPDQATFVSALRAC---AVVSSIKDGTETHSLIFHTGFDSDELTSSALV 774

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           D+  + G  + +M++   M  + +   W +++
Sbjct: 775 DMYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 173/564 (30%), Positives = 290/564 (51%), Gaps = 36/564 (6%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H   +  GF S   + N +V +YAKC +   + R F  + ++ +++WNS+ S +    F
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
               V +F  +  SG+ PNEF+ + ++++CA       GR++H   +K+G++S  +   A
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ MYAK   L DA ++F      D VSW ++I G +     + A+K+FQ+M+     P 
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP- 259

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
                                             D +  V +++ Y   G +D A  +F 
Sbjct: 260 ----------------------------------DQVAFVTVINAYVDLGRLDNASDLFS 285

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP +N++AWN++ISGH + G  +EA   F  M + G+   ++TL +VL ++AS  A+  
Sbjct: 286 RMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDF 345

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
              VHA ++K    S+ Y+ +SL+  Y KCG +E A K+F   +  ++V   +M+  Y Q
Sbjct: 346 GLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQ 405

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G   E ++L+  M+     PD F  SS+L+ACA L   + G Q+H  IIK  F S+ F 
Sbjct: 406 NGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFV 465

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           GN+LV+MYAK G+++DA + F  I +R  VSW+ +I G  Q     EA  +F +M   G+
Sbjct: 466 GNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGI 525

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           LP+ ++L S+L AC     + + K     +  K G +      + +ID+  + G    A 
Sbjct: 526 LPDEVSLASILSACASVRGLEQGK-QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584

Query: 557 ELVDTMPFQANASVWGALLGAARI 580
           +++  MP ++  S+   + G A+I
Sbjct: 585 KILACMPERSVVSMNALIAGYAQI 608



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 182/578 (31%), Positives = 290/578 (50%), Gaps = 42/578 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C   + +  G QVH  VV  GF+S  +   +L+ MYAKC    D+R +FD   E  
Sbjct: 166 VLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELD 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW S+   Y+     EEAV  F+EM   G  P++ +  ++INA               
Sbjct: 226 KVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA--------------- 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y  +G L++A  +F  + + ++V+WN +I+G     +   
Sbjct: 271 --------------------YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVE 310

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ FQ M+ + I     T  S L A A +   + G  +H   +K  + S+  VG  LV 
Sbjct: 311 AIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG M+ A+ +F  + E+N++ WN ++ G++QNG   E   LF  M   G   D  T
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFT 430

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S++L + A  + + +  Q+H++ +K  F S+ ++ N+L+D Y K G +EDA + F+   
Sbjct: 431 YSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIR 490

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+   +I  Y Q     EA  L+  M    I PD    +S+L+ACA++   EQGKQ
Sbjct: 491 NRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQ 550

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K G  +  ++G+SL++MYAKCG+ID A +  + +P+R +VS +A+I G AQ   
Sbjct: 551 VHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL 610

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            ++A+ +F  ML +G+    IT  S+L AC H            S+  K G+Q   E   
Sbjct: 611 -EQAVNLFRDMLVEGINSTEITFASLLDAC-HEQQKLNLGRQIHSLILKMGLQLDDEFLG 668

Query: 541 CMIDILG---RAGKFQEAMELVDTMPFQANASVWGALL 575
             + +LG    + +  +A  L        +A VW A++
Sbjct: 669 --VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMI 704



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 248/509 (48%), Gaps = 41/509 (8%)

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           S   + IH  S+KLG+ S     N +VD+YAK  +++ A   FK +E  DI++WN++++ 
Sbjct: 75  STTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSM 134

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                     +K F  + +S + PN FT+   L +CA +E+ + GRQ+HC+++KM  +S 
Sbjct: 135 HSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESI 194

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
                 L+ MYAKC  + +AR IF    E + ++W  +I G+++ G   EA  +F  M +
Sbjct: 195 SYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEK 254

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            G   DQ    TV                                   I+AY   G +++
Sbjct: 255 VGQEPDQVAFVTV-----------------------------------INAYVDLGRLDN 279

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A  +F      ++VA   MI+ +A+ G G EA++ +  M+   I        S+L+A A+
Sbjct: 280 ASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L+A + G  VH   +K G  S+ + G+SLV+MYAKCG ++ A + F  + ++ +V W+AM
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAM 399

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES--MEKK 529
           +GG  Q+G   E +++F  M   G  P+  T  S+L AC     + +  H   S  ++ K
Sbjct: 400 LGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYL-DLGHQLHSVIIKNK 458

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
           F       +   ++D+  ++G  ++A +  + +  + N S    ++G  +    VE    
Sbjct: 459 FASNLFVGN--ALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516

Query: 590 AAEM-LFAIEPEKSSTHVLLSNIYASAGM 617
              M L  I P++ S   +LS   +  G+
Sbjct: 517 FRRMNLLGILPDEVSLASILSACASVRGL 545



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           K +HA S+K  F S   + N ++D Y KC  V+ A + FK+    D++A  S+++ +++ 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G     +K +  + +  + P+ F  + +L++CA L   + G+QVH +++K GF S ++  
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            +L+ MYAKC  + DA   F    +   VSW++MIGG  + G  +EA+++F +M + G  
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+ +  V+V+ A    G +  A   F  M  +  +      +  MI    + G   EA+E
Sbjct: 259 PDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVA-----WNLMISGHAKGGYGVEAIE 313

Query: 558 LVDTMP---FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
               M     ++  S  G++L A      ++ G     +L   E  K   H   SN+Y  
Sbjct: 314 FFQNMRKAGIKSTRSTLGSVLSAIASLAALDFG-----LLVHAEALKQGLH---SNVYVG 365

Query: 615 AGMWDNVAK 623
           + +    AK
Sbjct: 366 SSLVSMYAK 374


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/648 (37%), Positives = 374/648 (57%), Gaps = 7/648 (1%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++   N+L+++Y K   L  A  +F ++    +VS+N ++ G +    +   +KLF+ M 
Sbjct: 54  NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
           SS   PN + +T+ L ACA       G Q H  L K  +     V   LV MY+KC  +D
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173

Query: 250 EARMIF-----HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            A  +      ++  + +   +N V++  +++G   EA  +   M  EGV +D  T  +V
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           +      + +G+  QVHA  +K     D ++ + L+D +GKCG V  A K+F      ++
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHV 423
           V  TS++TAY Q G  EE L L L   DRE    + F  + LLNA A ++A   G  +H 
Sbjct: 294 VVWTSLMTAYLQNGEFEETLNL-LSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHA 352

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
            + K G  +    GN+L+NMY+KCG ID +   F ++ +R I++W+AMI G +QHG GK+
Sbjct: 353 RVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQ 412

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL +F  ML  G  PNH+T V VL AC H  LV E  ++   + K F ++P  EHY C++
Sbjct: 413 ALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVV 472

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSS 603
            +L RAG  +EA   + T   + +   W  LL A  I++N  +G   AE +  ++P    
Sbjct: 473 AVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMG 532

Query: 604 THVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKE 663
           T+ LLSN+YA A  WD+V  +R+ M++  +KKEPG+SWIE+++ V+ F+    +H    +
Sbjct: 533 TYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQ 592

Query: 664 IYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIR 723
           IY K+  + +++ + GYVP +E  LHDVE+ +KE  L +HSEKLA+A+GL+  P  A IR
Sbjct: 593 IYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIR 652

Query: 724 VKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           V KNLRIC DCHT+ + ISK+ +R IIVRD +RFHHFR+G+C+C  +W
Sbjct: 653 VIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 205/391 (52%), Gaps = 7/391 (1%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           NSL+ +Y KC     +R LFD +  RSVVS+N L   Y+H     E V  FK MV S  +
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           PNE+  +++++ACA SG    G + HG+  K G     F  ++LV MY+K  +++ A+ V
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178

Query: 154 FKDIEHPDI------VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
            +  EH +I        +N+V+   V       A+++  +M    +  +  TY S +  C
Sbjct: 179 LES-EHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLC 237

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
             +    LG Q+H  L+K  +  D  VG  LVDM+ KCG +  AR +F  +  +N++ W 
Sbjct: 238 GQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWT 297

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +++ +LQNG   E  +L   M REG   ++ T + +L + A   A+     +HA   K 
Sbjct: 298 SLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKL 357

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             ++   + N+LI+ Y KCG ++ +  +F +    D++   +MI  Y+Q GLG++AL L+
Sbjct: 358 GIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLF 417

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +M      P+      +L+ACA+L+   +G
Sbjct: 418 QDMLSAGECPNHVTFVGVLSACAHLALVNEG 448



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 207/478 (43%), Gaps = 44/478 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA----- 55
           VL AC     +F G+Q HG +   G     FV +SLV MY+KC +   + ++ ++     
Sbjct: 127 VLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNI 186

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
             +     +NS+ +  V    L EAV     MV  G+  +  +  S++  C    D  LG
Sbjct: 187 DNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLG 246

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            ++H   +K G   D+F  + LVDM+ K G++  A  VF  +++ ++V W +++   + +
Sbjct: 247 LQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQN 306

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
              +  L L   M       N FT+   L A AGM     G  LH  + K+ IK+  IVG
Sbjct: 307 GEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVG 366

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L++MY+KCG +D +  +F  M  +++I WN +I G+ Q+G   +A  LF  M   G  
Sbjct: 367 NALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGEC 426

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +  T   VL + A           H   V   F    Y +N L+             K 
Sbjct: 427 PNHVTFVGVLSACA-----------HLALVNEGF----YYLNQLM-------------KH 458

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           FK    ++   C   +   A  G+ EEA      M+  ++  D      LLNAC     Y
Sbjct: 459 FKVEPGLEHYTCVVAVLCRA--GMLEEAENF---MRTTQVKWDVVAWRVLLNACNIHRNY 513

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW 468
             G ++   I++     D      L NMYAK  S D        + +R +     VSW
Sbjct: 514 NLGTKIAETILQMD-PRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSW 570


>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/769 (36%), Positives = 417/769 (54%), Gaps = 50/769 (6%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-RSVVSWNSLFSCYVHC 74
           Q+H  VV  G   +  +   L+  Y  C N   +R +FD  P     + WN +   Y   
Sbjct: 73  QIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKT 132

Query: 75  DFLEEAVCFFKEMVLSGIRP---NEFSLSSMINACAGSGD-SLLGRKIHGYSIKLGYDSD 130
              +E++  F +M+  G RP   ++++ + +  AC+        G  +HG  +K GY+SD
Sbjct: 133 PSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESD 191

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH-EHNDWALKLFQQMK 189
           +F  N+LV+MY+    + DA  VF ++   D+++W +V+ G  +  E  + AL+ F  M 
Sbjct: 192 IFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFNDML 251

Query: 190 S-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
              E+ PN     S L ACA +   + G+ +H  + K  I     +   L+DMYAKCG +
Sbjct: 252 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 311

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           D AR +F  + +++L+ W  +ISG   +G   E    F  M  EG   D  TL  VL   
Sbjct: 312 DCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNG- 370

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
            S   +   + VH + VK+ FES+ Y+ NS+I+       +EDA K+F + S  D+ + T
Sbjct: 371 CSHSGLVEEEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWT 430

Query: 369 SMITAYAQFG-LGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           S++  YA+ G +   +L  +  M  D  +NP+  V   +L+ACA+L A +QG  +H++I 
Sbjct: 431 SLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYID 490

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G    +    +L++MYAKCG ID A R F+ I  R ++S+++MI GL+ HG GK+AL+
Sbjct: 491 KIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALR 550

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
                    +L N                          ME  +GI P  EHY C ID+L
Sbjct: 551 ------GSSILAN--------------------------MESLWGIAPKIEHYGCYIDLL 578

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH- 605
           GRAG  + A+E+V TMP + +  +W ALL A+RI+ NV +G+   +++  I   KSS H 
Sbjct: 579 GRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGE---QIISHIGQLKSSDHN 635

Query: 606 ---VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
              VLLSN+YAS G W+ V ++R+ M D + +  PG SWIEV   V+ F V D+ H +  
Sbjct: 636 GGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEFRVADQLHPQIV 695

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           EI  KL+E+   L++ GY         D+ E EKEQ +  HSEKLA+AFGL++T PG  I
Sbjct: 696 EIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAWHSEKLAIAFGLMSTEPGTLI 755

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+ KNLR C DCH++ + IS++  REI+VRD +RFH F  G CSC  +W
Sbjct: 756 RIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIEGDCSCKDFW 804



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 211/394 (53%), Gaps = 14/394 (3%)

Query: 1   VLKACTSKKDLF-LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V  AC+    L   G  VHG+VV  G++SD FV NSLV MY+     +D++R+FD +P+R
Sbjct: 162 VFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQR 221

Query: 60  SVVSWNSLFSCY-VHCDFLEEAV-CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            V++W S+   Y +  +F  EA+ CF   +    ++PNE  L S+++ACA  G    G+ 
Sbjct: 222 DVITWTSVVKGYAMRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKW 281

Query: 118 IHGYSIKLGYDSDMFSAN---ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           IH Y  K   +  + S+N   AL+DMYAK G ++ A  VF  +   D+++W ++I+G  +
Sbjct: 282 IHVYIDK---NRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSM 338

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           H      L  F +M +    P+  T    L  C+   L E    +H  ++K   +S+  V
Sbjct: 339 HGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVE-EEIVHGMVVKSGFESNLYV 397

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW---MYR 291
           G  +++M +    M++AR +F+ M E+++ +W  ++ G+ ++ G+M+ ASL  +   +  
Sbjct: 398 GNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKH-GEMDRASLTFFCNMLCD 456

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
           + V  ++  L  VL + A   A+     +H    K        I  +LID Y KCG ++ 
Sbjct: 457 DRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDC 516

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           A ++F      D+++ TSMI+  +  GLG++AL+
Sbjct: 517 ASRVFNGICKRDVLSFTSMISGLSYHGLGKDALR 550



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 133/273 (48%), Gaps = 14/273 (5%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            +T   +LK   S   I   KQ+HA  V      +  ++  LI +Y  C ++  A  +F 
Sbjct: 55  HSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFD 111

Query: 358 E-SSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACA---N 411
           +  S    +    MI AY++    +E+L L+ +M    R  + D +  + +  AC+    
Sbjct: 112 QFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPT 171

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
           L  Y  G+ VH  ++K G+ SD F GNSLVNMY+    + DA R F E+P R +++W+++
Sbjct: 172 LRGY--GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSV 229

Query: 472 IGGLAQHGR-GKEALQMFGQML-EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           + G A  G    EALQ F  ML  D V PN   LVS+L AC H G + + K     ++K 
Sbjct: 230 VKGYAMRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKN 289

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
             I         +ID+  + G+   A  + D +
Sbjct: 290 -RILLSSNISTALIDMYAKCGRIDCARRVFDGL 321


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/661 (36%), Positives = 370/661 (55%), Gaps = 36/661 (5%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSAL 204
           L +A  VF       + +W ++I+GC     +   ++ F +M  +     PN F     L
Sbjct: 74  LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
           + CAG+   E GR++H  +++  +  D ++   ++DMYAKCG    AR  F  M +K+  
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193

Query: 265 AWNIVISGHLQNGGDMEAASLF---------PW----------------------MYREG 293
           +WNIVI   LQ+G  + A  LF          W                      M R G
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAG 253

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V F   T S V        +  + +Q+H   V    E D ++  SL+D Y KCG +E A+
Sbjct: 254 VTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESAL 313

Query: 354 KIFKESSAVD---LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            IF   S        A ++M+  Y Q G  EEAL+ +  M    +    F+ +S+ +ACA
Sbjct: 314 SIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACA 373

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           N    EQG+QVH  + K G   D    +++V+MY+K GS++DA R F     + +  W+ 
Sbjct: 374 NAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTT 433

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           M+   A HG+G+ AL++F +M  + ++PN ITLV+VL AC+H+GLV++  H+F  M++++
Sbjct: 434 MLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEY 493

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           GI P  EHY CM+D+ GRAG   +A   ++       A VW  LL A R++K++E  Q A
Sbjct: 494 GIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLA 553

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           +E L  +E   + ++VL+SN+YA+   W +  K+R  MK+ +++K+PG SWI +K+ V+ 
Sbjct: 554 SEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHR 613

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           F   D SH RS EIYA L+++ + L + GY    +  +HD+EE ++E  L  HSEKLA+A
Sbjct: 614 FVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIA 673

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FG+I+TP G  +R+ KNLR+C DCH + +FI++   REI+VRD+ RFHHF++G CSC  +
Sbjct: 674 FGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDF 733

Query: 771 W 771
           W
Sbjct: 734 W 734



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 229/470 (48%), Gaps = 40/470 (8%)

Query: 48  DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINA 105
           ++ R+FD  P RS+ +W S+ S         + +  F EM+       PN F L+ ++  
Sbjct: 76  NAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRC 135

Query: 106 CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN------------------- 146
           CAG GD   GR+IHG+ ++ G   D+   NA++DMYAK G+                   
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195

Query: 147 -------LED-----AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
                  L+D     A  +F +    D+ SWN +++G + H H   AL   QQM  + + 
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
            + +TY+        +  ++LGRQLH  ++   ++ D  VG  L+DMY KCG M+ A  I
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 255 FHL---MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           F       E    AW+ +++G++QNG + EA   F  M REGV   Q  L++V  + A+ 
Sbjct: 316 FDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANA 375

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
             +   +QVH    K     D  + ++++D Y K G +EDA +IF+ +   ++   T+M+
Sbjct: 376 GMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTML 435

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGF 430
            +YA  G G  AL+++  M+  +I P+     ++L+AC++      G    ++   ++G 
Sbjct: 436 CSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGI 495

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSE--IPDRGIVSWSAMIGGLAQH 478
           + +T   N +V++Y + G +D A     E  I    +V W  ++     H
Sbjct: 496 VPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVV-WKTLLSACRLH 544



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 189/401 (47%), Gaps = 49/401 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-- 58
           VL+ C    D+  G ++HG ++ +G   D  + N+++ MYAKCG+   +RR F A+ +  
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKD 191

Query: 59  -----------------------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                        R V SWN++ S  +      EA+   ++MV 
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR 251

Query: 90  SGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           +G+  + ++ S M+ A AG   S  LGR++HG  +    + D F   +L+DMY K G +E
Sbjct: 252 AGVTFSNYTYS-MVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEME 310

Query: 149 DAVAVF---KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            A+++F    D       +W+ ++AG V +   + AL+ F++M    +    F  TS   
Sbjct: 311 SALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVAS 370

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           ACA   + E GRQ+H  + K+  + D  +   +VDMY+K GS+++A  IF     KN+  
Sbjct: 371 ACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVAL 430

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA-------SFQAIGVCK 318
           W  ++  +  +G    A  +F  M  E +  ++ TL  VL + +        +    + +
Sbjct: 431 WTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQ 490

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           + + +   T    + Y  N ++D YG+ G ++ A    +E+
Sbjct: 491 EEYGIVPNT----EHY--NCMVDLYGRAGLLDKAKNFIEEN 525



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 12/274 (4%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA---IPE 58
           L    S +DL  G Q+HG VV    + D FV  SL+ MY KCG    +  +FD      E
Sbjct: 267 LAGLLSSRDL--GRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTE 324

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
               +W+++ + YV     EEA+ FF+ M+  G+   +F L+S+ +ACA +G    GR++
Sbjct: 325 DRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQV 384

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+  KLG+  D   A+A+VDMY+K G+LEDA  +F+  +  ++  W  ++     H   
Sbjct: 385 HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQG 444

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--V 236
             AL++F +MK+ +I PN  T  + L AC+   L   G   + +L++ E    P      
Sbjct: 445 RMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYH-YFNLMQEEYGIVPNTEHYN 503

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
            +VD+Y + G +D+A+       E+N I+   V+
Sbjct: 504 CMVDLYGRAGLLDKAKNFI----EENKISHEAVV 533



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 53/285 (18%)

Query: 315 GVC---KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
           G C   K +H  SV+    S   I   L +A+          ++F  +    L A TS+I
Sbjct: 47  GACAAKKAIHRQSVRGCVPSSSVIARGLHNAH----------RVFDGTPTRSLPAWTSII 96

Query: 372 TAYAQFGLGEEALKLYLEMQDR--EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +  A+ G   + ++ + EM D      P++FV + +L  CA L   E G+++H  I++ G
Sbjct: 97  SGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSG 156

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD--------------------------- 462
              D    N++++MYAKCG    A RAF  +                             
Sbjct: 157 VCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFD 216

Query: 463 ----RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
               R + SW+ ++ GL +HG   EAL    QM+  GV  ++ T   V      AGL++ 
Sbjct: 217 ESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFAL---AGLLS- 272

Query: 519 AKHHFESMEKKFGIQPMQEH--YAC-MIDILGRAGKFQEAMELVD 560
           ++     +  +  +  ++E     C ++D+  + G+ + A+ + D
Sbjct: 273 SRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFD 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  AC +   +  G QVHG V   G   D  +A+++V MY+K G+  D+ R+F +   ++
Sbjct: 368 VASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKN 427

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  W ++   Y        A+  F  M    I PNE +L ++++AC+ SG  L+    H 
Sbjct: 428 VALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSG--LVSDGYHY 485

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHPDIVSWNAVIAGCVLH 175
           +++   + G   +    N +VD+Y + G L+ A    ++  I H  +V W  +++ C LH
Sbjct: 486 FNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVV-WKTLLSACRLH 544

Query: 176 EHNDWA 181
           +H ++A
Sbjct: 545 KHIEYA 550



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 24/199 (12%)

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           ++P +F+  S         A    K +H   ++    S +     L N          A 
Sbjct: 29  LSPQTFIFHSSARLLPEAGACAAKKAIHRQSVRGCVPSSSVIARGLHN----------AH 78

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED--GVLPNHITLVSVLCACNH 512
           R F   P R + +W+++I G A+ GR  + ++ F +ML++     PN   L  VL  C  
Sbjct: 79  RVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAG 138

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW- 571
            G V E+         + G+ P       ++D+  + G    A      M  Q +A+ W 
Sbjct: 139 LGDV-ESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMA-QKDATSWN 196

Query: 572 ---------GALLGAARIY 581
                    G L+GA +++
Sbjct: 197 IVIRACLQDGDLVGATQLF 215


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/691 (35%), Positives = 400/691 (57%), Gaps = 9/691 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS-------DEFVANSLVVMYAKCGNFIDSRRLF 53
           ++ AC+  + L  G +VH  +V +   S       +  + N L+ MY +C     +R++F
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
           D +P R+ VSW S+ + +V      +A+  F  M+ SG   ++F+L S + AC   GD  
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            GR++H +++K    SD+   NALV MY+K G ++D   +F+ I+  D++SW ++IAG  
Sbjct: 170 TGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 229

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                  AL++F++M      +PN F + SA +AC  +   E G Q+H   IK  +  D 
Sbjct: 230 QQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 289

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  L DMYA+  ++D AR+ F+ +   +L++WN +++ +   G   EA  LF  M   
Sbjct: 290 YVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 349

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  T+  +L +     A+   + +H+  VK   + D  + NSL+  Y +C  +  A
Sbjct: 350 GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSA 409

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           + +F E    D+V   S++TA AQ    EE LKL+  +   E + D    +++L+A A L
Sbjct: 410 MDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 469

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAM 471
             +E  KQVH +  K G + D    N+L++ YAKCGS+DDA R F  +  +R + SWS++
Sbjct: 470 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 529

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G AQ G  KEAL +F +M   G+ PNH+T + VL AC+  G V E  +++  ME ++G
Sbjct: 530 IVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 589

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P +EH +C++D+L RAGK  EA   +D MPF+ +  +W  LL A++++ ++E+G+ AA
Sbjct: 590 IVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAA 649

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           E +  I+P  S+ +VLL NIYA++G W+  A++++ M+ + +KK PG SW+++K ++  F
Sbjct: 650 EGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVF 709

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            V DRSH  S+EIYA L+ +   + KAGYVP
Sbjct: 710 IVEDRSHPESEEIYAMLELIGMEMIKAGYVP 740



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 222/442 (50%), Gaps = 21/442 (4%)

Query: 200 YTSALKACAGMELKELGRQLHCSLI-------KMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           Y + + AC+ +     GR++H  L+         ++  + ++G  L+ MY +C + D AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP +N ++W  VI+ H+QNG   +A  LF  M R G   DQ  L + +++     
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +G  +QVHA ++K+   SD  + N+L+  Y K G V+D   +F+     DL++  S+I 
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 373 AYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            +AQ G   EAL+++ +M  +   +P+ F   S   AC  + ++E G+Q+H   IK+   
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D + G SL +MYA+  ++D A  AF  I    +VSW++++   +  G   EAL +F +M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHH---FESMEKKFGIQPMQEHYACMIDILGR 548
            + G+ P+ IT+  +LCAC    +  +A +H     S   K G+         ++ +  R
Sbjct: 347 RDSGLRPDGITVRGLLCAC----VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYAR 402

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
                 AM++   +  Q +   W ++L A   + + E       +L   EP  S   + L
Sbjct: 403 CSDLSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SLDRISL 459

Query: 609 SNIYASA---GMWDNVAKVRRF 627
           +N+ +++   G ++ V +V  +
Sbjct: 460 NNVLSASAELGYFEMVKQVHAY 481


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/686 (35%), Positives = 388/686 (56%), Gaps = 46/686 (6%)

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-------EH 159
           A  GD   GR++     K     +++  N +V  YAK+G+ ++++ +FK +       + 
Sbjct: 145 ATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 160 P-------------DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           P             D++SWN++I+G V +   +  L +++QM    I+ ++ T  S L  
Sbjct: 201 PESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA      LG+ +H   IK   +        L+DMY+KCG +D A  +F  M E+N+++W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +I+G+ ++G    A  L   M +EGV  D   ++++L + A   ++   K VH     
Sbjct: 321 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
               S+ ++ N+L+D Y KCG +E A  +F      D+++  +M+               
Sbjct: 381 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-------------- 426

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
                  E+ PDS   + +L ACA+LSA E+GK++H +I++ G+ SD    N+LV++Y K
Sbjct: 427 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG +  A   F  IP + +VSW+ MI G   HG G EA+  F +M + G+ P+ ++ +S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+H+GL+ +    F  M+  F I+P  EHYACM+D+L R G   +A + ++T+P   
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 599

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
           +A++WGALL   RIY ++E+ +  AE +F +EPE +  +VLL+NIYA A   + V ++R 
Sbjct: 600 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMRE 659

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDR-SHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
            +    L+K PG SWIE+K +V  F  G+  SH  SK+I + L ++   + + GY P  +
Sbjct: 660 KIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 719

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             L + +E +KE  L  HSEKLA+AFGL+  PP  TIRV KNLR+C DCH   +F+SK  
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI++RD NRFHHF++G CSC G+W
Sbjct: 780 RREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 288/609 (47%), Gaps = 86/609 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K L  G +VH I+       DE +   LV  YA CG+  + RR+FD + +++
Sbjct: 105 VLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI---RPNE-------------FSLSSMIN 104
           V  WN + S Y      +E++C FK MV  GI   RP                S +SMI+
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224

Query: 105 A-----------------------------------CAGSGDSLLGRKIHGYSIKLGYDS 129
                                               CA SG   LG+ +H  +IK  ++ 
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            +  +N L+DMY+K G+L+ A+ VF+ +   ++VSW ++IAG      +D A+ L QQM+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 344

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +  ++   TS L ACA     + G+ +H  +    + S+  V   L+DMYAKCGSM+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F  M  K++I+WN ++       G+++               D  T++ +L + A
Sbjct: 405 GANSVFSTMVVKDIISWNTMV-------GELKP--------------DSRTMACILPACA 443

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  A+   K++H   ++  + SD ++ N+L+D Y KCG +  A  +F    + DLV+ T 
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI  Y   G G EA+  + EM+D  I PD     S+L AC++    EQG +   +I+K  
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIMKND 562

Query: 430 FMSDTFAGN--SLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEA 484
           F  +    +   +V++ ++ G++  A +    +   PD  I  W A++ G   +   + A
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI--WGALLCGCRIYHDIELA 620

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-MI 543
            ++  ++ E   L    T   VL A  +A   AE +   + M +K G + ++++  C  I
Sbjct: 621 EKVAERVFE---LEPENTGYYVLLANIYAE--AEKREEVKRMREKIGKKGLRKNPGCSWI 675

Query: 544 DILGRAGKF 552
           +I GR   F
Sbjct: 676 EIKGRVNLF 684


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/774 (34%), Positives = 414/774 (53%), Gaps = 96/774 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V KAC+  K+  +G  V+  ++  GF+ +  V  S++ M+ KCG    +RR F+ I  + 
Sbjct: 196 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  WN + S Y      ++A+    +M LSG++P                          
Sbjct: 256 VFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP-------------------------- 289

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF------KDIEHPDIVSWNAVIAGCVL 174
                    D  + NA++  YA+ G  E+A   F      KD + P++VSW A+IAG   
Sbjct: 290 ---------DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK-PNVVSWTALIAGSEQ 339

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
           + ++  AL +F++M    + PN  T  SA+ AC  + L   GR++H   IK+E + SD +
Sbjct: 340 NGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 399

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  LVD YAKC S++ AR  F ++ + +L++WN +++G+   G   EA  L   M  +G
Sbjct: 400 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG 459

Query: 294 V------------GFDQ-----------------------TTLSTVLKSVASFQAIGVCK 318
           +            GF Q                       TT+S  L +    + + + K
Sbjct: 460 IEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK 519

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H   ++   E    + ++LI  Y  C  +E A  +F E S  D+V   S+I+A AQ G
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
               AL L  EM    +  ++    S L AC+ L+A  QGK++H  II+ G  +  F  N
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           SL++MY +CGSI  + R F  +P R +VSW+ MI     HG G +A+ +F      G+ P
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKP 699

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           NHIT  ++L AC+H+GL+ E   +F+ M+ ++ + P  E YACM+D+L RAG+F E +E 
Sbjct: 700 NHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           ++ MPF+ NA+VWG+LLGA RI+ N ++ ++AA  LF +EP+ S  +VL++NIY++AG W
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 819

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
           ++ AK+R  MK+  + K PG SWIEVK K+++F VGD SH   ++I  K  ++       
Sbjct: 820 EDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL------- 872

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
                      DV+E EKE  L  HSEK+A+AFGLI+T  G  +R+ KNLR+ V
Sbjct: 873 -----------DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRVSV 915



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 286/618 (46%), Gaps = 82/618 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C    +L LG QVH  +V  G D  EF+ + L+ +Y + G   D+RR+FD + ER+
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW ++   Y      EE +  F  MV  G+RP+ F    +  AC+   +  +G+ ++ 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y + +G++ +     +++DM+ K G ++ A   F++IE  D+  WN +++G         
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALK    MK S + P+  T+ +                                   ++ 
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNA-----------------------------------IIS 299

Query: 241 MYAKCGSMDEARMIFHLMP-----EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
            YA+ G  +EA   F  M      + N+++W  +I+G  QNG D EA S+F  M  EGV 
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVK 354
            +  T+++ + +  +   +   +++H   +K    +SD  + NSL+D Y KC  VE A +
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 355 IFKESSAVDLVACTSMITAYA-----------------------------------QFGL 379
            F      DLV+  +M+  YA                                   Q+G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G+ AL+ +  M    ++P++   S  L AC  +   + GK++H ++++      T  G++
Sbjct: 480 GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSA 539

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+ C S++ A   FSE+  R +V W+++I   AQ GR   AL +  +M    V  N
Sbjct: 540 LISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVN 599

Query: 500 HITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            +T+VS L AC+    + + K  H F     + G+         +ID+ GR G  Q++  
Sbjct: 600 TVTMVSALPACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKSRR 656

Query: 558 LVDTMPFQANASVWGALL 575
           + D MP Q +   W  ++
Sbjct: 657 IFDLMP-QRDLVSWNVMI 673



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 211/442 (47%), Gaps = 44/442 (9%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           +S++  C    +  LG ++H   +  G D   F  + L+++Y + G +EDA  +F  +  
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 160 PDIVSWNAVIAG-CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            ++ SW A++   C L ++ +  +KLF  M +  + P+ F +    KAC+ ++   +G+ 
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEE-TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           ++  ++ +  + +  V   ++DM+ KCG MD AR  F  +  K++  WNI++SG+   G 
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             +A      M   GV  DQ T                                    N+
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW-----------------------------------NA 296

Query: 339 LIDAYGKCGHVEDAVKIFKESSAV-----DLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           +I  Y + G  E+A K F E   +     ++V+ T++I    Q G   EAL ++ +M   
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNMYAKCGSIDD 452
            + P+S   +S ++AC NLS    G+++H + IK   + SD   GNSLV+ YAKC S++ 
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A R F  I    +VSW+AM+ G A  G  +EA+++  +M   G+ P+ IT   ++     
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476

Query: 513 AGLVAEAKHHFESMEKKFGIQP 534
            G    A   F+ M    G+ P
Sbjct: 477 YGDGKAALEFFQRMH-SMGMDP 497



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 149/310 (48%), Gaps = 1/310 (0%)

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L+       + +  QVHA  V    +  +++ + L++ Y + G VEDA ++F + S 
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++ + T+++  Y   G  EE +KL+  M +  + PD FV   +  AC+ L  Y  GK V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           + +++  GF  ++    S+++M+ KCG +D A R F EI  + +  W+ M+ G    G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           K+AL+    M   GV P+ +T  +++     +G   EA  +F  M      +P    +  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML-FAIEPE 600
           +I    + G   EA+ +   M  +        +  A     N+ + +H  E+  + I+ E
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 601 KSSTHVLLSN 610
           +  + +L+ N
Sbjct: 393 ELDSDLLVGN 402



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 117/250 (46%), Gaps = 7/250 (2%)

Query: 396 NPDSFV--CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           NPD  +   +S+L  C  L     G QVH  ++  G     F G+ L+ +Y + G ++DA
Sbjct: 84  NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            R F ++ +R + SW+A++      G  +E +++F  M+ +GV P+H     V  AC+  
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
                 K  ++ M    G +        ++D+  + G+   A    + + F+ +  +W  
Sbjct: 204 KNYRVGKDVYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNI 261

Query: 574 LL-GAARIYKNVEVGQHAAEM-LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           ++ G     +  +  +  ++M L  ++P++ + + ++S  YA +G ++  +K    M   
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEMGGL 320

Query: 632 KLKKEPGMSW 641
           K  K   +SW
Sbjct: 321 KDFKPNVVSW 330


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/674 (36%), Positives = 387/674 (57%), Gaps = 5/674 (0%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGY---DSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           ++   A + +   GR IH +     +   DS +   N+L+++Y K   +  A  +F  + 
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGR 217
             ++VSW+A++AG + + +     +LF++M   + I PN +   +A+ +C      E G+
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GK 143

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q H   +K  ++    V   L+ +Y+KC  +  A  I + +P  ++  +N+V++G LQ+ 
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA  +   +  EG+ ++  T  T+ +  AS + I + KQVHA  +K+  + D YI +
Sbjct: 204 HMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGS 263

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           S+ID YGKCG+V      F    + ++V+ TS+I AY Q    EEAL L+ +M+   I P
Sbjct: 264 SIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPP 323

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           + +  + L N+ A LSA   G Q+H    K G   +   GN+L+ MY K G I  A   F
Sbjct: 324 NEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVF 383

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           S +    I++W+A+I G + HG GKEAL MF  M+  G  PN++T + V+ AC H  LV 
Sbjct: 384 SNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVD 443

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E  ++F  + K+F I P  EHY C++ +L R+G+  EA   + +     +   W  LL A
Sbjct: 444 EGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNA 503

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
             ++K+ + G+  AE L  +EP    T++LLSN++A    WD+V ++R+ M++  +KKEP
Sbjct: 504 CYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEP 563

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G+SW+E+++  + FT  D  H  +  IY  + ++   +   GYVP ++  LHD+E+ +K 
Sbjct: 564 GVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKV 623

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
             L +HSEKLAVA+GL+ TP GA I V KNLR+C DCHT+ + ISK+ +R I+VRD NRF
Sbjct: 624 DNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRF 683

Query: 758 HHFRNGSCSCGGYW 771
           HHF+NG CSCG YW
Sbjct: 684 HHFQNGCCSCGDYW 697



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 260/500 (52%), Gaps = 10/500 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF---DSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +LK     K+L  G  +H  +  T     DS     NSL+ +Y KC     +R+LFD++P
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGR 116
            R+VVSW++L + Y+      E    FK+MV+   I PNE+ +++ I++C  S   + G+
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGK 143

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           + HGY++K G +   +  NAL+ +Y+K  ++  A+ +   +   DI  +N V+ G + H 
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H   A+ + + + S  I  N  TY +  + CA ++   LG+Q+H  ++K +I  D  +G 
Sbjct: 204 HMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGS 263

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            ++DMY KCG++   R  F  +  +N+++W  +I+ + QN    EA +LF  M  + +  
Sbjct: 264 SIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPP 323

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           ++ T++ +  S A   A+ +  Q+HA + K+  + +  + N+LI  Y K G +  A  +F
Sbjct: 324 NEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVF 383

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              +  +++   ++IT ++  GLG+EAL ++ +M      P+      ++ ACA+L   +
Sbjct: 384 SNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVD 443

Query: 417 QGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAF-SEIPDRGIVSWSAMIGG 474
           +G     H++K F  +        +V + ++ G +D+A+    S   +  +VSW  ++  
Sbjct: 444 EGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNA 503

Query: 475 LAQH---GRGKEALQMFGQM 491
              H    +G++  +   Q+
Sbjct: 504 CYVHKHYDKGRKIAEYLLQL 523


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/673 (35%), Positives = 390/673 (57%), Gaps = 2/673 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+S + L  G ++H  ++   +  D  + N ++ MY KCG+  ++R +FD++P ++
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S Y      + A+  + +M+ SG  P+ F+  S++ +C+G  D  L R++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  + +D+ + NAL+ MY K   + DA+ VF  I   D++SW ++IAG     +   
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 181 ALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL  F++M S  +  PN F + SA  AC+ +   + GRQ+H   IK  + SD   G  L 
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLC 343

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG ++ AR +F+ + + +L+AWN +I+G        E++S F  M   G+  +  
Sbjct: 344 DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE- 358
           T+ ++L + +    +    QVH+  VK  F  D  + NSL+  Y KC ++ DA+++F++ 
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDI 463

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  D+V+  +++TA  Q     E L+L   M    I PD    +++L +   +++YE G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            Q+H  I+K G   D    N+L+NMY KCGS++ A + F  I +  I+SWS++I G AQ 
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GKEA ++F  M   GV PN IT V +L AC+H G+V E    + +M++ + I P +EH
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+L RAG    A + +  MPF  +  VW  LL A +++ N+EVG+ AAE +  I+
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKID 703

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+  V+L NI+AS+G W + A++R  M+   + K PG SWIE+KDKV+ F   D  H
Sbjct: 704 PSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLH 763

Query: 659 ARSKEIYAKLDEV 671
               +IY  L+E+
Sbjct: 764 PERGKIYTMLEEL 776



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 230/446 (51%), Gaps = 10/446 (2%)

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           LH     A  +FQ+  SS +     TYT  + AC+ +   E GR++H  ++    + D I
Sbjct: 77  LHREALKAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMI 134

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   ++ MY KCGS+ EAR +F  MP KN+++W  +ISG+ + G +  A +L+  M R G
Sbjct: 135 LQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSG 194

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D  T  +++KS +      + +Q+HA  +K+ F +D    N+LI  Y K   + DA+
Sbjct: 195 HIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAI 254

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANL 412
            +F      DL++  SMI  ++Q G   EAL  + EM  + +  P+ FV  S  +AC+ L
Sbjct: 255 NVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKL 314

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              + G+Q+H   IKFG  SD FAG SL +MYAKCG ++ A   F  I    +V+W+A+I
Sbjct: 315 LEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAII 374

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G A     KE+   F QM   G++PN +T++S+LCAC+   ++        S   K G 
Sbjct: 375 AGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI-QVHSYIVKMGF 433

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
                    ++ +  +     +A+++ + +  +A+   W  LL A              +
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTK 493

Query: 593 MLFA--IEPEKSSTHVLLSNIYASAG 616
           ++FA  I+P+    HV L+N+  S+G
Sbjct: 494 LMFASRIKPD----HVTLTNVLVSSG 515


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/574 (39%), Positives = 359/574 (62%), Gaps = 3/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y +A+  C G      GRQ+H  ++    +    +   LV MYA+CG++++A  +   MP
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV--C 317
           E+N+++W  +ISG+ QN    EA  LF  M R G   ++ TL++VL S    Q I     
Sbjct: 98  ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           KQVHA ++K  FE   ++ +SL+D Y +  ++++A ++F    A D+V+ T++++ Y + 
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           GL EEAL L+ ++ +  +  +    S LLNA + LS+ + GKQVH  I++          
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           NSL++MY+KCG +  + R F  +P+R +VSW+AM+ G  +HG   E +Q+F + + D V 
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLF-RFMCDKVK 336

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+ +TL++VL   +H GLV E    F+ + K+       +HY C+ID+LGR+G+ ++A+ 
Sbjct: 337 PDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALL 396

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
           L+  MPFQ   ++WG+LLGA R++ NV VG+  A+ LF IEPE +  +V+LSNIYA+A M
Sbjct: 397 LIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARM 456

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W +V ++R+ M    + KEPG SW+ +   ++TF   +R H R ++I  K++E+   +  
Sbjct: 457 WKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKA 516

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AG+VP +   LHDV++ +KE++L  HSEKLA+ FGL++TP   TI+V KNLRICVDCH  
Sbjct: 517 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 576

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +F+SK+  REI +RD NRFH    G+C+CG YW
Sbjct: 577 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 197/368 (53%), Gaps = 26/368 (7%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C  ++ L  G QVH  +V  G+    ++A  LV+MYA+CG   D+  + D +PER+VVSW
Sbjct: 45  CVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSW 104

Query: 65  NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG--DSLLGRKIHGYS 122
            ++ S Y   +   EA   F  M+ +G  PNEF+L+S++ +C GS        +++H ++
Sbjct: 105 TAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFA 164

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           IK  ++  MF  ++L+DMYA+  N+++A  VF  +   D+VS+  +++G      ++ AL
Sbjct: 165 IKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEAL 224

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
            LF+Q+ +  +  N  T++  L A +G+   + G+Q+H  +++ E+     +   L+DMY
Sbjct: 225 NLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMY 284

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           +KCG +  +R +F  MPE+++++WN ++ G+ ++G   E   LF +M  + V  D  TL 
Sbjct: 285 SKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTLL 343

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS------------LIDAYGKCGHVE 350
            VL   +           H   V    +  D+IV              +ID  G+ G +E
Sbjct: 344 AVLLGYS-----------HGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLE 392

Query: 351 DAVKIFKE 358
            A+ + ++
Sbjct: 393 KALLLIQK 400



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 206/415 (49%), Gaps = 15/415 (3%)

Query: 77  LEEAVCFFKEMV-----LSGIRPNEF-SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           L  AVCF +        L G     F    + I  C G      GR++H   +  GY   
Sbjct: 10  LAAAVCFARRSASAVAALPGAGAARFHDYDAAITECVGRRALREGRQVHARMVTAGYRPA 69

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           ++ A  LV MYA+ G LEDA  V   +   ++VSW A+I+G   +E    A  LF  M  
Sbjct: 70  LYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLR 129

Query: 191 SEINPNMFTYTSALKACAGME--LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +   PN FT  S L +C G +   +   +Q+H   IK   +    VG  L+DMYA+  ++
Sbjct: 130 AGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENI 189

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            EAR +F ++P ++++++  ++SG+ + G D EA +LF  +Y EG+  +Q T S +L ++
Sbjct: 190 QEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNAL 249

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +   ++   KQVH L ++        + NSLID Y KCG +  + ++F       +V+  
Sbjct: 250 SGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWN 309

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK- 427
           +M+  Y + G+  E ++L+  M D+ + PDS    ++L   ++    ++G  +  HI+K 
Sbjct: 310 AMLMGYGRHGMAYEVVQLFRFMCDK-VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKE 368

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHG 479
              + +T     ++++  + G ++ A     ++   P R I  W +++G    H 
Sbjct: 369 QSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAI--WGSLLGACRVHA 421


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/673 (35%), Positives = 390/673 (57%), Gaps = 2/673 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC+S + L  G ++H  ++   +  D  + N ++ MY KCG+  ++R +FD++P ++
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S Y      + A+  + +M+ SG  P+ F+  S++ +C+G  D  L R++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  + +D+ + NAL+ MY K   + DA+ VF  I   D++SW ++IAG     +   
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 181 ALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL  F++M S  +  PN F + SA  AC+ +   + GRQ+H   IK  + SD   G  L 
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLC 343

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG ++ AR +F+ + + +L+AWN +I+G        E++S F  M   G+  +  
Sbjct: 344 DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE- 358
           T+ ++L + +    +    QVH+  VK  F  D  + NSL+  Y KC ++ DA+++F++ 
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDI 463

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  D+V+  +++TA  Q     E L+L   M    I PD    +++L +   +++YE G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            Q+H  I+K G   D    N+L+NMY KCGS++ A + F  I +  I+SWS++I G AQ 
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GKEA ++F  M   GV PN IT V +L AC+H G+V E    + +M++ + I P +EH
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+L RAG    A + +  MPF  +  VW  LL A +++ N+EVG+ AAE +  I+
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKID 703

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+  V+L NI+AS+G W + A++R  M+   + K PG SWIE+KDKV+ F   D  H
Sbjct: 704 PSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLH 763

Query: 659 ARSKEIYAKLDEV 671
               +IY  L+E+
Sbjct: 764 PERGKIYTMLEEL 776



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 230/446 (51%), Gaps = 10/446 (2%)

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           LH     A  +FQ+  SS +     TYT  + AC+ +   E GR++H  ++    + D I
Sbjct: 77  LHREALKAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMI 134

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   ++ MY KCGS+ EAR +F  MP KN+++W  +ISG+ + G +  A +L+  M R G
Sbjct: 135 LQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSG 194

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D  T  +++KS +      + +Q+HA  +K+ F +D    N+LI  Y K   + DA+
Sbjct: 195 HIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAI 254

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANL 412
            +F      DL++  SMI  ++Q G   EAL  + EM  + +  P+ FV  S  +AC+ L
Sbjct: 255 NVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKL 314

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              + G+Q+H   IKFG  SD FAG SL +MYAKCG ++ A   F  I    +V+W+A+I
Sbjct: 315 LEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAII 374

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            G A     KE+   F QM   G++PN +T++S+LCAC+   ++        S   K G 
Sbjct: 375 AGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI-QVHSYIVKMGF 433

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
                    ++ +  +     +A+++ + +  +A+   W  LL A              +
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTK 493

Query: 593 MLFA--IEPEKSSTHVLLSNIYASAG 616
           ++FA  I+P+    HV L+N+  S+G
Sbjct: 494 LMFASRIKPD----HVTLTNVLVSSG 515


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/657 (37%), Positives = 379/657 (57%), Gaps = 3/657 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C+   D+  G++VHG+V   GFD+D +V N+L+++Y  CG   D+RRLFD +PER 
Sbjct: 165 VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERD 224

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSWN++     V+ D+ E    +F  ++ S I+PN  S+ S++   A   D  + R+IH
Sbjct: 225 VVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIH 284

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            YS+K+G DS + + NALVD Y K G+++    VF +    + VSWN++I G        
Sbjct: 285 CYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCW 344

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL  F+ M  +   PN  T +S L     +E  + G+++H   ++M  ++D  +   L+
Sbjct: 345 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 404

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G   EA  IFH +  +N+++WN +I+ +  N   +EA      M   G   +  
Sbjct: 405 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAV 464

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T + VL + A    +G  K++HA+ V+    SD ++ NSLID Y KCG +  A  +F  S
Sbjct: 465 TFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTS 524

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D V+   +I  Y++     ++L L+ EM+     PD      +++ACANL+A +QGK
Sbjct: 525 RK-DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGK 583

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH   ++    S  F  NSL++ Y KCG ID A R F++I  + + SW+ MI G    G
Sbjct: 584 EVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIG 643

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             + A+ MF  M +D V  + ++ ++VL AC+H GLV     +F  M  +  ++P + HY
Sbjct: 644 ELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHY 702

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+D+LGRAG  +EA +L+  +P   +A++WGALLGA RIY NVE+G+ AAE LF ++P
Sbjct: 703 TCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKP 762

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +    ++LLSNIYA  G WD   K+R  MK    KK PG SW+++ D+V+ F   +R
Sbjct: 763 QHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 819



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/593 (27%), Positives = 291/593 (49%), Gaps = 23/593 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPE- 58
           +L  C+  + L    QVH + +  GF      +  SL++ YAK  +      LF+   + 
Sbjct: 60  LLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQN 119

Query: 59  -RSVVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
            R+   WN+L   + +  +   +    +  MV  G++ ++ +   ++  C+ S D   G 
Sbjct: 120 CRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGM 179

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           ++HG   KLG+D+D++  N L+ +Y   G L DA  +F ++   D+VSWN +I   +L  
Sbjct: 180 EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIG--LLSV 237

Query: 177 HNDWALK---LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           + D+       F  +  S I PN+ +  S L   A +E +E+ R++HC  +K+ + S   
Sbjct: 238 NGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVT 297

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
               LVD Y KCGS+     +F+   EKN ++WN +I+G    G   +A + F  M   G
Sbjct: 298 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 357

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              +  T+S++L  +   +     K++H  S++   E+D +I NSLID Y K GH  +A 
Sbjct: 358 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAS 417

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            IF      ++V+  +MI  YA   L  EA++  ++MQ+    P++   +++L ACA L 
Sbjct: 418 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 477

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               GK++H   ++ G  SD F  NSL++MYAKCG +  A   F+    +  VS++ +I 
Sbjct: 478 FLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILII 536

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G ++     ++L +F +M   G  P+ ++ V V+ AC +   + + K       +  G+ 
Sbjct: 537 GYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGK-------EVHGVA 589

Query: 534 PMQEHYA------CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
                Y+       ++D   + G+   A  L + + F+  AS    +LG   I
Sbjct: 590 LRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMI 642



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 178/391 (45%), Gaps = 21/391 (5%)

Query: 198 FTYTSALKACAGMELKELGRQLHC-SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           + + + L  C+ ++     +Q+H   ++   +     +   L+  YAK         +F+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 257 LMPE--KNLIAWNIVISGH-LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
              +  +    WN +I  H +   G  +    +  M R GV  D  T   VLK  +   +
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCS--DS 172

Query: 314 IGVCK--QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
             +CK  +VH +  K  F++D Y+ N+L+  YG CG + DA ++F E    D+V+  ++I
Sbjct: 173 FDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTII 232

Query: 372 TAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
              +  G   EA   Y  M  R  I P+     SLL   A L   E  +++H + +K G 
Sbjct: 233 GLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGL 292

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            S     N+LV+ Y KCGS+    + F+E  ++  VSW+++I GLA  GR  +AL  F  
Sbjct: 293 DSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRM 352

Query: 491 MLEDGVLPNHITLVSVL-----CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           M++ G  PN +T+ S+L       C  AG   +  H F     + G +        +ID+
Sbjct: 353 MIDAGAQPNSVTISSILPVLVELECFKAG---KEIHGF---SMRMGTETDIFIANSLIDM 406

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLG 576
             ++G   EA  +   +  + N   W A++ 
Sbjct: 407 YAKSGHSTEASTIFHNLD-RRNIVSWNAMIA 436


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 356/598 (59%), Gaps = 4/598 (0%)

Query: 177 HNDWALKLFQQMK--SSEINP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           H  +A +L  Q K  S   +P N + Y S L++C   +  E G+QLH  L ++ I  +  
Sbjct: 35  HQSFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLD 94

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +   LV+ Y+ C S+  A  +F  +P+ NL  WN++I  +  NG    A SL+  M   G
Sbjct: 95  LATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYG 154

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  D  TL  VLK+ ++   IG  + +H   +++ +E D ++  +L+D Y KCG V DA 
Sbjct: 155 LKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDAR 214

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +F +    D V   SM+ AYAQ G  +E+L L  EM  + + P      +++++ A+++
Sbjct: 215 HVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIA 274

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               G+++H    + GF  +     +L++MYAKCGS+  A   F  + ++ +VSW+A+I 
Sbjct: 275 CLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIIT 334

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G A HG   EAL +F +M+++   P+HIT V  L AC+   L+ E +  +  M +   I 
Sbjct: 335 GYAMHGLAVEALDLFERMMKEAQ-PDHITFVGALAACSRGRLLDEGRALYNLMVRDCRIN 393

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY CM+D+LG  G+  EA +L+  M    ++ VWGALL + + + NVE+ + A E 
Sbjct: 394 PTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEK 453

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  +EP+ S  +V+L+N+YA +G W+ VA++R+ M D  +KK    SWIEVK+KVY F  
Sbjct: 454 LIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLS 513

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD SH  S  IYA+L  +  L+ +AGYVP   +  HDVEE EK  ++  HSE+LA+AFGL
Sbjct: 514 GDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGL 573

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I+T PG  + + KNLRIC DCH + +FISKI  REI VRDVNR+HHFR+G CSCG YW
Sbjct: 574 ISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 205/403 (50%), Gaps = 7/403 (1%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           N +  +S++ +C  +     G+++H    +LG   ++  A  LV+ Y+   +L +A  +F
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
             I   ++  WN +I     +  ++ A+ L+ QM    + P+ FT    LKAC+ +    
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            GR +H  +I+   + D  VG  LVDMYAKCG + +AR +F  + +++ + WN +++ + 
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYA 236

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           QNG   E+ SL   M  +GV   + TL TV+ S A    +   +++H    +  F+ +D 
Sbjct: 237 QNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDK 296

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           +  +LID Y KCG V+ A  +F+      +V+  ++IT YA  GL  EAL L+  M  +E
Sbjct: 297 VKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM-KE 355

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDA 453
             PD       L AC+     ++G+ ++  +++   ++ T    + +V++   CG +D+A
Sbjct: 356 AQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEA 415

Query: 454 D---RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
               R    +PD G+  W A++     HG  + A     +++E
Sbjct: 416 YDLIRQMDVMPDSGV--WGALLNSCKTHGNVELAEVALEKLIE 456



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 236/517 (45%), Gaps = 55/517 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C S K L  G Q+H  +   G   +  +A  LV  Y+ C +  ++  LFD IP+ +
Sbjct: 64  LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGN 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN L   Y      E A+  + +M+  G++P+ F+L  ++ AC+       GR IH 
Sbjct: 124 LFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHE 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I+ G++ D+F   ALVDMYAK G + DA  VF  I   D V WN+++A    + H D 
Sbjct: 184 RVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDE 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           +L L  +M +  + P   T  + + + A +     GR++H    +   + +  V   L+D
Sbjct: 244 SLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALID 303

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  A ++F  + EK +++WN +I+G+  +G  +EA  LF  M +E    D  T
Sbjct: 304 MYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQP-DHIT 362

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + +  + +   + ++ L V+      D  +N  ++ Y                 
Sbjct: 363 FVGALAACSRGRLLDEGRALYNLMVR------DCRINPTVEHY----------------- 399

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                  T M+      G  +EA  L  +M   ++ PDS V  +LLN+C      E  + 
Sbjct: 400 -------TCMVDLLGHCGQLDEAYDLIRQM---DVMPDSGVWGALLNSCKTHGNVELAE- 448

Query: 421 VHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VSW----- 468
             V + K   +    +GN   L NMYA+ G  +   R    + D+GI      SW     
Sbjct: 449 --VALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKN 506

Query: 469 --SAMIGGLAQHGRG----KEALQMFGQMLEDGVLPN 499
              A + G   H        E  ++ G M E G +P+
Sbjct: 507 KVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPD 543


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/638 (38%), Positives = 376/638 (58%), Gaps = 15/638 (2%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++  YA  G LEDA+ +F ++   D++SWN+++ GC+       A  +F +M       N
Sbjct: 87  MIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSER----N 142

Query: 197 MFTYTSALKACAGMELKELGR-QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           + ++T+ +       L E GR ++   L ++    D      +V  +   G +++A  +F
Sbjct: 143 VVSWTTIING-----LLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELF 197

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT--TLSTVLKSVASFQA 313
             MP +N+I+W  VI G   NG   EA  +F  M      F  T  TL+  L + A+   
Sbjct: 198 EKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML---ASFKATSSTLACALTACANICT 254

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
             +  Q+H L VKT +  ++YI  SLI  Y  C  +++A  IF ++ + ++V  T+++T 
Sbjct: 255 PFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTG 314

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y       +AL+++  M    + P+    +S LN+C  L A ++G++VH    K G  SD
Sbjct: 315 YGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESD 374

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F  NSLV MY KCG I+D    F+ +  + +VSW+++I G AQHG G+ AL +F QM+ 
Sbjct: 375 IFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIR 434

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
             V P+ ITL  +L AC H+G++ + +  F+   K FGI+   EHY+ M+D+LGR G+ +
Sbjct: 435 TRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLE 494

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA  L+  MP +AN  VW ALL ++  + NV V + AA+ +  ++P  S+ + LLSN+YA
Sbjct: 495 EAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYA 554

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
           S G W  V+K+R+ MKD  + K+PG SWI +K   + F  GD+SH  S++IY KL+ +  
Sbjct: 555 STGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGG 614

Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
            L + GYVP  +   HDVE  +KE++L +HSE+LA+ FGLI+T  G+TI V KNLRIC D
Sbjct: 615 KLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGD 674

Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           CH + +  SK+V REI+VRD +RFHHF NG+CSCG YW
Sbjct: 675 CHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 218/441 (49%), Gaps = 11/441 (2%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           YA  G   D+ +LF  +P + ++SWNS+    + C  L  A   F +M       N  S 
Sbjct: 91  YADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMS----ERNVVSW 146

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           +++IN     G   +   +     ++    D+ + N++V  +   G +EDA+ +F+ + +
Sbjct: 147 TTIINGLLEFGRVEVAECL----FRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPN 202

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            +++SW +VI G   +  +  AL +F +M +S       T   AL ACA +    +G Q+
Sbjct: 203 RNVISWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTACANICTPFIGVQI 261

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  ++K     +  +   L+  YA C  +D A  IF+    +N++ W  +++G+  N   
Sbjct: 262 HGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRH 321

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            +A  +F  M R  V  +Q++L++ L S    +A+   ++VHA++ K   ESD ++ NSL
Sbjct: 322 TDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSL 381

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +  Y KCGH+ D + +F   S  ++V+  S+I   AQ G G  AL L+ +M    ++PD 
Sbjct: 382 VVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDE 441

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
              + LL+AC +     +G+    H  K FG        +S+V++  + G +++A+    
Sbjct: 442 ITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIH 501

Query: 459 EIPDRG-IVSWSAMIGGLAQH 478
            +P +   + W A++     H
Sbjct: 502 IMPGKANYMVWLALLSSSINH 522



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 157/285 (55%), Gaps = 18/285 (6%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC +    F+G+Q+HG++V TG+  +E+++ SL+  YA C    ++  +F+    R+V
Sbjct: 246 LTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNV 305

Query: 62  VSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V W +L + Y ++C    +A+  FK M+   + PN+ SL+S +N+C G      GR++H 
Sbjct: 306 VVWTALLTGYGLNCRH-TDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHA 364

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            + KLG +SD+F +N+LV MY K G++ D +AVF  +   ++VSWN++I GC  H    W
Sbjct: 365 VAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRW 424

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKAC--AGME------LKELGRQLHCSLIKMEIKSDP 232
           AL LF QM  + ++P+  T    L AC  +GM        K  G+     +      S  
Sbjct: 425 ALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSS-- 482

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQN 276
                +VD+  + G ++EA  + H+MP K N + W  ++S  + +
Sbjct: 483 -----MVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINH 522



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 199/401 (49%), Gaps = 19/401 (4%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           NS+V  +   G   D+  LF+ +P R+V+SW S+     H     EA+  F +M L+  +
Sbjct: 178 NSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM-LASFK 236

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
               +L+  + ACA      +G +IHG  +K GY  + + + +L+  YA    +++A ++
Sbjct: 237 ATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSI 296

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F D    ++V W A++ G  L+  +  AL++F+ M    + PN  + TSAL +C G+E  
Sbjct: 297 FNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAV 356

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           + GR++H    K+ ++SD  V   LV MY KCG +++   +F  M  KN+++WN +I G 
Sbjct: 357 DRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGC 416

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV--ASFQAIGVCKQVHALSVKTAFES 331
            Q+G    A +LF  M R  V  D+ TL+ +L +   +     G C   H        E 
Sbjct: 417 AQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKH-FGKNFGIEM 475

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIF-----KESSAVDLVACTSMITAYAQFGLGEEALKL 386
            +   +S++D  G+ G +E+A  +      K +  V L   +S I  ++   + E A K 
Sbjct: 476 TNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSIN-HSNVHVAERAAKC 534

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
            L++Q     P+   CS+     +NL A   GK   V  I+
Sbjct: 535 VLDLQ-----PN---CSAAYTLLSNLYA-STGKWTEVSKIR 566



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 176/428 (41%), Gaps = 81/428 (18%)

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGF---------DQTTLSTVL--------KSVA 309
           N ++S HL+NG   EA SLF  M   GV           D+  L   L        K + 
Sbjct: 54  NYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLI 113

Query: 310 SFQAI-----------GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           S+ ++             C     +S +    S   I+N L++     G VE A  +F+ 
Sbjct: 114 SWNSMLKGCLKCGDLTMACNMFDKMSERNVV-SWTTIINGLLEF----GRVEVAECLFRV 168

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI------------NPDSF------ 400
               D+ A  SM+  +   G  E+A++L+ +M +R +            N  SF      
Sbjct: 169 MPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVF 228

Query: 401 ---------VCSSL---LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
                      S+L   L ACAN+     G Q+H  I+K G+  + +   SL++ YA C 
Sbjct: 229 HKMLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCK 288

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            ID+A   F++   R +V W+A++ G   + R  +ALQ+F  M+   VLPN  +L S L 
Sbjct: 289 LIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALN 348

Query: 509 ACNHAGLVA-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
           +C   GL A +      ++  K G++        ++ +  + G   + + +   M  + N
Sbjct: 349 SC--CGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKN 405

Query: 568 ASVWGALLGAARIYKNVEVGQHA----AEMLFA--IEPEKSSTHVLLSNIYASAGMWDNV 621
              W +++        V   QH     A  LFA  I        + L+ + ++ G    +
Sbjct: 406 VVSWNSII--------VGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGML 457

Query: 622 AKVRRFMK 629
            K R F K
Sbjct: 458 TKGRCFFK 465



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 6/180 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C   + +  G +VH +    G +SD FV+NSLVVMY KCG+  D   +F  +  ++V
Sbjct: 347 LNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNV 406

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR---KI 118
           VSWNS+        F   A+  F +M+ + + P+E +L+ +++AC  SG    GR   K 
Sbjct: 407 VSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKH 466

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
            G +  +   ++ +S  ++VD+  + G LE+A A+   +    + + W A+++  + H +
Sbjct: 467 FGKNFGIEMTNEHYS--SMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSN 524



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 37/257 (14%)

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G  +    + P+ ++  V   +TT      S+ S+  +   K++  L+   +        
Sbjct: 7   GAKLLTTKILPFSFQLSVSIVRTT-----SSLISYICLFGTKKLSILTTPPS-------- 53

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-I 395
           N L+  + + G +++A  +F + S+  +   T MI  YA  G  E+ALKL+ EM  ++ I
Sbjct: 54  NYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLI 113

Query: 396 NPDSFV-----CSSLLNACANLSAYEQGKQVHVHIIKFGFM-----------------SD 433
           + +S +     C  L  AC       +   V    I  G +                  D
Sbjct: 114 SWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKD 173

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             A NS+V+ +   G ++DA   F ++P+R ++SW+++IGGL  +GR  EAL +F +ML 
Sbjct: 174 VTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA 233

Query: 494 DGVLPNHITLVSVLCAC 510
                   TL   L AC
Sbjct: 234 S-FKATSSTLACALTAC 249



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 31/170 (18%)

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           T   N L++ + + G ID+A   F+++   G+  ++ MIGG A  GR ++AL++F +M  
Sbjct: 50  TPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEM-- 107

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK------------------------ 529
              + + I+  S+L  C   G +  A + F+ M ++                        
Sbjct: 108 --PVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECL 165

Query: 530 FGIQPMQEHYA--CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           F + P ++  A   M+      G+ ++A+EL + MP   N   W +++G 
Sbjct: 166 FRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMP-NRNVISWTSVIGG 214


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/657 (37%), Positives = 379/657 (57%), Gaps = 3/657 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C+   D+  G++VHG+V   GFD+D +V N+L+++Y  CG   D+RRLFD +PER 
Sbjct: 16  VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERD 75

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSWN++     V+ D+ E    +F  ++ S I+PN  S+ S++   A   D  + R+IH
Sbjct: 76  VVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIH 135

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            YS+K+G DS + + NALVD Y K G+++    VF +    + VSWN++I G        
Sbjct: 136 CYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCW 195

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL  F+ M  +   PN  T +S L     +E  + G+++H   ++M  ++D  +   L+
Sbjct: 196 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G   EA  IFH +  +N+++WN +I+ +  N   +EA      M   G   +  
Sbjct: 256 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAV 315

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T + VL + A    +G  K++HA+ V+    SD ++ NSLID Y KCG +  A  +F  S
Sbjct: 316 TFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTS 375

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D V+   +I  Y++     ++L L+ EM+     PD      +++ACANL+A +QGK
Sbjct: 376 RK-DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGK 434

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +VH   ++    S  F  NSL++ Y KCG ID A R F++I  + + SW+ MI G    G
Sbjct: 435 EVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIG 494

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             + A+ MF  M +D V  + ++ ++VL AC+H GLV     +F  M  +  ++P + HY
Sbjct: 495 ELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHY 553

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+D+LGRAG  +EA +L+  +P   +A++WGALLGA RIY NVE+G+ AAE LF ++P
Sbjct: 554 TCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKP 613

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +    ++LLSNIYA  G WD   K+R  MK    KK PG SW+++ D+V+ F   +R
Sbjct: 614 QHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 254/503 (50%), Gaps = 19/503 (3%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           MV  G++ ++ +   ++  C+ S D   G ++HG   KLG+D+D++  N L+ +Y   G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKSSEINPNMFTYTSA 203
           L DA  +F ++   D+VSWN +I   +L  + D+       F  +  S I PN+ +  S 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIG--LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISL 118

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L   A +E +E+ R++HC  +K+ + S       LVD Y KCGS+     +F+   EKN 
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN +I+G    G   +A + F  M   G   +  T+S++L  +   +     K++H  
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S++   E+D +I NSLID Y K GH  +A  IF      ++V+  +MI  YA   L  EA
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           ++  ++MQ+    P++   +++L ACA L     GK++H   ++ G  SD F  NSL++M
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG +  A   F+    +  VS++ +I G ++     ++L +F +M   G  P+ ++ 
Sbjct: 359 YAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA------CMIDILGRAGKFQEAME 557
           V V+ AC +   + + K       +  G+      Y+       ++D   + G+   A  
Sbjct: 418 VGVISACANLAALKQGK-------EVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACR 470

Query: 558 LVDTMPFQANASVWGALLGAARI 580
           L + + F+  AS    +LG   I
Sbjct: 471 LFNQILFKDVASWNTMILGYGMI 493


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/582 (41%), Positives = 351/582 (60%), Gaps = 5/582 (0%)

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVGLVDMYAKCGSMDEA 251
           ++PN  +  S +++    +   LGR  H  +IK      P  +   LV+MY+K    + A
Sbjct: 4   LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           +++  L P ++++ W  +I+G +QNG    A   F  M R+ +  +  T     K+  S 
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
           ++  V KQVHAL+VK    SD ++  S  D Y K G  E+A K+F E    ++    + +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
           +     G  ++AL  ++E +   I P  F+ SS+L+ACA LS  E GK VH   +K   +
Sbjct: 182 SNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 241

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            + F G++LV+MY KCGSI+DA+RAF E+P+R +V+W+AMIGG A  G+   A+ +F +M
Sbjct: 242 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 301

Query: 492 L--EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
                 V PN++T V VL AC+ AG V      FESM  ++GI+P  EHYAC++D+LGRA
Sbjct: 302 TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRA 361

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G  ++A + +  MP +   SVWGALLGA++++   E+G+ AA+ LF ++P  S  HVLLS
Sbjct: 362 GMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLS 421

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           N++A+AG W+    VR+ MKD  +KK  G SWI   + V+ F   D SH R+ EI A L 
Sbjct: 422 NMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLA 481

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
           ++   +  AGY+P     L D+EE EK   +++HSEK+A+AFGLI+ P G  IR+ KNLR
Sbjct: 482 KLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 541

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IC DCH++ +FIS IV REIIVRD N FH FR+  CSC  YW
Sbjct: 542 ICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 213/430 (49%), Gaps = 19/430 (4%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK-LGYDSDMFSANALVDMYAKVGNLEDA 150
           + PN  SL+S++ +   +  S LGR  H   IK L      F  N LV+MY+K+     A
Sbjct: 4   LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             +     +  +V+W A+IAG V +     AL  F  M+   I PN FT+  A KA   +
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
               +G+Q+H   +K    SD  VG    DMY+K G  +EAR +F  MPE+N+  WN  +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           S  +  G   +A + F    +EG+      +S+VL + A    + V K VH L+VK    
Sbjct: 182 SNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 241

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            + ++ ++L+D YGKCG +EDA + F E    +LV   +MI  YA  G  + A+ L+ EM
Sbjct: 242 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 301

Query: 391 Q--DREINPD--SFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYA 445
                 + P+  +FVC  +L+AC+   +   G ++   +  ++G          +V++  
Sbjct: 302 TCGSHRVAPNYVTFVC--VLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLG 359

Query: 446 KCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQM--LEDGVLPN 499
           + G ++ A +   ++P R  VS W A++G     G+   GK A     ++  L+ G   N
Sbjct: 360 RAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSG---N 416

Query: 500 HITLVSVLCA 509
           H+ L ++  A
Sbjct: 417 HVLLSNMFAA 426



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 207/459 (45%), Gaps = 43/459 (9%)

Query: 13  LGLQVHGIVVFTGFDSD--EFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           LG   H  ++ T  D+    F+ N LV MY+K      ++ L    P RSVV+W +L + 
Sbjct: 24  LGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
            V       A+  F  M    I+PN+F+      A       L+G+++H  ++K G  SD
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F   +  DMY+K G  E+A  +F ++   +I +WNA ++  VL    D AL  F + + 
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARK 202

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             I P  F  +S L ACAG+ + E+G+ +H   +K  +  +  VG  LVDMY KCGS+++
Sbjct: 203 EGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 262

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY--REGVGFDQTTLSTVLKSV 308
           A   F  MPE+NL+ WN +I G+   G    A +LF  M      V  +  T   VL + 
Sbjct: 263 AERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSAC 322

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +            A SV    E    I  S+   YG    +E   + +  +  VDL+   
Sbjct: 323 S-----------RAGSVNVGME----IFESMRGRYG----IEPGAEHY--ACVVDLLGRA 361

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
            M+    QF            ++   I P   V  +LL A       E GK    ++ + 
Sbjct: 362 GMVEQAYQF------------IKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFEL 409

Query: 429 GFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
             +    +GN   L NM+A  G  ++A     E+ D GI
Sbjct: 410 DPLD---SGNHVLLSNMFAAAGRWEEATLVRKEMKDVGI 445



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 151/293 (51%), Gaps = 8/293 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            KA  S +   +G QVH + V  G  SD FV  S   MY+K G   ++R++FD +PER++
Sbjct: 115 FKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNI 174

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            +WN+  S  V     ++A+  F E    GI P +F +SS+++ACAG     +G+ +H  
Sbjct: 175 ATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTL 234

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K     ++F  +ALVDMY K G++EDA   F ++   ++V+WNA+I G       D A
Sbjct: 235 AVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMA 294

Query: 182 LKLFQQMK--SSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGL 238
           + LF +M   S  + PN  T+   L AC+      +G ++  S+  +  I+        +
Sbjct: 295 VTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV 354

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIA-WNIVISGHLQNG----GDMEAASLF 286
           VD+  + G +++A      MP +  ++ W  ++      G    G + A +LF
Sbjct: 355 VDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLF 407



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 4/173 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L +G  VH + V      + FV ++LV MY KCG+  D+ R FD +PER+
Sbjct: 215 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 274

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR--PNEFSLSSMINACAGSGDSLLGRKI 118
           +V+WN++   Y H    + AV  F EM     R  PN  +   +++AC+ +G   +G +I
Sbjct: 275 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 334

Query: 119 -HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVI 169
                 + G +        +VD+  + G +E A    K +   P +  W A++
Sbjct: 335 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 387


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/780 (33%), Positives = 424/780 (54%), Gaps = 15/780 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVV-FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L A  S  DL  G   H  V   +G  SD  VA +++ MY +CG+   +RR FDA+  R
Sbjct: 47  ILDAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVR 106

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSW+++ + Y       +A+  F  M   G++ N  +  S+++ACA      LG+ IH
Sbjct: 107 NVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIH 166

Query: 120 GYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
              +  G    D+   N +V+MY K G ++ A  VF+ +E  + V+WN +IA C  H+  
Sbjct: 167 ERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRY 226

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A  L  +M    + PN  T  S + ACA M+    GR +H  +    ++SD  V   L
Sbjct: 227 KEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANAL 286

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V++Y KCG +  AR     +  ++ I+W  +++ + ++G    A ++   M  EGV  D 
Sbjct: 287 VNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDS 346

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   +L+S  +  A+ + +++H    ++  E D  +  +L+D YGKCG+ + A + F  
Sbjct: 347 FTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDR 406

Query: 359 SSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
            S V D+    +++ AY     G+E L ++  M  + + PD+    S+L+ACA+L+A   
Sbjct: 407 MSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGL 466

Query: 418 GKQVHVHIIKFGFM------SDTFAGNSLVNMYAKCGSIDDADRAFSEIPD---RGIVSW 468
           G+  H  +++ G        S      S++NMYAKCGS+ DA   F++        +V+W
Sbjct: 467 GRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAW 526

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           SAM+   +Q G  +EAL+ F  M ++GV P+ ++ VS +  C+H+GLV EA   F S+  
Sbjct: 527 SAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRH 586

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
             GI P + H+AC++D+L RAG  +EA  L+   P  A+ S W  LL A R Y ++E  +
Sbjct: 587 DHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERAR 646

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
             A  L ++     S + LL++++  +  WD+V   R+ + +     +PG SWIE+ ++V
Sbjct: 647 RVAARLASL--RSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRV 704

Query: 649 YTFTVG-DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKL 707
           Y F  G DR   R +EI+A+L+ +   + KAGY       +HD  E EK+ LL +HSEK+
Sbjct: 705 YEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKV 764

Query: 708 AVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           AV FGLI+TP G  +R+ KN+ +C DCH   + IS++  R I +RD   FH F +GSCSC
Sbjct: 765 AVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 824



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 239/458 (52%), Gaps = 3/458 (0%)

Query: 56  IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           + +RS  SWN   + Y        A+  F+ M L G+ P+  S  ++++A A  GD   G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 116 RKIHGYSIKL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
              H    +  G  SD+  A A++ MY + G++  A   F  +   ++VSW+A+IA    
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
             H   AL+LF +M    +  N  T+ S L ACA M    LG+ +H  ++   +  D ++
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 235 -GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
            G  +V+MY KCG +D AR +F  M  KN + WN +I+   ++    EA +L   M  +G
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  ++ TL +V+ + A  Q+I   + VH +      ESD+ + N+L++ YGKCG +  A 
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
              +     D ++ T+++ AYA+ G G+ A+ +   M    +  DSF   +LL +C  ++
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMI 472
           A   G+++H  + + G   D     +LV+MY KCG+ D A RAF  + D R +  W+A++
Sbjct: 361 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALL 420

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
                  +GKE L +F +M   GV P+ +T +S+L AC
Sbjct: 421 AAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDAC 458



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 166/322 (51%), Gaps = 4/322 (1%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M +++  +WN+ I+ + +NG    A  +F  M  EGV  D+ +   +L + AS   +   
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 318 KQVH-ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
           +  H  +   +   SD  +  +++  Y +CG V  A + F      ++V+ ++MI AYAQ
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTF 435
            G   +AL+L++ M    +  ++    S+L+ACA++ A   GK +H  I+  G +  D  
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
            GN++VNMY KCG +D A   F  +  +  V+W+ MI   ++H R KEA  + G+M  DG
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           + PN ITLVSV+ AC     +   +   E +  + G++        ++++ G+ GK + A
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGE-GLESDNTVANALVNLYGKCGKLRAA 299

Query: 556 MELVDTMPFQANASVWGALLGA 577
              ++ +  +   S W  LL A
Sbjct: 300 RHALEGIETRDKIS-WTTLLAA 320


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/580 (42%), Positives = 348/580 (60%), Gaps = 2/580 (0%)

Query: 194 NPNMFT-YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           +PN +  YTS L++C        GRQLH  L+   +  D ++   LVD+YA CG +  AR
Sbjct: 58  SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHAR 117

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP++N+  WN++I  + ++G    A  L+  M   GV  D  T    LK+ A+  
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALL 177

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   ++VH   + T +  D ++   L+D Y KCG V+DA  +F      D V   SMI 
Sbjct: 178 DLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIA 237

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           AY Q G   EAL L  +M    + P      S ++A A+ +A  +G+++H    + GF  
Sbjct: 238 AYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDR 297

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM- 491
                 SLV+MYAK G +  A   F ++  R +VSW+AMI G   HG   EAL++F +M 
Sbjct: 298 QDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMR 357

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           +E  V P++IT V VL ACNH G+V EAK  F  M   + I+P  +H+ C++D+LG AG+
Sbjct: 358 VEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGR 417

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
           F+EA +L+  MP Q ++ +WGALL   +I+KNVE+G+ A + L  +EPE +  +VLLSNI
Sbjct: 418 FEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNI 477

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV 671
           YA +G W+  A+VR+ M +  LKK  G SWIE+K K + F VGD SH RS EIY +L+ +
Sbjct: 478 YAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERL 537

Query: 672 SDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRIC 731
             L++ AGY+P      HDV + EK  ++  HSE+LA+AFGLI+TP G  + V KNLR+C
Sbjct: 538 EGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVC 597

Query: 732 VDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            DCH   + IS+IV REII+RDVNR+HHF NG CSC  YW
Sbjct: 598 EDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 235/518 (45%), Gaps = 55/518 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL++C + + L  G Q+HG ++ +G   D  +A  LV +YA CG    +RRLFD +P+R+
Sbjct: 68  VLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRN 127

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  WN L   Y      E A+  ++ MV  G+ P+ F+    + ACA   D   GR++H 
Sbjct: 128 VFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHE 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +   +  DMF    LVDMYAK G ++DA AVF  I   D V WN++IA    +     
Sbjct: 188 RVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPME 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L + M ++ + P + T  S + A A       GR+LH    +        +   LVD
Sbjct: 248 ALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVD 307

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MYAK G +  AR++F  + ++ L++WN +I G+  +G   EA  LF  M  E  V  D  
Sbjct: 308 MYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNI 367

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL +         C   H   VK A E        ++D Y     ++  V+ F   
Sbjct: 368 TFVGVLSA---------CN--HGGMVKEAKE----FFGLMVDVYS----IKPTVQHF--- 405

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                   T ++      G  EEA  L   M    + PDS +  +LLN C      E G+
Sbjct: 406 --------TCLVDVLGHAGRFEEAYDLIKGM---PMQPDSGIWGALLNGCKIHKNVELGE 454

Query: 420 QVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMI 472
                +I+   +    AGN   L N+YA+ G  + A R    + +RG+      SW  + 
Sbjct: 455 LALQKLIE---LEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELK 511

Query: 473 G-------GLAQHGRGKEALQ----MFGQMLEDGVLPN 499
           G       G A H R  E  +    + G M + G +P+
Sbjct: 512 GKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPD 549



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 205/408 (50%), Gaps = 23/408 (5%)

Query: 94  PNEFS-LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
           PN +   +S++ +C  S     GR++HG  +  G   D   A  LVD+YA  G +  A  
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  +   ++  WN +I        ++ A++L++ M    + P+ FTY  ALKACA +  
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
            E GR++H  ++      D  V  GLVDMYAKCG +D+AR +F  +  ++ + WN +I+ 
Sbjct: 179 LETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAA 238

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + QNG  MEA SL   M   GVG    TL + + + A   A+   +++H    +  F+  
Sbjct: 239 YGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQ 298

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ- 391
           D +  SL+D Y K G V+ A  +F++    +LV+  +MI  Y   G  +EALKL+ +M+ 
Sbjct: 299 DKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRV 358

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMY 444
           + ++ PD+     +L+AC +    ++ K+       FG M D ++          LV++ 
Sbjct: 359 EAQVTPDNITFVGVLSACNHGGMVKEAKEF------FGLMVDVYSIKPTVQHFTCLVDVL 412

Query: 445 AKCGSIDDAD---RAFSEIPDRGIVSWSAMIGGLAQHGR---GKEALQ 486
              G  ++A    +     PD GI  W A++ G   H     G+ ALQ
Sbjct: 413 GHAGRFEEAYDLIKGMPMQPDSGI--WGALLNGCKIHKNVELGELALQ 458


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 348/570 (61%), Gaps = 1/570 (0%)

Query: 202 SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           S L+ACA      LGR +H S +K  +         L+DMYAKCG +D A ++F LM  +
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
            ++ W  +I+ + + G   EA  LF  M REGV  D  T++TVL + A   ++   K VH
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
               +   +S+ ++ N+L+D Y KCG +EDA  +F E    D+++  +MI  Y++  L  
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EAL L+ +M   E+ PD    + +L ACA+L++ ++GK+VH HI++ GF SD    N+LV
Sbjct: 183 EALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MY KCG    A   F  IP + +++W+ MI G   HG G  A+  F +M + G+ P+ +
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           + +S+L AC+H+GL+ E    F  M+ +  ++P  EHYAC++D+L R+GK   A + + +
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP + +A++WGALL   RI+ +V++ +  AE +F +EPE +  +VLL+N YA A  W+ V
Sbjct: 362 MPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEV 421

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV 681
            K+R+ +    LKK PG SWIEVK KV+ F  G+ SH ++K+I   L  +   + + GY 
Sbjct: 422 KKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYF 481

Query: 682 PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           P     L + +  +KE  L  HSEKLA+AFG++  PP  TIRV KNLR+C DCH   +FI
Sbjct: 482 PKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFI 541

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           SK + REI++RD NRFHHF++G C C G+W
Sbjct: 542 SKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 226/451 (50%), Gaps = 20/451 (4%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           + S++ ACA  GD  LGR +HG  +K          N L+DMYAK G L+ A+ VF  + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
              +V+W ++IA       +D A++LF +M    ++P++FT T+ L ACA     E G+ 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  + + +++S+  V   L+DMYAKCGSM++A  +F  MP K++I+WN +I G+ +N  
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             EA SLF  M  E +  D TTL+ +L + AS  ++   K+VH   ++  F SD  + N+
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D Y KCG    A  +F      DL+  T MI  Y   G G  A+  + EM+   I PD
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSID 451
                S+L AC++    ++G +       F  M D             +V++ A+ G + 
Sbjct: 300 EVSFISILYACSHSGLLDEGWRF------FNVMQDECNVKPKLEHYACIVDLLARSGKLA 353

Query: 452 DADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            A +    +P +     W A++ G   H   K A ++   + E   L    T   VL A 
Sbjct: 354 MAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE---LEPENTGYYVLLAN 410

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            +A   AE     + + +K G + ++++  C
Sbjct: 411 TYAE--AEKWEEVKKLRQKIGRRGLKKNPGC 439



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 173/305 (56%), Gaps = 1/305 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC +  D+ LG  VHG  V           N+L+ MYAKCG    +  +FD +  R+
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W SL + Y      +EA+  F EM   G+ P+ F+++++++ACA +G    G+ +H 
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +    S++F  NAL+DMYAK G++EDA +VF ++   DI+SWN +I G   +   + 
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF  M   E+ P+  T    L ACA +   + G+++H  +++    SD  V   LVD
Sbjct: 184 ALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG    AR++F ++P K+LI W ++I+G+  +G    A + F  M + G+  D+ +
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 301 LSTVL 305
             ++L
Sbjct: 303 FISIL 307



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 144/275 (52%), Gaps = 5/275 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G  VH  +      S+ FV N+L+ MYAKCG+  D+  +F  +P + 
Sbjct: 105 VLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKD 164

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SWN++   Y       EA+  F +MVL  ++P+  +L+ ++ ACA       G+++HG
Sbjct: 165 IISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHG 223

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + ++ G+ SD   ANALVDMY K G    A  +F  I   D+++W  +IAG  +H   + 
Sbjct: 224 HILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNN 283

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           A+  F +M+ + I P+  ++ S L AC+   L + G +   ++++ E    P +     +
Sbjct: 284 AITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFF-NVMQDECNVKPKLEHYACI 342

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           VD+ A+ G +  A      MP E +   W  ++SG
Sbjct: 343 VDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S   L  G +VHG ++  GF SD+ VAN+LV MY KCG  + +R LFD IP + 
Sbjct: 205 ILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKD 264

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +++W  + + Y    F   A+  F EM  +GI P+E S  S++ AC+ SG  LL      
Sbjct: 265 LITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSG--LLDEGWRF 322

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           +++   +      +     +VD+ A+ G L  A    K +   PD   W A+++GC +H 
Sbjct: 323 FNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHH 382

Query: 177 HNDWALKLFQQMKSSEINP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
               A K+ + +   E+ P N   Y       A  E  E  ++L   + +  +K +P
Sbjct: 383 DVKLAEKVAEHV--FELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNP 437


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 367/608 (60%), Gaps = 33/608 (5%)

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P++F++   L++C       LG+QLH  +I     SD  +   L+++Y+KCG +D A  +
Sbjct: 52  PSLFSHL--LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITL 109

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM--------------------YREGV 294
           F +MP KN+++ NI+I+G+ ++G  + A  +F  M                      EG+
Sbjct: 110 FGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGL 169

Query: 295 GF-----------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
           G            D+  L +VL+  A  +A+   +QVH    K  FE +  +V+SL   Y
Sbjct: 170 GLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMY 229

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            KCG + +  ++ +   + ++VA  ++I   AQ G  EE L  Y  M+     PD     
Sbjct: 230 MKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFV 289

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           S++++C+ L+   QG+Q+H  +IK G        +SL++MY++CG ++ + + F E  + 
Sbjct: 290 SVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENG 349

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
            +V WS+MI     HGRG EA+ +F QM ++ +  N +T +S+L AC+H GL  +    F
Sbjct: 350 DVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFF 409

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKN 583
           + M +K+G++P  EHY CM+D+LGR G  +EA  L+ +MP +A+   W  LL A +I+K 
Sbjct: 410 DLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKK 469

Query: 584 VEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
            E+ +  +E +F ++P     +VLLSNI+AS   WD+V+ VR+ M+D KLKKEPG+SW+E
Sbjct: 470 TEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLE 529

Query: 644 VKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHH 703
           VK++++ F +GD+SH +S EI + L E++  + K GYVP +++ LHD++  +KE  L HH
Sbjct: 530 VKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHH 589

Query: 704 SEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNG 763
           SEKLA+AF L+ TP G  IRV KNLR+C DCH + ++IS+I +REIIVRD +RFHHF+NG
Sbjct: 590 SEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNG 649

Query: 764 SCSCGGYW 771
            CSCG YW
Sbjct: 650 RCSCGDYW 657



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 207/422 (49%), Gaps = 33/422 (7%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF---- 154
            S ++ +C       LG+++H   I  G  SD F +N L+++Y+K G L+ A+ +F    
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 155 -KDI------------------------EHPD--IVSWNAVIAGCVLHEHNDWALKLFQQ 187
            K+I                        E P+  + +WNA++AG +  E N+  L LF +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M      P+ F   S L+ CAG+     GRQ+H  + K   + + +V   L  MY KCGS
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           + E   +   MP +N++AWN +I+G  QNG   E    +  M   G   D+ T  +V+ S
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            +    +G  +Q+HA  +K        +++SLI  Y +CG +E ++K+F E    D+V  
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHII 426
           +SMI AY   G G EA+ L+ +M+  ++  +     SLL AC++    E+G K   + + 
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEAL 485
           K+G          +V++  + GS+++A+     +P +  +++W  ++     H + + A 
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMAR 474

Query: 486 QM 487
           ++
Sbjct: 475 RI 476



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 80/509 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           +L++C S+  L LG Q+H +++ +G  SD+F++N L+ +Y+KCG                
Sbjct: 58  LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117

Query: 45  ---------------NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                          +++ +R++FD +PER+V +WN++ +  +  +F EE +  F  M  
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE 177

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  P+EF+L S++  CAG    + GR++HGY  K G++ ++   ++L  MY K G+L +
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGE 237

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
              + + +   ++V+WN +IAG   + + +  L  +  MK +   P+  T+ S + +C+ 
Sbjct: 238 GERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +     G+Q+H  +IK        V   L+ MY++CG ++ +  +F      +++ W+ +
Sbjct: 298 LATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSM 357

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+ +  +G  +EA  LF  M +E                                     
Sbjct: 358 IAAYGFHGRGVEAIDLFNQMEQE-----------------------------------KL 382

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIF-----KESSAVDLVACTSMITAYAQFGLGEEAL 384
           E++D    SL+ A   CG  E  +K F     K      L   T M+    ++G  EEA 
Sbjct: 383 EANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAE 442

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L   M    +  D     +LL+AC      E  +++   + +     D      L N++
Sbjct: 443 ALIRSM---PVKADVITWKTLLSACKIHKKTEMARRISEEVFRLD-PRDPVPYVLLSNIH 498

Query: 445 AKCGSIDDADRAFSEIPDRGI-----VSW 468
           A     DD       + DR +     +SW
Sbjct: 499 ASDKRWDDVSDVRKAMRDRKLKKEPGISW 527


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/741 (35%), Positives = 401/741 (54%), Gaps = 60/741 (8%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           NS +  YA+ G    +RR+FD +P++ +VSWNS+ + Y   +   EA   F +M      
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP----E 75

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
            N  S + +I+    +      RK    +     + ++ S  A+V  Y + G + +A  +
Sbjct: 76  RNTVSWNGLISGYVKNRMVSEARK----AFDTMPERNVVSWTAMVRGYVQEGLVSEAETL 131

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI--NPNMFTYTSALKACAGME 211
           F  +   ++VSW  ++ G +     D A  LF  M   ++    NM +       C    
Sbjct: 132 FWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMIS-----GYCQEGR 186

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
           L E  R+L   + +  +    I    ++  Y + G +D AR +F +MPEKN ++W  ++ 
Sbjct: 187 LAE-ARELFDEMPRRNV----ISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLM 241

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ Q G   EA+ LF  M                      +A+  C              
Sbjct: 242 GYTQGGRIEEASELFDAM--------------------PVKAVVAC-------------- 267

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
                N++I  +G+ G V  A ++F +    D    ++MI  Y + G   EAL L+  MQ
Sbjct: 268 -----NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQ 322

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              +  +     S+L+ CA+L++ + G+QVH  ++K  F SD F  + L+ MY KCG + 
Sbjct: 323 REGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLV 382

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A + F     + IV W+++I G AQHG  +EALQ+F +M   G+  + +T V VL AC+
Sbjct: 383 KARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACS 442

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           + G V E    FESM+ K+ ++P  EHYACM+D+LGRAG   +AM+L+  MP +A+A +W
Sbjct: 443 YTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIW 502

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GALLGA R + N+ + + AA+ L  +EP+ +  ++LLSNIYAS G W +VA++RR M+  
Sbjct: 503 GALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVK 562

Query: 632 KLKKEPGMSWIEVKDKVYTFTVG-DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
           K+ K PG SWIEV+ +V+ FT G    H     I   L+++  +L +AGY P     LHD
Sbjct: 563 KVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHD 622

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V+E EK + L HHSE+LAVAFGL+  P G  IRV KNLR+C DCH++ + I+KI  REII
Sbjct: 623 VDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREII 682

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           +RD NRFHHF++G CSC  YW
Sbjct: 683 LRDANRFHHFKDGFCSCRDYW 703



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 37/386 (9%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D     +++  Y + G   ++R LFD +P R+V+SW ++ S YV    ++ A   F+ M 
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP 229

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA---------NALVD 139
                 NE S ++M+      G             ++   S++F A         NA++ 
Sbjct: 230 ----EKNEVSWTAMLMGYTQGG-------------RIEEASELFDAMPVKAVVACNAMIL 272

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKSSEINPN 196
            + + G +  A  VF  I   D  +W+A+I    ++E   +   AL LF  M+   +  N
Sbjct: 273 GFGQNGEVAKARQVFDQIREKDDGTWSAMIK---VYERKGFEVEALNLFALMQREGVQSN 329

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             +  S L  CA +   + GRQ+H  L+K +  SD  V   L+ MY KCG + +AR IF 
Sbjct: 330 FPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFD 389

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
               K+++ WN +I+G+ Q+G   EA  +F  M   G+  D  T   VL + +    +  
Sbjct: 390 RFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKE 449

Query: 317 CKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMI 371
             ++  ++  K   E        ++D  G+ G V DA+ + +    E+ A+   A     
Sbjct: 450 GLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGAC 509

Query: 372 TAYAQFGLGEEALKLYLEMQDREINP 397
             +    L E A K  L+++ +   P
Sbjct: 510 RTHMNMNLAEVAAKKLLQLEPKNAGP 535



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 121/244 (49%), Gaps = 20/244 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S   L  G QVH  +V + FDSD FVA+ L+ MY KCG+ + +R++FD    + 
Sbjct: 336 VLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKD 395

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V WNS+ + Y     +EEA+  F EM  SG+  +  +   +++AC+ +G    G +I  
Sbjct: 396 IVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIF- 454

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
            S+K  Y  +  + +   +VD+  + G + DA+ + + +    D + W A++  C  H +
Sbjct: 455 ESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMN 514

Query: 178 NDW---ALKLFQQMKSSEINPNMFTYTSALKACAG-----------MELKELGRQLHCSL 223
            +    A K   Q++     P  +   S + A  G           M +K++ +   CS 
Sbjct: 515 MNLAEVAAKKLLQLEPKNAGP--YILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSW 572

Query: 224 IKME 227
           I++E
Sbjct: 573 IEVE 576



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 14/170 (8%)

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           S   A NS +  YA+ G I+ A R F E+PD+GIVSW++M+ G  Q+ R +EA  +F +M
Sbjct: 14  SVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM 73

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
            E     N ++   ++       +V+EA+  F++M ++  +      +  M+    + G 
Sbjct: 74  PER----NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVS-----WTAMVRGYVQEGL 124

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
             EA  L   MP + N   W  +LG     + ++     A  LF I P K
Sbjct: 125 VSEAETLFWQMP-EKNVVSWTVMLGGLIQVRRID----EARGLFDIMPVK 169


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/666 (37%), Positives = 384/666 (57%), Gaps = 15/666 (2%)

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H + IK G   + F  + LV++YAK G + +A  VF ++   ++V W  ++ G V +  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + A+++F  M  S   P+ FT + AL AC+ +E   LG+Q H  +IK  I  D  +G  
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L  +Y+K GS+D +   F    EK++I+W  +IS    NG       LF  M  E V  +
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             TL++VL   ++ Q+  +  QVH+LS K   ES+  I NSL+  Y KCG +++A  +F 
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 358 ESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLEMQDREINPDSFVCSSLL 406
                +L+   +MI  +AQ              G EAL +YL++      PD F  SS+L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
             C+ L+A EQG+Q+H   IK GF+SD   G +LV+MY KCGSI+ A +AF ++  R ++
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           SW++MI   A+HG+ + ALQ+F  M   G  PN IT V VL AC+HAG+V EA  +FE M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
           +K++ I+P+ +HY C++D+  R G+  EA +++  M  + N  +W  L+   R + N E+
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G +AAE L  ++P  + T+V+L N+Y SA  W++V+ VRR MK+ K+ K    S I +K 
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY----H 702
           +V++F   +R H  + E++  L+++ D     GY  +   ++ D EE E E+  +    +
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVY 601

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLAV FGL+ TP GA IRV K++ +C DCH   + +S   +R II++D  R H F N
Sbjct: 602 HSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVN 661

Query: 763 GSCSCG 768
           G CSC 
Sbjct: 662 GQCSCA 667



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/495 (32%), Positives = 262/495 (52%), Gaps = 23/495 (4%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VH  V+ TG   + FV + LV +YAKCG  +++R++FD +P R+VV W +L + YV    
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
            E AV  F +M+ SG  P+ F+LS  +NAC+      LG++ H + IK     D    NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L  +Y+K G+L+ +V  F++    D++SW  +I+ C  +      L+LF +M    + PN
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            FT TS L  C+ ++  +LG Q+H    K+  +S+  +   LV +Y KCG +DEA+ +F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 257 LMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
            M  KNLI WN +I+GH Q                EA  ++  + R G   D  TLS++L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
              +   A+   +Q+HA ++K+ F SD  +  +L+D Y KCG +E A K F + S   L+
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           + TSMIT++A+ G  + AL+L+ +M+     P+      +L AC++    ++  + +  I
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALE-YFEI 420

Query: 426 I----KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQH 478
           +    K   + D +    LV+M+ + G +D+A      +   P+  I  W  +I G   H
Sbjct: 421 MQKEYKIKPVMDHYG--CLVDMFVRLGRLDEAFDVIKRMDVEPNEFI--WLLLIAGCRNH 476

Query: 479 GRGKEALQMFGQMLE 493
           G  +       Q+L+
Sbjct: 477 GNEELGFYAAEQLLK 491



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 216/463 (46%), Gaps = 47/463 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+S + + LG Q H  ++      D  + N+L  +Y+K G+   S + F    E+ V
Sbjct: 88  LNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDV 147

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           +SW ++ S           +  F EM+   + PN+F+L+S+++ C+    S LG ++H  
Sbjct: 148 ISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSL 207

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV-------- 173
           S KLG++S++   N+LV +Y K G +++A  +F  +E+ ++++WNA+IAG          
Sbjct: 208 STKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKD 267

Query: 174 ---LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
                +    AL ++ ++  S   P++FT +S L  C+ +   E G Q+H   IK    S
Sbjct: 268 NFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLS 327

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           D +VG  LVDMY KCGS++ AR  F  M  + LI+W  +I+   ++G    A  LF  M 
Sbjct: 328 DVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMR 387

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
             G   +Q T   VL + +           HA  V  A E                 + E
Sbjct: 388 LAGFRPNQITFVGVLAACS-----------HAGMVDEALE-----------------YFE 419

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
              K +K    +D   C  ++  + + G  +EA  +   M   ++ P+ F+   L+  C 
Sbjct: 420 IMQKEYKIKPVMDHYGC--LVDMFVRLGRLDEAFDVIKRM---DVEPNEFIWLLLIAGCR 474

Query: 411 NLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDD 452
           N    E G      ++K    S +T+    L+NMY      +D
Sbjct: 475 NHGNEELGFYAAEQLLKLKPRSTETYV--VLLNMYISAERWED 515



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 157/295 (53%), Gaps = 19/295 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C++ +   LG+QVH +    G +S+  + NSLV +Y KCG   +++ LF+ +  ++
Sbjct: 188 VLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKN 247

Query: 61  VVSWNSLFSCYVHCDFL-----------EEAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
           +++WN++ + +     L            EA+  + ++  SG +P+ F+LSS++  C+  
Sbjct: 248 LITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRL 307

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
                G +IH  +IK G+ SD+    ALVDMY K G++E A   F D+    ++SW ++I
Sbjct: 308 AALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMI 367

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKME 227
                H  +  AL+LF+ M+ +   PN  T+   L AC  AGM  + L    +  +++ E
Sbjct: 368 TSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALE---YFEIMQKE 424

Query: 228 IKSDPIVG-VG-LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGD 279
            K  P++   G LVDM+ + G +DEA  +   M  E N   W ++I+G   +G +
Sbjct: 425 YKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNE 479



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C+    L  G Q+H   + +GF SD  V  +LV MY KCG+   +R+ F  +  R+
Sbjct: 300 ILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRT 359

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---DSLLGRK 117
           ++SW S+ + +      + A+  F++M L+G RPN+ +   ++ AC+ +G   ++L   +
Sbjct: 360 LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE 419

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWNAVIAGCVLH 175
           I     K+    D +    LVDM+ ++G L++A  V K  D+E P+   W  +IAGC  H
Sbjct: 420 IMQKEYKIKPVMDHYG--CLVDMFVRLGRLDEAFDVIKRMDVE-PNEFIWLLLIAGCRNH 476

Query: 176 EHNDWALKLFQQM 188
            + +      +Q+
Sbjct: 477 GNEELGFYAAEQL 489


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/653 (37%), Positives = 385/653 (58%), Gaps = 8/653 (1%)

Query: 126  GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
            G   ++ ++N L+DMY K      A  VF  +   ++VSW A+++G VL+   + +L LF
Sbjct: 399  GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458

Query: 186  QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
             +M    I PN FT+++ LKAC  +   E G Q+H   +K+  +    VG  LVDMY+KC
Sbjct: 459  TEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 518

Query: 246  GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG--FDQTTLST 303
            G ++EA  +F  M  ++LI+WN +I+G++  G    A + F  M    +    D+ TL++
Sbjct: 519  GRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTS 578

Query: 304  VLKSVASFQAIGVCKQVHALSVKTAFE--SDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +LK+ +S   I   KQ+H   V++ F   S   I  SL+D Y KCG++  A K F +   
Sbjct: 579  LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638

Query: 362  VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
              +++ +S+I  YAQ G   EA+ L+  +Q+     DSFV SS++   A+ +  +QGKQ+
Sbjct: 639  KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQM 698

Query: 422  HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
               ++K     +T   NSLV+MY KCG +D+A++ F+E+  + ++SW+ MI G  +HG G
Sbjct: 699  QALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLG 758

Query: 482  KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            K+A+ +F +ML   + P+ +  ++VL AC+H+G++ E +  F  + +  GI+P  EHYAC
Sbjct: 759  KKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYAC 818

Query: 542  MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
            ++D+LGRAG+ +EA  LVDTMP + N  +W  LL   R++ ++E+G+   ++L  I+ + 
Sbjct: 819  VVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKN 878

Query: 602  SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
             + +V++SN+Y  AG W+     R       L+KE GMSW+E++ +V+ F  G+ SH  +
Sbjct: 879  PANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLT 938

Query: 662  KEIYAKLDEVSDLLNKA-GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA---TP 717
              I   L EV   L +  GYV  ++ +LHD+++  KE+ L  HSEKLA+   L       
Sbjct: 939  LVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQ 998

Query: 718  PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
             G TIRV KNLR+CVDCH   + +SKI     +VRD  RFH F +G CSCG Y
Sbjct: 999  KGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 261/485 (53%), Gaps = 11/485 (2%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
            +N L+ MY KC   + + ++FD++PER+VVSW +L S +V    L  ++  F EM   G
Sbjct: 406 TSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQG 465

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           I PNEF+ S+ + AC        G +IHG+ +K+G++  +   N+LVDMY+K G + +A 
Sbjct: 466 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 525

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI--NPNMFTYTSALKACAG 209
            VF+ +    ++SWNA+IAG V   +   AL  F  M+ ++I   P+ FT TS LKAC+ 
Sbjct: 526 KVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSS 585

Query: 210 MELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
             +   G+Q+H  L++      S   +   LVD+Y KCG++  AR  F  + EK +I+W+
Sbjct: 586 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWS 645

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G+ Q G  +EA  LF  +       D   LS+++   A F  +   KQ+ AL VK 
Sbjct: 646 SLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKL 705

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
               +  + NSL+D Y KCG V++A K F E    D+++ T MIT Y + GLG++A+ ++
Sbjct: 706 PSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIF 765

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAGNSLVNMYAK 446
            +M    I PD     ++L+AC++    ++G+++   +++  G          +V++  +
Sbjct: 766 NKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGR 825

Query: 447 CGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHIT 502
            G + +A      +P +  V  W  ++     HG    GKE  ++  ++  DG  P +  
Sbjct: 826 AGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI--DGKNPANYV 883

Query: 503 LVSVL 507
           ++S L
Sbjct: 884 MMSNL 888



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 219/435 (50%), Gaps = 12/435 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC     L  GLQ+HG  +  GF+    V NSLV MY+KCG   ++ ++F  +  RS+
Sbjct: 477 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSL 536

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI--RPNEFSLSSMINACAGSGDSLLGRKIH 119
           +SWN++ + YVH  +   A+  F  M  + I  RP+EF+L+S++ AC+ +G    G++IH
Sbjct: 537 ISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIH 596

Query: 120 GYSIKLGY--DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           G+ ++ G+   S      +LVD+Y K GNL  A   F  I+   ++SW+++I G      
Sbjct: 597 GFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGD 656

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              A+ LF++++      + F  +S +   A   L + G+Q+   ++K+    +  V   
Sbjct: 657 FVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNS 716

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LVDMY KCG +DEA   F  M  K++I+W ++I+G+ ++G   +A S+F  M R  +  D
Sbjct: 717 LVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPD 776

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +     VL + +    I   +++ +  ++T   +        ++D  G+ G +++A  + 
Sbjct: 777 EVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLV 836

Query: 357 KESSAVDLVA----CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
                   V       S+   +    LG+E  K+ L +  +  NP ++V  S L   A  
Sbjct: 837 DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGK--NPANYVMMSNLYGQAGY 894

Query: 413 SAYEQGKQVHVHIIK 427
              EQG    +  IK
Sbjct: 895 WN-EQGNARELGSIK 908



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 4/275 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +LKAC+S   ++ G Q+HG +V +GF   S   +  SLV +Y KCGN   +R+ FD I E
Sbjct: 579 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++++SW+SL   Y       EA+  FK +     + + F LSS+I   A       G+++
Sbjct: 639 KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQM 698

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
               +KL    +   +N+LVDMY K G +++A   F +++  D++SW  +I G   H   
Sbjct: 699 QALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLG 758

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVG 237
             A+ +F +M    I P+   Y + L AC+   + + G +L   L++ + IK        
Sbjct: 759 KKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYAC 818

Query: 238 LVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVIS 271
           +VD+  + G + EA+ +   MP K N+  W  ++S
Sbjct: 819 VVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLS 853


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/658 (37%), Positives = 385/658 (58%), Gaps = 33/658 (5%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L  A+++F+ I+ P+++ WN +  G  L+  +  ALKL+  M S  + PN +++   LK+
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA--------------- 251
           CA  +    G+Q+H  ++K+    D  V   L+ MYA+ G +++A               
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 252 ----------------RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                           R +F  +  K++++WN +ISG+++     EA  L+  M +  V 
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D++T+ TV+ + A   +I + +Q+H+      F S+  IVN LID Y KCG VE A  +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F+  +  D+++  ++I  +    L +EAL L+ EM     +P+     S+L ACA+L A 
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 416 EQGKQVHVHIIKF--GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           + G+ +HV+I K   G  + +    SL++MYAKCG I+ A + F  +  R + SW+AMI 
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G A HG+   A  +F +M ++G+ P+ IT V +L AC+H+G++   +H F SM + + I 
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKIT 434

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY CMID+LG  G F+EA E++ TMP + +  +W +LL A +++ NVE+G+  A+ 
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQN 494

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  IEPE   ++VLLSNIYA+AG WD VAK+R  + D  +KK PG S IE+   V+ F +
Sbjct: 495 LIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFII 554

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD+ H R++EIY  L+E+  L+ + G+VP     L ++EE  KE  L HHSEKLA+AFGL
Sbjct: 555 GDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 614

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I+T PG  + + KNLR+C +CH + + ISKI  REII RD  R H  ++G  SC  YW
Sbjct: 615 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 240/502 (47%), Gaps = 75/502 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID------------ 48
           +LK+C   K L  G Q+HG V+  G+D D +V  SL+ MYA+ G   D            
Sbjct: 71  LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130

Query: 49  -------------------SRRLFDAIPERSVVSWNSLFSCYVH-CDFLEEAVCFFKEMV 88
                              +R+LFD I  + VVSWN++ S YV  C+F +EA+  +K+M+
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNF-KEALELYKDMM 189

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            + ++P+E ++ ++++ACA SG   LGR++H +    G+ S++   N L+D+Y+K G +E
Sbjct: 190 KTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVE 249

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKSSEINPNMFTYTSALK 205
            A  +F+ +   D++SWN +I G   H H +    AL LFQ+M  S  +PN  T  S L 
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGG---HTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306

Query: 206 ACAGMELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           ACA +   ++GR +H  + K    + +   +   L+DMYAKCG ++ A+ +F  M  ++L
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            +WN +I G   +G    A  LF  M + G+  D  T   +L + +    + + + +   
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIF-- 424

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
                  S DY +   ++ YG                         MI      GL +EA
Sbjct: 425 ----RSMSQDYKITPKLEHYG------------------------CMIDLLGHCGLFKEA 456

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
            ++   M    + PD  +  SLL AC   +  E G+    ++IK     +  +   L N+
Sbjct: 457 KEMIRTM---PMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIE-PENPGSYVLLSNI 512

Query: 444 YAKCGSIDDADRAFSEIPDRGI 465
           YA  G  D   +  + + D+GI
Sbjct: 513 YATAGRWDQVAKIRTLLNDKGI 534



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 220/468 (47%), Gaps = 47/468 (10%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F+ I E +++ WN++F  +        A+  +  M+  G+ PN +S   ++ +CA S  
Sbjct: 21  IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------ 159
            + G++IHG+ +KLGYD DM+   +L+ MYA+ G LEDA  VF    H            
Sbjct: 81  LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140

Query: 160 -------------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                               D+VSWNA+I+G V   +   AL+L++ M  + + P+  T 
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + + ACA     ELGRQLH  +      S+  +   L+D+Y+KCG ++ A  +F  + +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++I+WN +I GH       EA  LF  M R G   +  T+ +VL + A   AI + + +
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320

Query: 321 HALSVK--TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           H    K      +   ++ SLID Y KCG +E A ++F       L +  +MI  +A  G
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG 380

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
               A  L+ +M+   I+PD      LL+AC++    + G+ +      F  MS  +   
Sbjct: 381 KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI------FRSMSQDYKIT 434

Query: 439 S-------LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
                   ++++   CG   +A      +P +   V W +++     H
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/574 (40%), Positives = 351/574 (61%), Gaps = 2/574 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y + L AC        G+++H  +IK        +   L+  Y KC  +++AR +   MP
Sbjct: 55  YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           EKN+++W  +IS + Q G   EA ++F  M R     ++ T +TVL S      +G+ KQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +H L VK  ++S  ++ +SL+D Y K G +++A +IF+     D+V+CT++I  YAQ GL
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL+++  +    ++P+    +SLL A + L+  + GKQ H H+++          NS
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML-EDGVLP 498
           L++MY+KCG++  A R F  +P+R  +SW+AM+ G ++HG G+E L++F  M  E  V P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           + +TL++VL  C+H  +     + F+ M   ++G +P  EHY C++D+LGRAG+  EA E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MP +  A V G+LLGA R++ +V++G+     L  IEPE +  +V+LSN+YASAG 
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W +V  VR  M    + KEPG SWI+ +  ++ F   DR+H R +E+ AK+ E+S  + +
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGYVP +   L+DV+E +KE++L  HSEKLA+ FGLIAT  G  IRV KNLRICVDCH  
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +  SK+  RE+ +RD NRFH   +G CSCG YW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 241/483 (49%), Gaps = 57/483 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC  K+ L  G +VH  ++ T +    ++   L++ Y KC    D+R++ D +PE++
Sbjct: 58  LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y       EA+  F EM+ S  +PNEF+ ++++ +C  +    LG++IHG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K  YDS +F  ++L+DMYAK G +++A  +F+ +   D+VS  A+IAG      ++ 
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++F ++ S  ++PN  TY S L A +G+ L + G+Q HC +++ E+    ++   L+D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MY+KCG++  AR +F  MPE+  I+WN ++ G+ ++G   E   LF  M  E  V  D  
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357

Query: 300 TLSTVLKSVASFQ----AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           TL  VL   +  +     + +   + A    T   ++ Y    ++D  G+ G +++A + 
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY--GCIVDMLGRAGRIDEAFEF 415

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            K   +                                   P + V  SLL AC    + 
Sbjct: 416 IKRMPS----------------------------------KPTAGVLGSLLGACRVHLSV 441

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDAD--------RAFSEIPDRGI 465
           + G+ V   +I+   +    AGN ++  N+YA  G   D +        +A ++ P R  
Sbjct: 442 DIGESVGRRLIE---IEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR-- 496

Query: 466 VSW 468
            SW
Sbjct: 497 -SW 498



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 199/390 (51%), Gaps = 6/390 (1%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA+    EM + G         +++NAC        G+++H + IK  Y    +    
Sbjct: 36  LQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTR 92

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+  Y K   LEDA  V  ++   ++VSW A+I+      H+  AL +F +M  S+  PN
Sbjct: 93  LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            FT+ + L +C       LG+Q+H  ++K    S   VG  L+DMYAK G + EAR IF 
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE 212

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +PE+++++   +I+G+ Q G D EA  +F  ++ EG+  +  T +++L +++    +  
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            KQ H   ++        + NSLID Y KCG++  A ++F        ++  +M+  Y++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332

Query: 377 FGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSD 433
            GLG E L+L+  M+D + + PD+    ++L+ C++    + G  +   ++  ++G    
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           T     +V+M  + G ID+A      +P +
Sbjct: 393 TEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/663 (36%), Positives = 367/663 (55%), Gaps = 68/663 (10%)

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H    +++F  M +  I P+     + +K CA +   + G+Q+HC  +   +  D +V  
Sbjct: 54  HFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLS 113

Query: 237 GLVDMYAKCGSMDEARMIFHLMP-----------------------------------EK 261
            L+ MY +   + +AR +F  +P                                   E 
Sbjct: 114 SLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVEL 173

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           NL++WN +ISG  ++G  ++A  +F  M+ EG+  D T++S+VL +V       +  Q+H
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIH 233

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKC-------------------------------GHVE 350
              +K     D ++V++LID YGKC                               G V+
Sbjct: 234 CYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVD 293

Query: 351 DAVKIFKESSAVDL--VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +A+++FK+   +DL  V+ TSMI + +Q G   EAL+L+ EMQ   + P+S     LL A
Sbjct: 294 NALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPA 353

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C N++A   GK  H   ++ G  +D + G++L++MYAKCG +  +   F  +P+R +VSW
Sbjct: 354 CGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSW 413

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           ++++ G A HG+  EA+ +F  M   G  P+H++   VL AC   GL  E   +F+SM +
Sbjct: 414 NSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
             G++   EHY+CM+ +LGR+G+ +EA  ++  MPF+ ++ VWGALL + R++  V++G+
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGE 533

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
            AA+ +F +EP     ++LLSNIYAS  MW  V  VR  M+   LKK PG SWIE+K+KV
Sbjct: 534 IAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKV 593

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
           +    GD SH +  +I  KL +++  + K+GYVP  +  L DVEE +KEQ+L  HSEKLA
Sbjct: 594 HMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLA 653

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           V  GL+ T PG  ++V KNLRIC DCH   +FIS    REI VRD NRFH F+ G CSCG
Sbjct: 654 VVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCG 713

Query: 769 GYW 771
            YW
Sbjct: 714 DYW 716



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 216/477 (45%), Gaps = 81/477 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
           V+K C +   L  G Q+H   + +G   D  V +SL+ MY +  +  D+R +FD +P   
Sbjct: 80  VIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPG 139

Query: 58  --------------------------------ERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
                                           E ++VSWN + S +       +AV  F+
Sbjct: 140 VVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQ 199

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV- 144
            M L G++P+  S+SS++ A       L+G +IH Y IK G   D F  +AL+DMY K  
Sbjct: 200 NMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCA 259

Query: 145 ------------------------------GNLEDAVAVFKDIEHPD--IVSWNAVIAGC 172
                                         G +++A+ VFK  +  D  +VSW ++IA C
Sbjct: 260 CASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASC 319

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             +  +  AL+LF++M+   + PN  T    L AC  +     G+  HC  ++  I +D 
Sbjct: 320 SQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDV 379

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  L+DMYAKCG M  +R+ F +MP +NL++WN +++G+  +G   EA ++F  M R 
Sbjct: 380 YVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRC 439

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           G   D  + + VL +       G+ ++      ++S     E+     + ++   G+ G 
Sbjct: 440 GQKPDHVSFTCVLSACTQG---GLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGR 496

Query: 349 VEDAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
           +E+A  + K    E  +    A  S    + +  LGE A K   E++ R  NP +++
Sbjct: 497 LEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPR--NPGNYI 551



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 194/477 (40%), Gaps = 90/477 (18%)

Query: 84  FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           F  M+  GI P+   L ++I  CA       G+++H +++  G   D    ++L+ MY +
Sbjct: 62  FSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQ 121

Query: 144 VGNLEDAVAVFKDIEHP-----------------------------------DIVSWNAV 168
             +L+DA  VF  +  P                                   ++VSWN +
Sbjct: 122 FDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGM 181

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           I+G         A+ +FQ M    + P+  + +S L A   +++  +G Q+HC +IK  +
Sbjct: 182 ISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGL 241

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK--------------------------- 261
             D  V   L+DMY KC    E   +F+ M E                            
Sbjct: 242 GPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQ 301

Query: 262 ------NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
                 N+++W  +I+   QNG DMEA  LF  M  EGV  +  T+  +L +  +  A+ 
Sbjct: 302 FKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALL 361

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             K  H  S++    +D Y+ ++LID Y KCG +  +   F      +LV+  S++  YA
Sbjct: 362 HGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYA 421

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G   EA+ ++  MQ     PD    + +L+AC      E+G           F  D+ 
Sbjct: 422 MHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEG----------WFYFDSM 471

Query: 436 AGN-----------SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR 480
           + N            +V +  + G +++A     ++P +     W A++     H R
Sbjct: 472 SRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNR 528


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/696 (34%), Positives = 416/696 (59%), Gaps = 5/696 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L A  S      G Q+H   V  G D++ FV +SL+ +Y K G   D++++FD   E++
Sbjct: 333  MLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 392

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V WN++   +V  D  EE +  F+ M  + +  ++F+  S++ AC       +GR++H 
Sbjct: 393  IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHC 452

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +IK   D+D+F ANA++DMY+K+G ++ A A+F  I   D VSWNA+I G   +E  + 
Sbjct: 453  ITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEE 512

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A+ + ++MK   I P+  ++ +A+ AC+ +   E G+Q+HC+ IK  + S+  VG  L+D
Sbjct: 513  AVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLID 572

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            +Y+K G ++ +R +   +   +++  N +I+G +QN  + EA  LF  + ++G      T
Sbjct: 573  LYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFT 632

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-SLIDAYGKCGHVEDAVKIFKE- 358
             +++L       +  + KQVH+ ++K+A  + D  +  SL+  Y KC  +EDA K+  E 
Sbjct: 633  FASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEV 692

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +LV  T+ I+ YAQ G  +++L ++  M+  ++  D    +S+L AC+ ++A   G
Sbjct: 693  PDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDG 752

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
            K++H  IIK GF+S   A ++L++MY+KCG +  +   F E+ ++  I+ W++MI G A+
Sbjct: 753  KEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAK 812

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G   EAL +F +M E  + P+ +TL+ VL AC+HAGL++E ++ F+SM + +GI P  +
Sbjct: 813  NGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVD 872

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            HYAC+ID+LGR G  QEA E++D +PF+A+  +W   L A +++K+ E G+ AA+ L  +
Sbjct: 873  HYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEM 932

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP++SST+V LS+++A+AG W      R  M++  + K PG SWI V +K   F V D  
Sbjct: 933  EPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTH 992

Query: 658  HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEE 693
            H  +  IY  LD+++ ++NK   +   E DL  + E
Sbjct: 993  HPDTLGIYKMLDDLTGMMNKDDRIE--EYDLRSLSE 1026



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 292/553 (52%), Gaps = 3/553 (0%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           G   D+    +++   A  G   D+R L   I   S V+WN++ S Y       E    +
Sbjct: 256 GSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLY 315

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           K+M   G+ P   + +SM++A A       G++IH  ++K G D+++F  ++L+++Y K 
Sbjct: 316 KDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKH 375

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G + DA  VF      +IV WNA++ G V ++  +  +++FQ M+ +++  + FT+ S L
Sbjct: 376 GCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVL 435

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            AC  ++  ++GRQ+HC  IK  + +D  V   ++DMY+K G++D A+ +F L+P K+ +
Sbjct: 436 GACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSV 495

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +WN +I G   N  + EA  +   M   G+  D+ + +T + + ++ +A    KQ+H  S
Sbjct: 496 SWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCAS 555

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K    S+  + +SLID Y K G VE + K+     A  +V   ++IT   Q    +EA+
Sbjct: 556 IKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAI 615

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNM 443
           +L+ ++      P +F  +S+L+ C    +   GKQVH + +K   ++ DT  G SLV +
Sbjct: 616 ELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGI 675

Query: 444 YAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           Y KC  ++DA++  +E+PD + +V W+A I G AQ+G   ++L MF +M    V  +  T
Sbjct: 676 YLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEAT 735

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
             SVL AC+    + + K     +  K G    +   + ++D+  + G    + E+   +
Sbjct: 736 FASVLKACSEIAALTDGK-EIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKEL 794

Query: 563 PFQANASVWGALL 575
             + N   W +++
Sbjct: 795 KNKQNIMPWNSMI 807



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 159/583 (27%), Positives = 282/583 (48%), Gaps = 51/583 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G QVH  V+ +GF S  F    LV MYAKC    D+RR+FD I    
Sbjct: 166 VLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPD 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + W S+ + Y      ++A+  F  M   G  P++ +  ++I+                
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIIST--------------- 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                A +G L DA  + K I+ P  V+WNAVI+          
Sbjct: 271 --------------------LASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
              L++ MK   + P   T+ S L A A M   + G+Q+H + +K  + ++  VG  L++
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y K G + +A+ +F    EKN++ WN ++ G +QN    E   +F +M R  +  D  T
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFT 430

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL +  +  ++ + +QVH +++K + ++D ++ N+++D Y K G ++ A  +F    
Sbjct: 431 FVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIP 490

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+  ++I   A     EEA+ +   M+   I PD    ++ +NAC+N+ A E GKQ
Sbjct: 491 GKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQ 550

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   IK+   S+   G+SL+++Y+K G ++ + +  + +    +V  +A+I GL Q+ R
Sbjct: 551 IHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNR 610

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNH--AGLVAEAKHHFE------SMEKKFGI 532
             EA+++F Q+L+DG  P++ T  S+L  C    + ++ +  H +       + +   GI
Sbjct: 611 EDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGI 670

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             +  +  C +         ++A +L+  +P   N   W A +
Sbjct: 671 SLVGIYLKCKL--------LEDANKLLAEVPDHKNLVEWTATI 705



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 269/547 (49%), Gaps = 41/547 (7%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD--AIPERSVVSWNSLFSCYVHC 74
           +H  V+  G      + ++LV +Y + G    + R          S  + +S+ SC+   
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 75  DFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
               + +  F+ +  S G  P++F L+ +++AC+  G    GR++H   +K G+ S  F 
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
              LVDMYAK   ++DA  VF  I  PD + W ++IAG         AL LF +M+    
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+  TY + +   A M                                   G + +AR 
Sbjct: 258 APDQVTYVTIISTLASM-----------------------------------GRLSDART 282

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +   +   + +AWN VIS + Q+G + E   L+  M R+G+   ++T +++L + AS  A
Sbjct: 283 LLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTA 342

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
               +Q+HA +VK   +++ ++ +SLI+ Y K G + DA K+F  S+  ++V   +M+  
Sbjct: 343 FDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYG 402

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           + Q  L EE ++++  M+  ++  D F   S+L AC NL + + G+QVH   IK    +D
Sbjct: 403 FVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDAD 462

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F  N++++MY+K G+ID A   FS IP +  VSW+A+I GLA +   +EA+ M  +M  
Sbjct: 463 LFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKC 522

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            G+ P+ ++  + + AC++       K  H  S+  K+ +       + +ID+  + G  
Sbjct: 523 YGIAPDEVSFATAINACSNIRATETGKQIHCASI--KYNVCSNHAVGSSLIDLYSKFGDV 580

Query: 553 QEAMELV 559
           + + +++
Sbjct: 581 ESSRKVL 587



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 164/358 (45%), Gaps = 14/358 (3%)

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAY 374
           C  +HA  ++        + ++L+D YG+ G V  A +       +     A +S+++ +
Sbjct: 75  CGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCH 134

Query: 375 AQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           A+ G   + L  +  ++      PD F  + +L+AC+ L A EQG+QVH  ++K GF S 
Sbjct: 135 ARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSS 194

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F    LV+MYAKC  + DA R F  I     + W++MI G  + GR ++AL +F +M +
Sbjct: 195 AFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEK 254

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G  P+ +T V+++      G +++A+   + ++      P    +  +I    ++G   
Sbjct: 255 MGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAVISSYSQSGLES 309

Query: 554 EAMELVDTMPFQA---NASVWGALLGAARIYKNVEVGQ--HAAEMLFAIEPEKSSTHVLL 608
           E   L   M  Q      S + ++L AA      + GQ  HAA +   ++        L+
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLI 369

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
            N+Y   G   +  KV  F  +  +     M +  V++ +   T+    + R  ++ A
Sbjct: 370 -NLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEA 426


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/711 (36%), Positives = 407/711 (57%), Gaps = 13/711 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--R 59
           L  CT  K++  G  +H  ++ TG  S  +V N+ + +YAK  +   +  LFD+I +  +
Sbjct: 18  LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77

Query: 60  SVVSWNSLFSCYVHCDFLEE---AVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLG 115
             VSWNSL + +           A+  F+ M+ +  + PN  +L+ + +A +   D + G
Sbjct: 78  DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++ H  ++K G   D++  ++L++MY K G + DA  +F  +   + VSW  +I+G    
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASS 197

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +  D A+++F+ M+  E   N F  TS L A         GRQ+H   IK  + +   V 
Sbjct: 198 DIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVA 257

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LV MYAKCGS+D+A   F    +KN I W+ +++G+ Q G   +A  LF  M+  GV 
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             + TL  V+ + +   A+   KQ+H+ + K  F    Y++++++D Y KCG + DA K 
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F+     D+V  TS+IT Y Q G  E  L LY +MQ   + P+    +S+L AC++L+A 
Sbjct: 378 FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL 437

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           +QGKQ+H  IIK+GF  +   G++L  MY KCGS+DD    F  +P R ++SW+AMI GL
Sbjct: 438 DQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGL 497

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           +Q+G G +AL++F +ML +G+ P+ +T V++L AC+H GLV     +F+ M  +F I PM
Sbjct: 498 SQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPM 557

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYACM+DIL RAGK  EA E +++        +W  LLGA + ++N E+G +A E L 
Sbjct: 558 VEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLV 617

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +   +SS +VLLS+IY + G  +NV +VRR MK   + KEPG SWIE+K  V+ F VGD
Sbjct: 618 ELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGD 677

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVET-------DLHDVEESEKEQL 699
             H +  EI  +L+ ++ L+   GY P+++        +L D E S++ Q+
Sbjct: 678 NQHPQVDEIRLELELLTKLMIDEGYQPLLDRLPETVIDNLTDQEGSDEIQI 728



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/486 (32%), Positives = 262/486 (53%), Gaps = 14/486 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  A ++  D+  G Q H + V TG   D +V +SL+ MY K G   D+R+LFD +PER+
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERN 183

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ S Y   D  ++AV  F+ M       NEF+L+S+++A         GR++H 
Sbjct: 184 TVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS 243

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK G  + +  ANALV MYAK G+L+DAV  F+     + ++W+A++ G      +D 
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF +M SS + P+ FT    + AC+ +     G+Q+H    K+       V   +VD
Sbjct: 304 ALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVD 363

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +AR  F  + + +++ W  +I+G++QNG      +L+  M  E V  ++ T
Sbjct: 364 MYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELT 423

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL++ +S  A+   KQ+HA  +K  F+ +  I ++L   Y KCG ++D   IF    
Sbjct: 424 MASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP 483

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           + D+++  +MI+  +Q G G +AL+L+ +M    I PD     +LL+AC+++   ++G +
Sbjct: 484 SRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWE 543

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYA-------KCGSIDDADRAF-SEIPDRGIVSWSAMI 472
                  F  M D F    +V  YA       + G +++A     S   D G+  W  ++
Sbjct: 544 Y------FKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILL 597

Query: 473 GGLAQH 478
           G    H
Sbjct: 598 GACKNH 603


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/744 (35%), Positives = 402/744 (54%), Gaps = 61/744 (8%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
            AN  +   ++ G   ++R+LFD+   +S+ SWNS+ + Y       +A   F EM    
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP--- 75

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
                                               D ++ S N LV  Y K G +++A 
Sbjct: 76  ------------------------------------DRNIISWNGLVSGYMKNGEIDEAR 99

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   ++VSW A++ G V +   D A  LF +M       N  ++T  L     + 
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVML-----IG 150

Query: 212 LKELGR-QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
             + GR    C L +M    D I    ++    K G +DEAR IF  M E+++I W  ++
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV-HALSVKTAF 329
           +G+ QN    +A  +F  M  +     + + +++L        I   +++   + VK   
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI 266

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                  N++I   G+ G +  A ++F      +  +  ++I  + + G   EAL L++ 
Sbjct: 267 A-----CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           MQ + + P      S+L+ CA+L++   GKQVH  +++  F  D +  + L+ MY KCG 
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLC 508
           +  +   F   P + I+ W+++I G A HG G+EAL++F +M L     PN +T V+ L 
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC++AG+V E    +ESME  FG++P+  HYACM+D+LGRAG+F EAME++D+M  + +A
Sbjct: 442 ACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDA 501

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           +VWG+LLGA R +  ++V +  A+ L  IEPE S T++LLSN+YAS G W +VA++R+ M
Sbjct: 502 AVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLM 561

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           K   ++K PG SW EV++KV+ FT G   SH   + I   LDE+  LL +AGY P     
Sbjct: 562 KTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYA 621

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           LHDV+E EK   L +HSE+LAVA+ L+    G  IRV KNLR+C DCHT+ + ISK+  R
Sbjct: 622 LHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKER 681

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EII+RD NRFHHFRNG CSC  YW
Sbjct: 682 EIILRDANRFHHFRNGECSCKDYW 705



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 204/493 (41%), Gaps = 74/493 (15%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D     S++    K G   ++R +FD + ERSV++W ++ + Y   + +++A   F  
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M        E S +SM+     +G      ++     ++     + + NA++    + G 
Sbjct: 229 MP----EKTEVSWTSMLMGYVQNGRIEDAEEL----FEVMPVKPVIACNAMISGLGQKGE 280

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKSSEINPNMFTYTSA 203
           +  A  VF  ++  +  SW  VI    +HE N +   AL LF  M+   + P   T  S 
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIK---IHERNGFELEALDLFILMQKQGVRPTFPTLISI 337

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L  CA +     G+Q+H  L++ +   D  V   L+ MY KCG + ++++IF   P K++
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           I WN +ISG+  +G   EA  +F  M   G        ST    V     +  C      
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSG--------STKPNEVTFVATLSAC------ 443

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS-----MITAYAQFG 378
                             +Y   G VE+ +KI++   +V  V   +     M+    + G
Sbjct: 444 ------------------SYA--GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAG 437
              EA+++   M    + PD+ V  SLL AC   S  +  +     +I+     S T+  
Sbjct: 484 RFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI- 539

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM--------IGGLAQHGRGKEA 484
             L NMYA  G   D       +  R +      SW+ +         GG+  H   +  
Sbjct: 540 -LLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESI 598

Query: 485 LQMFGQMLEDGVL 497
           L++  ++  DG+L
Sbjct: 599 LKILDEL--DGLL 609



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 12/234 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S   L  G QVH  +V   FD D +VA+ L+ MY KCG  + S+ +FD  P + 
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++ WNS+ S Y      EEA+  F EM LSG  +PNE +  + ++AC+ +G    G KI+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456

Query: 120 GYSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
             S++  +     +A+   +VDM  + G   +A+ +   +   PD   W +++  C  H 
Sbjct: 457 E-SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515

Query: 177 HNDWALKLFQQMKSSEINP-NMFTYT--SALKACAGM--ELKELGRQLHCSLIK 225
             D A   F   K  EI P N  TY   S + A  G   ++ EL + +   L++
Sbjct: 516 QLDVA--EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/715 (36%), Positives = 389/715 (54%), Gaps = 39/715 (5%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDA 150
           + N  ++  +I+ CA        +++H + ++ G   D  SA  L    A     +L+ A
Sbjct: 27  KSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYA 83

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAG 209
             VF  I  P++ +WN +I            L +F QM   S+  PN +T+   +KA   
Sbjct: 84  CKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATE 143

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +     G+ +H  ++K    SD  +   L+  Y+  G +D A ++F  + EK++++WN +
Sbjct: 144 VSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSM 203

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG +Q G   EA  LF  M  E    ++ T+  VL + A    +   +       +   
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGI 263

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA-------------- 375
           + +  + N+++D Y KCG +EDA ++F +    D+V+ T+MI  YA              
Sbjct: 264 DINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDV 323

Query: 376 -----------------QFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQ 417
                            Q G  +EAL ++ E+Q ++   P+    +S L ACA L A + 
Sbjct: 324 MPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDL 383

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G  +HV+I K G   +     SL++MY+KCG ++ A   F  +  R +  WSAMI GLA 
Sbjct: 384 GGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG G+ A+ +F +M E  V PN +T  ++LCAC+H+GLV E +  F  M   +G+ P  +
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSK 503

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HYACM+DILGRAG  +EA+EL++ MP   +ASVWGALLGA RIY NVE+ + A   L   
Sbjct: 504 HYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLET 563

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +      +VLLSNIYA AG WD V+++R+ MK + L+KEPG S IEV   ++ F VGD S
Sbjct: 564 DSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNS 623

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIAT 716
           H  S EIY+KLDE+   +   GYV      L  VEE   KE  L  HSEKLA+A+GLI  
Sbjct: 624 HPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRM 683

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            P   IR+ KNLR+C DCH+  + ISK+ +R+I++RD  RFHHF  G+CSC  YW
Sbjct: 684 EPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 256/530 (48%), Gaps = 40/530 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA-KCGNFID-SRRLFDAIPE 58
           ++  C +KK L    Q+H  ++ TG   D   A  L    A    + +D + ++FD IP 
Sbjct: 36  LIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPR 92

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR-PNEFSLSSMINACAGSGDSLLGRK 117
            ++ +WN+L   +       + +  F +M+    R PN ++   +I A       L G+ 
Sbjct: 93  PNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQA 152

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IHG  +K  + SD+F +N+L+  Y+ +G+L+ A  VF  I   DIVSWN++I+G V    
Sbjct: 153 IHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGS 212

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + AL+LF++MK     PN  T    L ACA     E GR     + +  I  + I+   
Sbjct: 213 PEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNA 272

Query: 238 LVDMYAKCGSM-------------------------------DEARMIFHLMPEKNLIAW 266
           ++DMY KCGS+                               D AR +F +MP +++ AW
Sbjct: 273 MLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAW 332

Query: 267 NIVISGHLQNGGDMEAASLFPWM-YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           N +IS + QNG   EA ++F  +   +    ++ TL++ L + A   A+ +   +H    
Sbjct: 333 NALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIK 392

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   + + +I  SLID Y KCGH+E A+++F      D+   ++MI   A  G G  A+ 
Sbjct: 393 KQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAID 452

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMY 444
           L+ +MQ+ ++ P++   ++LL AC++    ++G+     +   +G +  +     +V++ 
Sbjct: 453 LFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDIL 512

Query: 445 AKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE 493
            + G +++A     ++P     S W A++G    +G  + A     ++LE
Sbjct: 513 GRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLE 562



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 216/487 (44%), Gaps = 66/487 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KA T    L  G  +HG+V+   F SD F++NSL+  Y+  G+   +  +F  I E+ 
Sbjct: 137 VIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKD 196

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+ S +V     EEA+  FK M +   RPN  ++  +++ACA   D   GR    
Sbjct: 197 IVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACD 256

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G D ++  +NA++DMY K G+LEDA  +F  +E  DIVSW  +I G       D 
Sbjct: 257 YIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDA 316

Query: 181 ALKLFQQMKSSEIN--------------------------------PNMFTYTSALKACA 208
           A ++F  M   +I                                 PN  T  S L ACA
Sbjct: 317 ARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACA 376

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +LG  +H  + K  IK +  +   L+DMY+KCG +++A  +F+ +  +++  W+ 
Sbjct: 377 QLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSA 436

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I+G   +G    A  LF  M    V  +  T + +L           C   H+  V   
Sbjct: 437 MIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLL-----------CACSHSGLV--- 482

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            +      N +   YG    V    K +         AC  M+    + G  EEA++L  
Sbjct: 483 -DEGRLFFNQMRPVYG----VVPGSKHY---------AC--MVDILGRAGCLEEAVELIE 526

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M    I P + V  +LL AC      E  +     +++    ++  A   L N+YAK G
Sbjct: 527 KM---PIVPSASVWGALLGACRIYGNVELAEMACSRLLETD-SNNHGAYVLLSNIYAKAG 582

Query: 449 SIDDADR 455
             D   R
Sbjct: 583 KWDCVSR 589


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/712 (34%), Positives = 417/712 (58%), Gaps = 27/712 (3%)

Query: 79  EAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALV 138
           +A+  + EM   GI  ++F ++S++ AC        GR++H + I  G+ +D+    AL+
Sbjct: 13  QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72

Query: 139 DMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
            MYAK G+L+DA  VF+ +E  D+ +W+++IA        + A+ L+++M +  + PN+ 
Sbjct: 73  QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           T+  AL  CA +     GR +H  ++  ++  D ++   L++MY KC  M EAR +F  M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVC 317
             +N+ ++  +IS ++Q G   EA  LF  M + E +  +  T +T+L +V     +   
Sbjct: 193 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 252

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           ++VH       F+++  + N+L+  YGKCG   +A K+F   +A ++++ TSMI AYAQ 
Sbjct: 253 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 312

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  +EAL L+  M   ++ P     SS LNACA L A ++G+++H  +++    S     
Sbjct: 313 GNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME- 368

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            SL++MYA+CGS+DDA R F+ +  R   S +AMI    QHGR K+AL+++ +M ++G+ 
Sbjct: 369 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIP 428

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            + IT VSVL AC+H  LVA+ +   +S+    G+ P+ EHY CM+D+LGR+G+  +A E
Sbjct: 429 ADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEE 488

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
           LV+TMP+QA+A  W  LL   + + +++ G+ AA  +F + P ++  +V LSN+YA+A  
Sbjct: 489 LVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKR 548

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS-------KEIYAKLDE 670
           +D+  +VR+ M++  + +   +S+IE+ ++++ FT G R   +        + + + L E
Sbjct: 549 FDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVE 608

Query: 671 VSDLLNKAGYVPMVETDLHDV--------EESEKEQLLYHHSEKLAVAFGLIATP---PG 719
           + + + +AGYVP    D  +V         E EK++ L  HSE+LA+A+GLIA       
Sbjct: 609 LLEPMKQAGYVP----DTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDS 664

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +RV  + R+C  CH++ + +S I  + I VRD +RFHHF  G+CSCG +W
Sbjct: 665 RPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 275/545 (50%), Gaps = 14/545 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ ACT  + L  G ++H  ++ TGF +D  +  +L+ MYAKCG+  D++R+F+ +  + 
Sbjct: 36  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +W+S+ + Y      E AV  ++ M+  G+ PN  + +  +  CA       GR IH 
Sbjct: 96  LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +      D    ++L++MY K   + +A  VF+ ++  ++ S+ A+I+  V    +  
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF +M   E I PN +T+ + L A  G+   E GR++H  L      ++ +V   LV
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 275

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY KCGS  EAR +F  M  +N+I+W  +I+ + Q+G   EA +LF  M  E  G    
Sbjct: 276 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSG---V 332

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           + S+ L + A   A+   +++H   V+    S   +  SL+  Y +CG ++DA ++F   
Sbjct: 333 SFSSALNACALLGALDEGREIHHRVVEANLASPQ-METSLLSMYARCGSLDDARRVFNRM 391

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D  +C +MI A+ Q G  ++AL++Y +M+   I  D     S+L AC++ S     +
Sbjct: 392 KTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCR 451

Query: 420 Q-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQ 477
             +   ++  G +        +V++  + G + DA+     +P +   V+W  ++ G  +
Sbjct: 452 DFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKR 511

Query: 478 HG---RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
           HG   RG+ A +   ++     LP ++ L ++  A   A    +A+   + ME++   +P
Sbjct: 512 HGDLDRGERAARKVFELAPAETLP-YVFLSNMYAA---AKRFDDARRVRKEMEERGVTRP 567

Query: 535 MQEHY 539
           +   Y
Sbjct: 568 VAVSY 572



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 222/429 (51%), Gaps = 17/429 (3%)

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +IA CV       AL+L+ +M+   I  + F  TS + AC  ++  E GR+LH  LI   
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
            ++D  +   L+ MYAKCGS+D+A+ +F  M  K+L AW+ +I+ + + G    A  L+ 
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M  EGV  +  T +  L   AS   +   + +H   + +    DD + +SL++ Y KC 
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLL 406
            + +A K+F+   A ++ + T+MI+AY Q G   EAL+L+  M   E I P+++  +++L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
            A   L   E+G++VH H+   GF ++    N+LV MY KCGS  +A + F  +  R ++
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFES 525
           SW++MI   AQHG  +EAL +F +M    V P+ ++  S L AC   G + E +  H   
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM----PFQANASVW-----GALLG 576
           +E       M+     ++ +  R G   +A  + + M     F  NA +      G    
Sbjct: 358 VEANLASPQME---TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 414

Query: 577 AARIYKNVE 585
           A RIY+ +E
Sbjct: 415 ALRIYRKME 423


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 358/603 (59%), Gaps = 38/603 (6%)

Query: 203 ALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA--KCGSMDEARMIFHLMP 259
            L +C+ M ELK    Q H  +I++ + +D      ++   A  K G ++ A  +F  +P
Sbjct: 26  GLDSCSTMAELK----QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIP 81

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
             +   +N +  G+L+         ++  M  + V  ++ T   ++++     AI   KQ
Sbjct: 82  HPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQ 141

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           +HA  +K  F +D + +N+LI  Y     +E A ++F      D+V+ TS+IT Y+Q+G 
Sbjct: 142 IHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGF 201

Query: 380 GE-------------------------------EALKLYLEMQDREINPDSFVCSSLLNA 408
            +                               EA  L+  M+   +  D FV +S+L+A
Sbjct: 202 VDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 261

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C  L A EQGK +H +I K G   D+    ++++MY KCG ++ A   F+E+P +GI SW
Sbjct: 262 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 321

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
           + MIGGLA HG+G+ A+++F +M  + V P+ IT V+VL AC H+GLV E KH+F+ M +
Sbjct: 322 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 381

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
             G++P  EH+ CM+D+LGRAG  +EA +L++ MP   +A V GAL+GA RI+ N E+G+
Sbjct: 382 VLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGE 441

Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
              + +  +EP  S  +VLL+N+YASAG W++VAKVR+ M D  +KK PG S IE +  V
Sbjct: 442 QIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGV 501

Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
             F  G R+H ++KEIYAKLDE+ + +   GYVP  +  LHD++E EKE  LY+HSEKLA
Sbjct: 502 DEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLA 561

Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           +AFGL+ T PG T+R+ KNLRIC DCH + + ISK+  REII+RD NRFHHFR G CSC 
Sbjct: 562 IAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCK 621

Query: 769 GYW 771
            YW
Sbjct: 622 DYW 624



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 214/499 (42%), Gaps = 74/499 (14%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPER 59
           L +C++  +L    Q H  ++  G  +D      ++   A  K G+   +  +FD IP  
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
               +N++F  Y+        +  +  M+   + PN+F+   +I AC        G++IH
Sbjct: 84  DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 143

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC------- 172
            + +K G+ +D FS N L+ MY    +LE A  VF ++   D+VSW ++I G        
Sbjct: 144 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVD 203

Query: 173 -------VLHEHN--DW---------------ALKLFQQMKSSEINPNMFTYTSALKACA 208
                  ++ E N   W               A  LF +M+   +  + F   S L AC 
Sbjct: 204 KAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACT 263

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G+   E G+ +H  + K  I+ D  +   ++DMY KCG +++A  +F+ +P+K + +WN 
Sbjct: 264 GLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNC 323

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G   +G    A  LF  M RE V  D  T   VL + A           H+  V+  
Sbjct: 324 MIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA-----------HSGLVEEG 372

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
                Y+                  ++      ++   C  M+    + GL EEA KL  
Sbjct: 373 KHYFQYM-----------------TEVLGLKPGMEHFGC--MVDLLGRAGLLEEARKLIN 413

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAK 446
           EM    +NPD+ V  +L+ AC      E G+Q+   +I+   +    +G    L N+YA 
Sbjct: 414 EMP---VNPDAGVLGALVGACRIHGNTELGEQIGKKVIE---LEPHNSGRYVLLANLYAS 467

Query: 447 CGSIDDADRAFSEIPDRGI 465
            G  +D  +    + DRG+
Sbjct: 468 AGRWEDVAKVRKLMNDRGV 486



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 196/415 (47%), Gaps = 39/415 (9%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++ H   I+LG  +D  +   ++   A  K G+L  A+ VF  I HPD   +N +  G +
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI----- 228
             +     + ++ +M    ++PN FTY   ++AC      E G+Q+H  ++K        
Sbjct: 97  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156

Query: 229 --------------------------KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
                                     + D +    L+  Y++ G +D+AR +F LMPE+N
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            ++WN +I+ ++Q+    EA +LF  M  E V  D+   +++L +     A+   K +H 
Sbjct: 217 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 276

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
              K+  E D  +  ++ID Y KCG +E A ++F E     + +   MI   A  G GE 
Sbjct: 277 YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 336

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLV 441
           A++L+ EM+   + PD     ++L+ACA+    E+GK    ++ +  G          +V
Sbjct: 337 AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMV 396

Query: 442 NMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           ++  + G +++A +  +E+   PD G++   A++G    HG  +   Q+  +++E
Sbjct: 397 DLLGRAGLLEEARKLINEMPVNPDAGVL--GALVGACRIHGNTELGEQIGKKVIE 449



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 142/291 (48%), Gaps = 32/291 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++AC     +  G Q+H  V+  GF +D F  N+L+ MY    +   +RR+FD +P+R 
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185

Query: 61  VV-------------------------------SWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           VV                               SWN++ + YV  + L EA   F  M L
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
             +  ++F  +SM++AC G G    G+ IHGY  K G + D   A  ++DMY K G LE 
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF ++    I SWN +I G  +H   + A++LF++M+   + P+  T+ + L ACA 
Sbjct: 306 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 365

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMP 259
             L E G+     + ++      +   G +VD+  + G ++EAR + + MP
Sbjct: 366 SGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 416


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/700 (35%), Positives = 411/700 (58%), Gaps = 27/700 (3%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           GI  ++F ++S++ AC        GR++H + I  G+ +D+    AL+ MYAK G+L+DA
Sbjct: 5   GIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDA 64

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF+ +E  D+ +W+++I+        + A+ L+++M +  + PN+ T+  AL  CA +
Sbjct: 65  KRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASV 124

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                GR +H  ++  ++  D ++   L++MY KC  M EAR +F  M  +N+ ++  +I
Sbjct: 125 AGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMI 184

Query: 271 SGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           S ++Q G   EA  LF  M + E +  +  T +T+L +V     +   ++VH       F
Sbjct: 185 SAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGF 244

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           +++  + N+L+  YGKCG   +A K+F   +A ++++ TSMI AYAQ G  +EAL L+  
Sbjct: 245 DTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKR 304

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M   ++ P     SS LNACA L A ++G+++H  +++    S      SL++MYA+CGS
Sbjct: 305 M---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME-TSLLSMYARCGS 360

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +DDA R F+ +  R   S +AMI    QHGR K+AL+++ +M ++G+  + IT VSVL A
Sbjct: 361 LDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVA 420

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H  LVA+ +  F+S+    G+ P+ EHY CM+D+LGR+G+  +A ELV+TMP+Q +A 
Sbjct: 421 CSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAV 480

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
            W  LL   + + ++  G+ AA  +F + P ++  +V LSN+YA+A  +D+  +VR+ M+
Sbjct: 481 AWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEME 540

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS-------KEIYAKLDEVSDLLNKAGYVP 682
           +  +     +S+IE+ ++++ FT G R   +        + + + L E+ + + +AGYVP
Sbjct: 541 ERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVP 600

Query: 683 MVETDLHDV--------EESEKEQLLYHHSEKLAVAFGLIATP---PGATIRVKKNLRIC 731
               D  +V         E EK++ L  HSE+LA+A+GLIA         +RV  + R+C
Sbjct: 601 ----DTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVC 656

Query: 732 VDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            DCH++ + +S I+ + I VRD NRFHHF  G+CSCG +W
Sbjct: 657 SDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 253/504 (50%), Gaps = 10/504 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ ACT  + L  G ++H  ++ TGF +D  +  +L+ MYAKCG+  D++R+F+ +  + 
Sbjct: 16  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +W+S+ S Y      E AV  ++ M+  G+ PN  + +  +  CA       GR IH 
Sbjct: 76  LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +      D    ++L++MY K   + +A  VF+ ++  ++ S+ A+I+  V    +  
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF +M   E I PN +T+ + L A  G+   E GR++H  L      ++ +V   LV
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 255

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY KCGS  EAR +F  M  +N+I+W  +I+ + Q+G   EA +LF  M  E  G    
Sbjct: 256 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSG---V 312

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           + S+ L + A   A+   +++H   V+    S   +  SL+  Y +CG ++DA ++F   
Sbjct: 313 SFSSALNACALLGALDEGREIHHRVVEAHLASPQ-METSLLSMYARCGSLDDARRVFNRM 371

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D  +C +MI A+ Q G  ++AL++Y  M+   I  D     S+L AC++ S     +
Sbjct: 372 KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCR 431

Query: 420 Q-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
                 ++  G +        +V++  + G + DA+     +P     V+W  ++ G  +
Sbjct: 432 DFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKR 491

Query: 478 HG---RGKEALQMFGQMLEDGVLP 498
           HG   RG+ A +   ++     LP
Sbjct: 492 HGDLNRGERAARKVFELAPAETLP 515



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 211/409 (51%), Gaps = 17/409 (4%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+   I  + F  TS + AC  ++  E GR+LH  LI    ++D  +   L+ MYAKCGS
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +D+A+ +F  M  K+L AW+ +IS + + G    A  L+  M  EGV  +  T +  L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            AS   +   + +H   + +    DD + +SL++ Y KC  + +A K+F+   A ++ + 
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           T+MI+AY Q G   EAL+L+  M   E I P+++  +++L A   L   E+G++VH H+ 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
             GF ++    N+LV MY KCGS  +A + F  +  R ++SW++MI   AQHG  +EAL 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDI 545
           +F +M    V P+ ++  S L AC   G + E +  H   +E       M+     ++ +
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME---TSLLSM 354

Query: 546 LGRAGKFQEAMELVDTM----PFQANASV-----WGALLGAARIYKNVE 585
             R G   +A  + + M     F  NA +      G    A RIY+ +E
Sbjct: 355 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRME 403


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/682 (35%), Positives = 398/682 (58%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   +DL LG+Q+H + V TG + D    ++LV MY KC +  D+ R F  + ER+
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW +  +  V  +     +  F +M   G+  ++ + +S+  +CA        R++H 
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++IK  + +D     A+VD+YAK  +L DA   F  + +  + + NA++ G V       
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LFQ M  S I  ++ + +    ACA ++    G Q+HC  IK     D  V   ++D
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC ++ EA ++F  M +++ ++WN +I+   QN    +  +    M R G+  D  T
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VLK+ A  Q++     VH  ++K+    D ++ ++++D Y KCG + +A K+     
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG 501

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             +LV+  S+I+ ++     EEA K + EM D  + PD F  +++L+ CANL+  E GKQ
Sbjct: 502 GQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQ 561

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK   + D +  ++LV+MYAKCG++ D+   F +      VSW+AMI G A HG+
Sbjct: 562 IHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQ 621

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EAL+MF +M +  V+PNH T V+VL AC+H GL+ +   +F  M  ++ ++P  EH+A
Sbjct: 622 GFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFA 681

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+DILGR+   QEA++ + +MP +A+A +W  LL   +I ++VEV + AA  +  ++P+
Sbjct: 682 CMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPD 741

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            SS ++LLSN+YA +G W +V++ RR M+  +LKKEPG SWIEV+ +++ F  GD+ H R
Sbjct: 742 DSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPR 801

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
           S+E+Y  L+ +   +  +GY P
Sbjct: 802 SREVYEMLNNLIVEMKLSGYEP 823



 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/551 (33%), Positives = 281/551 (50%), Gaps = 31/551 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L A   +  L  G   H  ++ +GF    FV+N L+ MYA+CG    +R +FD +P R  
Sbjct: 11  LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFK-------------------------------EMVLS 90
           VSWN++ + Y H      A   F                                EM   
Sbjct: 71  VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+ P+  +L+ ++ AC G  D  LG +IH  ++K G + D+ + +ALVDMY K  +LEDA
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDA 190

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
           +  F  +   + VSW A IAGCV +E     L+LF QM+   +  +   Y S  ++CA +
Sbjct: 191 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAI 250

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                 RQLH   IK +  +D +VG  +VD+YAK  S+ +AR  F  +P   + A N ++
Sbjct: 251 TCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMM 310

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
            G ++ G   EA  LF +M R G+GFD  +LS V  + A  +      QVH L++K+ F+
Sbjct: 311 VGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFD 370

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            D  + N+++D YGKC  + +A  +F+E    D V+  ++I A  Q    E+ +    EM
Sbjct: 371 VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEM 430

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
               + PD F   S+L ACA L + E G  VH   IK G   D F  +++V+MY KCG I
Sbjct: 431 LRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMI 490

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            +A +    I  + +VSW+++I G + + + +EA + F +ML+ GV P+H T  +VL  C
Sbjct: 491 TEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTC 550

Query: 511 NHAGLVAEAKH 521
            +   +   K 
Sbjct: 551 ANLATIELGKQ 561



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/541 (29%), Positives = 254/541 (46%), Gaps = 43/541 (7%)

Query: 98  SLSSMINACAGSGDSLL--GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           + S +   CAG+G S L  G+  H   +  G+    F +N L+ MYA+ G    A  VF 
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE----------------------- 192
            + H D VSWN ++           A  LF  M   +                       
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 193 --------INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
                   + P+  T    LKAC G+E   LG Q+H   +K  ++ D   G  LVDMY K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           C S+++A   FH M E+N ++W   I+G +QN        LF  M R G+G  Q   ++V
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            +S A+   +   +Q+HA ++K  F +D  +  +++D Y K   + DA + F       +
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTV 303

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            AC +M+    + GLG EAL+L+  M    I  D    S + +ACA +  Y QG QVH  
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
            IK GF  D    N+++++Y KC ++ +A   F E+  R  VSW+A+I  L Q+   ++ 
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA---EAKHHFESMEKKFGIQPMQEHYAC 541
           +    +ML  G+ P+  T  SVL AC  AGL +    +  H ++++   G+       + 
Sbjct: 424 IAYLNEMLRYGMEPDDFTYGSVLKAC--AGLQSLEYGSVVHGKAIKSGLGLDAFVS--ST 479

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH-AAEML-FAIEP 599
           ++D+  + G   EA +L D +  Q   S W +++    + K  E  Q   +EML   ++P
Sbjct: 480 VVDMYCKCGMITEAQKLHDRIGGQELVS-WNSIISGFSLNKQSEEAQKFFSEMLDIGVKP 538

Query: 600 E 600
           +
Sbjct: 539 D 539


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/573 (42%), Positives = 341/573 (59%), Gaps = 1/573 (0%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +TS L++C        GRQLH  L+   +  D ++   LVD+YA CG +  AR +F  MP
Sbjct: 65  HTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMP 124

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           ++N+  WN++I  + + G    A  L+  M   GV  D  T   VLK+ A+   +   ++
Sbjct: 125 KRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGRE 184

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VH     T +  D ++   ++D Y KCG V+DA  +F   +  D V   SMI AY Q G 
Sbjct: 185 VHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGR 244

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
             EAL L  +M    I P      S ++A A+ +A  +G+++H    + GF        S
Sbjct: 245 PMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTS 304

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLP 498
           LV+MYAK G +  A   F ++  R +VSW+AMI G   HG   EAL +F +M  D  V P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTP 364

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           ++IT V VL ACNH G+V EAK  F  M   + I+P  +HY C+ID+LG  G+F+EA +L
Sbjct: 365 DNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDL 424

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           +  M  + ++ +WGALL   +I+KNVE+G+ A + L  +EPE +  +V LSNIYA +G W
Sbjct: 425 IKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKW 484

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
           +  A+VR+ M +  LKK    SWIE+K K + F VGD SH RS EIY +L+ +  L++ A
Sbjct: 485 EKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDA 544

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GYVP +    H+V++ EK  ++  HSE+LA+AFGLI+TPPG  + V KNLR+C DCH   
Sbjct: 545 GYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVI 604

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + IS+IV REII+RDVNR+HHF NG CSC  YW
Sbjct: 605 KLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 235/527 (44%), Gaps = 65/527 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C +   L  G Q+HG ++ +G   D  ++  LV +YA CG    +RRLFD +P+R+
Sbjct: 68  ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  WN L   Y      E AV  ++ MV  G+ P+ F+   ++ ACA   D   GR++H 
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                 +  D+F    +VDMYAK G ++DA AVF  I   D V WN++IA    +     
Sbjct: 188 RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPME 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L + M ++ I P + T  SA+ A A       GR+LH    +        +   LVD
Sbjct: 248 ALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVD 307

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
           MYAK G +  AR++F  + ++ L++WN +I G+  +G   EA +LF  M  +  V  D  
Sbjct: 308 MYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNI 367

Query: 300 TLSTVLKSVASFQAIGVCKQ-----VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
           T   VL +      +   K+     V+A S+K   +        +ID  G  G  E+A  
Sbjct: 368 TFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQH----YTCVIDVLGHTGRFEEAYD 423

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           + K  S                                  I PDS +  +LLN C     
Sbjct: 424 LIKGMS----------------------------------IEPDSGIWGALLNGCKIHKN 449

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI-----VS 467
            E G+     +I+   +    AGN   L N+YA+ G  + A R    + +RG+      S
Sbjct: 450 VELGELALQKLIE---LEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACS 506

Query: 468 WSAMIG-------GLAQHGRGKEAL----QMFGQMLEDGVLPNHITL 503
           W  + G       G A H R  E      ++ G M + G +P+ I +
Sbjct: 507 WIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPV 553



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 198/395 (50%), Gaps = 10/395 (2%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           +S++ +C  SG    GR++HG  +  G   D   +  LVD+YA  G +  A  +F  +  
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            ++  WN +I         + A++L++ M    + P+ FTY   LKACA +   E GR++
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  +       D  V  G+VDMYAKCG +D+AR +F  +  ++ + WN +I+ + QNG  
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           MEA +L   M   G+G    TL + + + A   A+   +++H    +  F   D +  SL
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSL 305

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ-DREINPD 398
           +D Y K G V+ A  +F++    +LV+  +MI  Y   G  +EAL L+ +M+ D ++ PD
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDAD--- 454
           +     +L+AC +    E+ K+    ++    +  T    + ++++    G  ++A    
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLI 425

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGR---GKEALQ 486
           +  S  PD GI  W A++ G   H     G+ ALQ
Sbjct: 426 KGMSIEPDSGI--WGALLNGCKIHKNVELGELALQ 458


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/690 (37%), Positives = 404/690 (58%), Gaps = 40/690 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED---AVAVFKDIEHPDIVSWNAVIAGC 172
           R IH   IK G  +  ++ + L++      + +    A++VF  I+ P+++ WN +  G 
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            L      ALKL+  M S  + P+ +T+   LK+CA  ++++ G+Q+H  ++K+    D 
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
            V   L+ MYA+ G +++AR +F +                               +P K
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFP-WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           ++++WN +ISG+++ G   EA  LF   M    V  D++T+ TV+ + A   +I + + V
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           H+      F S+  IVN+LID Y K G VE A ++F      D+++  ++I  Y    L 
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFA-G 437
           +EAL L+ EM      P+     S+L ACA+L A + G+ +HV+I K   G +++  +  
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 438 NSLVNMYAKCGSIDDADRAF-SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            SL++MYAKCG ID A + F S + +R + +W+AMI G A HGR   A  +F +M  +G+
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ IT V +L AC+H+G++   ++ F SM + + I P  EHY CMID+LG +G F+EA 
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
           E+++TMP + +  +W +LL A +I+ N+E+G+  A+ L  IEP  S ++VLLSNIYA+AG
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAG 544

Query: 617 MWDNVAKVRRFMKDNKLKKE-PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
            W+ VAK+R  + D  +KK+ PG S IE+   V+ F +GD+ H +++EIY  L+E+  LL
Sbjct: 545 RWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLL 604

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            +AG+VP     L ++EE  +E  L HHSEKLA+AFGLI+T PG  + + KNLR+C +CH
Sbjct: 605 EEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCH 664

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSC 765
            + + ISKI  REII RD  RF HFR+G C
Sbjct: 665 EATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 234/506 (46%), Gaps = 80/506 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR---------- 50
           +LK+C   K    G Q+HG V+  GFD D +V  SL+ MYA+ G   D+R          
Sbjct: 95  LLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRD 154

Query: 51  ---------------------RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE-MV 88
                                +LFD IP + VVSWN++ S YV     +EA+  FKE M+
Sbjct: 155 VVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMM 214

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           ++ +RP+E ++ ++++ACA S    LGR +H +    G+ S++   NAL+D+Y+K G +E
Sbjct: 215 MTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVE 274

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F  + + D++SWN +I G         AL LFQ+M  S   PN  T  S L ACA
Sbjct: 275 TACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 334

Query: 209 GMELKELGRQLHCSL---IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF-HLMPEKNLI 264
            +   ++GR +H  +   +K  + +   +   L+DMYAKCG +D A+ +F   M  ++L 
Sbjct: 335 HLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLS 394

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
            WN +ISG   +G    A  +F  M   G+  D  T   +L + +    + + + +   S
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR-S 453

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +   +E     +   ++ YG                         MI      GL +EA 
Sbjct: 454 MTRGYE-----ITPKLEHYG------------------------CMIDLLGHSGLFKEAE 484

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS----- 439
           ++   M    + PD  +  SLL AC      E G+     +IK         GNS     
Sbjct: 485 EMINTMP---MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE------PGNSGSYVL 535

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGI 465
           L N+YA  G  ++  +  + + D+G+
Sbjct: 536 LSNIYAAAGRWNEVAKIRALLNDKGM 561



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 260/583 (44%), Gaps = 78/583 (13%)

Query: 17  VHGIVVFTGFDSDEFVANSLV---VMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           +H  ++ TG  +  +  + L+   V+      F  +  +FD I E +++ WN++F  +  
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                 A+  +  M+  G+ P+ ++   ++ +CA S     G++IHG+ +KLG+D D++ 
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 134 ANALVDMYAKVGNLEDAVAV-------------------------------FKDIEHPDI 162
             +L+ MYA+ G LEDA  V                               F +I   D+
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           VSWNA+I+G V   +   AL+LF++ M  + + P+  T  + + ACA  +  ELGR +H 
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
            +      S+  +   L+D+Y+K G ++ A  +F  +  K++I+WN +I G+       E
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKE 306

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL---SVKTAFESDDYIVNS 338
           A  LF  M R G   +  T+ ++L + A   AI + + +H      +K    +   +  S
Sbjct: 307 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTS 366

Query: 339 LIDAYGKCGHVEDAVKIFKES-SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           LID Y KCG ++ A ++F  S S   L    +MI+ +A  G    A  ++  M+   I P
Sbjct: 367 LIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEP 426

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D      LL+AC++    + G+ +        F S T                    R +
Sbjct: 427 DDITFVGLLSACSHSGMLDLGRNI--------FRSMT--------------------RGY 458

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
              P   +  +  MI  L   G  KEA +M   M  +   P+ +   S+L AC   G + 
Sbjct: 459 EITPK--LEHYGCMIDLLGHSGLFKEAEEMINTMPME---PDGVIWCSLLKACKIHGNLE 513

Query: 518 EAKHHFESMEKKF-GIQPMQE-HYACMIDILGRAGKFQEAMEL 558
                 ES  KK   I+P     Y  + +I   AG++ E  ++
Sbjct: 514 LG----ESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKI 552


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/633 (37%), Positives = 376/633 (59%), Gaps = 5/633 (0%)

Query: 143 KVGNLEDAVAVFKD--IEHPDIVSWNAVIAGCVLHEHNDWALKLFQ--QMKSSEINPNMF 198
           KV  +E  V V +D  I         + I   V+   +  A++LF+  +++         
Sbjct: 60  KVEYMERNVPVLEDTQIRKTSPSGLCSQIEKLVVCNRHREAMELFEILELEHDGYGVGAS 119

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           TY + + AC G+      +++   +I    + D  V   ++ M+ KCG M +AR +F  M
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           PEK++ +W  ++ G +  G   EA  LF  M++E       T +T++++ A    + V K
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q+H+ ++K     D ++  +LID Y KCG +EDA  +F +      V   S+I +YA  G
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             EEAL LY EM+D     D F  S ++  CA L++ E  KQ H  +++ GF +D  A  
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANT 359

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LV+ Y+K G ++DA   F+ +  + ++SW+A+I G   HG+G+EA++MF QML++GV P
Sbjct: 360 ALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTP 419

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
            H+T ++VL AC+++GL       F SM++   ++P   HYACMI++LGR     EA  L
Sbjct: 420 THVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYAL 479

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           + T PF+  A++W ALL A R++KN+E+G+ AAE L+ +EPEK   +++L N+Y S+G  
Sbjct: 480 IRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKL 539

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
              A + + +K   L+  P  SW+EVK + Y F  GD+SH+++KEIY K+D +   + K 
Sbjct: 540 KEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKH 599

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GY    ET L DV+E E++++L +HSEKLA+AFGLI TP    +++ +  R+C DCH++ 
Sbjct: 600 GYAEENETLLPDVDE-EEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAI 658

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + I+ +  REI+VRD +RFHHFRNGSCSCG YW
Sbjct: 659 KLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 174/313 (55%), Gaps = 8/313 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   + +    +V   ++ +GF+ D +V N ++ M+ KCG  +D+R+LFD +PE+ 
Sbjct: 124 LVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKD 183

Query: 61  VVSWNSLFSCYVHCDFLEEA----VCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
           V SW ++    V      EA    +C +KE      R    + ++MI A AG G   +G+
Sbjct: 184 VASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSR----TFATMIRASAGLGLVQVGK 239

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH  ++K G   D F + AL+DMY+K G++EDA  VF  +     V WN++IA   LH 
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           +++ AL L+ +M+ S    + FT +  ++ CA +   E  +Q H +L++    +D +   
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANT 359

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVD Y+K G M++AR +F+ M  KN+I+WN +I+G+  +G   EA  +F  M +EGV  
Sbjct: 360 ALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTP 419

Query: 297 DQTTLSTVLKSVA 309
              T   VL + +
Sbjct: 420 THVTFLAVLSACS 432



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 232/470 (49%), Gaps = 21/470 (4%)

Query: 72  VHCDFLEEAVCFFK--EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
           V C+   EA+  F+  E+   G      +  ++++AC G       +++  Y I  G++ 
Sbjct: 92  VVCNRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEP 151

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D++  N ++ M+ K G + DA  +F ++   D+ SW  ++ G V   +   A +LF  M 
Sbjct: 152 DLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMW 211

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
               +    T+ + ++A AG+ L ++G+Q+H   +K  +  D  V   L+DMY+KCGS++
Sbjct: 212 KEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIE 271

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A  +F  MPEK  + WN +I+ +  +G   EA SL+  M   G   D  T+S V++  A
Sbjct: 272 DAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICA 331

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              ++   KQ HA  V+  F +D     +L+D Y K G +EDA  +F      ++++  +
Sbjct: 332 RLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNA 391

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV-----H 424
           +I  Y   G G+EA++++ +M    + P      ++L+AC+     ++G ++       H
Sbjct: 392 LIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDH 451

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR--- 480
            +K   M        ++ +  +   +D+A       P +   + W+A++     H     
Sbjct: 452 KVKPRAMHYA----CMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLEL 507

Query: 481 GK-EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           GK  A +++G  +E   L N+I L+++    N +G + EA    ++++KK
Sbjct: 508 GKLAAEKLYG--MEPEKLCNYIVLLNLY---NSSGKLKEAAGILQTLKKK 552



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 137/250 (54%), Gaps = 1/250 (0%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           +G Q+H   +  G   D FV+ +L+ MY+KCG+  D+  +FD +PE++ V WNS+ + Y 
Sbjct: 237 VGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA 296

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
              + EEA+  + EM  SG   + F++S +I  CA        ++ H   ++ G+ +D+ 
Sbjct: 297 LHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIV 356

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           +  ALVD Y+K G +EDA  VF  + H +++SWNA+IAG   H     A+++F+QM    
Sbjct: 357 ANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEG 416

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEA 251
           + P   T+ + L AC+   L + G ++  S+ +  ++K   +    ++++  +   +DEA
Sbjct: 417 VTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEA 476

Query: 252 RMIFHLMPEK 261
             +    P K
Sbjct: 477 YALIRTAPFK 486



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 125/245 (51%), Gaps = 14/245 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ C     L    Q H  +V  GF +D     +LV  Y+K G   D+R +F+ +  ++
Sbjct: 326 VIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKN 385

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SWN+L + Y +    +EAV  F++M+  G+ P   +  ++++AC+ SG S  G +I  
Sbjct: 386 VISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIF- 444

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           YS+K  +     + +   ++++  +   L++A A+ +     P    W A++  C +H++
Sbjct: 445 YSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKN 504

Query: 178 NDW----ALKLF----QQMKSSEINPNMFTYTSALKACAGM--ELKELGRQLHCSLIKME 227
            +     A KL+    +++ +  +  N++  +  LK  AG+   LK+ G ++  +   +E
Sbjct: 505 LELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVE 564

Query: 228 IKSDP 232
           +K  P
Sbjct: 565 VKKQP 569


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/576 (40%), Positives = 347/576 (60%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           ++ T  + L A A ++  +LG Q+ C  IK    S   +  GL+ +++KCG ++ AR++F
Sbjct: 30  DLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLF 89

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             + +K+LI+ N +ISG   NG   ++  LF  +   G     +T+  ++   + F    
Sbjct: 90  GEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSY 149

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           +C  +H   VK    S   +  +L   Y +   +  A ++F ES+   L +  +MI+   
Sbjct: 150 LCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCT 209

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           Q GL + A+ L+  MQ   +NP+    +S+L+ACA + A   G+ VH  I    F S+ +
Sbjct: 210 QNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVY 269

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
              +L++MYAKCGSI  A   F  +P++  V+W+AMI G   HG G+EAL++F  ML   
Sbjct: 270 VSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSS 329

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V P  +T +SVL AC+HAGLV E    F +M   FG +P+ EHYACM+DILGRAG+ ++A
Sbjct: 330 VKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKA 389

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
           +E +  MP +    VWGALLGA  I+K+  +   A+E LF ++PE    +VL+SNIY+  
Sbjct: 390 LEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVE 449

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
             +   A VR+  K  +L K PG + IE+    + FT GD+SH +SK IYA+LD+++  +
Sbjct: 450 RKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKM 509

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            +AG+     T LHD+EE EKE  +  HSEKLA+AFGLI+T PGA IR+ KNLR+C+DCH
Sbjct: 510 TEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCH 569

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
              +F+SKI  R I+VRD NRFHHF++G CSCG YW
Sbjct: 570 NWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 186/361 (51%), Gaps = 7/361 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A    ++L LG+Q+  + +  GF S   +   L+ +++KCG    +R LF  I ++ 
Sbjct: 37  VLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKD 96

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++S N++ S +      E++V  FKE++ SG R +  ++  +I   +  G S L   IHG
Sbjct: 97  LISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHG 156

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +KLG  S    + AL  +Y ++  +  A  +F +     + SWNA+I+GC  +   D 
Sbjct: 157 FCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDA 216

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LFQ M+ + +NPN  T TS L ACA +    LG  +H  +     +S+  V   L+D
Sbjct: 217 AISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALID 276

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  AR +F LMPEKN + WN +ISG+  +G   EA  LF  M    V     T
Sbjct: 277 MYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLT 336

Query: 301 LSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             +VL + +     G+ K+     H +     FE        ++D  G+ G ++ A++  
Sbjct: 337 FLSVLYACSH---AGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFI 393

Query: 357 K 357
           K
Sbjct: 394 K 394



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 209/417 (50%), Gaps = 7/417 (1%)

Query: 67  LFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
           + S +V     E+++  F +MVL +G R +  ++ +++ A A   +  LG +I   +IK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           G+ S +     L+ +++K G +E A  +F +I   D++S NA+I+G   +   + +++LF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           +++ SS    +  T    +   +      L   +H   +K+ I S   V   L  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
             M  AR +F    EK L +WN +ISG  QNG    A SLF  M +  V  +  T++++L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            + A   A+ + + VH+L     FES+ Y+  +LID Y KCG +  A ++F      + V
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HVH 424
              +MI+ Y   G G+EALKL+ +M    + P      S+L AC++    ++G  + H  
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 425 IIKFGF--MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +  FGF  +++ +A   +V++  + G +  A      +P + G   W A++G    H
Sbjct: 361 VHDFGFEPLAEHYA--CMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 8/348 (2%)

Query: 269 VISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           +ISG ++N    ++  +F  M    G  FD TT+  VL +VA  Q + +  Q+  L++K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            F S   ++  LI  + KCG VE A  +F E    DL++C +MI+ +   G  E++++L+
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            E+        S     L+   +          +H   +K G +S +    +L  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
             +  A + F E  ++ + SW+AMI G  Q+G    A+ +F  M ++ V PN +T+ S+L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC   G ++  +    S+ K    +        +ID+  + G    A EL D MP + N
Sbjct: 241 SACAQIGALSLGE-WVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMP-EKN 298

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAI--EPEKSSTHVLLSNIYA 613
              W A++    ++ +   GQ A ++ + +     K +    LS +YA
Sbjct: 299 EVTWNAMISGYGLHGH---GQEALKLFYDMLSSSVKPTGLTFLSVLYA 343



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 12/206 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L LG  VH ++    F+S+ +V+ +L+ MYAKCG+   +R LFD +PE++
Sbjct: 239 ILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKN 298

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG-----DSLLG 115
            V+WN++ S Y      +EA+  F +M+ S ++P   +  S++ AC+ +G     D +  
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
             +H +    G++        +VD+  + G L+ A+   K +   P    W A++  C++
Sbjct: 359 TMVHDF----GFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMI 414

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTY 200
           H+  D  L      K  E++P    Y
Sbjct: 415 HK--DTNLAHVASEKLFELDPENIGY 438


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/693 (35%), Positives = 397/693 (57%), Gaps = 5/693 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE--FVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +L+ C   + L     VHG ++ + F +     + N +   Y+KC +   + RLFD + +
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+  SW  L +         +   FF EM   GI P++F+ S ++  C G     LG  +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +  G+ S  F + AL++MYAK+  +ED+  VF  +   ++VSWNA+I G   ++  
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A  LF +M    + P+  T+    KA   +      +++    +++ + S+ +VG  L
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313

Query: 239 VDMYAKCGSMDEARMIF--HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           +DM +KCGS+ EAR IF  H +  +    WN +ISG+L++G + +A  LF  M +  +  
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKI 355
           D  T  +V  ++A+ + + + K+VHA ++K+  E +   I N++ +AY KCG +ED  K+
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKV 433

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      DL++ TS++TAY+Q    ++A++++  M+   I P+ F  SS+L +CANL   
Sbjct: 434 FNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLL 493

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E G+QVH  I K G   D    ++LV+MYAKCG + DA + F+ I +   VSW+A+I G 
Sbjct: 494 EYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGH 553

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQHG   +ALQ+F +M++ GV PN +T + VL AC+H GLV E   +F+ M+K +G+ P 
Sbjct: 554 AQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPE 613

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYAC++D+L R G   +AME +  MP + N  VW  LLGA R++ NVE+G+ AA+ + 
Sbjct: 614 MEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKIL 673

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           + + E S+T+VLLSN Y  +G + +   +R  MK+  +KKEPG SWI V   ++ F  GD
Sbjct: 674 SFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGD 733

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           + H    +IYAKL+E+   L     VP +  +L
Sbjct: 734 QQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/666 (35%), Positives = 393/666 (59%), Gaps = 13/666 (1%)

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HG+ +K G   + F  + LV++YAK GN+EDA  VF ++   ++V+W  ++ G V +  
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              A+ +FQ+M  +   P+++T ++ L AC+ ++  +LG Q H  +IK  +  D  VG  
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L  +Y+KCG +++A   F  + EKN+I+W   +S    NG  ++   LF  M    +  +
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPN 268

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + TL++ L       ++ +  QV++L +K  +ES+  + NSL+  Y K G + +A ++F 
Sbjct: 269 EFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFN 328

Query: 358 ESSAVDLVACTSMITAYAQF-----------GLGEEALKLYLEMQDREINPDSFVCSSLL 406
                 +V   +MI  +AQ              G EALKL+ ++    + PD F  SS+L
Sbjct: 329 RMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVL 388

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
           + C+ + A EQG+Q+H   IK GF+SD     SL++MY+KCGSI+ A +AF E+  R ++
Sbjct: 389 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMI 448

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           +W++MI G +QHG  ++AL +F  M   GV PN +T V VL AC+HAG+V++A ++FE M
Sbjct: 449 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIM 508

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
           +KK+ I+P  +HY CM+D+  R G+ ++A+  +  M ++ +  +W   +   + + N+E+
Sbjct: 509 QKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLEL 568

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G +AAE L +++P+   T+VLL N+Y SA  +++V++VR+ M++ K+ K    SWI +KD
Sbjct: 569 GFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKD 628

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLL--YHHS 704
           KVY+F    ++H +S  I   L+++   +   GY  +   ++ D EE E++      +HS
Sbjct: 629 KVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHS 688

Query: 705 EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
           EKLA+ FGL   P  + IRV K+  IC D H   +++S +  REIIV+D  R H F NG 
Sbjct: 689 EKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGE 748

Query: 765 CSCGGY 770
           CSCG +
Sbjct: 749 CSCGNF 754



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/495 (32%), Positives = 258/495 (52%), Gaps = 19/495 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C   +       VHG V+ TG   + FV + LV +YAKCGN  D+RR+FD +  R+
Sbjct: 73  LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +L   +V     + A+  F+EM+ +G  P+ ++LS++++AC+      LG + H 
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK   D D    +AL  +Y+K G LEDA+  F  I   +++SW + ++ C  +     
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF +M + +I PN FT TSAL  C  +   ELG Q++   IK   +S+  V   L+ 
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLY 312

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ------------NGGDMEAASLFPW 288
           +Y K G + EA  +F+ M + +++ WN +I+GH Q            + G  EA  LF  
Sbjct: 313 LYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS-EALKLFSK 371

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           +   G+  D  TLS+VL   +   AI   +Q+HA ++KT F SD  +  SLI  Y KCG 
Sbjct: 372 LNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGS 431

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           +E A K F E S   ++A TSMIT ++Q G+ ++AL ++ +M    + P++     +L+A
Sbjct: 432 IERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSA 491

Query: 409 CANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRG 464
           C++     Q      +   K+           +V+M+ + G ++ A     ++   P   
Sbjct: 492 CSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEF 551

Query: 465 IVSWSAMIGGLAQHG 479
           I  WS  I G   HG
Sbjct: 552 I--WSNFIAGCKSHG 564



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 181/343 (52%), Gaps = 12/343 (3%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y   L+ C         + +H  ++K     +  V   LV++YAKCG+M++AR +F  M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +N++AW  ++ G +QN     A  +F  M   G      TLS VL + +S Q++ +  Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
            HA  +K   + D  + ++L   Y KCG +EDA+K F      ++++ TS ++A A  G 
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
             + L+L++EM   +I P+ F  +S L+ C  + + E G QV+   IKFG+ S+    NS
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH-----------GRGKEALQMF 488
           L+ +Y K G I +A R F+ + D  +V+W+AMI G AQ             RG EAL++F
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKF 530
            ++   G+ P+  TL SVL  C+    + + +  H ++++  F
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGF 412


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/592 (39%), Positives = 351/592 (59%), Gaps = 18/592 (3%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M  S  +PN FT+  A+K+CA + L   G+QLHC + K     +P V   L+ MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 248 MDEARMIFHLMPE--KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           +D AR +F   P+  K  + +N ++SG+  N    +   LF  M   GV  +  T+  ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           +       +G+   VH   VK   + D  + N L+  Y K G ++   K+F E     L+
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
              +MI  YAQ GL    L+LY EM+ +   PD      +L++CA+L A   GK+V   +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
             FGF S+ F  N+LVNMYA+CG++  A   F  +P + +VSW+A+IGG   HG+G+ A+
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            +F +M+  G+ P+    VSVL AC+HAGL  +   +F  ME+K+G++P  EHY+CM+D+
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGRAG+  EA EL+++M  +A+ ++WGALLGA +I++NVE+ + A E +  +EP  +  +
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYY 420

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLLSN+Y  AG  + + +VR  M+  KLKK+PG S++E K +V+ F  GDR+H ++ EIY
Sbjct: 421 VLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIY 480

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH------HSEKLAVAFGLIATPPG 719
            KL+E+ +L+           DL   ++++ E+   +      HSEKLAVAF L+ T   
Sbjct: 481 KKLNELENLVK----------DLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLNTRKE 530

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             I + KNLRIC DCH   + +SKIV R+ +VRD  RFHHF+NG CSC  YW
Sbjct: 531 TEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 181/365 (49%), Gaps = 15/365 (4%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--R 59
           +K+C +      G Q+H  V  TG   + FV  SL+ MY KC    ++R+LFD  P+  +
Sbjct: 17  IKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRK 76

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V +NSL S Y     +++ V  F EM   G+  N  ++  ++  C   G+  LG  +H
Sbjct: 77  LTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVH 136

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G+ +K G D D    N L+ MY K G ++    +F ++    +++WNA+I G   +   +
Sbjct: 137 GFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLAN 196

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
             L+L+++M+S    P+  T    L +CA +    +G+++   +      S+P +   LV
Sbjct: 197 NVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALV 256

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MYA+CG++ +AR IF  MP K++++W  +I G+  +G    A  LF  M R G+  D T
Sbjct: 257 NMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGT 316

Query: 300 TLSTVLKSVA-------SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
              +VL + +            GV ++ + L       S       ++D  G+ G + +A
Sbjct: 317 AFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYS------CMVDLLGRAGRLNEA 370

Query: 353 VKIFK 357
            ++ +
Sbjct: 371 RELIE 375



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 195/413 (47%), Gaps = 8/413 (1%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+ SG  PN F+    I +CA     + G+++H +  K G   + F   +L+ MY K   
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 147 LEDAVAVFKDIEHPD----IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           +++A  +F   E+P      V +N++++G  L+      + LF +M+   +  N  T   
Sbjct: 61  IDNARKLFD--ENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLG 118

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            ++ C       LG  +H   +K  +  D  VG  L+ MY K G +D  R +F  MP K 
Sbjct: 119 LVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKG 178

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           LI WN +I+G+ QNG       L+  M  +G   D  TL  VL S A   A+ V K+V  
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
                 F S+ ++ N+L++ Y +CG+++ A  IF       +V+ T++I  Y   G GE 
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLV 441
           A+ L+ EM    I PD     S+L+AC++     +G     V   K+G        + +V
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE 493
           ++  + G +++A      +  R   + W A++G    H   + A   F Q++E
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIE 411



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 7/262 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C    +L LG+ VHG  V  G D D  V N L+ MY K G     R+LFD +P + 
Sbjct: 119 LVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKG 178

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +++WN++ + Y         +  +KEM   G  P+  +L  ++++CA  G   +G+++  
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G+ S+ F  NALV+MYA+ GNL+ A  +F  +    +VSW A+I G  +H   + 
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
           A+ LF +M    I P+   + S L AC+   L   G         ME K     G     
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDY---FGVMERKYGLRPGAEHYS 355

Query: 238 -LVDMYAKCGSMDEARMIFHLM 258
            +VD+  + G ++EAR +   M
Sbjct: 356 CMVDLLGRAGRLNEARELIESM 377


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/611 (38%), Positives = 360/611 (58%), Gaps = 29/611 (4%)

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           QM     N     Y + L  C        G+++H  +IK        +   L+ +Y KC 
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF-------------------- 286
           S+ +A  +F  MPE+N+++W  +IS + Q G   +A +LF                    
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352

Query: 287 ----PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
               PW+  E   F   T +TVL S  S     + +Q+H+L +K  +E   ++ +SL+D 
Sbjct: 353 NPNRPWVCTEPNEF---TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDM 409

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y K G + +A  +F+     D+V+CT++I+ YAQ GL EEAL+L+  +Q   +  +    
Sbjct: 410 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 469

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           + +L A + L+A + GKQVH H+++    S     NSL++MY+KCG++  + R F  + +
Sbjct: 470 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 529

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKH 521
           R ++SW+AM+ G ++HG G+E L++F  M E+  V P+ +T+++VL  C+H GL  +  +
Sbjct: 530 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 589

Query: 522 HFESMEK-KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            F  M   K  ++P  EHY C++D+LGR+G+ +EA E +  MPF+  A++WG+LLGA R+
Sbjct: 590 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRV 649

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           + NV++G+ A + L  IEP  +  +V+LSN+YASAG W++V+ +R  M    + KEPG S
Sbjct: 650 HSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRS 709

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLL 700
            IE+   ++TF   DRSH R +EI  K+ E+S    + GYVP +   LHDV+E +KE++L
Sbjct: 710 SIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKIL 769

Query: 701 YHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF 760
             HSEKLA++FGLIA+P    IRV KNLRICVDCH   ++ISK+  RE+ +RD NRFH  
Sbjct: 770 LGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRI 829

Query: 761 RNGSCSCGGYW 771
             G CSC  YW
Sbjct: 830 VGGKCSCEDYW 840



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 228/440 (51%), Gaps = 34/440 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +K+    G +VH  ++ T +    F+   L+V+Y KC +  D+  +FD +PER+
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFF---KEMVLSGI------------------RPNEFSL 99
           VVSW ++ S Y    +  +A+  F    ++ L+G+                   PNEF+ 
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           ++++ +C  S   +LGR+IH   IKL Y+  +F  ++L+DMYAK G + +A  VF+ +  
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 428

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VS  A+I+G      ++ AL+LF++++   +  N  TYT  L A +G+   +LG+Q+
Sbjct: 429 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQV 488

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H  +++ EI S  ++   L+DMY+KCG++  +R IF  M E+ +I+WN ++ G+ ++G  
Sbjct: 489 HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 548

Query: 280 MEAASLFPWMYREG-VGFDQTTLSTVLKSVA----SFQAIGVCKQVHALSVKTAFESDDY 334
            E   LF  M  E  V  D  T+  VL   +      + + +   + +  ++   + + Y
Sbjct: 549 REVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHY 608

Query: 335 IVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
               ++D  G+ G VE+A +  K    E +A    +       ++   +GE A +  LE+
Sbjct: 609 --GCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEI 666

Query: 391 QDREINPDSFVCSSLLNACA 410
           +    N  ++V  S L A A
Sbjct: 667 EPG--NAGNYVILSNLYASA 684



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 228/466 (48%), Gaps = 35/466 (7%)

Query: 66  SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
           S F+ ++H   L++ +    +M L G      + ++++N C        G+++H + IK 
Sbjct: 219 STFTTHIH---LQQPLL---QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKT 272

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
            Y   +F    L+ +Y K  +L DA  VF ++   ++VSW A+I+      +   AL LF
Sbjct: 273 RYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLF 332

Query: 186 --------------QQMKSSEIN-------PNMFTYTSALKACAGMELKELGRQLHCSLI 224
                          ++K S  N       PN FT+ + L +C       LGRQ+H  +I
Sbjct: 333 FADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLII 392

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
           K+  +    VG  L+DMYAK G + EAR +F  +PE+++++   +ISG+ Q G D EA  
Sbjct: 393 KLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALE 452

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           LF  +  EG+  +  T + VL +++   A+ + KQVH   +++   S   + NSLID Y 
Sbjct: 453 LFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYS 512

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EINPDSFVCS 403
           KCG++  + +IF       +++  +M+  Y++ G G E LKL+  M++  ++ PDS    
Sbjct: 513 KCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTIL 572

Query: 404 SLLNACANLSAYEQGKQVHVHII--KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           ++L+ C++    ++G  +   +   K            +V++  + G +++A     ++P
Sbjct: 573 AVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMP 632

Query: 462 DRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITL 503
                + W +++G    H     G+ A Q   + +E G   N++ L
Sbjct: 633 FEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLE-IEPGNAGNYVIL 677


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/694 (37%), Positives = 388/694 (55%), Gaps = 38/694 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHP---DIVSWNAVIA 170
           ++IH   IK G ++ +F  + L+   A    G+L  A+++F++ +     ++  WN++I 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           G  L      +L LF +M    + PN  T+    K+C   +    G+QLH   +K+ +  
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 231 DPIVGVGLVDMYAKCGSMD-------------------------------EARMIFHLMP 259
           +P V   ++ MYA  G MD                               +AR +F  +P
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            K++++WN +ISG++Q+G   EA   F  M    V  +++T+  VL +    ++  + K 
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           + +      F S+  + N+LID Y KCG  + A ++F      D+++  +MI  Y+   L
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSL 344

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGN 438
            EEAL L+  M    + P+      +L+ACA L A + GK VH +I K     S+     
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWT 404

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL- 497
           SL++MYAKCG I+ A+R F  +  R + SW+AM+ G A HG  + AL +F +M+  G+  
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFR 464

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+ IT V VL AC  AGLV     +F SM + +GI P  +HY CMID+L RA KF+EA  
Sbjct: 465 PDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEI 524

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
           L+  M  + + ++WG+LL A + +  VE G++ AE LF +EPE +   VLLSNIYA AG 
Sbjct: 525 LMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGR 584

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           WD+VA++R  + D  +KK PG + IE+   V+ F VGD+ H     IY  L+EV  LL +
Sbjct: 585 WDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEE 644

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            G+VP     L+D++E  KE  L  HSEKLA++FGLI T PG TIR+ KNLR+C +CH++
Sbjct: 645 NGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSA 704

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + ISKI +REII RD NRFHHF++G CSC   W
Sbjct: 705 TKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 209/441 (47%), Gaps = 38/441 (8%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D+  F A  L+  Y   G   D+RRLFD IP + VVSWN++ S YV     EEA+  F E
Sbjct: 196 DAVSFTA--LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M  + + PN+ ++  +++AC  +    LG+ I  +    G+ S++   NAL+DMY K G 
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
            + A  +F  IE  D++SWN +I G       + AL LF+ M  S + PN  T+   L A
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373

Query: 207 CAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           CA +   +LG+ +H  + K +   S+  +   L+DMYAKCG ++ A  +F  M  +NL +
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           WN ++SG   +G    A +LF  M  +G+   D  T   VL +      + +  Q     
Sbjct: 434 WNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           ++      DY ++  +  YG                         MI   A+    EEA 
Sbjct: 494 IQ------DYGISPKLQHYG------------------------CMIDLLARAEKFEEAE 523

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L   M++ E+ PD  +  SLL+AC      E G+ V   + +     +  A   L N+Y
Sbjct: 524 IL---MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLE-PENAGAFVLLSNIY 579

Query: 445 AKCGSIDDADRAFSEIPDRGI 465
           A  G  DD  R  + + D+G+
Sbjct: 580 AGAGRWDDVARIRTRLNDKGM 600



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 232/507 (45%), Gaps = 44/507 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPER---SVVSWNSLFSC 70
           Q+H +++ TG ++  FV + L+   A    G+   +  LF+   +    +V  WNSL   
Sbjct: 46  QIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRG 105

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y        ++  F  M+  G++PN  +   +  +C  +  +  G+++H +++KL    +
Sbjct: 106 YSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFN 165

Query: 131 MFSANALVDMYAKVGN-------------------------------LEDAVAVFKDIEH 159
                +++ MYA VG                                L+DA  +F +I  
Sbjct: 166 PHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPV 225

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D+VSWNA+I+G V     + A+  F +M+ + + PN  T    L AC      ELG+ +
Sbjct: 226 KDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWI 285

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
              +      S+  +   L+DMY KCG  D AR +F  + EK++I+WN +I G+      
Sbjct: 286 GSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLY 345

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD-YIVNS 338
            EA +LF  M R  V  +  T   +L + A   A+ + K VHA   K    S +  +  S
Sbjct: 346 EEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTS 405

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-NP 397
           LID Y KCG +E A ++F+   + +L +  +M++ +A  G  E AL L+ EM ++ +  P
Sbjct: 406 LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRP 465

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           D      +L+AC      + G Q    +I+ +G          ++++ A+    ++A+  
Sbjct: 466 DDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL 525

Query: 457 FSEI---PDRGIVSWSAMIGGLAQHGR 480
              +   PD  I  W +++     HGR
Sbjct: 526 MKNMEMEPDGAI--WGSLLSACKAHGR 550



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 8/294 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC   +   LG  +   V   GF S+  + N+L+ MY KCG    +R LFD I E+ 
Sbjct: 269 VLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SWN++   Y +    EEA+  F+ M+ S ++PN+ +   +++ACA  G   LG+ +H 
Sbjct: 329 VISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHA 388

Query: 121 YSIK-LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           Y  K L   S+     +L+DMYAK G +E A  VF+ +   ++ SWNA+++G  +H H +
Sbjct: 389 YIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAE 448

Query: 180 WALKLFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG- 237
            AL LF +M +  +  P+  T+   L AC    L +LG Q   S+I+    S  +   G 
Sbjct: 449 RALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGC 508

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNG----GDMEAASLF 286
           ++D+ A+    +EA ++   M  E +   W  ++S    +G    G+  A  LF
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLF 562



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 130/302 (43%), Gaps = 38/302 (12%)

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLID--AYGKCGHVEDAVKIFKESS---AVDLVA 366
           + I   KQ+H+L +KT   +  ++ + LI   A    G +  A+ +F+E+      ++  
Sbjct: 39  KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFI 98

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             S+I  Y+       +L L+  M    + P+S     L  +C    A  +GKQ+H H +
Sbjct: 99  WNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHAL 158

Query: 427 KFGFMSDTFAGNSLVNMYAKCGS-------------------------------IDDADR 455
           K     +     S+++MYA  G                                +DDA R
Sbjct: 159 KLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARR 218

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F EIP + +VSW+AMI G  Q GR +EA+  F +M E  VLPN  T+V VL AC H   
Sbjct: 219 LFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHT-R 277

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
             E      S  +  G     +    +ID+  + G+   A EL D +  + +   W  ++
Sbjct: 278 SGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE-EKDVISWNTMI 336

Query: 576 GA 577
           G 
Sbjct: 337 GG 338


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/635 (39%), Positives = 368/635 (57%), Gaps = 34/635 (5%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+  YA  G       +F +I   ++V +N +I   V +     AL +F+ M +    P+
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            +TY   LKAC+      +G Q+H +++K+ +  +  +G GLV MY KC  +D AR +  
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP +++++WN +++G+ QNG   +A  L   M    +  D  T+ ++L +V +      
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTS---- 252

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
           C  V  L VK  F                       VK+ ++S    L++   MI  Y  
Sbjct: 253 CDNV--LYVKDMF-----------------------VKLKEKS----LISWNVMIAVYVN 283

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             +  EA+ LYL+MQ   + PD+   SS+L AC +LSA   G+++H ++ +     +   
Sbjct: 284 NAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLL 343

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            N+L++MYAKCG + +A   F ++  R +VSW++MI      G+GK+A+ +F +M + G 
Sbjct: 344 ENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGF 403

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ I  VSVL AC+HAGLV E ++ F  M + +GI P  EHY CM+D+LGRAGK  EA 
Sbjct: 404 TPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEAY 462

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
            L   MP + N  VWG+LL A R+Y ++ +   AA+ LF + PE+S  +VLLSNIYA AG
Sbjct: 463 HLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAG 522

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W +V  VR  M    +KK PG S +E+ D VYTF  GD+SH +SKEIY  L  +   + 
Sbjct: 523 RWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMK 582

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + GY+P  ++ LHDVEE +KE  L  HSEKLA+ F ++ T PG+TIR+ KN+R+C DCH 
Sbjct: 583 ELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHV 642

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + + ISKI  REII+RD +RFHHFR+G CSCG YW
Sbjct: 643 ATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 157/345 (45%), Gaps = 77/345 (22%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVA--------------------------- 33
           VLKAC+   +L++GLQ+HG VV  G D + ++                            
Sbjct: 143 VLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRD 202

Query: 34  ----NSLVVMYAKCGNFIDSRRL------------------------------------- 52
               NS+V  YA+ G F D+ +L                                     
Sbjct: 203 MVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDM 262

Query: 53  FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
           F  + E+S++SWN + + YV+     EAV  + +M + G+ P+  S+SS++ AC     +
Sbjct: 263 FVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAA 322

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           +LGR+IH Y  +     ++   NAL+DMYAK G L++A AVF  +   D+VSW ++I+  
Sbjct: 323 VLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAY 382

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            +      A+ LF++M+ S   P+   + S L AC+   L + GR  +C  +  E    P
Sbjct: 383 GMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGR--YCFNLMAEYGITP 440

Query: 233 IVGVG----LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
             G+     +VD+  + G +DEA  +   MP E N   W  ++S 
Sbjct: 441 --GIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 5/191 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC       LG ++H  V       +  + N+L+ MYAKCG   ++R +FD +  R 
Sbjct: 312 VLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRD 371

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S Y      ++AV  FK+M  SG  P+  +  S++ AC+ +G    GR    
Sbjct: 372 VVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFN 431

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
              + G    +   N +VD+  + G +++A  + + +   P+   W ++++ C ++   +
Sbjct: 432 LMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMN 491

Query: 180 WAL----KLFQ 186
            AL     LFQ
Sbjct: 492 IALLAADHLFQ 502


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/643 (37%), Positives = 377/643 (58%), Gaps = 8/643 (1%)

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW-ALKLFQQMKS-SE 192
           N+LV +Y K G L  A  +F  +   ++VSWN ++AG  LH  N    L LF+ M S   
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAG-YLHGGNHLEVLVLFKNMVSLQN 112

Query: 193 INPNMFTYTSALKACA-GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
             PN + +T+AL AC+ G  +KE G Q H  L K  +     V   LV MY++C  ++ A
Sbjct: 113 ACPNEYVFTTALSACSHGGRVKE-GMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELA 171

Query: 252 RMIFHLMPEK---NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
             +   +P +   ++ ++N V++  +++G   EA  +   M  E V +D  T   V+   
Sbjct: 172 LQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLC 231

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A  + + +  +VHA  ++     D+++ + LID YGKCG V +A  +F      ++V  T
Sbjct: 232 AQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +++TAY Q G  EE+L L+  M      P+ +  + LLNACA ++A   G  +H  + K 
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           GF +     N+L+NMY+K GSID +   F+++  R I++W+AMI G + HG GK+ALQ+F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             M+     PN++T + VL A +H GLV E  ++   + + F I+P  EHY CM+ +L R
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AG   EA   + T   + +   W  LL A  +++N ++G+  AE +  ++P    T+ LL
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLL 531

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SN+YA A  WD V  +R+ M++  +KKEPG SW+++++ ++ F     +H  S +IY K+
Sbjct: 532 SNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKV 591

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
            ++  L+   GYVP + + LHDVE+ +KE  L +HSEKLA+A+GL+  P  A IR+ KNL
Sbjct: 592 QQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNL 651

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+C DCHT+ + ISK+ +R IIVRD NRFHHFR+GSC+C  +W
Sbjct: 652 RMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 235/451 (52%), Gaps = 6/451 (1%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGI 92
           NSLV +Y KCG    +R LFDA+P R+VVSWN L + Y+H     E +  FK MV L   
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
            PNE+  ++ ++AC+  G    G + HG   K G     +  +ALV MY++  ++E A+ 
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 153 VFKDI--EH-PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           V   +  EH  DI S+N+V+   V     + A+++ ++M    +  +  TY   +  CA 
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +LG ++H  L++  +  D  VG  L+DMY KCG +  AR +F  +  +N++ W  +
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ++ +LQNG   E+ +LF  M REG   ++ T + +L + A   A+     +HA   K  F
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           ++   + N+LI+ Y K G ++ +  +F +    D++   +MI  Y+  GLG++AL+++ +
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCG 448
           M   E  P+      +L+A ++L   ++G     H+++ F           +V + ++ G
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAG 473

Query: 449 SIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
            +D+A+        +  +V+W  ++     H
Sbjct: 474 LLDEAENFMKTTQVKWDVVAWRTLLNACHVH 504



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 156/284 (54%), Gaps = 5/284 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C   +DL LGL+VH  ++  G   DEFV + L+ MY KCG  +++R +FD +  R+
Sbjct: 227 VMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRN 286

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV W +L + Y+   + EE++  F  M   G  PNE++ + ++NACAG      G  +H 
Sbjct: 287 VVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHA 346

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              KLG+ + +   NAL++MY+K G+++ +  VF D+ + DI++WNA+I G   H     
Sbjct: 347 RVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQ 406

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           AL++FQ M S+E  PN  T+   L A + + L + G      L++   K +P +     +
Sbjct: 407 ALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMR-NFKIEPGLEHYTCM 465

Query: 239 VDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISG-HLQNGGDM 280
           V + ++ G +DEA         K +++AW  +++  H+    D+
Sbjct: 466 VALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDL 509



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 215/467 (46%), Gaps = 37/467 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC+    +  G+Q HG++   G    ++V ++LV MY++C +   + ++ D +P   V
Sbjct: 124 LSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHV 183

Query: 62  ---VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
               S+NS+ +  V     EEAV   + MV   +  +  +   ++  CA   D  LG ++
Sbjct: 184 NDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRV 243

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   ++ G   D F  + L+DMY K G + +A  VF  +++ ++V W A++   + + + 
Sbjct: 244 HARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYF 303

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + +L LF  M      PN +T+   L ACAG+     G  LH  + K+  K+  IV   L
Sbjct: 304 EESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNAL 363

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           ++MY+K GS+D +  +F  M  +++I WN +I G+  +G   +A  +F  M       + 
Sbjct: 364 INMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNY 423

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL   +++  +G+        VK  F    Y +N L+             + FK 
Sbjct: 424 VTFIGVL---SAYSHLGL--------VKEGF----YYLNHLM-------------RNFKI 455

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
              ++   C  M+   ++ GL +EA      M+  ++  D     +LLNAC     Y+ G
Sbjct: 456 EPGLEHYTC--MVALLSRAGLLDEAENF---MKTTQVKWDVVAWRTLLNACHVHRNYDLG 510

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +++   +++     D      L NMYAK    D        + +R I
Sbjct: 511 RRIAESVLQMD-PHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNI 556


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/531 (42%), Positives = 334/531 (62%), Gaps = 1/531 (0%)

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           M+ KCG M +AR +F  MPE+NL++WN +ISG +  G  MEA  LF  M+ E       T
Sbjct: 19  MHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFT 78

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            + ++++ A  + I + +Q+HA ++K     D ++  +LID Y KCG +EDA  +F+E  
Sbjct: 79  FAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMP 138

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
               V   ++I  YA  G  EEAL +Y EM+D  +  D F  S ++  CA L++ E  KQ
Sbjct: 139 EKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQ 198

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H  +I+ GF SD  A  +LV+ Y+K G I+DA   F ++  + ++SW+A+IGG   HGR
Sbjct: 199 AHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGR 258

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G EA+++F QM+++ + PNHIT ++VL AC+H+GL       F+SM +   I+P   HYA
Sbjct: 259 GSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYA 318

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMI+++GR G   EA+ L+   PF+  A++W ALL A R+ +N E+G+ AAE L+ +EP+
Sbjct: 319 CMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPD 378

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           K + +++L NIY SAG     A V   +K   L+  P  SWIEVK + + F  GD  H +
Sbjct: 379 KLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQ 438

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
            KEIY K+D++   ++K GYVP  +T L DV+E E+   LY HSEKLA+AFGLI+TP  A
Sbjct: 439 RKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLY-HSEKLAIAFGLISTPYWA 497

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +++ +  RIC DCH + + I+++  REI++RD  RFHHF++G CSC  YW
Sbjct: 498 PLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 246/498 (49%), Gaps = 52/498 (10%)

Query: 24  TGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF 83
            GF+ D+++ N +++M+ KCG  ID+RRLFD +PER++VSWN++ S  V      EA   
Sbjct: 4   NGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRL 63

Query: 84  FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           F  M         F+ + MI A AG     +GR++H  ++K+G   D+F + AL+DMY+K
Sbjct: 64  FLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSK 123

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G++EDA  VF+++     V WN +IAG  LH +++ AL ++ +M+ S +  + FT++  
Sbjct: 124 CGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMI 183

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           ++ CA +   E  +Q H +LI+    SD +    LVD Y+K G +++AR +F  M  KN+
Sbjct: 184 VRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNV 243

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           I+WN +I G+  +G   EA  LF  M +E +  +  T   VL + +           H+ 
Sbjct: 244 ISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACS-----------HSG 292

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
             +  +E        +  + G+   ++     +         AC  MI    + GL +EA
Sbjct: 293 LSERGWE--------IFQSMGRDNRIKPRAMHY---------AC--MIELMGREGLLDEA 333

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN-SLVN 442
           L L   ++     P + + ++LL AC     +E GK     +  +G   D       L+N
Sbjct: 334 LAL---IRGAPFKPTANMWAALLTACRVNENFELGKFAAEKL--YGMEPDKLNNYIVLLN 388

Query: 443 MYAKCGSIDDADRAFSEIPDRG-----IVSW-------SAMIGGLAQHGRGKEALQMFGQ 490
           +Y   G++ +A      +  +G     + SW          + G  +H + KE  Q   +
Sbjct: 389 IYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDK 448

Query: 491 MLED----GVLPNHITLV 504
           ++ +    G +PN  TL+
Sbjct: 449 LMLEISKYGYVPNQKTLL 466



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 145/262 (55%), Gaps = 1/262 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++A    + + +G Q+H   +  G   D FV+ +L+ MY+KCG+  D+R +F+ +PE++
Sbjct: 82  MIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKT 141

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN++ + Y    + EEA+  + EM  SG++ + F+ S ++  CA        ++ H 
Sbjct: 142 TVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHA 201

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I+ G+ SD+ +  ALVD Y+K G +EDA  VF  +   +++SWNA+I G   H     
Sbjct: 202 ALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSE 261

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
           A++LF+QM    +NPN  T+ + L AC+   L E G ++  S+ +   IK   +    ++
Sbjct: 262 AVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMI 321

Query: 240 DMYAKCGSMDEARMIFHLMPEK 261
           ++  + G +DEA  +    P K
Sbjct: 322 ELMGREGLLDEALALIRGAPFK 343



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 12/316 (3%)

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +   FE D Y+ N ++  + KCG + DA ++F E    +LV+  ++I+     G   EA 
Sbjct: 2   IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAF 61

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           +L+L M +   +  SF  + ++ A A L     G+Q+H   +K G   D F   +L++MY
Sbjct: 62  RLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMY 121

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCGSI+DA   F E+P++  V W+ +I G A HG  +EAL M+ +M + GV  +H T  
Sbjct: 122 SKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFS 181

Query: 505 SVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
            ++  C     V  AK  H   +   FG   +      ++D   + G+ ++A  + D M 
Sbjct: 182 MIVRICARLASVEHAKQAHAALIRHGFGSDIVAN--TALVDFYSKWGRIEDARHVFDKMA 239

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYAS---AGMWD 619
              N   W AL+G    Y N   G  A E+   +  E+ +  H+    + ++   +G+ +
Sbjct: 240 -SKNVISWNALIGG---YGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSE 295

Query: 620 NVAKVRRFM-KDNKLK 634
              ++ + M +DN++K
Sbjct: 296 RGWEIFQSMGRDNRIK 311



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           +I  GF  D +  N ++ M+ KCG + DA R F E+P+R +VSW+ +I GL   G   EA
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
            ++F  M E+       T   ++ A     L++  +    +   K GI         +ID
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGR-QLHACTLKMGIGDDIFVSCALID 119

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +  + G  ++A  + + MP +     W  ++  
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKTTVG-WNTIIAG 151


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/555 (39%), Positives = 342/555 (61%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           RQ+H  +       +  V   L+ MY + G++++A+ +F  M +++  +W++++ G+ + 
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G       +F  + R G   D  +   V+++    + +   + +H +++K   +   ++ 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            +L+D Y +C  VEDA +IF +    DL   T MI A A+ G+  E+L  +  M+++ I 
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD     +++ ACA L A  + K +H +I   G+  D   G ++++MYAKCGS++ A   
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +  R +++WSAMI     HG+G++AL++F  ML  G+LPN IT VS+L AC+HAGL+
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLI 369

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
            E +  F SM  ++G+ P  +HY CM+D+LGRAG+  EA+E+++ MP + +  +WGALLG
Sbjct: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLG 429

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A RI++++++ +  A  L  ++ +K   +VLLSNIYA+AG W+++AK R  M    L+K 
Sbjct: 430 ACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKI 489

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           PG +WIEV +K+Y F VGD++H RS EIY  L  + + L  AGY P     L+DV+E  K
Sbjct: 490 PGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVK 549

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           + LLY HSEKLA+AFGL+  P G  IR+ KNLR+C DCHT  +F+S I  + IIVRD  R
Sbjct: 550 QGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKR 609

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF+ G CSC  YW
Sbjct: 610 FHHFKEGVCSCRDYW 624



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 214/488 (43%), Gaps = 49/488 (10%)

Query: 7   SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS 66
           S ++LF   QVH  +   G   +  VAN L+ MY + G   D++ LFD + +R   SW+ 
Sbjct: 62  SCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSV 121

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           +   Y            F+E++ SG   +++S   +I AC    D   GR IH  ++K G
Sbjct: 122 IVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCG 181

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
            D   F    LVDMYA+   +EDA  +F  +   D+ +W  +I           +L  F 
Sbjct: 182 LDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFD 241

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M++  I P+     + + ACA +      + +H  +       D I+G  ++DMYAKCG
Sbjct: 242 RMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCG 301

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           S++ AR IF  M  +N+I W+ +I+ +  +G   +A  LFP M R G+  ++ T  ++L 
Sbjct: 302 SVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLL- 360

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                         +A S     E      +S+ D YG    V   VK +          
Sbjct: 361 --------------YACSHAGLIEEGQRFFSSMWDEYG----VTPDVKHY---------- 392

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T M+    + G  +EAL++   ++   +  D  +  +LL AC      +  ++V   ++
Sbjct: 393 -TCMVDLLGRAGRLDEALEM---IEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLL 448

Query: 427 KFGFMSDTFAGNS--LVNMYAKCGSIDDADR--------AFSEIPDRGIVSWSAMIGGLA 476
           K   +     G+   L N+YA  G  +D  +           +IP R   +W  +   L 
Sbjct: 449 K---LQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGR---TWIEVGEKLY 502

Query: 477 QHGRGKEA 484
           Q G G + 
Sbjct: 503 QFGVGDKT 510



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 190/393 (48%), Gaps = 3/393 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R++H      G   ++  AN L+ MY + G LEDA  +F  +      SW+ ++ G    
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            +      +F+++  S    + ++    ++AC  ++  + GR +HC  +K  +     V 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LVDMYA+C  +++A  IF  M +++L  W ++I    ++G  +E+   F  M  +G+ 
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D+  L TV+ + A   A+   K +HA    T +  D  +  ++ID Y KCG VE A  I
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      +++  ++MI AY   G GE+AL+L+  M    I P+     SLL AC++    
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLI 369

Query: 416 EQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
           E+G++    +  ++G   D      +V++  + G +D+A      +P ++  V W A++G
Sbjct: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLG 429

Query: 474 GLAQHGRGKEALQMFGQMLE-DGVLPNHITLVS 505
               H     A ++   +L+     P H  L+S
Sbjct: 430 ACRIHRHLDLAERVARSLLKLQSQKPGHYVLLS 462



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 141/272 (51%), Gaps = 2/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC   KDL  G  +H I +  G D   FV  +LV MYA+C    D+ ++F  + +R 
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRD 216

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +W  +           E++ FF  M   GI P++ +L +++ ACA  G     + IH 
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y    GY  D+    A++DMYAK G++E A  +F  ++  ++++W+A+IA    H   + 
Sbjct: 277 YINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEK 336

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLV 239
           AL+LF  M  S I PN  T+ S L AC+   L E G++   S+  +  +  D      +V
Sbjct: 337 ALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMV 396

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           D+  + G +DEA  +   MP EK+ + W  ++
Sbjct: 397 DLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           SSLL +C NL    Q +QVH  I   G   +    N L+ MY + G+++DA   F  +  
Sbjct: 58  SSLL-SCRNLF---QVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSK 113

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           R   SWS ++GG A+ G       MF ++L  G   +  +   V+ AC     + +    
Sbjct: 114 RHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDL-KCGRL 172

Query: 523 FESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
              +  K G+     H+ C  ++D+  R    ++A ++   M ++ + + W  ++GA   
Sbjct: 173 IHCITLKCGLD--YGHFVCATLVDMYARCKVVEDAHQIFVKM-WKRDLATWTVMIGAL-- 227

Query: 581 YKNVEVGQHAAEMLF-------AIEPEKSSTHVLLSNIYASAGM 617
               E G     ++F        I P+K +   L++ +YA A +
Sbjct: 228 ---AESGVPVESLVFFDRMRNQGIVPDKVA---LVTVVYACAKL 265


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/636 (38%), Positives = 377/636 (59%), Gaps = 11/636 (1%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++  Y +   L DA+ +F ++   D+VSWN++I+GCV     D A+K+F +M    +   
Sbjct: 72  MISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSV--- 128

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             ++T+ +  C    + +   +L C   +M +K D      +V  Y + G +D+A  +F 
Sbjct: 129 -VSWTAMVNGCFRFGMVDQAERLFC---QMPVK-DIAAWNAMVHGYLQFGKVDDALKLFK 183

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP KN+I+W  +I G  QN    EA +LF  M R  +     T + V+ + A+  A  +
Sbjct: 184 QMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHM 243

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
             QVH   +K+ F  ++Y+  SLI  Y  C   ED+ K+F E     +   T++++ Y+ 
Sbjct: 244 GTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSL 303

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
               E+AL ++ EM    I P+    +S LN+C+ L   + GK++H   +K G  +  F 
Sbjct: 304 NRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFV 363

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           GNSLV MY+  G+++DA   F EI  + IVSW+++I G AQHGRGK A  +FGQM+    
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG-IQPMQEHYACMIDILGRAGKFQEA 555
            P+ IT   +L AC+H G + + +  F  +      I    +HY CM+DILGR G+ +EA
Sbjct: 424 EPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEA 483

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            +L+++M  + N  VW ALL A R++ +V+ G+ AA  +F ++ + S+ +VLLSNIYASA
Sbjct: 484 EKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASA 543

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G W +V+K+R  MK   + K+PG SW+ ++ K + F  GDR H     I+ KL+ + + L
Sbjct: 544 GRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCL--RIFEKLEFLREKL 601

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            + GYVP   + LHDVE+ +KE++L++HSE+LA+AFGLI T  G+T+ V KNLR+C DCH
Sbjct: 602 KELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCH 661

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T  + IS++V  +I++RD  RFHHF+NG CSCG YW
Sbjct: 662 TVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 226/472 (47%), Gaps = 42/472 (8%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           Y +    +D+  LFD +P R VVSWNS+ S  V C  ++ AV  F EM    +     S 
Sbjct: 76  YTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSV----VSW 131

Query: 100 SSMINACAGSGDSLLGRKIH-GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           ++M+N C   G      ++     +K     D+ + NA+V  Y + G ++DA+ +FK + 
Sbjct: 132 TAMVNGCFRFGMVDQAERLFCQMPVK-----DIAAWNAMVHGYLQFGKVDDALKLFKQMP 186

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             +++SW  +I G   +E +  AL LF+ M    I     T+T  + ACA      +G Q
Sbjct: 187 RKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQ 246

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +IK     +  V   L+ +YA C   +++R +F  M  + +  W  ++SG+  N  
Sbjct: 247 VHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRK 306

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             +A ++F  M R  +  +Q+T ++ L S ++   +   K++H ++VK    +  ++ NS
Sbjct: 307 HEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNS 366

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y   G+V DAV +F E     +V+  S+I   AQ G G+ A  ++ +M      PD
Sbjct: 367 LVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
               + LL+AC++    ++G+++  +I            +S +N                
Sbjct: 427 EITFTGLLSACSHCGFLQKGRKLFYYI------------SSGLNHI-------------- 460

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
              DR I  ++ M+  L + G  KEA ++   M+   V PN +  +++L AC
Sbjct: 461 ---DRKIQHYTCMVDILGRCGELKEAEKLIESMV---VKPNEMVWLALLSAC 506



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 7/293 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC +     +G QVHG ++ +GF  +E+V  SL+ +YA C    DSR++F  +    
Sbjct: 231 VITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEK 290

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  W +L S Y      E+A+  F EM+ + I PN+ + +S +N+C+  G    G++IHG
Sbjct: 291 VAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHG 350

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++KLG  +  F  N+LV MY+  GN+ DAV+VF +I    IVSWN++I GC  H    W
Sbjct: 351 VAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKW 410

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           A  +F QM      P+  T+T  L AC+     + GR+L   +       D  +     +
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCM 470

Query: 239 VDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISGHLQNG----GDMEAASLF 286
           VD+  +CG + EA ++I  ++ + N + W  ++S    +     G+  AA++F
Sbjct: 471 VDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 212/448 (47%), Gaps = 44/448 (9%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N++V  Y + G   D+ +LF  +P ++V+SW ++       +   EA+  FK M+   I+
Sbjct: 163 NAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIK 222

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
               + + +I ACA +    +G ++HG+ IK G+  + +   +L+ +YA     ED+  V
Sbjct: 223 STSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKV 282

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F ++ H  +  W A+++G  L+  ++ AL +F +M  + I PN  T+ S L +C+ +   
Sbjct: 283 FGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTL 342

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           + G+++H   +K+ + +   VG  LV MY+  G++++A  +F  + +K++++WN +I G 
Sbjct: 343 DWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGC 402

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            Q+G    A  +F  M R     D+ T + +L + +    +   +++           D 
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDR 462

Query: 334 YI--VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            I     ++D  G+CG +++A K+ +           SM+                    
Sbjct: 463 KIQHYTCMVDILGRCGELKEAEKLIE-----------SMV-------------------- 491

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV-NMYAKCGSI 450
              + P+  V  +LL+AC   S  ++G++    I  F   S + A   L+ N+YA  G  
Sbjct: 492 ---VKPNEMVWLALLSACRMHSDVDRGEKAAAAI--FNLDSKSSAAYVLLSNIYASAGRW 546

Query: 451 DDADRAFSEIPDRGIV-----SWSAMIG 473
               +   ++  +GI+     SW  + G
Sbjct: 547 SSVSKLRVKMKQKGIMKKPGSSWVVIRG 574



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 150/297 (50%), Gaps = 25/297 (8%)

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQTT------ 300
           +DEAR +F  +P  ++  +  +ISG+ ++   ++A +LF  M  R+ V ++         
Sbjct: 51  LDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVEC 110

Query: 301 --LSTVLK--------SVASFQAI-------GVCKQVHALSVKTAFESDDYIVNSLIDAY 343
             + T +K        SV S+ A+       G+  Q   L  +   + D    N+++  Y
Sbjct: 111 GDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVK-DIAAWNAMVHGY 169

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            + G V+DA+K+FK+    ++++ T+MI    Q     EAL L+  M    I   S   +
Sbjct: 170 LQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFT 229

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
            ++ ACAN  A+  G QVH  IIK GF+ + +   SL+ +YA C   +D+ + F E+   
Sbjct: 230 CVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHE 289

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            +  W+A++ G + + + ++AL +F +M+ + +LPN  T  S L +C+  G +   K
Sbjct: 290 KVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGK 346



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 18/255 (7%)

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           +   +I  Y +   + DA+ +F E    D+V+  SMI+   + G  + A+K++ EM +R 
Sbjct: 68  LYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERS 127

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           +       ++++N C      +Q +++   +     + D  A N++V+ Y + G +DDA 
Sbjct: 128 V----VSWTAMVNGCFRFGMVDQAERLFCQMP----VKDIAAWNAMVHGYLQFGKVDDAL 179

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           + F ++P + ++SW+ MI GL Q+ R  EAL +F  ML   +     T   V+ AC +A 
Sbjct: 180 KLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANA- 238

Query: 515 LVAEAKHHFESMEKKFGIQP--MQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASV 570
                  H  +    F I+   + E Y  A +I +     + +++ ++   M  +   +V
Sbjct: 239 ----PAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHE-KVAV 293

Query: 571 WGALLGAARIYKNVE 585
           W ALL    + +  E
Sbjct: 294 WTALLSGYSLNRKHE 308


>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g04780-like [Glycine max]
          Length = 632

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/575 (42%), Positives = 348/575 (60%), Gaps = 8/575 (1%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+ CA       GR  H  +I++ ++ D +    L++MY+KC  +   R     M  K+L
Sbjct: 57  LQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSL 116

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           I  N  I    QN  D +A  L   M RE   F++ T+S+VL + A   AI  C Q+HA 
Sbjct: 117 ILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAF 176

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S+K A +S+ ++  +L+  Y KC  ++DA ++F+     + V  +SM+  Y Q G  +EA
Sbjct: 177 SIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEA 236

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+   Q    + D F  SS ++ACA L+   +GKQVH    K GF S+ +  +SL++M
Sbjct: 237 LLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDM 296

Query: 444 YAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           YAKCG I +A   F    + R IV W+AMI G A+H   +EA+ +F +M + G  P+ +T
Sbjct: 297 YAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVT 356

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            VSVL AC+H GL  E + +F+ M ++  + P   HY+CMIDILGRAG  Q+A +L+  M
Sbjct: 357 YVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRM 416

Query: 563 PFQANASVWGALLG-------AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            F A +S+WG++ G       + RIY N+E  + AA+ LF +EP  +  H+LL+NIYA+ 
Sbjct: 417 SFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAAN 476

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
              D VA+ R+ +++  ++KE G SWIE+K+K+++FTVG+R+H +  + YAKLD +   L
Sbjct: 477 KKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVEL 536

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            K  Y      DLHDVEES K  LL HHSEKLA+ FGL+  P    IR+ KNLRIC DCH
Sbjct: 537 KKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCH 596

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           T  + +SK  SREIIVRD NRFHHF++G CSCG +
Sbjct: 597 TFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 222/443 (50%), Gaps = 28/443 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L  ++  CA +G S+ GR  H   I++G + D+ ++  L++MY+K   +        ++
Sbjct: 52  NLHYLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEM 111

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP-NMFTYTSALKACAGMELKELG 216
               ++  N  I     +  +  ALKL  +M+  E+ P N FT +S L  CA        
Sbjct: 112 LVKSLILXNTRIGALTQNAEDRKALKLLIRMQ-REVTPFNEFTISSVLCNCAFKCAILEC 170

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
            QLH   IK  I S+  V   L+ +YAKC S+ +A  +F  MPEKN + W+ +++G++QN
Sbjct: 171 MQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 230

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA  LF      G   D   +S+ + + A    +   KQVHA+S K+ F S+ Y+ 
Sbjct: 231 GFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVA 290

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
           +SLID Y KCG + +A  +F+    V  +V   +MI+ +A+  L +EA+ L+ +MQ R  
Sbjct: 291 SSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGF 350

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDAD 454
            PD     S+LNAC+++  +E+G++    +++   +S +    S ++++  + G +    
Sbjct: 351 FPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV---Q 407

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRG-----KEALQMFGQM------------LEDGVL 497
           +A+  I      + S+M G +    RG     K + +++G +            +E    
Sbjct: 408 KAYDLIGRMSFNATSSMWGSV----RGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNA 463

Query: 498 PNHITLVSVLCACNHAGLVAEAK 520
            NHI L ++  A   +  VA A+
Sbjct: 464 GNHILLANIYAANKKSDEVARAR 486



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 146/253 (57%), Gaps = 2/253 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C  K  +   +Q+H   +    DS+ FV  +L+ +YAKC +  D+ ++F+++PE++
Sbjct: 157 VLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKN 216

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W+S+ + YV   F +EA+  F    L G   + F++SS ++ACAG    + G+++H 
Sbjct: 217 AVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHA 276

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD-IEHPDIVSWNAVIAGCVLHEHND 179
            S K G+ S+++ A++L+DMYAK G + +A  VF+  +E   IV WNA+I+G   H    
Sbjct: 277 MSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQ 336

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-L 238
            A+ LF++M+     P+  TY S L AC+ M L E G++    +++    S  ++    +
Sbjct: 337 EAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCM 396

Query: 239 VDMYAKCGSMDEA 251
           +D+  + G + +A
Sbjct: 397 IDILGRAGLVQKA 409



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 172/354 (48%), Gaps = 2/354 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C        G   H  ++  G + D   +  L+ MY+KC     +R+  D +  +S
Sbjct: 56  LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++  N+            +A+     M       NEF++SS++  CA     L   ++H 
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHA 175

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +SIK   DS+ F   AL+ +YAK  +++DA  +F+ +   + V+W++++AG V +  +D 
Sbjct: 176 FSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDE 235

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF   +    + + F  +SA+ ACAG+     G+Q+H    K    S+  V   L+D
Sbjct: 236 ALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLID 295

Query: 241 MYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           MYAKCG + EA ++F    E ++++ WN +ISG  ++    EA  LF  M + G   D  
Sbjct: 296 MYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDV 355

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-LIDAYGKCGHVEDA 352
           T  +VL + +        ++   L V+    S   +  S +ID  G+ G V+ A
Sbjct: 356 TYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKA 409



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 2/173 (1%)

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           LL  CA   +   G+  H  II+ G   D      L+NMY+KC  +    +   E+  + 
Sbjct: 56  LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           ++  +  IG L Q+   ++AL++  +M  +    N  T+ SVLC C     + E      
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECM-QLH 174

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           +   K  I         ++ +  +    ++A ++ ++MP + NA  W +++  
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAG 226


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/693 (35%), Positives = 397/693 (57%), Gaps = 5/693 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDE--FVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +L+ C   + L     VHG ++ + F +     + N +   Y+KC +   + RLFD + +
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+  SW  L +         +   FF EM   GI P++F+ S ++  C G     LG  +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +  G+ S  F + AL++MYAK+  +ED+  VF  +   ++VSWNA+I G   ++  
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A  LF +M    + P+  T+    KA   +      +++    +++ + S+ +VG  L
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313

Query: 239 VDMYAKCGSMDEARMIF--HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           +DM +KCGS+ EAR IF  H +  +    WN +ISG+L++G + +A  LF  M +  +  
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKI 355
           D  T  +V  ++A+ + + + K+VHA ++K+  E +   I N++ +AY KCG +ED  K+
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKV 433

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      DL++ TS++TAY+Q    ++A++++  M+   I P+ F  SS+L +CANL   
Sbjct: 434 FNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLL 493

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           E G+QVH  I K G   D    ++LV+MYAKCG + DA + F+ I +   VSW+A+I G 
Sbjct: 494 EYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGH 553

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQHG   +ALQ+F +M++ GV PN +T + VL AC+H GLV E   +F+ M+K +G+ P 
Sbjct: 554 AQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPE 613

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYAC++D+L R G   +AME +  MP + N  VW  LLGA R++ NVE+G+ AA+ + 
Sbjct: 614 MEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKIL 673

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           + + E S+T+VLLSN Y  +G + +   +R  MK+  +KKEPG SWI V   ++ F  GD
Sbjct: 674 SFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGD 733

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           + H    +IYAKL+E+   L     VP +  +L
Sbjct: 734 QQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/647 (39%), Positives = 382/647 (59%), Gaps = 54/647 (8%)

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           S++ S+N ++  + + G+L  A+ VF+ +     V+WN+++AG   + +    +K+ +Q+
Sbjct: 3   SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAG---YSNRRGKIKVARQL 59

Query: 189 KSSEINPNMFTYTSALKAC----AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
                 P++F+Y   L AC    A +E   L         +M +K D      ++  +++
Sbjct: 60  FDRIPEPDIFSYNIML-ACYLHNADVESARL------FFDQMPVK-DTASWNTMISGFSQ 111

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G MD+AR +F +MP +N ++WN +ISG++++G    A  LF                  
Sbjct: 112 NGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFE--------------VAP 157

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           ++SV ++ A                         +I  + K G +E A K F+E    +L
Sbjct: 158 VRSVVAWTA-------------------------MITGFMKFGKIELAEKYFEEMPMKNL 192

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V   +MI  Y +    E  LKL+  M +    P+    SS+L  C+NLSA + GKQVH  
Sbjct: 193 VTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQL 252

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           I K     +  AG SL++MY KCG ++DA + F  +P + +V+W+AMI G AQHG G++A
Sbjct: 253 ICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKA 312

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           L +F +M ++G+ P+ IT V+VL ACNHAG V     +F SM + +G++   +HY C++D
Sbjct: 313 LYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVD 372

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGR GK  EA++L+  MPF+ +++++G LLGA RI+KN+E+ + AA+ L  ++PE ++ 
Sbjct: 373 LLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAG 432

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           +V L+N+YA+   WD+VA VRR MKDNK+ K PG SWIEVK  V+ F  GDR H     I
Sbjct: 433 YVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFI 492

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           + KL+E+   +  AGYVP +E  LHDV E +K+Q+L  HSEKLA+A+GLI  P G  IRV
Sbjct: 493 HEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRV 552

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH++ ++IS I  R IIVRD  RFHHFR G CSCG YW
Sbjct: 553 FKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 182/355 (51%), Gaps = 35/355 (9%)

Query: 34  NSLVVMYA-KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM----- 87
           NS++  Y+ + G    +R+LFD IPE  + S+N + +CY+H   +E A  FF +M     
Sbjct: 40  NSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDT 99

Query: 88  -----VLSG---------------IRP--NEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
                ++SG               + P  N  S ++MI+    SGD  L +++     ++
Sbjct: 100 ASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQL----FEV 155

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
                + +  A++  + K G +E A   F+++   ++V+WNA+IAG + +   +  LKLF
Sbjct: 156 APVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLF 215

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
           ++M  S   PN  + +S L  C+ +   +LG+Q+H  + K  +  +   G  L+ MY KC
Sbjct: 216 KRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKC 275

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G +++A  +F +MP+K+++ WN +ISG+ Q+G   +A  LF  M  EG+  D  T   VL
Sbjct: 276 GDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVL 335

Query: 306 KSV--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            +   A F  +G+ +  +++      E+       ++D  G+ G + +AV + K+
Sbjct: 336 SACNHAGFVDLGI-EYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKK 389



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 2/179 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C++   L LG QVH ++  +    +     SL+ MY KCG+  D+ +LF  +P++ 
Sbjct: 233 VLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKD 292

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN++ S Y      E+A+  F +M   G++P+  +  ++++AC  +G   LG +   
Sbjct: 293 VVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFN 352

Query: 121 YSIK-LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
             ++  G ++       +VD+  + G L +AV + K +   P    +  ++  C +H++
Sbjct: 353 SMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKN 411


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/650 (40%), Positives = 380/650 (58%), Gaps = 60/650 (9%)

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV------IAGCVLHEHNDWAL 182
           SD+ S N  +  + +  +LE A  VF+ +     V+WN +      +AG V   H     
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAH----- 125

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLVDM 241
           +LF ++      P+  +Y   L  C    L+  G +   +   KM +K D      L+  
Sbjct: 126 ELFDKIPE----PDSVSYNIML-VCY---LRSYGVEAALAFFNKMPVK-DIASWNTLISG 176

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           +A+ G M +A  +F +MPEKN ++W+ +ISG++++G D+EAA     +Y+  VG      
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG-DLEAAEE---LYK-NVG------ 225

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
              +KSV                V+TA          ++  Y K G VE A +IF+  + 
Sbjct: 226 ---MKSVV---------------VETA----------MLTGYMKFGKVELAERIFQRMAV 257

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            +LV   SMI  Y +    E+ LK++  M +  + P+    SS+L  C+NLSA   G+Q+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  + K     DT A  SL++MY KCG +D A + F E+P + ++SW+AMI G AQHG G
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAG 377

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           ++AL +F +M    + P+ IT V+V+ ACNHAG V     +F+SM+K+FGI+    HY C
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           +ID+LGRAG+  EA+ L+  MPF+ +A+++G LLGA RI+KN+++ + AA  L  ++P  
Sbjct: 438 VIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTS 497

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           ++ +V L+NIYA+   WD VAKVR+ MK++ + K PG SWIE+K   + F   DR H   
Sbjct: 498 ATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPEL 557

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
             I+ KL+E+   +  AGYVP +E  LHDVEE  KE+LL  HSEKLA+AFGL+ T PG  
Sbjct: 558 TSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTP 617

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IRV KNLR+C DCH + +FIS I  REIIVRD  RFHHFRNG CSCG YW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 181/389 (46%), Gaps = 47/389 (12%)

Query: 2   LKAC--TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK-CGNFIDSRRLFDAIPE 58
           ++AC   S +++F  + V   V +          N+++  Y K  G   ++  LFD IPE
Sbjct: 84  VRACDLESARNVFEKMSVRTTVTW----------NTMLSGYTKVAGKVKEAHELFDKIPE 133

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-------------------------- 92
              VS+N +  CY+    +E A+ FF +M +  I                          
Sbjct: 134 PDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM 193

Query: 93  -RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
              N  S S+MI+     GD     +++     +G  S +    A++  Y K G +E A 
Sbjct: 194 PEKNGVSWSAMISGYVEHGDLEAAEELYK---NVGMKS-VVVETAMLTGYMKFGKVELAE 249

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F+ +   ++V+WN++IAG V +   +  LK+F+ M  S + PN  + +S L  C+ + 
Sbjct: 250 RIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLS 309

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
              LGRQ+H  + K  +  D      L+ MY KCG +D A  +F  MP K++I+WN +IS
Sbjct: 310 ALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMIS 369

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV--ASFQAIGVCKQVHALSVKTAF 329
           G+ Q+G   +A  LF  M    +  D  T   V+ +   A F  +GV +   ++  +   
Sbjct: 370 GYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGV-QYFKSMKKEFGI 428

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           E+       +ID  G+ G +++AV + KE
Sbjct: 429 EAKPVHYTCVIDLLGRAGRLDEAVSLIKE 457



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 123/231 (53%), Gaps = 1/231 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           V  +++  Y K G    + R+F  +  +++V+WNS+ + YV     E+ +  FK M+ S 
Sbjct: 231 VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESR 290

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RPN  SLSS++  C+      LGR++H    K     D  +  +L+ MY K G+L+ A 
Sbjct: 291 VRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAW 350

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F ++   D++SWNA+I+G   H     AL LF +M++  + P+  T+ + + AC    
Sbjct: 351 KLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410

Query: 212 LKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
             +LG Q   S+ K   I++ P+    ++D+  + G +DEA  +   MP K
Sbjct: 411 FVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 2/183 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C++   L LG Q+H +V  +    D     SL+ MY KCG+   + +LF  +P + 
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           V+SWN++ S Y       +A+  F +M    ++P+  +  ++I AC  +G   LG +   
Sbjct: 361 VISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFK 420

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               + G ++       ++D+  + G L++AV++ K++   P    +  ++  C +H++ 
Sbjct: 421 SMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNL 480

Query: 179 DWA 181
           D A
Sbjct: 481 DLA 483


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/574 (40%), Positives = 350/574 (60%), Gaps = 1/574 (0%)

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           + YTS L++C   +    G+QLH     + I  +  +   LV +YA   S+  AR +F  
Sbjct: 48  YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           +P++NL  WN++I G+  NG    A  L+  M   G+  D  TL  VLK+ ++  AIG  
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           + +H   +K+ +E D ++  +LID Y KCG V DA ++F +    D V   SM+ AYAQ 
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  +E++ L  EM    + P      +++++ A+++    G+++H    + GF S+    
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVK 287

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            +L++MYAKCGS+  A   F  + ++ +VSW+A+I G A HG    AL +F +M ++   
Sbjct: 288 TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-R 346

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           P+HIT V VL AC+   L+ E +  +  M + +GI P  +HY CMID+LG  G+  EA +
Sbjct: 347 PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYD 406

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
           L+  M  + ++ VWGALL + +I+ NVE+ + A E L  +EP+ S  +V+L+N+YA +G 
Sbjct: 407 LIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGK 466

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W+ V K+R+ M D ++KK    SWIEVK+KVY F  GD SH+ S  IYA+L  +  L+++
Sbjct: 467 WEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHE 526

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGY P   +  HDVEE EK  ++  HSE+LA+AFGLI+T PG  + + KNLRIC DCH +
Sbjct: 527 AGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVA 586

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +FISKI+ REI VRDVNR+H F++G CSCG +W
Sbjct: 587 IKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 239/517 (46%), Gaps = 55/517 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++C   K L  G Q+H      G   ++ +A  LV +YA   + +++R LFD IP+++
Sbjct: 53  LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQN 112

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN L   Y      + A+  + +M+  G+RP+ F+L  ++ AC+       GR IH 
Sbjct: 113 LFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHE 172

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK G++ D+F   AL+DMYAK G + DA  VF  I   D V WN+++A    + H D 
Sbjct: 173 YVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDE 232

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ++ L ++M ++ + P   T  + + + A +     GR++H    +   +S+  V   L+D
Sbjct: 233 SISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALID 292

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+  A  +F  + EK +++WN +I+G+  +G  + A  LF  M +E    D  T
Sbjct: 293 MYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRP-DHIT 351

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL + +  + +   + ++ L V+      DY +   +  Y                 
Sbjct: 352 FVGVLAACSRGRLLDEGRALYNLMVR------DYGITPTVQHY----------------- 388

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                  T MI      G  +EA  L   +++  + PDS V  +LLN+C      E  + 
Sbjct: 389 -------TCMIDLLGHCGQLDEAYDL---IRNMSVKPDSGVWGALLNSCKIHGNVELAEL 438

Query: 421 VHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VSW----- 468
               +I+   +    +GN   L NMYA+ G  +  ++    + D+ I      SW     
Sbjct: 439 ALEKLIE---LEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKN 495

Query: 469 --SAMIGGLAQHGRGK----EALQMFGQMLEDGVLPN 499
              A + G   H        E  ++ G M E G  P+
Sbjct: 496 KVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPD 532



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 206/405 (50%), Gaps = 11/405 (2%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHG--YSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
             +  +S++ +C  S     G+++H   Y + + Y+ D+  A  LV +YA   +L +A  
Sbjct: 46  THYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDL--ATKLVHLYAVSNSLLNARN 103

Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
           +F  I   ++  WN +I G   +  +D A+ L+ +M    + P+ FT    LKAC+ +  
Sbjct: 104 LFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSA 163

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              GR +H  +IK   + D  VG  L+DMYAKCG + +A  +F  +  ++ + WN +++ 
Sbjct: 164 IGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAA 223

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + QNG   E+ SL   M   GV   + TL TV+ S A    +   +++H    +  F+S+
Sbjct: 224 YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSN 283

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
           D +  +LID Y KCG V+ A+ +F+      +V+  ++IT YA  GL   AL L+ +M+ 
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMR- 342

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSID 451
           +E  PD      +L AC+     ++G+ ++  +++ +G          ++++   CG +D
Sbjct: 343 KEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD 402

Query: 452 DAD---RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           +A    R  S  PD G+  W A++     HG  + A     +++E
Sbjct: 403 EAYDLIRNMSVKPDSGV--WGALLNSCKIHGNVELAELALEKLIE 445


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/582 (39%), Positives = 363/582 (62%), Gaps = 2/582 (0%)

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           E    + TY   LK CA  +    G+++H  L+K    SD ++   L++MY KCG + EA
Sbjct: 19  ERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEA 78

Query: 252 RMIFHLMPEKN--LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           R +F  + EKN  +I+WN +I  + QNG   EA  LF  M  EGV  +Q TL   + + A
Sbjct: 79  RSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACA 138

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  +    + VHA++V    ESD  +  SL++ +GKC +V+ A  +F      +LV   +
Sbjct: 139 SLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNN 198

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+  Y+Q    ++A++++  M    + PD+    ++++ACA L+A+ +G+ VH  I   G
Sbjct: 199 MVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASG 258

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D   G ++++ Y KCG +D+A   F  +  +  V+WSA++   AQ+G   EA++++ 
Sbjct: 259 IPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYH 318

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +M++ G+  N IT + +L AC+HAG   +   +F SM + FG+ P+ EHY  +ID+LGR+
Sbjct: 319 EMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRS 378

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G+ Q + +L+++MP++ ++S W ALLGA R++ +V+ G   AE+++ ++PE S  ++LLS
Sbjct: 379 GQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLS 438

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           N+Y+S G  D   + R+ M+   + K+PG+S IEVKD+V+ F    + H +   I+A+++
Sbjct: 439 NLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIE 498

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
            +   + +AGYV  V   L DVEE EKEQLL++HSE+LA+AFGLI+TPPG  + + KNLR
Sbjct: 499 RLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLR 558

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +C DCH + + ISK+V R+I+VRD  RFHHF NG+CSCG YW
Sbjct: 559 VCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 224/469 (47%), Gaps = 38/469 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C   K L  G +VH  +V  G+ SD  +AN L+ MY KCG   ++R +FD I E++
Sbjct: 30  LLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKN 89

Query: 61  --VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
             V+SWN +   Y      +EA+  FK M L G+  N+ +L + I+ACA       GR +
Sbjct: 90  ADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIV 149

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++    +SD     +LV+M+ K  N++ A AVF  +   ++V+WN ++A    +   
Sbjct: 150 HAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQC 209

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             A+++F+ M    + P+  T+ + + ACA +     GR +H  +    I  D  +G  +
Sbjct: 210 KKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAV 269

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +  Y KCG +D AR IF  + +KN + W+ +++ + QNG + EA  L+  M + G+  + 
Sbjct: 270 MHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNG 329

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   +L + +           HA     + +  DY V S+I  +G        V +F+ 
Sbjct: 330 ITFLGLLFACS-----------HA---GRSMDGVDYFV-SMIRDFG-------VVPVFEH 367

Query: 359 S-SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
             + +DL+  +       Q  L E+ +            PDS    +LL AC      ++
Sbjct: 368 YLNLIDLLGRS------GQLQLSEDLI------NSMPYEPDSSAWLALLGACRMHGDVDR 415

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
           G ++   I +     D+     L N+Y+  G +D+A R    +  RGI 
Sbjct: 416 GARIAELIYELD-PEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGIT 463



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 4/382 (1%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--H 159
           ++  CA S   L G+++H   +K GY SD   AN L++MY K G + +A +VF  I+  +
Sbjct: 30  LLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKN 89

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            D++SWN +I     +     AL LF+ M    +  N  T  +A+ ACA +  +E GR +
Sbjct: 90  ADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIV 149

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
           H   +   ++SD +VG  LV+M+ KC ++D AR +F  +P KNL+ WN +++ + QN   
Sbjct: 150 HAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQC 209

Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            +A  +F +M  EGV  D  T  T++ + A+  A    + VH     +    D  +  ++
Sbjct: 210 KKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAV 269

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +  YGKCG +++A  IF      + V  ++++ AYAQ G   EA++LY EM    +  + 
Sbjct: 270 MHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNG 329

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                LL AC++      G    V +I+ FG +       +L+++  + G +  ++   +
Sbjct: 330 ITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLIN 389

Query: 459 EIP-DRGIVSWSAMIGGLAQHG 479
            +P +    +W A++G    HG
Sbjct: 390 SMPYEPDSSAWLALLGACRMHG 411


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/659 (37%), Positives = 389/659 (59%), Gaps = 8/659 (1%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + I    +K G+  ++ S + LVD   K G +  A  +F  +    IV+WN++IA  + H
Sbjct: 67  KNIQAQMLKSGFPVEL-SGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKH 125

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH--CSLIKMEIKSDPI 233
             +  A+++++ M S+ + P+ +T +S  KA + + L++  ++ H    ++ +E+ S+  
Sbjct: 126 RRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV-SNVF 184

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  LVDMY K G   EA+++   + EK+++    +I G+ Q G D EA   F  M  E 
Sbjct: 185 VGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK 244

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  ++ T ++VL S  + + IG  K +H L VK+ FES      SL+  Y +C  V+D++
Sbjct: 245 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 304

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +FK     + V  TS+I+   Q G  E AL  + +M    + P+SF  SS L  C+NL+
Sbjct: 305 LVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLA 364

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
            +E+G+QVH  + K+GF  D +AG+ L+ +Y KCG  D A   F  + +  ++S + MI 
Sbjct: 365 MFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIY 424

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
             AQ+G G+EAL++F +M+  G+ PN +T++SVL ACN++GLV E    F+S  K   I 
Sbjct: 425 SYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIM 483

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
              +HYACM+D+LGRAG+ +EA E++ T     +  +W  LL A ++++ VE+ +     
Sbjct: 484 LTNDHYACMVDMLGRAGRLEEA-EMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRK 542

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           +  I P    T +LLSN+YAS G W  V +++  MK+ KLKK P MSW+E+  + +TF  
Sbjct: 543 ILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMA 602

Query: 654 GDR-SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
           GD  SH  S++I   L+E+       GYV        D+EE+ KE+ L+ HSEKLA+AF 
Sbjct: 603 GDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA 662

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +    G +IR+ KNLR+CVDCH+  + +S+I+ REII RD  RFHHFR+GSCSCG YW
Sbjct: 663 -VWRNVGGSIRILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 257/494 (52%), Gaps = 2/494 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  ++ +     +   ++ +GF   E   + LV    KCG    +R+LFD +PER 
Sbjct: 53  LLRQCIDERSISGIKNIQAQMLKSGFPV-ELSGSKLVDASLKCGEIGYARQLFDGMPERH 111

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ + Y+     +EAV  ++ M+ + + P+E++LSS+  A +        ++ HG
Sbjct: 112 IVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 171

Query: 121 YSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            ++ LG + S++F  +ALVDMY K G   +A  V   +E  D+V   A+I G      + 
Sbjct: 172 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 231

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+K FQ M   ++ PN +TY S L +C  ++    G+ +H  ++K   +S       L+
Sbjct: 232 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 291

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY +C  +D++ ++F  +   N + W  +ISG +QNG +  A   F  M R+ V  +  
Sbjct: 292 TMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSF 351

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TLS+ L+  ++       +QVH +  K  F+ D Y  + LI+ YGKCG  + A  +F   
Sbjct: 352 TLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTL 411

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S VD+++  +MI +YAQ G G EAL+L+  M +  + P+     S+L AC N    E+G 
Sbjct: 412 SEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGC 471

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++     K   M        +V+M  + G +++A+   +E+ +  +V W  ++     H 
Sbjct: 472 ELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSACKVHR 531

Query: 480 RGKEALQMFGQMLE 493
           + + A ++  ++LE
Sbjct: 532 KVEMAERITRKILE 545


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/653 (37%), Positives = 375/653 (57%), Gaps = 31/653 (4%)

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF  I+  +  SW+ ++   V +     AL+++++M   EI+ + +T +S L AC  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH------------- 256
           +   E GR +     ++  + D +V   L+ ++AKCG ++EA  +F              
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 257 -----------------LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
                             M  K++++WN +I+ +   G D +A SLF  M   G   D  
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S++L + AS + +   + +H       F+ D  + N+LI  Y +CG +E A + F   
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +L A  +M+ AYAQF  G++AL LY  M      PD F  SS++++CA+L A  +GK
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H      GF  D   G +LVNMYAKCGS+ DA ++F  I ++ +VSWSAMI   AQHG
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
             +EAL++   M   G+  N +T  SVL AC+H G + E   +F  + + FGI+  +E+ 
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 420

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
              ID+LGRAG  +EA  ++ TMPF+ +      LLG  +++ +V  G+   + + A+EP
Sbjct: 421 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEP 480

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           E   ++VLL+N+YA+AG WD+VAK+RR+M+   +K++ G S IE +DK+Y F+VGD S+ 
Sbjct: 481 ENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNP 540

Query: 660 RSKEIYAKLDEV-SDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
           R+ EI A+L+ + S +  + GYVP      HDV + +KE+LL  HSEK+A+ FGLI +PP
Sbjct: 541 RNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPP 600

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           G+T+R+ KNLR+C DCHT  +  SKI  R IIVRD  RFHHF  G CSCG YW
Sbjct: 601 GSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 238/469 (50%), Gaps = 35/469 (7%)

Query: 49  SRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG 108
           +R++FD I +R+  SW+ L  CYV     +EA+  +KEMV   I  + ++LSS++ AC  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD------------ 156
             D   GR +   + +LG++ D+  A +L+ ++AK G LE+A +VF+             
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 157 ------------------IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
                             ++  D+VSWNA+IA   L+ H+  A  LF +M +    P+++
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           T++S L ACA  +  E GR LH  +       D  +   L+ MY +CGS++ AR  F+ +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            +K L AWN +++ + Q     +A  L+  M  EG   D+ T S+V+ S AS  A+   K
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
            +H  S    FE D  +  +L++ Y KCG + DA K F   S  D+V+ ++MI A AQ G
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAG 437
             EEAL+L   M  + I  +    SS+L+AC++     +G    + + + FG   D    
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 420

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHG---RGK 482
              +++  + G + +A+     +P +   V+   ++GG   HG   RGK
Sbjct: 421 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGK 469



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 3/288 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S K L  G  +H  +   GFD D  + N+L+ MY +CG+   +RR F +I ++ 
Sbjct: 185 ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKE 244

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +WN++ + Y   D  ++A+  +K M+L G  P+ F+ SS++++CA  G    G+ IH 
Sbjct: 245 LGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE 304

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S   G++ D+    ALV+MYAK G+L DA   F  I + D+VSW+A+IA    H H + 
Sbjct: 305 CSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEE 364

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELGRQLHCSLIK-MEIKSDPIVGVGL 238
           AL+L   M    I  N  T +S L AC+ G  L E G      L +   I+ D    VG 
Sbjct: 365 ALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYE-GIDYFMGLSQDFGIERDEENTVGF 423

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
           +D+  + G + EA  + H MP K      + + G  +  GD+     F
Sbjct: 424 IDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAF 471



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 199/445 (44%), Gaps = 46/445 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           VL ACT   D+  G  V       GF+ D  VA SL+ ++AKCG                
Sbjct: 54  VLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMR 113

Query: 45  --------------NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
                         +  DS+ LF  +  + VVSWN++ + Y      ++A   F  M   
Sbjct: 114 DIISVTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTL 173

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G  P+ ++ SS++ ACA       GR +H      G+D D    N L+ MY + G+LE A
Sbjct: 174 GHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESA 233

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
              F  IE  ++ +WN ++A     +    AL L++ M      P+ FT++S + +CA +
Sbjct: 234 RRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASL 293

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
                G+ +H        + D I+G  LV+MYAKCGS+ +A+  F  +  K++++W+ +I
Sbjct: 294 GALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMI 353

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVCKQVHALSVK 326
           +   Q+G   EA  L   M  +G+  ++ T S+VL + +     ++ I        LS  
Sbjct: 354 AASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGI---DYFMGLSQD 410

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQFGLGEE 382
              E D+      ID  G+ G +++A  +      + S V LV        +     G+ 
Sbjct: 411 FGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKA 470

Query: 383 ALKLYLEMQDREINPDSFVCSSLLN 407
             K  + ++    NP S+V   LLN
Sbjct: 471 FTKRIVALEPE--NPGSYV---LLN 490


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/673 (37%), Positives = 391/673 (58%), Gaps = 37/673 (5%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           SS+I  C G        KI  +++K G+   +   N L+D Y K G++  A  VF ++ H
Sbjct: 82  SSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPH 139

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
             IV+WN++IA  + +  +  A+ ++Q+M    I P+ FT++S  KA + + L   G++ 
Sbjct: 140 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 199

Query: 220 HCSLIKMEIK-SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           H   + + +  S+  VG  LVDMYAK G M +AR++   +  K+++ +  +I G+  +G 
Sbjct: 200 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGE 259

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
           D E+  +F  M ++G+  ++ TLS+VL    + + +   + +H L VK   ES       
Sbjct: 260 DGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESA------ 313

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
                                     V  TS+I    Q G  E AL  + +M    I P+
Sbjct: 314 --------------------------VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPN 347

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           SF  SS+L AC++L+  EQGKQ+H  ++KFG   D + G +L++ Y KCGS + A   F+
Sbjct: 348 SFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFN 407

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            + +  +VS ++MI   AQ+G G EALQ+F  M + G+ PN++T + VL ACN+AGL+ E
Sbjct: 408 GLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEE 467

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
             H F S      I+  ++HYACM+D+LGRAG+ +EA  L++ +   ++  +W  LL A 
Sbjct: 468 GCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSAC 526

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+ +VE+ +     +  + PE   THVLLSN+YAS G W  V +++  M++ +LKK P 
Sbjct: 527 RIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPA 586

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
           MSW++V+ +++TF  GD SH   ++I  KL+E+ + + + GYVP     L D++E +K +
Sbjct: 587 MSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIR 646

Query: 699 LLYHHSEKLAVAFGLIATP-PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            LY+HSEKLAVAF L  +     TIR+ KNLR+C DCHT  +F+SKIV R+II RDV RF
Sbjct: 647 SLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRF 706

Query: 758 HHFRNGSCSCGGY 770
           HHFRNG CSCG Y
Sbjct: 707 HHFRNGLCSCGDY 719



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 250/506 (49%), Gaps = 44/506 (8%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N L+  Y KCG+ + +R++FD +P R +V+WNS+ + Y+     +EA+  ++ MV  G
Sbjct: 113 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 172

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD-SDMFSANALVDMYAKVGNLEDA 150
           I P+EF+ SS+  A +  G    G++ HG S+ LG   S++F  +ALVDMYAK G + DA
Sbjct: 173 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 232

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             V   +   D+V + A+I G   H  +  +L++F+ M    I  N +T +S L  C  +
Sbjct: 233 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 292

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
           E    GR +H  ++K  ++S                                 + W  VI
Sbjct: 293 EDLTSGRLIHGLIVKAGLES--------------------------------AVTWTSVI 320

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
            G +QNG +  A   F  M R  +  +  TLS+VL++ +S   +   KQ+HA+ +K   +
Sbjct: 321 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 380

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            D Y+  +LID YGKCG  E A  +F     VD+V+  SMI +YAQ G G EAL+L+  M
Sbjct: 381 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 440

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG---FMSDTFAGNSLVNMYAKC 447
           +D  + P++     +L+AC N    E+G  +       G      D +A   +V++  + 
Sbjct: 441 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYA--CMVDLLGRA 498

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML----EDGVLPNHITL 503
           G + +A+   +++    +V W  ++     HG  + A ++  +++    EDG    H+ L
Sbjct: 499 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDG--GTHVLL 556

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKK 529
            ++  +  +   V E K     M  K
Sbjct: 557 SNLYASTGNWSKVIEMKSAMREMRLK 582



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 5/234 (2%)

Query: 282 AASLFPWMYREGVGFDQTT--LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           AA  F      G  F ++    S++++     ++I    ++ + ++K  F     + N L
Sbjct: 60  AAKSFFATAHNGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKL 117

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           IDAY KCG V  A K+F E     +VA  SMI +Y + G  +EA+ +Y  M    I PD 
Sbjct: 118 IDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDE 177

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGF-MSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           F  SS+  A ++L    +G++ H   +  G  +S+ F G++LV+MYAK G + DA     
Sbjct: 178 FTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSD 237

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           ++  + +V ++A+I G + HG   E+LQ+F  M + G+  N  TL SVL  C +
Sbjct: 238 QVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGN 291


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/565 (41%), Positives = 357/565 (63%), Gaps = 16/565 (2%)

Query: 218 QLHCSLIKMEI-KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           QLH   ++  +  SDP     L+ MY  C    +AR  F  +P+ N +    + SG+++N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI------GVCKQVHALSVKTAFE 330
                +  LF    R  +  D  ++     ++ +F A       GV   +HAL  K  FE
Sbjct: 174 NLVYHSLELF----RAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 229

Query: 331 SDDYIVNSLIDAYGKCGH--VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            +  +VN+++D+Y K G   +E A K+F ++   D+V+  SMI  YAQ G+  EA+ LY 
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVF-DTMERDVVSWNSMIALYAQNGMSAEAIGLYS 288

Query: 389 EMQD--REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           +M +    I  ++   S++L ACA+  A + GK++H  +++ G   + + G S+V+MY+K
Sbjct: 289 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 348

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG ++ A RAF +I ++ I+SWSAMI G   HGRG+EAL++F +M   G+ PN+IT +SV
Sbjct: 349 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 408

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+HAGL+ E ++ + +M+++FGI+   EHY CM+D+LGRAG   EA  L+  M  + 
Sbjct: 409 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP 468

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
           +A++WGALL A RI+KNVE+ + + + LF ++   S  +VLLSNIYA A MW +V ++R 
Sbjct: 469 DAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRL 528

Query: 627 FMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
            +K  +++K PG S  E+K K+Y F VGD+SH +  EIY+ L+++ + + +AGYVP   +
Sbjct: 529 LVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGS 588

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            LHD++E EKE  L  HSEKLAVAF L+ + P + I + KNLR+C DCHT+ +FI+KI  
Sbjct: 589 VLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITE 648

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           REII+RD+ RFHHF++G CSC  YW
Sbjct: 649 REIIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 235/508 (46%), Gaps = 67/508 (13%)

Query: 16  QVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           Q+H + + +G F SD + A++L+ MY  C   +D+RR FD IP+ + V   ++ S YV  
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 75  DFLEEAVCFFKEMVLSGIRP--NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
           + +  ++  F+ M+ S      +E +     +A A   D  +   +H    K+G++ +  
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 133 SANALVDMYAKVG--NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
             N ++D YAK G  +LE A  VF  +E  D+VSWN++IA    +  +  A+ L+ +M +
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292

Query: 191 --SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
               I  N    ++ L ACA     + G+++H  +++M ++ +  VG  +VDMY+KCG +
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 352

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           + A   F  + EKN+++W+ +I+G+  +G   EA  +F  M R G+  +  T  +VL   
Sbjct: 353 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVL--- 409

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
                   C     L      +   Y  N++   +G    +E  V+ +          C 
Sbjct: 410 ------AACSHAGLL------DEGRYWYNAMKQEFG----IEAGVEHY---------GC- 443

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
            M+    + G  +EA  L  EM+   + PD+ +  +LL+AC         K V +  +  
Sbjct: 444 -MVDLLGRAGCLDEAYSLIKEMK---VKPDAAIWGALLSAC------RIHKNVELAEMSV 493

Query: 429 GFMSDTFAGNS-----LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
             + +  A NS     L N+YA+     D +R    +  R I           +   G  
Sbjct: 494 KRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI-----------EKPPGYS 542

Query: 484 ALQMFGQM----LEDGVLPNHITLVSVL 507
           + ++ G++    + D   P HI + S L
Sbjct: 543 SFELKGKIYLFYVGDKSHPQHIEIYSYL 570



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 103/185 (55%), Gaps = 6/185 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     +  G ++H  VV  G + + +V  S+V MY+KCG    + R F  I E++
Sbjct: 307 VLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN 366

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ + Y      +EA+  F EM  SG+RPN  +  S++ AC+ +G  LL    + 
Sbjct: 367 ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG--LLDEGRYW 424

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           Y+    + G ++ +     +VD+  + G L++A ++ K+++  PD   W A+++ C +H+
Sbjct: 425 YNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHK 484

Query: 177 HNDWA 181
           + + A
Sbjct: 485 NVELA 489


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/544 (42%), Positives = 343/544 (63%), Gaps = 32/544 (5%)

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           + N+ +WN VI+   ++G  +EA   F  M +  +  +++T    +KS ++   +   +Q
Sbjct: 38  KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 97

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY----- 374
            H  ++   FE D ++ ++L+D Y KCG + DA  +F E S  ++V+ TSMIT Y     
Sbjct: 98  AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 157

Query: 375 --------------------------AQFGLGEEALKLYLEM-QDREINPDSFVCSSLLN 407
                                     AQ G+  E+++++  M +D EIN ++   S++L 
Sbjct: 158 AHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLL 217

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           ACA+  +   GK +H  +IK G  S+ F G S+++MY KCG ++ A +AF  + ++ + S
Sbjct: 218 ACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKS 277

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           WSAM+ G   HG  KEAL++F +M   GV PN+IT VSVL AC+HAGL+ E  H F++M 
Sbjct: 278 WSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMS 337

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
            +F ++P  EHY CM+D+LGRAG  +EA +L+  M  + +  VWGALLGA R++KNV++G
Sbjct: 338 HEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397

Query: 588 QHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDK 647
           + +A  LF ++P+    +VLLSNIYA AG W++V ++R  MK++ L K PG S +++K +
Sbjct: 398 EISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGR 457

Query: 648 VYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKL 707
           V+ F VGDR H + ++IY  L+++S  L + GYVP + + LHDV   EKE +L  HSEKL
Sbjct: 458 VHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKL 517

Query: 708 AVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           AVAFG++ T PG TI + KNLR+C DCHT+ +FISKIV REI+VRD  RFHHFR+G CSC
Sbjct: 518 AVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSC 577

Query: 768 GGYW 771
           G YW
Sbjct: 578 GDYW 581



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 153/306 (50%), Gaps = 40/306 (13%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR----------- 50
           +K+C++  DL  G Q H   +  GF+ D FV+++LV MY+KCG   D+R           
Sbjct: 83  IKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNI 142

Query: 51  --------------------RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
                               R+FD + ER V+SWNS+ + Y       E++  F  MV  
Sbjct: 143 VSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202

Query: 91  G-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           G I  N  +LS+++ ACA SG   LG+ IH   IK+G +S++F   +++DMY K G +E 
Sbjct: 203 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 262

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A   F  +   ++ SW+A++AG  +H H   AL++F +M  + + PN  T+ S L AC+ 
Sbjct: 263 ARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 322

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVG----LVDMYAKCGSMDEA-RMIFHLMPEKNLI 264
             L E G     ++   E   +P  GV     +VD+  + G + EA  +I  +    + +
Sbjct: 323 AGLLEEGWHWFKAM-SHEFDVEP--GVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV 379

Query: 265 AWNIVI 270
            W  ++
Sbjct: 380 VWGALL 385



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 239/554 (43%), Gaps = 118/554 (21%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM 87
           ++ F  NS++   A+ G+ +++ R F ++ + S                           
Sbjct: 39  TNVFSWNSVIAELARSGDSVEALRAFSSMRKLS--------------------------- 71

Query: 88  VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
               ++PN  +    I +C+   D   GR+ H  ++  G++ D+F ++ALVDMY+K G L
Sbjct: 72  ----LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGEL 127

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM------------------- 188
            DA  +F +I H +IVSW ++I G V ++    AL++F  M                   
Sbjct: 128 RDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNG 187

Query: 189 -------------KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                        K  EIN N  T ++ L ACA    + LG+ +H  +IKM ++S+  VG
Sbjct: 188 MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG 247

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             ++DMY KCG ++ AR  F  M EKN+ +W+ +++G+  +G   EA  +F  M   GV 
Sbjct: 248 TSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVK 307

Query: 296 FDQTTLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
            +  T  +VL + +           F+A+      H   V+   E        ++D  G+
Sbjct: 308 PNYITFVSVLAACSHAGLLEEGWHWFKAMS-----HEFDVEPGVEH----YGCMVDLLGR 358

Query: 346 CGHVEDAVKIFKESS-AVDLVACTSMITA---YAQFGLGE-EALKLYLEMQDREINPDSF 400
            G++++A  + K      D V   +++ A   +    LGE  A KL+      E++P + 
Sbjct: 359 AGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLF------ELDPKNC 412

Query: 401 VCSSLL-NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               LL N  A+   +E  +++ + +   G +     G SLV++  +       DR   E
Sbjct: 413 GYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP--PGFSLVDIKGRVHVFLVGDR---E 467

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED-GVLPNHITLVSVLCACNHAGLVAE 518
            P               QH +  E L+     L++ G +P+   + SVL    H      
Sbjct: 468 HP---------------QHEKIYEYLEKLSMKLQEVGYVPD---MTSVLHDVGHEEKEMV 509

Query: 519 AKHHFESMEKKFGI 532
            + H E +   FGI
Sbjct: 510 LRVHSEKLAVAFGI 523



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 50/366 (13%)

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
           K ++  ++ SWN+VIA       +  AL+ F  M+   + PN  T+  A+K+C+ +    
Sbjct: 34  KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 93

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM--------------------- 253
            GRQ H   +    + D  V   LVDMY+KCG + +AR                      
Sbjct: 94  SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153

Query: 254 ----------IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLS 302
                     +F  M E+++I+WN +I+ + QNG   E+  +F  M ++G + ++  TLS
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
            VL + A   +  + K +H   +K   ES+ ++  S+ID Y KCG VE A K F      
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           ++ + ++M+  Y   G  +EAL+++ EM    + P+     S+L AC++    E+G    
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW- 332

Query: 423 VHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDA---DRAFSEIPDRGIVSWSAMI 472
                F  MS  F           +V++  + G + +A    +     PD   V W A++
Sbjct: 333 -----FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD--FVVWGALL 385

Query: 473 GGLAQH 478
           G    H
Sbjct: 386 GACRMH 391



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 124/251 (49%), Gaps = 15/251 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC       LG  +H  V+  G +S+ FV  S++ MY KCG    +R+ FD + E++
Sbjct: 215 VLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 274

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW+++ + Y      +EA+  F EM ++G++PN  +  S++ AC+ +G  LL    H 
Sbjct: 275 VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG--LLEEGWHW 332

Query: 121 Y---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           +   S +   +  +     +VD+  + G L++A  + K ++  PD V W A++  C +H+
Sbjct: 333 FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHK 392

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV-- 234
           + D  L      K  E++P    Y   L         + GR      +++ +K+  +V  
Sbjct: 393 NVD--LGEISARKLFELDPKNCGYYVLLSNIYA----DAGRWEDVERMRILMKNSGLVKP 446

Query: 235 -GVGLVDMYAK 244
            G  LVD+  +
Sbjct: 447 PGFSLVDIKGR 457


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/642 (38%), Positives = 362/642 (56%), Gaps = 37/642 (5%)

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           WN VI           AL ++ Q++  +   + F   S LKAC  +   +LG+++H  ++
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
           K  +  D  VG  L+ MY +C  ++ AR++F  M E+++++W+ +I    +N     A  
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI----VNSLI 340
           L   M    V   +  + +++   A    + + K +HA  ++ +  +++++      +L+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS--NNEHMGVPTTTALL 269

Query: 341 DAYGKCGHV-------------------------------EDAVKIFKESSAVDLVACTS 369
           D Y KCGH+                               E+A  +F  +   D++  T+
Sbjct: 270 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTA 329

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M++AYAQ    ++A  L+ +M+   + P      SLL+ CA   A + GK VH +I K  
Sbjct: 330 MLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER 389

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
              D     +LV+MYAKCG I+ A R F E   R I  W+A+I G A HG G+EAL +F 
Sbjct: 390 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 449

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +M   GV PN IT + +L AC+HAGLV E K  FE M   FG+ P  EHY CM+D+LGRA
Sbjct: 450 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 509

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G   EA E++ +MP + N  VWGAL+ A R++KN ++G+ AA  L  IEPE    +VL+S
Sbjct: 510 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 569

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLD 669
           NIYA+A  W + A VR+ MK   +KKEPG S IEV   V+ F +GD+SH + + I   L 
Sbjct: 570 NIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLA 629

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
           E+   LN+AGYVP   T L +++E EKE  L +HSEKLA+AFGLI+T P   IR+ KNLR
Sbjct: 630 EMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLR 689

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +C DCH + + +SKI  R IIVRD NRFHHFR G CSCG YW
Sbjct: 690 VCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 190/395 (48%), Gaps = 42/395 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC       LG ++HG V+  G D D FV N+L++MY +C     +R +FD + ER 
Sbjct: 130 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 189

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW+++          + A+   +EM    +RP+E ++ SM+N  A + +  +G+ +H 
Sbjct: 190 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 249

Query: 121 YSIKLGYDSDM--FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV----L 174
           Y I+   +  M   +  AL+DMYAK G+L  A  +F  +    +VSW A+IAGC+    L
Sbjct: 250 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 309

Query: 175 HEHN---------------------------DWALKLFQQMKSSEINPNMFTYTSALKAC 207
            E                             D A  LF QM++S + P   T  S L  C
Sbjct: 310 EEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLC 369

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           A     +LG+ +H  + K  ++ D I+   LVDMYAKCG ++ A  +F     +++  WN
Sbjct: 370 AVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 429

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ-----VHA 322
            +I+G   +G   EA  +F  M R+GV  +  T   +L + +    +   K+     VH 
Sbjct: 430 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 489

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             +    E        ++D  G+ G +++A ++ K
Sbjct: 490 FGLVPQIEH----YGCMVDLLGRAGLLDEAHEMIK 520



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 221/467 (47%), Gaps = 39/467 (8%)

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           WN + + Y   +    A+  + ++       + F   S++ AC     + LG++IHG+ +
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K G D D+F  NAL+ MY +   +E A  VF  +   D+VSW+ +I     ++  D AL+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV----GLV 239
           L ++M   ++ P+     S +   A      +G+ +H  +I+    ++  +GV     L+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRN--SNNEHMGVPTTTALL 269

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP---------W-- 288
           DMYAKCG +  AR +F+ + +K +++W  +I+G +++    EA +LF          W  
Sbjct: 270 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTA 329

Query: 289 --------------------MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
                               M   GV   + T+ ++L   A   A+ + K VH+   K  
Sbjct: 330 MLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER 389

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            E D  +  +L+D Y KCG +  A ++F E+ + D+    ++IT +A  G GEEAL ++ 
Sbjct: 390 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 449

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKC 447
           EM+ + + P+      LL+AC++     +GK++   ++  FG +        +V++  + 
Sbjct: 450 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 509

Query: 448 GSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           G +D+A      +P +   + W A++     H   +       Q+LE
Sbjct: 510 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE 556



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 133/266 (50%), Gaps = 12/266 (4%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           + LF GL    +V +T   +    +N L           ++R LFD+   R V+ W ++ 
Sbjct: 282 RQLFNGLTQKTVVSWTAMIAGCIRSNRLE----------EARALFDSTQNRDVMIWTAML 331

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S Y   + +++A   F +M  SG+RP + ++ S+++ CA +G   LG+ +H Y  K   +
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            D     ALVDMYAK G++  A  +F +    DI  WNA+I G  +H + + AL +F +M
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGS 247
           +   + PN  T+   L AC+   L   G++L   ++        I   G +VD+  + G 
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511

Query: 248 MDEARMIFHLMPEK-NLIAWNIVISG 272
           +DEA  +   MP K N I W  +++ 
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAA 537



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 2/179 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C     L LG  VH  +     + D  +  +LV MYAKCG+   + RLF     R 
Sbjct: 365 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 424

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +  WN++ + +    + EEA+  F EM   G++PN+ +   +++AC+ +G    G+K+  
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 484

Query: 121 YSI-KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
             +   G    +     +VD+  + G L++A  + K +   P+ + W A++A C LH++
Sbjct: 485 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 543


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/656 (36%), Positives = 382/656 (58%), Gaps = 3/656 (0%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           KIH   I  G      S   L+  YA++G++E A  VF       + +WNA+I       
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELGRQLHCSLIKMEIKSDPIVG 235
               AL L+ +M S  + P+  TYT  LKAC   ++L+  G +     +      D  VG
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRS-GEETWRQAVDQGYGDDVFVG 143

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             ++++YAKCG MDEA  +F  M  ++L+ W  +I+G  QNG   EA  ++  M+++ V 
Sbjct: 144 AAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D   +  ++++  +     +   +H   ++     D  +  SL+D Y K GH+E A  +
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F+     ++++ +++I+ +AQ G    AL+L ++MQ     PDS    S+L AC+ +   
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + GK VH +I++     D  +  ++++MY+KCGS+  A   F +I  R  +SW+A+I   
Sbjct: 324 KLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASY 382

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
             HG G+EAL +F QM E  V P+H T  S+L A +H+GLV + ++ F  M  ++ IQP 
Sbjct: 383 GIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPS 442

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
           ++HYACM+D+L RAG+ +EA EL+++M  +   ++W ALL     +    +G+ AA+ + 
Sbjct: 443 EKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVL 502

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            + P+    + L+SN +A+A  WD VA+VR+ MK   +KK PG S +EV  K++ F + D
Sbjct: 503 ELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMED 562

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           +SH + +EI   L ++   +   GYVP  E  LH++EE  KE++L +HSE+LA+AFGL+ 
Sbjct: 563 KSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLN 622

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG  + + KNLR+C DCH + +FISKIV+REI+VRDV RFHHF++G CSCG YW
Sbjct: 623 TGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 238/469 (50%), Gaps = 7/469 (1%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           ++H +++ TG          L+  YA+ G+   +R++FD  P+  V +WN++   Y    
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            + EA+  +  M   G+RP+  + + ++ AC  S D   G +    ++  GY  D+F   
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           A++++YAK G +++A+ VF  +   D+V W  +I G   +     A+ +++QM    +  
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +       ++AC  +   ++G  +H  +I+ +I  D IV   LVDMYAK G ++ A  +F
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  KN+I+W+ +ISG  QNG    A  L   M   G   D  +L +VL + +    + 
Sbjct: 265 RRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLK 324

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + K VH   V+     D     ++ID Y KCG +  A  +F + S  D ++  ++I +Y 
Sbjct: 325 LGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK---QVHVHIIKFGFMS 432
             G GEEAL L+L+M++  + PD    +SLL+A ++    E+G+    + V+  K     
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAF-SEIPDRGIVSWSAMIGGLAQHGR 480
             +A   +V++ ++ G +++A     S I + GI  W A++ G   HG+
Sbjct: 444 KHYA--CMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGK 490



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 204/403 (50%), Gaps = 11/403 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT   DL  G +     V  G+  D FV  +++ +YAKCG   ++ R+FD +  R 
Sbjct: 111 VLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRD 170

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W ++ +         EAV  +++M    +  +   +  +I AC   G S +G  IHG
Sbjct: 171 LVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHG 230

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y I+     D+    +LVDMYAK G+LE A  VF+ + + +++SW+A+I+G   +     
Sbjct: 231 YMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGN 290

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+L   M+S    P+  +  S L AC+ +   +LG+ +H  +++  +  D +    ++D
Sbjct: 291 ALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVID 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCGS+  AR +F  +  ++ I+WN +I+ +  +G   EA SLF  M    V  D  T
Sbjct: 350 MYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHAT 409

Query: 301 LSTVLKSVASFQAIGVCKQVHALSV-KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-- 357
            +++L + +    +   +   ++ V +   +  +     ++D   + G VE+A ++ +  
Sbjct: 410 FASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESM 469

Query: 358 --ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
             E      VA  S    + +F +GE A K  LE+     NPD
Sbjct: 470 ITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLEL-----NPD 507


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/650 (40%), Positives = 379/650 (58%), Gaps = 60/650 (9%)

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV------IAGCVLHEHNDWAL 182
           SD+ S N  +  + +  +LE A  VF+ +     V+WN +      +AG V   H     
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAH----- 125

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLVDM 241
           +LF ++      P+  +Y   L  C    L+  G +   +   KM +K D      L+  
Sbjct: 126 ELFDKIPE----PDSVSYNIML-VCY---LRSYGVKAALAFFNKMPVK-DIASWNTLISG 176

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           +A+ G M +A  +F +MPEKN ++W+ +ISG++++G D+EAA     +Y+  VG      
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG-DLEAAEE---LYK-NVG------ 225

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
              +KSV                V+TA          ++  Y K G VE A +IF+  + 
Sbjct: 226 ---MKSVV---------------VETA----------MLTGYMKFGKVELAERIFQRMAV 257

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            +LV   SMI  Y +    E+ LK++  M +  + P+    SS+L  C+NLSA   G+Q+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  + K     DT A  SL++MY KCG +D A + F E+P + +++W+AMI G AQHG G
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAG 377

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           ++AL +F +M    + P+ IT V+V+ ACNHAG V     +F+SM+K+FGI+    HY C
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           +ID+LGRAG+  EA+ L+  MPF  +A+++G LLGA RI+KN+++ + AA  L  ++P  
Sbjct: 438 VIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTS 497

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           ++ +V L+NIYA+   WD VAKVR+ MK++ + K PG SWIE+K   + F   DR H   
Sbjct: 498 ATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPEL 557

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
             I+ KL+E+   +  AGYVP +E  LHDVEE  KE+LL  HSEKLA+AFGL+ T PG  
Sbjct: 558 TSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTP 617

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IRV KNLR+C DCH + +FIS I  REIIVRD  RFHHFRNG CSCG YW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 47/389 (12%)

Query: 2   LKAC--TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK-CGNFIDSRRLFDAIPE 58
           ++AC   S +++F  + V   V +          N+++  Y K  G   ++  LFD IPE
Sbjct: 84  VRACDLESARNVFEKMSVRTTVTW----------NTMLSGYTKVAGKVKEAHELFDKIPE 133

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-------------------------- 92
              VS+N +  CY+    ++ A+ FF +M +  I                          
Sbjct: 134 PDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM 193

Query: 93  -RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
              N  S S+MI+     GD     +++     +G  S +    A++  Y K G +E A 
Sbjct: 194 PEKNGVSWSAMISGYVEHGDLEAAEELYK---NVGMKS-VVVETAMLTGYMKFGKVELAE 249

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F+ +   ++V+WN++IAG V +   +  LK+F+ M  S + PN  + +S L  C+ + 
Sbjct: 250 RIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLS 309

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
              LGRQ+H  + K  +  D      L+ MY KCG +D A  +F  MP K++I WN +IS
Sbjct: 310 ALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMIS 369

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV--ASFQAIGVCKQVHALSVKTAF 329
           G+ Q+G   +A  LF  M    +  D  T   V+ +   A F  +GV +   ++  +   
Sbjct: 370 GYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGV-QYFKSMKKEFGI 428

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           E+       +ID  G+ G +++AV + KE
Sbjct: 429 EAKPVHYTCVIDLLGRAGRLDEAVSLIKE 457



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 1/229 (0%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           V  +++  Y K G    + R+F  +  +++V+WNS+ + YV     E+ +  FK M+ S 
Sbjct: 231 VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESR 290

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RPN  SLSS++  C+      LGR++H    K     D  +  +L+ MY K G+L+ A 
Sbjct: 291 VRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAW 350

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F ++   D+++WNA+I+G   H     AL LF +M++  + P+  T+ + + AC    
Sbjct: 351 KLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410

Query: 212 LKELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
             +LG Q   S+ K   I++ P+    ++D+  + G +DEA  +   MP
Sbjct: 411 FVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP 459



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 2/183 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C++   L LG Q+H +V  +    D     SL+ MY KCG+   + +LF  +P + 
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG-RKIH 119
           V++WN++ S Y       +A+  F +M    ++P+  +  ++I AC  +G   LG +   
Sbjct: 361 VITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFK 420

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLHEHN 178
               + G ++       ++D+  + G L++AV++ K++   P    +  ++  C +H++ 
Sbjct: 421 SMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNL 480

Query: 179 DWA 181
           D A
Sbjct: 481 DLA 483


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 358/591 (60%), Gaps = 5/591 (0%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ +   M+   +  +  TY+  +K C        G+++H  +          +   L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY K   ++EA+++F  MPE+N+++W  +IS +     +  A  L  +M+R+GV  +  T
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S+VL++      +   KQ+H+  +K   ESD ++ ++LID Y K G + +A+K+F+E  
Sbjct: 389 FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   S+I A+AQ   G+EAL LY  M+      D    +S+L AC +LS  E G+Q
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            HVH++KF    D    N+L++MY KCGS++DA   F+ +  + ++SWS MI GLAQ+G 
Sbjct: 506 AHVHVLKFD--QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGF 563

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             EAL +F  M   G  PNHIT++ VL AC+HAGLV E  ++F SM   +GI P +EHY 
Sbjct: 564 SMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYG 623

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+LGRA K  + ++L+  M  + +   W  LL A R  +NV++  +AA+ +  ++P+
Sbjct: 624 CMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQ 683

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            +  +VLLSNIYA +  W++VA+VRR MK   ++KEPG SWIEV  +++ F +GD+SH +
Sbjct: 684 DTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQ 743

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
             EI  +L++    L  AGYVP     L D+E  ++E  L +HSEKLA+ FG+++ P   
Sbjct: 744 IDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEK 803

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TIR+ KNL+IC DCH   + I+++  R I++RD  R+HHF++G CSCG YW
Sbjct: 804 TIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 233/465 (50%), Gaps = 39/465 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C +   +  G +VH  +   G+    F+ N L+ MY K     +++ LFD +PER+
Sbjct: 291 LIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERN 350

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW ++ S Y +    + A+     M   G+ PN F+ SS++ AC    D    +++H 
Sbjct: 351 VVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHS 407

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K+G +SD+F  +AL+D+Y+K+G L +A+ VF+++   D V WN++IA    H   D 
Sbjct: 408 WIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDE 467

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L++ M+      +  T TS L+AC  + L ELGRQ H  ++K +   D I+   L+D
Sbjct: 468 ALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFD--QDLILNNALLD 525

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS+++A+ IF+ M +K++I+W+ +I+G  QNG  MEA +LF  M  +G   +  T
Sbjct: 526 MYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHIT 585

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +  VL + +           HA  V   +    Y   S+ + YG    ++   + +    
Sbjct: 586 ILGVLFACS-----------HAGLVNEGW----YYFRSMNNLYG----IDPGREHY--GC 624

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            +DL+     +         ++ +KL  EM      PD     +LL+AC      +    
Sbjct: 625 MLDLLGRAEKL---------DDMVKLIHEMN---CEPDVVTWRTLLDACRARQNVDLATY 672

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
               I+K     DT A   L N+YA     +D       +  RGI
Sbjct: 673 AAKEILKLD-PQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGI 716



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 204/406 (50%), Gaps = 23/406 (5%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L  A+     M   G+  +  + S +I  C   G    G+++H +    GY    F  N 
Sbjct: 266 LPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNI 325

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L++MY K   LE+A  +F  +   ++VSW  +I+     + ND A++L   M    + PN
Sbjct: 326 LINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           MFT++S L+AC    L +L +QLH  ++K+ ++SD  V   L+D+Y+K G + EA  +F 
Sbjct: 386 MFTFSSVLRACE--RLYDL-KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFR 442

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M   + + WN +I+   Q+    EA  L+  M R G   DQ+TL++VL++  S   + +
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            +Q H   +K  F+ D  + N+L+D Y KCG +EDA  IF   +  D+++ ++MI   AQ
Sbjct: 503 GRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G   EAL L+  M+ +   P+      +L AC++     +G         F  M++ + 
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYY------FRSMNNLYG 614

Query: 437 GNS-------LVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMI 472
            +        ++++  +   +DD  +   E+   PD  +V+W  ++
Sbjct: 615 IDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPD--VVTWRTLL 658


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/729 (36%), Positives = 407/729 (55%), Gaps = 64/729 (8%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           LF++    +V  + S+   Y H     + V  +++M   G+RP+ F    +I + AG+G 
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS-AGTG- 113

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD----IVSWNA 167
              G   H + +KLG+ SD F  NA++DMYA++G +  A  VF +I  PD    +  WNA
Sbjct: 114 ---GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEI--PDYERKVADWNA 168

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +++G    E    A  LF  M       N+ T+T+                         
Sbjct: 169 MVSGYWKWESEGQAQWLFDVMPER----NVITWTA------------------------- 199

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                     +V  YAK   ++ AR  F  MPE+++++WN ++SG+ QNG   EA  LF 
Sbjct: 200 ----------MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFD 249

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQ----AIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
            M   G+  D+TT  TV+ + +S      A  + + +H    +   + + ++  +L+D Y
Sbjct: 250 EMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH----QKRIQLNCFVRTALLDMY 305

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVC 402
            K G ++ A K+F      ++V   SMI  YAQ G    A++L+ EM   +++ PD    
Sbjct: 306 AKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTM 365

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
            S+++AC +L A E G  V   + +          N+++ MY++CGS++DA R F E+  
Sbjct: 366 VSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT 425

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           R +VS++ +I G A HG G EA+ +   M E G+ P+ +T + VL AC+HAGL+ E +  
Sbjct: 426 RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV 485

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           FES++      P  +HYACM+D+LGR G+ ++A   ++ MP + +A V+G+LL A+RI+K
Sbjct: 486 FESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHK 540

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
            VE+G+ AA  LF +EP+ S   +LLSNIYASAG W +V ++R  MK   +KK  G SW+
Sbjct: 541 QVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 600

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E   K++ F V DRSH RS +IY  L E+   + +AGY+      L DVEE EKE+++  
Sbjct: 601 EYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGT 660

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+ + L+ +  GA IRV KNLR+C DCHT+ + ISK+  R IIVRD NRFH F +
Sbjct: 661 HSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFND 720

Query: 763 GSCSCGGYW 771
           G CSC  YW
Sbjct: 721 GLCSCKDYW 729



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 220/448 (49%), Gaps = 59/448 (13%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
            ++V  YAK  +   +RR FD +PERSVVSWN++ S Y      EEA+  F EMV +GI 
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIE 257

Query: 94  PNEFSLSSMINACAGSGDSLLG----RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           P+E +  ++I+AC+  GD  L     R +H   I+L    + F   AL+DMYAK G+L+ 
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL----NCFVRTALLDMYAKFGDLDS 313

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACA 208
           A  +F  +   ++V+WN++IAG   +  +  A++LF++M  + ++ P+  T  S + AC 
Sbjct: 314 ARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 373

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   ELG  +   L + +IK        ++ MY++CGSM++A+ +F  M  ++++++N 
Sbjct: 374 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 433

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG   +G  +EA +L   M   G+  D+ T   VL + +           HA      
Sbjct: 434 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS-----------HA------ 476

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAYAQFGLGEEALKL 386
                             G +E+  K+F+  +  A+D  AC  M+    + G  E+A + 
Sbjct: 477 ------------------GLLEEGRKVFESIKDPAIDHYAC--MVDLLGRVGELEDAKR- 515

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMY 444
              M+   + P + V  SLLNA       E G+     +  F    D  +GN ++  N+Y
Sbjct: 516 --TMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKL--FELEPDN-SGNFILLSNIY 570

Query: 445 AKCGSIDDADRAFSEIPDRGI---VSWS 469
           A  G   D +R    +   G+     WS
Sbjct: 571 ASAGRWKDVERIREAMKKGGVKKTTGWS 598



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 138/262 (52%), Gaps = 9/262 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC+S+ D  L   +   +       + FV  +L+ MYAK G+   +R+LF+ +P R+
Sbjct: 266 VISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRN 325

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WNS+ + Y        A+  FKEM+ +  + P+E ++ S+I+AC   G   LG  + 
Sbjct: 326 VVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVV 385

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            +  +      +   NA++ MY++ G++EDA  VF+++   D+VS+N +I+G   H H  
Sbjct: 386 RFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGV 445

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VG 237
            A+ L   MK   I P+  T+   L AC+   L E GR++  S+       DP +     
Sbjct: 446 EAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI------KDPAIDHYAC 499

Query: 238 LVDMYAKCGSMDEARMIFHLMP 259
           +VD+  + G +++A+     MP
Sbjct: 500 MVDLLGRVGELEDAKRTMERMP 521



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 85/405 (20%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK----IF 356
           L ++   V +F  +   +Q+HA  +  +    +Y V  LI+    C  +         +F
Sbjct: 4   LGSIASRVGNFNHL---RQLHAQIIHNSLHHHNYWVALLIN---HCTRLRAPPHYTHLLF 57

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
             +   ++   TSM+  Y+      + + +Y +MQ   + PD+FV   L+      SA  
Sbjct: 58  NSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK-----SAGT 112

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-------------- 462
            G   H H++K G  SD F  N++++MYA+ G I  A + F EIPD              
Sbjct: 113 GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG 172

Query: 463 -------------------RGIVSWSAMIGGLA--------------------------- 476
                              R +++W+AM+ G A                           
Sbjct: 173 YWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAML 232

Query: 477 ----QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
               Q+G  +EAL++F +M+  G+ P+  T V+V+ AC+  G    A     ++ +K  I
Sbjct: 233 SGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK-RI 291

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAA 591
           Q        ++D+  + G    A +L +TMP + N   W +++ G A+  ++    +   
Sbjct: 292 QLNCFVRTALLDMYAKFGDLDSARKLFNTMPGR-NVVTWNSMIAGYAQNGQSAMAIELFK 350

Query: 592 EMLFA--IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           EM+ A  + P++  T V + +     G  +    V RF+ +N++K
Sbjct: 351 EMITAKKLTPDE-VTMVSVISACGHLGALELGNWVVRFLTENQIK 394


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/718 (34%), Positives = 396/718 (55%), Gaps = 48/718 (6%)

Query: 101  SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
            S+ ++   +G   LG  +H  S+K G    + SAN L+ +Y K  N++ A  +F +I   
Sbjct: 295  SLFHSTISNGPPPLG-TLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQR 353

Query: 161  DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
            +  +W  +I+G      ++   KLF++M++    PN +T +S  K C+     +LG+ +H
Sbjct: 354  NTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVH 413

Query: 221  CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              +++  I +D ++G  ++D+Y KC   + A  +F LM E ++++WNI+IS +L+ G   
Sbjct: 414  AWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVE 473

Query: 281  EAASLF---PW----------------------------MYREGVGFDQTTLSTVLKSVA 309
            ++  +F   P+                            M   G  F   T S  L   +
Sbjct: 474  KSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSS 533

Query: 310  SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS--------- 360
            S   + + +Q+H + +K  F  D +I +SL++ Y KCG +++A  + K+           
Sbjct: 534  SLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNA 593

Query: 361  -------AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
                      +V+   M++ Y   G  E+ LK +  M    +  D    +++++ACAN  
Sbjct: 594  GVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAG 653

Query: 414  AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
              E G+ VH +  K G   D + G+SL++MY+K GS+DDA   F +  +  IV W++MI 
Sbjct: 654  ILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMIS 713

Query: 474  GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            G A HG+GK+A+ +F +ML  G++PN +T + VL AC HAGL+ E   +F  M+  + I 
Sbjct: 714  GCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCIN 773

Query: 534  PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
            P  EH   M+D+ GRAG   E    +         SVW + L + R++KNVE+G+  +EM
Sbjct: 774  PGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEM 833

Query: 594  LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
            L  + P     +VLLSN+ AS   WD  A+VR  M    +KK+PG SWI++KD+++TF +
Sbjct: 834  LLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIM 893

Query: 654  GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
            GDRSH + +EIY+ LD +   L + GY   V+  + DVEE + E L+ HHSEKLAV FG+
Sbjct: 894  GDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGI 953

Query: 714  IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            I T     IR+ KNLRIC DCH   ++ S+++ REII+RD++RFHHF++G CSCG YW
Sbjct: 954  INTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 255/538 (47%), Gaps = 66/538 (12%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           AN L+ +Y K  N   +R+LFD IP+R+  +W  L S +      E     F+EM   G 
Sbjct: 327 ANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGA 386

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK--------- 143
            PN+++LSS+   C+   +  LG+ +H + ++ G D+D+   N+++D+Y K         
Sbjct: 387 CPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAER 446

Query: 144 ----------------------VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
                                  G++E ++ +F+ + + D+VSWN ++ G +   +   A
Sbjct: 447 VFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQA 506

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L+    M       ++ T++ AL   + + L ELGRQLH  ++K     D  +   LV+M
Sbjct: 507 LEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEM 566

Query: 242 YAKCGSMDEARMIFHLMP----------------EKNLIAWNIVISGHLQNGGDMEAASL 285
           Y KCG MD A ++   +P                +  +++W +++SG++ NG   +    
Sbjct: 567 YCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKT 626

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M RE V  D  T++T++ + A+   +   + VHA + K     D Y+ +SLID Y K
Sbjct: 627 FRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSK 686

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
            G ++DA  IF++++  ++V  TSMI+  A  G G++A+ L+ EM ++ I P+      +
Sbjct: 687 SGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGV 746

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN-------SLVNMYAKCGSIDDADRAFS 458
           LNAC +    E+G +       F  M D +  N       S+V++Y + G + +      
Sbjct: 747 LNACCHAGLLEEGCRY------FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIF 800

Query: 459 EIPDRGIVS-WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           E     + S W + +     H     GK   +M  Q+      P    L+S +CA NH
Sbjct: 801 ENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSD--PGAYVLLSNMCASNH 856



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 231/538 (42%), Gaps = 73/538 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD------ 54
           + K C+   +L LG  VH  ++  G D+D  + NS++ +Y KC  F  + R+F+      
Sbjct: 396 LFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGD 455

Query: 55  -------------------------AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     +P + VVSWN++    +   +  +A+     MV 
Sbjct: 456 VVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVE 515

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G   +  + S  +   +      LGR++HG  +K G+  D F  ++LV+MY K G +++
Sbjct: 516 CGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDN 575

Query: 150 AVAVFKDIE----------------HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           A  V KD+                    IVSW  +++G V +   +  LK F+ M    +
Sbjct: 576 ASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELV 635

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
             ++ T T+ + ACA   + E GR +H    K+  + D  VG  L+DMY+K GS+D+A  
Sbjct: 636 VVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWT 695

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV--ASF 311
           IF    E N++ W  +ISG   +G   +A  LF  M  +G+  ++ T   VL +   A  
Sbjct: 696 IFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGL 755

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVN-------SLIDAYGKCGHVEDAVKIFKESSAVDL 364
              G C+    +        D Y +N       S++D YG+ GH+ +      E+    L
Sbjct: 756 LEEG-CRYFRMM-------KDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHL 807

Query: 365 VACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
            +      +  +     E  K   EM  Q    +P ++V  S  N CA+   +++  +V 
Sbjct: 808 TSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLS--NMCASNHRWDEAARVR 865

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW-SAMIGGLAQHG 479
             + + G       G S + +  +  +    DR+  +  D  I S+   +IG L + G
Sbjct: 866 SLMHQRGIKKQ--PGQSWIQLKDQIHTFIMGDRSHPQ--DEEIYSYLDILIGRLKEIG 919


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/811 (31%), Positives = 433/811 (53%), Gaps = 75/811 (9%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
            V + C      FLG  +HG ++  G D SD  V ++L+  Y +C +   + ++FD +P+R
Sbjct: 530  VFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKR 589

Query: 60   SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
              ++WN +    +     E+AV  F+ M  SG +  + ++  ++  C+       GR+IH
Sbjct: 590  DDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIH 649

Query: 120  GYSIKLGYDSDMFSANALVDMYAKVGNLE------------------------------- 148
            GY ++LG++S++   N+L+ MY++ G LE                               
Sbjct: 650  GYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVD 709

Query: 149  DAVAVFKDIE----HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
            DA+ +  ++E     PDIV+WN++++G      +  A+ + ++++ + + PN  + +S L
Sbjct: 710  DAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLL 769

Query: 205  KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            +A     L +LG+ +H  +I+ ++  D  V   L+DMY K G +  ARM+F +M EKN++
Sbjct: 770  QAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIV 829

Query: 265  AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
            AWN +ISG    G   EA +L   M +EG+  +  T                        
Sbjct: 830  AWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTW----------------------- 866

Query: 325  VKTAFESDDYIVNSLIDAYGKCGHVEDAV----KIFKESSAVDLVACTSMITAYAQFGLG 380
                        NSL+  Y   G  E A+    K+ K     ++V+ T++++  ++ G  
Sbjct: 867  ------------NSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNF 914

Query: 381  EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
               LK++L+MQ+  ++P+S   SSLL     LS    GK+VH   +K     D     +L
Sbjct: 915  GNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATAL 974

Query: 441  VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            V+MYAK G +  A   F  I ++ + SW+ MI G A   RG+E + +F  MLE G+ P+ 
Sbjct: 975  VDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDA 1034

Query: 501  ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
            IT  SVL  C ++GLV E   +F+ M   +G+ P  EH +CM+++LGR+G   EA + + 
Sbjct: 1035 ITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIR 1094

Query: 561  TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            TMP + +A++WGA L + +I++++E+ + A + L  +EP  S+ ++++ N+Y++   W +
Sbjct: 1095 TMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGD 1154

Query: 621  VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
            V ++R  M +N+++ +   SWI++   V+ F    ++H    EIY +L ++   + K+GY
Sbjct: 1155 VERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKSGY 1214

Query: 681  VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
            +P       +V ESEKE+LL  H+EKLA+ +GLI     A IRV KN  +C DCHT  ++
Sbjct: 1215 MPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKY 1274

Query: 741  ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            IS + +REI++++  R HHFR+G CSC   W
Sbjct: 1275 ISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 139/298 (46%), Gaps = 6/298 (2%)

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE-EALKLYLEMQ 391
           ++I   LI  Y + G    A  +F      + V+    +     FG+ + + L+ ++ +Q
Sbjct: 457 EFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQ 516

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF-MSDTFAGNSLVNMYAKCGSI 450
           ++ +N D  V + +   CA L     G  +H  +IK G   SDT   ++L+  Y +C S+
Sbjct: 517 NKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSL 576

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           D A++ F E+P R  ++W+ ++    Q G  ++A+++F  M   G      T+V +L  C
Sbjct: 577 DLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVC 636

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           ++    A+ +        + G +        +I +  R GK + + ++ ++M    N S 
Sbjct: 637 SNKEGFAQGR-QIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSM-VDRNLSS 694

Query: 571 WGALLGA-ARI-YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRR 626
           W +++ +  R+ Y +  +G         ++P+  + + LLS   + A   D +A ++R
Sbjct: 695 WNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKR 752


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/439 (48%), Positives = 308/439 (70%)

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
           + + N+L+D Y K G+ + A  +F++ +  D+++ TS++T     G  EEAL+L+ EM+ 
Sbjct: 2   ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             I+PD  V +++L+ACA L+  E GKQVH + +K G  S     NSLV+MYAKCG I+D
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A++ F  +  + +++W+A+I G AQ+GRG+E+L  +  M+  GV P+ IT + +L AC+H
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           AGLV   + +F+SME+ +GI+P  EHYACMID+LGR+GK  EA EL++ M  Q +A+VW 
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           ALL A R++ NVE+G+ AA  LF +EP+ +  +VLLSN+Y++AG W+  AK RR MK   
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           + KEPG SWIE+  KV+ F   DRSH R+ EIY+K+DE+  L+ +AGYVP +   LHD++
Sbjct: 302 VSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           E  KE  L +HSEKLAVAFGL+  PPGA IR+ KNLRIC DCHT+ +++S +  R +I+R
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D N FHHFR G+CSC  YW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 140/263 (53%), Gaps = 6/263 (2%)

Query: 30  EFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           E V N+LV MYAK G F  +  +F+ + ++ V+SW SL +  VH    EEA+  F EM +
Sbjct: 2   ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            GI P++  ++++++ACA       G+++H   +K G  S +   N+LV MYAK G +ED
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF  +E  D+++W A+I G   +     +L  +  M +S + P+  T+   L AC+ 
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181

Query: 210 MELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWN 267
             L E GR    S+ ++  IK  P     ++D+  + G + EA+ + + M  + +   W 
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241

Query: 268 IVISGHLQNG----GDMEAASLF 286
            +++    +G    G+  A +LF
Sbjct: 242 ALLAACRVHGNVELGERAANNLF 264



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 34/331 (10%)

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           NALVDMYAK G  + A  VF+ +   D++SW +++ GCV +   + AL+LF +M+   I+
Sbjct: 6   NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+     + L ACA + + E G+Q+H + +K  + S   V   LV MYAKCG +++A  +
Sbjct: 66  PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  M  +++I W  +I G+ QNG   E+ + +  M   GV  D  T             I
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITF------------I 173

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
           G+   + A S     E       S+ + YG        +K   E  A        MI   
Sbjct: 174 GL---LFACSHAGLVEHGRSYFQSMEEVYG--------IKPGPEHYAC-------MIDLL 215

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            + G   EA +L  +M    + PD+ V  +LL AC      E G++   ++ +     + 
Sbjct: 216 GRSGKLMEAKELLNQMA---VQPDATVWKALLAACRVHGNVELGERAANNLFELE-PKNA 271

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
                L N+Y+  G  ++A +    +  RG+
Sbjct: 272 VPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 22/247 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G QVH   + +G  S   V NSLV MYAKCG   D+ ++FD++  + 
Sbjct: 74  VLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQD 133

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V++W +L   Y       E++ F+ +M+ SG++P+  +   ++ AC+ +G    GR    
Sbjct: 134 VITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQ 193

Query: 121 -----YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
                Y IK G +        ++D+  + G L +A  +   +   PD   W A++A C +
Sbjct: 194 SMEEVYGIKPGPE----HYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRV 249

Query: 175 H---EHNDWALKLFQQMKSSEINP-----NMFT----YTSALKACAGMELKELGRQLHCS 222
           H   E  + A     +++     P     N+++    +  A K    M+L+ + ++  CS
Sbjct: 250 HGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCS 309

Query: 223 LIKMEIK 229
            I+M  K
Sbjct: 310 WIEMSSK 316


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/650 (37%), Positives = 369/650 (56%), Gaps = 2/650 (0%)

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVF-KDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           + L +D+D+ S   L        N +  + VF K   + +   +N +I G V  +  + A
Sbjct: 30  LNLHHDNDLLSI-ILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNA 88

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + L+  M  + I P+ FT++  LKACA + L  LG  +H  + K     D  V   +V  
Sbjct: 89  VHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCF 148

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y+KCG + +A  +F  M  KN+++W  +I G ++ G   EA  LF  +   G+  D   +
Sbjct: 149 YSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVI 208

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             VL++ A    +   + +     +     + ++  SL+D Y KCG +E+A  +F     
Sbjct: 209 VRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVE 268

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D+V  ++MI  YA  GL  EA++L+ EM+   + PD +     L++CA+L A E G   
Sbjct: 269 KDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWA 328

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
              +    F+S+   G SL++ YAKCGS+++A   +  + ++  V ++A+I GLA +G+ 
Sbjct: 329 KGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQV 388

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
             A  +FGQM + G+ PN  T V +LC C HAGLV + +H+F SM   F + P  EHY C
Sbjct: 389 GAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGC 448

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           M+D+L RAG   EA  L+  MP +AN  VWG+LLG  R+++  ++ +H  + L  +EP  
Sbjct: 449 MVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWN 508

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S  +VLLSNIY+++  WD   K+R  + +  ++K PG SW+EV   V+ F VGD SH  S
Sbjct: 509 SGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLS 568

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
           ++IY KL+ +   L +AGY P  E  L DVEE EKE  L  HSEKLAVAF LI+T     
Sbjct: 569 QKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYV 628

Query: 722 IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           IRV KNLR+C DCH + + ISK+  REI++RD NRFH F +G+CSC  YW
Sbjct: 629 IRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 212/451 (47%), Gaps = 15/451 (3%)

Query: 52  LFDAIPERS-VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
           +F   P  S    +N++    V  D    AV  +  M  + I P+ F+ S ++ ACA   
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
              LG  IH    K G+D D+F    +V  Y+K G L DA  VF D+   ++VSW  +I 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           GC+       A+ LF+ +  S + P+ F     L+ACA +   E GR +   + +  +  
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           +  V   LVDMY KCGSM+EAR +F  M EK+++ W+ +I G+  NG   EA  LF  M 
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           +  V  D   +   L S AS  A+ +      L     F S+  +  SLID Y KCG +E
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           +A+ ++K     D V   ++I+  A +G    A  ++ +M    I P+      LL  C 
Sbjct: 359 EALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT 418

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIPDR 463
           +    + G+        F  MS  F+          +V++ A+ G +D+A      +P +
Sbjct: 419 HAGLVDDGRHY------FNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472

Query: 464 G-IVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             ++ W +++GG   H   + A  +  Q++E
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLAEHVLKQLIE 503



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 223/473 (47%), Gaps = 50/473 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC       LG+ +H +V  TGFD D FV  ++V  Y+KCG   D+ ++FD +  ++
Sbjct: 110 VLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKN 169

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW  +    +      EAV  F+ ++ SG+RP+ F +  ++ ACA  GD   GR I  
Sbjct: 170 VVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDR 229

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              + G   ++F A +LVDMY K G++E+A  VF  +   DIV W+A+I G   +     
Sbjct: 230 CMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPRE 289

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++LF +M+   + P+ +    AL +CA +   ELG      +   E  S+P++G  L+D
Sbjct: 290 AIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLID 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YAKCGSM+EA  ++ +M EK+ + +N VISG    G    A  +F  M + G+  ++ T
Sbjct: 350 FYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHT 409

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIVNSLIDAYGKCGHVEDAVKI 355
              +L           C   HA  V          S D+ V   I+ YG           
Sbjct: 410 FVGLL-----------CGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYG----------- 447

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
                         M+   A+ G  +EA  L   ++   +  +  V  SLL  C      
Sbjct: 448 -------------CMVDLLARAGFLDEAHNL---IKGMPMKANVIVWGSLLGGC----RL 487

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLV---NMYAKCGSIDDADRAFSEIPDRGI 465
            +  Q+  H++K     + +     V   N+Y+     D+A++  S + ++G+
Sbjct: 488 HRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGM 540


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/697 (35%), Positives = 400/697 (57%), Gaps = 19/697 (2%)

Query: 84  FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           ++ M+  G RP+ F+   ++  CA  G    GR  HG  IKLG + D+++ N+LV  YAK
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTS 202
           +G +EDA  VF  +   DIV+WN ++ G V +     AL  FQ+M  + E+  +     +
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIA 214

Query: 203 ALKACAGMELKEL-GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           AL AC  +E+  + G+++H  +I+  ++ D  VG  L+DMY KCG +  AR +F  MP +
Sbjct: 215 ALAACC-LEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
            ++ WN +I G+  N    EA   F  M  EG+  +  T   +L + A  ++    + VH
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
              V+  F     +  +L++ YGK G VE + KIF + +   LV+  +MI AY    +  
Sbjct: 334 GYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT 393

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EA+ L+LE+ ++ + PD F  S+++ A   L +    +Q+H +II  G+  +T   N+++
Sbjct: 394 EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVL 453

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MYA+ G +  +   F ++  + ++SW+ MI G A HG+GK AL+MF +M  +G+ PN  
Sbjct: 454 HMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNES 513

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T VSVL AC+ +GLV E   HF  M +++G+ P  EHY CM D+LGR G  +E ++ +++
Sbjct: 514 TFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIES 573

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP    + VWG+LL A+R   ++++ ++AAE +F +E + +  +++LS++YA AG W++V
Sbjct: 574 MPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDV 633

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA-------KLDEVSDL 674
            +VR  MK+  L++   +S +E+     +F  GD SH++S+ I+        K++E  D 
Sbjct: 634 ERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDDT 693

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
            N++  VP+          +    +   HS +LAV FGLI++  G+ I VKKN+RIC  C
Sbjct: 694 RNQSYPVPVA---------TRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHC 744

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + + IS+   R I+V D   +H F +GSC CG YW
Sbjct: 745 HHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 243/475 (51%), Gaps = 3/475 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K C     L  G   HG+V+  G + D +  NSLV  YAK G   D+ R+FD +P R 
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V+WN++   YV       A+  F+EM  +  ++ +   + + + AC     S+ G++IH
Sbjct: 173 IVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           GY I+ G + D+    +L+DMY K G +  A +VF  +    +V+WN +I G  L+E  D
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A   F QM++  +   + T  + L ACA  E    GR +H  +++ +     ++   L+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY K G ++ +  IF  +  K L++WN +I+ ++      EA +LF  +  + +  D  
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T+STV+ +     ++  C+Q+H+  +   +  +  I+N+++  Y + G V  + +IF + 
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM 472

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG- 418
            + D+++  +MI  YA  G G+ AL+++ EM+   + P+     S+L AC+     ++G 
Sbjct: 473 VSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGW 532

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
              ++ + ++G +        + ++  + G + +  +    +P D     W +++
Sbjct: 533 MHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLL 587



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 211/464 (45%), Gaps = 34/464 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC  +     G ++HG V+  G + D  V  SL+ MY KCG    +R +F  +P R+V
Sbjct: 216 LAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTV 275

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+WN +   Y   +  +EA   F +M   G++    +  +++ ACA +  SL GR +HGY
Sbjct: 276 VTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGY 335

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            ++  +   +    AL++MY KVG +E +  +F  I +  +VSWN +IA  +  E    A
Sbjct: 336 VVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEA 395

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + LF ++ +  + P+ FT ++ + A   +      RQ+H  +I +    + ++   ++ M
Sbjct: 396 ITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHM 455

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YA+ G +  +R IF  M  K++I+WN +I G+  +G    A  +F  M   G+  +++T 
Sbjct: 456 YARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +VL                A SV    +      N ++  YG    +E           
Sbjct: 516 VSVLT---------------ACSVSGLVDEGWMHFNLMLQEYGMIPQIE------HYGCM 554

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DL+     +    QF            ++   I+P S V  SLL A  N +  +  +  
Sbjct: 555 TDLLGREGDLREVLQF------------IESMPIDPTSRVWGSLLTASRNQNDIDIAEYA 602

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              I +     +T     L +MYA  G  +D +R    + ++G+
Sbjct: 603 AERIFQLEH-DNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 5/286 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC   +    G  VHG VV   F     +  +L+ MY K G    S ++F  I  ++
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++ + Y++ +   EA+  F E++   + P+ F++S+++ A    G     R+IH 
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHS 435

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y I LGY  +    NA++ MYA+ G++  +  +F  +   D++SWN +I G  +H     
Sbjct: 436 YIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKT 495

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG-L 238
           AL++F +MK + + PN  T+ S L AC+   L + G  +H +L+  E    P I   G +
Sbjct: 496 ALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG-WMHFNLMLQEYGMIPQIEHYGCM 554

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAA 283
            D+  + G + E       MP +     W  +++   +N  D++ A
Sbjct: 555 TDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTAS-RNQNDIDIA 599



 Score = 38.9 bits (89), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 6/142 (4%)

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
           +  SLV   A  G +D+A  A + +        + MI G A  G    AL  +  MLEDG
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDG 102

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQ 553
             P+  T   V+  C   G + E +     M  K G++   + Y C  ++    + G  +
Sbjct: 103 ARPDRFTFPVVVKCCARLGGLDEGRAA-HGMVIKLGLE--HDVYTCNSLVAFYAKLGLVE 159

Query: 554 EAMELVDTMPFQANASVWGALL 575
           +A  + D MP + +   W  ++
Sbjct: 160 DAERVFDGMPVR-DIVTWNTMV 180


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/701 (36%), Positives = 392/701 (55%), Gaps = 28/701 (3%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           ++ M+ A A S     G ++HG  +KLG+ SD    N L+DMYAK G L  A  VF  + 
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGR 217
             ++VSW A++ G + H      L+L   M+S S++ PN FT +++LKAC  +     G 
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H + ++   +   +V   LV +Y+K G + +AR +F     +NL+ WN +ISG+   G
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 278 GDMEAASLFPWMYR-----EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV--KTAFE 330
              ++  +F  M +     E    D+ T +++LK+  S  A     QVHA  V    +  
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 331 SDDYIVNSLIDAYGKCG-HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           S+  +  +L+D Y KC   +  A+++F      + +  T++I  +AQ G  +EA++L+  
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
                +  D  V SS++   A+ +  EQG+QVH + +K     D    NSL++MY KCG 
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGL 366

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
            D+A R F E+P R +VSW+AMI GL +HG G+EA+ MF +M  +GV P+ +  +++L A
Sbjct: 367 TDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSA 426

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H+GLV E + +F ++     ++P  EHYACM+D+LGRAG+  EA +LV TMP      
Sbjct: 427 CSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVG 486

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VW  LL A R++KNV VG+ A E L AI+ +    +V+LSNI+A AG W    +VR  M+
Sbjct: 487 VWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMR 546

Query: 630 DNKLKKEPGMSWIEV-KDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN-KAGYVP----- 682
              L+K+ G SW+EV K+  + +  GD SH R+ +I   L +V   +  + GY P     
Sbjct: 547 RRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSS 606

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAF------------GLIATPPGATIRVKKNLRI 730
             E  LHDV+E  + + L  HSE+LAV              G+  T     IRV KNLR+
Sbjct: 607 SSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRV 666

Query: 731 CVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           C DCH  F+ +S +V R ++VRD NRFH F +G CSC  YW
Sbjct: 667 CGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 271/524 (51%), Gaps = 21/524 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+A  +   +  G Q+HG ++  GF SD  + N+L+ MYAKCG    +  +F  +PER+
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSW +L   ++      E +     M  LS + PNEF+LS+ + AC   GD   G  IH
Sbjct: 70  VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  ++ G++     AN+LV +Y+K G + DA  VF      ++V+WNA+I+G     H  
Sbjct: 130 GACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGR 189

Query: 180 WALKLFQQMKS-----SEINPNMFTYTSALKACAGMELKELGRQLHCSLI--KMEIKSDP 232
            +L +F++M+       +  P+ FT+ S LKAC  +     G Q+H +++   +   S+ 
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249

Query: 233 IVGVGLVDMYAKCGS-MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
           I+   L+DMY KC   +  A  +F+ + +KN I W  VI GH Q G   EA  LF   + 
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWS 309

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
            GV  D   LS+V+   A F  +   +QVH  +VKT    D  + NSLID Y KCG  ++
Sbjct: 310 SGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDE 369

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A + F+E  A ++V+ T+MI    + G G+EA+ ++ EM+   + PD     +LL+AC++
Sbjct: 370 AARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSH 429

Query: 412 LSAYEQGKQVHV---HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS- 467
               E+ ++      H  +    ++ +A   +V++  + G + +A    + +P    V  
Sbjct: 430 SGLVEECRRYFSAIRHDRRLRPRAEHYA--CMVDLLGRAGELSEAKDLVATMPMAPTVGV 487

Query: 468 WSAMIGGLAQHGR---GKEALQMFGQMLEDGVLP-NHITLVSVL 507
           W  ++     H     G+EA +    +  DG  P N++ L ++ 
Sbjct: 488 WQTLLSACRVHKNVTVGREAGETL--LAIDGDNPVNYVMLSNIF 529


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/662 (36%), Positives = 382/662 (57%), Gaps = 4/662 (0%)

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
           G+  LG+ +H   ++     D+   N L+ +Y K G L  A  VF  +   + VS N ++
Sbjct: 30  GELSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           +G      +  AL L   ++ ++   N +  +SA+ A A +   ++GRQ H   IK  + 
Sbjct: 89  SGYASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
             P V   ++ MY +C  MDEA  +F  +   N+ A+N +I+G L  G    + S+   M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            R    +D  +   VL   AS + + +  QVH  ++K   E + Y+ ++L+D YGKC   
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 265

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            +A ++F+     ++V+ T+++TAY Q  L E+AL+L+L+M+   + P+ F  +  LN+C
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           A L+  + G  +    +K G        N+L+NMY+K GS++DA R F  +P R +VSW+
Sbjct: 326 AGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWN 385

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           ++I G A HGR +EA++ F  ML    +P+++T + VL AC   GLV E  ++   M K+
Sbjct: 386 SIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKE 445

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
            G++P +EHY CM+ +L R G+  EA   +++     +   W +LL + ++Y+N  +G  
Sbjct: 446 VGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHR 505

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
            AE +F ++P+   T+VLLSN+YA A  WD V KVRR M++  ++KEPG+SWI+V  +V+
Sbjct: 506 VAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVH 565

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            FT  D+ H   ++I  KL E+ D +   GYVP +   LHDVE+ +KE+ L +HSEKLA+
Sbjct: 566 VFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLAL 625

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AFGLI TP G  IR+ KN+RIC DCH + + IS    R I+VRD  RFH   +G CSC  
Sbjct: 626 AFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDD 685

Query: 770 YW 771
           YW
Sbjct: 686 YW 687



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 237/466 (50%), Gaps = 8/466 (1%)

Query: 10  DLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           +L LG  VH  VV    FD  ++  N+L+ +Y KCG    +R++FDA+P R+ VS N L 
Sbjct: 31  ELSLGKAVHARVVRAARFDVVQY--NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S Y       +A+   +   ++    NE+ LSS + A A      +GR+ HGY+IK G  
Sbjct: 89  SGYASSGRHRDALALLR---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
              +  +A++ MY +  ++++AV VF ++   ++ ++N++I G +     D +  + + M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
             +    +  +Y + L  CA  +   LG Q+H   +K  ++ +  VG  LVDMY KC   
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 265

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            EA  +F ++PEKN+++W  +++ + QN    +A  LF  M  EGV  ++ T +  L S 
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           A    +     + A ++KT       + N+L++ Y K G VEDA ++F      D+V+  
Sbjct: 326 AGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWN 385

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIK 427
           S+I  YA  G   EA++ + +M   E  P       +L+ACA L   ++G   +++ + +
Sbjct: 386 SIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKE 445

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAF-SEIPDRGIVSWSAMI 472
            G          +V +  + G +D+A+R   S      +V+W +++
Sbjct: 446 VGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLL 491


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/680 (35%), Positives = 398/680 (58%), Gaps = 3/680 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A  +      G QVH   V  G D++ FV +SL+ +YAKCG   D+  +FD   E++
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKN 265

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WN++ +  V  ++  EA+  F  M   G+  +EF+  S++ ACA      LGR++  
Sbjct: 266 VVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQC 325

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK   D+ +F ANA +DM++K G ++DA  +F  I + D VSWNA++ G   +E ++ 
Sbjct: 326 VTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEE 385

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ + + M    + P+  ++ + + AC+ +   E G+Q+HC  +K  I S+  VG  L+D
Sbjct: 386 AIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLID 445

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y+K G ++  R +   +   +++  N++I+G +QN  + EA  LF  + R+G+     T
Sbjct: 446 FYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFT 505

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-SLIDAYGKCGHVEDAVKIFKE- 358
            S++L       +  + KQVH  ++K+ F +DD  V  SL+  Y K    EDA K+  E 
Sbjct: 506 FSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEM 565

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               +LV  T++++ YAQ G   ++L  +  M+  +++PD    +S+L AC+ ++A   G
Sbjct: 566 PDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDG 625

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
           K++H  IIK GF S   A +++++MY+KCG I  +  AF E+  +  I  W++MI G A+
Sbjct: 626 KEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAK 685

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           +G   EAL +F +M +  +  + +T + VL AC HAGL++E +H+F+SM K +GI P  +
Sbjct: 686 NGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVD 745

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HYAC ID+LGR G  QEA E+++ +PF+ +  +W   L A R++K+ E G+ AA+ L  +
Sbjct: 746 HYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVEL 805

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP+ SST+VLLSN+YA+AG W      R  M++    K PG SWI V +K   F V D++
Sbjct: 806 EPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKN 865

Query: 658 HARSKEIYAKLDEVSDLLNK 677
           H  +  IY  LD ++ +++K
Sbjct: 866 HLGALRIYEMLDNLTRMMHK 885



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 166/555 (29%), Positives = 298/555 (53%), Gaps = 5/555 (0%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP-ERSVVSWNSLFSCYVHCDFLE-EAVC 82
           G   D     ++V      G   D+R L   +P   S V+WN++ S Y     +E E   
Sbjct: 127 GSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFG 186

Query: 83  FFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA 142
            +K+M   G+ P   + +SM++A A +   + GR++H  +++ G D+++F  ++L+++YA
Sbjct: 187 LYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYA 246

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K G + DA+ VF      ++V WNA++ G V +E+   A+++F  MK   +  + FTY S
Sbjct: 247 KCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVS 306

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            L ACA ++   LGRQ+ C  IK  + +   V    +DM++K G++D+A+ +F+L+  K+
Sbjct: 307 VLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKD 366

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            ++WN ++ G   N  D EA  +   M  +GV  D+ + +TV+ + ++ +A    KQ+H 
Sbjct: 367 TVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHC 426

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           L++K +  S+  + +SLID Y K G VE   K+  +  A  +V    +I    Q    +E
Sbjct: 427 LAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDE 486

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLV 441
           A+ L+ ++    + P SF  SS+L+ C  L +   GKQVH + +K GF++ DT  G SLV
Sbjct: 487 AIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLV 546

Query: 442 NMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
             Y K    +DA++   E+PD + +V W+A++ G AQ+G   ++L  F +M    V P+ 
Sbjct: 547 GTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDE 606

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           +T  S+L AC+    +++ K     +  K G    +   + +ID+  + G    + E   
Sbjct: 607 VTFASILKACSEMTALSDGK-EIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFK 665

Query: 561 TMPFQANASVWGALL 575
            +  + + ++W +++
Sbjct: 666 ELKSKQDITLWNSMI 680



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 219/424 (51%), Gaps = 37/424 (8%)

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G+RP++F L++ ++AC+  G  + G++ H  + K G  S  F A ALV+MYA+ G + DA
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
             VF  I  PD V W ++I+G         A+ LF +M+                     
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRME--------------------- 124

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIV 269
                         KM    D +  V +V      G +++AR + H MP   + +AWN V
Sbjct: 125 --------------KMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAV 170

Query: 270 ISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           ISG+ Q  G + E   L+  M   G+   ++T +++L + A+  A    +QVHA +V+  
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHG 230

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            +++ ++ +SLI+ Y KCG + DA+ +F  S   ++V   +M+    +     EA++++L
Sbjct: 231 LDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFL 290

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M+   +  D F   S+L ACA+L ++  G+QV    IK    +  F  N+ ++M++K G
Sbjct: 291 YMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFG 350

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           +IDDA   F+ I  +  VSW+A++ GL  +   +EA+ M   M  DGV P+ ++  +V+ 
Sbjct: 351 AIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVIN 410

Query: 509 ACNH 512
           AC++
Sbjct: 411 ACSN 414



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 73/132 (55%)

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           + PD F  ++ L+AC+ L A   GKQ H    K G  S  F   +LVNMYA+CG + DA 
Sbjct: 27  VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           R F  I     V W++MI G  + GR +EA+ +F +M + G  P+ +T V+V+CA    G
Sbjct: 87  RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146

Query: 515 LVAEAKHHFESM 526
            + +A+     M
Sbjct: 147 RLEDARTLLHRM 158


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/681 (35%), Positives = 401/681 (58%), Gaps = 1/681 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++AC  +     G QVH  V+ +GF  D +V  SLVV+YAK G    +R +FD +  ++
Sbjct: 148 IIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKT 207

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++ + Y      E ++  F  M+ S + P+++ LSS++NAC+  G    G++IH 
Sbjct: 208 PVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHA 267

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++     D+ + N L+D Y K G ++   A+F  ++  +I+SW  +IAG + + ++  
Sbjct: 268 YVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWE 327

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  +M      P+ +  +S L +C  ++  + GRQ+H  +IK+ ++ D  V   L+D
Sbjct: 328 AVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALID 387

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC ++D+A+ +F ++   +++ +N +I G+ + G    A  +F  M  + V     T
Sbjct: 388 MYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLT 447

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L   A+   + + KQ+H L +K  F  D +  ++LID Y KC  + DA  +F+ ++
Sbjct: 448 FVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTT 507

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V   S+ + Y      EEA KLY ++Q     P+ F  ++L  A + L++   G+Q
Sbjct: 508 NKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQ 567

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H  ++K G  SD F  N+LV+MYAKCGS+++A++ FS    +    W++MI   AQHG+
Sbjct: 568 FHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGK 627

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +EAL+MF  M+ + + PN++T VSVL AC+H G V +   H+ SM  ++GI+P  EHYA
Sbjct: 628 VEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSM-ARYGIEPGIEHYA 686

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
            ++ +LGRAG+  EA E ++ M  +  A VW +LL A R++ NVE+ +HAAEM  +I+P 
Sbjct: 687 SVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPM 746

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S ++V+LSNI+AS GMW +V ++R  M  N + KEPG SWIEV  +V+ F   D+ H  
Sbjct: 747 DSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDE 806

Query: 661 SKEIYAKLDEVSDLLNKAGYV 681
           +  IY  LDE++  +   G V
Sbjct: 807 TDLIYLALDELTTQMKDVGCV 827



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/588 (30%), Positives = 308/588 (52%), Gaps = 7/588 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A  S K +    +VH  VV  G   D F++N L+  Y K G+  D+  LFD +P R+
Sbjct: 46  LLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRN 105

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VSW+S+ S Y    + E+A+ +F E   + + + NE+ L+S+I AC        G ++H
Sbjct: 106 LVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVH 165

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            Y IK G+  D++   +LV +YAK G ++ A  VF  +     V+W A+I G      ++
Sbjct: 166 SYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSE 225

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            +L+LF  M  S + P+ +  +S L AC+ +   + G+Q+H  +++ E K D      L+
Sbjct: 226 VSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLI 285

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D Y KCG +   + +F  +  KN+I+W  +I+G++QN  D EA  L   M+R G   D+ 
Sbjct: 286 DFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEY 345

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
             S+VL S  S  A+   +Q+H+  +K   E D+++ N+LID Y KC  ++DA ++F   
Sbjct: 346 ACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVV 405

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +   +V   +MI  Y++ G    AL+++ EM+ + ++P      SLL   A L   +  K
Sbjct: 406 TCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSK 465

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  IIK+GF  D F  ++L+++Y+KC  I DA   F    ++ IV W+++  G     
Sbjct: 466 QIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQL 525

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH--HFESMEKKFGIQPMQE 537
           + +EA +++  +      PN  T  ++  A   A ++A   H   F +   K G++    
Sbjct: 526 KSEEAFKLYSDLQLSRERPNEFTFAALTTA---ASILASLPHGQQFHNQVMKMGLESDPF 582

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
               ++D+  + G  +EA ++  +  ++  A  W +++     +  VE
Sbjct: 583 ITNALVDMYAKCGSVEEAEKIFSSSVWKDTA-CWNSMISMYAQHGKVE 629



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 222/408 (54%), Gaps = 1/408 (0%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +L++++ A   +   L  RK+H   +  G   D+F +N L+  Y K+G++ DA  +F  +
Sbjct: 42  ALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKM 101

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP-NMFTYTSALKACAGMELKELG 216
            + ++VSW++V++      +N+ AL  F + + + ++  N +   S ++AC   +  E G
Sbjct: 102 PNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPG 161

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
            Q+H  +IK     D  VG  LV +YAK G +D+AR++F  +  K  + W  +I+G+ ++
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G    +  LF  M    V  D+  LS++L + +    +   KQ+HA  +++  + D    
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N LID Y KCG V+    +F      ++++ T+MI  Y Q     EA++L  EM      
Sbjct: 282 NVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWK 341

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD + CSS+L +C ++ A + G+Q+H ++IK     D F  N+L++MY+KC ++DDA R 
Sbjct: 342 PDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRV 401

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           F  +    +V ++AMI G ++ G    AL++F +M    V P+ +T V
Sbjct: 402 FDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFV 449



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 9/297 (3%)

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           + P    + V      L+ +L +  S ++I   ++VH   V    + D ++ N L+ +Y 
Sbjct: 27  MLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYF 86

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP-DSFVCS 403
           K G V DA  +F +    +LV+ +S+++ Y Q G  E+AL  +LE Q   ++  + ++ +
Sbjct: 87  KIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILA 146

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           S++ AC      E G QVH ++IK GF  D + G SLV +YAK G ID A   F  +  +
Sbjct: 147 SIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLK 206

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-- 521
             V+W+A+I G  + GR + +LQ+F  M+E  V+P+   L S+L AC+  G +   K   
Sbjct: 207 TPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIH 266

Query: 522 -HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +    E K  +      Y  +ID   + G+ +    L D +  + N   W  ++  
Sbjct: 267 AYVLRSETKMDVST----YNVLIDFYTKCGRVKAGKALFDRLDVK-NIISWTTMIAG 318


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/586 (39%), Positives = 356/586 (60%), Gaps = 6/586 (1%)

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           E NP   T+   + +CA       G  +H  L+      DP +   L++MY + GS+D A
Sbjct: 73  EPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRA 132

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA-- 309
           R +F    E+ +  WN +       G   E   L+  M   G+  D+ T + VLK+    
Sbjct: 133 RKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVS 192

Query: 310 --SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
             S   +   K++HA  ++  +E++ +++ +L+D Y K G V  A  +F      + V+ 
Sbjct: 193 ELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252

Query: 368 TSMITAYAQFGLGEEALKLY--LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           ++MI  +A+  +  +AL+L+  + ++  +  P+S    ++L ACA L+A EQGK +H +I
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYI 312

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           ++ G  S     N+L+ MY +CG I    R F  + +R +VSW+++I     HG GK+A+
Sbjct: 313 LRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAI 372

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           Q+F  M+  G  P++I+ ++VL AC+HAGLV E K  FESM  K+ I P  EHYACM+D+
Sbjct: 373 QIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 432

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
           LGRA +  EA++L++ M F+   +VWG+LLG+ RI+ NVE+ + A+ +LF +EP  +  +
Sbjct: 433 LGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNY 492

Query: 606 VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
           VLL++IYA A MW     V + ++   L+K PG SWIEVK KVY+F   D  + + +EI+
Sbjct: 493 VLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIH 552

Query: 666 AKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
           A L ++S+ +   GYVP     L+D++E EKE+++  HSEKLAVAFGLI T  G TIR++
Sbjct: 553 ALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIR 612

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KNLR+C DCH   +FISK  +REI+VRDVNRFHHF++G CSCG YW
Sbjct: 613 KNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 192/393 (48%), Gaps = 8/393 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P + +   +I +CA       G  +H   +  G+D D F A  L++MY ++G+++ A  V
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F +     I  WNA+     +       L L+ QM    I  + FTYT  LKAC   EL 
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 214 ----ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
               + G+++H  +++   +++  V   L+D+YAK GS+  A  +F  MP KN ++W+ +
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           I+   +N   M+A  LF  M  E      +  T+  VL++ A   A+   K +H   ++ 
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +S   ++N+LI  YG+CG +    ++F      D+V+  S+I+ Y   G G++A++++
Sbjct: 316 GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
             M  +  +P      ++L AC++    E+GK +   ++ K+           +V++  +
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435

Query: 447 CGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
              +D+A +   ++  + G   W +++G    H
Sbjct: 436 ANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIH 468



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 193/373 (51%), Gaps = 29/373 (7%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           +C  +  L  GL VH  +V +GFD D F+A  L+ MY + G+   +R++FD   ER++  
Sbjct: 87  SCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYV 146

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL----LGRKIH 119
           WN+LF         +E +  + +M   GI  + F+ + ++ AC  S  S+     G++IH
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIH 206

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + ++ GY++++     L+D+YAK G++  A +VF  +   + VSW+A+IA    +E   
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266

Query: 180 WALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            AL+LFQ M  ++ +  PN  T  + L+ACAG+   E G+ +H  +++  + S   V   
Sbjct: 267 KALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNA 326

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+ MY +CG +   + +F  M  +++++WN +IS +  +G   +A  +F  M  +G    
Sbjct: 327 LITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSV---KTAFES--DDYIVNS-------LIDAYGK 345
             +  TVL         G C   HA  V   K  FES    Y ++        ++D  G+
Sbjct: 387 YISFITVL---------GACS--HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435

Query: 346 CGHVEDAVKIFKE 358
              +++A+K+ ++
Sbjct: 436 ANRLDEAIKLIED 448



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 140/258 (54%), Gaps = 7/258 (2%)

Query: 1   VLKACT----SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VLKAC     S   L  G ++H  ++  G++++  V  +L+ +YAK G+   +  +F A+
Sbjct: 185 VLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM 244

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACAGSGDSLL 114
           P ++ VSW+++ +C+   +   +A+  F+ M+L      PN  ++ +++ ACAG      
Sbjct: 245 PTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQ 304

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G+ IHGY ++ G DS +   NAL+ MY + G +     VF ++++ D+VSWN++I+   +
Sbjct: 305 GKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGM 364

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPI 233
           H     A+++F+ M     +P+  ++ + L AC+   L E G+ L  S++ K  I     
Sbjct: 365 HGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGME 424

Query: 234 VGVGLVDMYAKCGSMDEA 251
               +VD+  +   +DEA
Sbjct: 425 HYACMVDLLGRANRLDEA 442



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 10/181 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC     L  G  +HG ++  G DS   V N+L+ MY +CG  +  +R+FD +  R 
Sbjct: 292 VLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRD 351

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS-----GDSLLG 115
           VVSWNSL S Y    F ++A+  F+ M+  G  P+  S  +++ AC+ +     G  L  
Sbjct: 352 VVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFE 411

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
             +  Y I  G    M     +VD+  +   L++A+ + +D+   P    W +++  C +
Sbjct: 412 SMLSKYRIHPG----MEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRI 467

Query: 175 H 175
           H
Sbjct: 468 H 468


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 209/369 (56%), Positives = 273/369 (73%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           + +L ACA+++A EQGKQVH  IIK GF  D    N LV+MY KCG I+DA   FS++ +
Sbjct: 2   AGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLE 61

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
             + SW+AMI GLAQHG GKEA+ +F QML+ GV PN IT V VL  C+HAGLV E +++
Sbjct: 62  PDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNY 121

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           F+SM +  GI P  EHY+CM+D+ GRAG   EA+  ++ MP + NASVWG+LLGA R++ 
Sbjct: 122 FDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHG 181

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N+E+ + A E L  + PE   T+VLLSNIYA+AG WD+  KVR+ MKD  +KKEPG SWI
Sbjct: 182 NIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWI 241

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           EV++KV+ F VGD SH + +EIY  L+ ++  +  AGY+P     LHDVEE +KE +L H
Sbjct: 242 EVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGH 301

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFG+I+TPPG TIRV KNLR+C DCHT+ +FIS+IVSREI++RD +RFHHF++
Sbjct: 302 HSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKD 361

Query: 763 GSCSCGGYW 771
           G CSCG YW
Sbjct: 362 GQCSCGDYW 370



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 26/254 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC S   L  G QVH  ++  GF+ D  V+N LV MY KCG   D++ +F  + E  
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR---- 116
           V SWN++ S        +EAV  F++M+ +G++PN+ +   +++ C+ +G    GR    
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 117 ---KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
              + HG S K  + S M      VD++ + G L++A+     +   P+   W +++  C
Sbjct: 124 SMTRDHGISPKAEHYSCM------VDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGAC 177

Query: 173 VLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAG-----------MELKELGRQLH 220
            +H + + A +  +Q+ + +  NP  +   S + A AG           M+ + + ++  
Sbjct: 178 RVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPG 237

Query: 221 CSLIKMEIKSDPIV 234
           CS I+++ K  P +
Sbjct: 238 CSWIEVQNKVHPFI 251



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 3/187 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           ++ ++ ACA       G+++H   IK+G++ D+  +N LVDMY K G +EDA  VF  + 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
            PD+ SWNA+I+G   H     A+ LF+QM  + + PN  T+   L  C+   L + GR 
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 219 LHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQN 276
              S+ +   I         +VD++ + G +DEA    + MP E N   W  ++ G  + 
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLL-GACRV 179

Query: 277 GGDMEAA 283
            G++E A
Sbjct: 180 HGNIELA 186



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 104/195 (53%), Gaps = 2/195 (1%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++ +L++ AS  A+   KQVHA  +K  FE D  + N L+D YGKCG +EDA ++F +  
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ +  +MI+  AQ G G+EA+ L+ +M    + P+      +L+ C++    ++G+ 
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
               + +  G        + +V+++ + G +D+A    +++P     S W +++G    H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 479 GRGKEALQMFGQMLE 493
           G  + A +   Q++E
Sbjct: 181 GNIELAERAVEQLIE 195



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 38/264 (14%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L+ACA +   E G+Q+H  +IK+  + D  V  GLVDMY KCG +++A+ +F  + E ++
Sbjct: 5   LRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDV 64

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            +WN +ISG  Q+G   EA  LF  M + GV  +Q T   VL   +           HA 
Sbjct: 65  ASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCS-----------HAG 113

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            V    E  +Y  +S+   +G              S   +  +C  M+  + + G  +EA
Sbjct: 114 LVD---EGRNYF-DSMTRDHGI-------------SPKAEHYSC--MVDLFGRAGCLDEA 154

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LV 441
           L    +M    + P++ V  SLL AC      E  ++    +I+   ++    G    L 
Sbjct: 155 LNFINQM---PVEPNASVWGSLLGACRVHGNIELAERAVEQLIE---LTPENPGTYVLLS 208

Query: 442 NMYAKCGSIDDADRAFSEIPDRGI 465
           N+YA  G  DDA +    + DR +
Sbjct: 209 NIYAAAGRWDDAGKVRKMMKDRSV 232


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/648 (36%), Positives = 368/648 (56%), Gaps = 7/648 (1%)

Query: 42  KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLS 100
           K G+  ++RR+FD + ++  +SW +L S YV+ +   EA+  FK M V SG+R + F LS
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
               AC  + D   G  +HGY++K G  + +F  +AL+DMY K G + +   VF ++   
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+I G V   +N  AL  F +M  S +  + +T+  ALKACA       GR++H
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              +K        V   L  MY KCG ++    +F  M  +++++W  +I+  +Q G + 
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
            A   F  M    V  ++ T + V+   A+   I   +Q+HAL +     +   + NS++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y KCG +  +  IF E +  D+V+ +++I  Y Q G   EA +L   M+     P  F
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEF 420

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+L+AC N++  E GKQ+H +++  G        ++L+NMY KCGSI++A R F   
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAA 480

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            +  IVSW+AMI G A+HG  +E + +F ++   G+ P+ +T + VL AC+HAGLV    
Sbjct: 481 ENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGF 540

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
           H+F +M KK+ I P +EHY CMID+L RAG+  +A  +++ MPF  +  VW  LL A R+
Sbjct: 541 HYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRV 600

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           + +VE G+  AE +  +EP  + TH+ L+NIYAS G W   A +R+ MK   + KEPG S
Sbjct: 601 HGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWS 660

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLD------EVSDLLNKAGYVP 682
           WI+VKD V+ F  GDRSH + ++IY  LD      E++D + + G++P
Sbjct: 661 WIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLP 708



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 269/520 (51%), Gaps = 28/520 (5%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           KAC    D+  G  +HG  V TG  +  FV ++L+ MY K G   + RR+F  +P R+VV
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           SW ++ +  V   + +EA+ +F EM  S +  + ++ +  + ACA SG    GR+IH  +
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           +K G+D   F AN L  MY K G LE  + +F+ +   D+VSW  +I   V     + A+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           + F +M+ S+++PN +T+ + +  CA +   E G QLH  ++ + + +   V   ++ MY
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           AKCG +  + +IFH M  +++++W+ +I+G+ Q G   EA  L  WM  EG    +  L+
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALA 423

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           +VL +  +   +   KQ+HA  +    E    ++++LI+ Y KCG +E+A +IF  +   
Sbjct: 424 SVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEND 483

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           D+V+ T+MI  YA+ G   E + L+ ++    + PDS     +L+AC+           H
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACS-----------H 532

Query: 423 VHIIKFGF-----MSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIP-DRGIVSWS 469
             ++  GF     MS  +  +        ++++  + G + DA+     +P  R  V WS
Sbjct: 533 AGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592

Query: 470 AMIGGLAQHG---RGKEALQMFGQMLEDGVLPNHITLVSV 506
            ++     HG   RG+   +   Q LE      HITL ++
Sbjct: 593 TLLRACRVHGDVERGRRTAERILQ-LEPNCAGTHITLANI 631



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 229/433 (52%), Gaps = 2/433 (0%)

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           +D+  +N  +    K G+L +A  +F  +   D +SW  +I+G V    +  AL LF+ M
Sbjct: 47  TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM 106

Query: 189 K-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +  S +  + F  + A KAC        G  LH   +K  + +   VG  L+DMY K G 
Sbjct: 107 RVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGK 166

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           + E R +FH MP +N+++W  +I+G ++ G + EA   F  M+R  V +D  T +  LK+
Sbjct: 167 IFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKA 226

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            A   A+   +++HA ++K  F+   ++ N+L   Y KCG +E  + +F++ S  D+V+ 
Sbjct: 227 CADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSW 286

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T++IT   Q G  E A++ ++ M++ +++P+ +  +++++ CANL+  E G+Q+H  I+ 
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH 346

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  +     NS++ MYAKCG +  +   F E+  R IVSWS +I G  Q G   EA ++
Sbjct: 347 LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFEL 406

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
              M  +G  P    L SVL AC +  ++   K    +     G++      + +I++  
Sbjct: 407 LSWMRMEGPKPTEFALASVLSACGNMAILEHGK-QLHAYVLSIGLEHTAMVLSALINMYC 465

Query: 548 RAGKFQEAMELVD 560
           + G  +EA  + D
Sbjct: 466 KCGSIEEASRIFD 478



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 222/503 (44%), Gaps = 54/503 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC     L  G ++H   +  GFD   FVAN+L  MY KCG       LF+ +  R V
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ +  V     E AV  F  M  S + PNE++ +++I+ CA       G ++H  
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            + LG  + +   N+++ MYAK G L  +  +F ++   DIVSW+ +IAG     H   A
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEA 403

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            +L   M+     P  F   S L AC  M + E G+QLH  ++ + ++   +V   L++M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCGS++EA  IF      ++++W  +I+G+ ++G   E   LF  + R G+  D  T 
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523

Query: 302 STVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
             VL   S A    +G     +A+S K            +ID   + G + DA  +    
Sbjct: 524 IGVLSACSHAGLVDLGF-HYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMI--- 579

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                                 EA+  +          D  V S+LL AC      E+G+
Sbjct: 580 ----------------------EAMPFH---------RDDVVWSTLLRACRVHGDVERGR 608

Query: 420 QVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGIVS---WS----- 469
           +    I++   +    AG   +L N+YA  G   +A      +  +G++    WS     
Sbjct: 609 RTAERILQ---LEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVK 665

Query: 470 ----AMIGGLAQHGRGKEALQMF 488
               A + G   H +G++   M 
Sbjct: 666 DLVFAFVAGDRSHPQGEDIYNML 688



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C +   +  G Q+H +++  G  +   V NS++ MYAKCG    S  +F  +  R 
Sbjct: 324 VISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW+++ + Y     + EA      M + G +P EF+L+S+++AC        G+++H 
Sbjct: 384 IVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHA 443

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y + +G +      +AL++MY K G++E+A  +F   E+ DIVSW A+I G   H ++  
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSRE 503

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LV 239
            + LF+++    + P+  T+   L AC+   L +LG     ++ K    S      G ++
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMI 563

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           D+  + G + +A  +   MP  ++ + W+ ++
Sbjct: 564 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 8/189 (4%)

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C +L   E+        I F   +D    N  +    K G + +A R F ++  +  +SW
Sbjct: 24  CIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISW 83

Query: 469 SAMIGGLAQHGRGKEALQMFGQM-LEDGVL--PNHITLVSVLCACNHAGLVAEAKHHFES 525
           + +I G        EAL +F  M +E G+   P  ++L    C  N      E  H +  
Sbjct: 84  TTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAV 143

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNV 584
              K G+       + ++D+  + GK  E   +   MP + N   W A++ G  R   N 
Sbjct: 144 ---KTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSWTAIITGLVRAGYNK 199

Query: 585 EVGQHAAEM 593
           E   + +EM
Sbjct: 200 EALVYFSEM 208


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/769 (33%), Positives = 421/769 (54%), Gaps = 18/769 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L++C++  +   G ++H  VV  G + +  +  +LV +Y KC   ++  +L   + +  V
Sbjct: 124 LRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDV 183

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA--GSGDSLLGRKIH 119
           VSW ++ S  V      EA+  + +M+ +GI PNEF+   ++   +  G G    G+ +H
Sbjct: 184 VSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGY-GKVLH 242

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              I  G + ++    A++ MYAK   +EDA+ V +     D+  W ++I+G V +    
Sbjct: 243 SQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVR 302

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+     M+ S I PN FTY S L A + +   ELG Q H  +I + ++ D  VG  LV
Sbjct: 303 EAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALV 362

Query: 240 DMYAKCG-SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           DMY KC  +       F  +   N+I+W  +I+G  ++G + E+  LF  M   GV  + 
Sbjct: 363 DMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNS 422

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            TLST+L + +  ++I   K++H   +KT  + D  + N+L+DAY   G  ++A  +   
Sbjct: 423 FTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGM 482

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  D++  T++     Q G  E AL++   M + E+  D F  +S ++A A L   E G
Sbjct: 483 MNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETG 542

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H +  K GF       NSLV+ Y+KCGS+ DA R F +I +   VSW+ +I GLA +
Sbjct: 543 KQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASN 602

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G   +AL  F  M   GV P+ +T +S++ AC+   L+ +   +F SMEK + I P  +H
Sbjct: 603 GLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDH 662

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y C++D+LGR G+ +EAM +++TMPF+ ++ ++  LL A  ++ NV +G+  A     ++
Sbjct: 663 YVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELD 722

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P   + ++LL+++Y +AG+ D   K R+ M++  L++ P   W+EVK K+Y F+   R  
Sbjct: 723 PCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLFSA--REK 780

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
             + EI  KL+ +   +   GY           +ESE +    +HSE+LA+AFG+++ P 
Sbjct: 781 IGNDEINEKLESLITEIKNRGY---------PYQESEDK---LYHSEQLALAFGVLSVPT 828

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
            A IR+ KN  IC  CH+    +++ V REIIVRD  RFH F++G CSC
Sbjct: 829 LAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877



 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 168/535 (31%), Positives = 282/535 (52%), Gaps = 8/535 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S+  L  G  VH  ++  G   D +++N+L+ +YAKC     +R LFD +P R 
Sbjct: 23  VLSLCNSQT-LKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRD 81

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW +L S +       EA+  F  M+ SG  PNEF+LSS + +C+  G+   G KIH 
Sbjct: 82  VVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHA 141

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +KLG + +      LVD+Y K     +   +   ++  D+VSW  +I+  V  E + W
Sbjct: 142 SVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLV--ETSKW 199

Query: 181 --ALKLFQQMKSSEINPNMFTYTSALKACAGMEL-KELGRQLHCSLIKMEIKSDPIVGVG 237
             AL+L+ +M  + I PN FT+   L   + + L K  G+ LH  LI   ++ + ++   
Sbjct: 200 SEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTA 259

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           ++ MYAKC  M++A  +    P+ ++  W  +ISG +QN    EA +    M   G+  +
Sbjct: 260 IICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPN 319

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIF 356
             T +++L + +S  ++ + +Q H+  +    E D Y+ N+L+D Y KC H   + VK F
Sbjct: 320 NFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAF 379

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +  +  ++++ TS+I  +A+ G  EE+++L+ EMQ   + P+SF  S++L AC+ + +  
Sbjct: 380 RGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSII 439

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           Q K++H +IIK     D   GN+LV+ YA  G  D+A      +  R I++++ +   L 
Sbjct: 440 QTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLN 499

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKF 530
           Q G  + AL++   M  D V  +  +L S + A    G++   K  H  S +  F
Sbjct: 500 QQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGF 554


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/684 (37%), Positives = 388/684 (56%), Gaps = 37/684 (5%)

Query: 117 KIHGYSIKLGYDSD-MFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           +IH  +IK G  S+ +F    ++    K  G++  A  VF +I  P +  WN +I G   
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKA-CAGMELKELGRQLHCSLIKMEIKSDPI 233
              ++  + L++ M    I P+ FT+   LK     M LK     L+ ++I   + S+  
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLF 172

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-- 291
           V  G + +++ CG ++ AR IF +     ++ WN+V+SG+ +     E+  LF  M +  
Sbjct: 173 VQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKC 232

Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVE 350
           E V  +  TL  +L + +  + +   K ++   +K      + I+ N+LID +  CG ++
Sbjct: 233 ECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMD 292

Query: 351 DAVKIFKESSAVDLVACTSMITAYA-------------------------------QFGL 379
            A  +F E    D+++ TS++T +A                               +   
Sbjct: 293 AARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNR 352

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            +E L L+ +MQ   + PD F   S+L ACA+L A E G+    +I K    +DTF GN+
Sbjct: 353 FKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNA 412

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY KCG+++ A + F+E+  +   +W+AMI GLA +G G+EAL MF  MLE  V P+
Sbjct: 413 LIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPD 472

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            IT + V+CAC H GLVA+ KH F +M  + GI+P   HY CM+D+LGRAG  +EA+E++
Sbjct: 473 EITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVI 532

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
             MP + N+ VWG+LLGA R++KNV++ + AA  +  +EPE  + +VLL NIYA+   W 
Sbjct: 533 MNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWK 592

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           N+  VR+ M +  +KK PG S +E+   VY F  GD+SH +SKEIYAKL+ +   L+ AG
Sbjct: 593 NLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAG 652

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           Y P       DV E +KE  LY HSEKLA+A+ LI++  G TIR+ KNLR+CVDCH    
Sbjct: 653 YSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAM 712

Query: 740 FISKIVSREIIVRDVNRFHHFRNG 763
            +SK+ +RE+IVRD  RFHHFR+G
Sbjct: 713 VVSKVYNRELIVRDKTRFHHFRHG 736



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 259/561 (46%), Gaps = 45/561 (8%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVM--YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H   + TG  S+      +++     + G+   +R++FD IP+ SV  WN++   Y  
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMF 132
            +  E  V  +K M++  I+P+ F+   ++           G+ +  +++  G+ DS++F
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLF 172

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM--KS 190
                + +++  G +  A  +F   +  ++V+WN V++G    +  + + +LF +M  K 
Sbjct: 173 VQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKC 232

Query: 191 SEINPNMFTYTSALKACAGMELKEL--GRQLHCSLIKMEI-KSDPIVGVGLVDMYAKCGS 247
             ++PN  T    L AC+  +LK+L  G+ ++   IK  I + + I+   L+DM+A CG 
Sbjct: 233 ECVSPNSVTLVLMLSACS--KLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGE 290

Query: 248 MDEARMIFH-------------------------------LMPEKNLIAWNIVISGHLQN 276
           MD AR +F                                 MPE++ ++W  +I G+L+ 
Sbjct: 291 MDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRM 350

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
               E  +LF  M    V  D+ T+ ++L + A   A+ + +       K   ++D +I 
Sbjct: 351 NRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIG 410

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N+LID Y KCG+VE A KIF E    D    T+MI   A  G GEEAL ++  M +  + 
Sbjct: 411 NALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVT 470

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           PD      ++ AC ++    +GK    ++ ++ G   +      +V++  + G + +A  
Sbjct: 471 PDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALE 530

Query: 456 AFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
               +P +   + W +++G    H   + A     ++LE  + P +  +  +LC    A 
Sbjct: 531 VIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILE--LEPENGAVYVLLCNIYAAC 588

Query: 515 LVAEAKHHFESMEKKFGIQPM 535
              +  H+   M  + GI+ +
Sbjct: 589 KKWKNLHNVRKMMMERGIKKI 609



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 36/391 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +LK  T    L  G  +    V  GF DS+ FV    + +++ CG    +R++FD     
Sbjct: 141 LLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGW 200

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEM--VLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            VV+WN + S Y      EE+   F EM      + PN  +L  M++AC+   D + G+ 
Sbjct: 201 EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKC 260

Query: 118 IHGYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG----C 172
           I+   IK G  + ++   NAL+DM+A  G ++ A  VF +++  D++SW +++ G    C
Sbjct: 261 IYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTC 320

Query: 173 VL------------HEHNDWA---------------LKLFQQMKSSEINPNMFTYTSALK 205
            +             ++  W                L LF+ M+ S + P+ FT  S L 
Sbjct: 321 RIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILT 380

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           ACA +   ELG      + K +IK+D  +G  L+DMY KCG++++A+ IF+ M +K+   
Sbjct: 381 ACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFT 440

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA-LS 324
           W  +I G   NG   EA ++F +M    V  D+ T   V+ +      +   K   + ++
Sbjct: 441 WTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMA 500

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           V+   + +      ++D  G+ GH+++A+++
Sbjct: 501 VQHGIKPNLTHYGCMVDLLGRAGHLKEALEV 531



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 99/197 (50%), Gaps = 11/197 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     L LG      +      +D F+ N+L+ MY KCGN   ++++F+ + ++ 
Sbjct: 378 ILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKD 437

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W ++     +    EEA+  F  M+ + + P+E +   ++ AC   G  L+ +  H 
Sbjct: 438 KFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVG--LVAKGKHF 495

Query: 121 YS---IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           +S   ++ G   ++     +VD+  + G+L++A+ V  ++   P+ + W +++  C +H+
Sbjct: 496 FSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHK 555

Query: 177 HNDWALKLFQQMKSSEI 193
           +   A     +M ++EI
Sbjct: 556 NVQLA-----EMAANEI 567


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/579 (39%), Positives = 337/579 (58%), Gaps = 1/579 (0%)

Query: 194 NPNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           NP+  T+  ALK+ + +      G QLH   +K+   ++P V   L+ +YA+CG +  A+
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP  + ++W  +I+ ++  G   EA  +    +  G+  D  T   VL + A   
Sbjct: 174 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 233

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   + V   + +       ++  + +D Y KCG +  A ++F +    D VA  +M+ 
Sbjct: 234 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 293

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA  G   EAL L+L MQ   + PD +  +  L+AC  L A + G+Q    +    F+ 
Sbjct: 294 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 353

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +   G +L++MYAKCGS  +A   F ++  + I+ W+AMI GL   G  K A  + GQM 
Sbjct: 354 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQME 413

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           + GV  N  T + +LC+C H GL+ + + +F +M K + I P  EHY C++D+L RAG  
Sbjct: 414 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLL 473

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           QEA +L+D MP  ANA + GALLG  +I++N E+ +H    L  +EP  S  +V+LSNIY
Sbjct: 474 QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIY 533

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           ++ G W++ AK+R  MK+  ++K P  SW+E + KV+ F VGD+SH  S +IY KLDE+ 
Sbjct: 534 SNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 593

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             +   GY P  E  + DVE+ EKE  L HHSEKLA+AF L+ T PG TIRV KNLR+C 
Sbjct: 594 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCS 653

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCHT+ + IS+I  REIIVRD NRFH FR+GSCSC  YW
Sbjct: 654 DCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 213/461 (46%), Gaps = 46/461 (9%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L  G Q+H   +     ++  V  SL+ +YA+CG    ++R+FD +P  S VSW +L + 
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y+    L EAV   +    +G+RP+ F+   ++ ACA   D   G  +   + + G    
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F A A VD+Y K G +  A  VF  +   D V+W A++ G   + H   AL LF  M++
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM----EIKSDPIVGVGLVDMYAKCG 246
             + P+ +    AL AC  +   +LGRQ     I+M    E   +P++G  L+DMYAKCG
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDEFLDNPVLGTALIDMYAKCG 369

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           S  EA ++F  M +K++I WN +I G    G +  A +L   M + GV  +  T   +L 
Sbjct: 370 STAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLL- 428

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                     C   H   ++                     +  +  K++  S  ++   
Sbjct: 429 ----------CSCTHTGLIQDGRR-----------------YFHNMTKLYHISPRIEHYG 461

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C  ++   ++ GL +EA +L   + D  +  ++ +  +LL  C      E  + V   +I
Sbjct: 462 C--IVDLLSRAGLLQEAHQL---IDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 516

Query: 427 KFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +   +    +GN   L N+Y+  G  +DA +   ++ ++G+
Sbjct: 517 R---LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGV 554



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 178/383 (46%), Gaps = 6/383 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H  S+KL   ++     +L+ +YA+ G L  A  VF ++ HP  VSW A+I   + 
Sbjct: 137 GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 196

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A+ + +   ++ + P+ FT    L ACA +     G  +  +  +  I     V
Sbjct: 197 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 256

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               VD+Y KCG M +AR +F  M +K+ +AW  ++ G+  NG   EA  LF  M  EGV
Sbjct: 257 ATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 316

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   ++  L +     A+ + +Q   +     F  +  +  +LID Y KCG   +A  
Sbjct: 317 RPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 376

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR--EINPDSFVCSSLLNACANL 412
           +F++    D++   +MI      G  + A  L  +M+    ++N ++F+   LL +C + 
Sbjct: 377 VFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFI--GLLCSCTHT 434

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              + G++   ++ K   +S        +V++ ++ G + +A +   ++P     V   A
Sbjct: 435 GLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGA 494

Query: 471 MIGGLAQHGRGKEALQMFGQMLE 493
           ++GG   H   + A  +  Q++ 
Sbjct: 495 LLGGCKIHRNAELAEHVLTQLIR 517



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 15/283 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    DL  G  V       G     FVA + V +Y KCG    +R +FD + ++ 
Sbjct: 225 VLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKD 284

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++   Y       EA+  F  M   G+RP+ ++++  ++AC   G   LGR+   
Sbjct: 285 AVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ--- 341

Query: 121 YSIKLGYDSDMFSAN-----ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            +I++  D D F  N     AL+DMYAK G+  +A  VF+ +   DI+ WNA+I G  + 
Sbjct: 342 -AIRM-VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMT 399

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            H   A  L  QM+ S +  N  T+   L +C    L + GR+   ++ K+   S  I  
Sbjct: 400 GHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 459

Query: 236 VG-LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            G +VD+ ++ G + EA  +   MP    +  N VI G L  G
Sbjct: 460 YGCIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGG 498


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/579 (39%), Positives = 337/579 (58%), Gaps = 1/579 (0%)

Query: 194 NPNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           NP+  T+  ALK+ + +      G QLH   +K+   ++P V   L+ +YA+CG +  A+
Sbjct: 67  NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP  + ++W  +I+ ++  G   EA  +    +  G+  D  T   VL + A   
Sbjct: 127 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 186

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   + V   + +       ++  + +D Y KCG +  A ++F +    D VA  +M+ 
Sbjct: 187 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 246

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA  G   EAL L+L MQ   + PD +  +  L+AC  L A + G+Q    +    F+ 
Sbjct: 247 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +   G +L++MYAKCGS  +A   F ++  + I+ W+AMI GL   G  K A  + GQM 
Sbjct: 307 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQME 366

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           + GV  N  T + +LC+C H GL+ + + +F +M K + I P  EHY C++D+L RAG  
Sbjct: 367 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLL 426

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           QEA +L+D MP  ANA + GALLG  +I++N E+ +H    L  +EP  S  +V+LSNIY
Sbjct: 427 QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIY 486

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           ++ G W++ AK+R  MK+  ++K P  SW+E + KV+ F VGD+SH  S +IY KLDE+ 
Sbjct: 487 SNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 546

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             +   GY P  E  + DVE+ EKE  L HHSEKLA+AF L+ T PG TIRV KNLR+C 
Sbjct: 547 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCS 606

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCHT+ + IS+I  REIIVRD NRFH FR+GSCSC  YW
Sbjct: 607 DCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 213/461 (46%), Gaps = 46/461 (9%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L  G Q+H   +     ++  V  SL+ +YA+CG    ++R+FD +P  S VSW +L + 
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y+    L EAV   +    +G+RP+ F+   ++ ACA   D   G  +   + + G    
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F A A VD+Y K G +  A  VF  +   D V+W A++ G   + H   AL LF  M++
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM----EIKSDPIVGVGLVDMYAKCG 246
             + P+ +    AL AC  +   +LGRQ     I+M    E   +P++G  L+DMYAKCG
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDEFLDNPVLGTALIDMYAKCG 322

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           S  EA ++F  M +K++I WN +I G    G +  A +L   M + GV  +  T   +L 
Sbjct: 323 STAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLL- 381

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                     C   H   ++                     +  +  K++  S  ++   
Sbjct: 382 ----------CSCTHTGLIQDGRR-----------------YFHNMTKLYHISPRIEHYG 414

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C  ++   ++ GL +EA +L   + D  +  ++ +  +LL  C      E  + V   +I
Sbjct: 415 C--IVDLLSRAGLLQEAHQL---IDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 469

Query: 427 KFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +   +    +GN   L N+Y+  G  +DA +   ++ ++G+
Sbjct: 470 R---LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGV 507



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 178/383 (46%), Gaps = 6/383 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H  S+KL   ++     +L+ +YA+ G L  A  VF ++ HP  VSW A+I   + 
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 149

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A+ + +   ++ + P+ FT    L ACA +     G  +  +  +  I     V
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 209

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               VD+Y KCG M +AR +F  M +K+ +AW  ++ G+  NG   EA  LF  M  EGV
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 269

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   ++  L +     A+ + +Q   +     F  +  +  +LID Y KCG   +A  
Sbjct: 270 RPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 329

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR--EINPDSFVCSSLLNACANL 412
           +F++    D++   +MI      G  + A  L  +M+    ++N ++F+   LL +C + 
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFI--GLLCSCTHT 387

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              + G++   ++ K   +S        +V++ ++ G + +A +   ++P     V   A
Sbjct: 388 GLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGA 447

Query: 471 MIGGLAQHGRGKEALQMFGQMLE 493
           ++GG   H   + A  +  Q++ 
Sbjct: 448 LLGGCKIHRNAELAEHVLTQLIR 470



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 15/283 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    DL  G  V       G     FVA + V +Y KCG    +R +FD + ++ 
Sbjct: 178 VLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKD 237

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++   Y       EA+  F  M   G+RP+ ++++  ++AC   G   LGR+   
Sbjct: 238 AVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ--- 294

Query: 121 YSIKLGYDSDMFSAN-----ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            +I++  D D F  N     AL+DMYAK G+  +A  VF+ +   DI+ WNA+I G  + 
Sbjct: 295 -AIRM-VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMT 352

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            H   A  L  QM+ S +  N  T+   L +C    L + GR+   ++ K+   S  I  
Sbjct: 353 GHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 412

Query: 236 VG-LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            G +VD+ ++ G + EA  +   MP    +  N VI G L  G
Sbjct: 413 YGCIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGG 451


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/741 (34%), Positives = 407/741 (54%), Gaps = 14/741 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY +CG+ I +RR FDA+  R+VVSW+++ + Y       +A+  F  M   G++ N  +
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
             S+++ACA  G   LG+ IH   +  G    D+   N +V+MY K G ++ A  VF+ +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
           E  + V+WN +IA C  H+    A  L  +M    + PN  T  S + ACA M+    GR
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H  +    ++SD  V   LV++Y KCG +  AR     +  ++ I+W  +++ + ++G
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
               A ++   M  EGV  D  T   +L+S  +  A+ + +++H    ++  E D  +  
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           +L+D YGKCG+ + A + F     V D+    +++ AY     G+E L ++  M  + + 
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVA 360

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM------SDTFAGNSLVNMYAKCGSI 450
           PD+    S+L+ACA+L+A   G+  H  +++ G        S      S++NMYAKCGS+
Sbjct: 361 PDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSL 420

Query: 451 DDADRAFSEIPD---RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
            DA   F++        +V+WSAM+   +Q G  +EAL+ F  M ++GV P+ ++ VS +
Sbjct: 421 ADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAI 480

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
             C+H+GLV EA   F S+    GI P + H+AC++D+L RAG  +EA  L+   P  A+
Sbjct: 481 AGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAH 540

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
            S W  LL A R Y ++E  +  A  L ++     S + LL++++  +  WD+V   R+ 
Sbjct: 541 HSTWMTLLSACRTYGDLERARRVAARLASL--RSGSAYSLLASVFCLSRKWDDVRNARQS 598

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVG-DRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
           + +     +PG SWIE+ ++VY F  G DR   R +EI+A+L+ +   + KAGY      
Sbjct: 599 LVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIK 658

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            +HD  E EK+ LL +HSEK+AV FGLI+TP G  +R+ KN+ +C DCH   + IS++  
Sbjct: 659 KVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVAD 718

Query: 747 REIIVRDVNRFHHFRNGSCSC 767
           R I +RD   FH F +GSCSC
Sbjct: 719 RVITLRDDRSFHQFSHGSCSC 739



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/422 (32%), Positives = 224/422 (53%), Gaps = 11/422 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFV-ANSLVVMYAKCGNFIDSRRLFDAIPER 59
           VL AC S   + LG  +H  +V  G   D+ +  N++V MY KCG    +R +F+ +  +
Sbjct: 64  VLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK 123

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + V+WN++ +     D  +EA     EM L G+RPN+ +L S+I+ACA       GR +H
Sbjct: 124 NTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVH 183

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
                 G +SD   ANALV++Y K G L  A    + IE  D +SW  ++A    H H  
Sbjct: 184 EIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGK 243

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ + ++M    +  + FT+ + L++C  +    LG ++H  L +  I+ DP++   LV
Sbjct: 244 RAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALV 303

Query: 240 DMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           DMY KCG+ D AR  F  M + +++  WN +++ ++      E   +F  M  +GV  D 
Sbjct: 304 DMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDA 363

Query: 299 TTLSTVLKSVASFQAIGVCKQVHA------LSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            T  ++L + AS  A+G+ +  H+      L  + A  S D +  S+I+ Y KCG + DA
Sbjct: 364 VTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADA 423

Query: 353 VKIF---KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
              F   + + A D+VA ++M+ AY+QFGL EEAL+ +  MQ   + PDS    S +  C
Sbjct: 424 KAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGC 483

Query: 410 AN 411
           ++
Sbjct: 484 SH 485


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/697 (35%), Positives = 398/697 (57%), Gaps = 19/697 (2%)

Query: 84  FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           ++ M+  G RP+ F+   ++  CA  G    GR  HG  IKLG + D+++ N+LV  YAK
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTS 202
           +G +EDA  VF  +   DIV+WN ++ G V +     AL  FQ+M  + E+  +     +
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIA 214

Query: 203 ALKACAGMELKEL-GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           AL AC  +E   + G+++H  +I+  ++ D  VG  L+DMY KCG +  AR +F  MP +
Sbjct: 215 ALAACC-LEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
            ++ WN +I G+  N    EA   F  M  EG+  +  T   +L + A  ++    + VH
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
              V+  F     +  +L++ YGK G VE + KIF + +   LV+  +MI AY    +  
Sbjct: 334 GYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT 393

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           EA+ L+LE+ ++ + PD F  S+++ A   L +    +Q+H +II  G+  +T   N+++
Sbjct: 394 EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVL 453

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MYA+ G +  +   F ++  + ++SW+ MI G A HG+GK AL+MF +M  +G+ PN  
Sbjct: 454 HMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNES 513

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T VSVL AC+ +GLV E   HF  M +++G+ P  EHY CM D+LGR G  +E ++ +++
Sbjct: 514 TFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIES 573

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP    + VWG+LL A+R   ++++ ++AAE +F +E + +  +++LS++YA AG W++V
Sbjct: 574 MPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDV 633

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA-------KLDEVSDL 674
            +VR  MK+  L++   +S +E+     +F  GD SH++S+ I+        K+ E  D 
Sbjct: 634 ERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETDDT 693

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
            N++  VP+          +    +   HS +LAV FGLI++  G+ I VKKN+RIC  C
Sbjct: 694 RNQSYPVPVA---------TRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHC 744

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + + IS+   R I+V D   +H F +GSC CG YW
Sbjct: 745 HHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 242/475 (50%), Gaps = 3/475 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K C     L  G   HG+V+  G + D +  NSLV  YAK G   D+ R+FD +P R 
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +V+WN +   YV       A+  F+EM  +  ++ +   + + + AC     S+ G++IH
Sbjct: 173 IVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           GY I+ G + D+    +L+DMY K G +  A +VF  +    +V+WN +I G  L+E  D
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A   F QM++  +   + T  + L ACA  E    GR +H  +++ +     ++   L+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MY K G ++ +  IF  +  K L++WN +I+ ++      EA +LF  +  + +  D  
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T+STV+ +     ++  C+Q+H+  +   +  +  I+N+++  Y + G V  + +IF + 
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM 472

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG- 418
            + D+++  +MI  YA  G G+ AL+++ EM+   + P+     S+L AC+     ++G 
Sbjct: 473 VSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGW 532

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
              ++ + ++G +        + ++  + G + +  +    +P D     W +++
Sbjct: 533 MHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLL 587



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 211/464 (45%), Gaps = 34/464 (7%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L AC  +     G ++HG V+  G + D  V  SL+ MY KCG    +R +F  +P R+V
Sbjct: 216 LAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTV 275

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+WN +   Y   +  +EA   F +M   G++    +  +++ ACA +  SL GR +HGY
Sbjct: 276 VTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGY 335

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            ++  +   +    AL++MY KVG +E +  +F  I +  +VSWN +IA  +  E    A
Sbjct: 336 VVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEA 395

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + LF ++ +  + P+ FT ++ + A   +      RQ+H  +I +    + ++   ++ M
Sbjct: 396 ITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHM 455

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YA+ G +  +R IF  M  K++I+WN +I G+  +G    A  +F  M   G+  +++T 
Sbjct: 456 YARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            +VL                A SV    +      N ++  YG    +E           
Sbjct: 516 VSVLT---------------ACSVSGLVDEGWMHFNLMLQEYGMIPQIE------HYGCM 554

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            DL+     +    QF            ++   I+P S V  SLL A  N +  +  +  
Sbjct: 555 TDLLGREGDLREVLQF------------IESMPIDPTSRVWGSLLTASRNQNDIDIAEYA 602

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              I +     +T     L +MYA  G  +D +R    + ++G+
Sbjct: 603 AERIFQLEH-DNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 5/286 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC   +    G  VHG VV   F     +  +L+ MY K G    S ++F  I  ++
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++ + Y++ +   EA+  F E++   + P+ F++S+++ A    G     R+IH 
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHS 435

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y I LGY  +    NA++ MYA+ G++  +  +F  +   D++SWN +I G  +H     
Sbjct: 436 YIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKT 495

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG-L 238
           AL++F +MK + + PN  T+ S L AC+   L + G  +H +L+  E    P I   G +
Sbjct: 496 ALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG-WMHFNLMLQEYGMIPQIEHYGCM 554

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAA 283
            D+  + G + E       MP +     W  +++   +N  D++ A
Sbjct: 555 TDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTAS-RNQNDIDIA 599


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/799 (31%), Positives = 425/799 (53%), Gaps = 60/799 (7%)

Query: 33   ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSG 91
            A +L+  Y   G+F  +  +F     R+ + WNS    +      L   +  FKE+   G
Sbjct: 610  AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669

Query: 92   IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
            +  +    S  +  C    D  LG +IHG  IK G+D D++   AL++ Y +   LE A 
Sbjct: 670  VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 729

Query: 152  AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
             VF ++ +P+ + WN  I   +  E     ++LF++M+ S +     T    L+AC  M 
Sbjct: 730  QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 789

Query: 212  LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN--------- 262
                 +Q+H  + +  + SD  +   L+ MY+K G ++ AR +F  M  +N         
Sbjct: 790  ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849

Query: 263  --------------------------LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
                                      ++ WN ++SGH  +G   E  ++   M  EG   
Sbjct: 850  SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKP 909

Query: 297  DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            + +++++VL++++    + + K+ H   ++  F+ D Y+  SLID Y K   +  A  +F
Sbjct: 910  NSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVF 969

Query: 357  KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD------------------ 398
                  ++ A  S+++ Y+  G+ E+AL+L  +M+   I PD                  
Sbjct: 970  DNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCAR 1029

Query: 399  -SFVCSS-----LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
             +F+ +S     LL ACA+LS  ++GK++H   I+ GF+ D F   +L++MY+K  S+ +
Sbjct: 1030 KAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKN 1089

Query: 453  ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
            A + F  I ++ + SW+ MI G A  G GKEA+ +F +M + GV P+ IT  ++L AC +
Sbjct: 1090 AHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149

Query: 513  AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
            +GL+ E   +F+SM   + I P  EHY CM+D+LGRAG   EA +L+ TMP + +A++WG
Sbjct: 1150 SGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 1209

Query: 573  ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
            ALLG+ RI+KN+   + AA+ LF +EP  S+ ++L+ N+Y+    W+++  +R  M    
Sbjct: 1210 ALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAG 1269

Query: 633  LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
            ++     SWI++  +V+ F+  ++ H  + +IY +L ++   + K GYVP V     +++
Sbjct: 1270 VRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMD 1329

Query: 693  ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
            E EK+++L  H+EKLA+ +GLI    G  IRV KN RIC DCH++ ++IS + +RE+ +R
Sbjct: 1330 EVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLR 1389

Query: 753  DVNRFHHFRNGSCSCGGYW 771
            D  RFHHFR G CSC  +W
Sbjct: 1390 DGVRFHHFREGKCSCNDFW 1408



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 254/538 (47%), Gaps = 61/538 (11%)

Query: 2    LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            LK CT   D++LG+++HG ++  GFD D ++  +L+  Y +C     + ++F  +P    
Sbjct: 681  LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEA 740

Query: 62   VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            + WN      +  + L++ V  F++M  S ++    ++  ++ AC   G     ++IHGY
Sbjct: 741  LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGY 800

Query: 122  SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH---------------------- 159
              + G DSD+   N L+ MY+K G LE A  VF  +E+                      
Sbjct: 801  VFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDA 860

Query: 160  -------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
                         PDIV+WN +++G  LH + +  L + Q+M+     PN  + TS L+A
Sbjct: 861  WSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQA 920

Query: 207  CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
             + +    +G++ H  +++     D  VG  L+DMY K  S+  A+ +F  M  +N+ AW
Sbjct: 921  ISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAW 980

Query: 267  NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT------------------------LS 302
            N ++SG+   G   +A  L   M +EG+  D  T                        ++
Sbjct: 981  NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASIT 1040

Query: 303  TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
             +L++ AS   +   K++H LS++  F  D ++  +LID Y K   +++A K+F+     
Sbjct: 1041 CLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 1100

Query: 363  DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQV 421
             L +   MI  +A FGLG+EA+ ++ EMQ   + PD+   ++LL+AC N     +G K  
Sbjct: 1101 TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYF 1160

Query: 422  HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
               I  +  +        +V++  + G +D+A      +P +   + W A++G    H
Sbjct: 1161 DSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 196/417 (47%), Gaps = 70/417 (16%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL+AC     L    Q+HG V   G DSD  + N L+ MY+K G    +RR+FD++  R+
Sbjct: 781  VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 840

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFF---------------------------KEMVLS--- 90
              SWNS+ S Y    FL +A   F                           KE VL+   
Sbjct: 841  TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 900

Query: 91   -----GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
                 G +PN  S++S++ A +  G   +G++ HGY ++ G+D D++   +L+DMY K  
Sbjct: 901  RMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 960

Query: 146  NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY----- 200
            +L  A AVF ++++ +I +WN++++G       + AL+L  QM+   I P++ T+     
Sbjct: 961  SLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 1020

Query: 201  -------------------TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
                               T  L+ACA + L + G+++HC  I+     D  V   L+DM
Sbjct: 1021 GYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDM 1080

Query: 242  YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
            Y+K  S+  A  +F  +  K L +WN +I G    G   EA S+F  M + GVG D  T 
Sbjct: 1081 YSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 1140

Query: 302  STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL------IDAYGKCGHVEDA 352
            + +L +  +   IG            +  +D  IV  L      +D  G+ G++++A
Sbjct: 1141 TALLSACKNSGLIG-----EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEA 1192



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 185/410 (45%), Gaps = 44/410 (10%)

Query: 133  SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI-----AGCVLHEHNDWALKLFQQ 187
            +A  L+  Y   G+   A  VF      + + WN+ +     +   LH      L++F++
Sbjct: 609  AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLH----IVLEVFKE 664

Query: 188  MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
            +    +  +   Y+ ALK C  +    LG ++H  LIK     D  +   L++ Y +C  
Sbjct: 665  LHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG 724

Query: 248  MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
            +++A  +FH MP    + WN  I  +LQ+    +   LF  M    +  +  T+  VL++
Sbjct: 725  LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 784

Query: 308  VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
                 A+   KQ+H    +   +SD  + N LI  Y K G +E A ++F      +  + 
Sbjct: 785  CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 844

Query: 368  TSMITAYAQFGLGEEALKLYLEMQDREINPD----------------------------- 398
             SMI++YA  G   +A  L+ E++  ++ PD                             
Sbjct: 845  NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 904

Query: 399  ------SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
                  S   +S+L A + L     GK+ H ++++ GF  D + G SL++MY K  S+  
Sbjct: 905  EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXS 964

Query: 453  ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
            A   F  + +R I +W++++ G +  G  ++AL++  QM ++G+ P+ +T
Sbjct: 965  AQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 27/287 (9%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL+A +    L +G + HG V+  GFD D +V  SL+ MY K  +   ++ +FD +  R+
Sbjct: 917  VLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRN 976

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP------------------------NE 96
            + +WNSL S Y      E+A+    +M   GI+P                        N 
Sbjct: 977  IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNS 1036

Query: 97   FSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD 156
             S++ ++ ACA       G++IH  SI+ G+  D+F A AL+DMY+K  +L++A  VF+ 
Sbjct: 1037 ASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRR 1096

Query: 157  IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
            I++  + SWN +I G  +      A+ +F +M+   + P+  T+T+ L AC    L   G
Sbjct: 1097 IQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 1156

Query: 217  RQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMPEK 261
             +   S+I  + +  P +     +VD+  + G +DEA  + H MP K
Sbjct: 1157 WKYFDSMI-TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 1202



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 151/330 (45%), Gaps = 3/330 (0%)

Query: 223 LIKMEIKSDPIVGV-GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
           +IK+  K +P      L+  Y   G    A M+F++   +N + WN  +     + G + 
Sbjct: 597 MIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLH 656

Query: 282 AA-SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
               +F  ++ +GV FD    S  LK+      I +  ++H   +K  F+ D Y+  +L+
Sbjct: 657 IVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALM 716

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + YG+C  +E A ++F E    + +     I    Q    ++ ++L+ +MQ   +  ++ 
Sbjct: 717 NFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETA 776

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
               +L AC  + A    KQ+H ++ +FG  SD    N L++MY+K G ++ A R F  +
Sbjct: 777 TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 836

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            +R   SW++MI   A  G   +A  +F ++    + P+ +T   +L      G   E  
Sbjct: 837 ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVL 896

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           +  + M+ + G +P       ++  +   G
Sbjct: 897 NILQRMQGE-GFKPNSSSMTSVLQAISELG 925



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 12/184 (6%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L+AC S   L  G ++H + +  GF  D FVA +L+ MY+K  +  ++ ++F  I  ++
Sbjct: 1042 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 1101

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + SWN +   +      +EA+  F EM   G+ P+  + +++++AC  SG  L+G    G
Sbjct: 1102 LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG--LIG---EG 1156

Query: 121  YSIKLGYDSDMFSANAL------VDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCV 173
            +       +D      L      VD+  + G L++A  +   +   PD   W A++  C 
Sbjct: 1157 WKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCR 1216

Query: 174  LHEH 177
            +H++
Sbjct: 1217 IHKN 1220


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/567 (39%), Positives = 353/567 (62%), Gaps = 1/567 (0%)

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
              + S E+ P    Y + + ACA  +  +  R++H  L       D  +   L+ +Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CGS+ EA  +F  M  K++++W  +I+G+ QN    EA  L P M +     +  T +++
Sbjct: 99  CGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           LK+V ++   G+  Q+HAL+VK  +  D Y+ ++L+D Y +CG ++ A  +F +  + + 
Sbjct: 159 LKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V+  ++I+ +A+ G GE AL ++ EMQ        F  SS+ +A A + A EQGK VH H
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAH 278

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           +IK       F GN++++MYAK GS+ DA + F  + ++ +V+W++M+   AQ+G GKEA
Sbjct: 279 MIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +  F +M + G+  N I+ + +L AC+H GLV E KH+F+ M K++ ++P  EHY  ++D
Sbjct: 339 VSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVD 397

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGRAG    A+  +  MP +  A+VWGALL A R++KN +VGQ AA+ +F ++P+ S  
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGP 457

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
            VLL NIYAS G WD  A+VR+ MK   +KKEP  SW+E+++ V+ F   D +H R++EI
Sbjct: 458 PVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEI 517

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           Y   DE+S  + K GYVP ++  L  V+E E+E  L +HSEK+A+AF LI  P GATIR+
Sbjct: 518 YKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRI 577

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIV 751
            KN+RIC DCH++F++ISK+  REI++
Sbjct: 578 MKNIRICGDCHSAFKYISKVFEREIVI 604



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 255/550 (46%), Gaps = 54/550 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           + AC   K+L    ++H  +  + F  D F+ NSL+ +Y KCG+ +++ ++FD +  + +
Sbjct: 58  ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW SL + Y   D   EA+     M+    +PN F+ +S++ A     DS +G +IH  
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHAL 177

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           ++K  +  D++  +AL+DMYA+ G ++ A AVF  ++  + VSWNA+I+G       + A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L +F +M+ +      FTY+S   A AG+   E G+ +H  +IK   K    VG  ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDM 297

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAK GSM +AR +F  +  K+L+ WN +++   Q G   EA S F  M + G+  +Q + 
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISF 357

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             +L + +           H   VK   E   Y    +I  Y     +E  V +      
Sbjct: 358 LCILTACS-----------HGGLVK---EGKHYF--DMIKEYNLEPEIEHYVTV------ 395

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
           VDL+          + GL   AL    +M    + P + V  +LL AC      + G+  
Sbjct: 396 VDLL---------GRAGLLNYALVFIFKM---PMEPTAAVWGALLAACRMHKNAKVGQFA 443

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM----- 471
             H+ +     D+     L N+YA  G  D A R    +   G+      SW  +     
Sbjct: 444 ADHVFQLD-PDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVH 502

Query: 472 --IGGLAQHGRGKEALQMFGQ----MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
             +     H R +E  +M+ +    + ++G +P+   +  VL   +     A  ++H E 
Sbjct: 503 MFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD---MDYVLLHVDEQEREANLQYHSEK 559

Query: 526 MEKKFGIQPM 535
           +   F +  M
Sbjct: 560 IALAFALIQM 569



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 203/409 (49%), Gaps = 10/409 (2%)

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           + P      + I ACA S +    RKIH +     +  D F  N+L+ +Y K G++ +A 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  + + D+VSW ++IAG   ++    A+ L   M      PN FT+ S LKA     
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
              +G Q+H   +K +   D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +IS
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  + G    A  +F  M R G      T S++  ++A   A+   K VHA  +K+  + 
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKL 286

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             ++ N+++D Y K G + DA K+F+     DLV   SM+TA+AQ+GLG+EA+  + EM+
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346

Query: 392 DREI--NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
              I  N  SF+C  +L AC++    ++GK     I ++    +     ++V++  + G 
Sbjct: 347 KSGIYLNQISFLC--ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGL 404

Query: 450 IDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           ++ A     ++P     + W A++     H   K      GQ   D V 
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK-----VGQFAADHVF 448



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 1/273 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +  D  +G Q+H + V   +  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 158 LLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L S +      E A+  F EM  +G     F+ SS+ +A AG G    G+ +H 
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHA 277

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK       F  N ++DMYAK G++ DA  VF+ + + D+V+WN+++     +     
Sbjct: 278 HMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+ S I  N  ++   L AC+   L + G+     + +  ++ +    V +VD
Sbjct: 338 AVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVD 397

Query: 241 MYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +  + G ++ A +    MP E     W  +++ 
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/636 (38%), Positives = 372/636 (58%), Gaps = 11/636 (1%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++  Y +   L DA+ +F ++   D+VSWN++I+GCV     + A+KLF +M    +   
Sbjct: 72  MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             ++T+ +  C      +   +L     +M +K D      +V  Y + G +D+A  +F 
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERL---FYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFK 183

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP KN+I+W  +I G  QN    EA  LF  M R  +       + V+ + A+  A  +
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHM 243

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
             QVH L +K  F  ++Y+  SLI  Y  C  + D+ K+F E     +   T++++ Y+ 
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
               E+AL ++  M    I P+    +S LN+C+ L   + GK++H   +K G  +D F 
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
           GNSLV MY+  G+++DA   F +I  + IVSW+++I G AQHGRGK A  +FGQM+    
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG-IQPMQEHYACMIDILGRAGKFQEA 555
            P+ IT   +L AC+H G + + +  F  M      I    +HY CM+DILGR GK +EA
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEA 483

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
            EL++ M  + N  VW ALL A R++ +V+ G+ AA  +F ++ + S+ +VLLSNIYASA
Sbjct: 484 EELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASA 543

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G W NV+K+R  MK N + K+PG SW+ ++ K + F  GD+ H     IY KL+ + + L
Sbjct: 544 GRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC--SRIYEKLEFLREKL 601

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            + GY P   + LHDVE+ +KE++L++HSE+LA+AFGLI T  G+ + V KNLR+C DCH
Sbjct: 602 KELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCH 661

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T  + IS +V REI++RD  RFHHF+NG+CSCG YW
Sbjct: 662 TVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 231/475 (48%), Gaps = 40/475 (8%)

Query: 36  LVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN 95
           ++  Y +    +D+  LFD +P R VVSWNS+ S  V C  +  AV  F EM    +   
Sbjct: 72  MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128

Query: 96  EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
             S ++M+N C  SG      ++  Y + +    D  + N++V  Y + G ++DA+ +FK
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLF-YQMPV---KDTAAWNSMVHGYLQFGKVDDALKLFK 183

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
            +   +++SW  +I G   +E +  AL LF+ M    I      +T  + ACA      +
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHM 243

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G Q+H  +IK+    +  V   L+  YA C  + ++R +F     + +  W  ++SG+  
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N    +A S+F  M R  +  +Q+T ++ L S ++   +   K++H ++VK   E+D ++
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            NSL+  Y   G+V DAV +F +     +V+  S+I   AQ G G+ A  ++ +M     
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            PD    + LL+AC++    E+G+++      F +MS      S +N             
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKL------FYYMS------SGINHI----------- 460

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
                 DR I  ++ M+  L + G+ KEA ++  +M+   V PN +  +++L AC
Sbjct: 461 ------DRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSAC 506



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 157/293 (53%), Gaps = 7/293 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC +     +G+QVHG+++  GF  +E+V+ SL+  YA C    DSR++FD      
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V  W +L S Y      E+A+  F  M+ + I PN+ + +S +N+C+  G    G+++HG
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++KLG ++D F  N+LV MY+  GN+ DAV+VF  I    IVSWN++I GC  H    W
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           A  +F QM      P+  T+T  L AC+     E GR+L   +       D  +     +
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCM 470

Query: 239 VDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISGHLQNG----GDMEAASLF 286
           VD+  +CG + EA  +I  ++ + N + W  ++S    +     G+  AA++F
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 212/457 (46%), Gaps = 52/457 (11%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D    NS+V  Y + G   D+ +LF  +P ++V+SW ++       +   EA+  FK M+
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              I+      + +I ACA +    +G ++HG  IKLG+  + + + +L+  YA    + 
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           D+  VF +  H  +  W A+++G  L++ ++ AL +F  M  + I PN  T+ S L +C+
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   + G+++H   +K+ +++D  VG  LV MY+  G++++A  +F  + +K++++WN 
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G  Q+G    A  +F  M                                   ++  
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQM-----------------------------------IRLN 422

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLV-----ACTSMITAYAQFGLGEE 382
            E D+     L+ A   CG +E   K+F   SS ++ +       T M+    + G  +E
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV- 441
           A +L   M    + P+  V  +LL+AC   S  ++G++    I  F   S + A   L+ 
Sbjct: 483 AEELIERMV---VKPNEMVWLALLSACRMHSDVDRGEKAAAAI--FNLDSKSSAAYVLLS 537

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIV-----SWSAMIG 473
           N+YA  G   +  +   ++   GI+     SW  + G
Sbjct: 538 NIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRG 574



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 25/297 (8%)

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQTT------ 300
           +DEAR +F+ +P  ++  +  +I+G+ ++   ++A +LF  M  R+ V ++         
Sbjct: 51  IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110

Query: 301 --LSTVLK--------SVASFQAI-------GVCKQVHALSVKTAFESDDYIVNSLIDAY 343
             ++T +K        SV S+ A+       G   Q   L  +   + D    NS++  Y
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHGY 169

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
            + G V+DA+K+FK+    ++++ T+MI    Q     EAL L+  M    I   S   +
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
            ++ ACAN  A+  G QVH  IIK GF+ + +   SL+  YA C  I D+ + F E    
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            +  W+A++ G + + + ++AL +F  ML + +LPN  T  S L +C+  G +   K
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 16/254 (6%)

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           +   +I  Y +   + DA+ +F E    D+V+  SMI+   + G    A+KL+ EM +R 
Sbjct: 68  LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
           +       ++++N C      +Q +++   +     + DT A NS+V+ Y + G +DDA 
Sbjct: 128 V----VSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDDAL 179

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
           + F ++P + ++SW+ MI GL Q+ R  EAL +F  ML   +         V+ AC +  
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN-- 237

Query: 515 LVAEAKH---HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
             A A H       +  K G    +   A +I       +  ++ ++ D        +VW
Sbjct: 238 --APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVW 294

Query: 572 GALLGAARIYKNVE 585
            ALL    + K  E
Sbjct: 295 TALLSGYSLNKKHE 308



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ID+A   F+++P   +  ++ MI G  +  R  +AL +F +M    V    ++  S++  
Sbjct: 51  IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMISG 106

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C   G +  A   F+ M ++  +      +  M++   R+GK  +A  L   MP +  A+
Sbjct: 107 CVECGDMNTAVKLFDEMPERSVVS-----WTAMVNGCFRSGKVDQAERLFYQMPVKDTAA 161

Query: 570 VWGALL 575
            W +++
Sbjct: 162 -WNSMV 166


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/584 (42%), Positives = 344/584 (58%), Gaps = 28/584 (4%)

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+ S + PN +T+++ L AC        G Q+H  + K    ++  V   LVDMYAKC  
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           M  A  +F  MP   L+  N+                            D+ + S+V  +
Sbjct: 61  MLMAEKVFEEMP--TLLLENLT-------------------------ALDEVSFSSVFSA 93

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            A+   +   KQVH +++K    +  YI NSL D YGKCG   D  K+F  + A D+V  
Sbjct: 94  CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
             MI AY      E+A   +  M+ +   PD    SS+L++CANL+A  QG  +H  II+
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            GF+ +    +SL+ MYAKCGS+ DA + F E  DR +V W+A+I    QHG     +++
Sbjct: 214 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 273

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F QML +G+ P++IT VSVL AC+H G V E   +F SM K  GI P  EHYAC++D+L 
Sbjct: 274 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 333

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           RAG+   A   ++ MP + +ASVWGALL A R + N+ +G+  A  LF +EP+    +VL
Sbjct: 334 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 393

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           L NI    GM +   +VRR M+   ++KEPG SWI++K+  Y FTV D+SH ++KEIY  
Sbjct: 394 LCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEM 453

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L+++ +L+ K GYV   E  ++  EE  KEQ L++HSEK+A+AFGL++ P GA IR+KKN
Sbjct: 454 LEKLKELVKKKGYVAETEFAINTAEEY-KEQSLWYHSEKIALAFGLLSLPAGAPIRIKKN 512

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR C DCHT  +F S+I +REIIVRD+NRFHHF NG CSCG YW
Sbjct: 513 LRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 221/451 (49%), Gaps = 46/451 (10%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M  SG+ PN ++ S++++AC  +  S+ G ++H    K G+ +++F  +ALVDMYAK  +
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +  A  VF+  E P ++  N               L    ++          +++S   A
Sbjct: 61  MLMAEKVFE--EMPTLLLEN---------------LTALDEV----------SFSSVFSA 93

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA     E G+Q+H   +K+ + +   +   L DMY KCG  ++   +F     ++++ W
Sbjct: 94  CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           NI+I  ++ N    +A + F  M R+G   D+ + S+VL S A+  A+     +H   ++
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           + F  +  + +SLI  Y KCG + DA +IF+E+   ++V  T++I A  Q G     ++L
Sbjct: 214 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 273

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQG-----KQVHVHIIKFGFMSDTFAGNSLV 441
           + +M    I PD     S+L+AC++    E+G       + VH I  G   + +A   +V
Sbjct: 274 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPG--HEHYA--CIV 329

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GKE-ALQMFGQMLEDGV 496
           ++ ++ G +D A R    +P +   S W A++     H     GKE AL++F   LE   
Sbjct: 330 DLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD--LEPDN 387

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESME 527
             N++ L ++L      G++ EA      ME
Sbjct: 388 PGNYVLLCNIL---TRNGMLNEADEVRRKME 415



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 215/468 (45%), Gaps = 67/468 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT       G Q+H +V   GF ++ FV ++LV MYAKC + + + ++F+ +P   
Sbjct: 16  VLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPTLL 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + +  +L                           +E S SS+ +ACA +G+   G+++HG
Sbjct: 76  LENLTAL---------------------------DEVSFSSVFSACANAGNLEFGKQVHG 108

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++KLG  + ++  N+L DMY K G   D   +F +    D+V+WN +I   V + + + 
Sbjct: 109 VALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYED 168

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A   F  M+     P+  +Y+S L +CA +     G  +H  +I+     +  V   L+ 
Sbjct: 169 ACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 228

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +A  IF    ++N++ W  +I+   Q+G       LF  M REG+  D  T
Sbjct: 229 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYIT 288

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG-KCGHVEDAVKIFKES 359
             +VL + +           H   V+  F    +  NS+I  +G   GH   A  +   S
Sbjct: 289 FVSVLSACS-----------HTGRVEEGF----FYFNSMIKVHGIYPGHEHYACIVDLLS 333

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
            A +L                 +  K ++E+    I PD+ V  +LL+AC N S    GK
Sbjct: 334 RAGEL-----------------DRAKRFIELM--PIKPDASVWGALLSACRNHSNLIMGK 374

Query: 420 QVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           +V + +  F    D   GN   L N+  + G +++AD    ++   G+
Sbjct: 375 EVALKL--FDLEPDN-PGNYVLLCNILTRNGMLNEADEVRRKMESIGV 419


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/715 (35%), Positives = 420/715 (58%), Gaps = 4/715 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   +D+  G ++H ++V  G+ S  F+ N+LV MYAK  +   +RRLFD   E+ 
Sbjct: 151 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 210

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V WNS+ S Y       E +  F+EM ++G  PN +++ S + AC G   + LG++IH
Sbjct: 211 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 270

Query: 120 GYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
              +K   + S+++  NAL+ MY + G +  A  + + + + D+V+WN++I G V +   
Sbjct: 271 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 330

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL+ F  M ++    +  + TS + A   +     G +LH  +IK    S+  VG  L
Sbjct: 331 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 390

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMY+KC         F  M +K+LI+W  VI+G+ QN   +EA  LF  + ++ +  D+
Sbjct: 391 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 450

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             L ++L++ +  +++ + K++H   ++     D  I N L+D YGKC ++  A ++F+ 
Sbjct: 451 MILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFES 509

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ TSMI++ A  G   EA++L+  M +  ++ DS     +L+A A+LSA  +G
Sbjct: 510 IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 569

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H ++++ GF  +     ++V+MYA CG +  A   F  I  +G++ +++MI     H
Sbjct: 570 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 629

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G GK A+++F +M  + V P+HI+ +++L AC+HAGL+ E +   + ME ++ ++P  EH
Sbjct: 630 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 689

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           Y C++D+LGRA    EA E V  M  +  A VW ALL A R +   E+G+ AA+ L  +E
Sbjct: 690 YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELE 749

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P+     VL+SN++A  G W++V KVR  MK + ++K PG SWIE+  KV+ FT  D+SH
Sbjct: 750 PKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 809

Query: 659 ARSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
             SKEIY KL EV+  L +  GYV   +  LH+V+E EK Q+L+ HSE++A+A+G
Sbjct: 810 PESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 271/555 (48%), Gaps = 47/555 (8%)

Query: 47  IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC 106
           +   ++FD +P+R+  +WN++   YV       A+  +  M + G+     S  +++ AC
Sbjct: 96  VSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 155

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSW 165
           A   D   G ++H   +KLGY S  F  NALV MYAK  +L  A  +F    E  D V W
Sbjct: 156 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 215

Query: 166 NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           N++++       +   L+LF++M  +   PN +T  SAL AC G    +LG+++H S++K
Sbjct: 216 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 275

Query: 226 MEIKSDPI-VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
               S  + V   L+ MY +CG M +A  I   M   +++ WN +I G++QN    EA  
Sbjct: 276 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 335

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            F  M   G   D+ ++++++ +      +    ++HA  +K  ++S+  + N+LID Y 
Sbjct: 336 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYS 395

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
           KC       + F      DL++ T++I  YAQ     EAL+L+ ++  + +  D  +  S
Sbjct: 396 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 455

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           +L A + L +    K++H HI++ G + DT   N LV++Y KC ++  A R F  I  + 
Sbjct: 456 ILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKD 514

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV------------------ 506
           +VSW++MI   A +G   EA+++F +M+E G+  + + L+ +                  
Sbjct: 515 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 574

Query: 507 -------------------LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
                              + AC   G +  AK  F+ +E+K  +Q     Y  MI+  G
Sbjct: 575 YLLRKGFCLEGSIAVAVVDMYAC--CGDLQSAKAVFDRIERKGLLQ-----YTSMINAYG 627

Query: 548 RAGKFQEAMELVDTM 562
             G  + A+EL D M
Sbjct: 628 MHGCGKAAVELFDKM 642


>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/528 (43%), Positives = 343/528 (64%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G   H  +I++ +++D I    L++MY+KCG ++ AR +F  MP ++L++WN ++  H Q
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG   +A  LF  M +EG+   + T+S+V+ + A+   +  CKQ+H  ++KTA +S+ ++
Sbjct: 126 NGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
             +L+D Y KCG V+DA  +F+       V  +SM+  Y Q  L EEAL L+   Q   +
Sbjct: 186 GTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             + F  SS L+ACA  +A  +GKQV   + K G  S+ F  +SL++MYAKCG I++A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYI 305

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            FS + ++ +V W+AM+ G ++H R  EA+  F +M + G+ PN IT +SVL AC+H GL
Sbjct: 306 VFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGL 365

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V + + +F+ M +   + P   HY+CM+DILGRAG   EA +L+D MPF A AS+WG+LL
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLL 425

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
            + RIY+N+E  + AA+ LF IEP  +  HVLLSNIYA+   W+ VA+ R  +K++K KK
Sbjct: 426 ASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKK 485

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G SWIE+K KV++F VG+R+H R  EIY KL+++   + K GY    E DLHDVEES 
Sbjct: 486 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
           K++LL HHSEKLA+ FG++  P GA IR+ KNLRIC DCH+  +  S+
Sbjct: 546 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASR 593



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 199/353 (56%), Gaps = 1/353 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L++    +    G+  H  ++  G  +D   +N L+ MY+KCG    +R+LFD +P RS
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN++   +      E+A+  F +M   GI  +EF++SS++ ACA        +++HG
Sbjct: 113 LVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHG 172

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K   DS++F   AL+D+YAK G ++DA  VF+ +     V+W++++AG V +E  + 
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEE 232

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF + ++  +  N FT +SAL ACA       G+Q+   L K  I S+  V   L+D
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLID 292

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++EA ++F  + EKN++ WN ++SG  ++   +EA   F  M + G+  ++ T
Sbjct: 293 MYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEIT 352

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-LIDAYGKCGHVEDA 352
             +VL + +    +   ++   L ++    S + +  S ++D  G+ G + +A
Sbjct: 353 YISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 405



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 238/452 (52%), Gaps = 8/452 (1%)

Query: 85  KEMVLSGIRPNEFS-LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
           KE+V  GIR    S L  ++ + A +  ++ G   H   I++G  +D  ++N L++MY+K
Sbjct: 35  KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 94

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G +E A  +F ++    +VSWN ++     +  ++ AL LF QM+   I+ + FT +S 
Sbjct: 95  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSV 154

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           + ACA        +QLH   +K  + S+  VG  L+D+YAKCG + +A ++F  MPE++ 
Sbjct: 155 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSD 214

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           + W+ +++G++QN    EA  LF      G+  +Q T+S+ L + A+  A+   KQV A+
Sbjct: 215 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 274

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
             KT   S+ ++++SLID Y KCG +E+A  +F      ++V   +M++ +++     EA
Sbjct: 275 LCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEA 334

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVN 442
           +  + +MQ   I P+     S+L AC++L   E+G++    +I+   +S +    + +V+
Sbjct: 335 MIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVD 394

Query: 443 MYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQML---EDGVLP 498
           +  + G + +A      +P D     W +++     + R  E  ++  + L   E     
Sbjct: 395 ILGRAGLLHEAKDLIDRMPFDATASMWGSLLASCRIY-RNLEXAEVAAKHLFEIEPHNAG 453

Query: 499 NHITLVSVLCACNHAGLVAEAKHHF-ESMEKK 529
           NH+ L ++  A N    VA A++   ES  KK
Sbjct: 454 NHVLLSNIYAANNRWEEVARARNLLKESKAKK 485



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 151/288 (52%), Gaps = 3/288 (1%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           + L  +L+S A  +A       HA  ++    +D    N L++ Y KCG VE A K+F E
Sbjct: 48  SELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDE 107

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                LV+  +M+ ++ Q G  E+AL L+++MQ   I+   F  SS++ ACA      + 
Sbjct: 108 MPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFEC 167

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           KQ+H   +K    S+ F G +L+++YAKCG + DA   F  +P+R  V+WS+M+ G  Q+
Sbjct: 168 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQN 227

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
              +EAL +F +    G+  N  T+ S L AC     + E K   +++  K GI      
Sbjct: 228 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK-QVQAVLCKTGIGSNIFV 286

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVE 585
            + +ID+  + G  +EA  +  ++  + N  +W A+L G +R  +++E
Sbjct: 287 ISSLIDMYAKCGIIEEAYIVFSSVE-EKNVVLWNAMLSGFSRHVRSLE 333


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/555 (40%), Positives = 338/555 (60%)

Query: 217  RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
            RQ+H       +  + IV   LV  Y+   ++D+A  +F  M  ++ ++W++++ G  + 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 277  GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
            G  M     F  + R G   D  TL  V+++    + + + + +H +  K   + D ++ 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 337  NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
             +L+D YGKC  +EDA  +F +    DLV  T MI  YA+ G   E+L L+ +M++  + 
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 397  PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            PD     +++ ACA L A  + + +  +I +  F  D   G ++++M+AKCG ++ A   
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 457  FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
            F  + ++ ++SWSAMI     HG+G++AL +F  ML  G+LPN ITLVS+L AC+HAGLV
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054

Query: 517  AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
             E    F  M + + ++   +HY C++D+LGRAG+  EA++L+ +M  + +  +WGA LG
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114

Query: 577  AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
            A R +K+V + + AA  L  ++P+    ++LLSNIYA+AG W++VAK+R  M   +LKK 
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKI 1174

Query: 637  PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
            PG +WIEV +K + F+VGD +H RSKEIY  L  + + L   GYVP     LHDV+E  K
Sbjct: 1175 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 1234

Query: 697  EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
              +LY HSEKLA+AFGLIATP    IR+ KNLR+C DCHT  + +S I  R IIVRD NR
Sbjct: 1235 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 1294

Query: 757  FHHFRNGSCSCGGYW 771
            FHHF+ G+CSCG YW
Sbjct: 1295 FHHFKEGACSCGDYW 1309



 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/539 (37%), Positives = 315/539 (58%), Gaps = 5/539 (0%)

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             +NP    Y SAL  C  +      RQ+H       +  + +V   L+  Y+   ++D+
Sbjct: 58  QRLNPKF--YISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDD 112

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F  M  ++ ++W++++ G  + G  +     F  + R G   D  TL  V+++   
Sbjct: 113 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD 172

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
            + + + + +H +  K   + D ++  +L+D Y KC  +EDA  +F +    DLV  T M
Sbjct: 173 LKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVM 232

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  YA+ G   E+L L+ +M++  + PD     +++ ACA L A  + + +  +I +  F
Sbjct: 233 IGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKF 292

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             D   G ++++MYAKCG ++ A   F  + ++ ++SWSAMI     HG+G++AL +F  
Sbjct: 293 QLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPM 352

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           ML  G+LP+ ITL S+L AC+HAGLV E    F SM + + ++   +HY C++D+LGRAG
Sbjct: 353 MLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAG 412

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           +  EA++L+ +M  + +  +WGA LGA R +K+V + + AA  L  ++ +    +VLLSN
Sbjct: 413 RLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSN 472

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
           IYA+AG W++VAK+R  M   +LKK PG +WIEV +K + F+VGD +H RSKEIY  L  
Sbjct: 473 IYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKS 532

Query: 671 VSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
           +S+ L   GYVP     LHDV+E  K  +LY HSEKLA+AFGLIATP    IR+ KNLR
Sbjct: 533 LSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 203/422 (48%), Gaps = 41/422 (9%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC- 74
           QVH      G   +  VAN L+  Y+      D+  LFD +  R  VSW+ +   +    
Sbjct: 80  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139

Query: 75  DFLEEAVCF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
           D++    CF  F+E++  G RP+ ++L  +I AC    +  +GR IH    K G D D F
Sbjct: 140 DYIN---CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 196

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
              ALVDMY K   +EDA  +F  ++  D+V+W  +I G       + +L LF++M+   
Sbjct: 197 VCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 256

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + P+     + + ACA +      R +   + + + + D I+G  ++DMYAKCG ++ AR
Sbjct: 257 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 316

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  M EKN+I+W+ +I+ +  +G   +A  LFP M   G+  D+ TL+++L +     
Sbjct: 317 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYA----- 371

Query: 313 AIGVCKQVHALSVKTAFES---DDYIVNS-------LIDAYGKCGHVEDAVKIFKESS-- 360
               C     +     F S   +DY V +       ++D  G+ G +++A+K+ K  +  
Sbjct: 372 ----CSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIE 427

Query: 361 ------AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                    L AC +    +    L E+A    LE+Q +  NP  +V  S  N  AN   
Sbjct: 428 KDEGLWGAFLGACRT----HKDVVLAEKAATSLLELQSQ--NPGHYVLLS--NIYANAGR 479

Query: 415 YE 416
           +E
Sbjct: 480 WE 481



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 41/422 (9%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC- 74
            QVH      G   +  VAN LV  Y+      D+  LFD +  R  VSW+ +   +    
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 75   DFLEEAVCF--FKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
            D++    CF  F+E++  G RP+ ++L  +I AC    +  +GR IH    K G D D F
Sbjct: 816  DYMN---CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 872

Query: 133  SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
               ALVDMY K   +EDA  +F  +   D+V+W  +I G     + + +L LF +M+   
Sbjct: 873  VCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 932

Query: 193  INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
            + P+     + + ACA +      R +   + + + + D I+G  ++DM+AKCG ++ AR
Sbjct: 933  VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 992

Query: 253  MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
             IF  M EKN+I+W+ +I+ +  +G   +A  LFP M R G+  ++ TL ++L +     
Sbjct: 993  EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA----- 1047

Query: 313  AIGVCKQVHALSVKTAFES---DDYIVNS-------LIDAYGKCGHVEDAVKIFKESS-- 360
                C     +     F S   +DY V         ++D  G+ G +++A+K+    +  
Sbjct: 1048 ----CSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXE 1103

Query: 361  ------AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                     L AC +    +    L E+A    LE+Q +  NP  ++  S  N  AN   
Sbjct: 1104 KDEGLWGAFLGACRT----HKDVXLAEKAATSLLELQPQ--NPGHYILLS--NIYANAGR 1155

Query: 415  YE 416
            +E
Sbjct: 1156 WE 1157



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 189/395 (47%), Gaps = 7/395 (1%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           R++H  +   G   ++  AN L+  Y+    L+DA  +F  +   D VSW+ ++ G    
Sbjct: 79  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                    F+++      P+ +T    ++AC  ++  ++GR +H  + K  +  D  V 
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 198

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LVDMY KC  +++AR +F  M E++L+ W ++I G+ + G   E+  LF  M  EGV 
Sbjct: 199 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 258

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D+  + TV+ + A   A+   + +     +  F+ D  +  ++ID Y KCG VE A +I
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      ++++ ++MI AY   G G +AL L+  M    + PD    +SLL AC++    
Sbjct: 319 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLV 378

Query: 416 EQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP---DRGIVSWSAM 471
           E+G +    + + +   +D      +V++  + G +D+A +    +    D G+  W A 
Sbjct: 379 EEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGL--WGAF 436

Query: 472 IGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVS 505
           +G    H     A +    +LE     P H  L+S
Sbjct: 437 LGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLS 471



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 187/395 (47%), Gaps = 7/395 (1%)

Query: 116  RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            R++H  +   G   ++  AN LV  Y+    L+DA  +F  +   D VSW+ ++ G    
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 176  EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                     F+++      P+ +T    ++AC  ++  ++GR +H  + K  +  D  V 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 236  VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
              LVDMY KC  +++AR +F  M E++L+ W ++I G+ + G   E+  LF  M  EGV 
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 296  FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             D+  + TV+ + A   A+   + +     +  F+ D  +  ++ID + KCG VE A +I
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 356  FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            F      ++++ ++MI AY   G G +AL L+  M    I P+     SLL AC++    
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054

Query: 416  EQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP---DRGIVSWSAM 471
            E+G +    + + +    D      +V++  + G +D+A +    +    D G+  W A 
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGL--WGAF 1112

Query: 472  IGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVS 505
            +G    H     A +    +LE     P H  L+S
Sbjct: 1113 LGACRTHKDVXLAEKAATSLLELQPQNPGHYILLS 1147



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 142/268 (52%), Gaps = 2/268 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC   K+L +G  +H IV   G D D FV  +LV MY KC    D+R LFD + ER 
Sbjct: 166 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+W  +   Y  C    E++  F++M   G+ P++ ++ +++ ACA  G     R I  
Sbjct: 226 LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 285

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  +  +  D+    A++DMYAK G +E A  +F  +E  +++SW+A+IA    H     
Sbjct: 286 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 345

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
           AL LF  M SS + P+  T  S L AC+   L E G +   S+ +   +++D      +V
Sbjct: 346 ALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVV 405

Query: 240 DMYAKCGSMDEA-RMIFHLMPEKNLIAW 266
           D+  + G +DEA ++I  +  EK+   W
Sbjct: 406 DLLGRAGRLDEALKLIKSMTIEKDEGLW 433



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            V++AC   K+L +G  +H IV   G D D FV  +LV MY KC    D+R LFD + ER 
Sbjct: 842  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERD 901

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V+W  +   Y  C    E++  F +M   G+ P++ ++ +++ ACA  G     R I  
Sbjct: 902  LVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDD 961

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            Y  +  +  D+    A++DM+AK G +E A  +F  +E  +++SW+A+IA    H     
Sbjct: 962  YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 1021

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
            AL LF  M  S I PN  T  S L AC+   L E G +    + +   ++ D      +V
Sbjct: 1022 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVV 1081

Query: 240  DMYAKCGSMDEA-RMIFHLMPEKNLIAW 266
            D+  + G +DEA ++I  +  EK+   W
Sbjct: 1082 DLLGRAGRLDEALKLIXSMTXEKDEGLW 1109



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           Q +QVH      G + +    N LV  Y+   ++DDA   F  +  R  VSWS M+GG A
Sbjct: 753 QVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFA 812

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK--HHFESMEKKFGIQP 534
           + G        F +++  G  P++ TL  V+ AC     +   +  HH   +  KFG+  
Sbjct: 813 KVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH---IVYKFGLD- 868

Query: 535 MQEHYAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             +H+ C  ++D+ G+  + ++A  L D M  + +   W  ++G 
Sbjct: 869 -LDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGG 911


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/572 (40%), Positives = 349/572 (61%), Gaps = 21/572 (3%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           Y  A+  C        GRQ+H  ++    +    +   LV MYA+CG++++AR +   MP
Sbjct: 38  YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E+N+++W  +ISG+ QN    +A  LF  M R G                    I   KQ
Sbjct: 98  ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAG--------------------IHQVKQ 137

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
           VHA +VKT FE   ++ +SL+D Y K  ++++A ++F    A D+V+ T++++ Y Q GL
Sbjct: 138 VHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGL 197

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
            EEAL L+  + +  +  +    ++LLNA + LS+ + GKQVH  I++          NS
Sbjct: 198 DEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNS 257

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
           L++MY+KCG +  + R F  +P+R +VSW+AM+ G  +HG   E +Q+F  M  D V P+
Sbjct: 258 LIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMC-DEVKPD 316

Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
            +TL++VL   +H GLV E    F+ + K+       EHY C+ID+LGR+G+ Q+A+ L+
Sbjct: 317 SVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLI 376

Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
           + MPFQ   ++WG+LLGA R++ NV VG+  A+ L  IEPE +  +V+LSNIYA+AGMW 
Sbjct: 377 EKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWK 436

Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
           +V +VR+ M    + KEPG SW+ +   ++TF   +R H R ++I AK+ E+   +  AG
Sbjct: 437 DVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAG 496

Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
           +VP +   LHDV++ +KE++L  HSEKLA+ FGL++TP   TI+V KNLRICVDCH   +
Sbjct: 497 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAK 556

Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+SK+  REI +RD NRFH    G+C+CG YW
Sbjct: 557 FVSKVYGREISLRDKNRFHLITEGACTCGDYW 588



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 186/366 (50%), Gaps = 44/366 (12%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C  ++ L  G QVH  +V  G+    ++A  LV+MYA+CG   D+R + D +PER+VVSW
Sbjct: 45  CVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSW 104

Query: 65  NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIK 124
            ++ S Y   +  ++A   F  M+ +GI                       +++H +++K
Sbjct: 105 TAMISGYSQNERPDQAWELFIMMLRAGIHQV--------------------KQVHAFAVK 144

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
             ++  MF  ++L+DMYAK  N+++A  VF  +   D+VS+ A+++G      ++ AL L
Sbjct: 145 TNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDL 204

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F+ + +  +  N  T+T+ L A +G+   + G+Q+H  +++ E+     +   L+DMY+K
Sbjct: 205 FRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSK 264

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CG +  +R +F  MPE+++++WN ++ G+ ++G   E   LF  M  E V  D  TL  V
Sbjct: 265 CGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAV 323

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS------------LIDAYGKCGHVEDA 352
           L   +           H   V    +  D+IV              +ID  G+ G ++ A
Sbjct: 324 LSGYS-----------HGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKA 372

Query: 353 VKIFKE 358
           + + ++
Sbjct: 373 LNLIEK 378


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/535 (42%), Positives = 332/535 (62%), Gaps = 6/535 (1%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-NGGDMEAASLFPWMYREGVGF 296
           LV MYAK G +D+A  +F  MPE+N++ W  V++     +G   EA      M+R+GV  
Sbjct: 121 LVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAP 180

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +  T S+VL +  +    GV   +HA +VK   +SD ++ +SLIDAY K G ++   ++F
Sbjct: 181 NAYTFSSVLGACGT---PGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVF 237

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E    DLV   S+I  +AQ G G  A++L++ M+D   + +    +S+L AC  +   E
Sbjct: 238 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLE 297

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+QVH H++K+    D    N+L++MY KCGS++DA+  F  +P R ++SWS MI GLA
Sbjct: 298 AGRQVHAHVLKY--ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLA 355

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G+  EAL++F  M  +GV PN IT+V VL AC+HAGLV +  ++F SM+K FGIQP +
Sbjct: 356 QNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPER 415

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EH+ CM+D+LGRAGK  EA+E +  M  + +A +W  LLGA R++K+  +  +AA  +  
Sbjct: 416 EHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILK 475

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP+     VLLSN YA    W +  K  + M+D  +KKEPG SWIE++  V+ F  GD 
Sbjct: 476 LEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDL 535

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  S  I  +L+ +   ++  GYVP  E  L D+   +KE LL +HSEK+A+AFG +  
Sbjct: 536 SHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHA 595

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G  IR+ KNLRIC DCH   + +SK   R II+RD  RFHHF++G+CSCG YW
Sbjct: 596 VGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/443 (32%), Positives = 232/443 (52%), Gaps = 54/443 (12%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL-EEAVCFFKEMVL 89
           FV+NSLV MYAK G   D+ RLFD +PER+VV+W ++ +   + D   EEA+ F   M  
Sbjct: 116 FVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWR 175

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+ PN ++ SS++ AC   G   +   +H  ++K+G DSD+F  ++L+D Y K+G+L+ 
Sbjct: 176 DGVAPNAYTFSSVLGACGTPG---VLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDG 232

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
              VF ++   D+V WN++IAG         A++LF +MK +  + N  T TS L+AC G
Sbjct: 233 GRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTG 292

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           M + E GRQ+H  ++K E   D I+   L+DMY KCGS+++A  +FH MP++++I+W+ +
Sbjct: 293 MVMLEAGRQVHAHVLKYE--RDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTM 350

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG  QNG   EA  +F  M  EGV  ++ T+  VL +  S   +      +  S+K  F
Sbjct: 351 ISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFA-CSHAGLVEDGWYYFRSMKKLF 409

Query: 330 --ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             + +    N ++D  G+ G +++AV+  +                              
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIR------------------------------ 439

Query: 388 LEMQDREINPDSFVCSSLLNAC-----ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
               D  + PD+ +  +LL AC      NL+AY   +     I+K     D  A   L N
Sbjct: 440 ----DMNLEPDAVIWRTLLGACRMHKSGNLAAYAARE-----ILKLE-PDDQGARVLLSN 489

Query: 443 MYAKCGSIDDADRAFSEIPDRGI 465
            YA      DA++++  + DRG+
Sbjct: 490 TYADLRQWTDAEKSWKAMRDRGM 512



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 199/405 (49%), Gaps = 20/405 (4%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGY--------SIKLGYDSDMFSANALVDMYAKV 144
           R +  SL+ ++  C   G +  GR IH +            G    +F +N+LV MYAK 
Sbjct: 69  RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE-HNDWALKLFQQMKSSEINPNMFTYTSA 203
           G L+DA+ +F  +   ++V+W  V+A     +   + AL+    M    + PN +T++S 
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L AC    +      LH S +K+ + SD  V   L+D Y K G +D  R +F  M  ++L
Sbjct: 189 LGACGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDL 245

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           + WN +I+G  Q+G  + A  LF  M   G   +Q TL++VL++      +   +QVHA 
Sbjct: 246 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAH 305

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            +K  +E D  + N+L+D Y KCG +EDA  +F      D+++ ++MI+  AQ G   EA
Sbjct: 306 VLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEA 363

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVN 442
           L+++  M+   + P+      +L AC++    E G      + K FG   +    N +V+
Sbjct: 364 LRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVD 423

Query: 443 MYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGRGKEA 484
           +  + G +D+A     ++   PD   V W  ++G    H  G  A
Sbjct: 424 LLGRAGKLDEAVEFIRDMNLEPD--AVIWRTLLGACRMHKSGNLA 466



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 8/285 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L     +H   V  G DSD FV +SL+  Y K G+    RR+FD +  R 
Sbjct: 188 VLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRD 244

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V WNS+ + +        A+  F  M  +G   N+ +L+S++ AC G      GR++H 
Sbjct: 245 LVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHA 304

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  Y+ D+   NAL+DMY K G+LEDA A+F  +   D++SW+ +I+G   +  +  
Sbjct: 305 HVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAE 362

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLV 239
           AL++F  MKS  + PN  T    L AC+   L E G     S+ K+  I+ +      +V
Sbjct: 363 ALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMV 422

Query: 240 DMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISG-HLQNGGDMEA 282
           D+  + G +DEA   I  +  E + + W  ++    +   G++ A
Sbjct: 423 DLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAA 467


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/658 (37%), Positives = 379/658 (57%), Gaps = 41/658 (6%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAK--VGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           +++H  +++ G+  D + +  LV  YA     NL  A+ VF+ + +P++  +N +I GC+
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
            +     A+  + +M  +   PN FTY +  KAC   E  E G Q+H  +IK  +  D  
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +    + MY   G ++ AR +       ++I +N +I G+L+  G++EAA    W   + 
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLK-CGEVEAAKELFWSMED- 224

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
                       K+V S+                         N ++    KCG +E+A 
Sbjct: 225 ------------KNVGSW-------------------------NVMVSGMAKCGMIEEAR 247

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F E    + ++ ++MI  Y + G  +EAL+++  MQ  EI P  FV SS+L ACANL 
Sbjct: 248 ELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLG 307

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A +QG+ +H ++       D   G +LV+MYAKCG +D A   F ++  + + +W+AMI 
Sbjct: 308 ALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMIC 367

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           GL  HGR ++A+++F +M +    PN ITL+ VL AC H+G+V E    F SME+ +GI+
Sbjct: 368 GLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIE 427

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHY C++D+LGRAG   EA E++ +MP + +A+VWGALLGA R + +VE+G+   ++
Sbjct: 428 PGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKI 487

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  +EP+ S  + LLSNIYA AG WD+VA VR+ MK+  +K   G+S I+    V+ F +
Sbjct: 488 LLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKM 547

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD SH + K IY  L  +   L   G+ P     L D+EE EKE  L +HSEKLA+AFGL
Sbjct: 548 GDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGL 607

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I T PG TI V KNLR+C DCH++F+ IS++  REIIVRD  R+HHF+ G+CSC  +W
Sbjct: 608 INTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 220/515 (42%), Gaps = 100/515 (19%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKC--GNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           QVH + + TG   D +V+ +LV  YA     N   + ++F+ +P  +V  +N +    + 
Sbjct: 48  QVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQ 107

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY------ 127
            +   +A+C + +M+++  RPN+F+  ++  AC  +  +  G ++H + IK G       
Sbjct: 108 NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHI 167

Query: 128 -------------------------DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI 162
                                    +SD+   NA++D Y K G +E A  +F  +E  ++
Sbjct: 168 RSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNV 227

Query: 163 VSWNAVIAGCV--------------LHEHND--W---------------ALKLFQQMKSS 191
            SWN +++G                + E N+  W               AL++F  M+  
Sbjct: 228 GSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQRE 287

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           EI P  F  +S L ACA +   + GR +H  +       D ++G  LVDMYAKCG +D A
Sbjct: 288 EIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMA 347

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +F  M +K +  WN +I G   +G   +A  LF  M ++    +  TL  VL + A  
Sbjct: 348 WDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACA-- 405

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
                    H+  V         I NS+ + YG    +E  ++ +     VDL+    ++
Sbjct: 406 ---------HSGMVDEGLR----IFNSMEEVYG----IEPGMEHY--GCVVDLLGRAGLL 446

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
                 G  EE       M    + P + V  +LL AC      E G++V   +++    
Sbjct: 447 ------GEAEEV------MYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQ 494

Query: 432 -SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            S  +A   L N+YA+ G  DD       + +RG+
Sbjct: 495 NSGRYA--LLSNIYARAGRWDDVANVRKLMKERGV 527



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 2/177 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L  G  +H  V       D  +  +LV MYAKCG    +  +F+ + ++ 
Sbjct: 299 VLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKE 358

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V +WN++          E+A+  F +M     RPN  +L  +++ACA SG    G +I  
Sbjct: 359 VFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFN 418

Query: 121 YSIKL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
              ++ G +  M     +VD+  + G L +A  V   +   P    W A++  C  H
Sbjct: 419 SMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKH 475


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/701 (35%), Positives = 398/701 (56%), Gaps = 9/701 (1%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC+S + L  G ++H  ++ +    D  + N ++ MY KCG+  D+R +FD +PER++VS
Sbjct: 73  ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 132

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           + S+ + Y       EA+  + +M+ + + P++F+  S+I ACA +GD +LG+++H   I
Sbjct: 133 YTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVI 192

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           KL   S + + NAL+ MY +   + DA  VF  I   D++SW+++IAG         AL 
Sbjct: 193 KLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALS 252

Query: 184 LFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
             ++M S  + +PN + + S+LKAC+ +   + G Q+H   IK+E+  + I G  L DMY
Sbjct: 253 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMY 312

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           A+CG +D AR +F+ +   +  +WN++I+G   NG   EA S+F  M   G   D  +L 
Sbjct: 313 ARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLR 372

Query: 303 TVLKSVASFQAIGVCK--QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-S 359
           ++L   A  + + +C+  Q+H+  +K  F +D  + NSL+  Y  C  +     +F++  
Sbjct: 373 SLL--CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFR 430

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           +  D V+  +++TA  Q     E L+L+  M   E  PD     +LL  C  +S+ + G 
Sbjct: 431 NKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 490

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           QVH +  K G + + F  N L++MYAKCGS+  A R F  + +  +VSWS +I G AQ G
Sbjct: 491 QVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSG 550

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G+EAL +F +M   G+ PNH+T V VL AC+H GLV E    +  M+ + GI P +EH 
Sbjct: 551 FGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHC 610

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           +C++D+L RAG   EA   +D M  + +  VW  LL A +   NV++ Q AAE +  I+P
Sbjct: 611 SCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDP 670

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             S+ HVLL +++AS+G W++ A +R  MK + +KK PG SWI+V+DK++ F   D  H 
Sbjct: 671 FNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHP 730

Query: 660 RSKEIYAKLDEV-SDLLNKAGYVPMVETDLHDVEESEKEQL 699
              +IY  L  + S +L++    P  +     + E+EK  +
Sbjct: 731 ERDDIYTVLHNIWSQMLDECN--PQHKKRFQFIHETEKTNI 769



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 244/487 (50%), Gaps = 12/487 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KAC    D+ LG Q+H  V+     S     N+L+ MY +     D+ ++F  IP + 
Sbjct: 171 IIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKD 230

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++SW+S+ + +    F  EA+   KEM+  G+  PNE+   S + AC+       G +IH
Sbjct: 231 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 290

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  IKL    +  +  +L DMYA+ G L+ A  VF  IE PD  SWN +IAG   + + D
Sbjct: 291 GLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYAD 350

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL--GRQLHCSLIKMEIKSDPIVGVG 237
            A+ +F +M++S   P+  +  S L  CA  +   L  G Q+H  +IK    +D  V   
Sbjct: 351 EAVSVFSEMRNSGFIPDAISLRSLL--CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNS 408

Query: 238 LVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           L+ MY  C  +     +F     K + ++WN +++  LQ+   +E   LF  M       
Sbjct: 409 LLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEP 468

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  T+  +L+      ++ +  QVH  S KT    + +I N LID Y KCG +  A +IF
Sbjct: 469 DHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIF 528

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
                 D+V+ +++I  YAQ G GEEAL L+ EM+   I P+      +L AC+++   E
Sbjct: 529 DSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVE 588

Query: 417 QGKQVH-VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMI 472
           +G +++ +   + G        + +V++ A+ G +++A+R   E+   PD  +V W  ++
Sbjct: 589 EGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPD--VVVWKTLL 646

Query: 473 GGLAQHG 479
                 G
Sbjct: 647 SACKTQG 653



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 236/478 (49%), Gaps = 6/478 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S+I AC+ S     GRKIH + +      D    N ++ MY K G+L DA  VF  +   
Sbjct: 69  SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 128

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VS+ +VI G   +     A+ L+ +M  +++ P+ F + S +KACA      LG+QLH
Sbjct: 129 NLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLH 188

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             +IK+E  S  I    L+ MY +   M +A  +F+ +P K+LI+W+ +I+G  Q G + 
Sbjct: 189 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEF 248

Query: 281 EAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           EA S    M   GV   ++    + LK+ +S        Q+H L +K     +     SL
Sbjct: 249 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSL 308

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
            D Y +CG ++ A ++F +    D  +   +I   A  G  +EA+ ++ EM++    PD+
Sbjct: 309 CDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDA 368

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               SLL A     A  QG Q+H  IIK GF++D    NSL+ MY  C  +      F +
Sbjct: 369 ISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFED 428

Query: 460 IPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVA 517
             ++   VSW+A++    QH +  E L++F  ML     P+HIT+ ++L  C   + L  
Sbjct: 429 FRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 488

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++ H  S   K G+   Q     +ID+  + G  ++A  + D+M    +   W  L+
Sbjct: 489 GSQVHCYSW--KTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMD-NGDVVSWSTLI 543



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 183/324 (56%), Gaps = 5/324 (1%)

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           K+S     + TY S + AC+       GR++H  ++    K D I+   ++ MY KCGS+
Sbjct: 56  KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 115

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            +AR +F  MPE+NL+++  VI+G+ QNG + EA +L+  M +  +  DQ    +++K+ 
Sbjct: 116 RDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKAC 175

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           A    + + KQ+HA  +K   ES  +++  N+LI  Y +   + DA K+F    A DL++
Sbjct: 176 ACAGDVVLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLIS 233

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
            +S+I  ++Q G   EAL    EM    + +P+ ++  S L AC++L   + G Q+H   
Sbjct: 234 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 293

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK     +  AG SL +MYA+CG +D A R F++I      SW+ +I GLA +G   EA+
Sbjct: 294 IKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAV 353

Query: 486 QMFGQMLEDGVLPNHITLVSVLCA 509
            +F +M   G +P+ I+L S+LCA
Sbjct: 354 SVFSEMRNSGFIPDAISLRSLLCA 377



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 215/458 (46%), Gaps = 45/458 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC+S      G Q+HG+ +      +     SL  MYA+CG    +RR+F+ I     
Sbjct: 274 LKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDT 333

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            SWN + +   +  + +EAV  F EM  SG  P+  SL S++ A         G +IH +
Sbjct: 334 ASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSF 393

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLHEHNDW 180
            IK G+ +D+   N+L+ MY    +L     +F+D  +  D VSWNA++  C+ HE    
Sbjct: 394 IIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVE 453

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+LF+ M  SE  P+  T  + L+ C  +   +LG Q+HC   K  +  +  +  GL+D
Sbjct: 454 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLID 513

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS+ +AR IF  M   ++++W+ +I G+ Q+G   EA  LF  M   G+  +  T
Sbjct: 514 MYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVT 573

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL +         C  V                          G VE+ +K++    
Sbjct: 574 FVGVLTA---------CSHV--------------------------GLVEEGLKLYAIMQ 598

Query: 361 AVDLVA-----CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
               ++     C+ ++   A+ G   EA +   EM+   + PD  V  +LL+AC      
Sbjct: 599 TEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMK---LEPDVVVWKTLLSACKTQGNV 655

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           +  ++   +I+K    + T A   L +M+A  G+ +DA
Sbjct: 656 DLAQKAAENILKIDPFNST-AHVLLCSMHASSGNWEDA 692



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 1/213 (0%)

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  +++ + +S +++   +++H   + +  + D  + N ++  YGKCG + DA ++F   
Sbjct: 66  TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +LV+ TS+IT Y+Q G   EA+ LYL+M   ++ PD F   S++ ACA       GK
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGK 185

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  +IK    S   A N+L+ MY +   + DA + F  IP + ++SWS++I G +Q G
Sbjct: 186 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLG 245

Query: 480 RGKEALQMFGQMLEDGVL-PNHITLVSVLCACN 511
              EAL    +ML  GV  PN     S L AC+
Sbjct: 246 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 278



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 5/235 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C     L LG QVH     TG   ++F+ N L+ MYAKCG+   +RR+FD++    
Sbjct: 476 LLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGD 535

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW++L   Y    F EEA+  F+EM  SGI PN  +   ++ AC+  G    G K++ 
Sbjct: 536 VVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYA 595

Query: 121 -YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               + G        + +VD+ A+ G+L +A     +++  PD+V W  +++ C    + 
Sbjct: 596 IMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNV 655

Query: 179 DWALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           D A K  +  +K    N        ++ A +G    E    L  S+ K ++K  P
Sbjct: 656 DLAQKAAENILKIDPFNSTAHVLLCSMHASSGNW--EDAALLRSSMKKHDVKKIP 708


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/699 (35%), Positives = 389/699 (55%), Gaps = 14/699 (2%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSAN 135
           L EA  FF+EM  +G+  + +S   +  AC        GR +H   +++G ++  +   N
Sbjct: 62  LNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHN-RMRMGIENPSVLLQN 120

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            ++ MY + G+LEDA  +F ++   + VS   +I+        D A+ LF +M  S   P
Sbjct: 121 CVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKP 180

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
               YT+ LK+       ++GRQ+H  +I+  + S+  +  G+V+MY KCG +  A+ +F
Sbjct: 181 PSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVF 240

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  K  +AW  ++ G+ Q G   +A  LF  +  EGV +D    S VLK+ AS + + 
Sbjct: 241 DQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELR 300

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             KQ+HA   K   E +  +   L+D Y KC   E A + F+E    + V+ +++I+ Y 
Sbjct: 301 FGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 360

Query: 376 QFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           Q    EEA+K +  ++ +  +  +SF  +S+  AC+ L+    G QVH   IK   +   
Sbjct: 361 QMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 420

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           +  ++L+ MY+KCG +DDA   F  + +  IV+W+A I G A +G   EAL++F +M+  
Sbjct: 421 YGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 480

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G+ PN +T ++VL AC+HAGLV + KH+ ++M +K+ + P  +HY CMIDI  R+G   E
Sbjct: 481 GMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 540

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           A+  +  MPF+ +A  W   L     +KN+E+G+ A E L  ++PE ++ +VL  N+Y  
Sbjct: 541 ALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTW 600

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
           AG W+  A+V + M +  LKKE   SWI+ K K++ F VGD+ H +S+EIY KL E    
Sbjct: 601 AGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFDGF 660

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG--ATIRVKKNLRICV 732
           +         E D+     +E+ + L  HSE+LA+AFGLI+      A I+V KNLR C 
Sbjct: 661 M---------EGDMFQCSMTERREQLLDHSERLAIAFGLISVNGNARAPIKVFKNLRACP 711

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH   + +S +   EI++RD  RFHHF+ G CSC  YW
Sbjct: 712 DCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 249/508 (49%), Gaps = 10/508 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC   + L  G  +H  +     +    + N ++ MY +CG+  D+ +LFD + + +
Sbjct: 87  LFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLN 146

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS  ++ S Y     L++AV  F  M+ SG +P     ++++ +        +GR+IH 
Sbjct: 147 AVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHA 206

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ G  S+      +V+MY K G L  A  VF  +     V+W  ++ G         
Sbjct: 207 HVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARD 266

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF  + +  +  + F ++  LKACA +E    G+Q+H  + K+ ++ +  VG  LVD
Sbjct: 267 ALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVD 326

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY-REGVGFDQT 299
            Y KC S + A   F  + E N ++W+ +ISG+ Q     EA   F  +  +  V  +  
Sbjct: 327 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSF 386

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T +++ ++ +      +  QVHA ++K +     Y  ++LI  Y KCG ++DA ++F+  
Sbjct: 387 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESM 446

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+VA T+ I+ +A +G   EAL+L+ +M    + P+S    ++L AC++    EQGK
Sbjct: 447 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 506

Query: 420 Q-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
             +   + K+         + ++++YA+ G +D+A R    +P +   +SW   + G   
Sbjct: 507 HYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWT 566

Query: 478 HGR-------GKEALQMFGQMLEDGVLP 498
           H         G+E  Q+  +     VLP
Sbjct: 567 HKNLELGKIAGEELRQLDPEDTAGYVLP 594


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/534 (41%), Positives = 339/534 (63%), Gaps = 5/534 (0%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++MY K   +++A  +F  MP++N+I+W  +IS + +     +A  L   M R+ V  +
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S+VL+S      +   + +H   +K   ESD ++ ++LID + K G  EDA+ +F 
Sbjct: 162 VYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    D +   S+I  +AQ    + AL+L+  M+      +    +S+L AC  L+  E 
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G Q HVHI+K+    D    N+LV+MY KCGS++DA R F+++ +R +++WS MI GLAQ
Sbjct: 279 GMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           +G  +EAL++F +M   G  PN+IT+V VL AC+HAGL+ +  ++F SM+K +GI P++E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CMID+LG+AGK  +A++L++ M  + +A  W  LLGA R+ +N+ + ++AA+ + A+
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +PE + T+ LLSNIYA++  WD+V ++R  M+D  +KKEPG SWIEV  +++ F +GD S
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNS 516

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H +  E+  KL+++   L   GYVP     L D+E  + E  L HHSEKLA+AFGL+  P
Sbjct: 517 HPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLP 576

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
               IR++KNLRIC DCH   +  SK+  R I++RD  R+HHF++G CSCG YW
Sbjct: 577 IEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 230/470 (48%), Gaps = 49/470 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C S + +  G  +   + F G     F+ N L+ MY K     D+ +LFD +P+R+
Sbjct: 67  LIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRN 126

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW ++ S Y  C   ++A+     M+   +RPN ++ SS++ +C G  D    R +H 
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHC 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G +SD+F  +AL+D++AK+G  EDA++VF ++   D + WN++I G   +  +D 
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF++MK +       T TS L+AC G+ L ELG Q H  ++K +   D I+   LVD
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVD 301

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS+++A  +F+ M E+++I W+ +ISG  QNG   EA  LF  M   G   +  T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +  VL                A S     E   Y   S+   YG      D V+      
Sbjct: 362 IVGVL---------------FACSHAGLLEDGWYYFRSMKKLYGI-----DPVR------ 395

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA-----NLSAY 415
             +   C  MI    + G  ++A+KL  EM   E  PD+    +LL AC       L+ Y
Sbjct: 396 --EHYGC--MIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEY 448

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              K + +         D      L N+YA     D  +   + + DRGI
Sbjct: 449 AAKKVIALD------PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/648 (36%), Positives = 368/648 (56%), Gaps = 7/648 (1%)

Query: 42  KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLS 100
           K G+  ++RR+FD + ++  +SW +L S YV+ +   EA+  FK M V SG+R + F LS
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
               AC  + D   G  +HGY++K G  + +F  +AL+DMY K G + +   VF ++   
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A+I G V   +N  AL  F +M  S +  + +T+  ALKACA       GR++H
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              +K        V   L  MY KCG ++    +F  M  +++++W  +I+  +Q G + 
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
            A   F  M    V  ++ T + V+   A+   I   +Q+HAL +     +   + NS++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y KCG +  +  IF E +  D+V+ +++I  Y+Q G   EA +L   M+     P  F
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEF 420

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+L+AC N++  E GKQ+H +++  G        ++L+NMY KCGSI++A R F   
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAA 480

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
            +  IVSW+AMI G A+HG  +E + +F ++   G+ P+ +T + VL AC+HAGLV    
Sbjct: 481 ENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGF 540

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
            +F +M KK+ I P +EHY CMID+L RAG+  +A  +++ MPF  +  VW  LL A R+
Sbjct: 541 RYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRV 600

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           + +VE G+  AE +  +EP  + TH+ L+NIYAS G W   A +R+ MK   + KEPG S
Sbjct: 601 HGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWS 660

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLD------EVSDLLNKAGYVP 682
           WI+VKD V+ F  GDRSH + ++IY  LD      E++D + + G++P
Sbjct: 661 WIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLP 708



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 267/509 (52%), Gaps = 6/509 (1%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           KAC    D+  G  +HG  V TG  +  FV ++L+ MY K G   + RR+F  +P R+VV
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           SW ++ +  V   + +EA+ +F EM  S +  + ++ +  + ACA SG    GR+IH  +
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           +K G+D   F AN L  MY K G LE  + +F+ +   D+VSW  +I   V     + A+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           + F +M+ S+++PN +T+ + +  CA +   E G QLH  ++ + + +   V   ++ MY
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           AKCG +  + +IFH M  +++++W+ +I+G+ Q G   EA  L  WM  EG    +  L+
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALA 423

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           +VL +  +   +   KQ+HA  +    E    ++++LI+ Y KCG +E+A +IF  +   
Sbjct: 424 SVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEND 483

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQV 421
           D+V+ T+MI  YA+ G   E + L+ ++    + PDS     +L+AC++    + G +  
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYF 543

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG- 479
           +    K+           ++++  + G + DA+     +P  R  V WS ++     HG 
Sbjct: 544 NAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGD 603

Query: 480 --RGKEALQMFGQMLEDGVLPNHITLVSV 506
             RG+   +   Q LE      HITL ++
Sbjct: 604 VERGRRTAERILQ-LEPNCAGTHITLANI 631



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 230/433 (53%), Gaps = 2/433 (0%)

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           +D+  +N  +    K G+L +A  +F  +   D +SW  +I+G V    +  AL LF+ M
Sbjct: 47  TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM 106

Query: 189 K-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           +  S +  + F  + A KAC        G  LH   +K  + +   VG  L+DMY K G 
Sbjct: 107 RVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGK 166

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           + E R +FH MP +N+++W  +I+G ++ G + EA   F  M+R  V +D  T +  LK+
Sbjct: 167 IFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKA 226

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            A   A+   +++HA ++K  F+   ++ N+L   Y KCG +E  + +F++ S  D+V+ 
Sbjct: 227 CADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSW 286

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T++IT   Q G  E A++ ++ M++ +++P+ +  +++++ CANL+  E G+Q+H  I+ 
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH 346

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  +     NS++ MYAKCG +  +   F E+  R IVSWS +I G +Q G   EA ++
Sbjct: 347 LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFEL 406

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
              M  +G  P    L SVL AC +  ++   K    +     G++      + +I++  
Sbjct: 407 LSWMRMEGPKPTEFALASVLSACGNMAILEHGK-QLHAYVLSIGLEHTAMVLSALINMYC 465

Query: 548 RAGKFQEAMELVD 560
           + G  +EA  + D
Sbjct: 466 KCGSIEEASRIFD 478



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 223/503 (44%), Gaps = 54/503 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC     L  G ++H   +  GFD   FVAN+L  MY KCG       LF+ +  R V
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW ++ +  V     E AV  F  M  S + PNE++ +++I+ CA       G ++H  
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            + LG  + +   N+++ MYAK G L  +  +F ++   DIVSW+ +IAG     H   A
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEA 403

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
            +L   M+     P  F   S L AC  M + E G+QLH  ++ + ++   +V   L++M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCGS++EA  IF      ++++W  +I+G+ ++G   E   LF  + R G+  D  T 
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523

Query: 302 STVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
             VL   S A    +G  +  +A+S K            +ID   + G + DA  +    
Sbjct: 524 IGVLSACSHAGLVDLGF-RYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMI--- 579

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                                 EA+  +          D  V S+LL AC      E+G+
Sbjct: 580 ----------------------EAMPFH---------RDDVVWSTLLRACRVHGDVERGR 608

Query: 420 QVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGIVS---WS----- 469
           +    I++   +    AG   +L N+YA  G   +A      +  +G++    WS     
Sbjct: 609 RTAERILQ---LEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVK 665

Query: 470 ----AMIGGLAQHGRGKEALQMF 488
               A + G   H +G++   M 
Sbjct: 666 DLVFAFVAGDRSHPQGEDIYNML 688



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+  C +   +  G Q+H +++  G  +   V NS++ MYAKCG    S  +F  +  R 
Sbjct: 324 VISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW+++ + Y     + EA      M + G +P EF+L+S+++AC        G+++H 
Sbjct: 384 IVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHA 443

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y + +G +      +AL++MY K G++E+A  +F   E+ DIVSW A+I G   H ++  
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSRE 503

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG-RQLHCSLIKMEIKSDPIVGVGLV 239
            + LF+++    + P+  T+   L AC+   L +LG R  +    K +I         ++
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMI 563

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           D+  + G + +A  +   MP  ++ + W+ ++
Sbjct: 564 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 8/189 (4%)

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C +L   E+        I F   +D    N  +    K G + +A R F ++  +  +SW
Sbjct: 24  CIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISW 83

Query: 469 SAMIGGLAQHGRGKEALQMFGQM-LEDGVL--PNHITLVSVLCACNHAGLVAEAKHHFES 525
           + +I G        EAL +F  M +E G+   P  ++L    C  N      E  H +  
Sbjct: 84  TTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAV 143

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNV 584
              K G+       + ++D+  + GK  E   +   MP + N   W A++ G  R   N 
Sbjct: 144 ---KTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSWTAIITGLVRAGYNK 199

Query: 585 EVGQHAAEM 593
           E   + +EM
Sbjct: 200 EALVYFSEM 208


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/647 (36%), Positives = 378/647 (58%), Gaps = 4/647 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            + AC       L   +H +++  GF +  FV++ L+ MY+K     ++R LFD +PER 
Sbjct: 47  TISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERD 106

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSLLGR 116
            VSWNS+ + Y      EEA   F  M+ S     +  ++F+L++++ AC G G S +G+
Sbjct: 107 DVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGK 166

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +HGY++K+G+DSD+F + + V MY K G L+ A   F  IE+ DIV+WN +I G   + 
Sbjct: 167 CVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNC 226

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           + + A++LF QM+     PN  T+   LKA   M    +GR  H  ++K+    D  V  
Sbjct: 227 YEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVAT 286

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMY+K   +++    F  M ++NL+++N +I+G+   G   EA  ++  +  EG+  
Sbjct: 287 ALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEP 346

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  T   +  S +    +    QVH  SVK   +SD  + NS+++ Y KCG  + A++ F
Sbjct: 347 DSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAF 406

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +  +  + V    +I+ +AQ G GE+AL  + +M+      D F  SS++ A ++ +A E
Sbjct: 407 ESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVE 466

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QG+ +H H++K G     + G+++++MY+KCG ++DA + FS +P++ +VSW++MI G A
Sbjct: 467 QGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYA 526

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G  KEAL +F +M   G+LP  +T V +L AC+HAGLV E ++ +  M   +GI P  
Sbjct: 527 QNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSM 586

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EH  CM+D+LGRAG  +EA   + +  F     +WG+LL A  ++KN +VG  AA+    
Sbjct: 587 EHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLF 646

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
           +EP  SS++  LSNIYAS  +W  V+++R  MKD  ++KEPG SWIE
Sbjct: 647 LEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 174/523 (33%), Positives = 276/523 (52%), Gaps = 8/523 (1%)

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E +VV W S  +       +++A+  F +M+ +GI PN  + S+ I+ACA S    L   
Sbjct: 3   ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H   +K G+ + +F ++ L+ MY+K   +++A  +F D+   D VSWN++IAG      
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 178 NDWALKLFQQMKSSEINPNM----FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           N+ A  LF  M +S  N  +    FT  + LKAC G+    +G+ +H   +K+   SD  
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V    V MY KCG +D A + F  +  K+++AWN +I+G+ QN  + EA  LF  M  EG
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              + TT   VLK+  +     V +  HA  +K     D ++  +L+D Y K   +ED  
Sbjct: 243 FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVE 302

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           + F E S  +LV+  ++IT Y+  G  EEAL++Y ++Q   + PDSF    L ++C+  S
Sbjct: 303 RAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSS 362

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
              +G QVHVH +KFG  SD   GNS+VN Y+KCG  D A  AF  I     V W+ +I 
Sbjct: 363 TVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIIS 422

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGI 532
           G AQ+G G++AL  F +M +     +  +  SV+ A +    V + +H H   M  K G+
Sbjct: 423 GFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVM--KSGL 480

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                  + +ID+  + G  ++A ++   MP + N   W +++
Sbjct: 481 DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMI 522



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 184/402 (45%), Gaps = 40/402 (9%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M E N++ W   I+ + + G   +A S F  M R G+  +  T S  + + A      + 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
             +H L +K  F +  ++ + LI  Y K   +++A  +F +    D V+  SMI  Y+Q 
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 378 GLGEEALKLYLEM----QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           GL EEA  L+  M    ++ ++    F  +++L AC  L     GK VH + +K GF SD
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F   S V MY KCG +D A  AF +I ++ IV+W+ MI G AQ+   +EA+++F QM  
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 494 DGVLPNHITLVSVLCA-----------CNHAGL----------VAEAK-------HHFES 525
           +G  PN  T   VL A           C HA +          VA A        +  E 
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300

Query: 526 MEKKFGIQPMQE--HYACMIDILGRAGKFQEAMELVDTMP---FQANASVWGALLGAARI 580
           +E+ FG    +    +  +I      GK++EA+ +   +     + ++  +  L  +  +
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360

Query: 581 YKNVEVGQ--HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
              V  G   H   + F ++ + S  + ++ N Y+  G  D+
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIV-NFYSKCGFTDS 401


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 224/535 (41%), Positives = 328/535 (61%), Gaps = 6/535 (1%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ-NGGDMEAASLFPWMYREGVGF 296
           L  MYAK G +D+A  +F  MP +N++ W  V++     +G   EA      M R+GV  
Sbjct: 110 LASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAP 169

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +  T S+VL +  +    G+   VHA +VK   +SD ++ +SLIDAY K G ++   ++F
Sbjct: 170 NAYTFSSVLGACTT---PGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVF 226

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E    DLV   S+I  +AQ G G  A++L++ M+D   + +    +S+L AC  +   E
Sbjct: 227 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLE 286

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+QVH H++K+    D    N+L++MY KCGS++DAD  F  +P R ++SWS M+ GLA
Sbjct: 287 AGRQVHAHVLKYD--RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLA 344

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           Q+G+  EAL++F  M   GV PNH+T+V VL AC+HAGLV +  H+F SM++ FGIQP +
Sbjct: 345 QNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPER 404

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EH+ CM+D+LGRAGK  EA+E +  M  + ++ +W  LLGA R++KN  +  +AA  +  
Sbjct: 405 EHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILK 464

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP+     VLLSN YA    W +  K  + M+D  ++KEPG SWIE++ +V+ F  GD 
Sbjct: 465 LEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDL 524

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH  S  I  +L+ +   +   GYVP  E  L D+   +KE LL +HSEK+A+ FG +  
Sbjct: 525 SHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHA 584

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             G  IR+ KNLRIC DCH   + +SK   R I++RD  RFHHF++G+CSCG YW
Sbjct: 585 VDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/444 (32%), Positives = 227/444 (51%), Gaps = 56/444 (12%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL-EEAVCFFKEMVL 89
           FV+NSL  MYAK G   D+ R+FD +P R+VV+W ++ +     D   +EA+ F   M  
Sbjct: 105 FVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRR 164

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+ PN ++ SS++ AC   G   +   +H  ++K G DSD+F  ++L+D Y K+G+L+ 
Sbjct: 165 DGVAPNAYTFSSVLGACTTPG---MLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDG 221

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
              VF ++   D+V WN++IAG         A++LF +MK +  + N  T TS L+AC G
Sbjct: 222 GRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTG 281

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           M + E GRQ+H  ++K +   D I+   L+DMY KCGS+++A  +FH MP++++I+W+ +
Sbjct: 282 MVMLEAGRQVHAHVLKYD--RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTM 339

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTA 328
           +SG  QNG  +EA  +F  M  +GV  +  T+  VL   A   A  V    H   S+K  
Sbjct: 340 VSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVL--FACSHAGLVEDGWHYFRSMKRL 397

Query: 329 F--ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
           F  + +    N ++D  G+ G +++AV+     S                          
Sbjct: 398 FGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMS-------------------------- 431

Query: 387 YLEMQDREINPDSFVCSSLLNAC-----ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
                   + PDS +  +LL AC     A+L+AY   +     I+K     D  A   L 
Sbjct: 432 --------LEPDSVIWRTLLGACRMHKNASLAAYAARE-----ILKLE-PDDQGARVLLS 477

Query: 442 NMYAKCGSIDDADRAFSEIPDRGI 465
           N YA      DA++ +  + DRG+
Sbjct: 478 NTYADLRQWTDAEKPWKAMRDRGM 501



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 197/396 (49%), Gaps = 17/396 (4%)

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGY---SIKLGYDS--DMFSANALVDMYAKVGNL 147
           R +  SL+ ++  C   G +  GR IH +      L +D    +F +N+L  MYAK G L
Sbjct: 61  RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHE-HNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +DA+ +F  +   ++V+W  V+A     +     AL+    M+   + PN +T++S L A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C    +      +H S +K  + SD  V   L+D Y K G +D  R +F  M  ++L+ W
Sbjct: 181 CTTPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I+G  Q+G  + A  LF  M   G   +Q TL++VL++      +   +QVHA  +K
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
             ++ D  + N+L+D Y KCG +EDA  +F      D+++ ++M++  AQ G   EAL++
Sbjct: 298 --YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV 355

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYA 445
           +  M+ + + P+      +L AC++    E G      + + FG   +    N +V++  
Sbjct: 356 FDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415

Query: 446 KCGSIDDADR---AFSEIPDRGIVSWSAMIGGLAQH 478
           + G +D+A       S  PD   V W  ++G    H
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDS--VIWRTLLGACRMH 449



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 7/272 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT+   L     VH   V  G DSD FV +SL+  Y K G+    RR+FD +  R 
Sbjct: 177 VLGACTTPGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRD 233

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V WNS+ + +        A+  F  M  +G   N+ +L+S++ AC G      GR++H 
Sbjct: 234 LVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHA 293

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  YD D+   NAL+DMY K G+LEDA A+F  +   D++SW+ +++G   +  +  
Sbjct: 294 HVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVE 351

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLV 239
           AL++F  MKS  + PN  T    L AC+   L E G     S+ ++  I+ +      +V
Sbjct: 352 ALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMV 411

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           D+  + G +DEA    H M  E + + W  ++
Sbjct: 412 DLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLL 443



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ACT    L  G QVH  V+   +D D  + N+L+ MY KCG+  D+  LF  +P+R 
Sbjct: 275 VLRACTGMVMLEAGRQVHAHVL--KYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRD 332

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW+++ S         EA+  F  M   G+ PN  ++  ++ AC+ +G  L+    H 
Sbjct: 333 VISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAG--LVEDGWHY 390

Query: 121 Y-SIK--LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           + S+K   G   +    N +VD+  + G L++AV     +   PD V W  ++  C +H+
Sbjct: 391 FRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHK 450

Query: 177 HNDWA 181
           +   A
Sbjct: 451 NASLA 455


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/646 (38%), Positives = 379/646 (58%), Gaps = 8/646 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           GL++H   +  G  +D F  N+LV  YA CG   D+RR+FD +PER VVSWNSL S ++ 
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                +A      M+ SG   N  SL S++ AC    +   G  IH  ++K+G ++ +  
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 257

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE--HNDWALKLFQQMKSS 191
           ANALVDMY K G++E ++ VF  +   + VSWN+ I GC L+   + D  L++F++M   
Sbjct: 258 ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAI-GCFLNAGFYGD-VLRMFRKMSEH 315

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + P   T +S L A   +   +LGR++H   IK  +  D  V   LVDMYAK GS+++A
Sbjct: 316 NVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKA 375

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             IF  M ++N+++WN +I+  +QNG + EA  L   M + G   +  TL  VL + A  
Sbjct: 376 STIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARM 435

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            ++ + KQ+HA S++     D +I N+LID Y KCG +  A  IF E S  D V+  ++I
Sbjct: 436 ASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLI 494

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
             Y+Q     E+L L+ +M+   I+ D+      L+AC NLS ++ GK++H  +++    
Sbjct: 495 LGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLS 554

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
              F  NSL+++Y K G +  A + F++I  + + SW+ MI G   HG+   A ++F  M
Sbjct: 555 GHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELM 614

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
             DG+  +H++ ++VL AC+H GLV + K +F  M  +  I+P Q HYACM+D+LGRAG+
Sbjct: 615 KGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQ 673

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
             +  E++  MPF AN+ VWGALLGA RI+ N+E+ Q AAE LF ++PE S  + L+ N+
Sbjct: 674 LSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINM 733

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD--KVYTFTVGD 655
           YA  G W+   K+R+ MK  K++K P  SW++ +D  K+  F VGD
Sbjct: 734 YAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 779



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 250/480 (52%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC ++++   GL +H + V  G ++   +AN+LV MY K G+   S ++FD + E++
Sbjct: 226 VVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQN 285

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS   C+++  F  + +  F++M    + P   +LSS++ A    G   LGR++HG
Sbjct: 286 EVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHG 345

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           YSIK   D D+F AN+LVDMYAK G+LE A  +F+ ++  ++VSWNA+IA  V +     
Sbjct: 346 YSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETE 405

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +L   M+ S   PN  T  + L ACA M   ++G+Q+H   I+  +  D  +   L+D
Sbjct: 406 AFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALID 465

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG +  AR IF    EK+ +++N +I G+ Q+    E+  LF  M   G+ +D  +
Sbjct: 466 MYSKCGQLSLARNIFE-RSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVS 524

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L +  +       K++H + V+       ++ NSL+D Y K G +  A KIF + +
Sbjct: 525 FMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKIT 584

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ +  +MI  Y   G  + A +L+  M+   ++ D     ++L AC++    ++GK+
Sbjct: 585 KKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKK 644

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
               ++             +V++  + G +        ++P       W A++G    HG
Sbjct: 645 YFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHG 704



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 278/568 (48%), Gaps = 9/568 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           +A +L++ YA   +   +R +    P R  S   WNSL           EA+  +  M+ 
Sbjct: 51  LAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLMLR 110

Query: 90  SGIRPNE--FSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
           S +RP++  F  +    A A +     G ++H  +++ G+ +D+F+ N LV  YA  G  
Sbjct: 111 SAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACGKA 170

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
            DA  VF ++   D+VSWN++++  +++     A +    M  S    N+ +  S + AC
Sbjct: 171 CDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPAC 230

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
              + ++ G  +H   +K+ + +   +   LVDMY K G ++ +  +F  M E+N ++WN
Sbjct: 231 GTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWN 290

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
             I   L  G   +   +F  M    V     TLS++L ++    +  + ++VH  S+K 
Sbjct: 291 SAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKR 350

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           A + D ++ NSL+D Y K G +E A  IF++    ++V+  +MI    Q G   EA +L 
Sbjct: 351 AMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLV 410

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            +MQ     P+S    ++L ACA +++ + GKQ+H   I+ G M D F  N+L++MY+KC
Sbjct: 411 TDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKC 470

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G +  A   F E  ++  VS++ +I G +Q     E+L +F QM   G+  + ++ +  L
Sbjct: 471 GQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGAL 529

Query: 508 CACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
            AC +  +    K  H   + +     P   +   ++D+  + G    A ++ + +  + 
Sbjct: 530 SACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKITKKD 587

Query: 567 NASVWGALLGAARIYKNVEVGQHAAEML 594
            AS W  ++    ++  +++     E++
Sbjct: 588 VAS-WNTMILGYGMHGQIDIAFELFELM 614



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 257/568 (45%), Gaps = 51/568 (8%)

Query: 116 RKIHGYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP----DIVSWNAVIA 170
           R+ H  S+  G   + +  A AL+  YA + +L  A  V +   HP        WN++  
Sbjct: 33  RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLR--HHPLRLRSAFLWNSLSR 90

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPN--MFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
                     AL+++  M  S + P+   F +     A A    ++ G +LH S ++   
Sbjct: 91  ALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGH 150

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            +D   G  LV  YA CG   +AR +F  MPE+++++WN ++S  L NG   +A      
Sbjct: 151 LADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVS 210

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M R G   +  +L +V+ +  + Q       +HAL+VK    +   + N+L+D YGK G 
Sbjct: 211 MMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGD 270

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           VE ++++F      + V+  S I  +   G   + L+++ +M +  + P S   SSLL A
Sbjct: 271 VEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPA 330

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
              L +++ G++VH + IK     D F  NSLV+MYAK GS++ A   F ++ DR +VSW
Sbjct: 331 LVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSW 390

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESME 527
           +AMI  L Q+G   EA ++   M + G  PN ITLV+VL AC     +   K  H  S+ 
Sbjct: 391 NAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIR 450

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELV----------DTMPFQANASVWG----- 572
           +         +   +ID+  + G+   A  +           +T+    + S W      
Sbjct: 451 RGLMFDLFISN--ALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESLL 508

Query: 573 ---------------ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN----IYA 613
                          + +GA     N+ V +H  E+   +     S H  LSN    +Y 
Sbjct: 509 LFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYT 568

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
             GM    +K+      NK+ K+   SW
Sbjct: 569 KGGMLVTASKIF-----NKITKKDVASW 591


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/657 (39%), Positives = 392/657 (59%), Gaps = 19/657 (2%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++FS N +V  YAK   +  A  +F +   PD VS+N +I+G         A+ LF++
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+      + FT +  + AC   +  +L +QLHC  +     S   V    V  Y+K G 
Sbjct: 131 MRELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGL 188

Query: 248 MDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           + EA  +F+ M   ++ ++WN +I  + Q+    +A +L+  M  +G   D  TL++VL 
Sbjct: 189 LREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH---VEDAVKIFKESSAVD 363
           ++ S   +   +Q H   +K  F  + ++ + LID Y KCG    + D+ K+F+E  + D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPD 308

Query: 364 LVACTSMITAYA-QFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQ 420
           LV   +MI+ Y+      EEA+K + +MQ     PD  SFVC  + +AC+NLS+  QGKQ
Sbjct: 309 LVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVC--VTSACSNLSSPSQGKQ 366

Query: 421 VHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +H   IK    S+  +  N+L+++Y K G++ DA R F  +P+   VS++ MI G AQHG
Sbjct: 367 IHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHG 426

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G EAL+++ +ML+ G+ PN+IT V++L AC H G V E + +F +M++ F I+P  EHY
Sbjct: 427 HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           +CMID+LGRAGK +EA   +D MP++  +  W ALLGA R +KN+ + + AA+ L  ++P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQP 546

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             ++ +V+L+N+YA AG W+ +A VR+ M+  +++K+PG SWIEVK K + F   D SH 
Sbjct: 547 LAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606

Query: 660 RSKEIYAKLDEVSDLLNKAGYV-----PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
             +E+   L+E+   + K GYV      MV+ D     E E+E  L HHSEKLAVAFGL+
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDE--AGEGEEEMRLGHHSEKLAVAFGLM 664

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T  G  I V KNLRIC DCH + +F+S +  REIIVRD  RFH F++G CSCG YW
Sbjct: 665 STRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 258/523 (49%), Gaps = 53/523 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           +L    +++DLF G  +H + V +   S  +++N  V +Y+KCG                
Sbjct: 14  LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN 73

Query: 45  ----NFI------DS-----RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
               N I      DS     R+LFD  P+   VS+N+L S Y        A+  FK M  
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRE 133

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G   + F+LS +I AC    D  L +++H +++  G+DS     NA V  Y+K G L +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVD--LIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLRE 191

Query: 150 AVAVFKDIEH-PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           AV+VF  ++   D VSWN++I     H+    AL L+++M       +MFT  S L A  
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG---SMDEARMIFHLMPEKNLIA 265
            ++    GRQ H  LIK     +  VG GL+D Y+KCG    M ++  +F  +   +L+ 
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVL 311

Query: 266 WNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           WN +ISG+  N     EA   F  M R G   D  +   V  + ++  +    KQ+H L+
Sbjct: 312 WNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLA 371

Query: 325 VKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           +K+   S+   V N+LI  Y K G++ DA ++F     ++ V+   MI  YAQ G G EA
Sbjct: 372 IKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA------- 436
           L+LY  M D  I P++    ++L+ACA+    ++G++       F  M +TF        
Sbjct: 432 LRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKY------FNTMKETFKIEPEAEH 485

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
            + ++++  + G +++A+R    +P + G V+W+A++G   +H
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 204/411 (49%), Gaps = 19/411 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           ++ AC  + DL    Q+H   V  GFDS   V N+ V  Y+K G   ++  +F  +   R
Sbjct: 146 LIAACCDRVDLIK--QLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLR 203

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSWNS+   Y       +A+  +KEM+  G + + F+L+S++NA       + GR+ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVG---NLEDAVAVFKDIEHPDIVSWNAVIAGCVLH- 175
           G  IK G+  +    + L+D Y+K G    + D+  VF++I  PD+V WN +I+G  ++ 
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNE 323

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-V 234
           EH++ A+K F+QM+     P+  ++     AC+ +     G+Q+H   IK  I S+ I V
Sbjct: 324 EHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISV 383

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ +Y K G++ +AR +F  MPE N +++N +I G+ Q+G   EA  L+  M   G+
Sbjct: 384 NNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGI 443

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF----ESDDYIVNSLIDAYGKCGHVE 350
             +  T   +L + A    +    Q +  ++K  F    E++ Y  + +ID  G+ G +E
Sbjct: 444 APNNITFVAILSACAHCGKVDE-GQKYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKLE 500

Query: 351 DAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +A +       +  +V   A       +    L E A K  + MQ     P
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATP 551



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 19/252 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V  AC++      G Q+HG+ + +   S+   V N+L+ +Y K GN +D+RR+FD +PE 
Sbjct: 351 VTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPEL 410

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           + VS+N +   Y       EA+  ++ M+ SGI PN  +  ++++ACA  G    G+K  
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYF 470

Query: 120 GY---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLH 175
                + K+  +++ +S   ++D+  + G LE+A      + + P  V+W A++  C  H
Sbjct: 471 NTMKETFKIEPEAEHYS--CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528

Query: 176 EH---NDWALKLFQQMKSSEINP-----NMFTYTSALKACA----GMELKELGRQLHCSL 223
           ++    + A K    M+     P     NM+      +  A     M  K + ++  CS 
Sbjct: 529 KNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSW 588

Query: 224 IKMEIKSDPIVG 235
           I+++ K    V 
Sbjct: 589 IEVKKKKHVFVA 600



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%)

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GK +H   +K    S T+  N  VN+Y+KCG +  A  AF    +  + S++ ++   A+
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAK 86

Query: 478 HGRGKEALQMFGQ 490
             +   A Q+F +
Sbjct: 87  DSKIHIARQLFDE 99


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 370/675 (54%), Gaps = 67/675 (9%)

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV-------------------- 168
           +D F  N L+ +YAK G L DA  +F  +   D  SWNA+                    
Sbjct: 56  TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRM 115

Query: 169 -----------IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
                      IAG   +     +L+LF++M+     P  +T  S L A A +     G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGK 175

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+H S+I      +  +   L DMYAKCG +++AR +F  + +KNL++WN++ISG+ +NG
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              +   L   M   G   DQ T+ST+                                 
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTI--------------------------------- 262

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
             I AY +CG V++A ++F E    D+V  T+M+  YA+ G  E+AL L+ EM    I P
Sbjct: 263 --IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEP 320

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           DS+  SS++++CA L++   G+ VH   I  G  ++    ++L++MY+KCG IDDA   F
Sbjct: 321 DSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
           + +P R +VSW+AMI G AQ+G  K+AL++F  ML+    P+++T + +L AC H   + 
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           + + +F+S+  + G+ P  +HYACM+++LGR G+ ++A+ L+  M    +  +W  LL  
Sbjct: 441 QGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
                ++   + AA  LF ++P  +  +++LSN+YAS G W +VA VR  MK   +KK  
Sbjct: 501 CSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFA 560

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G SWIE+ ++V+ FT  DR+H  S++IY KL+ +   L + G+ P     LHDV E EK 
Sbjct: 561 GFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKF 620

Query: 698 QLLYHHSEKLAVAFGLIATPPG-ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           + +  HSEKLA+AFGLI  P G + IR+ KN+RIC DCH   +F S+I+ R+II+RD NR
Sbjct: 621 KSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNR 680

Query: 757 FHHFRNGSCSCGGYW 771
           FHHF  G CSC   W
Sbjct: 681 FHHFSTGKCSCNDNW 695



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 235/500 (47%), Gaps = 72/500 (14%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D F  N+L+  YAK G+  + +  FD +P R  VS+N+  + +      +E++  FK M 
Sbjct: 88  DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G  P E+++ S++NA A   D   G++IHG  I   +  ++F  NAL DMYAK G +E
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F  +   ++VSWN +I+G   +   +  + L  QM+ S   P+  T ++ + A  
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
                                            Y +CG +DEAR +F    EK+++ W  
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTA 292

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           ++ G+ +NG + +A  LF  M  E +  D  TLS+V+ S A   ++   + VH  S+   
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             ++  + ++LID Y KCG ++DA  +F      ++V+  +MI   AQ G  ++AL+L+ 
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFE 412

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
            M  ++  PD+     +L+AC + +  EQG++                 +S+ N +    
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYF---------------DSISNQHGMTP 457

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           ++D                ++ M+  L + GR ++A+ +   M  D   P+ +   ++L 
Sbjct: 458 TLD---------------HYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLS 499

Query: 509 ACNHAGLVAE----AKHHFE 524
            C+  G +      A+H FE
Sbjct: 500 ICSTKGDIVNAEVAARHLFE 519



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 205/454 (45%), Gaps = 73/454 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L A     DL  G Q+HG ++   F  + F+ N+L  MYAKCG    +R LFD + +++
Sbjct: 161 ILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKN 220

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN + S Y      E+ +    +M LSG  P++ ++S++I A               
Sbjct: 221 LVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------- 265

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y + G +++A  VF + +  DIV W A++ G   +   + 
Sbjct: 266 --------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREED 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M    I P+ +T +S + +CA +     G+ +H   I   + ++ +V   L+D
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG +D+AR +F+LMP +N+++WN +I G  QNG D +A  LF  M ++    D  T
Sbjct: 366 MYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L +            +H   ++   E  D I N     +G              + 
Sbjct: 426 FIGILSAC-----------LHCNWIEQGQEYFDSISNQ----HGM-------------TP 457

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            +D  AC  M+    + G  E+A+ L   M     +PD  + S+LL+ C+        + 
Sbjct: 458 TLDHYAC--MVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKGDIVNAEV 512

Query: 421 VHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDD 452
              H+ +   +  T A     L NMYA  G   D
Sbjct: 513 AARHLFE---LDPTIAVPYIMLSNMYASMGRWKD 543



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 32/139 (23%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
           + L+  C   +   Q K++  H+    F  +D+F  N L+++YAK G + DA   F ++ 
Sbjct: 26  TQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKML 85

Query: 462 DRGIVSWSAMIGGLAQHGR-------------------------------GKEALQMFGQ 490
            R   SW+A++   A+ G                                 +E+L++F +
Sbjct: 86  KRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKR 145

Query: 491 MLEDGVLPNHITLVSVLCA 509
           M  +G  P   T+VS+L A
Sbjct: 146 MQREGFEPTEYTIVSILNA 164


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/696 (36%), Positives = 394/696 (56%), Gaps = 39/696 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            + C   + +     +H  ++ +GF +  F+ N+++ +Y+KC + ID+R +FD +P R++
Sbjct: 10  FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VSW ++ S   +     EA+  + EM+ S I +PN+F  S+++ AC    +  LG+ +H 
Sbjct: 70  VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHY 129

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE---------------------- 158
           +  +   D D+   NAL+DMY K G+L DA  VF +I                       
Sbjct: 130 HIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDD 189

Query: 159 ---------HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
                     PDIVSWN++IAG V    +  AL+    M    +  + FT+ S LKAC  
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLV-DNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGC 248

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF-----HLMPEKNLI 264
            +   LGR++HC +IK   +S       L+DMY+ C  + EA  IF     +    ++L 
Sbjct: 249 SDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLA 308

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
            WN ++SGH+ NG  +EA S+   M+R GV FD  T S VLK   +F  + +  QVH   
Sbjct: 309 LWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV 368

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           + + +E D  + + LID Y K G + +A+++F+     D+VA +S+IT  A+FG  + A 
Sbjct: 369 ITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAF 428

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L+++M    +  D FV S +L AC++L++++ GKQVH   +K G+ S+     +L++MY
Sbjct: 429 SLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMY 488

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           AKCG I+DA   F  + +   +SW+++I G AQ+GR +EA+ +  +M+E G  PN IT++
Sbjct: 489 AKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITIL 548

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
            VL AC H+GLV EA   F S+E   G+ P  EHY CM+DILG+AG+F+EA++L+  MPF
Sbjct: 549 GVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPF 608

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
           + + ++W +LLGA   YKN ++    AE L A  PE  S +++LSN+YA+ GMWD+V+KV
Sbjct: 609 KPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKV 668

Query: 625 RRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           R  +K    KK  G  + E+  K Y        HA+
Sbjct: 669 RETVKKIG-KKRAGKIFYEIPFKFYFMEHLHLGHAK 703



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 267/517 (51%), Gaps = 41/517 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC   +++ LG  VH  +     D D  + N+L+ MY KCG+  D++R+F  IP ++
Sbjct: 111 VLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKN 170

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM----VLS-------------------------- 90
             SWN+L   Y     +++A+  F +M    ++S                          
Sbjct: 171 ATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGK 230

Query: 91  GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
           G++ +EF+  S++ AC  S + +LGR+IH Y IK G++S  +  +AL+DMY+    L +A
Sbjct: 231 GLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEA 290

Query: 151 VAVFKDIEHPDIVS-----WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
             +F        VS     WN++++G V++     AL +   M  S +  + +T++  LK
Sbjct: 291 TKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLK 350

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
            C   +   L  Q+H  +I    + D +VG  L+D+YAK GS++ A  +F  +P+K+++A
Sbjct: 351 ICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVA 410

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W+ +I+G  + G D  A SLF  M   G+  D   +S VLK+ +S  +    KQVH+L +
Sbjct: 411 WSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCL 470

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K  +ES+  +  +LID Y KCG +EDA+ +F   S +D ++ TS+I   AQ G  EEA+ 
Sbjct: 471 KKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAIS 530

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMY 444
           L  +M +    P+      +L AC +    E+   V   I    G +      N +V++ 
Sbjct: 531 LLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDIL 590

Query: 445 AKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQH 478
            + G  ++A +  SE+   PD+ I  WS+++G    +
Sbjct: 591 GQAGRFEEAVKLISEMPFKPDKTI--WSSLLGACGTY 625



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 223/473 (47%), Gaps = 47/473 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC    +L LG ++H  ++ +GF+S  +  ++L+ MY+ C    ++ ++FD     S
Sbjct: 242 VLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNS 301

Query: 61  VVS-----WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
            VS     WNS+ S +V      EA+     M  SG+R + ++ S ++  C    +  L 
Sbjct: 302 SVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLA 361

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            ++HG+ I  GY+ D    + L+D+YAK G++ +A+ +F+ +   D+V+W+++I GC   
Sbjct: 362 SQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARF 421

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             +  A  LF  M    +  + F  +  LKAC+ +   + G+Q+H   +K   +S+ +V 
Sbjct: 422 GSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVT 481

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+DMYAKCG +++A  +F  + E + ++W  +I G  QNG   EA SL   M   G  
Sbjct: 482 TALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTK 541

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            ++ T+  VL +         C+  H+  V+ A++    + NS+   +G           
Sbjct: 542 PNKITILGVLTA---------CR--HSGLVEEAWD----VFNSIETNHG----------- 575

Query: 356 FKESSAVDLVAC----TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
                   L+ C      M+    Q G  EEA+KL  EM      PD  + SSLL AC  
Sbjct: 576 --------LIPCPEHYNCMVDILGQAGRFEEAVKLISEM---PFKPDKTIWSSLLGACGT 624

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
               +    V  H++      D      L N+YA  G  D   +    +   G
Sbjct: 625 YKNRDLANIVAEHLLATS-PEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIG 676



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 41/415 (9%)

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
           A + C      +  + LH  +IK    +   +   ++ +Y+KC S+ +AR +F  MP +N
Sbjct: 9   AFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRN 68

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASFQAIGVCKQVH 321
           +++W  ++S    +    EA SL+  M    +   +Q   S VLK+    + + + K VH
Sbjct: 69  IVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVH 128

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
               +   + D  ++N+L+D Y KCG + DA ++F E    +  +  ++I  YA+ GL +
Sbjct: 129 YHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLID 188

Query: 382 EALKLYLEMQDREI------------------------------NPDSFVCSSLLNACAN 411
           +A+KL+ +M + +I                                D F   S+L AC  
Sbjct: 189 DAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGC 248

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS---- 467
                 G+++H +IIK GF S  +  ++L++MY+ C  + +A + F +      VS    
Sbjct: 249 SDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLA 308

Query: 468 -WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFES 525
            W++M+ G   +G   EAL M   M   GV  +  T   VL  C N   L   ++ H   
Sbjct: 309 LWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV 368

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
           +   + +  +    + +IDI  + G    A+ L + +P   +   W +L+ G AR
Sbjct: 369 ITSGYELDCVVG--SILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGCAR 420



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 13/293 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+S      G QVH + +  G++S+  V  +L+ MYAKCG+  D+  LF  + E  
Sbjct: 449 VLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEID 508

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
            +SW S+          EEA+    +M+ SG +PN+ ++  ++ AC  SG       + +
Sbjct: 509 TMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFN 568

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
                 G        N +VD+  + G  E+AV +  ++   PD   W++++  C  +++ 
Sbjct: 569 SIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNR 628

Query: 179 DWALKLFQQM-KSSEINPNMFTYTSALKACAGM---------ELKELGRQLHCSLIKMEI 228
           D A  + + +  +S  + +++   S + A  GM          +K++G++     I  EI
Sbjct: 629 DLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKK-RAGKIFYEI 687

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
                    L   +AK G       + + + E +L++WN VI+G   N    E
Sbjct: 688 PFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNASPYE 740


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/687 (35%), Positives = 394/687 (57%), Gaps = 10/687 (1%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVA------NSLVVMYAKCGNFIDSRRLFDAIPE 58
           C+  + L  G  VH  ++ +    D F+A      N L+ MY +CG    +R +FD + +
Sbjct: 52  CSRLRSLPQGRLVHRHLLASS-ARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLD 110

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+ VSW ++ + +       +A+  F  M+ SG  P++F+L S I AC+  GD  LGR++
Sbjct: 111 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  +IK    SD+   NALV MY+K G++ D  A+F+ I   D++SW ++IAG       
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230

Query: 179 DWALKLFQQMKSSEIN-PNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGV 236
             AL++F++M +  ++ PN F + S  +AC+ +    E G Q+H   +K ++  +   G 
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGC 290

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L DMYA+C  +D AR +F+ +   +L++WN +I+     G   EA  LF  M   G+  
Sbjct: 291 SLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP 350

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D  T+  +L +   + A+   + +H+  VK     D  + NSL+  Y +C     A+ +F
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVF 410

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E+   D+V   S++TA  Q    E+  KL+  +     + D    +++L+A A L  +E
Sbjct: 411 HETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFE 470

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAMIGGL 475
             KQVH +  K G + D    N L++ YAKCGS+DDA++ F  +   R + SWS++I G 
Sbjct: 471 MVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 530

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQ G  KEAL +F +M   GV PNH+T V VL AC+  GLV E  +++  M+ ++GI P 
Sbjct: 531 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPT 590

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
           +EH +C++D+L RAG+  EA + VD MPF+ +  +W  LL A+R + +V++G+ AAE + 
Sbjct: 591 REHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVL 650

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            I+P  S+ +VLL NIYAS+G W+  A++++ M+ + ++K PG SWI++K ++  F V D
Sbjct: 651 NIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVED 710

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVP 682
           RSH  S EIY  L+ +   + KAGY+P
Sbjct: 711 RSHPESDEIYTMLEVIGLEMVKAGYIP 737


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/689 (35%), Positives = 388/689 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC   K + +G  VH  V   G   D FV +SL+ +YA+ G+  D++ LFD IP++ 
Sbjct: 64  VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKD 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN + + YV       A+  F EM  S I+PN  + + +++ CA      LG ++HG
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G + D   AN L+ MY+K   L+ A  +F      D+VSWN +I+G V +     
Sbjct: 184 IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGE 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF+ M S+ I P+  T+ S L     +   +  +++H  +I+  +  D  +   L+D
Sbjct: 244 AEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALID 303

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC  ++ A+ I       + +    +ISG++ NG + EA   F W+ +E +     T
Sbjct: 304 IYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVT 363

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S++  + A   A+ + K++H   +KT  +   ++ ++++D Y KCG ++ A ++F   +
Sbjct: 364 FSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT 423

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D +   SMIT+ +Q G   EA+ L+ +M       D    S  L+ACANL A   GK+
Sbjct: 424 EKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKE 483

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK    SD +A +SL++MYAKCG+++ + R F  + +R  VSW+++I     HG 
Sbjct: 484 IHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGD 543

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE L +F +ML +G+ P+H+T + ++ AC HAG V E   ++  M +++GI    EHYA
Sbjct: 544 LKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYA 603

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C+ D+ GRAG+  EA E +++MPF  +A VWG LLGA  I+ NVE+ + A++ LF ++P 
Sbjct: 604 CVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPL 663

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VLL+N+ A AG W  V KVR  MK+  ++K PG SWIEV +  + F   D SH  
Sbjct: 664 NSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPL 723

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           + +IY+ LD +   L K GYVP +   +H
Sbjct: 724 TAQIYSVLDSLLLELKKEGYVPQLYLPMH 752



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 288/542 (53%), Gaps = 8/542 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY + G+  D++ LF  +      +WN +   +        A+ F+ +M+ +G+ P++++
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
              ++ AC G     +G+ +H     +G   D+F  ++L+ +YA+ G+L DA  +F +I 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             D V WN ++ G V +  +  A+K+F +M+ SEI PN  T+   L  CA   + +LG Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           LH   +   ++ D  V   L+ MY+KC  +  AR +F   P+ +L++WN +ISG++QNG 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             EA  LF  M   G+  D  T ++ L  V    ++  CK++H   ++ A   D ++ ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           LID Y KC  VE A KI  +SS+ D V CT+MI+ Y   G  +EAL+ +  +    + P 
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           S   SS+  A A L+A   GK++H  IIK         G+++++MYAKCG +D A R F+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            I ++  + W++MI   +Q+GR  EA+ +F QM  +G   + +++   L AC +      
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACAN----LP 476

Query: 519 AKHHFESMEKKFGIQPMQ-EHYA--CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           A H+ + +       P++ + YA   +ID+  + G    +  + D M  + N   W +++
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNSII 535

Query: 576 GA 577
            A
Sbjct: 536 SA 537


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/576 (42%), Positives = 348/576 (60%), Gaps = 12/576 (2%)

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           FT+T +L+          G QLH  +IK+  ++ P+V   L++ Y+K      +  +F  
Sbjct: 17  FTHTRSLRK---------GLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDS 67

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
            P K+   W+ VIS   QN   + A   F  M R G+  D  TL T  KSVA+  ++ + 
Sbjct: 68  FPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLA 127

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
             +HALS+KTA   D ++ +SL+D Y KCG V  A K+F E    ++V+ + MI  Y+Q 
Sbjct: 128 LSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQM 187

Query: 378 GLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           GL EEAL L+     QD +I  + F  SS+L  C+  + +E GKQVH    K  F S  F
Sbjct: 188 GLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCF 247

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
             +SL+++Y+KCG ++   + F E+  R +  W+AM+   AQH       ++F +M   G
Sbjct: 248 VASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVG 307

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V PN IT + +L AC+HAGLV + +H F  M K+ GI+P  +HYA ++D+LGRAGK +EA
Sbjct: 308 VKPNFITFLCLLYACSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEA 366

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
           + ++  MP Q   SVWGALL   RI+ N E+    A+ +F +    S   VLLSN YA+A
Sbjct: 367 VLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAA 426

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
           G W+  A+ R+ M+D  +KKE G+SW+E  ++V+TF  GDRSH +++EIY KL+E+ + +
Sbjct: 427 GRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEM 486

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            KAGYV      L +V+  EK Q + +HSE+LA+AFGLI  PP   IRV KNLR+C DCH
Sbjct: 487 AKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCH 546

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+ +FISK   R IIVRD NRFH F +G C+CG YW
Sbjct: 547 TAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 238/547 (43%), Gaps = 50/547 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL   T  + L  GLQ+HG V+  GF++   V + L+  Y+K      S +LFD+ P +S
Sbjct: 13  VLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKS 72

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W+S+ S +   D    A+ FF+ M+  G+ P++ +L +   + A      L   +H 
Sbjct: 73  ATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHA 132

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K  +  D+F  ++LVD YAK G++  A  VF ++ H ++VSW+ +I G      ++ 
Sbjct: 133 LSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEE 192

Query: 181 ALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           AL LF++   +  +I  N FT +S L+ C+   L ELG+Q+H    K    S   V   L
Sbjct: 193 ALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSL 252

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           + +Y+KCG ++    +F  +  +NL  WN ++    Q+        LF  M R GV  + 
Sbjct: 253 ISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNF 312

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   +L + +    +   +    L  +   E       +L+D  G+ G +E+AV + KE
Sbjct: 313 ITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKE 372

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                                        + MQ     P   V  +LL  C      E  
Sbjct: 373 -----------------------------MPMQ-----PTESVWGALLTGCRIHGNTELA 398

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW----- 468
             V   + + G +S       L N YA  G  ++A RA   + D+GI     +SW     
Sbjct: 399 SFVADKVFEMGAVSSGIQ-VLLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGN 457

Query: 469 --SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS-VLCACNHAGLVAEAKHHFES 525
                  G   HG+ +E  +   ++ E+     ++   S VL   +        ++H E 
Sbjct: 458 RVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSER 517

Query: 526 MEKKFGI 532
           +   FG+
Sbjct: 518 LAIAFGL 524


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 362/597 (60%), Gaps = 8/597 (1%)

Query: 183 KLFQQMK--SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           KL Q ++  S E +P+  TY   +  C        G ++H  ++      DP +   L+ 
Sbjct: 61  KLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIG 120

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+  GS+D AR +F    ++ +  WN +       G   E   L+  M R GV  D+ T
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180

Query: 301 LSTVLKSVASFQA----IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            + VLK+  + +     +   K++HA   +  + S  YI+ +L+D Y + G V+ A  +F
Sbjct: 181 YTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSA 414
                 ++V+ ++MI  YA+ G   EAL+ + EM  + ++ +P+S    S+L ACA+L+A
Sbjct: 241 NGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAA 300

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            EQG+ +H +I++ G  S     ++LV MY +CG +D   R F  + DR +VSW+++I  
Sbjct: 301 LEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISS 360

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG G++A+Q+F +ML +G  P  +T VSVL AC+H GLV E K  FESM +  GI+P
Sbjct: 361 YGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKP 420

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHYACM+D+LGRA +  EA ++V  M  +    VWG+LLG+ RI+ NVE+ + A+  L
Sbjct: 421 QVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           FA+EP+ +  +VLL++IYA A MWD V +V++ ++   L+K PG  W+EV+ K+Y+F   
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSM 540

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D  +   ++I+A L ++++ + + GY+P  +  L+++E  EKE+++  HSEKLA+AFGLI
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T  G  IR+ KNLR+C DCH   +FISK + +EI+VRDVNRFH F+NG CSCG YW
Sbjct: 601 NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 193/394 (48%), Gaps = 8/394 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P++ +   +I  C        G ++H + +  G D D F A  L+ MY+ +G+++ A  V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F       I  WNA+     L  H +  L L+ +M    +  + FTYT  LKAC   E  
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 214 ----ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
                 G+++H  L +    S   +   LVDMYA+ G +D A  +F+ MP +N+++W+ +
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAM 254

Query: 270 ISGHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           I+ + +NG   EA   F  M  E      +  T+ +VL++ AS  A+   + +H   ++ 
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR 314

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +S   ++++L+  YG+CG ++   ++F      D+V+  S+I++Y   G G +A++++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIF 374

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAK 446
            EM     +P      S+L AC++    E+GK++   + +  G          +V++  +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGR 434

Query: 447 CGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHG 479
              +D+A +   ++  + G   W +++G    HG
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 221/472 (46%), Gaps = 50/472 (10%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C  +  L  GL+VH  ++  G D D F+A  L+ MY+  G+   +R++FD   +R++  W
Sbjct: 87  CGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146

Query: 65  NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS---GDSLL-GRKIHG 120
           N+LF         EE +  + +M   G+  + F+ + ++ AC  S    D L  G++IH 
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHA 206

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  + GY+S ++    LVDMYA+ G ++ A  VF  +   ++VSW+A+IA    +     
Sbjct: 207 HLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFE 266

Query: 181 ALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           AL+ F++M  ++ + +PN  T  S L+ACA +   E GR +H  +++  + S   V   L
Sbjct: 267 ALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISAL 326

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V MY +CG +D  + +F  M ++++++WN +IS +  +G   +A  +F  M   G     
Sbjct: 327 VTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTP 386

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T  +VL         G C      S +   E    +  S+   +G    VE        
Sbjct: 387 VTFVSVL---------GAC------SHEGLVEEGKRLFESMWRDHGIKPQVEHY------ 425

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC---ANLSAY 415
           +  VDL+   + +         +EA K+   +QD    P   V  SLL +C    N+   
Sbjct: 426 ACMVDLLGRANRL---------DEAAKM---VQDMRTEPGPKVWGSLLGSCRIHGNVELA 473

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           E+  +      +   +    AGN   L ++YA+    D+  R    +  RG+
Sbjct: 474 ERASR------RLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 155/291 (53%), Gaps = 9/291 (3%)

Query: 1   VLKACTSKK----DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VLKAC + +     L  G ++H  +   G++S  ++  +LV MYA+ G    +  +F+ +
Sbjct: 184 VLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGM 243

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLL 114
           P R+VVSW+++ +CY       EA+  F+EM+       PN  ++ S++ ACA       
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQ 303

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           GR IHGY ++ G DS +   +ALV MY + G L+    VF  +   D+VSWN++I+   +
Sbjct: 304 GRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGV 363

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
           H +   A+++F++M ++  +P   T+ S L AC+   L E G++L  S+ +   IK    
Sbjct: 364 HGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVE 423

Query: 234 VGVGLVDMYAKCGSMDE-ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
               +VD+  +   +DE A+M+  +  E     W  ++ G  +  G++E A
Sbjct: 424 HYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCRIHGNVELA 473



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 5/241 (2%)

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E  LK  L +  +E +P       L+  C + S+   G +VH HI+  G   D F    L
Sbjct: 59  EGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKL 118

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           + MY+  GS+D A + F +   R I  W+A+   L   G G+E L ++ +M   GV  + 
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM---IDILGRAGKFQEAME 557
            T   VL AC  +   A+     + +      +    H   M   +D+  R G    A  
Sbjct: 179 FTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASY 238

Query: 558 LVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
           + + MP + N   W A++   A+  K  E  +   EM+   +    ++  ++S + A A 
Sbjct: 239 VFNGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACAS 297

Query: 617 M 617
           +
Sbjct: 298 L 298


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/684 (36%), Positives = 388/684 (56%), Gaps = 17/684 (2%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD--MFSANALVDMYAKVGNLEDAVAVFK 155
           + +++  ACA       G+ +H +      +SD  +F  N +V+MYAK G+L+ A  +F 
Sbjct: 65  TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFD 124

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
           ++   +IVSW A+++G   H  ++   ++F+ M      P  F + S + AC G +    
Sbjct: 125 EMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QPTEFAFASVISACGGDD--NC 181

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAK-CGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           GRQ+H   +K    S   VG  L+ MY K CG  DEA  ++  M  +NL++WN +I+G  
Sbjct: 182 GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQ 241

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF-QAIGVCKQVHALSVKTAFESDD 333
             G    A  LF  M+  G+ FD+ TL ++   +      +  C Q+  L++KT F    
Sbjct: 242 VCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKI 301

Query: 334 YIVNSLIDAYGKCG-HVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            +  +L+ AY   G  V D  +IF E     D+V+ T +I A+A+    ++AL ++ +  
Sbjct: 302 EVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFL 360

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
              + PD  + S +L ACA L+       V  H++K GF  D    N+L++  A+CGS+ 
Sbjct: 361 RECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVA 420

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            + + F ++  R  VSW++M+   A HG+GKEAL +F QM      P+  T V++L AC+
Sbjct: 421 LSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACS 477

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           HAG+  E    FE+M    GI P  +HYACM+DILGRAG+  EA EL+D MP + ++ VW
Sbjct: 478 HAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVW 537

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
            ALLG+ R +   ++ + AA  L  ++P  S  +VL+SNI+ + G ++    +RR M+  
Sbjct: 538 SALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGK 597

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
            ++KEPG+SWIEV ++V+ F  G + H   + I A+L+E+   L   GYVP +   LHD+
Sbjct: 598 IVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDI 657

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATP----PGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           E+  KE+ LY+HSEKLA+AF L+        G TI++ KN+RICVDCH   +  S++V  
Sbjct: 658 EDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDM 717

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
           EI+VRD NRFHHF+   CSC  YW
Sbjct: 718 EIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 250/497 (50%), Gaps = 25/497 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSD--EFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           + +AC  +  L  G  +H  +     +SD   F+ N +V MYAKCG+   + ++FD +PE
Sbjct: 69  LFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPE 128

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           +++VSW +L S Y       E    F+ M++   +P EF+ +S+I+AC   GD   GR++
Sbjct: 129 KNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QPTEFAFASVISACG--GDDNCGRQV 185

Query: 119 HGYSIKLGYDSDMFSANALVDMYAK-VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           H  ++K  +DS ++  NAL+ MY K  G  ++A  V++ +   ++VSWN++IAG  +   
Sbjct: 186 HALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGC 245

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSDPIVGV 236
            + AL+LF QM    I  +  T  S      GM +  E   QL C  IK        V  
Sbjct: 246 GNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVAT 305

Query: 237 GLVDMYAKCGS--MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
            LV  Y+  G    D  R+   L   +++++W  +I+   +     +A  +F    RE +
Sbjct: 306 ALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERDPK-KALVIFRQFLRECL 364

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSV-----KTAFESDDYIVNSLIDAYGKCGHV 349
             D+   S VLK+ A     G+  + HAL+V     K  FE D  + N+LI A  +CG V
Sbjct: 365 APDRHMFSIVLKACA-----GLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSV 419

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
             + ++F +  + D V+  SM+ AYA  G G+EAL L+ +M   +  PD     +LL+AC
Sbjct: 420 ALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSAC 476

Query: 410 ANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVS 467
           ++    E+G ++   +    G +        +V++  + G I +A     ++P +   V 
Sbjct: 477 SHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVV 536

Query: 468 WSAMIGGLAQHGRGKEA 484
           WSA++G   +HG  K A
Sbjct: 537 WSALLGSCRKHGETKLA 553



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 9/275 (3%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLFDAIPERS-VVSWNSLFSCYV 72
            Q+  + + TGF     VA +LV  Y+  G  + D  R+F  +  R  VVSW  + + + 
Sbjct: 286 FQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFA 345

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
             D  ++A+  F++ +   + P+    S ++ ACAG         +  + +K+G++ D+ 
Sbjct: 346 ERD-PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIV 404

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
            ANAL+   A+ G++  +  VF  +   D VSWN+++    +H     AL LF QM +  
Sbjct: 405 LANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA-- 462

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEA 251
             P+  T+ + L AC+   + E G ++  ++     I         +VD+  + G + EA
Sbjct: 463 -QPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEA 521

Query: 252 RMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASL 285
           + +   MP E + + W+ ++ G  +  G+ + A L
Sbjct: 522 KELIDKMPMEPDSVVWSALL-GSCRKHGETKLAKL 555



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 19/204 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC         L V   V+  GF+ D  +AN+L+   A+CG+   S+++FD +  R 
Sbjct: 374 VLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRD 433

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
            VSWNS+   Y      +EA+  F +M     +P+  +  ++++AC+ +G +  G KI  
Sbjct: 434 TVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFE 490

Query: 119 -----HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
                HG   +L + + M      VD+  + G + +A  +   +   PD V W+A++  C
Sbjct: 491 TMSNNHGIVPQLDHYACM------VDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSC 544

Query: 173 VLHEHNDWALKLFQQMKSSEINPN 196
              +H +  L     +K  E++PN
Sbjct: 545 --RKHGETKLAKLAAVKLKELDPN 566


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/587 (39%), Positives = 352/587 (59%), Gaps = 8/587 (1%)

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
           E NP   T+   + +CA       G  +H  L+      DP +   L++MY + GS+D A
Sbjct: 73  EPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRA 132

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +F    E+ +  WN +       G   E   L+  M   G   D+ T + VLK+    
Sbjct: 133 LKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACV-V 191

Query: 312 QAIGVC-----KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
             + VC     K++HA  ++  +E++ +++ +L+D Y K G V  A  +F      + V+
Sbjct: 192 SELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVS 251

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREIN--PDSFVCSSLLNACANLSAYEQGKQVHVH 424
            ++MI  +A+  +  +AL+L+  M     N  P+S    ++L ACA L+A EQGK +H +
Sbjct: 252 WSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGY 311

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           I++    S     N+L+ MY +CG +    R F  +  R +VSW+++I     HG GK+A
Sbjct: 312 ILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKA 371

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           +Q+F  M+  GV P++I+ ++VL AC+HAGLV E K  FESM  K+ I P  EHYACM+D
Sbjct: 372 IQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 431

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGRA +  EA++L++ M F+   +VWG+LLG+ RI+ NVE+ + A+ +LF +EP  +  
Sbjct: 432 LLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGN 491

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           +VLL++IYA A +W     V + ++   L+K PG SWIEVK KVY+F   D  + + +EI
Sbjct: 492 YVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEI 551

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           +A L ++S+ +   GYVP     L+D++E EKE+++  HSEKLAVAFGLI T  G TIR+
Sbjct: 552 HALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRI 611

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +KNLR+C DCH   +FISK  +REI+VRDVNRFHHFR+G CSCG YW
Sbjct: 612 RKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 192/393 (48%), Gaps = 8/393 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P + +   +I +CA       G  +H   +  G+D D F A  L++MY ++G+++ A+ V
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F +     I  WNA+     +  H    L L+ QM       + FTYT  LKAC   EL 
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 214 ----ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
                 G+++H  +++   +++  V   L+D+YAK GS+  A  +F  MP KN ++W+ +
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           I+   +N   M+A  LF  M  E      +  T+  +L++ A   A+   K +H   ++ 
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +S   ++N+LI  YG+CG V    ++F      D+V+  S+I+ Y   G G++A++++
Sbjct: 316 QLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
             M  + ++P      ++L AC++    E+GK +   ++ K+           +V++  +
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435

Query: 447 CGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
              + +A +   ++  + G   W +++G    H
Sbjct: 436 ANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIH 468



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 193/376 (51%), Gaps = 29/376 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ +C  K  L  GL VH  +V +GFD D F+A  L+ MY + G+   + ++FD   ER+
Sbjct: 84  LIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERT 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL----GR 116
           +  WN+LF         +E +  + +M   G   + F+ + ++ AC  S  S+     G+
Sbjct: 144 IYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGK 203

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH + ++ GY++++     L+D+YAK G++  A +VF  +   + VSW+A+IA    +E
Sbjct: 204 EIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNE 263

Query: 177 HNDWALKLFQQMKSSEIN--PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
               AL+LFQ M     N  PN  T  + L+ACAG+   E G+ +H  +++ ++ S   V
Sbjct: 264 MPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPV 323

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY +CG +   + +F  M ++++++WN +IS +  +G   +A  +F  M  +GV
Sbjct: 324 LNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGV 383

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSV---KTAFES--DDYIVNS-------LIDA 342
                +  TVL         G C   HA  V   K  FES    Y ++        ++D 
Sbjct: 384 SPSYISFITVL---------GACS--HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 432

Query: 343 YGKCGHVEDAVKIFKE 358
            G+   + +A+K+ ++
Sbjct: 433 LGRANRLGEAIKLIED 448



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 10/181 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC     L  G  +HG ++    DS   V N+L+ MY +CG  +  +R+FD + +R 
Sbjct: 292 MLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRD 351

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS-----GDSLLG 115
           VVSWNSL S Y    F ++A+  F+ M+  G+ P+  S  +++ AC+ +     G  L  
Sbjct: 352 VVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFE 411

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
             +  Y I  G    M     +VD+  +   L +A+ + +D+   P    W +++  C +
Sbjct: 412 SMLSKYRIHPG----MEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRI 467

Query: 175 H 175
           H
Sbjct: 468 H 468


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/694 (34%), Positives = 383/694 (55%), Gaps = 35/694 (5%)

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           L GR   G S++    +      +++  + +     DA  VF +        W   I+GC
Sbjct: 27  LRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGC 86

Query: 173 VLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
                    ++ F +M    E  PN F   + ++ CAGM   E G+++H  +++  +  D
Sbjct: 87  ARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLD 146

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI----------------------- 268
            ++   ++DMYAKCG  + AR +F  M E++ ++WNI                       
Sbjct: 147 VVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPL 206

Query: 269 --------VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
                   +ISG +++G   +A S    M + GV F+  T ST            + +Q+
Sbjct: 207 RDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQL 266

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL---VACTSMITAYAQF 377
           H   +  A E D ++ +SL+D Y KCG +E A  +F   S +      A ++M+  Y Q 
Sbjct: 267 HGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQN 326

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G  EEAL L+  M    +  D F  +S+  ACAN+   EQG+QVH  + K  +  D    
Sbjct: 327 GREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLA 386

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           +++V+MYAKCG+++DA   F     + I  W++M+   A HG+G+ A+++F +M  + + 
Sbjct: 387 SAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMT 446

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           PN ITLV VL AC+H GLV+E + +F+ M++++GI P  EHY C++D+ GR+G   +A  
Sbjct: 447 PNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKN 506

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            ++       A VW  LL A R++++ E  + A+E L  +E   + ++V+LSNIYA+   
Sbjct: 507 FIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNK 566

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W +  ++R  M++ K++K+PG SWI +K+ V+TF  GD SH +S EIYA L+++ + L +
Sbjct: 567 WHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKE 626

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
            GY    +  +HDVE+ ++E  L  HSEKLA+AFG+I+TP G  +R+ KNLR+C DCH +
Sbjct: 627 IGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEA 686

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            ++IS    REI+VRD+ RFHHF++ SCSC  +W
Sbjct: 687 IKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 237/482 (49%), Gaps = 39/482 (8%)

Query: 35  SLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IR 93
           S++  + +   F D+R +FD  P R+   W    S         + +  F EM+  G   
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           PN F L++++  CAG GD   G+++HG+ ++ G   D+   NA++DMYAK G  E A  V
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRV 169

Query: 154 FKDIEHPDIVSWNAVIAGCV----------------LHEHNDW---------------AL 182
           F  +   D VSWN  I  C+                L +   W               AL
Sbjct: 170 FGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
              ++M  + +  N +TY++A      + L +LGRQLH  ++   ++ D  V   L+DMY
Sbjct: 230 SHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMY 289

Query: 243 AKCGSMDEARMIF-HLMP-EKNL-IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            KCG ++ A  +F H  P  +++  AW+ +++G++QNG + EA  LF  M REGV  D+ 
Sbjct: 290 CKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRF 349

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL++V  + A+   +   +QVH    K  ++ D  + ++++D Y KCG++EDA  IF  +
Sbjct: 350 TLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA 409

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              ++   TSM+ +YA  G G  A++L+  M   ++ P+      +L+AC+++    +G+
Sbjct: 410 CTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGE 469

Query: 420 QVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE--IPDRGIVSWSAMIGGLA 476
                +  ++G +      N +V++Y + G +D A     E  I    IV W  ++    
Sbjct: 470 LYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIV-WKTLLSACR 528

Query: 477 QH 478
            H
Sbjct: 529 LH 530



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 189/399 (47%), Gaps = 43/399 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ C    D+  G +VHG ++  G   D  + N+++ MYAKCG F  +RR+F A+ ER 
Sbjct: 118 VVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERD 177

Query: 61  VVSWN-SLFSCYVHCDFL------------------------------EEAVCFFKEMVL 89
            VSWN ++ +C    D L                               +A+   + M  
Sbjct: 178 AVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQ 237

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +G+  N ++ S+            LGR++HG  +    + D F  ++L+DMY K G LE 
Sbjct: 238 AGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEA 297

Query: 150 AVAVF---KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           A +VF     +      +W+ ++AG V +   + AL LF++M    +  + FT TS   A
Sbjct: 298 AASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAA 357

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA + + E GRQ+H  + K+  K D  +   +VDMYAKCG++++AR IF     KN+  W
Sbjct: 358 CANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVW 417

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             ++  +  +G    A  LF  M  E +  ++ TL  VL + +    +G+  +   L  K
Sbjct: 418 TSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSH---VGLVSEGE-LYFK 473

Query: 327 TAFESDDYI-----VNSLIDAYGKCGHVEDAVKIFKESS 360
              E    +      N ++D YG+ G ++ A    +E++
Sbjct: 474 QMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENN 512



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 13/269 (4%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFD---AIPERSVVSWNSLFS 69
           LG Q+HG V+    + D FV +SL+ MY KCG    +  +FD    +      +W+++ +
Sbjct: 262 LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVA 321

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            YV     EEA+  F+ M+  G+  + F+L+S+  ACA  G    GR++HG   KL Y  
Sbjct: 322 GYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKL 381

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D   A+A+VDMYAK GNLEDA ++F      +I  W +++     H     A++LF++M 
Sbjct: 382 DAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMT 441

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGS 247
           + ++ PN  T    L AC+ + L   G +L+   ++ E    P +     +VD+Y + G 
Sbjct: 442 AEKMTPNEITLVGVLSACSHVGLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGL 500

Query: 248 MDEARMIFHLMPEKNL----IAWNIVISG 272
           +D+A+   + + E N+    I W  ++S 
Sbjct: 501 LDKAK---NFIEENNINHEAIVWKTLLSA 526



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V  AC +   +  G QVHG V    +  D  +A+++V MYAKCGN  D+R +FD    ++
Sbjct: 354 VAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKN 413

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR-KIH 119
           +  W S+   Y        A+  F+ M    + PNE +L  +++AC+  G    G     
Sbjct: 414 IAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFK 473

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD--IEHPDIVSWNAVIAGCVLHEH 177
               + G    +   N +VD+Y + G L+ A    ++  I H  IV W  +++ C LH+H
Sbjct: 474 QMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIV-WKTLLSACRLHQH 532

Query: 178 NDWA 181
           N++A
Sbjct: 533 NEYA 536


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/644 (38%), Positives = 369/644 (57%), Gaps = 10/644 (1%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D++    ++  YA+    + A+ +F ++   D+VSWN++I GC        A KLF +M 
Sbjct: 41  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +     ++T+ +         E+   L     KM  + D      ++  Y   G ++
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVAEGL---FYKMPFR-DIAAWNSMIYGYCCNGRVE 152

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT--TLSTVLKS 307
           +   +F  MP +N+I+W  +I G  Q+G   EA  LF  M   GV    T  T   V+ +
Sbjct: 153 DGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITA 212

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            A+  A+    Q+HA   K  +  D YI  +LI  Y  C  +ED++++F     +++V  
Sbjct: 213 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 272

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T+++T Y      E+ALK++ EM    + P+    +S LN+C  L A + G+++H   +K
Sbjct: 273 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 332

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  +D F GNSL+ MY +CG+++D    F  I  + IVSW+++I G AQHG G  AL  
Sbjct: 333 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 392

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F QM+   V P+ IT   +L AC+H+G+  + +  F+   +    +   +HYACM+DILG
Sbjct: 393 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILG 452

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           R+GK +EA EL+  MP +AN+ VW  LL A  ++  +EV + AA+ +  +EP  SS +VL
Sbjct: 453 RSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVL 512

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN+YASA  W +V+++RR MK   + K+PG SWI +K     F  GDRSH  S  IY K
Sbjct: 513 LSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQK 572

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L+ +   L + GYVP     LHDVE+ +KE +L +HSE+LA+ FGLI+T  G+TI V KN
Sbjct: 573 LEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKN 632

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR+C DCH++ + I+KIV R+IIVRD  RFHHF +G CSCG YW
Sbjct: 633 LRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 224/462 (48%), Gaps = 24/462 (5%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D ++   ++  YA+   F  + +LF  +P + VVSWNS+      C  L  A   F EM 
Sbjct: 41  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              +     S ++MIN     G   +     G   K+ +  D+ + N+++  Y   G +E
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVA---EGLFYKMPF-RDIAAWNSMIYGYCCNGRVE 152

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS--EINPNMFTYTSALKA 206
           D + +F+++   +++SW ++I G   H  ++ AL LF+QM     E+ P   TY   + A
Sbjct: 153 DGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITA 212

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA       G Q+H  + K+    D  +   L+  YA C  M+++  +FH     N++ W
Sbjct: 213 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 272

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +++G+  N    +A  +F  M REGV  +Q++ ++ L S    +A+   +++H  +VK
Sbjct: 273 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 332

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              E+D ++ NSLI  Y +CG++ D V IFK  S  ++V+  S+I   AQ G G  AL  
Sbjct: 333 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 392

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA- 445
           + +M    + PD    + LL+AC++    ++G+ +      F + S+  +    ++ YA 
Sbjct: 393 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCL------FKYFSENKSAEVKLDHYAC 446

Query: 446 ------KCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGR 480
                 + G +++A+     +P +   + W  ++     H +
Sbjct: 447 MVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 488



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 216/449 (48%), Gaps = 45/449 (10%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI- 92
           NS++  Y   G   D  RLF  +P R+V+SW S+          EEA+  F++M+  G+ 
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198

Query: 93  -RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
            +P   +   +I ACA +     G +IH +  KLGY  D + + AL+  YA    +ED++
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF    H ++V W A++ G  L+  ++ ALK+F +M    + PN  ++TSAL +C G+E
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
             + GR++H + +K+ +++D  VG  L+ MY +CG++++  +IF  + +KN+++WN VI 
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 378

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  Q+G  M A + F  M R  V  D+ T + +L + +                      
Sbjct: 379 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS---------------------- 416

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                +S +   G+C       K F E  S+ V L     M+    + G  EEA +L   
Sbjct: 417 -----HSGMSQKGRC-----LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEEL--- 463

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +++  +  +S V   LL+AC   S  E  ++    II       + A   L N+YA    
Sbjct: 464 IRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSS-AYVLLSNLYASASR 522

Query: 450 IDDADRAFSEIPDRGIV-----SWSAMIG 473
             D  R   E+  RGI      SW  + G
Sbjct: 523 WSDVSRIRREMKQRGITKQPGRSWITIKG 551



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 153/277 (55%), Gaps = 8/277 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC +   L+ G+Q+H  V   G+  D +++ +L+  YA C    DS R+F      +
Sbjct: 209 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMN 268

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV W +L + Y ++C   E+A+  F EM+  G+ PN+ S +S +N+C G      GR+IH
Sbjct: 269 VVIWTALVTGYGLNCKH-EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIH 327

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             ++KLG ++D+F  N+L+ MY + GNL D V +FK I   +IVSWN+VI GC  H    
Sbjct: 328 TAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGM 387

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK---MEIKSDPIVGV 236
           WAL  F QM  S + P+  T+T  L AC+   + + GR L     +    E+K D     
Sbjct: 388 WALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--A 445

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISG 272
            +VD+  + G ++EA  +   MP K N + W +++S 
Sbjct: 446 CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSA 482



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 6/178 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C   + L  G ++H   V  G ++D FV NSL+VMY +CGN  D   +F  I ++++
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 370

Query: 62  VSWNS-LFSCYVH-CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VSWNS +  C  H C     A+ FF +MV S + P+E + + +++AC+ SG S  GR + 
Sbjct: 371 VSWNSVIVGCAQHGCGMW--ALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF 428

Query: 120 GY-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
            Y S     +  +     +VD+  + G LE+A  + +++    + + W  +++ C +H
Sbjct: 429 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           TF+  S++  + +   ID+A   F ++    +  ++ MI G A++ R   ALQ+F +M  
Sbjct: 11  TFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV 70

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
             V    ++  S++  C     +  A+  F+ M ++  +      +  MI+   + GK +
Sbjct: 71  KDV----VSWNSMIKGCFDCADLTMARKLFDEMPERSVVS-----WTTMINGFLQFGKIE 121

Query: 554 EAMELVDTMPFQANASVWGALL 575
            A  L   MPF+ + + W +++
Sbjct: 122 VAEGLFYKMPFR-DIAAWNSMI 142


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/644 (38%), Positives = 369/644 (57%), Gaps = 10/644 (1%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D++    ++  YA+    + A+ +F ++   D+VSWN++I GC        A KLF +M 
Sbjct: 25  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              +     ++T+ +         E+   L     KM  + D      ++  Y   G ++
Sbjct: 85  ERSV----VSWTTMINGFLQFGKIEVAEGL---FYKMPFR-DIAAWNSMIYGYCCNGRVE 136

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT--TLSTVLKS 307
           +   +F  MP +N+I+W  +I G  Q+G   EA  LF  M   GV    T  T   V+ +
Sbjct: 137 DGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITA 196

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            A+  A+    Q+HA   K  +  D YI  +LI  Y  C  +ED++++F     +++V  
Sbjct: 197 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 256

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T+++T Y      E+ALK++ EM    + P+    +S LN+C  L A + G+++H   +K
Sbjct: 257 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 316

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  +D F GNSL+ MY +CG+++D    F  I  + IVSW+++I G AQHG G  AL  
Sbjct: 317 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 376

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F QM+   V P+ IT   +L AC+H+G+  + +  F+   +    +   +HYACM+DILG
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILG 436

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           R+GK +EA EL+  MP +AN+ VW  LL A  ++  +EV + AA+ +  +EP  SS +VL
Sbjct: 437 RSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVL 496

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN+YASA  W +V+++RR MK   + K+PG SWI +K     F  GDRSH  S  IY K
Sbjct: 497 LSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQK 556

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L+ +   L + GYVP     LHDVE+ +KE +L +HSE+LA+ FGLI+T  G+TI V KN
Sbjct: 557 LEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKN 616

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LR+C DCH++ + I+KIV R+IIVRD  RFHHF +G CSCG YW
Sbjct: 617 LRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 224/462 (48%), Gaps = 24/462 (5%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D ++   ++  YA+   F  + +LF  +P + VVSWNS+      C  L  A   F EM 
Sbjct: 25  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
              +     S ++MIN     G   +     G   K+ +  D+ + N+++  Y   G +E
Sbjct: 85  ERSV----VSWTTMINGFLQFGKIEVA---EGLFYKMPF-RDIAAWNSMIYGYCCNGRVE 136

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS--EINPNMFTYTSALKA 206
           D + +F+++   +++SW ++I G   H  ++ AL LF+QM     E+ P   TY   + A
Sbjct: 137 DGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITA 196

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA       G Q+H  + K+    D  +   L+  YA C  M+++  +FH     N++ W
Sbjct: 197 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 256

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
             +++G+  N    +A  +F  M REGV  +Q++ ++ L S    +A+   +++H  +VK
Sbjct: 257 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 316

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
              E+D ++ NSLI  Y +CG++ D V IFK  S  ++V+  S+I   AQ G G  AL  
Sbjct: 317 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 376

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA- 445
           + +M    + PD    + LL+AC++    ++G+ +      F + S+  +    ++ YA 
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCL------FKYFSENKSAEVKLDHYAC 430

Query: 446 ------KCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGR 480
                 + G +++A+     +P +   + W  ++     H +
Sbjct: 431 MVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 472



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 216/449 (48%), Gaps = 45/449 (10%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI- 92
           NS++  Y   G   D  RLF  +P R+V+SW S+          EEA+  F++M+  G+ 
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182

Query: 93  -RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
            +P   +   +I ACA +     G +IH +  KLGY  D + + AL+  YA    +ED++
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF    H ++V W A++ G  L+  ++ ALK+F +M    + PN  ++TSAL +C G+E
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 302

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
             + GR++H + +K+ +++D  VG  L+ MY +CG++++  +IF  + +KN+++WN VI 
Sbjct: 303 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 362

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G  Q+G  M A + F  M R  V  D+ T + +L + +                      
Sbjct: 363 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS---------------------- 400

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                +S +   G+C       K F E  S+ V L     M+    + G  EEA +L   
Sbjct: 401 -----HSGMSQKGRC-----LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEEL--- 447

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +++  +  +S V   LL+AC   S  E  ++    II       + A   L N+YA    
Sbjct: 448 IRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSS-AYVLLSNLYASASR 506

Query: 450 IDDADRAFSEIPDRGIV-----SWSAMIG 473
             D  R   E+  RGI      SW  + G
Sbjct: 507 WSDVSRIRREMKQRGITKQPGRSWITIKG 535



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 153/277 (55%), Gaps = 8/277 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC +   L+ G+Q+H  V   G+  D +++ +L+  YA C    DS R+F      +
Sbjct: 193 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMN 252

Query: 61  VVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV W +L + Y ++C   E+A+  F EM+  G+ PN+ S +S +N+C G      GR+IH
Sbjct: 253 VVIWTALVTGYGLNCKH-EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIH 311

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
             ++KLG ++D+F  N+L+ MY + GNL D V +FK I   +IVSWN+VI GC  H    
Sbjct: 312 TAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGM 371

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK---MEIKSDPIVGV 236
           WAL  F QM  S + P+  T+T  L AC+   + + GR L     +    E+K D     
Sbjct: 372 WALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--A 429

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISG 272
            +VD+  + G ++EA  +   MP K N + W +++S 
Sbjct: 430 CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSA 466



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 6/178 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C   + L  G ++H   V  G ++D FV NSL+VMY +CGN  D   +F  I ++++
Sbjct: 295 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 354

Query: 62  VSWNS-LFSCYVH-CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VSWNS +  C  H C     A+ FF +MV S + P+E + + +++AC+ SG S  GR + 
Sbjct: 355 VSWNSVIVGCAQHGCGMW--ALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF 412

Query: 120 GY-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
            Y S     +  +     +VD+  + G LE+A  + +++    + + W  +++ C +H
Sbjct: 413 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 25/191 (13%)

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP------DSFV 401
            +++A  +F + S  D+   T MIT YA+    + AL+L+ EM  +++          F 
Sbjct: 10  RIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFD 69

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMS-----------------DTFAGNSLVNMY 444
           C+ L  A        +   V    +  GF+                  D  A NS++  Y
Sbjct: 70  CADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGY 129

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG--VLPNHIT 502
              G ++D  R F E+P R ++SW++MIGGL QHGR +EAL +F QM+  G  V P   T
Sbjct: 130 CCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSST 189

Query: 503 LVSVLCACNHA 513
              V+ AC +A
Sbjct: 190 YCCVITACANA 200


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/645 (37%), Positives = 379/645 (58%), Gaps = 7/645 (1%)

Query: 14  GLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G ++H   +  G   +D F  N+LV  YA CG   D+RR+FD +P R VVSWNSL S  +
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALL 196

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
               LE+A      M+ SG+  N  SL S++ AC    D   G  +HG  +K G +S + 
Sbjct: 197 TNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVN 256

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE--HNDWALKLFQQMKS 190
             NALVDMY K G+LE ++ VF  ++  + VSWN+ I GC  H   H D  L++F+ M  
Sbjct: 257 LGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAI-GCFAHAGFHED-VLEMFRLMSE 314

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
            ++ P   T +S L A   +    LG++LH   I+  ++SD  +   L+DMYAK G  ++
Sbjct: 315 HDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEK 374

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  IF  +  +N+++WN +I+   QNG + EA  L   M + G   +  TL  +L + + 
Sbjct: 375 ASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSR 434

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
             ++ + KQ+HA S++ +  SD ++ N+LID Y KCG +  A  IF  S   D V+  ++
Sbjct: 435 VASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEK-DGVSYNTL 493

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  Y+Q     E+L L+ +M+   I  D+      L+AC+NLSA++QGK++H  ++K   
Sbjct: 494 IVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLL 553

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            S  F  NSL+++Y K G +D A + F+ I  + + SW+ MI G   HG+   A ++F  
Sbjct: 554 DSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDL 613

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M +DG+  +H++ ++VL  C+H GLV   K +F  M  +  I+P Q HYACM+D+LGRAG
Sbjct: 614 MKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAG 672

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           +  E+ E++  MPF+AN+ VWGALLG+ RI+ ++E+ + AAE LF ++PE S  + LL N
Sbjct: 673 QLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRN 732

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           +Y+ +GMW+    V++ MK  K++K P  SW++  +K+  F VGD
Sbjct: 733 MYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 777



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 257/480 (53%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +++D   GL VHG+V+  G +S   + N+LV MY K G+   S  +F+ + E++
Sbjct: 226 ILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKN 285

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS   C+ H  F E+ +  F+ M    + P   +LSS++ A    G   LG+++HG
Sbjct: 286 EVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHG 345

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           YSI+   +SD+F AN L+DMYAK G  E A A+F++IE  ++VSWNA+IA    +     
Sbjct: 346 YSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAE 405

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A +L  +M+ +   PN FT  + L AC+ +   ++G+Q+H   I+  + SD  V   L+D
Sbjct: 406 AFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALID 465

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG ++ AR IF    EK+ +++N +I G+ Q+    E+  LF  M   G+  D  +
Sbjct: 466 VYAKCGQLNLARYIFD-RSEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVS 524

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + ++  A    K++H + VK   +S  ++ NSL+D Y K G ++ A KIF   +
Sbjct: 525 FMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRIT 584

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ +  +MI  Y   G  + A +L+  M+D  I  D     ++L+ C++    ++GK+
Sbjct: 585 QKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKK 644

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
               +I             +V++  + G + ++      +P R     W A++G    HG
Sbjct: 645 YFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHG 704



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 281/579 (48%), Gaps = 12/579 (2%)

Query: 16  QVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYV 72
           + H   + +G  +  F +A +L++ YA   +   +  +    P   RS   WNSL     
Sbjct: 32  RAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALA 91

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLS---SMINACAGSGDSLLGRKIHGYSIKLG-YD 128
                 EA+  +  MV SG+RP++ +         A A +     G ++H  +++ G   
Sbjct: 92  SAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLL 151

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           +D+F+ N LV  YA  G   DA  VF ++   D+VSWN++++  + +   + A +    M
Sbjct: 152 ADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGM 211

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
             S +  N+ +  S L AC     +  G  +H  ++K  + S   +G  LVDMY K G +
Sbjct: 212 MRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDL 271

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           + +  +F+ M EKN ++WN  I      G   +   +F  M    V     TLS++L ++
Sbjct: 272 ESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPAL 331

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
                  + K++H  S++ A ESD +I N+L+D Y K G  E A  IF+     ++V+  
Sbjct: 332 VDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWN 391

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +MI    Q G   EA +L +EMQ     P+SF   +LL AC+ +++ + GKQ+H   I+ 
Sbjct: 392 AMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRR 451

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
             MSD F  N+L+++YAKCG ++ A   F      G VS++ +I G +Q     E+L +F
Sbjct: 452 SLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDG-VSYNTLIVGYSQSQCCFESLHLF 510

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILG 547
            QM   G+  + ++ +  L AC++     + K  H   +++     P   +   ++D+  
Sbjct: 511 QQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLAN--SLLDVYT 568

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
           + G    A ++ + +  Q + + W  ++    ++  ++V
Sbjct: 569 KGGMLDTASKIFNRIT-QKDVASWNTMILGYGMHGQIDV 606


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/670 (35%), Positives = 379/670 (56%), Gaps = 2/670 (0%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC+S + L  G ++H  ++ +    D  + N ++ MY KCG+  D+R +FD +PER++VS
Sbjct: 76  ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           + S+ + Y       EA+  + +M+   + P++F+  S+I ACA S D  LG+++H   I
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           KL   S + + NAL+ MY +   + DA  VF  I   D++SW+++IAG         AL 
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255

Query: 184 LFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
             ++M S  + +PN + + S+LKAC+ +   + G Q+H   IK E+  + I G  L DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           A+CG ++ AR +F  +   +  +WN++I+G   NG   EA S+F  M   G   D  +L 
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSA 361
           ++L +     A+    Q+H+  +K  F +D  + NSL+  Y  C  +     +F++  + 
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D V+  +++TA  Q     E L+L+  M   E  PD     +LL  C  +S+ + G QV
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H + +K G   + F  N L++MYAKCGS+  A R F  + +R +VSWS +I G AQ G G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           +EAL +F +M   G+ PNH+T V VL AC+H GLV E    + +M+ + GI P +EH +C
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++D+L RAG+  EA   +D M  + +  VW  LL A +   NV + Q AAE +  I+P  
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFN 675

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S+ HVLL +++AS+G W+N A +R  MK + +KK PG SWIE++DK++ F   D  H   
Sbjct: 676 STAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPER 735

Query: 662 KEIYAKLDEV 671
            +IY  L  +
Sbjct: 736 DDIYTVLHNI 745



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 240/485 (49%), Gaps = 8/485 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KAC S  D+ LG Q+H  V+     S     N+L+ MY +     D+ R+F  IP + 
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++SW+S+ + +    F  EA+   KEM+  G+  PNE+   S + AC+       G +IH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  IK     +  +  +L DMYA+ G L  A  VF  IE PD  SWN +IAG   + + D
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ +F QM+SS   P+  +  S L A         G Q+H  +IK    +D  V   L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413

Query: 240 DMYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
            MY  C  +     +F       + ++WN +++  LQ+   +E   LF  M       D 
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+  +L+      ++ +  QVH  S+KT    + +I N LID Y KCG +  A +IF  
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+ +++I  YAQ G GEEAL L+ EM+   I P+      +L AC+++   E+G
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593

Query: 419 KQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGG 474
            +++  +  + G        + +V++ A+ G +++A+R   E+   PD  +V W  ++  
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD--VVVWKTLLSA 651

Query: 475 LAQHG 479
               G
Sbjct: 652 CKTQG 656



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 237/478 (49%), Gaps = 6/478 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S+I AC+ S     GRKIH + +      D    N ++ MY K G+L DA  VF  +   
Sbjct: 72  SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VS+ +VI G   +     A++L+ +M   ++ P+ F + S +KACA      LG+QLH
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             +IK+E  S  I    L+ MY +   M +A  +F+ +P K+LI+W+ +I+G  Q G + 
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251

Query: 281 EAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
           EA S    M   GV   ++    + LK+ +S        Q+H L +K+    +     SL
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
            D Y +CG +  A ++F +    D  +   +I   A  G  +EA+ ++ +M+     PD+
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               SLL A     A  QG Q+H +IIK+GF++D    NSL+ MY  C  +      F +
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431

Query: 460 IPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVA 517
             +    VSW+ ++    QH +  E L++F  ML     P+HIT+ ++L  C   + L  
Sbjct: 432 FRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 491

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++ H  S+  K G+ P Q     +ID+  + G   +A  + D+M  +   S W  L+
Sbjct: 492 GSQVHCYSL--KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS-WSTLI 546



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 182/324 (56%), Gaps = 5/324 (1%)

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           K+S     + TY S + AC+       GR++H  ++    K D I+   ++ MY KCGS+
Sbjct: 59  KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 118

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            +AR +F  MPE+NL+++  VI+G+ QNG   EA  L+  M +E +  DQ    +++K+ 
Sbjct: 119 RDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           AS   +G+ KQ+HA  +K   ES  +++  N+LI  Y +   + DA ++F      DL++
Sbjct: 179 ASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
            +S+I  ++Q G   EAL    EM    + +P+ ++  S L AC++L   + G Q+H   
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK     +  AG SL +MYA+CG ++ A R F +I      SW+ +I GLA +G   EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356

Query: 486 QMFGQMLEDGVLPNHITLVSVLCA 509
            +F QM   G +P+ I+L S+LCA
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCA 380



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 219/460 (47%), Gaps = 49/460 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC+S      G Q+HG+ + +    +     SL  MYA+CG    +RR+FD I     
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL--GRKIH 119
            SWN + +   +  + +EAV  F +M  SG  P+  SL S++  CA +    L  G +IH
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGMQIH 394

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
            Y IK G+ +D+   N+L+ MY    +L     +F+D   + D VSWN ++  C+ HE  
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
              L+LF+ M  SE  P+  T  + L+ C  +   +LG Q+HC  +K  +  +  +  GL
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAKCGS+ +AR IF  M  +++++W+ +I G+ Q+G   EA  LF  M   G+  + 
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL +         C  V                          G VE+ +K++  
Sbjct: 575 VTFVGVLTA---------CSHV--------------------------GLVEEGLKLYAT 599

Query: 359 SSAVDLVA-----CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
                 ++     C+ ++   A+ G   EA +   EM+   + PD  V  +LL+AC    
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSACKTQG 656

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
                ++   +I+K    + T A   L +M+A  G+ ++A
Sbjct: 657 NVHLAQKAAENILKIDPFNST-AHVLLCSMHASSGNWENA 695



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 121/213 (56%), Gaps = 1/213 (0%)

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T  +++ + +S +++   +++H   + +  + D  + N ++  YGKCG + DA ++F   
Sbjct: 69  TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              +LV+ TS+IT Y+Q G G EA++LYL+M   ++ PD F   S++ ACA+ S    GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           Q+H  +IK    S   A N+L+ MY +   + DA R F  IP + ++SWS++I G +Q G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248

Query: 480 RGKEALQMFGQMLEDGVL-PNHITLVSVLCACN 511
              EAL    +ML  GV  PN     S L AC+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/640 (37%), Positives = 366/640 (57%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+AC   +    G QVHG+    G D++ FV  +LV +YAK G    +  +FDA+P R+ 
Sbjct: 144 LRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNP 203

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           V+W ++ + Y        A+  F  M L G+RP+ F L+S  +AC+G G    GR+IHGY
Sbjct: 204 VTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGY 263

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           + +   +SD    NAL+D+Y K   L  A  +F  +E+ ++VSW  +IAG + +  +  A
Sbjct: 264 AYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEA 323

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           + +F Q+  +   P++F  TS L +C  +     GRQ+H  +IK +++SD  V   L+DM
Sbjct: 324 MSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDM 383

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YAKC  + EAR +F  + E + I++N +I G+ + G    A  +F  M    +     T 
Sbjct: 384 YAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTF 443

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L   +S   + + KQ+H L VK+    D Y  ++LID Y K   V+DA  +F     
Sbjct: 444 VSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQN 503

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            D+V   +MI   AQ   GEEA+KL+  ++   + P+ F   +L+   + L++   G+Q 
Sbjct: 504 RDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQF 563

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H  IIK G  SD    N+L++MYAKCG I++    F     + ++ W++MI   AQHG  
Sbjct: 564 HAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHA 623

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           +EAL +FG M   GV PN++T VSVL AC HAGLV E  HHF SM+ K+ ++P  EHYA 
Sbjct: 624 EEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYAS 683

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++++ GR+GK   A E ++ MP +  A++W +LL A  ++ NVE+G++A EM    +P  
Sbjct: 684 VVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPAD 743

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
           S   VL+SNIYAS G+W +  K+R+ M    + KEPG SW
Sbjct: 744 SGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783



 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/629 (32%), Positives = 332/629 (52%), Gaps = 12/629 (1%)

Query: 18  HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           H   V +G   D F+AN L+  Y+K G   D+RRLFD++P R++VSW S  S Y      
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112

Query: 78  EEAVCFFKEMVLSGIR------PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           ++A+  F     +G        PNEF L+S + ACA S  +  G ++HG + KLG D+++
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           F   ALV++YAK G ++ A++VF  +   + V+W AVI G         AL+LF +M   
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + P+ F   SA  AC+G+   E GRQ+H    +   +SD  V   L+D+Y KC  +  A
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           R +F  M  +NL++W  +I+G++QN  D EA S+F  + + G   D    +++L S  S 
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            AI   +QVHA  +K   ESD+Y+ N+LID Y KC H+ +A  +F+  +  D ++  +MI
Sbjct: 353 AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 412

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
             YA+ G    A++++ +M+   + P      SLL   ++ S  E  KQ+H  I+K G  
Sbjct: 413 EGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTS 472

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D +AG++L+++Y+K   +DDA   FS + +R +V W+AMI GLAQ+ RG+EA+++F ++
Sbjct: 473 LDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARL 532

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
              G+ PN  T V+++   +    +   +  F +   K G          +ID+  + G 
Sbjct: 533 RVSGLTPNEFTFVALVTVASTLASIFHGQ-QFHAQIIKAGADSDPHISNALIDMYAKCGF 591

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML--FAIEPEKSSTHVLLS 609
            +E   L ++     +   W +++     + + E   H   M+    +EP   +   +LS
Sbjct: 592 IEEGRLLFEST-LGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLS 650

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
              A AG+ D        MK  K   EPG
Sbjct: 651 AC-AHAGLVDEGLHHFNSMK-TKYAVEPG 677



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/420 (34%), Positives = 230/420 (54%), Gaps = 13/420 (3%)

Query: 98  SLSSMINACAGSGDSLLGRKI----HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           SL+ ++ +C  +GD L  R++    H  ++  G   D+F AN L+  Y+K+G L DA  +
Sbjct: 31  SLAQLLLSCL-AGDRL--RRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRL 87

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI------NPNMFTYTSALKAC 207
           F  +   ++VSW + I+    H   D AL LF    S+         PN F   SAL+AC
Sbjct: 88  FDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRAC 147

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           A       G Q+H    K+ + ++  VG  LV++YAK G +D A  +F  +P +N + W 
Sbjct: 148 AQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWT 207

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            VI+G+ Q G    A  LF  M  +GV  D+  L++   + +    +   +Q+H  + +T
Sbjct: 208 AVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRT 267

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
           A ESD  +VN+LID Y KC  +  A ++F      +LV+ T+MI  Y Q  L  EA+ ++
Sbjct: 268 AAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMF 327

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            ++      PD F C+S+LN+C +L+A  QG+QVH H+IK    SD +  N+L++MYAKC
Sbjct: 328 WQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKC 387

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
             + +A   F  + +   +S++AMI G A+ G    A+++FG+M    + P+ +T VS+L
Sbjct: 388 EHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLL 447



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 219/405 (54%), Gaps = 11/405 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L +C S   ++ G QVH  V+    +SDE+V N+L+ MYAKC +  ++R +F+A+ E  
Sbjct: 345 ILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDD 404

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +S+N++   Y     L  AV  F +M    ++P+  +  S++   +   D  L ++IHG
Sbjct: 405 AISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHG 464

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +K G   D+++ +AL+D+Y+K   ++DA  VF  +++ D+V WNA+I G   +E  + 
Sbjct: 465 LIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEE 524

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+KLF +++ S + PN FT+ + +   + +     G+Q H  +IK    SDP +   L+D
Sbjct: 525 AVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALID 584

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++E R++F     K++I WN +IS + Q+G   EA  +F  M   GV  +  T
Sbjct: 585 MYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVT 644

Query: 301 LSTVLKSVASFQAIGVCKQVH---ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             +VL + A   A  V + +H   ++  K A E       S+++ +G+ G +  A K F 
Sbjct: 645 FVSVLSACA--HAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLH-AAKEFI 701

Query: 358 ESSAVDLVACT--SMITAYAQFG---LGEEALKLYLEMQDREINP 397
           E   ++ VA    S+++A   FG   +G  A ++ L     +  P
Sbjct: 702 ERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGP 746


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/628 (38%), Positives = 349/628 (55%), Gaps = 21/628 (3%)

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF--TYTSALKACAGMELKELGRQLHCS 222
           W   I       H   A+ LF +M++S    +    +  +ALK+CA + L  LG  LH  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 223 LIKMEIKSDPIVGVGLVDMYAK--CGSMDEA-----------------RMIFHLMPEKNL 263
            I+    +D      L+++Y K  C  +D                   R +F  M E+++
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN ++ G  + G   EA      M REG   D  TLSTVL   A    +    +VH  
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           + +  F+SD ++ +SLID Y  C   + +VK+F      D +   S++   AQ G  EEA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L ++  M    + P     SSL+  C NL++   GKQ+H ++I  GF  + F  +SL++M
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y KCG I  A   F ++    +VSW+AMI G A HG  +EAL +F +M      PNHIT 
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           ++VL AC+HAGLV +   +F+SM   +GI P  EH+A + D LGRAG+  EA   +  M 
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            +  ASVW  LL A R++KN  + +  A+ +  +EP    +HV+LSN+Y+++G W+  A 
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           +R  M+   +KK+P  SWIEVK K++ F   DRSH     I   L+  S+ + + G+VP 
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
            E    D+EE  K  +L  HSEKLA+ FG+I+TP G  IRV KNLR+C+DCHT  +FISK
Sbjct: 556 TEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISK 615

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  REI+VRD NRFHHF++G+CSCG +W
Sbjct: 616 LADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 225/479 (46%), Gaps = 34/479 (7%)

Query: 79  EAVCFFKEMVLSGIRPNEF--SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           +AV  F  M  S    +    SL + + +CA  G S LG  +H  +I+ G  +D F+ANA
Sbjct: 31  DAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANA 90

Query: 137 LVDMYAKV-------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           L+++Y KV                      E    VF ++   D+VSWN ++ GC     
Sbjct: 91  LLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGR 150

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
           +  AL   ++M      P+ FT ++ L   A     + G ++H    +    SD  VG  
Sbjct: 151 HHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSS 210

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+DMYA C   D +  +F  +P ++ I WN +++G  QNG   EA  +F  M + GV   
Sbjct: 211 LIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S+++    +  ++   KQ+HA  +   FE + +I +SLID Y KCG +  A  IF 
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFD 330

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           + S+ D+V+ T+MI  YA  G   EAL L+  M+     P+     ++L AC++    ++
Sbjct: 331 KMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 390

Query: 418 G----KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMI 472
           G    K +  H   +G +       +L +   + G +D+A    S++  +   S WS ++
Sbjct: 391 GWKYFKSMSNH---YGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447

Query: 473 GGLAQHGRGKEALQMFGQM--LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
                H     A ++  ++  LE   + +H+ L ++  A   +G   EA H  ESM KK
Sbjct: 448 RACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSA---SGRWNEAAHLRESMRKK 503



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 238/537 (44%), Gaps = 77/537 (14%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG-NFIDS----------- 49
           LK+C +     LG  +H + + +G  +D F AN+L+ +Y K   +++DS           
Sbjct: 57  LKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGS 116

Query: 50  -------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSM 102
                  R++FD + ER VVSWN+L           EA+ F ++M   G RP+ F+LS++
Sbjct: 117 STAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTV 176

Query: 103 INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI 162
           +   A   D   G ++HG++ + G+DSD+F  ++L+DMYA     + +V VF ++   D 
Sbjct: 177 LPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDH 236

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
           + WN+++AGC  +   + AL +F++M  + + P   T++S +  C  +     G+QLH  
Sbjct: 237 ILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAY 296

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
           +I    + +  +   L+DMY KCG +  A  IF  M   ++++W  +I G+  +G   EA
Sbjct: 297 VICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREA 356

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             LF  M       +  T   VL + +           HA                    
Sbjct: 357 LVLFERMELGNAKPNHITFLAVLTACS-----------HA-------------------- 385

Query: 343 YGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYA-QFGLGEEALKLYLEMQDREINPDSF 400
               G V+   K FK  S+   +V       A A   G   E  + Y  +   +I P + 
Sbjct: 386 ----GLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTAS 441

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFS 458
           V S+LL AC         ++V   I++    S    G+ +V  NMY+  G  ++A     
Sbjct: 442 VWSTLLRACRVHKNTMLAEEVAKKIMELEPRS---IGSHVVLSNMYSASGRWNEAAHLRE 498

Query: 459 EIPDRGI-----VSWSAMIGGL---AQHGRGK-------EALQMFG-QMLEDGVLPN 499
            +  +G+      SW  +   L     H R         +AL  F  QM  +G +PN
Sbjct: 499 SMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 14/243 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  C +   L  G Q+H  V+  GF+ + F+++SL+ MY KCG    +  +FD +    
Sbjct: 277 LIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPD 336

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           VVSW ++   Y       EA+  F+ M L   +PN  +  +++ AC+ +G    G K   
Sbjct: 337 VVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFK 396

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S   G    +    AL D   + G L++A      ++  P    W+ ++  C +H++ 
Sbjct: 397 SMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNT 456

Query: 179 DWALKLFQQMKSSE--------INPNMFTYTSALKACA----GMELKELGRQLHCSLIKM 226
             A ++ +++   E        +  NM++ +      A     M  K + +   CS I++
Sbjct: 457 MLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEV 516

Query: 227 EIK 229
           + K
Sbjct: 517 KSK 519


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/649 (36%), Positives = 381/649 (58%), Gaps = 8/649 (1%)

Query: 130  DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            ++ ++N L+DMY K      A  VF  +   ++VSW+A+++G VL+     +L LF +M 
Sbjct: 411  NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 190  SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
               I PN FT+++ LKAC  +   E G Q+H   +K+  +    VG  LVDMY+KCG ++
Sbjct: 471  RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530

Query: 250  EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG--FDQTTLSTVLKS 307
            EA  +F  + +++LI+WN +I+G +  G   +A   F  M    +    D+ TL+++LK+
Sbjct: 531  EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590

Query: 308  VASFQAIGVCKQVHALSVKTAFE--SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
             +S   I   KQ+H   V++ F   S   I  SL+D Y KCG++  A K F +     ++
Sbjct: 591  CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650

Query: 366  ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
            + +S+I  YAQ G   EA+ L+  +Q+     DSF  SS++   A+ +   QGKQ+    
Sbjct: 651  SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 710

Query: 426  IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
            +K     +T   NS+V+MY KCG +D+A++ F+E+  + ++SW+ +I G  +HG GK+++
Sbjct: 711  VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 770

Query: 486  QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            ++F +ML   + P+ +  ++VL AC+H+G++ E +  F  + +  GI+P  EHYAC++D+
Sbjct: 771  RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 830

Query: 546  LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTH 605
            LGRAG+ +EA  L+DTMP + N  +W  LL   R++ ++E+G+   ++L  I+ +  + +
Sbjct: 831  LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 890

Query: 606  VLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIY 665
            V++SN+Y  AG W+     R       LKKE GMSW+E++ +V+ F  G+ SH  +  I 
Sbjct: 891  VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQ 950

Query: 666  AKLDEVSDLLNKA-GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA---TPPGAT 721
              L E    L +  GYV  ++ +LHD+++  KE+ L  HSEKLA+   L        G T
Sbjct: 951  ETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT 1010

Query: 722  IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
            IRV KNLR+CVDCH   + +SKI     +VRD  RFH F +G CSCG Y
Sbjct: 1011 IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 249/454 (54%), Gaps = 6/454 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
            +N L+ MY KC   + + ++FD++PER+VVSW++L S +V    L+ ++  F EM   G
Sbjct: 414 TSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG 473

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           I PNEF+ S+ + AC        G +IHG+ +K+G++  +   N+LVDMY+K G + +A 
Sbjct: 474 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 533

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI--NPNMFTYTSALKACAG 209
            VF+ I    ++SWNA+IAG V   +   AL  F  M+ + I   P+ FT TS LKAC+ 
Sbjct: 534 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 593

Query: 210 MELKELGRQLHCSLIK--MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
             +   G+Q+H  L++      S   +   LVD+Y KCG +  AR  F  + EK +I+W+
Sbjct: 594 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 653

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +I G+ Q G  +EA  LF  +       D   LS+++   A F  +   KQ+ AL+VK 
Sbjct: 654 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL 713

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
               +  ++NS++D Y KCG V++A K F E    D+++ T +IT Y + GLG+++++++
Sbjct: 714 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 773

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAK 446
            EM    I PD     ++L+AC++    ++G+++   +++  G          +V++  +
Sbjct: 774 YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 833

Query: 447 CGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
            G + +A      +P +  V  W  ++     HG
Sbjct: 834 AGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 867



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 210/414 (50%), Gaps = 11/414 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LKAC     L  GLQ+HG  +  GF+    V NSLV MY+KCG   ++ ++F  I +RS+
Sbjct: 485 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL 544

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI--RPNEFSLSSMINACAGSGDSLLGRKIH 119
           +SWN++ + +VH  +  +A+  F  M  + I  RP+EF+L+S++ AC+ +G    G++IH
Sbjct: 545 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 604

Query: 120 GYSIKLGY--DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           G+ ++ G+   S      +LVD+Y K G L  A   F  I+   ++SW+++I G      
Sbjct: 605 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 664

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              A+ LF++++      + F  +S +   A   L   G+Q+    +K+    +  V   
Sbjct: 665 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 724

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           +VDMY KCG +DEA   F  M  K++I+W +VI+G+ ++G   ++  +F  M R  +  D
Sbjct: 725 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 784

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +     VL + +    I   +++ +  ++T   +        ++D  G+ G +++A  + 
Sbjct: 785 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 844

Query: 357 KESSAVDLV----ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
                   V       S+   +    LG+E  K+ L +  +  NP ++V  S L
Sbjct: 845 DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK--NPANYVMMSNL 896



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 143/275 (52%), Gaps = 4/275 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +LKAC+S   ++ G Q+HG +V +GF   S   +  SLV +Y KCG    +R+ FD I E
Sbjct: 587 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 646

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++++SW+SL   Y       EA+  FK +     + + F+LSS+I   A       G+++
Sbjct: 647 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 706

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
              ++KL    +    N++VDMY K G +++A   F +++  D++SW  VI G   H   
Sbjct: 707 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 766

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVG 237
             ++++F +M    I P+   Y + L AC+   + + G +L   L++   IK        
Sbjct: 767 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 826

Query: 238 LVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVIS 271
           +VD+  + G + EA+ +   MP K N+  W  ++S
Sbjct: 827 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 861


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/561 (41%), Positives = 343/561 (61%), Gaps = 3/561 (0%)

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           E GR++H  L         I   GLV MYAKCG +DEAR IF+ + E+ +++W+ +I  +
Sbjct: 2   EEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAY 61

Query: 274 LQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FES 331
             +G   EA  LF  M  +G V  +  T + V  +    + +   +++HAL++ +   +S
Sbjct: 62  ALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKS 121

Query: 332 DDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
            + I+ N+L++ Y +CG +E+A K+F      D  + TSMITA  +     EAL+L+  M
Sbjct: 122 SNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRM 181

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
               I P S   +S+LNACA   A + GKQ+H  +   GF S   A  +L++MYAKCGS+
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 241

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           + + + F+ +  R  VSW+AMI  LAQHG+G EAL++F +M  +G++ +  T + VL AC
Sbjct: 242 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 301

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +HAGL+ E+   F SM + + I P + HY   +D +GRAG+ Q+A EL+ +MPF      
Sbjct: 302 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLT 361

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W  LL A RI+   E     AE+L  + PE S  + LL N+YA+ G + +  +VR+ M D
Sbjct: 362 WKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTD 421

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             LKK PG S+IEVK+KV+ F  GDR+H    EI  +L+++   + +AGYVP  +  LH 
Sbjct: 422 RGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHA 481

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           V E EKEQL+  HSEKLA+AFGLIATPPG  + + KNLR+C DCH + + I+KI+ R I+
Sbjct: 482 VNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIV 541

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           VRD +RFHHF +G CSC  YW
Sbjct: 542 VRDTHRFHHFEDGQCSCKDYW 562



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 227/509 (44%), Gaps = 61/509 (11%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  +   GF       N LV MYAKCG   ++R +F+ I ER+VVSW+++   Y  
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 74  CDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG--YDSD 130
               +EA+  F  M   G + PN  + + + NAC    D   GR+IH  ++  G    S+
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
               NAL++MY + G+LE+A  VF  ++HPD  SW ++I  C  +     AL+LF +M  
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNL 183

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             I P   T  S L ACA     ++G+Q+H  L      S  +    L+DMYAKCGS++ 
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           +  +F  M  +N ++W  +I+   Q+G   EA  LF  M  EG+  D TT   VL++ + 
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303

Query: 311 FQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
               G+ K+     H++    A    +      +D  G+ G ++DA ++           
Sbjct: 304 ---AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEEL----------- 349

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
                                  +     +P++    +LLNAC   S  E+  +V   + 
Sbjct: 350 -----------------------IHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLS 386

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDD--------ADRAFSEIPDRGIVSWS----AMIGG 474
           K     D+ A   L N+YA  G   D         DR   ++P +  +         + G
Sbjct: 387 KLA-PEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAG 445

Query: 475 LAQHGRGKEAL----QMFGQMLEDGVLPN 499
              H    E L    ++ G+M E G +PN
Sbjct: 446 DRAHPSRDEILLELEKLGGRMREAGYVPN 474



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 145/278 (52%), Gaps = 8/278 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG--FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           V  AC   +DL  G ++H + + +G    S+  + N+L+ MY +CG+  ++R++FD +  
Sbjct: 93  VFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDH 152

Query: 59  RSVVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
               SW S+ + C  +C+ LE A+  F  M L GI P   +L+S++NACA SG   +G++
Sbjct: 153 PDAFSWTSMITACTENCELLE-ALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQ 211

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH      G+ S + +  AL+DMYAK G+LE +  VF  +E  + VSW A+IA    H  
Sbjct: 212 IHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQ 271

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDPIVG 235
            D AL+LF++M    +  +  T+   L+AC  AG+ +KE     H  +    I       
Sbjct: 272 GDEALELFKEMNLEGMVADATTFICVLRACSHAGL-IKESLEFFHSMVEDYAIAPTETHY 330

Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
              +D   + G + +A  + H MP     + W  +++ 
Sbjct: 331 CRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNA 368


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/613 (37%), Positives = 369/613 (60%), Gaps = 24/613 (3%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  Q  S + +  + TY S L+ CA ++  + GR++H  +   +++ D ++G  LV 
Sbjct: 87  AMELINQ--SPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVF 144

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG----- 295
           MY  CG + E R IF  +  + +  WN++++G+ + G   E+ SLF  M   G+      
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204

Query: 296 ---FDQ----------TTLSTVLKSVASFQAIGVCKQVHALSVKTAFES----DDYIVNS 338
              FD+          + +S  + +  S + + + +Q+  L + T   +    +  + N 
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNC 264

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+D Y K G++  A+++F+      +V+ TSMI  YA+ GL + +++L+ EM+  ++ P+
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           S   + +L ACA+L+A E+G+++H HI++ GF  D    N+LV+MY KCG++  A   F 
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 384

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            IP++ +VSW+ MI G   HG G EA+  F +M   G+ P+ ++ +S+L AC+H+GL+ E
Sbjct: 385 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
               F  M     I+P  EHYAC++D+L RAG   +A + +  MP + +A++WGALL   
Sbjct: 445 GWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 504

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RIY +V++ +  AE +F +EPE +  +VLL+NIYA A  W+ V K+R  +    L+K PG
Sbjct: 505 RIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPG 564

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            SWIE+K KV+ F  GD SH  + +I   L +    + + G+ P +   L   +++EKE 
Sbjct: 565 CSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEM 624

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L  HSEK+A+AFG+++ PPG T+RV KNLR+C DCH   +F+SK+V R+II+RD NRFH
Sbjct: 625 ALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFH 684

Query: 759 HFRNGSCSCGGYW 771
           HF++GSCSC G+W
Sbjct: 685 HFKDGSCSCRGHW 697



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 22/327 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   K +  G ++H I+     + D  + + LV MY  CG+  + RR+FD +    
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNE--------------FSLSSMINAC 106
           V  WN L + Y       E++  FK M   GIR  E               S +SMI+  
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSA--------NALVDMYAKVGNLEDAVAVFKDIE 158
             +G S  G  +    + LG ++D+ +         N L+DMY+K GNL  A+ VF+ + 
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG 286

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
              +VSW ++IAG      +D +++LF +M+  ++ PN  T    L ACA +   E G++
Sbjct: 287 ERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQE 346

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +++     D  V   LVDMY KCG++  AR++F ++PEK+L++W ++I+G+  +G 
Sbjct: 347 IHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGY 406

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVL 305
             EA + F  M   G+  D+ +  ++L
Sbjct: 407 GSEAIAAFNEMRNSGIEPDEVSFISIL 433



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 210/484 (43%), Gaps = 65/484 (13%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
           S++  CA       GR+IH        + D    + LV MY   G+L +   +F  + + 
Sbjct: 106 SVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANE 165

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI--------------NPNMFTYTSALKA 206
            +  WN ++ G     +   +L LF++M+   I              + ++ ++ S +  
Sbjct: 166 KVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISG 225

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVG--------LVDMYAKCGSMDEARMIFHLM 258
                L E G  L   ++ + I +D    V         L+DMY+K G+++ A  +F  M
Sbjct: 226 YVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETM 285

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            E+++++W  +I+G+ + G    +  LF  M +E +  +  T++ +L + AS  A+   +
Sbjct: 286 GERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQ 345

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H   ++  F  D ++ N+L+D Y KCG +  A  +F      DLV+ T MI  Y   G
Sbjct: 346 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 405

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
            G EA+  + EM++  I PD     S+L AC++    ++G         +GF        
Sbjct: 406 YGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG---------WGFF------- 449

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
              NM      I+     ++ I D            LA+ G   +A +    M    + P
Sbjct: 450 ---NMMRNNCCIEPKSEHYACIVDL-----------LARAGNLSKAYKFIKMM---PIEP 492

Query: 499 NHITLVSVLCACN--HAGLVAE--AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           +     ++LC C   H   +AE  A+H FE   +  G      +Y  + +I   A K++E
Sbjct: 493 DATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTG------YYVLLANIYAEAEKWEE 546

Query: 555 AMEL 558
             +L
Sbjct: 547 VKKL 550



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N L+ MY+K GN   + ++F+ + ERSVVSW S+ + Y      + +V  F EM    + 
Sbjct: 263 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLF 322

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           PN  +++ ++ ACA       G++IHG+ ++ G+  D   ANALVDMY K G L  A  +
Sbjct: 323 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 382

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  I   D+VSW  +IAG  +H +   A+  F +M++S I P+  ++ S L AC+   L 
Sbjct: 383 FDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 442

Query: 214 ELG-------RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIA 265
           + G       R   C    +E KS+    +  VD+ A+ G++ +A     +MP E +   
Sbjct: 443 DEGWGFFNMMRNNCC----IEPKSEHYACI--VDLLARAGNLSKAYKFIKMMPIEPDATI 496

Query: 266 WNIVISG 272
           W  ++ G
Sbjct: 497 WGALLCG 503



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 10/181 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC S   L  G ++HG ++  GF  D  VAN+LV MY KCG    +R LFD IPE+ 
Sbjct: 331 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 390

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + + Y    +  EA+  F EM  SGI P+E S  S++ AC+ SG  LL      
Sbjct: 391 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSG--LLDEGWGF 448

Query: 121 YSIK-----LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
           +++      +   S+ ++   +VD+ A+ GNL  A    K +   PD   W A++ GC +
Sbjct: 449 FNMMRNNCCIEPKSEHYA--CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 506

Query: 175 H 175
           +
Sbjct: 507 Y 507


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/579 (39%), Positives = 335/579 (57%), Gaps = 1/579 (0%)

Query: 194 NPNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           NP+  T   ALK+ + +      G QLH   +K+   ++P V   L+ +YAKCG +  A+
Sbjct: 67  NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 126

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  MP  + + W  +I+ ++  G   EA  +    +  G+  D  T   VL + A   
Sbjct: 127 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 186

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +   + V   + +       ++  + +D Y KCG +  A ++F +    D VA  +M+ 
Sbjct: 187 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 246

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            YA  G   EAL L+L MQ   + PD +  +  L+AC  L A + G+Q    +    F+ 
Sbjct: 247 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +   G +L++MYAKCGS  +A   F ++  + I+ W+AMI GL   G  K A  + GQM 
Sbjct: 307 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 366

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           + GV  N  T + +LC+C H GL+ + + +F +M K + I P  EHY CM+D+L RAG  
Sbjct: 367 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 426

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           QEA +LVD MP  ANA + GALLG  +I++N E+ +H  + L  +EP  S  +V+LSNIY
Sbjct: 427 QEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 486

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           ++ G W++ AK+R  MK   ++K P  SW+E + KV+ F VGD+SH  S +IY KLDE+ 
Sbjct: 487 SNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 546

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
             +   GY P  E  + DVE+ EKE  L HHSEKLA+AF L+ T PG TIRV KNLR+C 
Sbjct: 547 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 606

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCHT+ + +S+I  REIIVRD NRFH FR+GSCSC  YW
Sbjct: 607 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 215/462 (46%), Gaps = 48/462 (10%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L  G Q+H   +     ++  V  SL+ +YAKCG    ++R+FD +P  S V W +L + 
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y+    L EAV   +    +G+RP+ F+   ++ ACA   D   G  +   + + G    
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +F A A VD+Y K G +  A  VF  + H D V+W A++ G   + H   AL LF  M++
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM----EIKSDPIVGVGLVDMYAKCG 246
             + P+ +    AL AC  +   +LGRQ     I+M    E   +P++G  L+DMYAKCG
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDEFLDNPVLGTALIDMYAKCG 322

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           S  EA ++F  M +K++I WN +I G    G +  A +L   M + GV  +  T   +L 
Sbjct: 323 STVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL- 381

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                     C   H   ++                     +  +  K++  S  ++   
Sbjct: 382 ----------CSCTHTGLIQDGRR-----------------YFHNMTKLYHISPRIEHYG 414

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C  M+   ++ GL +EA +L   + D  +  ++ +  +LL  C       +  ++  H++
Sbjct: 415 C--MVDLLSRAGLLQEAHQL---VDDMPMPANAVILGALLGGC----KIHRNTELAEHVL 465

Query: 427 KFGFMSDTF-AGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           K   + + + +GN   L N+Y+  G  +DA +   ++  +G+
Sbjct: 466 KQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGV 507



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 6/382 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H  S+KL   ++     +L+ +YAK G L  A  VF ++ HP  V W A+I   + 
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 149

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A+ + +   ++ + P+ FT    L ACA +     G  +  +  +  +     V
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 209

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               VD+Y KCG M +AR +F  M  K+ +AW  ++ G+  NG   EA  LF  M  EG+
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 269

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   ++  L +     A+ + +Q   +     F  +  +  +LID Y KCG   +A  
Sbjct: 270 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 329

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR--EINPDSFVCSSLLNACANL 412
           +F++    D++   +MI      G  + A  L  +M+    ++N ++F+   LL +C + 
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFI--GLLCSCTHT 387

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              + G++   ++ K   +S        +V++ ++ G + +A +   ++P     V   A
Sbjct: 388 GLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 447

Query: 471 MIGGLAQHGRGKEALQMFGQML 492
           ++GG   H   + A  +  Q++
Sbjct: 448 LLGGCKIHRNTELAEHVLKQLI 469



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 15/283 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    DL  G  V       G     FVA + V +Y KCG    +R +FD +  + 
Sbjct: 178 VLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKD 237

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++   Y       EA+  F  M   G++P+ ++++  ++AC   G   LGR+   
Sbjct: 238 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ--- 294

Query: 121 YSIKLGYDSDMFSAN-----ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            +I++  D D F  N     AL+DMYAK G+  +A  VF+ +   DI+ WNA+I G  + 
Sbjct: 295 -AIRM-VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMT 352

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            H   A  L  QM+ S +  N  T+   L +C    L + GR+   ++ K+   S  I  
Sbjct: 353 GHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 412

Query: 236 VG-LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            G +VD+ ++ G + EA  +   MP    +  N VI G L  G
Sbjct: 413 YGCMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGG 451


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/579 (39%), Positives = 335/579 (57%), Gaps = 1/579 (0%)

Query: 194  NPNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
            NP+  T   ALK+ + +      G QLH   +K+   ++P V   L+ +YAKCG +  A+
Sbjct: 546  NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605

Query: 253  MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
             +F  MP  + + W  +I+ ++  G   EA  +    +  G+  D  T   VL + A   
Sbjct: 606  RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 665

Query: 313  AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
             +   + V   + +       ++  + +D Y KCG +  A ++F +    D VA  +M+ 
Sbjct: 666  DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 725

Query: 373  AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
             YA  G   EAL L+L MQ   + PD +  +  L+AC  L A + G+Q    +    F+ 
Sbjct: 726  GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 785

Query: 433  DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
            +   G +L++MYAKCGS  +A   F ++  + I+ W+AMI GL   G  K A  + GQM 
Sbjct: 786  NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 845

Query: 493  EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            + GV  N  T + +LC+C H GL+ + + +F +M K + I P  EHY CM+D+L RAG  
Sbjct: 846  KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 905

Query: 553  QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            QEA +LVD MP  ANA + GALLG  +I++N E+ +H  + L  +EP  S  +V+LSNIY
Sbjct: 906  QEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 965

Query: 613  ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
            ++ G W++ AK+R  MK   ++K P  SW+E + KV+ F VGD+SH  S +IY KLDE+ 
Sbjct: 966  SNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 1025

Query: 673  DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
              +   GY P  E  + DVE+ EKE  L HHSEKLA+AF L+ T PG TIRV KNLR+C 
Sbjct: 1026 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 1085

Query: 733  DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            DCHT+ + +S+I  REIIVRD NRFH FR+GSCSC  YW
Sbjct: 1086 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 214/459 (46%), Gaps = 48/459 (10%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G Q+H   +     ++  V  SL+ +YAKCG    ++R+FD +P  S V W +L + Y+ 
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 628

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              L EAV   +    +G+RP+ F+   ++ ACA   D   G  +   + + G    +F 
Sbjct: 629 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           A A VD+Y K G +  A  VF  + H D V+W A++ G   + H   AL LF  M++  +
Sbjct: 689 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 748

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKM----EIKSDPIVGVGLVDMYAKCGSMD 249
            P+ +    AL AC  +   +LGRQ     I+M    E   +P++G  L+DMYAKCGS  
Sbjct: 749 KPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 804

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           EA ++F  M +K++I WN +I G    G +  A +L   M + GV  +  T   +L    
Sbjct: 805 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL---- 860

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                  C   H   ++                     +  +  K++  S  ++   C  
Sbjct: 861 -------CSCTHTGLIQDGRR-----------------YFHNMTKLYHISPRIEHYGC-- 894

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+   ++ GL +EA +L   + D  +  ++ +  +LL  C       +  ++  H++K  
Sbjct: 895 MVDLLSRAGLLQEAHQL---VDDMPMPANAVILGALLGGC----KIHRNTELAEHVLKQL 947

Query: 430 FMSDTF-AGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
            + + + +GN   L N+Y+  G  +DA +   ++  +G+
Sbjct: 948 ILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGV 986



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 6/382 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H  S+KL   ++     +L+ +YAK G L  A  VF ++ HP  V W A+I   + 
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 628

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A+ + +   ++ + P+ FT    L ACA +     G  +  +  +  +     V
Sbjct: 629 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               VD+Y KCG M +AR +F  M  K+ +AW  ++ G+  NG   EA  LF  M  EG+
Sbjct: 689 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 748

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   ++  L +     A+ + +Q   +     F  +  +  +LID Y KCG   +A  
Sbjct: 749 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 808

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR--EINPDSFVCSSLLNACANL 412
           +F++    D++   +MI      G  + A  L  +M+    ++N ++F+   LL +C + 
Sbjct: 809 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFI--GLLCSCTHT 866

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              + G++   ++ K   +S        +V++ ++ G + +A +   ++P     V   A
Sbjct: 867 GLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 926

Query: 471 MIGGLAQHGRGKEALQMFGQML 492
           ++GG   H   + A  +  Q++
Sbjct: 927 LLGGCKIHRNTELAEHVLKQLI 948



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 15/283 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    DL  G  V       G     FVA + V +Y KCG    +R +FD +  + 
Sbjct: 657 VLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKD 716

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++   Y       EA+  F  M   G++P+ ++++  ++AC   G   LGR+   
Sbjct: 717 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ--- 773

Query: 121 YSIKLGYDSDMFSAN-----ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            +I++  D D F  N     AL+DMYAK G+  +A  VF+ +   DI+ WNA+I G  + 
Sbjct: 774 -AIRM-VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMT 831

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            H   A  L  QM+ S +  N  T+   L +C    L + GR+   ++ K+   S  I  
Sbjct: 832 GHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 891

Query: 236 VG-LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            G +VD+ ++ G + EA  +   MP    +  N VI G L  G
Sbjct: 892 YGCMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGG 930


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/579 (39%), Positives = 335/579 (57%), Gaps = 1/579 (0%)

Query: 194  NPNMFTYTSALKACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
            NP+  T   ALK+ + +      G QLH   +K+   ++P V   L+ +YAKCG +  A+
Sbjct: 522  NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 581

Query: 253  MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
             +F  MP  + + W  +I+ ++  G   EA  +    +  G+  D  T   VL + A   
Sbjct: 582  RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 641

Query: 313  AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
             +   + V   + +       ++  + +D Y KCG +  A ++F +    D VA  +M+ 
Sbjct: 642  DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 701

Query: 373  AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
             YA  G   EAL L+L MQ   + PD +  +  L+AC  L A + G+Q    +    F+ 
Sbjct: 702  GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 761

Query: 433  DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
            +   G +L++MYAKCGS  +A   F ++  + I+ W+AMI GL   G  K A  + GQM 
Sbjct: 762  NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 821

Query: 493  EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            + GV  N  T + +LC+C H GL+ + + +F +M K + I P  EHY CM+D+L RAG  
Sbjct: 822  KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 881

Query: 553  QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            QEA +LVD MP  ANA + GALLG  +I++N E+ +H  + L  +EP  S  +V+LSNIY
Sbjct: 882  QEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 941

Query: 613  ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
            ++ G W++ AK+R  MK   ++K P  SW+E + KV+ F VGD+SH  S +IY KLDE+ 
Sbjct: 942  SNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 1001

Query: 673  DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
              +   GY P  E  + DVE+ EKE  L HHSEKLA+AF L+ T PG TIRV KNLR+C 
Sbjct: 1002 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 1061

Query: 733  DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            DCHT+ + +S+I  REIIVRD NRFH FR+GSCSC  YW
Sbjct: 1062 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 214/459 (46%), Gaps = 48/459 (10%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G Q+H   +     ++  V  SL+ +YAKCG    ++R+FD +P  S V W +L + Y+ 
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
              L EAV   +    +G+RP+ F+   ++ ACA   D   G  +   + + G    +F 
Sbjct: 605 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
           A A VD+Y K G +  A  VF  + H D V+W A++ G   + H   AL LF  M++  +
Sbjct: 665 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 724

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKM----EIKSDPIVGVGLVDMYAKCGSMD 249
            P+ +    AL AC  +   +LGRQ     I+M    E   +P++G  L+DMYAKCGS  
Sbjct: 725 KPDCYAVAGALSACTRLGALDLGRQ----AIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 780

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           EA ++F  M +K++I WN +I G    G +  A +L   M + GV  +  T   +L    
Sbjct: 781 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL---- 836

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                  C   H   ++                     +  +  K++  S  ++   C  
Sbjct: 837 -------CSCTHTGLIQDGRR-----------------YFHNMTKLYHISPRIEHYGC-- 870

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+   ++ GL +EA +L   + D  +  ++ +  +LL  C       +  ++  H++K  
Sbjct: 871 MVDLLSRAGLLQEAHQL---VDDMPMPANAVILGALLGGC----KIHRNTELAEHVLKQL 923

Query: 430 FMSDTF-AGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
            + + + +GN   L N+Y+  G  +DA +   ++  +G+
Sbjct: 924 ILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGV 962



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 6/382 (1%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H  S+KL   ++     +L+ +YAK G L  A  VF ++ HP  V W A+I   + 
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A+ + +   ++ + P+ FT    L ACA +     G  +  +  +  +     V
Sbjct: 605 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               VD+Y KCG M +AR +F  M  K+ +AW  ++ G+  NG   EA  LF  M  EG+
Sbjct: 665 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 724

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   ++  L +     A+ + +Q   +     F  +  +  +LID Y KCG   +A  
Sbjct: 725 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 784

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR--EINPDSFVCSSLLNACANL 412
           +F++    D++   +MI      G  + A  L  +M+    ++N ++F+   LL +C + 
Sbjct: 785 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFI--GLLCSCTHT 842

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
              + G++   ++ K   +S        +V++ ++ G + +A +   ++P     V   A
Sbjct: 843 GLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 902

Query: 471 MIGGLAQHGRGKEALQMFGQML 492
           ++GG   H   + A  +  Q++
Sbjct: 903 LLGGCKIHRNTELAEHVLKQLI 924



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 15/283 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    DL  G  V       G     FVA + V +Y KCG    +R +FD +  + 
Sbjct: 633 VLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKD 692

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W ++   Y       EA+  F  M   G++P+ ++++  ++AC   G   LGR+   
Sbjct: 693 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ--- 749

Query: 121 YSIKLGYDSDMFSAN-----ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            +I++  D D F  N     AL+DMYAK G+  +A  VF+ +   DI+ WNA+I G  + 
Sbjct: 750 -AIRM-VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMT 807

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            H   A  L  QM+ S +  N  T+   L +C    L + GR+   ++ K+   S  I  
Sbjct: 808 GHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 867

Query: 236 VG-LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            G +VD+ ++ G + EA  +   MP    +  N VI G L  G
Sbjct: 868 YGCMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGG 906


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/657 (37%), Positives = 373/657 (56%), Gaps = 31/657 (4%)

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           +L+ A++VF  I  P+    N  +      E  +  L ++++M++  +  + F++   LK
Sbjct: 71  SLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLK 130

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           A + ++    G ++H    K+   SDP V  GLV MYA CG + EAR++F  M  ++++ 
Sbjct: 131 ALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVT 190

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           W+I+I G+ Q+G   +A  LF  M    V  D+  LSTVL +      +   K +H   +
Sbjct: 191 WSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIM 250

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE---- 381
           +     D ++ ++L+  Y  CG ++ A+ +F++ +  +LVA T+M+T Y++ G  E    
Sbjct: 251 ENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARS 310

Query: 382 ---------------------------EALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                                      EAL L+ EMQ   I PD     S++ ACA+L A
Sbjct: 311 VFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGA 370

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            +Q K +H+ + K GF       N+L+ MYAKCGS++ A R F ++P + ++SW+ MI  
Sbjct: 371 LDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISA 430

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A HG    AL+ F QM ++ + PN IT V VL AC+HAGLV E +  F SM  +  I P
Sbjct: 431 FAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITP 490

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
              HY CM+D+ GRA   +EA+ELV+ MP   N  +WG+L+ A R++  +E+G+ AA+ L
Sbjct: 491 KHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRL 550

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
             ++P+    HV LSNIYA A  W++V +VR+ MK   + KE G S  E+ ++++ F V 
Sbjct: 551 LELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVA 610

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           DRSH  + EIY KL EV   L   GY P   + L D+EE EK++++  HSEKLA+ +GL+
Sbjct: 611 DRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLM 670

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
               G+ IR+ KNLR+C DCHT  +  SK+  REI+VRD  RFHH+++G CSC  YW
Sbjct: 671 RDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 234/499 (46%), Gaps = 36/499 (7%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAIPERSVVSWNSLFSCYVHC 74
           QVH  ++ +  D    +   LV+      + +D +  +F+ IP+      N         
Sbjct: 41  QVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRS 100

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
           +  E+ +  ++ M   G+  + FS   ++ A +     + G +IHG + KLG+DSD F  
Sbjct: 101 EEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQ 160

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG-CVLHEHNDWALKLFQQMKSSEI 193
             LV MYA  G + +A  +F  + H D+V+W+ +I G C     ND AL LF++MK+  +
Sbjct: 161 TGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFND-ALLLFEEMKNYNV 219

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD---- 249
            P+    ++ L AC        G+ +H  +++  I  DP +   LV MYA CGSMD    
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279

Query: 250 ---------------------------EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
                                       AR +F+ M +K+L+ W+ +ISG+ ++    EA
Sbjct: 280 LFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEA 339

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
            +LF  M   G+  DQ T+ +V+ + A   A+   K +H    K  F     I N+LI+ 
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEM 399

Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
           Y KCG +E A +IF +    ++++ T MI+A+A  G    AL+ + +M+D  I P+    
Sbjct: 400 YAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITF 459

Query: 403 SSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
             +L AC++    E+G+++   +I +            +V+++ +   + +A      +P
Sbjct: 460 VGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMP 519

Query: 462 -DRGIVSWSAMIGGLAQHG 479
               ++ W +++     HG
Sbjct: 520 LAPNVIIWGSLMAACRVHG 538



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 212/434 (48%), Gaps = 41/434 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA +  K L  GL++HG+    GFDSD FV   LV MYA CG   ++R +FD +  R 
Sbjct: 128 LLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRD 187

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W+ +   Y       +A+  F+EM    + P+E  LS++++AC  +G+   G+ IH 
Sbjct: 188 VVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHD 247

Query: 121 Y------------------------SIKLGYD-------SDMFSANALVDMYAKVGNLED 149
           +                        S+ L  +        ++ ++ A+V  Y+K+G +E+
Sbjct: 248 FIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIEN 307

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A +VF  +   D+V W+A+I+G    +    AL LF +M+S  I P+  T  S + ACA 
Sbjct: 308 ARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAH 367

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +   +  + +H  + K        +   L++MYAKCGS++ AR IF  MP KN+I+W  +
Sbjct: 368 LGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCM 427

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           IS    +G    A   F  M  E +  +  T   VL + +    +   +++    +    
Sbjct: 428 ISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHN 487

Query: 330 ESDDYI-VNSLIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITA---YAQFGLGEEAL 384
            +  ++    ++D +G+   + +A+++ +    A +++   S++ A   + +  LGE A 
Sbjct: 488 ITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAA 547

Query: 385 KLYLEMQDREINPD 398
           K  LE+     +PD
Sbjct: 548 KRLLEL-----DPD 556


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/765 (33%), Positives = 416/765 (54%), Gaps = 13/765 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  V+ +G+    F++N L+ MYA+  +  D+  L D +P R+ VSWN++      
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQ 90

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                 ++ FF+ M+  G  P+     S+I A    G    G  +  ++ K G+D     
Sbjct: 91  AGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGTIQEGEIVQDFAKKSGFDRSFVV 147

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             AL+ MY + G L+ A   F  I+   +VSWNA+I      +  + +L++F++M    I
Sbjct: 148 GTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGI 207

Query: 194 NPNMFTYTSALKACAGMELK--ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            PN  T      A AG+  K    G  +H   I   + S   V   +++++ + G++  A
Sbjct: 208 APNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRA 267

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             IF  + ++++ +WN +I+   +NG   EA  L+  M    +  D  T   VL++    
Sbjct: 268 NEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT---IRPDGVTFVNVLEACDCP 324

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
             +   + +H  +    ++SD  +  +L+  Y +CG ++ A ++F       ++   ++I
Sbjct: 325 DDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAII 384

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGF 430
            A+AQFG  + +L  + +M    I P  F   ++L ACA   A     + +H  + +   
Sbjct: 385 AAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPG 444

Query: 431 ---MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
                D    N+LVNMYAKCG +D A   F   P   + +W+A++ G AQHG    A+++
Sbjct: 445 DCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRL 504

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
             +M   G+ P+ I+  + L A +HA  V +    F ++ + +G+ P  EHY  ++D+LG
Sbjct: 505 LYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLG 564

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           RAG  +EA   + +M   A+A+ W ALLGA RI+K+ +    AAE + AI+P   +++ +
Sbjct: 565 RAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTV 624

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN+Y++AG WD   ++RR M +N  +KEPG SWIEVK++V+ F V DRSH R+ EIY +
Sbjct: 625 LSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYER 684

Query: 668 LDEVSDLL-NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           LDE+  +L ++  YVP V + LHDVE+  +E LL+HHSEKLA+ FGLI T  G+ I + K
Sbjct: 685 LDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIK 744

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLRIC DCH   +  SK   REI+VRD  RFHHF  G+CSC   W
Sbjct: 745 NLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 137/263 (52%), Gaps = 5/263 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC    DL  G  +H      G+DSD  VA +LV MY +CG    +  +F AI    
Sbjct: 317 VLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPG 376

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI-NACAGSGDSLLGRKIH 119
           V++ N++ + +      + ++  F++M+  GIRP++F+L +++         +  GR +H
Sbjct: 377 VITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLH 436

Query: 120 GYSIKLGYD---SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +  +   D    D+   NALV+MYAK G+L+ A  +F      ++ +WNA++AG   H 
Sbjct: 437 RWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHG 496

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           + D A++L  +M+ + I+P+  ++T+AL A +     E G ++  ++ +       +   
Sbjct: 497 YADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHY 556

Query: 237 G-LVDMYAKCGSMDEARMIFHLM 258
           G +VD+  + G ++EA      M
Sbjct: 557 GAVVDLLGRAGWLEEAEGFLRSM 579



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 5/163 (3%)

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           ++ +QG+++H  +I+ G+    F  N L++MYA+  S  DA+     +P R  VSW+A+I
Sbjct: 26  TSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVI 85

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
              AQ G    +L  F +ML+DG +P+ +  +S++ A    G + E +   +   KK G 
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGTIQEGE-IVQDFAKKSGF 141

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                    +I + GR G+   A +  D +  +   S W AL+
Sbjct: 142 DRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVS-WNALI 183


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/713 (35%), Positives = 423/713 (59%), Gaps = 3/713 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC   +D+  G ++H ++V  GF+S  F+ N+LV MYAK  +   ++RLFDA  E+ 
Sbjct: 168 LLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKG 227

Query: 61  -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V WNS+ S Y       E +  F+EM ++G   N +++ S + AC G   + LG++IH
Sbjct: 228 DAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIH 287

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
              +K  +  +++  NAL+ MYA+ G + +A  + + + + D+V+WN++I G V +    
Sbjct: 288 AAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYK 347

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+ F  M ++   P+  + TS + A   +     G +LH  +IK    S+ +VG  L+
Sbjct: 348 EALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLI 407

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMY+KC         F +M EK+LI+W  +I+G+  N   +EA  LF  + ++ +  D+ 
Sbjct: 408 DMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEM 467

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
            L ++L++ +  +++ + K++H   ++     D  I N L+D YGKC ++  A ++F+  
Sbjct: 468 MLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESI 526

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+ TSMI++ A  G   EA++L+  M +  +  DS     +L+A A+LSA ++G+
Sbjct: 527 KGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGR 586

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H ++++ GF  +     ++V+MYA CG +  A   F  I  +G++ +++MI     HG
Sbjct: 587 EIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG 646

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            GK ++++F +M  + V P+HI+ +++L AC+HAGL+ E +   + ME ++ ++P  EHY
Sbjct: 647 CGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHY 706

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            C++D+LGRA    EA E V  M  +    VW ALL A R +   E+G+ AA+ L  +EP
Sbjct: 707 VCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEP 766

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           +     VL+SN++A  G W++V KVR  MK + ++K PG SWIE+  KV+ FT  D+SH 
Sbjct: 767 KNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHP 826

Query: 660 RSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
            +KEIY KL EV+  L + +GY+   +  LH+V+E EK Q+L+ HSE+LA+A+
Sbjct: 827 ETKEIYEKLSEVTRKLERESGYLADTKFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 245/461 (53%), Gaps = 2/461 (0%)

Query: 47  IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINAC 106
           +   ++FD + +R+  +WN+L   YV       A+  ++ M + G+  + +S   ++ AC
Sbjct: 113 LSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKAC 172

Query: 107 AGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK-DIEHPDIVSW 165
               D   G ++H   +KLG++S  F  NALV MYAK  +L  A  +F    E  D V W
Sbjct: 173 GKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLW 232

Query: 166 NAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK 225
           N++++       +   L+LF++M+ +    N +T  SAL AC G    +LG+++H +++K
Sbjct: 233 NSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLK 292

Query: 226 MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASL 285
                +  V   L+ MYA+CG M EA  I  LM   +++ WN +I G++QN    EA   
Sbjct: 293 STHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQF 352

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M   G   D+ +L++V+ +      +    ++HA  +K  ++S+  + N+LID Y K
Sbjct: 353 FCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSK 412

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           C       + F      DL++ T++I  YA      EAL+L+ ++  + +  D  +  S+
Sbjct: 413 CNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSI 472

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           L AC+ L +    K++H HI++ G + DT   N LV++Y KC ++  A R F  I  + +
Sbjct: 473 LRACSVLKSMLIVKEIHCHILRKGLI-DTVIQNELVDVYGKCRNMGYASRVFESIKGKDV 531

Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           VSW++MI   A +G   EA+++F +M E G+L + + L+ +
Sbjct: 532 VSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCI 572


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 369/670 (55%), Gaps = 38/670 (5%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++ AC  S      +KIH + +K   ++D    + L  +Y     +  A  +F +I +P 
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           ++ WN +I     +   D A+ L+  M    + PN +TY   LKAC+G+   E G ++H 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
                 ++SD  V   LVD YAKCG + EA+ +F  M  ++++AWN +I+G    G   +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID 341
           A  L   M  EG+  + +T+  VL +                                  
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPT---------------------------------- 219

Query: 342 AYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFV 401
               C  +  A KIF      + V+ ++MI  Y      +EAL ++  MQ   I+PD   
Sbjct: 220 ----CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTT 275

Query: 402 CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
              +L AC++L+A + G   H ++I  GF +DT   N+L++MY+KCG I  A   F+ + 
Sbjct: 276 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 335

Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
              IVSW+AMI G   HG G EAL +F  +L  G+ P+ IT + +L +C+H+GLV E + 
Sbjct: 336 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 395

Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
            F++M + F I P  EH  CM+DILGRAG   EA   +  MPF+ +  +W ALL A RI+
Sbjct: 396 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 455

Query: 582 KNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
           KN+E+G+  ++ + ++ PE +   VLLSNIY++AG WD+ A +R   KD  LKK PG SW
Sbjct: 456 KNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSW 515

Query: 642 IEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY 701
           IE+   V+ F  GD+SH +  +I  KL+E+   + + GY         DVEE EKEQ+L 
Sbjct: 516 IEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILL 575

Query: 702 HHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFR 761
           +HSEKLA+AFG++    G  I V KNLR+C DCHT+ +F++ I  REI VRD NRFHHF+
Sbjct: 576 YHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFK 635

Query: 762 NGSCSCGGYW 771
           NG+C+CG +W
Sbjct: 636 NGTCNCGDFW 645



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 229/488 (46%), Gaps = 56/488 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC   K L    ++H   +    ++D  V + L  +Y  C   + +RRLFD IP  S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+ WN +   Y      + A+  +  M+  G+RPN+++   ++ AC+G      G +IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           ++   G +SD+F   ALVD YAK G L +A  +F  + H D+V+WNA+IAGC L+   D 
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L  QM+   I PN                                 S  IVGV    
Sbjct: 194 AVQLIMQMQEEGICPN---------------------------------SSTIVGV---- 216

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
               C  +  AR IF +M  +N ++W+ +I G++ +    EA  +F  M   G+  D TT
Sbjct: 217 -LPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTT 275

Query: 301 LSTVLKSVASFQAI--GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           +  VL + +   A+  G C   H   +   F +D  I N+LID Y KCG +  A ++F  
Sbjct: 276 MLGVLPACSHLAALQHGFCS--HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 333

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               D+V+  +MI  Y   GLG EAL L+ ++    + PD      LL++C++     +G
Sbjct: 334 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 393

Query: 419 KQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSA 470
           +      + F  MS  F+          +V++  + G ID+A      +P +  +  WSA
Sbjct: 394 R------LWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 447

Query: 471 MIGGLAQH 478
           ++     H
Sbjct: 448 LLSACRIH 455



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 44/379 (11%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
            Y   L+AC   +     +++H   +K    +D  V   L  +Y  C  +  AR +F  +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P  ++I WN +I  +  NG    A  L+  M   GV  ++ T   VLK+ +   AI    
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H+ +     ESD ++  +L+D Y KCG + +A ++F   S  D+VA  +MI   + +G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           L ++A++L ++MQ+  I P+S     +L  C  L                          
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL-------------------------- 223

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
               +YA+        + F  +  R  VSWSAMIGG       KEAL +F  M   G+ P
Sbjct: 224 ----LYAR--------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDP 271

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAM 556
           +  T++ VL AC+H   +A  +H F S           +   C  +ID+  + GK   A 
Sbjct: 272 DLTTMLGVLPACSH---LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 328

Query: 557 ELVDTMPFQANASVWGALL 575
           E+ + M      S W A++
Sbjct: 329 EVFNRMDRHDIVS-WNAMI 346



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 102/192 (53%), Gaps = 2/192 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G   HG ++  GF +D  + N+L+ MY+KCG    +R +F+ +    
Sbjct: 279 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 338

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           +VSWN++   Y       EA+  F +++  G++P++ +   ++++C+ SG  + GR    
Sbjct: 339 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 398

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
             S        M     +VD+  + G +++A    +++   PD+  W+A+++ C +H++ 
Sbjct: 399 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 458

Query: 179 DWALKLFQQMKS 190
           +   ++ ++++S
Sbjct: 459 ELGEEVSKKIQS 470


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/680 (35%), Positives = 399/680 (58%), Gaps = 3/680 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L A  + K    G Q+H   V  G D++ FV +SL+ +YAKCG   D++ +FD   E++
Sbjct: 331  MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 390

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V WN++ + +V  +  EEA+  F+ M+   ++ +EF+  S++ AC       LG+++H 
Sbjct: 391  IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +IK   D  +F ANA +DMY+K G + DA A+F  I + D +SWNA+  G   +   + 
Sbjct: 451  VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A+ + ++M+   I P+  ++++A+ AC+ +   E G+Q+HC  IK  I S+  VG  L+D
Sbjct: 511  AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            +Y+K G ++ +R IF  +   +++  N +I+G +QN  + EA  LF  + ++G+     T
Sbjct: 571  LYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVT 630

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-SLIDAYGKCGHVEDAVKIFKE- 358
             S++L   +      + KQVH  ++K+    DD ++  SL   Y K   +EDA K+  E 
Sbjct: 631  FSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEM 690

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +L   T++I+ YAQ G G+ +L  +  M+   +  D    +S+L AC++++A+  G
Sbjct: 691  PDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADG 750

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
            K++H  I K GF S   A ++L++MY+KCG +  +  AF E+ ++  I+ W++MI G A+
Sbjct: 751  KEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAK 810

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G   EAL +F +M E  + P+ +T + VL AC H+GL++E +H F SM K +G+ P  +
Sbjct: 811  NGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLD 870

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            HYAC ID+LGR G  QEA E +D +PF+ +  VW   L A R++K+ E G+ AA  L  +
Sbjct: 871  HYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVEL 930

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP+ SST+VLLS+++A+ G W      R  M++  + K PG SWI V +K   F V D+ 
Sbjct: 931  EPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKY 990

Query: 658  HARSKEIYAKLDEVSDLLNK 677
            H  +  IY  L +++ ++ K
Sbjct: 991  HPDNLRIYEMLGDLTGMMKK 1010



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 174/593 (29%), Positives = 295/593 (49%), Gaps = 44/593 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G QVH  VV +GF S  F   +LV MYAKCG+  ++RR+FD I    
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + W+S+ +CY      +EA+  F  M   G  P++ +L ++I+  A S           
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASS----------- 272

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                   G L+ A A+ K +  P  V+WNAVI+G         
Sbjct: 273 ------------------------GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L L++ M+S  + P   T+ S L A A M+    G+Q+H + +   + ++  VG  L++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG   +A+ +F L  EKN++ WN +++G +QN    EA  +F +M R  +  D+ T
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 428

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L +     +  + KQVH +++K   +   ++ N+ +D Y K G + DA  +F    
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 488

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D ++  ++    AQ    EEA+ +   M+   I PD    S+ +NAC+N+ A E GKQ
Sbjct: 489 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQ 548

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   IK+G  S+   G+SL+++Y+K G ++ + + F+++    IV  +A+I G  Q+  
Sbjct: 549 IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN 608

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             EA+Q+F Q+L+DG+ P+ +T  S+L  C+   L +           K G+  + +   
Sbjct: 609 EDEAIQLFQQVLKDGLKPSSVTFSSILSGCS-GSLNSAIGKQVHCYTLKSGV--LYDDTL 665

Query: 541 CMIDILG---RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
             + + G   ++   ++A +L+  MP   N   W A++     Y     G H+
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG---YAQNGYGDHS 715



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 281/551 (50%), Gaps = 10/551 (1%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           G   D+    +++   A  G    +  L   +P  S V+WN++ S +         +  +
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 313

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           K+M   G+ P   + +SM++A A     + G+++H  ++  G D+++F  ++L+++YAK 
Sbjct: 314 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G   DA  VF      +IV WNA++ G V +E  + A+++FQ M    +  + FT+ S L
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            AC  +    LG+Q+HC  IK  +     V    +DMY+K G++ +A+ +F L+P K+ I
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 493

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +WN +  G  QN  + EA  +   M   G+  D  + ST + + ++ +A    KQ+H L+
Sbjct: 494 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 553

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K    S+  + +SLID Y K G VE + KIF +  A  +V   ++I  + Q    +EA+
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAI 613

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNM 443
           +L+ ++    + P S   SS+L+ C+       GKQVH + +K G +  DT  G SL  +
Sbjct: 614 QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 673

Query: 444 YAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           Y K   ++DA++  +E+PD + +  W+A+I G AQ+G G  +L  F +M    V  +  T
Sbjct: 674 YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 733

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG-------KFQEA 555
             SVL AC+     A+ K     +  K G    +   + +ID+  + G        F+E 
Sbjct: 734 FASVLKACSDVTAFADGK-EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792

Query: 556 MELVDTMPFQA 566
               D MP+ +
Sbjct: 793 KNKQDIMPWNS 803



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 181/382 (47%), Gaps = 39/382 (10%)

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+ F     L AC+ + +   GRQ+HC ++K    S       LVDMYAKCG +  AR 
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  +   + I W+ +I+ + + G   EA +LF  M + G   DQ TL T++ ++AS   
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS--- 271

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
                                            G ++ A  + K+      VA  ++I+ 
Sbjct: 272 --------------------------------SGRLDHATALLKKMPTPSTVAWNAVISG 299

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           +AQ GL    L LY +M+   + P     +S+L+A AN+ A+ +G+Q+H   +  G  ++
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F G+SL+N+YAKCG   DA   F    ++ IV W+AM+ G  Q+   +EA++MF  M+ 
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             +  +  T VS+L AC +       K  H  +++    I     +    +D+  + G  
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN--ATLDMYSKYGAI 477

Query: 553 QEAMELVDTMPFQANASVWGAL 574
            +A  L   +P++ + S W AL
Sbjct: 478 GDAKALFSLIPYKDSIS-WNAL 498



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 12/307 (3%)

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
            C+ +H   ++        + +SL++ Y K G V  A      +      A +S+++ +A
Sbjct: 74  TCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 133

Query: 376 QFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           + G   + L  +  ++      PD F  + +L+AC+ +     G+QVH  ++K GF S  
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F   +LV+MYAKCG + +A R F  I     + WS+MI    + G  +EAL +F +M + 
Sbjct: 194 FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM 253

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G  P+ +TLV+++     +G +  A    + M       P    +  +I    ++G    
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMP-----TPSTVAWNAVISGHAQSGLEFN 308

Query: 555 AMELVDTMP---FQANASVWGALLGAARIYKNVEVGQ--HAAEMLFAIEPEKSSTHVLLS 609
            + L   M         S + ++L AA   K    GQ  HAA ++  ++        L+ 
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLI- 367

Query: 610 NIYASAG 616
           N+YA  G
Sbjct: 368 NLYAKCG 374


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/680 (35%), Positives = 399/680 (58%), Gaps = 3/680 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L A  + K    G Q+H   V  G D++ FV +SL+ +YAKCG   D++ +FD   E++
Sbjct: 341  MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 400

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V WN++ + +V  +  EEA+  F+ M+   ++ +EF+  S++ AC       LG+++H 
Sbjct: 401  IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 460

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +IK   D  +F ANA +DMY+K G + DA A+F  I + D +SWNA+  G   +   + 
Sbjct: 461  VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 520

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A+ + ++M+   I P+  ++++A+ AC+ +   E G+Q+HC  IK  I S+  VG  L+D
Sbjct: 521  AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 580

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            +Y+K G ++ +R IF  +   +++  N +I+G +QN  + EA  LF  + ++G+     T
Sbjct: 581  LYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVT 640

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-SLIDAYGKCGHVEDAVKIFKE- 358
             S++L   +      + KQVH  ++K+    DD ++  SL   Y K   +EDA K+  E 
Sbjct: 641  FSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEM 700

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +L   T++I+ YAQ G G+ +L  +  M+   +  D    +S+L AC++++A+  G
Sbjct: 701  PDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADG 760

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
            K++H  I K GF S   A ++L++MY+KCG +  +  AF E+ ++  I+ W++MI G A+
Sbjct: 761  KEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAK 820

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G   EAL +F +M E  + P+ +T + VL AC H+GL++E +H F SM K +G+ P  +
Sbjct: 821  NGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLD 880

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            HYAC ID+LGR G  QEA E +D +PF+ +  VW   L A R++K+ E G+ AA  L  +
Sbjct: 881  HYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVEL 940

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP+ SST+VLLS+++A+ G W      R  M++  + K PG SWI V +K   F V D+ 
Sbjct: 941  EPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKY 1000

Query: 658  HARSKEIYAKLDEVSDLLNK 677
            H  +  IY  L +++ ++ K
Sbjct: 1001 HPDNLRIYEMLGDLTGMMKK 1020



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 174/593 (29%), Positives = 295/593 (49%), Gaps = 44/593 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G QVH  VV +GF S  F   +LV MYAKCG+  ++RR+FD I    
Sbjct: 174 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 233

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + W+S+ +CY      +EA+  F  M   G  P++ +L ++I+  A S           
Sbjct: 234 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASS----------- 282

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                   G L+ A A+ K +  P  V+WNAVI+G         
Sbjct: 283 ------------------------GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L L++ M+S  + P   T+ S L A A M+    G+Q+H + +   + ++  VG  L++
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 378

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG   +A+ +F L  EKN++ WN +++G +QN    EA  +F +M R  +  D+ T
Sbjct: 379 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 438

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L +     +  + KQVH +++K   +   ++ N+ +D Y K G + DA  +F    
Sbjct: 439 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 498

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D ++  ++    AQ    EEA+ +   M+   I PD    S+ +NAC+N+ A E GKQ
Sbjct: 499 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQ 558

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   IK+G  S+   G+SL+++Y+K G ++ + + F+++    IV  +A+I G  Q+  
Sbjct: 559 IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN 618

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             EA+Q+F Q+L+DG+ P+ +T  S+L  C+   L +           K G+  + +   
Sbjct: 619 EDEAIQLFQQVLKDGLKPSSVTFSSILSGCS-GSLNSAIGKQVHCYTLKSGV--LYDDTL 675

Query: 541 CMIDILG---RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
             + + G   ++   ++A +L+  MP   N   W A++     Y     G H+
Sbjct: 676 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG---YAQNGYGDHS 725



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 281/551 (50%), Gaps = 10/551 (1%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           G   D+    +++   A  G    +  L   +P  S V+WN++ S +         +  +
Sbjct: 264 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 323

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           K+M   G+ P   + +SM++A A     + G+++H  ++  G D+++F  ++L+++YAK 
Sbjct: 324 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 383

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G   DA  VF      +IV WNA++ G V +E  + A+++FQ M    +  + FT+ S L
Sbjct: 384 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 443

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            AC  +    LG+Q+HC  IK  +     V    +DMY+K G++ +A+ +F L+P K+ I
Sbjct: 444 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 503

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +WN +  G  QN  + EA  +   M   G+  D  + ST + + ++ +A    KQ+H L+
Sbjct: 504 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 563

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K    S+  + +SLID Y K G VE + KIF +  A  +V   ++I  + Q    +EA+
Sbjct: 564 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAI 623

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNM 443
           +L+ ++    + P S   SS+L+ C+       GKQVH + +K G +  DT  G SL  +
Sbjct: 624 QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 683

Query: 444 YAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           Y K   ++DA++  +E+PD + +  W+A+I G AQ+G G  +L  F +M    V  +  T
Sbjct: 684 YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 743

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG-------KFQEA 555
             SVL AC+     A+ K     +  K G    +   + +ID+  + G        F+E 
Sbjct: 744 FASVLKACSDVTAFADGK-EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 802

Query: 556 MELVDTMPFQA 566
               D MP+ +
Sbjct: 803 KNKQDIMPWNS 813



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 215/465 (46%), Gaps = 45/465 (9%)

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           +L GR + G S  LG   D     +LV++Y K G +  A +           + +++++ 
Sbjct: 87  ALHGRILRGGSPLLGRLGD-----SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 141

Query: 172 CVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
                     L  F+ ++ ++   P+ F     L AC+ + +   GRQ+HC ++K    S
Sbjct: 142 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 201

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                  LVDMYAKCG +  AR +F  +   + I W+ +I+ + + G   EA +LF  M 
Sbjct: 202 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 261

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           + G   DQ TL T++ ++AS                                    G ++
Sbjct: 262 KMGSAPDQVTLVTIISTLAS-----------------------------------SGRLD 286

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A  + K+      VA  ++I+ +AQ GL    L LY +M+   + P     +S+L+A A
Sbjct: 287 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 346

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           N+ A+ +G+Q+H   +  G  ++ F G+SL+N+YAKCG   DA   F    ++ IV W+A
Sbjct: 347 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 406

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKK 529
           M+ G  Q+   +EA++MF  M+   +  +  T VS+L AC +       K  H  +++  
Sbjct: 407 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC 466

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
             I     +    +D+  + G   +A  L   +P++ + S W AL
Sbjct: 467 MDISLFVAN--ATLDMYSKYGAIGDAKALFSLIPYKDSIS-WNAL 508



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 12/307 (3%)

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
            C+ +H   ++        + +SL++ Y K G V  A      +      A +S+++ +A
Sbjct: 84  TCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 143

Query: 376 QFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           + G   + L  +  ++      PD F  + +L+AC+ +     G+QVH  ++K GF S  
Sbjct: 144 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 203

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F   +LV+MYAKCG + +A R F  I     + WS+MI    + G  +EAL +F +M + 
Sbjct: 204 FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM 263

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G  P+ +TLV+++     +G +  A    + M       P    +  +I    ++G    
Sbjct: 264 GSAPDQVTLVTIISTLASSGRLDHATALLKKMP-----TPSTVAWNAVISGHAQSGLEFN 318

Query: 555 AMELVDTMP---FQANASVWGALLGAARIYKNVEVGQ--HAAEMLFAIEPEKSSTHVLLS 609
            + L   M         S + ++L AA   K    GQ  HAA ++  ++        L+ 
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLI- 377

Query: 610 NIYASAG 616
           N+YA  G
Sbjct: 378 NLYAKCG 384


>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
 gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
          Length = 703

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/654 (38%), Positives = 372/654 (56%), Gaps = 16/654 (2%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDI 157
           L++   +   S    LGR  H  +++L   +   F    LV++Y+K+     A A     
Sbjct: 18  LAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASD 77

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE-LG 216
            HP +VS+ A I+G   H     AL  F  M    + PN FT+ SA KA A    +  +G
Sbjct: 78  PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137

Query: 217 RQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
            Q+H   I+   +  DP V    +DMY K G +  AR +F  MP +N++AWN V++  + 
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA------IGVCKQVHALSVKTAF 329
           +G  +E    + +  RE  G     L  V+ + A F A      + + +Q H   VK  F
Sbjct: 198 DGRPLETIEAY-FGLREAGG-----LPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGF 251

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           E D  ++NS++D YGKC     A  +F      + V+  SM+ AYAQ G  EEA   YL 
Sbjct: 252 EMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLG 311

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
            +     P  F+ SS L  CA L     G+ +H   ++    ++ F  ++LV+MY KCG 
Sbjct: 312 ARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGC 371

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLC 508
           ++DA++ F E P R +V+W+AMIGG A  G  + AL +F  M+  G   PN+ITLV+V+ 
Sbjct: 372 VEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVIT 431

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           +C+  GL  +    FE+M ++FGI+P  EHYAC++D+LGRAG  ++A E++  MP + + 
Sbjct: 432 SCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSI 491

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           SVWGALLGA +++   E+G+ AAE LF ++P+ S  HVLLSN++ASAG W     +R+ M
Sbjct: 492 SVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEM 551

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K+  +KK+PG SW+  K+ V+ F   D  H    EI A L ++   +  AGY+P  +  L
Sbjct: 552 KNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSL 611

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
           +D+EE EKE  ++ HSEKLA+AFGLI  PPG  IR+ KNLRICVDCH +F+FIS
Sbjct: 612 YDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFIS 665



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 253/512 (49%), Gaps = 15/512 (2%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           F+   LV +Y+K      +     + P  +VVS+ +  S          A+  F  M+  
Sbjct: 52  FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111

Query: 91  GIRPNEFSLSSMINACAGSGD-SLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLE 148
           G+RPN+F+  S   A A +   S +G +IH  +I+ GY   D F + A +DMY K G L+
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F ++ + ++V+WNAV+   VL       ++ +  ++ +   PN+ +  +   ACA
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G     LG Q H  ++K   + D  V   +VD Y KC    +AR +F  M  +N ++W  
Sbjct: 232 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 291

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +++ + QNG + EA + +    R G       +S+ L + A    + + + +HA++V++ 
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
            +++ ++ ++L+D YGKCG VEDA +IF E+   +LV   +MI  YA  G  + AL ++ 
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411

Query: 389 EM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
           +M +  E  P+     +++ +C+     + G ++   +  +FG    T     +V++  +
Sbjct: 412 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 471

Query: 447 CGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGK----EALQMFGQMLEDGVLPNHI 501
            G  + A      +P R  +S W A++G    HG+ +     A ++F    +D    NH+
Sbjct: 472 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDS--GNHV 529

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            L ++  +   AG  AEA    + M K  GI+
Sbjct: 530 LLSNMFAS---AGRWAEATDIRKEM-KNVGIK 557



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 210/458 (45%), Gaps = 42/458 (9%)

Query: 13  LGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           +G Q+H + +  G+   D FV+ + + MY K G    +R LF  +P R+VV+WN++ +  
Sbjct: 136 IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 195

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
           V      E +  +  +  +G  PN  S  +  NACAG+    LG + HG+ +K G++ D+
Sbjct: 196 VLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDV 255

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
              N++VD Y K      A AVF  +   + VSW +++A    +   + A   +   + S
Sbjct: 256 SVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRS 315

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
              P  F  +SAL  CAG+    LGR LH   ++  I ++  V   LVDMY KCG +++A
Sbjct: 316 GEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDA 375

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVAS 310
             IF+  P++NL+ WN +I G+   G    A  +F  M R G    +  TL  V+ S + 
Sbjct: 376 EQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS- 434

Query: 311 FQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                          +     D Y +  ++ + +G    +E   + +  +  VDL+    
Sbjct: 435 ---------------RGGLTKDGYELFETMRERFG----IEPRTEHY--ACVVDLL---- 469

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
                 + G+ E+A   Y  +Q   + P   V  +LL AC      E G+   +   K  
Sbjct: 470 -----GRAGMEEQA---YEVIQGMPMRPSISVWGALLGACKMHGKTELGR---IAAEKLF 518

Query: 430 FMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
            +    +GN   L NM+A  G   +A     E+ + GI
Sbjct: 519 ELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGI 556



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 11/294 (3%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
             AC     L LG Q HG VV  GF+ D  V NS+V  Y KC     +R +FD +  R+ 
Sbjct: 227 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 286

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW S+ + Y      EEA   +     SG  P +F +SS +  CAG     LGR +H  
Sbjct: 287 VSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAV 346

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
           +++   D+++F A+ALVDMY K G +EDA  +F +    ++V+WNA+I G         A
Sbjct: 347 AVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNA 406

Query: 182 LKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSL---IKMEIKSDPIVGVG 237
           L +F  M +S E  PN  T  + + +C+   L + G +L  ++     +E +++    V 
Sbjct: 407 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACV- 465

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIA-WNIVISGHLQNG----GDMEAASLF 286
            VD+  + G  ++A  +   MP +  I+ W  ++     +G    G + A  LF
Sbjct: 466 -VDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLF 518


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/643 (36%), Positives = 373/643 (58%), Gaps = 4/643 (0%)

Query: 133 SANALVDMYAKVGNLE--DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           S N L+     +G+L    A +VF      D+++WN+++   V       AL+ + +M  
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71

Query: 191 SEIN-PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              N P+ FT+ S LK CA +   ++G+ LH  ++K  + SD  +   L++MYA CG + 
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR +F  M  +N + W  +ISG+++N    EA  L+  M  +G   D+ T++T++ + A
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
             + +GV  ++H+   +   +    + ++L++ Y KCG ++ A ++F + S  D+ A ++
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSA 251

Query: 370 MITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +I  Y +     EAL+L+ E+     + P+     ++++ACA L   E G+ VH +I + 
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
                    NSL++M++KCG ID A R F  +  + ++SW++M+ G A HG G+EAL  F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQF 371

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             M    + P+ IT + VL AC+HAGLV E K  F  +E  +G++   EHY CM+D+L R
Sbjct: 372 RLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCR 431

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AG   EA E +  MP Q + ++WG++LGA R+Y N+E+G+ AA  L  +EP     ++LL
Sbjct: 432 AGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILL 491

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SNIYA   MW+ V KVR  M +  ++K PG S + + +  ++F  GD SH    EI   L
Sbjct: 492 SNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIML 551

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
            +V + L  AGYV      L ++++++KE+ +  HSEKLA+ +GL+ +  G  I + KNL
Sbjct: 552 RQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNL 611

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+C DCHT  + +SKI  R+I +RD NRFHHF++GSCSC  YW
Sbjct: 612 RVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 242/469 (51%), Gaps = 24/469 (5%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFI--DSRRLFDAIPERSVVSWNSLFSCYVHCDFLE 78
           +V TGF   +   N L+      G+     +  +F    E  V++WNS+   +V+ +   
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60

Query: 79  EAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
            A+  + EM+  S   P+ F+  S++  CA   +  +G+ +HG  +K    SD++    L
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           ++MYA  G+L+ A  +F+ + H + V W ++I+G + +   + AL L+++M+    +P+ 
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 198 FTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
            T  + + ACA  ELK+LG   +LH  + +M++K   ++G  LV+MYAKCG +  AR +F
Sbjct: 181 VTMATLVSACA--ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-----DQTTLSTVLKSVAS 310
             + +K++ AW+ +I G+++N    EA  LF    RE  G      ++ T+  V+ + A 
Sbjct: 239 DKLSDKDVYAWSALIFGYVKNNRSTEALQLF----REVAGGSNMRPNEVTILAVISACAQ 294

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              +   + VH    +T       + NSLID + KCG ++ A +IF   S  DL++  SM
Sbjct: 295 LGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSM 354

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFG 429
           +  +A  GLG EAL  +  MQ  ++ PD      +L AC++    ++GK++   I   +G
Sbjct: 355 VNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYG 414

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEI----PDRGIVSWSAMIGG 474
               +     +V++  + G + +A R F  +    PD  I  W +M+G 
Sbjct: 415 VRLKSEHYGCMVDLLCRAGLLAEA-REFIRVMPLQPDGAI--WGSMLGA 460



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 225/471 (47%), Gaps = 45/471 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C    +  +G  +HG VV     SD ++  +L+ MYA CG+   +R LF+ +  R+
Sbjct: 85  LLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRN 144

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V W S+ S Y+      EA+  +K+M   G  P+E +++++++ACA   D  +G K+H 
Sbjct: 145 KVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS 204

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  ++         +ALV+MYAK G+L+ A  VF  +   D+ +W+A+I G V +  +  
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 181 ALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF+++   S + PN  T  + + ACA +   E GR +H  + + +      +   L+
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DM++KCG +D A+ IF  M  K+LI+WN +++G   +G   EA + F  M    +  D+ 
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEI 384

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL + +           HA                        G V++  K+F E 
Sbjct: 385 TFIGVLTACS-----------HA------------------------GLVQEGKKLFYEI 409

Query: 360 SAVDLVACTS-----MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            A+  V   S     M+    + GL  EA +    M    + PD  +  S+L AC   + 
Sbjct: 410 EALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM---PLQPDGAIWGSMLGACRVYNN 466

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            E G++    ++K    +D      L N+YAK    ++  +    + ++GI
Sbjct: 467 LELGEEAARFLLKLEPTNDGVY-ILLSNIYAKRKMWNEVKKVRELMNEKGI 516


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/706 (35%), Positives = 387/706 (54%), Gaps = 42/706 (5%)

Query: 68  FSCYVHCDFLEEAVCFFKEMVLSGIRPNE-FSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
             C+   D +++A      M L   +PN+ F  + ++N  A SG+    RK+     +  
Sbjct: 30  LECFRASD-VDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQ-- 86

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
              D FS NA++ +YAK G +ED   +F ++   D VS+N VI+G   +     AL +F 
Sbjct: 87  --RDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFL 144

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M+   + P  +T+ S L AC  +     G+Q+H  +I   +  +  V   L D+YA+CG
Sbjct: 145 RMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCG 204

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +D+AR +F  M  +N++ WN++ISG+L+N    +   LF  M    +  DQ T S+VL 
Sbjct: 205 EIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVL- 263

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
                                              AY + G++++A K+F E    D V 
Sbjct: 264 ----------------------------------GAYIQAGYIDEARKVFGEIREKDEVC 289

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
            T MI   AQ G  E+AL L+ EM      PD +  SS++++CA L++   G+ VH    
Sbjct: 290 WTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAF 349

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
             G   D    ++LV+MY KCG   DA   FS +  R +VSW++MIGG A +G+  EAL 
Sbjct: 350 LMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALS 409

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           ++  MLE+ + P+ +T V VL AC HAGLV E K +F SM  + G++P  +HYACM+++ 
Sbjct: 410 LYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLF 469

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GR+G   +A++L+ +M  + N+ +W  +L    +  +++ G+ AA  L  + P  +  ++
Sbjct: 470 GRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYI 529

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           +LSN+YA+ G W +VA +R  MK   +KK    SWIE+ ++V+ F   DR+H  +K I+ 
Sbjct: 530 MLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHV 589

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT-IRVK 725
           +L+ +   L +AG+ P     LHD  E EK + + +HSEKLA+A+GLI  P G T IR+ 
Sbjct: 590 QLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRII 649

Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           KN+R C DCH   +F+S I  R +I+RD NRFHHF  G CSC  YW
Sbjct: 650 KNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 40/396 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT   DL  G Q+HG ++      + FV N+L  +YA+CG    +RRLFD +  R+
Sbjct: 161 VLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRN 220

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN + S Y+     E+ +  F EM +S ++P++ + SS++ A               
Sbjct: 221 VVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA--------------- 265

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y + G +++A  VF +I   D V W  +I GC  +   + 
Sbjct: 266 --------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEED 305

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF +M      P+ +T +S + +CA +     G+ +H     M +  D +V   LVD
Sbjct: 306 ALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVD 365

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCG   +A  IF  M  +N+++WN +I G+  NG D+EA SL+  M  E +  D  T
Sbjct: 366 MYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVT 425

Query: 301 LSTVLKSVASFQAIGVCKQVH-ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF--- 356
              VL +      +   K+   ++S +   E        +++ +G+ GH++ AV +    
Sbjct: 426 FVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSM 485

Query: 357 -KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            +E +++      S+         GE A +  +E+ 
Sbjct: 486 SQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELN 521



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 50/269 (18%)

Query: 397 PDSFVCSSLLN-ACANLSAYEQGKQV----HVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           P S  C + L   C   S  +Q K++    H+H+ K    +DTF  N L+N+YAK G I 
Sbjct: 19  PASHECYTRLALECFRASDVDQAKRLKSHMHLHLFK---PNDTFIHNRLLNLYAKSGEIS 75

Query: 452 DADRAFSEIPDRGIVSWSAM-------------------------------IGGLAQHGR 480
            A + F E+  R   SW+AM                               I G A +GR
Sbjct: 76  HARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGR 135

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY 539
           G  AL +F +M ++G+ P   T VSVL AC     +   K  H   +    G       +
Sbjct: 136 GGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLG----GNVF 191

Query: 540 AC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE--VGQHAAEMLF 595
            C  + D+  R G+  +A  L D M  + N   W  ++      +  E  +       + 
Sbjct: 192 VCNALTDLYARCGEIDQARRLFDRMVIR-NVVTWNLMISGYLKNRQPEKCIDLFHEMQVS 250

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKV 624
            ++P++ +   +L   Y  AG  D   KV
Sbjct: 251 NLKPDQVTASSVLG-AYIQAGYIDEARKV 278


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/626 (38%), Positives = 351/626 (56%), Gaps = 35/626 (5%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L+   Q  S+   P + +Y    +   G+ + +LG Q+H  ++   ++   +VG  +V 
Sbjct: 54  TLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVA 113

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YA  G +D +  +F+ + E + + +N +I  + + G      + +  M+  G   D  T
Sbjct: 114 FYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFT 173

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---- 356
              VLKS     ++ + K VH L ++   + D Y+  SLI  YGKCG + DA K+F    
Sbjct: 174 FPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMT 233

Query: 357 --------------KESSAVD-------------LVACTSMITAYAQFGLGEEALKLYLE 389
                          +S  +D             +V+ T+MI+ Y+Q GL ++AL L+ E
Sbjct: 234 IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDE 293

Query: 390 M--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           M  +D  + P+     S+L ACA LS  E+G+Q+H    + G  S+     +L  MYAKC
Sbjct: 294 MVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKC 353

Query: 448 GSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           GS+ DA   F ++   ++ +++W+ MI   A +G G +A+  F +M++ G+ P+ IT   
Sbjct: 354 GSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTG 413

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           +L  C+H+GLV     +F  M   + I P  EHYAC+ D+LGRAG+  EA +LV  MP  
Sbjct: 414 LLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMP 473

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
           A  S+WG+LL A R ++N+E+ + AA  LF +EPE +  +VLLSN+YA AG W  V K+R
Sbjct: 474 AGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLR 533

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             +K    KK PG SWIE+  K + F  GD SH + KEIY  L+ + + +  AGY P   
Sbjct: 534 AIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTS 593

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             LHD+ E EKE  L  HSEKLAVAFG++ TP    +RV KNLRIC DCHT+  FIS+I 
Sbjct: 594 YVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIY 653

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            RE+IVRD+NRFHHF+ G CSCG YW
Sbjct: 654 GREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 229/549 (41%), Gaps = 98/549 (17%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V +  T    L LG QVH  ++  G      V + +V  YA  G+   S  +F+ I E S
Sbjct: 76  VFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPS 135

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + +NS+   Y    F E  V  +  M   G   + F+   ++ +        +G+ +HG
Sbjct: 136 SLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHG 195

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA-----GCV-- 173
             +++G   D++ A +L+ +Y K G + DA  VF ++   D+ SWNA++A     GC+  
Sbjct: 196 LILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDA 255

Query: 174 ---LHEHNDW---------------------ALKLFQQM--KSSEINPNMFTYTSALKAC 207
              + E   W                     AL LF +M  + S + PN  T  S L AC
Sbjct: 256 ALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPAC 315

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM--PEKNLIA 265
           A +   E GRQ+H    +M + S+  V + L  MYAKCGS+ +AR  F  +   EKNLIA
Sbjct: 316 AQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIA 375

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +I+ +   G  ++A S F  M + G+  D  T + +L           C     + V
Sbjct: 376 WNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG---------CSHSGLVDV 426

Query: 326 KTAF---ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
              +    S  Y +N  ++ Y                      AC + +   A  G   E
Sbjct: 427 GLKYFNHMSTTYSINPRVEHY----------------------ACVADLLGRA--GRLAE 462

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNAC---ANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           A KL  EM    +     +  SLL AC    NL   E   +      K   +     GN 
Sbjct: 463 ASKLVGEM---PMPAGPSIWGSLLAACRKHRNLEMAETAAR------KLFVLEPENTGNY 513

Query: 440 --LVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM-------IGGLAQHGRGKEAL 485
             L NMYA+ G   + D+  + +  +G       SW  +       +GG   H +GKE +
Sbjct: 514 VLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKE-I 572

Query: 486 QMFGQMLED 494
            MF + L +
Sbjct: 573 YMFLEALPE 581


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/644 (37%), Positives = 377/644 (58%), Gaps = 6/644 (0%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           GL++H   + +G  +D F  N+LV  YA CG+  D+RR+FD +P R VVSWNSL S ++ 
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
               ++A      M+ SG+  N  SL S++ AC    +   G  +HG  +K G DS +  
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE--HNDWALKLFQQMKSS 191
            NALVDMY K G++E ++ VF+ +   + VSWN+ I GC L+   + D  L LF+ M   
Sbjct: 215 GNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAI-GCFLNAGLYGD-VLALFRGMSER 272

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
              P   T +S L A   +   +LGR++H   IK  ++ D  V   LVDMYAK GS+++A
Sbjct: 273 GFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKA 332

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +F  +  +N+++WN +I+  +QNG + EA  L   M ++G   +  TL  +L + +  
Sbjct: 333 CAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRM 392

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            ++   KQ+HA S++T    D +I N+LID Y KCG +  A  IF  S   D V+  ++I
Sbjct: 393 ASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDD-VSYNTLI 451

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
             Y+Q     E+L L+ ++    I  D+      L AC NLS+++QGK++H  +++    
Sbjct: 452 LGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLS 511

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           +  F  N+L+ +Y K G +D A + F+ I ++ + SW+ MI G   HG+   A  +F  M
Sbjct: 512 NHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLM 571

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
            + GV  +H++ ++VL  C+H GLV   K +F  M  +  ++P Q HYACM+D+LGR+G+
Sbjct: 572 KDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQ 630

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
             E++E++  MPF AN+ VWGALLGA RI+ N+E+ Q+AA+ LF ++PE S  + +L N+
Sbjct: 631 LTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNM 690

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           YA AG W+   K+R  MK  K++K P  SW++  +K+  F VGD
Sbjct: 691 YAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 263/508 (51%), Gaps = 4/508 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC  +++   GL VHG+V+ TG DS   + N+LV MY K G+   S ++F+ +PER+
Sbjct: 183 VVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERN 242

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS   C+++     + +  F+ M   G  P   +LSS++ A    G   LGR++HG
Sbjct: 243 EVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHG 302

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           YSIK   + D+F AN+LVDMYAK G+LE A AVF+ IE  ++VSWNA+IA  V +     
Sbjct: 303 YSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESE 362

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  L  +M+     PN  T  + L AC+ M   + G+Q+H   I+  +  D  +   L+D
Sbjct: 363 AFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALID 422

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +  A+ IF L  EK+ +++N +I G+ Q+    E+ +LF  +   G+ +D  +
Sbjct: 423 MYAKCGQLRLAQSIFDL-SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAIS 481

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L +  +  +    K++H + V+    +  ++ N+L+  Y K G ++ A KIF    
Sbjct: 482 FMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIK 541

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ +  +MI  Y   G  + A  L+  M+D  +  D     ++L+ C++    E+GK+
Sbjct: 542 EKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKK 601

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
              H++             +V++  + G + ++     ++P       W A++G    HG
Sbjct: 602 YFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHG 661

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVL 507
             + A      + E  + P H    SVL
Sbjct: 662 NIELAQYAADHLFE--LKPEHSGYYSVL 687



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 248/485 (51%), Gaps = 5/485 (1%)

Query: 40  YAKCGNFIDSRRLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEF 97
           YA   +   SR L    P R  S   WNSL           EA+  +  M+ SG+ P++ 
Sbjct: 16  YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75

Query: 98  SLSSMINACAGSGDSLL--GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           +    ++A A +  +    G ++H  +++ G+ +D+F+ N LV  YA  G+  DA  VF 
Sbjct: 76  TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD 135

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
           ++   D+VSWN++++  + ++  D A +    M  S +  N+ +  S + AC   +    
Sbjct: 136 EMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGF 195

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G  +H  ++K  + S   +G  LVDMY K G ++ +  +F  MPE+N ++WN  I   L 
Sbjct: 196 GLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLN 255

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
            G   +  +LF  M   G      TLS++L ++       + ++VH  S+K A E D ++
Sbjct: 256 AGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFV 315

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            NSL+D Y K G +E A  +F++    ++V+  +MI    Q G   EA  L ++MQ    
Sbjct: 316 ANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGE 375

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            P+S    +LL AC+ +++ + GKQ+H   I+ G M D F  N+L++MYAKCG +  A  
Sbjct: 376 CPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQS 435

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F ++ ++  VS++ +I G +Q     E+L +F Q+   G+  + I+ +  L AC +   
Sbjct: 436 IF-DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSS 494

Query: 516 VAEAK 520
             + K
Sbjct: 495 FKQGK 499


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/694 (36%), Positives = 394/694 (56%), Gaps = 21/694 (3%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           ++ ++ A A       G ++HG   KLG+ SD    N L+DMYAK G L+ A  VF  + 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGR 217
             ++VSW A++ G + H      L+L  +M++ SE  PN +T +++LKAC   E    G 
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQN 276
            +H   ++   +   +V   LV +Y+K G + +AR +F      + L  WN +ISG+   
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 277 GGDMEAASLFPWM------YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G   +A  +F  M      + +    D+ T +++LK+     A     QVHA    + F 
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 331 --SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+  +  +L+D Y KCG +  A+++F+     + +  T+++  +AQ G   EAL+L+ 
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
                    D+ V SS++   A+ +  EQG+QVH + +K    +D  AGNS+V+MY KCG
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCG 579

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
             D+A+R F EIP R +VSW+ MI GL +HG G+EA+ MF +M   GV P+ +T +++L 
Sbjct: 580 LPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLS 639

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+HAGLV E + +F  + +   ++P  EHYACM+D+LGRAG+ +EA +L+ TMP +   
Sbjct: 640 ACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTV 699

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            VW  LL A R++K+V VG+ A ++L AI+ +    +V LSN++A AG W    KVR  M
Sbjct: 700 GVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAM 759

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVG--DRSHARSKEIYAKLDEV-SDLLNKAGY-VPMV 684
           +   LKK+ G SW+E+  +V+ F  G  + +H ++ +I   L +V + +  + GY    V
Sbjct: 760 RRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDV 819

Query: 685 ETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA-------TIRVKKNLRICVDCHTS 737
           +  LHDV+E  + + L  HSE+LAV   L+              IRV KNLR+C DCH  
Sbjct: 820 QFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEF 879

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F+ +S +V R ++VRD NRFH F +G+CSC  YW
Sbjct: 880 FKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 165/547 (30%), Positives = 274/547 (50%), Gaps = 25/547 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+A      L  G+Q+HG +   GF SD  + N+L+ MYAKCG    +  +F  + +R+
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSW +L   ++        +    EM   S   PNE++LS+ + AC  + D   G  IH
Sbjct: 283 VVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIH 342

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
           G  ++ GY+     A++LV +Y+K G + DA  VF        + +WNA+I+G     H 
Sbjct: 343 GLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHG 402

Query: 179 DWALKLFQQMK------SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK--MEIKS 230
             AL +F++M+        +  P+ FT+ S LKAC G+     G Q+H ++        S
Sbjct: 403 RDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTAS 462

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           + I+   LVDMY KCG +  A  +F  +  KN I W  V+ GH Q G  MEA  LF   +
Sbjct: 463 NAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFW 522

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           R G   D   LS+++  +A F  +   +QVH   VK+   +D    NS++D Y KCG  +
Sbjct: 523 RSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPD 582

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           +A ++F+E  A ++V+ T+MI    + GLG EA+ ++ EM+   + PD     +LL+AC+
Sbjct: 583 EAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACS 642

Query: 411 NLSAYEQGKQVHVHIIKFGFM---SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           +    ++ ++    I +   +   ++ +A   +V++  + G + +A      +P    V 
Sbjct: 643 HAGLVDECRRYFSCIRRDRTVRPKAEHYA--CMVDLLGRAGELREARDLIRTMPMEPTVG 700

Query: 468 -WSAMIGGLAQH---GRGKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHH 522
            W  ++     H     G+EA  +   +  DG  P N++TL +V      AG   E    
Sbjct: 701 VWQTLLSACRVHKDVAVGREAGDVL--LAIDGDNPVNYVTLSNVFA---EAGAWRECHKV 755

Query: 523 FESMEKK 529
            ++M ++
Sbjct: 756 RDAMRRR 762


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/534 (41%), Positives = 338/534 (63%), Gaps = 5/534 (0%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++MY K   +++A  +F  MP++N+I+W  +IS + +     +A  L   M R+ V  +
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S+VL+S      +   + +H   +K   ESD ++ ++LID + K G  EDA+ +F 
Sbjct: 162 VYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    D +   S+I  +AQ    + AL+L+  M+      +    +S+L AC  L+  E 
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G Q HVHI+K+    D    N+LV+MY KCGS++DA R F+++ +R +++WS MI GLAQ
Sbjct: 279 GMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           +G  +EAL++F +M   G  PN+IT+V VL AC+HAGL+ +  ++F SM+K +GI P++E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CMID+LG+AGK  +A++L++ M  + +A  W  LLGA R+ +N+ + ++AA+ + A+
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +PE + T+ LLSNIYA++  WD+V ++R  M+D  +KKEPG SWIEV  +++ F +GD S
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNS 516

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H +  E+  KL+++   L   GYVP     L D+E  + E  L HHSEKLA+AFGL+  P
Sbjct: 517 HPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLP 576

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
               IR++KNLRIC DCH   +  SK+  R I++R   R+HHF++G CSCG YW
Sbjct: 577 IEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 230/470 (48%), Gaps = 49/470 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C S + +  G  +   + F G     F+ N L+ MY K     D+ +LFD +P+R+
Sbjct: 67  LIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRN 126

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW ++ S Y  C   ++A+     M+   +RPN ++ SS++ +C G  D    R +H 
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHC 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G +SD+F  +AL+D++AK+G  EDA++VF ++   D + WN++I G   +  +D 
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF++MK +       T TS L+AC G+ L ELG Q H  ++K +   D I+   LVD
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVD 301

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS+++A  +F+ M E+++I W+ +ISG  QNG   EA  LF  M   G   +  T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +  VL                A S     E   Y   S+   YG      D V+      
Sbjct: 362 IVGVL---------------FACSHAGLLEDGWYYFRSMKKLYGI-----DPVR------ 395

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA-----NLSAY 415
             +   C  MI    + G  ++A+KL  EM   E  PD+    +LL AC       L+ Y
Sbjct: 396 --EHYGC--MIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEY 448

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
              K + +         D      L N+YA     D  +   + + DRGI
Sbjct: 449 AAKKVIALD------PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/679 (35%), Positives = 394/679 (58%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K+C +   L LG  VH      G D D +V ++L+ MYA  G    +R +FD + ER 
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN +   YV    +  AV  F+ M  SG  PN  +L+  ++ CA   D L G ++H 
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHT 272

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G + ++  AN LV MYAK   LE+A  +F  +   D+V+WN +I+GCV +   D 
Sbjct: 273 LAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDD 332

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF  M+ S + P+  T  S L A   +   + G+++H  +++     D  +   LVD
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD 392

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC  +  A+ +F      +++  + +ISG++ N     A  +F ++   G+  +   
Sbjct: 393 IYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM 452

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++ L + AS  A+ + +++H   +K A+E   Y+ ++L+D Y KCG ++ +  +F + S
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMS 512

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
           A D V   SMI+++AQ G  EEAL L+ +M    +  ++   SS+L+ACA L A   GK+
Sbjct: 513 AKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKE 572

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  IIK    +D FA ++L++MY KCG+++ A R F  +P++  VSW+++I     HG 
Sbjct: 573 IHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGL 632

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE++ +   M E+G   +H+T ++++ AC HAG V E    F  M +++ I+P  EH +
Sbjct: 633 VKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLS 692

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+  RAGK  +AM+ +  MPF+ +A +WGALL A R+++NVE+ + A++ LF ++P 
Sbjct: 693 CMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPH 752

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
               +VL+SNI A AG WD V+K+RR MKD K++K PG SW++V +  + F   D++H  
Sbjct: 753 NCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPD 812

Query: 661 SKEIYAKLDEVSDLLNKAG 679
           S+EIY  L  +   L + G
Sbjct: 813 SEEIYMSLKSLIIELKQEG 831



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 181/590 (30%), Positives = 312/590 (52%), Gaps = 18/590 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF-----DSDEFVANSLVVMYAKCGNFIDSRRLFDA 55
           +L+ C +   L LGL++H   V +G           +   LV MY     F D+  +F +
Sbjct: 42  LLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSS 101

Query: 56  IPERSV---VSWNSLFSCYVHCDFLEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSG 110
           +P  +    + WN L   +        AV F+ +M    S  RP+  +L  ++ +CA  G
Sbjct: 102 LPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALG 161

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
              LGR +H  +  LG D DM+  +AL+ MYA  G L+ A  VF  ++  D V WN ++ 
Sbjct: 162 ALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMD 221

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
           G V       A+ LF+ M++S  +PN  T    L  CA       G QLH   +K  ++ 
Sbjct: 222 GYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEP 281

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           +  V   LV MYAKC  ++EA  +F LMP  +L+ WN +ISG +QNG   +A  LF  M 
Sbjct: 282 EVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQ 341

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           + G+  D  TL+++L ++         K++H   V+     D ++V++L+D Y KC  V 
Sbjct: 342 KSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVR 401

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A  +F  + ++D+V  ++MI+ Y    + E A+K++  +    I P++ + +S L ACA
Sbjct: 402 MAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACA 461

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +++A   G+++H +++K  +    +  ++L++MY+KCG +D +   FS++  +  V+W++
Sbjct: 462 SMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNS 521

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI   AQ+G  +EAL +F QM+ +GV  N++T+ S+L AC  AGL   A ++ + +    
Sbjct: 522 MISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSAC--AGL--PAIYYGKEIHGII 577

Query: 531 GIQPMQEHY---ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              P++      + +ID+ G+ G  + A+ + + MP + N   W +++ A
Sbjct: 578 IKGPIRADLFAESALIDMYGKCGNLELALRVFEHMP-EKNEVSWNSIISA 626


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/668 (35%), Positives = 379/668 (56%), Gaps = 36/668 (5%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P  F L+ ++ A A SG     R++         D ++F+ NAL+   A    + D   +
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMERL 101

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMEL 212
           F  +   D VS+NA+I G         +++L++ +   E + P   T ++ +   + +  
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH---------------- 256
           + LG  +HC ++++   +   VG  LVDMYAK G + +AR +F                 
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 257 ---------------LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
                          LM +++ I W  +++G  QNG  +EA  +F  M  EGVG DQ T 
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
            ++L +  +  A+   KQ+HA   +T +E + ++ ++L+D Y KC  +  A  +F+  + 
Sbjct: 282 GSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            ++++ T+MI  Y Q    EEA++ + EMQ   I PD F   S++++CANL++ E+G Q 
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQF 401

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   +  G M      N+LV +Y KCGSI+DA R F E+     VSW+A++ G AQ G+ 
Sbjct: 402 HCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
           KE + +F +ML +G+ P+ +T + VL AC+ AGLV +   +F+SM+K  GI P+ +HY C
Sbjct: 462 KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTC 521

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           MID+  R+G+F+EA E +  MP   +A  W  LL + R+  N+E+G+ AAE L   +P+ 
Sbjct: 522 MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQN 581

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
            +++VLL +++A+ G W  VA +RR M+D ++KKEPG SWI+ K+KV+ F+  D+SH  S
Sbjct: 582 PASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFS 641

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGAT 721
             IY KL+ ++  + + GY P V + LHDV +++K  ++ HHSEKLA+AFGLI  P    
Sbjct: 642 SRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMP 701

Query: 722 IRVKKNLR 729
           IR+ KNLR
Sbjct: 702 IRIVKNLR 709



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 233/468 (49%), Gaps = 33/468 (7%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D + F  N+L+   A      D  RLF ++PER  VS+N+L + +        +V  ++ 
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 87  MVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           ++    +RP   +LS+MI   +   D  LG  +H   ++LG+ +  F  + LVDMYAK+G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAG---CVLHEHND-------------W--------- 180
            + DA  VF+++E   +V +N +I G   C + E                W         
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 181 ------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 AL +F++M++  +  + +T+ S L AC  +   E G+Q+H  + +   + +  V
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVDMY+KC S+  A  +F  M  +N+I+W  +I G+ QN    EA   F  M  +G+
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  TL +V+ S A+  ++    Q H L++ +       + N+L+  YGKCG +EDA +
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E S  D V+ T+++T YAQFG  +E + L+ +M    + PD      +L+AC+    
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGL 495

Query: 415 YEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
            E+G      + K  G +        ++++Y++ G   +A+    ++P
Sbjct: 496 VEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 200/429 (46%), Gaps = 40/429 (9%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           D  LG  VH  V+  GF +  FV + LV MYAK G   D+RR+F  +  ++VV +N+L +
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 70  CYVHCDFLE-------------------------------EAVCFFKEMVLSGIRPNEFS 98
             + C  +E                               EA+  F+ M   G+  ++++
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
             S++ AC        G++IH Y  +  Y+ ++F  +ALVDMY+K  ++  A AVF+ + 
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             +I+SW A+I G   +  ++ A++ F +M+   I P+ FT  S + +CA +   E G Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
            HC  +   +     V   LV +Y KCGS+++A  +F  M   + ++W  +++G+ Q G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIV 336
             E   LF  M   G+  D  T   VL   S A     G C    ++         D   
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG-CDYFDSMQKDHGIVPIDDHY 519

Query: 337 NSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFG---LGEEALKLYLEMQD 392
             +ID Y + G  ++A +  K+   + D     +++++    G   +G+ A +  LE   
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDP 579

Query: 393 REINPDSFV 401
           +  NP S+V
Sbjct: 580 Q--NPASYV 586



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 144/287 (50%), Gaps = 11/287 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC +   L  G Q+H  +  T ++ + FV ++LV MY+KC +   +  +F  +  R+
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW ++   Y      EEAV  F EM + GI+P++F+L S+I++CA       G + H 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G    +  +NALV +Y K G++EDA  +F ++   D VSW A++ G         
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--- 237
            + LF++M ++ + P+  T+   L AC+   L E G    C       K   IV +    
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG----CDYFDSMQKDHGIVPIDDHY 519

Query: 238 --LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
             ++D+Y++ G   EA      MP   +   W  ++S   +  G+ME
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS-CRLRGNME 565



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 64/272 (23%)

Query: 314 IGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           + V   VH L +KT  ++   +++N L+ AY K G +  A ++F E    +L    ++++
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 373 AYAQFGLGEEALKLYLEMQDRE--------------------------------INPDSF 400
           A A   L  +  +L+  M +R+                                + P   
Sbjct: 88  ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             S+++   + LS    G  VH  +++ GF +  F G+ LV+MYAK G I DA R F E+
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207

Query: 461 P-------------------------------DRGIVSWSAMIGGLAQHGRGKEALQMFG 489
                                           DR  ++W+ M+ GL Q+G   EAL +F 
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
           +M  +GV  +  T  S+L AC     + E K 
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQ 299



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           VH  I+K F     TF  N L+  YAK G +  A R F E+PD  + + +A++  LA   
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              +  ++F  M E     + ++  +++   +  G  A +   + ++ ++  ++P +   
Sbjct: 94  LVPDMERLFASMPER----DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149

Query: 540 ACMI 543
           + MI
Sbjct: 150 SAMI 153


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/514 (42%), Positives = 335/514 (65%), Gaps = 1/514 (0%)

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M  +++ +W  +I+G+ QN    EA  L   M R     +  T +++LK+  +  + G+ 
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
           +Q+HAL+VK  +  D Y+ ++L+D Y +CG ++ A+ +F +  + + V+  ++I  +A+ 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
           G GE  L ++ EMQ        F  SS+ +A A + A EQGK VH H+IK G     F G
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           N++++MYAK GS+ DA + F  +  + +V+W++M+   AQ+G G+EA+  F +M + GV 
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
            N IT +S+L AC+H GLV E K +F+ M K+  ++P  +HY  ++D+LGRAG   +A+ 
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            +  MP +  A+VWGALLG+ R++KN ++GQ AA+ +F ++P+ +   VLL NIYAS G 
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           WD  A+VR+ MK   +KKEP  SW+E+++ V+ F   D +H RS+EIY K +E+S  + K
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419

Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           AGYVP  +  L  V+E E++  L +HSEK+A+AF LI  P GATIR+ KN+RIC DCH++
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           F +ISK+  REI+VRD NRFHHF +GSCSCG YW
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 163/302 (53%), Gaps = 5/302 (1%)

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R + SW SL + Y   D  +EA+     M+    +PN F+ +S++ A   S  S +G +I
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H  ++K  +  D++  +AL+DMYA+ G ++ A+AVF  +E  + VSWNA+IAG       
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 123

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           +  L +F +M+ +      FTY+S   A AG+   E G+ +H  +IK   +    VG  +
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 183

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYAK GSM +AR +F  + +K+L+ WN +++   Q G   EA + F  M + GV  +Q
Sbjct: 184 LDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 243

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFES--DDYIVNSLIDAYGKCGHVEDA-VKI 355
            T  ++L + +    +   KQ   +  +   E   D Y+  +++D  G+ G + DA V I
Sbjct: 244 ITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYV--TVVDLLGRAGLLNDALVFI 301

Query: 356 FK 357
           FK
Sbjct: 302 FK 303



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 6/338 (1%)

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           D+ SW ++IAG   ++  D AL L   M      PN FT+ S LKA        +G Q+H
Sbjct: 5   DMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 64

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
              +K +   D  VG  L+DMYA+CG MD A  +F  +  KN ++WN +I+G  + G   
Sbjct: 65  ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 124

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
               +F  M R G      T S+V  ++A   A+   K VHA  +K+      ++ N+++
Sbjct: 125 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 184

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           D Y K G + DA K+F      DLV   SM+TA+AQ+GLG EA+  + EM+   ++ +  
Sbjct: 185 DMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 244

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
              S+L AC++    ++GKQ    + +     +     ++V++  + G ++DA     ++
Sbjct: 245 TFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 304

Query: 461 PDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           P +   + W A++G    H   K      GQ   D V 
Sbjct: 305 PMKPTAAVWGALLGSCRMHKNAK-----IGQFAADHVF 337



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 140/271 (51%), Gaps = 1/271 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA  +     +G Q+H + V   +  D +V ++L+ MYA+CG    +  +FD +  ++
Sbjct: 47  LLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKN 106

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWN+L + +      E  +  F EM  +G     F+ SS+ +A AG G    G+ +H 
Sbjct: 107 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 166

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK G     F  N ++DMYAK G++ DA  VF  ++  D+V+WN+++     +     
Sbjct: 167 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGRE 226

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F++M+   ++ N  T+ S L AC+   L + G+Q    + +  ++ +    V +VD
Sbjct: 227 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVD 286

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIA-WNIVI 270
           +  + G +++A +    MP K   A W  ++
Sbjct: 287 LLGRAGLLNDALVFIFKMPMKPTAAVWGALL 317



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 13/227 (5%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G  VH  ++ +G     FV N+++ MYAK G+ ID+R++FD + ++ +V+WNS+ + +  
Sbjct: 161 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQ 220

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                EAV  F+EM   G+  N+ +  S++ AC+  G    G++      +   + ++  
Sbjct: 221 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDH 280

Query: 134 ANALVDMYAKVGNLEDA-VAVFKDIEHPDIVSWNAVIAGCVLHEH---NDWALKLFQQMK 189
              +VD+  + G L DA V +FK    P    W A++  C +H++     +A     ++ 
Sbjct: 281 YVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELD 340

Query: 190 SSEINP-----NMFTYTSALKACAG----MELKELGRQLHCSLIKME 227
             +  P     N++  T    A A     M+   + ++  CS +++E
Sbjct: 341 PDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIE 387


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/766 (33%), Positives = 404/766 (52%), Gaps = 111/766 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA----- 55
           +L+ C  KK    G  +H  ++ +    D F++N L+  YAKC     SRRLFD      
Sbjct: 11  LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70

Query: 56  --------------------------IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     +PER++VSWN+L S      F ++A+  +  M  
Sbjct: 71  IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSR 130

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  P  F+L+S+++AC    D   GR+ HG SIK+G D++++  NAL+ MYAK   + D
Sbjct: 131 EGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGD 190

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A+  F D+  P+ VS+ A++ G    +  + A +LF+ M  + I+ +  + +S L  C+ 
Sbjct: 191 AIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSR 250

Query: 210 MELKEL--------------GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
               E               G+Q+HC  IK   +SD  +   L+DMYAK G+MD A MIF
Sbjct: 251 GGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIF 310

Query: 256 HLMPEKNLIAWNIVISGHLQ----------------------------------NGGDME 281
             MPE ++++WN++I+G+ Q                                    GD+E
Sbjct: 311 VNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIE 370

Query: 282 AA----------SLFPW------------------MYRE----GVGFDQTTLSTVLKSVA 309
           A           SL  W                  ++RE     V  D+TTL+ +L S+A
Sbjct: 371 AGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLA 430

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               +   +QVHA+S K  F +D Y+ + LI  Y KCG VE A +IF   + +D+V   S
Sbjct: 431 GMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNS 490

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M+   +   L +EA   + +M+++ + P  F  +++L+ CA LS+  QG+QVH  I + G
Sbjct: 491 MMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREG 550

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
           +M+D F G++L++MY+KCG +D A   F  +  +  V+W+ MI G AQ+G G EA+ ++ 
Sbjct: 551 YMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYE 610

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
            M+  G  P+ IT V+VL AC+H+GLV      F SM+++ G++P+ +HY C+ID LGRA
Sbjct: 611 DMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRA 670

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLS 609
           G+  EA  L+D MP + +  +W  LL + R+Y +V + + AAE LF ++P+ S+ +VLL+
Sbjct: 671 GRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLA 730

Query: 610 NIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           NIY+S G WD+   VR  M  N++ K+PG SWIE K+ +  F V D
Sbjct: 731 NIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDD 776



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/527 (24%), Positives = 220/527 (41%), Gaps = 88/527 (16%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L+S++  C      L G+ IH + ++     D F +N L++ YAK   ++ +  +F  + 
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 159 HPDIVSWNAVI-AGCVLHEHND---------------W---------------ALKLFQQ 187
             DI +WNA++ A C   E  D               W               AL ++ +
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M      P  FT  S L AC  +   E GR+ H   IK+ + ++  VG  L+ MYAKC  
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL-- 305
           + +A   F  +PE N +++  ++ G   +    EA  LF  M R  +  D  +LS+VL  
Sbjct: 188 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 247

Query: 306 --------------KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
                           V S    G  +QVH L++K  FESD ++ NSL+D Y K G+++ 
Sbjct: 248 CSRGGCGEFGLHDSNDVLSSDVHG--QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 305

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
           A  IF     V +V+   MI  Y Q     +A++    MQ     PD     ++L AC  
Sbjct: 306 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIK 365

Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
               E G+Q+                                   F  +    + SW+ +
Sbjct: 366 SGDIEAGRQM-----------------------------------FDGMSSPSLSSWNTI 390

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG-LVAEAKHHFESMEKKF 530
           + G +Q+   KEA+++F +M    V P+  TL  +L +   AG ++ E      ++ +K 
Sbjct: 391 LSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSL--AGMMLLEGGRQVHAVSQKA 448

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             +      + +I +  + GK + A  + D +  + +   W +++  
Sbjct: 449 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA-ELDIVCWNSMMAG 494



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 31/247 (12%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV--------- 349
           T L+++L++    +A    K +HA  +++    D ++ N LI+ Y KC  +         
Sbjct: 6   TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65

Query: 350 ----------------------EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
                                 EDA  +F E    ++V+  ++I+A  + G  ++AL +Y
Sbjct: 66  MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVY 125

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
             M      P  F  +S+L+AC  L   E G++ H   IK G  ++ + GN+L+ MYAKC
Sbjct: 126 YRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKC 185

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
             I DA +AF ++P+   VS++AM+GGLA   +  EA ++F  ML + +  + ++L SVL
Sbjct: 186 RCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVL 245

Query: 508 CACNHAG 514
             C+  G
Sbjct: 246 GVCSRGG 252


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/689 (34%), Positives = 388/689 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC   K + +G  VH  V   G   D FV +SL+ +YA+ G+  D++ LFD IP++ 
Sbjct: 64  VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKD 123

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN + + YV       A+  F EM  S I+PN  + + +++ CA      LG ++HG
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++  G + D   AN L+ MY+K   L+ A  +F  +   D+VSWN +I+G V +     
Sbjct: 184 IAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGE 243

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF+ M S+ I P+  T+ S L     +   +  +++H  +I+  +  D  +   L+D
Sbjct: 244 AEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALID 303

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y KC  ++ A+         + +    +ISG++ NG + EA   F W+ +E +     T
Sbjct: 304 IYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVT 363

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            S++  + A   A+ + K++H   +KT  +   ++ ++++D Y KCG ++ A ++F   +
Sbjct: 364 FSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT 423

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D +   SMIT+ +Q G   EA+ L+ +M       D    S  L+ACANL A   GK+
Sbjct: 424 EKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKE 483

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +IK    SD +A +SL++MYAKCG+++ + R F  + ++  VSW+++I     HG 
Sbjct: 484 IHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGD 543

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            KE L +F +ML +G+ P+H+T + ++ AC HAG V E   ++  M +++GI    EHYA
Sbjct: 544 LKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYA 603

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           C+ D+ GRAG+  EA E +++MPF  +A VWG LLGA  I+ NVE+ + A++ LF ++P 
Sbjct: 604 CVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPL 663

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VLL+N+ A AG W  V KVR  MK+  ++K PG SWIEV +  + F   D SH  
Sbjct: 664 NSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPL 723

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           + +IY+ LD +   L K GYVP +   +H
Sbjct: 724 TAQIYSVLDSLLLELKKEGYVPQLYLPMH 752



 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 166/542 (30%), Positives = 288/542 (53%), Gaps = 8/542 (1%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           MY + G+  D++ LF  +      +WN +   +        A+ F+ +M+ +G+ P++++
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
              ++ AC G     +G+ +H     +G   D+F  ++L+ +YA+ G+L DA  +F +I 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
             D V WN ++ G V +  +  A+K+F +M+ SEI PN  T+   L  CA   + +LG Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           LH   +   ++ D  V   L+ MY+KC  +  AR +F  +P+ +L++WN +ISG++QNG 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
             EA  LF  M   G+  D  T ++ L  V    ++  CK++H   ++ A   D ++ ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           LID Y KC  VE A K   +SS+ D V CT+MI+ Y   G  +EAL+ +  +    + P 
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           S   SS+  A A L+A   GK++H  IIK         G+++++MYAKCG +D A R F+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            I ++  + W++MI   +Q+GR  EA+ +F QM  +G   + +++   L AC +      
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACAN----LP 476

Query: 519 AKHHFESMEKKFGIQPMQ-EHYA--CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           A H+ + +       P++ + YA   +ID+  + G    +  + D M  + N   W +++
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-EKNEVSWNSII 535

Query: 576 GA 577
            A
Sbjct: 536 SA 537


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/662 (36%), Positives = 374/662 (56%), Gaps = 4/662 (0%)

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
           GD   G+ +H   I   +  D+   N L+  YAK G +  A  VF  +   + VS N ++
Sbjct: 25  GDLSKGKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           +G      +  +L+L   ++  +   N +  ++A+ A A +   ++GRQ H   +K    
Sbjct: 84  SGYASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
               V   ++ MY +C  M++A  +F  +   +  A+N +I+G+L  G    +  +   M
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNM 200

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             E   +D  +   VL   AS +   +  QVHA ++K   E + Y+ ++L+D YGKC HV
Sbjct: 201 TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHV 260

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            DA + F+     ++V+ T+++TAY Q  L E+AL+L+L+M+   + P+ F  +  LN+C
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           A L+A   G  +   ++K G        N+L+NMY+K GSI+DA R F  +P R +VSW+
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWN 380

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
            +I G A HG  +E ++ F  ML   V+P+++T V VL AC   GLV EA ++  +M K+
Sbjct: 381 LIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKE 440

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
            GI P +EHY CM+ +L R G+  EA   +       +   W +LL + ++YKN  +G  
Sbjct: 441 VGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHR 500

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
            AE +  +EP    T+VLLSN+YA A  WD V KVR+ M++  ++K PG+SWI V   V+
Sbjct: 501 VAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVH 560

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            FT  ++ H +  +I  KL+E+ D +   GYVP     LHD+++  KE+ L +HSEKLA+
Sbjct: 561 VFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLAL 620

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AFGLI TP GATI + KNLRIC DCH + + IS + SR+I+VRD  RFH    G CSC  
Sbjct: 621 AFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCND 680

Query: 770 YW 771
           YW
Sbjct: 681 YW 682



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 257/526 (48%), Gaps = 11/526 (2%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           DL  G  +H  ++ T    D  + N+L+  YAKCG    +R +FDA+P R+ VS N L S
Sbjct: 26  DLSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            Y      +E++   + +V  G+  NE+ LS+ ++A A      +GR+ HGY++K G+  
Sbjct: 85  GYASSGRHKESLQLLR-VVDFGM--NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
             +  NA++ MY +  ++EDA  VF+ +   D  ++N++I G +     D +L + + M 
Sbjct: 142 QRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                 +  +Y + L  CA M+   LG Q+H   +K  ++ +  VG  LVDMY KC  + 
Sbjct: 202 GEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVH 261

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A   F ++PEKN+++W  V++ + QN    +A  LF  M  EGV  ++ T +  L S A
Sbjct: 262 DANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCA 321

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A+     + A  +KT       + N+L++ Y K G +EDA ++F      D+V+   
Sbjct: 322 GLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNL 381

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKF 428
           +IT YA  GL  E ++ +  M    + P       +L+ACA L   ++    ++  + + 
Sbjct: 382 IITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEV 441

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADR-AFSEIPDRGIVSWSAMIGG---LAQHGRGKEA 484
           G          +V +  + G +D+A+R   +      +V+W +++        +G G   
Sbjct: 442 GITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRV 501

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVAEAKHHFESMEKK 529
            +   Q LE   +  ++ L ++    N   G+V   KH  E   +K
Sbjct: 502 AEQILQ-LEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRK 546


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/691 (35%), Positives = 384/691 (55%), Gaps = 41/691 (5%)

Query: 81  VCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDM 140
           + FF + +L+       S   +  A   + D    +K+H     L    +      L+  
Sbjct: 10  ITFFIQQILT-------SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRS 62

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           YA  G       VF ++   ++V +N +I   V +   D  L +F++M +    P+ +TY
Sbjct: 63  YAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTY 122

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
              LKAC+  E    G  +H  ++K+ +  +  VG GL+ MY KCG + EAR +F  M  
Sbjct: 123 PCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIW 182

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++++WN +++G+  N    +A  +   M   G   D  T+++++ +VA+          
Sbjct: 183 KDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVAN---------- 232

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
                 T+ E+  Y+                  KIF      +L++   MI  Y +  L 
Sbjct: 233 ------TSSENVLYVE-----------------KIFVNLERKNLISWNVMIRVYMKNSLP 269

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
            +A+ LYL+M+   + PD+   +S+L AC +LSA   G+++H ++ K     +    NSL
Sbjct: 270 TQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSL 329

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++MYA+CG +DDA R F  +  R + SW+++I      G+G  A+ +F +ML  G  P+ 
Sbjct: 330 IDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDS 389

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
           I  V++L AC+H+GL+ E + +F+ M   + I P  EHYAC++D+LGRAG+  EA  ++ 
Sbjct: 390 IAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIK 449

Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
            MP + N  VW  LL + R++ N+++G  AA+ L  + PE+S  +VLLSNIYA AG W  
Sbjct: 450 QMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKE 509

Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
           V ++R  MK  K++K PG+S +E+ ++V+TF  GD SH +SKEIY +L  +   + + GY
Sbjct: 510 VTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGY 569

Query: 681 VPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEF 740
           VP  ++ LHDVEE +KE  L  HSEKLA+ F L+ T     IR+ KNLR+C DCH + + 
Sbjct: 570 VPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKL 628

Query: 741 ISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ISKIV REIIVRD NRFHHF++G CSCG YW
Sbjct: 629 ISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 177/368 (48%), Gaps = 52/368 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+  ++L  GL +HG V+  G D + FV N L+ MY KCG   ++RR+FD +  + 
Sbjct: 125 VLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKD 184

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ + Y H    ++A+   +EM   G +P+  +++S++ A A +           
Sbjct: 185 VVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS---------- 234

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                       S N L   Y +         +F ++E  +++SWN +I   + +     
Sbjct: 235 ------------SENVL---YVE--------KIFVNLERKNLISWNVMIRVYMKNSLPTQ 271

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ L+ QM+   + P+  T+ S L AC  +    LGR++H  + K ++  + ++   L+D
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYA+CG +D+A+ +F  M  +++ +W  +IS +   G    A +LF  M   G   D   
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPD--- 388

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAF---ESDDYIVNS-------LIDAYGKCGHVE 350
                 S+A    +  C     L     +    +DDY +         L+D  G+ G V+
Sbjct: 389 ------SIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVD 442

Query: 351 DAVKIFKE 358
           +A  I K+
Sbjct: 443 EAYNIIKQ 450



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 4/230 (1%)

Query: 45  NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMIN 104
           N +   ++F  +  ++++SWN +   Y+      +AV  + +M    + P+  + +S++ 
Sbjct: 237 NVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLP 296

Query: 105 ACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS 164
           AC      LLGR+IH Y  K     ++   N+L+DMYA+ G L+DA  VF  ++  D+ S
Sbjct: 297 ACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVAS 356

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           W ++I+   +      A+ LF +M +S   P+   + + L AC+   L + GR ++   +
Sbjct: 357 WTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGR-IYFKQM 415

Query: 225 KMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVIS 271
             + +  P +     LVD+  + G +DEA  I   MP E N   W  ++S
Sbjct: 416 TDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 365/645 (56%), Gaps = 11/645 (1%)

Query: 137 LVDMYAKVGNLEDAVAVFKD--------IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           L+ +Y+K+G+L  A  +F           + P+    N ++        +  A+ L+  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           +   +  N FTY   LK CA       G  +H  +++    SD  V   LVDMYAKCG +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
            +A  +F  M  ++++ W  +I+ + Q    ++A  LF  M  EG   D+ T  +V  +V
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
                  +   VH  +V   F  D  + NS++  Y KCG+VE A  +F      + ++  
Sbjct: 244 GQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWN 303

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           SM++ Y Q G   +AL L+ +MQ  E +P+      +++AC+ L +   G+++H  +I  
Sbjct: 304 SMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 363

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFS--EIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
               DT   N++++MY KCG +D A   F+  E+ +R + SW+ +I G   HG GKEAL+
Sbjct: 364 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 423

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F +M  +GV PN IT  S+L AC+HAGL+ E +  F  M  K  ++P  +HYACM+D+L
Sbjct: 424 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDML 482

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG   EA  L+  +P + +  VWGALL A RI+ N E+G+ AA  LF +EPE +  +V
Sbjct: 483 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYV 542

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           L+SNIYA++  W  V  VR+ MK   LKK    S IE   +V+ F   D+S    +E+Y 
Sbjct: 543 LMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYR 602

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           K++ ++  +   GYVP +   LHDVE  +KE LL +HSEKLAVAFG++    G  I+V K
Sbjct: 603 KVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTK 662

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLR+C DCH +F+FIS I  R+IIVRD NRFHHF+ G CSCG YW
Sbjct: 663 NLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 197/360 (54%), Gaps = 2/360 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C S+     G  VHG VV TGF SD FV  +LV MYAKCG   D+  +FD +  R 
Sbjct: 138 VLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRD 197

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV W ++ + Y   +   +A+  F++M   G   +E +  S+ +A    GD  +   +HG
Sbjct: 198 VVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHG 257

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y++  G+  D+   N++V MYAK GN+E A  VF  +E  + +SWN++++G   +     
Sbjct: 258 YAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTD 317

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF QM++SE +PN  T    + AC+ +  K LGR+LH  +I  ++  D  +   ++D
Sbjct: 318 ALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMD 377

Query: 241 MYAKCGSMDEARMIFH--LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           MY KCG +D A  +F+   + E+++ +WN++ISG+  +G   EA  LF  M  EGV  + 
Sbjct: 378 MYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPND 437

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T +++L + +    I   ++  A   K +   +      ++D  G+ G + +A ++ K+
Sbjct: 438 ITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKK 497



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 238/492 (48%), Gaps = 17/492 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF--DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +L+ CTS   L L   +H  +   GF   +  F+A  L+++Y+K G+   +R LFD    
Sbjct: 31  LLQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLAR-LIILYSKLGDLHSARTLFDHRHH 86

Query: 59  RSVVSW--------NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG 110
                         N++   Y +     EA+  +  M   G+  N F+   ++  CA   
Sbjct: 87  HHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASEL 146

Query: 111 DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA 170
            ++ G  +HG  ++ G+ SD+F   ALVDMYAK G + DA  VF  +   D+V W A+I 
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
                E    AL LF++M+      +  T  S   A   +    +   +H   +      
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
           D  VG  +V MYAKCG+++ AR++F  M E+N I+WN ++SG+ QNG   +A SLF  M 
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
                 +  T   ++ + +   +  + +++H   + +  + D  + N+++D Y KCG ++
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386

Query: 351 DAVKIFK--ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
            AV++F   E    D+ +   +I+ Y   G G+EAL+L+  MQ   + P+    +S+L+A
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS- 467
           C++    ++G++    + K     +      +V+M  + G +++A R   +IP R     
Sbjct: 447 CSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV 506

Query: 468 WSAMIGGLAQHG 479
           W A++     HG
Sbjct: 507 WGALLLACRIHG 518


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/555 (39%), Positives = 337/555 (60%)

Query: 217  RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
            ++ H  +    ++ D  +      MY     +D A ++F  +P      WN++I G   +
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 277  GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
            G  + +  L+  M  +G+  D+      LKS A    +   K +H   V     +D ++ 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 337  NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
             +L+D Y KCG +E A  +F + +  DLV+ TSMI+ YA  G   E L  +  M+   + 
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916

Query: 397  PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            P+     S+L AC NL A  +G+  H ++I+ GF  D     ++++MY+KCGS+D A   
Sbjct: 917  PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976

Query: 457  FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
            F E   + +V WSAMI     HG G++A+ +F QM++ GV P+H+T   VL AC+H+GL+
Sbjct: 977  FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036

Query: 517  AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
             E K +F+ M ++F I     +YACM+D+LGRAG+  EA++L++ MP + +AS+WG+LLG
Sbjct: 1037 EEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096

Query: 577  AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
            A RI+ N+++ +  A+ LF ++P  +  HVLLSNIYA+   W+ V KVR+ M      K 
Sbjct: 1097 ACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKI 1156

Query: 637  PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
             G S +E  ++V+ F VGDRSH + +++YAKL+E++  +   GYVP+ +  LHD+EE  K
Sbjct: 1157 QGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAK 1216

Query: 697  EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
            E  L +HSE+LA+AFGLI T PG T+R+ KNLRIC DCH + + ISKIV+R I+VRD++R
Sbjct: 1217 EAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHR 1276

Query: 757  FHHFRNGSCSCGGYW 771
            FH F +G CSCG YW
Sbjct: 1277 FHRFEDGVCSCGDYW 1291



 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/700 (35%), Positives = 406/700 (58%), Gaps = 17/700 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC + + +    Q+H  V  TG   D F A  L  +YAKC +   +R++FD  P  +
Sbjct: 10  LFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V  WNS    Y      EE +  F  M+ + G  P+ F++   + ACAG     LG+ IH
Sbjct: 67  VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126

Query: 120 GYSIK---LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           G++ K   +G  SDMF  +ALV++Y+K G + +A+ VF++ + PD V W +++ G   + 
Sbjct: 127 GFAKKNDEIG--SDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 177 HNDWALKLFQQMKSSE---INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD-P 232
             + AL LF QM   +   ++P   T  S + ACA +   + G  +H  +I+ E   D P
Sbjct: 185 DPEEALALFSQMVMMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           +V   L+++YAK G    A  +F  MPEK++I+W+ +I+ +  N    EA +LF  M  +
Sbjct: 243 LVN-SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
               +  T+ + L++ A  + +   K++H ++V   FE D  +  +LID Y KC   ++A
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           V +F+     D+V+  ++++ YAQ G+  +++ ++  M    I PD+     +L A + L
Sbjct: 362 VDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL 421

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
             ++Q   +H ++++ GF S+ F G SL+ +Y+KCGS+ DA + F  +  R +V WS+MI
Sbjct: 422 GIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMI 481

Query: 473 GGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
                HGRG EAL++F QM+++  V PN++T +S+L AC+HAGLV E    F+ M   + 
Sbjct: 482 AAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQ 541

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           ++P  EH+  M+D+LGR G+  +AM++++ MP  A   VWGALLGA RI+ N+E+G+ AA
Sbjct: 542 LRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAA 601

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           + LF ++P  +  ++LLSNIYA  G WDNVA++R  +K+  LKK  G S +EV+  V++F
Sbjct: 602 KNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSF 661

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
              DR H  S++IY  L ++   + K  Y+P ++  LHD 
Sbjct: 662 LASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDT 701



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 189/373 (50%), Gaps = 18/373 (4%)

Query: 116  RKIHG--YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            +K H   ++  L YDS + +  A+  MY     ++ A  VF+DI +P    WN +I G  
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFA 794

Query: 174  LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                   +L+L+ +M    + P+ F +  ALK+CAG+   + G+ +H  L+     +D  
Sbjct: 795  TDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLF 854

Query: 234  VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
            V   LVDMYAKCG ++ AR++F  M  ++L++W  +ISG+  NG + E    F  M   G
Sbjct: 855  VDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSG 914

Query: 294  VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
            V  ++ ++ +VL +  +  A+   +  H+  ++T FE D  +  +++D Y KCG ++ A 
Sbjct: 915  VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 974

Query: 354  KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
             +F E++  DLV  ++MI +Y   G G +A+ L+ +M    + P     + +L+AC++  
Sbjct: 975  CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034

Query: 414  AYEQGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
              E+GK      + F  M++ F           +V++  + G + +A      +P     
Sbjct: 1035 LLEEGK------MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDA 1088

Query: 467  S-WSAMIGGLAQH 478
            S W +++G    H
Sbjct: 1089 SIWGSLLGACRIH 1101



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 241/541 (44%), Gaps = 50/541 (9%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+AC   ++L  G ++H I V+ GF+ D  V+ +L+ MY KC    ++  LF  +P++ V
Sbjct: 314 LQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDV 373

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSW +L S Y       +++  F+ M+  GI+P+  ++  ++ A +  G       +HGY
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 433

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
            ++ G++S++F   +L+++Y+K G+L DAV +FK +   D+V W+++IA   +H     A
Sbjct: 434 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 493

Query: 182 LKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLV 239
           L++F QM K+S + PN  T+ S L AC+   L E G ++   ++   +++ D      +V
Sbjct: 494 LEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMV 553

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG----HLQNGGDMEAASLFPWMYREGV 294
           D+  + G + +A  I + MP       W  ++      H    G+  A +LF W+     
Sbjct: 554 DLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLF-WLDPSHA 612

Query: 295 GF---------------DQTTLSTVLKSVASFQAIG-----VCKQVHALSVKTAFESDDY 334
           G+               +   L T +K     +  G     V   VH+      F  D  
Sbjct: 613 GYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQ 672

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
            +  L+             ++ KE    DL        A  QF    +A +   +     
Sbjct: 673 KIYELLRKL--------EAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSA 724

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
              D+  C S L            K+ H  I  +G   D+        MY     ID A 
Sbjct: 725 PGTDTISCFSCL------------KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAAS 772

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
             F +IP+     W+ MI G A  GR   +L+++ +M+E G+ P+       L +C  AG
Sbjct: 773 IVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC--AG 830

Query: 515 L 515
           L
Sbjct: 831 L 831



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 200/454 (44%), Gaps = 44/454 (9%)

Query: 16   QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            + H  +   G   D  +     +MY        +  +F+ IP      WN +   +    
Sbjct: 738  KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797

Query: 76   FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
                ++  + +M+  G++P++F+    + +CAG  D   G+ IH + +  G  +D+F   
Sbjct: 798  RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857

Query: 136  ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            ALVDMYAK G++E A  VF  +   D+VSW ++I+G   + +N   L  F  M+SS + P
Sbjct: 858  ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917

Query: 196  NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
            N  +  S L AC  +     G   H  +I+   + D +V   ++DMY+KCGS+D AR +F
Sbjct: 918  NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977

Query: 256  HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
                 K+L+ W+ +I+ +  +G   +A  LF  M + GV     T + VL + +    + 
Sbjct: 978  DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037

Query: 316  VCKQVHALSVK---TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
              K    L  +    A +  +Y    ++D  G+ G +         S AVDL+       
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYAC--MVDLLGRAGQL---------SEAVDLI------- 1079

Query: 373  AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
                              ++  + PD+ +  SLL AC   +  +  +++  H+     + 
Sbjct: 1080 ------------------ENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFH---LD 1118

Query: 433  DTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRG 464
               AG    L N+YA     ++ ++    +  RG
Sbjct: 1119 PVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRG 1152



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 138/259 (53%), Gaps = 1/259 (0%)

Query: 2    LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
            LK+C    DL  G  +H  +V  G  +D FV  +LV MYAKCG+   +R +FD +  R +
Sbjct: 825  LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884

Query: 62   VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            VSW S+ S Y H  +  E + FF  M  SG+ PN  S+ S++ AC   G    G   H Y
Sbjct: 885  VSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 944

Query: 122  SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
             I+ G++ D+  A A++DMY+K G+L+ A  +F +    D+V W+A+IA   +H H   A
Sbjct: 945  VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004

Query: 182  LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LVD 240
            + LF QM  + + P+  T+T  L AC+   L E G+     + +  + +  +     +VD
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVD 1064

Query: 241  MYAKCGSMDEARMIFHLMP 259
            +  + G + EA  +   MP
Sbjct: 1065 LLGRAGQLSEAVDLIENMP 1083



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 28/199 (14%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL AC +   L  G   H  V+ TGF+ D  VA +++ MY+KCG+   +R LFD    + 
Sbjct: 925  VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 984

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---------- 110
            +V W+++ + Y       +A+  F +MV +G+RP+  + + +++AC+ SG          
Sbjct: 985  LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 1044

Query: 111  ----DSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSW 165
                + ++ RK+  Y+              +VD+  + G L +AV + +++   PD   W
Sbjct: 1045 LMTEEFVIARKLSNYA-------------CMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091

Query: 166  NAVIAGCVLHEHNDWALKL 184
             +++  C +H + D A K+
Sbjct: 1092 GSLLGACRIHNNLDLAEKI 1110


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/680 (35%), Positives = 398/680 (58%), Gaps = 3/680 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +L A  + K    G Q+H   V  G D++ FV +SL+ +YAKCG   D++ +FD   E++
Sbjct: 331  MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 390

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V WN++ + +V  +  EEA+  F+ M+   ++ +EF+  S++ AC       LG+++H 
Sbjct: 391  IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             +IK   D  +F ANA +DMY+K G + DA A+F  I + D +SWNA+  G   +   + 
Sbjct: 451  VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A+ + ++M+   I P+  ++++A+ AC+ +   E G+Q+HC  IK  I S+  VG  L+D
Sbjct: 511  AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            +Y+K G ++ +R IF  +   +++  N +I+G +QN  + EA  LF  + ++G+     T
Sbjct: 571  LYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVT 630

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-SLIDAYGKCGHVEDAVKIFKE- 358
             S++L   +      + KQVH  ++K+    DD ++  SL   Y K   +EDA K+  E 
Sbjct: 631  FSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEM 690

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                +L   T++I+ YAQ G G+ +L  +  M+   +  D    +S+L AC++++A+  G
Sbjct: 691  PDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADG 750

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
            K++H  I K GF S   A ++L++MY+KCG +  +  AF E+ ++  I+ W++MI G A+
Sbjct: 751  KEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAK 810

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G   EAL +F +M E  + P+ +T + VL AC H+GL++E +H F  M K +G+ P  +
Sbjct: 811  NGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLD 870

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            HYAC ID+LGR G  QEA E +D +PF+ +  VW   L A R++K+ E G+ AA  L  +
Sbjct: 871  HYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVEL 930

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP+ SST+VLLS+++A+ G W      R  M++  + K PG SWI V +K   F V D+ 
Sbjct: 931  EPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKY 990

Query: 658  HARSKEIYAKLDEVSDLLNK 677
            H  +  IY  L +++ ++ K
Sbjct: 991  HPDNLRIYEMLGDLTGMMKK 1010



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 174/593 (29%), Positives = 295/593 (49%), Gaps = 44/593 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G QVH  VV +GF S  F   +LV MYAKCG+  ++RR+FD I    
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + W+S+ +CY      +EA+  F  M   G  P++ +L ++I+  A S           
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASS----------- 272

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                                   G L+ A A+ K +  P  V+WNAVI+G         
Sbjct: 273 ------------------------GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            L L++ M+S  + P   T+ S L A A M+    G+Q+H + +   + ++  VG  L++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG   +A+ +F L  EKN++ WN +++G +QN    EA  +F +M R  +  D+ T
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 428

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             ++L +     +  + KQVH +++K   +   ++ N+ +D Y K G + DA  +F    
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 488

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D ++  ++    AQ    EEA+ +   M+   I PD    S+ +NAC+N+ A E GKQ
Sbjct: 489 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQ 548

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   IK+G  S+   G+SL+++Y+K G ++ + + F+++    IV  +A+I G  Q+  
Sbjct: 549 IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN 608

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             EA+Q+F Q+L+DG+ P+ +T  S+L  C+   L +           K G+  + +   
Sbjct: 609 EDEAIQLFQQVLKDGLKPSSVTFSSILSGCS-GSLNSAIGKQVHCYTLKSGV--LYDDTL 665

Query: 541 CMIDILG---RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
             + + G   ++   ++A +L+  MP   N   W A++     Y     G H+
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG---YAQNGYGDHS 715



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 281/551 (50%), Gaps = 10/551 (1%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           G   D+    +++   A  G    +  L   +P  S V+WN++ S +         +  +
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY 313

Query: 85  KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
           K+M   G+ P   + +SM++A A     + G+++H  ++  G D+++F  ++L+++YAK 
Sbjct: 314 KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G   DA  VF      +IV WNA++ G V +E  + A+++FQ M    +  + FT+ S L
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            AC  +    LG+Q+HC  IK  +     V    +DMY+K G++ +A+ +F L+P K+ I
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI 493

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +WN +  G  QN  + EA  +   M   G+  D  + ST + + ++ +A    KQ+H L+
Sbjct: 494 SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 553

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K    S+  + +SLID Y K G VE + KIF +  A  +V   ++I  + Q    +EA+
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAI 613

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM-SDTFAGNSLVNM 443
           +L+ ++    + P S   SS+L+ C+       GKQVH + +K G +  DT  G SL  +
Sbjct: 614 QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 673

Query: 444 YAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           Y K   ++DA++  +E+PD + +  W+A+I G AQ+G G  +L  F +M    V  +  T
Sbjct: 674 YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 733

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG-------KFQEA 555
             SVL AC+     A+ K     +  K G    +   + +ID+  + G        F+E 
Sbjct: 734 FASVLKACSDVTAFADGK-EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792

Query: 556 MELVDTMPFQA 566
               D MP+ +
Sbjct: 793 KNKQDIMPWNS 803



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 215/465 (46%), Gaps = 45/465 (9%)

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           +L GR + G S  LG   D     +LV++Y K G +  A +           + +++++ 
Sbjct: 77  ALHGRILRGGSPLLGRLGD-----SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 131

Query: 172 CVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
                     L  F+ ++ ++   P+ F     L AC+ + +   GRQ+HC ++K    S
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSS 191

Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                  LVDMYAKCG +  AR +F  +   + I W+ +I+ + + G   EA +LF  M 
Sbjct: 192 SVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           + G   DQ TL T++ ++AS                                    G ++
Sbjct: 252 KMGSAPDQVTLVTIISTLAS-----------------------------------SGRLD 276

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A  + K+      VA  ++I+ +AQ GL    L LY +M+   + P     +S+L+A A
Sbjct: 277 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 336

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           N+ A+ +G+Q+H   +  G  ++ F G+SL+N+YAKCG   DA   F    ++ IV W+A
Sbjct: 337 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 396

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKK 529
           M+ G  Q+   +EA++MF  M+   +  +  T VS+L AC +       K  H  +++  
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC 456

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
             I     +    +D+  + G   +A  L   +P++ + S W AL
Sbjct: 457 MDISLFVAN--ATLDMYSKYGAIGDAKALFSLIPYKDSIS-WNAL 498



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 12/307 (3%)

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
            C+ +H   ++        + +SL++ Y K G V  A      +      A +S+++ +A
Sbjct: 74  TCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 133

Query: 376 QFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           + G   + L  +  ++      PD F  + +L+AC+ +     G+QVH  ++K GF S  
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F   +LV+MYAKCG + +A R F  I     + WS+MI    + G  +EAL +F +M + 
Sbjct: 194 FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM 253

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G  P+ +TLV+++     +G +  A    + M       P    +  +I    ++G    
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHATALLKKMP-----TPSTVAWNAVISGHAQSGLEFN 308

Query: 555 AMELVDTMP---FQANASVWGALLGAARIYKNVEVGQ--HAAEMLFAIEPEKSSTHVLLS 609
            + L   M         S + ++L AA   K    GQ  HAA ++  ++        L+ 
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLI- 367

Query: 610 NIYASAG 616
           N+YA  G
Sbjct: 368 NLYAKCG 374


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/579 (40%), Positives = 347/579 (59%), Gaps = 3/579 (0%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N   Y + L++C        GRQLH  L+   +  D ++   LVD+YA CG +  AR +F
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 256 HLMPEK-NLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQA 313
             MP + N+  WN++I  + ++G    A  L+  M   G +  D  T   VLK+ A+   
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +G  ++VH   ++T++ +D ++   LID Y KCG V++A  +F  ++  D V   SMI A
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
             Q G   EAL L   M    I P      S ++A A+  A  +G+++H +  + GF S 
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
                SL++MYAK G +  A   F ++  R ++SW+AMI G   HG    A ++F +M  
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 494 DG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           +  V+P+HIT V VL ACNH G+V EAK  F+ M   + I+PM +HY C++D+LG +G+F
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           +EA +++  M  + ++ +WGALL   +I+KNVE+ + A   L  +EPE +  +VLLSNIY
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIY 481

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A +G W+  A+VR+ M +  LKK    SWIE+K K + F VGD SH RS EIY +L+ + 
Sbjct: 482 AQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLE 541

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
            L+++ GYVP   +  H+VE+ EK  ++  HSE+LA+AFGLI+TPPG  + V KNLR+C 
Sbjct: 542 GLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCE 601

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH   + IS+I  REII+RDVNR+HHF NG CSC  +W
Sbjct: 602 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 233/522 (44%), Gaps = 61/522 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           +L++C   + +  G Q+H  ++ +G   D  +A  LV +YA CG    +RRLFD +P + 
Sbjct: 69  ILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQG 128

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI 118
           +V  WN L   Y      E A+  ++EM+  G + P+ F+   ++ ACA   D   GR++
Sbjct: 129 NVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREV 188

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   ++  + +D+F    L+DMYAK G +++A AVF      D V WN++IA C  +   
Sbjct: 189 HDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRP 248

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL L + M +  I P + T  SA+ A A       GR+LH    +    S   +   L
Sbjct: 249 AEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSL 308

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFD 297
           +DMYAK G +  AR++F  +  + LI+WN +I G   +G    A  LF  M  E  V  D
Sbjct: 309 LDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPD 368

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI--VNSLIDAYGKCGHVEDAVKI 355
             T   VL +      +   K+V  L V T +     +     L+D  G  G        
Sbjct: 369 HITFVGVLSACNHGGMVQEAKEVFDLMV-TVYSIKPMVQHYTCLVDVLGHSGR------- 420

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           FKE+S V                           ++   + PDS +  +LLN C     +
Sbjct: 421 FKEASDV---------------------------IKGMLVKPDSGIWGALLNGC---KIH 450

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VSW 468
           +  +   + + K   +    AGN   L N+YA+ G  ++A R    + +RG+      SW
Sbjct: 451 KNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSW 510

Query: 469 SAMIG-------GLAQHGRGKEALQ----MFGQMLEDGVLPN 499
             + G       G A H R  E  +    + G + + G +P+
Sbjct: 511 IELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPD 552



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 187/397 (47%), Gaps = 21/397 (5%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           N  + ++++ +C  S     GR++H   +  G   D   A  LVD+YA  G +  A  +F
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 155 KDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMEL 212
            ++ +  ++  WN +I         + A++L+++M +   + P+ FTY   LKACA +  
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              GR++H  +++    +D  V  GL+DMYAKCG +DEA  +F     ++ + WN +I+ 
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
             QNG   EA +L   M  EG+     TL + + + A   A+   +++H    +  F S 
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
           D +  SL+D Y K G V  A  +F +    +L++  +MI  +   G  + A +L+  M++
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 393 R-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             ++ PD      +L+AC +    ++ K+V      F  M   ++   +V  Y     + 
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEV------FDLMVTVYSIKPMVQHYTCLVDVL 415

Query: 452 DADRAFSEI----------PDRGIVSWSAMIGGLAQH 478
                F E           PD GI  W A++ G   H
Sbjct: 416 GHSGRFKEASDVIKGMLVKPDSGI--WGALLNGCKIH 450



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 9/308 (2%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           ++    +T+L+S    +A+   +Q+HA  + +    D  +   L+D Y  CG V  A ++
Sbjct: 61  YNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRL 120

Query: 356 FKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLS 413
           F E  +  ++     +I AYA+ G  E A++LY EM     + PD+F    +L ACA L 
Sbjct: 121 FDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALL 180

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               G++VH  +++  + +D F    L++MYAKCG +D+A   F     R  V W++MI 
Sbjct: 181 DLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIA 240

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGI 532
              Q+GR  EAL +   M  +G+ P  +TLVS + A   AG +   +  H     + FG 
Sbjct: 241 ACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGS 300

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           Q   +    ++D+  ++G    A  L D + F      W A++    ++ + +   HA E
Sbjct: 301 Q--DKLKTSLLDMYAKSGWVTVARVLFDQL-FHRELISWNAMICGFGMHGHAD---HACE 354

Query: 593 MLFAIEPE 600
           +   +  E
Sbjct: 355 LFRRMRNE 362


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 283/793 (35%), Positives = 422/793 (53%), Gaps = 89/793 (11%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKC---GNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           Q HG +V     S  +  + L++   +      ++DS  +F + P      ++ +   Y 
Sbjct: 19  QFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS--IFTSSPSPDASVYSCMLKYYS 76

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                 + V  FK      +RP  F    +I     SG+       H Y +KLG+  D F
Sbjct: 77  RMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMF-----HAYVLKLGHIDDHF 131

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             NA++DMYAK G ++ A  +F+ +    +  WN++I+GC    +   A+ LF  M +  
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR- 190

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
              N+ T+TS                                   +V  YAK G ++ AR
Sbjct: 191 ---NIITWTS-----------------------------------MVTGYAKMGDLESAR 212

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF- 311
             F  MPE+++++WN + S + Q     EA +LF  M  EG+  D TT    + S +S  
Sbjct: 213 RYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIG 272

Query: 312 ------QAIGVCKQVHALS---VKTAF----------------------ESDDYIVNSLI 340
                   + +  Q H +    VKTA                       + +    N +I
Sbjct: 273 DPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMI 332

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDS 399
            AY + G +  A ++F      D+V+  SMI  YAQ G    +++L+ EM    +I PD 
Sbjct: 333 SAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDE 392

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFS 458
              +S+L+AC ++ A +    V + I++   +    +G NSL+ MY+KCGS+ DA R F 
Sbjct: 393 VTIASVLSACGHIGALKLSYWV-LDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQ 451

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            +  R +VS++ +I G A +G GKEA+++   M E+G+ P+H+T + VL AC+HAGL+ E
Sbjct: 452 TMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE 511

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            K+ F+S++      P  +HYACM+D+LGRAG+  EA  L+ +MP + +A V+G+LL A+
Sbjct: 512 GKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNAS 566

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+K V +G+ AA  LF +EP+    +VLLSNIYAS G W++V +VR  MK   LKK  G
Sbjct: 567 RIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVG 626

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
           MSW+E K +V+ FTVGDRSH +SK+IY  L E+   + + G+V      L DVEE EKE+
Sbjct: 627 MSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEE 686

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
           +L  HSEKLA+ F L+ +  G TIRV KNLRIC+DCHT+ + ISK+  REI+VRD NRFH
Sbjct: 687 MLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFH 746

Query: 759 HFRNGSCSCGGYW 771
            F  G CSC  YW
Sbjct: 747 CFSEGMCSCHDYW 759



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 207/481 (43%), Gaps = 76/481 (15%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G   H  V+  G   D F+ N+++ MYAK G    +R LF+ + ER++  WNS+ S    
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                EAV  F  M    I     + +SM+                              
Sbjct: 174 SGNETEAVVLFNMMPARNI----ITWTSMVTG---------------------------- 201

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
                  YAK+G+LE A   F ++    +VSWNA+ +     E    AL LF QM    I
Sbjct: 202 -------YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+  T+   + +C+ +    L   +   + +  I  +  V   L+DM+AK G+++ AR 
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314

Query: 254 IFHL--------------------------------MPEKNLIAWNIVISGHLQNGGDME 281
           IF                                  MP++++++WN +I+G+ QNG    
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374

Query: 282 AASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           +  LF  M     +  D+ T+++VL +     A+ +   V  +  +   +      NSLI
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLI 434

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y KCG V DA +IF+     D+V+  ++I+ +A  G G+EA+KL L M++  I PD  
Sbjct: 435 FMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHV 494

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
               +L AC++     +GK V   I       D +A   +V++  + G +D+A      +
Sbjct: 495 TYIGVLTACSHAGLLNEGKNVFKSIQ--APTVDHYA--CMVDLLGRAGELDEAKMLIQSM 550

Query: 461 P 461
           P
Sbjct: 551 P 551


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/657 (39%), Positives = 389/657 (59%), Gaps = 19/657 (2%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           + ++FS N +V  YAK   +  A  +F +I  PD VS+N +I+G         A+ LF++
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+      + FT +  + AC   +  +L +QLHC  +     S   V    V  Y+K G 
Sbjct: 131 MRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188

Query: 248 MDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           + EA  +F+ M E ++ ++WN +I  + Q+    +A +L+  M  +G   D  TL++VL 
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE---DAVKIFKESSAVD 363
           ++ S   +   +Q H   +K  F  + ++ + LID Y KCG  +   D+ K+F+E  + D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308

Query: 364 LVACTSMITAYA-QFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQ 420
           LV   +MI+ Y+    L EEA+K + +MQ     PD  SFVC  + +AC+NLS+  Q KQ
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC--VTSACSNLSSPSQCKQ 366

Query: 421 VHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           +H   IK    S+  +  N+L+++Y K G++ DA   F  +P+   VS++ MI G AQHG
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
            G EAL ++ +ML+ G+ PN IT V+VL AC H G V E + +F +M++ F I+P  EHY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           +CMID+LGRAGK +EA   +D MP++  +  W ALLGA R +KN+ + + AA  L  ++P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             ++ +V+L+N+YA A  W+ +A VR+ M+  +++K+PG SWIEVK K + F   D SH 
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606

Query: 660 RSKEIYAKLDEVSDLLNKAGYV-----PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
             +E+   L+E+   + K GYV      MV+ D     E ++E  L HHSEKLAVAFGL+
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDE--AGEGDEEMRLGHHSEKLAVAFGLM 664

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +T  G  + V KNLRIC DCH + +F+S +  REIIVRD  RFH F++G CSCG YW
Sbjct: 665 STRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 258/523 (49%), Gaps = 53/523 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
           +L    +++DLF G  +H + V +   S  +++N  V +Y+KCG                
Sbjct: 14  LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73

Query: 45  ----NFI------DS-----RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
               N I      DS     R+LFD IP+   VS+N+L S Y        A+  FK M  
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G   + F+LS +I AC    D  L +++H +S+  G+DS     NA V  Y+K G L +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191

Query: 150 AVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           AV+VF  + E  D VSWN++I     H+    AL L+++M       +MFT  S L A  
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD---EARMIFHLMPEKNLIA 265
            ++    GRQ H  LIK     +  VG GL+D Y+KCG  D   ++  +F  +   +L+ 
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311

Query: 266 WNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           WN +ISG+  N     EA   F  M R G   D  +   V  + ++  +   CKQ+H L+
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371

Query: 325 VKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           +K+   S+   V N+LI  Y K G+++DA  +F     ++ V+   MI  YAQ G G EA
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA------- 436
           L LY  M D  I P+     ++L+ACA+    ++G++       F  M +TF        
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY------FNTMKETFKIEPEAEH 485

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
            + ++++  + G +++A+R    +P + G V+W+A++G   +H
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 203/411 (49%), Gaps = 19/411 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
           ++ AC  + DL    Q+H   V  GFDS   V N+ V  Y+K G   ++  +F  + E R
Sbjct: 146 LIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             VSWNS+   Y       +A+  +KEM+  G + + F+L+S++NA       + GR+ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLE---DAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           G  IK G+  +    + L+D Y+K G  +   D+  VF++I  PD+V WN +I+G  ++E
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323

Query: 177 H-NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-V 234
             ++ A+K F+QM+     P+  ++     AC+ +      +Q+H   IK  I S+ I V
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ +Y K G++ +AR +F  MPE N +++N +I G+ Q+G   EA  L+  M   G+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF----ESDDYIVNSLIDAYGKCGHVE 350
             ++ T   VL + A    +    Q +  ++K  F    E++ Y  + +ID  G+ G +E
Sbjct: 444 APNKITFVAVLSACAHCGKVDE-GQEYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKLE 500

Query: 351 DAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +A +       +  +V   A       +    L E A    + MQ     P
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GK +H   +K    S T+  N  VN+Y+KCG +  A  AF    +  + S++ ++   A+
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVS 505
             +   A Q+F ++ +   + ++ TL+S
Sbjct: 87  DSKIHIARQLFDEIPQPDTV-SYNTLIS 113


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 283/793 (35%), Positives = 422/793 (53%), Gaps = 89/793 (11%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKC---GNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           Q HG +V     S  +  + L++   +      ++DS  +F + P      ++ +   Y 
Sbjct: 19  QFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS--IFTSSPSPDASVYSCMLKYYS 76

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                 + V  FK      +RP  F    +I     SG+       H Y +KLG+  D F
Sbjct: 77  RMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLF-----HAYVLKLGHIDDHF 131

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             NA++DMYAK G ++ A  +F+ +    +  WN++I+GC    +   A+ LF  M +  
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR- 190

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
              N+ T+TS                                   +V  YAK G ++ AR
Sbjct: 191 ---NIITWTS-----------------------------------MVTGYAKMGDLESAR 212

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF- 311
             F  MPE+++++WN + S + Q     EA +LF  M  EG+  D TT    + S +S  
Sbjct: 213 RYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIG 272

Query: 312 ------QAIGVCKQVHALS---VKTAF----------------------ESDDYIVNSLI 340
                   + +  Q H +    VKTA                       + +    N +I
Sbjct: 273 DPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMI 332

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDS 399
            AY + G +  A ++F      D+V+  SMI  YAQ G    +++L+ EM    +I PD 
Sbjct: 333 SAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDE 392

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDDADRAFS 458
              +S+L+AC ++ A +    V + I++   +    +G NSL+ MY+KCGS+ DA R F 
Sbjct: 393 VTIASVLSACGHIGALKLSYWV-LDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQ 451

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            +  R +VS++ +I G A +G GKEA+++   M E+G+ P+H+T + VL AC+HAGL+ E
Sbjct: 452 TMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE 511

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            K+ F+S++      P  +HYACM+D+LGRAG+  EA  L+ +MP + +A V+G+LL A+
Sbjct: 512 GKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNAS 566

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+K V +G+ AA  LF +EP+    +VLLSNIYAS G W++V +VR  MK   LKK  G
Sbjct: 567 RIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVG 626

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
           MSW+E K +V+ FTVGDRSH +SK+IY  L E+   + + G+V      L DVEE EKE+
Sbjct: 627 MSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEE 686

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
           +L  HSEKLA+ F L+ +  G TIRV KNLRIC+DCHT+ + ISK+  REI+VRD NRFH
Sbjct: 687 MLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFH 746

Query: 759 HFRNGSCSCGGYW 771
            F  G CSC  YW
Sbjct: 747 CFSEGMCSCHDYW 759


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/690 (35%), Positives = 376/690 (54%), Gaps = 2/690 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ ACTS + L  G ++H  ++ +    D  + N ++ MY KCG+  D+R+ FD +  R+
Sbjct: 163 LILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRN 222

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW  + S Y       +A+  + +M+ SG  P+  +  S+I AC  +GD  LGR++HG
Sbjct: 223 VVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHG 282

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK GYD  + + NAL+ MY + G +  A  VF  I   D++SW ++I G     +   
Sbjct: 283 HVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIE 342

Query: 181 ALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL LF+ M +     PN F + S   AC  +   E GRQ+H    K  +  +   G  L 
Sbjct: 343 ALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLC 402

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G +  A   F+ +   +L++WN +I+    +G   EA   F  M   G+  D  
Sbjct: 403 DMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGI 462

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE- 358
           T  ++L +  S   I    Q+H+  +K   + +  + NSL+  Y KC ++ DA  +FK+ 
Sbjct: 463 TFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDV 522

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           S   +LV+  ++++A  Q     E  +L+  M   E  PD+   +++L  CA L++ E G
Sbjct: 523 SENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVG 582

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            QVH   +K G + D    N L++MYAKCGS+  A   F    +  IVSWS++I G AQ 
Sbjct: 583 NQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQF 642

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G EAL +F  M   GV PN +T + VL AC+H GLV E  H + +ME + GI P +EH
Sbjct: 643 GLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREH 702

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+L RAG   EA   +  M F  + ++W  LL + + + NV++ + AAE +  ++
Sbjct: 703 VSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLD 762

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+  VLLSNI+AS G W  VA++R  MK   ++K PG SWI VKD+++ F   D SH
Sbjct: 763 PSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSH 822

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
            +  +IY  L+++   +   GY P    D+
Sbjct: 823 QQRGDIYTMLEDLWLQMLDDGYDPCQRLDI 852



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 229/460 (49%), Gaps = 7/460 (1%)

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQ-QMKSSEINPNMFTYTSALKACAGMELKELG 216
           +H   +S N+ I       H   AL  F    K+S I     TY + + AC  +   + G
Sbjct: 117 QHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYG 176

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +++H  ++K   + D ++   +++MY KCGS+ +AR  F  M  +N+++W I+ISG+ QN
Sbjct: 177 KKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQN 236

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G + +A  ++  M + G   D  T  +++K+      I + +Q+H   +K+ ++      
Sbjct: 237 GQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQ 296

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI- 395
           N+LI  Y + G +  A  +F   S  DL++  SMIT + Q G   EAL L+ +M  +   
Sbjct: 297 NALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFY 356

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            P+ F+  S+ +AC +L   E G+Q+H    KFG   + FAG SL +MYAK G +  A R
Sbjct: 357 QPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIR 416

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
           AF +I    +VSW+A+I   +  G   EA+  F QM+  G++P+ IT +S+LCAC     
Sbjct: 417 AFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVT 476

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           + +      S   K G+         ++ +  +     +A  +   +   AN   W A+L
Sbjct: 477 INQGT-QIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAIL 535

Query: 576 GAARIYKNV-EVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
            A   +K   EV +    MLF+   E    ++ ++ I  +
Sbjct: 536 SACLQHKQAGEVFRLFKLMLFS---ENKPDNITITTILGT 572



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 215/423 (50%), Gaps = 2/423 (0%)

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           S I+    +  ++I AC        G+KIH + +K     D+   N +++MY K G+L+D
Sbjct: 151 SSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKD 210

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A   F  ++  ++VSW  +I+G   +   + A+ ++ QM  S   P+  T+ S +KAC  
Sbjct: 211 ARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCI 270

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
               +LGRQLH  +IK       I    L+ MY + G +  A  +F ++  K+LI+W  +
Sbjct: 271 AGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASM 330

Query: 270 ISGHLQNGGDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           I+G  Q G ++EA  LF  M+R+G    ++    +V  +  S       +Q+H +  K  
Sbjct: 331 ITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFG 390

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
              + +   SL D Y K G +  A++ F +  + DLV+  ++I A++  G   EA+  + 
Sbjct: 391 LGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFC 450

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M    + PD     SLL AC +     QG Q+H +IIK G   +    NSL+ MY KC 
Sbjct: 451 QMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCS 510

Query: 449 SIDDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           ++ DA   F ++ +   +VSW+A++    QH +  E  ++F  ML     P++IT+ ++L
Sbjct: 511 NLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTIL 570

Query: 508 CAC 510
             C
Sbjct: 571 GTC 573


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/643 (36%), Positives = 373/643 (58%), Gaps = 4/643 (0%)

Query: 133 SANALVDMYAKVGNLE--DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           S N L+     +G+L    A +VF      D+++WN+++   V       AL+ + +M  
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71

Query: 191 SEIN-PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              N P+ FT+ S LK CA +   ++G+ LH  ++K  + SD  +   L++MYA CG + 
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            AR +F  M  +N + W  +ISG+++N    EA  L+  M  +G   D+ T++T++ + A
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
             + +GV  ++H+   +   +    + ++L++ Y KCG ++ A ++F + S  D+ A ++
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSA 251

Query: 370 MITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           +I  Y +     EAL+L+ E+     + P+     ++++ACA L   E G+ VH +I + 
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
                    NSL++M++KCG ID A R F  +  + ++SW++M+ GLA HG G+EAL  F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQF 371

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGR 548
             M    + P+ IT + VL AC+HAGLV E K  F  +E  +G++   EHY CM+D+L R
Sbjct: 372 HLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCR 431

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
           AG   EA E +  MP Q + ++WG++LGA R+Y N+E+G+ AA  L  +EP     ++LL
Sbjct: 432 AGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILL 491

Query: 609 SNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
           SNIYA   MW+ V KVR  M +  ++K PG S + + +  ++F  GD SH    EI   L
Sbjct: 492 SNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIML 551

Query: 669 DEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNL 728
            +V + L   GYV      L ++++++KE+ +  HSEKLA+ +GL+ +  G  I + KNL
Sbjct: 552 RQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNL 611

Query: 729 RICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+C DCHT  + +SKI  R+I +RD NRFHHF++GSCSC  YW
Sbjct: 612 RVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 226/427 (52%), Gaps = 22/427 (5%)

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           V++WNS+   +V+ +    A+  + EM+  S   P+ F+  S++  CA   +  +G+ +H
Sbjct: 43  VLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLH 102

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K    SD++    L++MYA  G+L+ A  +F+ + H + V W ++I+G + +   +
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG--RQLHCSLIKMEIKSDPIVGVG 237
            AL L+++M+    +P+  T  + + ACA  ELK+LG   +LH  + +M++K   ++G  
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACA--ELKDLGVGMKLHSHIREMDMKICAVLGSA 220

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF- 296
           LV+MYAKCG +  AR +F  + +K++ AW+ +I G+++N    EA  LF    RE  G  
Sbjct: 221 LVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF----REVAGGS 276

Query: 297 ----DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
               ++ T+  V+ + A    +   + VH    +T       + NSLID + KCG ++ A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
            +IF   S  DL++  SM+   A  GLG EAL  +  MQ  ++ PD      +L AC++ 
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHA 396

Query: 413 SAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI----PDRGIVS 467
              ++GK++   I   +G    +     +V++  + G + +A R F  +    PD  I  
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEA-REFIRVMPLQPDGAI-- 453

Query: 468 WSAMIGG 474
           W +M+G 
Sbjct: 454 WGSMLGA 460



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 225/471 (47%), Gaps = 45/471 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C    +  +G  +HG VV     SD ++  +L+ MYA CG+   +R LF+ +  R+
Sbjct: 85  LLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRN 144

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V W S+ S Y+      EA+  +K+M   G  P+E +++++++ACA   D  +G K+H 
Sbjct: 145 KVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS 204

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  ++         +ALV+MYAK G+L+ A  VF  +   D+ +W+A+I G V +  +  
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 181 ALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL+LF+++   S + PN  T  + + ACA +   E GR +H  + + +      +   L+
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DM++KCG +D A+ IF  M  K+LI+WN +++G   +G   EA + F  M    +  D+ 
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEI 384

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL + +           HA                        G V++  K+F E 
Sbjct: 385 TFIGVLTACS-----------HA------------------------GLVQEGKKLFYEI 409

Query: 360 SAVDLVACTS-----MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            A+  V   S     M+    + GL  EA +    M    + PD  +  S+L AC   + 
Sbjct: 410 EALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM---PLQPDGAIWGSMLGACRVYNN 466

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
            E G++    +++    +D      L N+YA+    ++  +    + ++GI
Sbjct: 467 LELGEEAARCLLELEPTNDGVY-ILLSNIYARRKMWNEVKKVRELMNEKGI 516


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/489 (44%), Positives = 315/489 (64%), Gaps = 2/489 (0%)

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           ++  M  + V  ++ T   ++++     AI   KQ+HA  +K  F +D + +N+LI  Y 
Sbjct: 81  MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYV 140

Query: 345 KCGHVEDAVKIFKESSAVDL--VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
               +E A ++F      D   V+  +MI AY Q     EA  L+  M+   +  D FV 
Sbjct: 141 NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 200

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           +S+L+AC  L A EQGK +H +I K G   D+    ++++MY KCG ++ A   F+E+P 
Sbjct: 201 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 260

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           +GI SW+ MIGGLA HG+G+ A+++F +M  + V P+ IT V+VL AC H+GLV E KH+
Sbjct: 261 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 320

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           F+ M +  G++P  EH+ CM+D+LGRAG  +EA +L++ MP   +A V GAL+GA RI+ 
Sbjct: 321 FQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG 380

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N E+G+   + +  +EP  S  +VLL+N+YASAG W++VAKVR+ M D  +KK PG S I
Sbjct: 381 NTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMI 440

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
           E +  V  F  G R+H ++KEIYAKLDE+ + +   GYVP  +  LHD++E EKE  LY+
Sbjct: 441 ESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYY 500

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+AFGL+ T PG T+R+ KNLRIC DCH + + ISK+  REII+RD NRFHHFR 
Sbjct: 501 HSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRM 560

Query: 763 GSCSCGGYW 771
           G CSC  YW
Sbjct: 561 GGCSCKDYW 569



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 142/262 (54%), Gaps = 3/262 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           +++AC     +  G Q+H  V+  GF +D F  N+L+ MY    +   +RR+FD +P+R 
Sbjct: 100 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 159

Query: 60  -SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            + VSWN++ + YV  + L EA   F  M L  +  ++F  +SM++AC G G    G+ I
Sbjct: 160 RNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWI 219

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HGY  K G + D   A  ++DMY K G LE A  VF ++    I SWN +I G  +H   
Sbjct: 220 HGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKG 279

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG- 237
           + A++LF++M+   + P+  T+ + L ACA   L E G+     + ++      +   G 
Sbjct: 280 EAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGC 339

Query: 238 LVDMYAKCGSMDEARMIFHLMP 259
           +VD+  + G ++EAR + + MP
Sbjct: 340 MVDLLGRAGLLEEARKLINEMP 361



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 180/401 (44%), Gaps = 40/401 (9%)

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S Y+        +  +  M+   + PN+F+   +I AC        G++IH + +K G+ 
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQ 186
           +D FS N L+ MY    +LE A  VF ++   D   VSWNA+IA  V       A  LF 
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           +M+   +  + F   S L AC G+   E G+ +H  + K  I+ D  +   ++DMY KCG
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            +++A  +F+ +P+K + +WN +I G   +G    A  LF  M RE V  D  T   VL 
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           + A           H+  V+       Y+                  ++      ++   
Sbjct: 307 ACA-----------HSGLVEEGKHYFQYM-----------------TEVLGLKPGMEHFG 338

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C  M+    + GL EEA KL  EM    +NPD+ V  +L+ AC      E G+Q+   +I
Sbjct: 339 C--MVDLLGRAGLLEEARKLINEM---PVNPDAGVLGALVGACRIHGNTELGEQIGKKVI 393

Query: 427 KFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
           +   +    +G    L N+YA  G  +D  +    + DRG+
Sbjct: 394 E---LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGV 431



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 161/316 (50%), Gaps = 8/316 (2%)

Query: 184 LFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA 243
           ++ +M    ++PN FTY   ++AC      E G+Q+H  ++K    +D      L+ MY 
Sbjct: 81  MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYV 140

Query: 244 KCGSMDEARMIFHLMPEK--NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
              S+++AR +F  MP++  N ++WN +I+ ++Q+    EA +LF  M  E V  D+   
Sbjct: 141 NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 200

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           +++L +     A+   K +H    K+  E D  +  ++ID Y KCG +E A ++F E   
Sbjct: 201 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 260

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
             + +   MI   A  G GE A++L+ EM+   + PD     ++L+ACA+    E+GK  
Sbjct: 261 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 320

Query: 422 HVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQ 477
             ++ +  G          +V++  + G +++A +  +E+   PD G++   A++G    
Sbjct: 321 FQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL--GALVGACRI 378

Query: 478 HGRGKEALQMFGQMLE 493
           HG  +   Q+  +++E
Sbjct: 379 HGNTELGEQIGKKVIE 394



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 7/236 (2%)

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C    + Y ++ L    + +Y  M  + ++P+ F    L+ AC    A E+GKQ+H H++
Sbjct: 62  CAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVL 121

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEA 484
           KFGF +D F+ N+L++MY    S++ A R F  +P  DR  VSW+AMI    Q  R  EA
Sbjct: 122 KFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEA 181

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
             +F +M  + V+ +     S+L AC   G + + K     +EK  GI+   +    +ID
Sbjct: 182 FALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVID 240

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           +  + G  ++A E+ + +P Q   S W  ++G   ++     G+ A E+   +E E
Sbjct: 241 MYCKCGCLEKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEMERE 292


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/640 (38%), Positives = 363/640 (56%), Gaps = 38/640 (5%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+  YA + ++  A  VF +I   +++  N +I   V +      +K+F  M    + P+
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            +T+   LKAC+      +GR++H S  K+ + S   VG GLV MY KCG + EAR++  
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M  +++++WN ++ G+ QN    +A  +   M    +  D  T++++L +V++     V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
                 + VK  F                        K+ K+S    LV+   MI  Y +
Sbjct: 260 ------MYVKDMF-----------------------FKMGKKS----LVSWNVMIGVYMK 286

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             +  EA++LY  M+     PD+   +S+L AC + SA   GK++H +I +   + +   
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            N+L++MYAKCG ++ A   F  +  R +VSW+AMI      GRG +A+ +F ++ + G+
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           +P+ I  V+ L AC+HAGL+ E +  F+ M   + I P  EH ACM+D+LGRAGK +EA 
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
             +  M  + N  VWGALLGA R++ + ++G  AA+ LF + PE+S  +VLLSNIYA AG
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W+ V  +R  MK   LKK PG S +EV   ++TF VGDRSH +S EIY +LD +   + 
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP-----PGATIRVKKNLRIC 731
           + GYVP  E+ LHDVEE +KE  L  HSEKLA+ F L+ T         TIR+ KNLRIC
Sbjct: 587 ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRIC 646

Query: 732 VDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            DCH + + IS+I SREII+RD NRFH FR G CSCG YW
Sbjct: 647 GDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 265/552 (48%), Gaps = 80/552 (14%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VH  ++      +  +   L+  YA   +   +R++FD IPER+V+  N +   YV+  F
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
             E V  F  M    +RP+ ++   ++ AC+ SG  ++GRKIHG + K+G  S +F  N 
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           LV MY K G L +A  V  ++   D+VSWN+++ G   ++  D AL++ ++M+S +I+ +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T  S L A +    + +          M +K          DM+ K G          
Sbjct: 241 AGTMASLLPAVSNTTTENV----------MYVK----------DMFFKMG---------- 270

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
              +K+L++WN++I  +++N   +EA  L+  M  +G   D  ++++VL +     A+ +
Sbjct: 271 ---KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K++H    +     +  + N+LID Y KCG +E A  +F+   + D+V+ T+MI+AY  
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G G +A+ L+ ++QD  + PDS    + L AC++    E+G+        F  M+D + 
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC------FKLMTDHY- 440

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
                                 +I  R +   + M+  L + G+ KEA +    M    +
Sbjct: 441 ----------------------KITPR-LEHLACMVDLLGRAGKVKEAYRFIQDM---SM 474

Query: 497 LPNHITLVSVLCACN-HA----GLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAG 550
            PN     ++L AC  H+    GL+A         +K F + P Q  +Y  + +I  +AG
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAA--------DKLFQLAPEQSGYYVLLSNIYAKAG 526

Query: 551 KFQEAMELVDTM 562
           +++E   + + M
Sbjct: 527 RWEEVTNIRNIM 538



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 175/361 (48%), Gaps = 35/361 (9%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           R +H  +I  +++ +  +GV L+  YA    +  AR +F  +PE+N+I  N++I  ++ N
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   E   +F  M    V  D  T   VLK+ +    I + +++H  + K    S  ++ 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N L+  YGKCG + +A  +  E S  D+V+  S++  YAQ    ++AL++  EM+  +I+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            D+   +SLL A +N +        +V  +K              +M+ K G        
Sbjct: 239 HDAGTMASLLPAVSNTTTE------NVMYVK--------------DMFFKMGK------- 271

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
                 + +VSW+ MIG   ++    EA++++ +M  DG  P+ +++ SVL AC     +
Sbjct: 272 ------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
           +  K     +E+K  I  +    A +ID+  + G  ++A ++ + M  +   S W A++ 
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENA-LIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMIS 383

Query: 577 A 577
           A
Sbjct: 384 A 384



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 52/370 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+    + +G ++HG     G  S  FV N LV MY KCG   ++R + D +  R 
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL   Y      ++A+   +EM            S  I+  AG+  SLL    + 
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREME-----------SVKISHDAGTMASLLPAVSNT 254

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +  + Y  DMF                     FK +    +VSWN +I   + +     
Sbjct: 255 TTENVMYVKDMF---------------------FK-MGKKSLVSWNVMIGVYMKNAMPVE 292

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L+ +M++    P+  + TS L AC       LG+++H  + + ++  + ++   L+D
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +++AR +F  M  +++++W  +IS +  +G   +A +LF  +   G+      
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL------ 406

Query: 301 LSTVLKSVASFQAIGVCKQVHALSV-KTAFE--SDDYIVNS-------LIDAYGKCGHVE 350
              V  S+A    +  C     L   ++ F+  +D Y +         ++D  G+ G V+
Sbjct: 407 ---VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463

Query: 351 DAVKIFKESS 360
           +A +  ++ S
Sbjct: 464 EAYRFIQDMS 473



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 13/339 (3%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q T+  + + + ++  I   + VH+  +      +  +   L+ AY     V  A K+F 
Sbjct: 39  QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFD 98

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    +++    MI +Y   G   E +K++  M    + PD +    +L AC+       
Sbjct: 99  EIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+++H    K G  S  F GN LV+MY KCG + +A     E+  R +VSW++++ G AQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           + R  +AL++  +M    +  +  T+ S+L A ++     E   + + M  K G + +  
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS 276

Query: 538 HYACMIDILGRAGKFQEAMELVDTMP---FQANASVWGALLGAARIYKNVEVGQHAAEML 594
            +  MI +  +     EA+EL   M    F+ +A    ++L A      + +G+   ++ 
Sbjct: 277 -WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK---KIH 332

Query: 595 FAIEPEKSSTHVLLSN----IYASAGMWDNVAKVRRFMK 629
             IE +K   ++LL N    +YA  G  +    V   MK
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/554 (39%), Positives = 345/554 (62%), Gaps = 1/554 (0%)

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +IK    SD  +G  LV MY K G  ++A+ +F  MP K+L++WN ++SG    G 
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 279 DMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
                + F  M  E G   ++ TL +V+ + A   A+   K +H + VK        +VN
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SLI+ YGK G ++ A ++F+E     LV+  SM+  +   G  E+ + L+  M+   INP
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D     +LL AC +     Q + +H +I + GF +D     +L+N+YAK G ++ ++  F
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
            EI DR  ++W+AM+ G A H  G+EA+++F  M+++GV  +H+T   +L AC+H+GLV 
Sbjct: 324 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 383

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E K +FE M + + ++P  +HY+CM+D+LGR+G+ ++A EL+ +MP + ++ VWGALLGA
Sbjct: 384 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 443

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R+Y NVE+G+  AE L +++P     +++LSNIY++AG+W + +KVR  MK+ +L + P
Sbjct: 444 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNP 503

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G S+IE  +K++ F VGD+ H RS EI+ KL+E+   + +AG  P  E  LHD++E  K 
Sbjct: 504 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKV 563

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            ++  HSEKLA+AFGL+ T  G  + + KNLRIC DCH++ +F S +  R II+RD  RF
Sbjct: 564 DMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRF 623

Query: 758 HHFRNGSCSCGGYW 771
           HHF +G CSC  YW
Sbjct: 624 HHFADGLCSCRDYW 637



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 220/457 (48%), Gaps = 47/457 (10%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  V+ +   SD F+ + LV MY K G   D++RLFD +P + +VSWNSL S      +
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 77  LEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           L   +  F  M   SG +PNE +L S+++ACA  G    G+ +HG  +KLG        N
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKSSE 192
           +L++MY K+G L+ A  +F+++    +VSWN+++   V+H HN +A K   LF  MK + 
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV---VIHNHNGYAEKGMDLFNLMKRAG 260

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           INP+  T  + L+AC    L      +H  + +    +D I+   L+++YAK G ++ + 
Sbjct: 261 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 320

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  + +++ IAW  +++G+  +    EA  LF  M +EGV  D  T + +L + +   
Sbjct: 321 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 380

Query: 313 AIGVCK---QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
            +   K   ++ +   +     D Y  + ++D  G+ G +EDA ++ K           S
Sbjct: 381 LVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIK-----------S 427

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M                        + P S V  +LL AC      E GK+V   ++   
Sbjct: 428 M-----------------------PMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD 464

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
             SD      L N+Y+  G   DA +  + + +R + 
Sbjct: 465 -PSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLT 500



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 141/262 (53%), Gaps = 5/262 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC     L  G  +HG+VV  G      V NSL+ MY K G    + +LF+ +P RS
Sbjct: 170 VVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS 229

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+   + H  + E+ +  F  M  +GI P++ ++ +++ AC  +G       IH 
Sbjct: 230 LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHA 289

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G+++D+  A AL+++YAK+G L  +  +F++I+  D ++W A++AG  +H     
Sbjct: 290 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGRE 349

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR---QLHCSLIKMEIKSDPIVGVG 237
           A+KLF  M    +  +  T+T  L AC+   L E G+   ++   + ++E + D      
Sbjct: 350 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SC 407

Query: 238 LVDMYAKCGSMDEARMIFHLMP 259
           +VD+  + G +++A  +   MP
Sbjct: 408 MVDLLGRSGRLEDAYELIKSMP 429


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/765 (33%), Positives = 413/765 (53%), Gaps = 13/765 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  V+ +G+    F++N L+ MYA+  +  D+  L D +P R+ +SWN++      
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQ 90

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                 ++ FF+ M+  G  P+     S+I A     +   G  +  ++ K G+D     
Sbjct: 91  AGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---GEIVQEFAEKSGFDRSFVV 147

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             AL+ MY + G L+ A   F  I+   +VSWNA+I      +  + +L++F++M    I
Sbjct: 148 GTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGI 207

Query: 194 NPNMFTYTSALKACAGMELK--ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            PN  T      A AG+  K    G  +H   I   + S   V   +++++ + G++  A
Sbjct: 208 APNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRA 267

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             IF  M  +++ +WN +IS   QNG    A  L+  M    +  D  T   VL++    
Sbjct: 268 NDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFVNVLEACDCP 324

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
             +   + +H       ++SD  +  +L+  Y +CG ++ A ++F       ++   ++I
Sbjct: 325 DDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAII 384

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGF 430
            A+AQFG  + +L  + +M    I P  F   ++L ACA   A     + +H  + +   
Sbjct: 385 AAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPG 444

Query: 431 ---MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
                D    N+LVNMYAKCG +D A   F   P   + +W+A++ G AQHG    A+++
Sbjct: 445 DCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRL 504

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
             +M   G+ P+ I+  + L A +HA  V +    F ++ + +G+ P  EHY  ++D+LG
Sbjct: 505 LYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLG 564

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           RAG  +EA   + +M   A+A+ W ALLGA RI+K+ +    AAE + AI+P   +++ +
Sbjct: 565 RAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTV 624

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN+Y++AG WD   ++RR M +N  +KEPG SWIEVK++V+ F V DRSH R+ EIY +
Sbjct: 625 LSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYER 684

Query: 668 LDEVSDLL-NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
           LDE+  +L ++  YVP V + LHDVE+  +E LL+HHSEKLA+ FGLI T  G+ I + K
Sbjct: 685 LDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIK 744

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLRIC DCH   +  SK   REI+VRD  RFHHF  G+CSC   W
Sbjct: 745 NLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           E GR++H  +I+        +   L+ MYA+  S  +A ++   MP +N ++WN VI  +
Sbjct: 29  EQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRAN 88

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            Q G    +   F  M ++G   D     +++K+  + Q   +   V   + K+ F+   
Sbjct: 89  AQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEI---VQEFAEKSGFDRSF 145

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            +  +LI  YG+CG ++ A   F       +V+  ++IT Y++    E++L+++ EM  +
Sbjct: 146 VVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQ 205

Query: 394 EINPDSFVCSSLLNACANLSA--YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
            I P++     + +A A ++A     G  +H   I  G +S T   NS++N++ + G+I 
Sbjct: 206 GIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNIT 265

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A+  F ++  R + SW+ MI   AQ+G    AL ++G+M    + P+ +T V+VL AC+
Sbjct: 266 RANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFVNVLEACD 322



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 138/263 (52%), Gaps = 5/263 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC    DL  G  +H  V   G+DSD  VA +LV MY +CG    +  +F AI    
Sbjct: 317 VLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPG 376

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI-NACAGSGDSLLGRKIH 119
           V++ N++ + +      + ++  F++M+  GIRP++F+L +++         +  GR +H
Sbjct: 377 VITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLH 436

Query: 120 GYSIKLGYD---SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            +  +   D    D+   NALV+MYAK G+L+ A  +F      ++ +WNA++AG   H 
Sbjct: 437 RWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHG 496

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           + + A++L  +M+ + I+P+  ++T+AL A +     E G ++  ++ +       +   
Sbjct: 497 YANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHY 556

Query: 237 G-LVDMYAKCGSMDEARMIFHLM 258
           G +VD+  + G ++EA      M
Sbjct: 557 GAVVDLLGRAGWLEEAEGFLRSM 579



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 9/165 (5%)

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           ++ EQG+++H  +I+ G+    F  N L++MYA+  S  DA+     +P R  +SW+A+I
Sbjct: 26  TSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVI 85

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN--HAGLVAEAKHHFESMEKKF 530
              AQ G    +L  F +ML+DG LP+ +  +S++ A      G + +        ++ F
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIVQEFAEKSGFDRSF 145

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            +         +I + GR G+   A +  D +  +   S W AL+
Sbjct: 146 VVG------TALIGMYGRCGRLDRAKDAFDRIQERGVVS-WNALI 183


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/739 (34%), Positives = 401/739 (54%), Gaps = 60/739 (8%)

Query: 37  VVMYAKCGNFIDSRRLFD--AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP 94
           +  YA+ G    +R++FD   +P R+V SWN++ + Y       EA+  F++M     + 
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMP----QR 84

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           N  S + +I+    +G     R++         D ++ S  ++V  Y + G++ +A  +F
Sbjct: 85  NTVSWNGLISGHIKNGMLSEARRV----FDTMPDRNVVSWTSMVRGYVRNGDVAEAERLF 140

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA-CAGMELK 213
             + H ++VSW  ++ G +     D A KLF  M   ++       T+ +   C    L 
Sbjct: 141 WHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDV----VAVTNMIGGYCEEGRLD 196

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           E  R L   + K  +    +    +V  YA+ G +D AR +F +MPE+N ++W  ++ G+
Sbjct: 197 E-ARALFDEMPKRNV----VTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGY 251

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
             +G   EA+SLF                                   A+ VK       
Sbjct: 252 THSGRMREASSLF----------------------------------DAMPVKPVV---- 273

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N +I  +G  G V+ A ++FK     D    ++MI  Y + G   EAL L+  MQ  
Sbjct: 274 -VCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQRE 332

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            +  +     S+L+ C +L++ + GKQVH  +++  F  D +  + L+ MY KCG++  A
Sbjct: 333 GLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRA 392

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            + F+  P + +V W++MI G +QHG G+EAL +F  M   GV P+ +T + VL AC+++
Sbjct: 393 KQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYS 452

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           G V E    FE+M+ K+ ++P  EHYAC++D+LGRA +  EAM+LV+ MP + +A VWGA
Sbjct: 453 GKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGA 512

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
           LLGA R +  +++ + A E L  +EP+ +  +VLLSN+YA  G W +V  +R  +K   +
Sbjct: 513 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSV 572

Query: 634 KKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
            K PG SWIEV+ KV+ FT GD + H     I   L+++  LL +AGY P     LHDV+
Sbjct: 573 TKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVD 632

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
           E EK   L +HSEKLAVA+GL+  P G  IRV KNLR+C DCH++ + I+K+  REII+R
Sbjct: 633 EEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILR 692

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D NRFHHF++G CSC  YW
Sbjct: 693 DANRFHHFKDGHCSCKDYW 711



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 218/448 (48%), Gaps = 20/448 (4%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N L+  + K G   ++RR+FD +P+R+VVSW S+   YV    + EA   F  M      
Sbjct: 90  NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP----H 145

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
            N  S + M+      G     RK+      +  + D+ +   ++  Y + G L++A A+
Sbjct: 146 KNVVSWTVMLGGLLQEGRVDDARKL----FDMMPEKDVVAVTNMIGGYCEEGRLDEARAL 201

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F ++   ++V+W A+++G   +   D A KLF+ M       N  ++T+ L     +   
Sbjct: 202 FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER----NEVSWTAML-----LGYT 252

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDM-YAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
             GR    S +   +   P+V    + M +   G +D+AR +F  M E++   W+ +I  
Sbjct: 253 HSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKV 312

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           + + G ++EA  LF  M REG+  +  +L +VL    S  ++   KQVHA  V++ F+ D
Sbjct: 313 YERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQD 372

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
            Y+ + LI  Y KCG++  A ++F      D+V   SMIT Y+Q GLGEEAL ++ +M  
Sbjct: 373 LYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCS 432

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
             + PD      +L+AC+     ++G ++      K+           LV++  +   ++
Sbjct: 433 SGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVN 492

Query: 452 DADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +A +   ++P +   + W A++G    H
Sbjct: 493 EAMKLVEKMPMEPDAIVWGALLGACRTH 520



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 199/452 (44%), Gaps = 66/452 (14%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + D     +++  Y + G   ++R LFD +P+R+VV+W ++ S Y     ++ A   F+ 
Sbjct: 176 EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEV 235

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA---------NAL 137
           M       NE S ++M          LLG   + +S ++   S +F A         N +
Sbjct: 236 MP----ERNEVSWTAM----------LLG---YTHSGRMREASSLFDAMPVKPVVVCNEM 278

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           +  +   G ++ A  VFK ++  D  +W+A+I       +   AL LF++M+   +  N 
Sbjct: 279 IMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNF 338

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
            +  S L  C  +   + G+Q+H  L++ E   D  V   L+ MY KCG++  A+ +F+ 
Sbjct: 339 PSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNR 398

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
            P K+++ WN +I+G+ Q+G   EA ++F  M   GV  D  T   VL S  S+      
Sbjct: 399 FPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVL-SACSYSG---- 453

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGH-VEDAVKIFKESSAVDLVACTSMITAYAQ 376
                  VK   E  + +         KC + VE  ++ +  +  VDL+     +     
Sbjct: 454 ------KVKEGLELFETM---------KCKYQVEPGIEHY--ACLVDLLGRADQVN---- 492

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
                EA+KL  +M    + PD+ V  +LL AC     + +     V + K   +    A
Sbjct: 493 -----EAMKLVEKMP---MEPDAIVWGALLGAC---RTHMKLDLAEVAVEKLAQLEPKNA 541

Query: 437 GNS--LVNMYAKCGSIDDADRAFSEIPDRGIV 466
           G    L NMYA  G   D +    +I  R + 
Sbjct: 542 GPYVLLSNMYAYKGRWRDVEVLREKIKARSVT 573



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 14/243 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S   L  G QVH  +V + FD D +VA+ L+ MY KCGN + ++++F+  P + 
Sbjct: 344 VLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKD 403

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VV WNS+ + Y      EEA+  F +M  SG+ P++ +   +++AC+ SG    G ++  
Sbjct: 404 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFE 463

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               K   +  +     LVD+  +   + +A+ + + +   PD + W A++  C  H   
Sbjct: 464 TMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKL 523

Query: 179 DW---ALKLFQQMKSSEINP-----NMFTYTSALKACAGMELKELGRQLH----CSLIKM 226
           D    A++   Q++     P     NM+ Y    +    +  K   R +     CS I++
Sbjct: 524 DLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEV 583

Query: 227 EIK 229
           E K
Sbjct: 584 EKK 586



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 16/170 (9%)

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSE--IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
           T + +  +  YA+ G +D A + F E  +P R + SW+AM+    +  + +EAL +F +M
Sbjct: 22  TTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM 81

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
            +     N ++   ++      G+++EA+  F++M  +  +      +  M+    R G 
Sbjct: 82  PQR----NTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVS-----WTSMVRGYVRNGD 132

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
             EA  L   MP + N   W  +LG       V+     A  LF + PEK
Sbjct: 133 VAEAERLFWHMPHK-NVVSWTVMLGGLLQEGRVD----DARKLFDMMPEK 177


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/673 (35%), Positives = 385/673 (57%), Gaps = 6/673 (0%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
            Q+   +V + FD D +V   L+  Y K GN   +R +FDA+PE+S V+W ++ S  V  
Sbjct: 168 FQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
                ++  F +++   + P+ + LS++++AC+       G++IH + ++ G++ D    
Sbjct: 228 GRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLM 287

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           N L+D Y K G +  A  +F  + + +I+SW  +++G   +  +  A++LF  M    + 
Sbjct: 288 NVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLK 347

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+MF  +S L +CA +   E G Q+H   IK  + +D  V   L+DMYAKC  + EAR +
Sbjct: 348 PDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKV 407

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDME---AASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           F +    +++ +N +I G+ + G   E   A ++F  M    +     T  ++L++ AS 
Sbjct: 408 FDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASL 467

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            ++G+ KQ+H L  K     D +  ++LI  Y  C  ++D+  +F E    DLV   SM 
Sbjct: 468 TSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
           + Y Q    EEAL L+LE+Q     PD F    ++ A  NL++ + G++ H  ++K G  
Sbjct: 528 SGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLE 587

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            + +  N+L++MYAKCGS +DA +AF     R +V W+++I   A HG G++ALQM  +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKM 647

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
           + +G+ PN+IT V VL AC+HAGLV +    FE M  +FGI+P  EHY CM+ +LGRAG+
Sbjct: 648 MCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGR 706

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
             EA EL++ MP +  A VW +LL       NVE+ ++AAEM    +P+ S +  LLSNI
Sbjct: 707 LNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNI 766

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV 671
           YAS GMW +  KVR  MK   + KEPG SWIE+  +V+ F   D+SH ++ +IY  LD++
Sbjct: 767 YASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDL 826

Query: 672 SDLLNKAGYVPMV 684
             L+   G++ ++
Sbjct: 827 --LVQIRGHMKLI 837



 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 180/587 (30%), Positives = 315/587 (53%), Gaps = 17/587 (2%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VHG ++ +G + D +++N L+ +Y++ G  + +R++F+ +PER++V+W+++ S   H  F
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 77  LEEAVCFFKEMVLSGIR-PNEFSLSSMINACAGSGDSLLGR----KIHGYSIKLGYDSDM 131
            EE++  F +   +    PNE+ LSS I AC+G   S  GR    ++  + +K  +D D+
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS--GRWMVFQLQSFLVKSRFDRDV 183

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           +    L+D Y K GN++ A  VF  +     V+W  +I+GCV    +  +L+LF Q+   
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            + P+ +  ++ L AC+ +   E G+Q+H  +++   + D  +   L+D Y KCG +  A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAA 303

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
             +F  MP KN+I+W  ++SG+ QN    EA  LF  M + G+  D    S++L S AS 
Sbjct: 304 HKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMI 371
            A+    QVHA ++K    +D Y+ NSLID Y KC  + +A K+F   +A D+V   +MI
Sbjct: 364 HALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMI 423

Query: 372 TAYAQFGLGEE---ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
             Y++ G   E   AL ++ +M+ R I P      SLL A A+L++    KQ+H  + KF
Sbjct: 424 EGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKF 483

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
           G   D FAG++L+ +Y+ C  + D+   F E+  + +V W++M  G  Q    +EAL +F
Sbjct: 484 GLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLF 543

Query: 489 GQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
            ++      P+  T V ++ A  N A L    + H + +++     P   +   ++D+  
Sbjct: 544 LELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITN--ALLDMYA 601

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
           + G  ++A +  D+     +   W +++ +   Y N   G+ A +ML
Sbjct: 602 KCGSPEDAHKAFDSAA-SRDVVCWNSVISS---YANHGEGRKALQML 644



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 277/538 (51%), Gaps = 19/538 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G Q+H  ++  G + D  + N L+  Y KCG    + +LFD +P ++
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKN 314

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW +L S Y      +EA+  F  M   G++P+ F+ SS++ +CA       G ++H 
Sbjct: 315 IISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHA 374

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y+IK    +D +  N+L+DMYAK   L +A  VF      D+V +NA+I G         
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWE 434

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           LH+    AL +F  M+   I P++ T+ S L+A A +    L +Q+H  + K  +  D  
Sbjct: 435 LHD----ALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIF 490

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
            G  L+ +Y+ C  + ++R++F  M  K+L+ WN + SG++Q   + EA +LF  +    
Sbjct: 491 AGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSR 550

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D+ T   ++ +  +  ++ + ++ H   +K   E + YI N+L+D Y KCG  EDA 
Sbjct: 551 DRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F  +++ D+V   S+I++YA  G G +AL++  +M    I P+      +L+AC++  
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAG 670

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMI 472
             E G +    +++FG   +T     +V++  + G +++A     ++P +   + W +++
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLL 730

Query: 473 GGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
            G A+ G     + A +M   +L D       TL+S + A    G+  +AK   E M+
Sbjct: 731 SGCAKAGNVELAEYAAEM--AILSDPKDSGSFTLLSNIYASK--GMWTDAKKVRERMK 784


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/554 (39%), Positives = 345/554 (62%), Gaps = 1/554 (0%)

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +IK    SD  +G  LV MY K G  ++A+ +F  MP K+L++WN ++SG    G 
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 279 DMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
                + F  M  E G   ++ TL +V+ + A   A+   K +H + VK        +VN
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SLI+ YGK G ++ A ++F+E     LV+  SM+  +   G  E+ + L+  M+   INP
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D     +LL AC +     Q + +H +I + GF +D     +L+N+YAK G ++ ++  F
Sbjct: 321 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 380

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
            EI DR  ++W+AM+ G A H  G+EA+++F  M+++GV  +H+T   +L AC+H+GLV 
Sbjct: 381 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 440

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E K +FE M + + ++P  +HY+CM+D+LGR+G+ ++A EL+ +MP + ++ VWGALLGA
Sbjct: 441 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 500

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R+Y NVE+G+  AE L +++P     +++LSNIY++AG+W + +KVR  MK+ +L + P
Sbjct: 501 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNP 560

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G S+IE  +K++ F VGD+ H RS EI+ KL+E+   + +AG  P  E  LHD++E  K 
Sbjct: 561 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKV 620

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            ++  HSEKLA+AFGL+ T  G  + + KNLRIC DCH++ +F S +  R II+RD  RF
Sbjct: 621 DMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRF 680

Query: 758 HHFRNGSCSCGGYW 771
           HHF +G CSC  YW
Sbjct: 681 HHFADGLCSCRDYW 694



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 220/457 (48%), Gaps = 47/457 (10%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  V+ +   SD F+ + LV MY K G   D++RLFD +P + +VSWNSL S      +
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 77  LEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           L   +  F  M   SG +PNE +L S+++ACA  G    G+ +HG  +KLG        N
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKSSE 192
           +L++MY K+G L+ A  +F+++    +VSWN+++   V+H HN +A K   LF  MK + 
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV---VIHNHNGYAEKGMDLFNLMKRAG 317

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           INP+  T  + L+AC    L      +H  + +    +D I+   L+++YAK G ++ + 
Sbjct: 318 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 377

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  + +++ IAW  +++G+  +    EA  LF  M +EGV  D  T + +L + +   
Sbjct: 378 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 437

Query: 313 AIGVCK---QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
            +   K   ++ +   +     D Y  + ++D  G+ G +EDA ++ K           S
Sbjct: 438 LVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIK-----------S 484

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           M                        + P S V  +LL AC      E GK+V   ++   
Sbjct: 485 M-----------------------PMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD 521

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
             SD      L N+Y+  G   DA +  + + +R + 
Sbjct: 522 -PSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLT 557



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 233/502 (46%), Gaps = 45/502 (8%)

Query: 37  VVMYAKCGNFIDSRRLF-----DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           +V   +CG  I   R F     D IP++        F+    C    EA  F   +V S 
Sbjct: 69  IVSPVRCGTSISHNRSFAFRHTDLIPKQF-----KRFNTNKGCCIFREASQFI--VVYSI 121

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           ++   F++SS  +    S        IH   IK    SD F  + LV MY K+G  EDA 
Sbjct: 122 VQSLVFAISSCTSVSYCSA-------IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQ 174

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGM 210
            +F ++ + D+VSWN++++G     +    L  F +M++ S   PN  T  S + ACA M
Sbjct: 175 RLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADM 234

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
              + G+ LH  ++K+ +     V   L++MY K G +D A  +F  MP ++L++WN ++
Sbjct: 235 GALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV 294

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
             H  NG   +   LF  M R G+  DQ T+  +L++          + +HA   +  F 
Sbjct: 295 VIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFN 354

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           +D  I  +L++ Y K G +  +  IF+E    D +A T+M+  YA    G EA+KL+  M
Sbjct: 355 ADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLM 414

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA-------GNSLVNM 443
               +  D    + LL+AC++    E+GK+       F  MS+ +         + +V++
Sbjct: 415 VKEGVEVDHVTFTHLLSACSHSGLVEEGKKY------FEIMSEVYRVEPRLDHYSCMVDL 468

Query: 444 YAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGR---GKEALQMFGQMLEDGVL 497
             + G ++DA      +   P  G+  W A++G    +G    GKE  +     L+    
Sbjct: 469 LGRSGRLEDAYELIKSMPMEPSSGV--WGALLGACRVYGNVELGKEVAEQL-LSLDPSDH 525

Query: 498 PNHITLVSVLCACNHAGLVAEA 519
            N+I L ++  A   AGL  +A
Sbjct: 526 RNYIMLSNIYSA---AGLWRDA 544



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 141/262 (53%), Gaps = 5/262 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC     L  G  +HG+VV  G      V NSL+ MY K G    + +LF+ +P RS
Sbjct: 227 VVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS 286

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+   + H  + E+ +  F  M  +GI P++ ++ +++ AC  +G       IH 
Sbjct: 287 LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHA 346

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G+++D+  A AL+++YAK+G L  +  +F++I+  D ++W A++AG  +H     
Sbjct: 347 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGRE 406

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR---QLHCSLIKMEIKSDPIVGVG 237
           A+KLF  M    +  +  T+T  L AC+   L E G+   ++   + ++E + D      
Sbjct: 407 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SC 464

Query: 238 LVDMYAKCGSMDEARMIFHLMP 259
           +VD+  + G +++A  +   MP
Sbjct: 465 MVDLLGRSGRLEDAYELIKSMP 486


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/658 (35%), Positives = 375/658 (56%), Gaps = 38/658 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + +H     L +  +      L+  YA  G    A  VF  I   +++ +N +I   + +
Sbjct: 52  KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
              D AL +F+ M S   +P+ +TY   LKAC+  +   +G QLH ++ K+ +  +  VG
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVG 171

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
            GL+ +Y KCG + EAR +   M  K++++WN +++G+ QN                 + 
Sbjct: 172 NGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQN-----------------MQ 214

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG--HVEDAV 353
           FD               A+ +C+++  +  K     D   + SL+ A       +V    
Sbjct: 215 FDD--------------ALDICREMDGVRQK----PDACTMASLLPAVTNTSSENVLYVE 256

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F       LV+   MI+ Y +  +  +++ LYL+M   E+ PD+  C+S+L AC +LS
Sbjct: 257 EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLS 316

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A   G+++H ++ +     +    NSL++MYA+CG ++DA R F  +  R + SW+++I 
Sbjct: 317 ALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLIS 376

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
                G+G  A+ +F +M   G  P+ I  V++L AC+H+GL+ E K +F+ M   + I 
Sbjct: 377 AYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKIT 436

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P+ EH+AC++D+LGR+G+  EA  ++  MP + N  VWGALL + R+Y N+++G  AA+ 
Sbjct: 437 PIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADK 496

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  + PE+S  +VLLSNIYA AG W  V  +R  MK  +++K PG+S +E+ ++V+TF  
Sbjct: 497 LLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLA 556

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GD  H +SKEIY +L  +   + + GYVP  ++ LHDVEE +KE  L  HSEKLA+ F +
Sbjct: 557 GDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAI 616

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + T   + IR+ KNLR+C DCH + + ISKIV REI++RD NRFHHF++G CSCG YW
Sbjct: 617 LNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 220/453 (48%), Gaps = 46/453 (10%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            VH  V    F  +  +   L+  YA  G    +R +FD IPER+V+ +N +   Y++  
Sbjct: 53  NVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNH 112

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             ++A+  F++MV  G  P+ ++   ++ AC+ S +  +G ++HG   K+G D ++F  N
Sbjct: 113 LYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGN 172

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            L+ +Y K G L +A  V  +++  D+VSWN+++AG   +   D AL + ++M      P
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           +  T  S L A      + +                         +Y +         +F
Sbjct: 233 DACTMASLLPAVTNTSSENV-------------------------LYVE--------EMF 259

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             + +K+L++WN++IS +++N    ++  L+  M +  V  D  T ++VL++     A+ 
Sbjct: 260 MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALL 319

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + +++H    +     +  + NSLID Y +CG +EDA ++F      D+ + TS+I+AY 
Sbjct: 320 LGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYG 379

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G  A+ L+ EMQ+   +PDS    ++L+AC++     +GK        F  M+D +
Sbjct: 380 MTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGK------FYFKQMTDDY 433

Query: 436 AGNS-------LVNMYAKCGSIDDADRAFSEIP 461
                      LV++  + G +D+A     ++P
Sbjct: 434 KITPIIEHFACLVDLLGRSGRVDEAYNIIKQMP 466



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 56/370 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+   +L +GLQ+HG V   G D + FV N L+ +Y KCG   ++R + D +  + 
Sbjct: 139 VLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKD 198

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR--PNEFSLSSMINACAGSGDSLLGRKI 118
           VVSWNS+ + Y      ++A+   +EM   G+R  P+  +++S++ A   +         
Sbjct: 199 VVSWNSMVAGYAQNMQFDDALDICREM--DGVRQKPDACTMASLLPAVTNTS-------- 248

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
                         S N L   Y +         +F ++E   +VSWN +I+  + +   
Sbjct: 249 --------------SENVL---YVE--------EMFMNLEKKSLVSWNVMISVYMKNSMP 283

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             ++ L+ QM   E+ P+  T  S L+AC  +    LGR++H  + + ++  + ++   L
Sbjct: 284 GKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSL 343

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +DMYA+CG +++A+ +F  M  +++ +W  +IS +   G    A +LF  M   G   D 
Sbjct: 344 IDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPD- 402

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSV-KTAFE--SDDYIVNS-------LIDAYGKCGH 348
                   S+A    +  C     L+  K  F+  +DDY +         L+D  G+ G 
Sbjct: 403 --------SIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGR 454

Query: 349 VEDAVKIFKE 358
           V++A  I K+
Sbjct: 455 VDEAYNIIKQ 464



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 23/336 (6%)

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           K +  +  I   K VH+     +F  +  +   L+ AY   G    A  +F      +++
Sbjct: 40  KVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVI 99

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
               MI +Y    L ++AL ++ +M     +PD +    +L AC+       G Q+H  +
Sbjct: 100 FYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAV 159

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
            K G   + F GN L+ +Y KCG + +A     E+  + +VSW++M+ G AQ+ +  +AL
Sbjct: 160 FKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDAL 219

Query: 486 QMFGQMLEDGVL--PNHITLVSVLCACNHAGL--VAEAKHHFESMEKK--------FGIQ 533
            +  +M  DGV   P+  T+ S+L A  +     V   +  F ++EKK          + 
Sbjct: 220 DICREM--DGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVY 277

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
                    +D+  + GK +   + +             ALL   RI++ VE  +    M
Sbjct: 278 MKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNM 337

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           L     E S     L ++YA  G  ++  +V   MK
Sbjct: 338 LL----ENS-----LIDMYARCGCLEDAKRVFDRMK 364


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/737 (34%), Positives = 397/737 (53%), Gaps = 82/737 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C  KK    G  +H  ++ +    D F++N L+  YAKC     SRRLFD +P+R 
Sbjct: 11  LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMIN--ACAGSGDSLLGRKI 118
           + +WN++   Y     LE+A   F EM    I      +S++    AC    D   GR+ 
Sbjct: 71  IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRC 130

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG SIK+G D++++  NAL+ MYAK   + DA+  F D+  P+ VS+ A++ G    +  
Sbjct: 131 HGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV 190

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL--------------GRQLHCSLI 224
           + A +LF+ M  + I+ +  + +S L  C+     E               G+Q+HC  I
Sbjct: 191 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 250

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ--------- 275
           K   +SD  +   L+DMYAK G+MD A MIF  MPE ++++WN++I+G+ Q         
Sbjct: 251 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 310

Query: 276 -------------------------NGGDMEAA----------SLFPW------------ 288
                                      GD+EA           SL  W            
Sbjct: 311 YLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNEN 370

Query: 289 ------MYRE----GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
                 ++RE     V  D+TTL+ +L S+A    +   +QVHA+S K  F +D Y+ + 
Sbjct: 371 HKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASG 430

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           LI  Y KCG VE A +IF   + +D+V   SM+   +   L +EA   + +M+++ + P 
Sbjct: 431 LIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPS 490

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            F  +++L+ CA LS+  QG+QVH  I + G+M+D F G++L++MY+KCG +D A   F 
Sbjct: 491 QFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFD 550

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            +  +  V+W+ MI G AQ+G G EA+ ++  M+  G  P+ IT V+VL AC+H+GLV  
Sbjct: 551 MMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDT 610

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
               F SM+++ G++P+ +HY C+ID LGRAG+  EA  L+D MP + +  +W  LL + 
Sbjct: 611 GIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSC 670

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           R+Y +V + + AAE LF ++P+ S+ +VLL+NIY+S G WD+   VR  M  N++ K+PG
Sbjct: 671 RVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPG 730

Query: 639 MSWIEVKDKVYTFTVGD 655
            SWIE K+ +  F V D
Sbjct: 731 YSWIEHKNGMQAFMVDD 747



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 191/385 (49%), Gaps = 22/385 (5%)

Query: 199 TY-TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
           TY  S L+ C   +    G+ +H  +++  +  D  +   L++ YAKC ++D +R +F  
Sbjct: 6   TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV- 316
           MP++++  WN ++  + +     +A  LF  M    +    T +S + ++ A    + V 
Sbjct: 66  MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE 125

Query: 317 C-KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           C ++ H +S+K   +++ Y+ N+L+  Y KC  + DA++ F +    + V+ T+M+   A
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN--------------LSAYEQGKQV 421
                 EA +L+  M    I+ DS   SS+L  C+               LS+   G+QV
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H   IK GF SD    NSL++MYAK G++D A+  F  +P+  +VSW+ MI G  Q  + 
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 305

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            +A++   +M   G  P+ IT V++L AC  +G +   +  F+ M       P    +  
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS-----PSLSSWNT 360

Query: 542 MIDILGRAGKFQEAMELVDTMPFQA 566
           ++    +    +EA++L   M F++
Sbjct: 361 ILSGYSQNENHKEAVKLFREMQFRS 385



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 219/500 (43%), Gaps = 63/500 (12%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L+S++  C      L G+ IH + ++     D F +N L++ YAK   ++ +  +F  + 
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 159 HPDIVSWNAVI-AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK---ACAGMELKE 214
             DI +WNA++ A C   E  D A  LF +M    I  +  T  SAL    AC  +   E
Sbjct: 68  KRDIYTWNAILGAYCKASELED-AHVLFAEMPERNI-VSWNTLISALTRNGACGALVDVE 125

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            GR+ H   IK+ + ++  VG  L+ MYAKC  + +A   F  +PE N +++  ++ G  
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVL----------------KSVASFQAIGVCK 318
            +    EA  LF  M R  +  D  +LS+VL                  V S    G  +
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG--Q 243

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           QVH L++K  FESD ++ NSL+D Y K G+++ A  IF     V +V+   MI  Y Q  
Sbjct: 244 QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKS 303

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
              +A++    MQ     PD     ++L AC      E G+Q+                 
Sbjct: 304 QSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM----------------- 346

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
                             F  +    + SW+ ++ G +Q+   KEA+++F +M    V P
Sbjct: 347 ------------------FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 388

Query: 499 NHITLVSVLCACNHAG-LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           +  TL  +L +   AG ++ E      ++ +K   +      + +I +  + GK + A  
Sbjct: 389 DRTTLAIILSSL--AGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKR 446

Query: 558 LVDTMPFQANASVWGALLGA 577
           + D +  + +   W +++  
Sbjct: 447 IFDRIA-ELDIVCWNSMMAG 465


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/568 (39%), Positives = 342/568 (60%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           ++ CAG +  E GR++H  +    +     +   LVDMY KCGS+ EA+ +F  M  KN+
Sbjct: 48  IRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNV 107

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            +W ++++G +Q+G  +EA  LF  M +EG   D+  L   + S  + +A+   +++H+ 
Sbjct: 108 FSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSA 167

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           +     +SD    N++I+ YGKCG + +A  +F      ++++ ++MI A+ Q  L +EA
Sbjct: 168 AASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEA 227

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L  +  MQ   +  D     S+L+A  ++ A E GK +HV I+  G  +    GN+LVNM
Sbjct: 228 LLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNM 287

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y KCGS DDA   F  + ++ +VSW+AM+    Q+GR +EAL +F  M  +GV PN IT 
Sbjct: 288 YGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITF 347

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           V++L  C+H+G   +A  HF  M + FGI P + H+ C+ID+LGR+GK +EA EL+  MP
Sbjct: 348 VTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMP 407

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
             A+A +W +LL A   +K+ +    AAE  F  EP  ++ +++LSN+YA+   WD  AK
Sbjct: 408 VPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAK 467

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
           VR+ M+   ++K+ G SWIE+  +V+ F  GD  H     I+  L  +   +   GY P 
Sbjct: 468 VRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPD 527

Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
            +  +H +EE EK+++L++HSEKLAVAFG+ +TPP   + + KNLR+C DCH++ +FIS 
Sbjct: 528 RKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISG 587

Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +  R I VRD NRFHHF  G CSCG YW
Sbjct: 588 VEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 202/378 (53%), Gaps = 8/378 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C   K L  G ++H  +     D   F++N LV MY KCG+ ++++R+FDA+  ++
Sbjct: 47  LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN 106

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V SW  L + +V      EA+  F  M   G  P+  +L   I++C  +     GR+IH 
Sbjct: 107 VFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHS 166

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +   G DSD+ +ANA+++MY K G++ +A AVF  +   +++SW+ +IA    +E  D 
Sbjct: 167 AAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADE 226

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  F+ M+   +  +  TY S L A   +   ELG+ LH  ++   + +  +VG  LV+
Sbjct: 227 ALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVN 286

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS D+AR +F  M EKN+++WN +++ + QNG   EA +LF  M  EGV  +  T
Sbjct: 287 MYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDIT 346

Query: 301 LSTVLKSVASFQAIGVCKQV--HALSVKTAFESDDYIVN--SLIDAYGKCGHVEDAVKIF 356
             T+L   +     G  K    H + ++  F      V+   LID  G+ G +E+A ++ 
Sbjct: 347 FVTILYCCSHS---GKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELI 403

Query: 357 KESS-AVDLVACTSMITA 373
           +      D V  TS++ A
Sbjct: 404 QAMPVPADAVLWTSLLCA 421



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 204/426 (47%), Gaps = 11/426 (2%)

Query: 58  ERSVVSWNSLFSCYVHC---DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL 114
            R++  W    S  + C   D + EAV   ++   SG       L  +I  CAG+     
Sbjct: 6   RRAITKW---LSPVLECGGVDAIREAVDLLEQ---SGAAGGTGDLEQLIRRCAGAKALEE 59

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           GR+IH +      D   F +N LVDMY K G+L +A  VF  ++H ++ SW  ++AG V 
Sbjct: 60  GRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQ 119

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                 A++LF +M      P+       + +C   +    GR++H +     + SD + 
Sbjct: 120 SGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVT 179

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              +++MY KCGS+ EA  +F  MPEKN+I+W+ +I+   QN    EA   F  M +EG+
Sbjct: 180 ANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGM 239

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T  +VL +  S  A+ + K +H   V    ++   + N+L++ YGKCG  +DA  
Sbjct: 240 ELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARD 299

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F      ++V+  +M+ AY Q G   EAL L+  M    + P+     ++L  C++   
Sbjct: 300 VFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGK 359

Query: 415 YEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
           ++      V + + FG          L++M  + G +++A+     +P     V W++++
Sbjct: 360 FKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419

Query: 473 GGLAQH 478
                H
Sbjct: 420 CACVTH 425



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 6/279 (2%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L  +++  A  +A+   +++H        +   ++ N L+D YGKCG + +A ++F    
Sbjct: 44  LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQ 103

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGK 419
             ++ + T ++  + Q G G EA++L+  M Q+ E+ PD       +++C    A  QG+
Sbjct: 104 HKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGEL-PDRVALLKFIDSCGAAKALSQGR 162

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H      G  SD    N+++NMY KCGSI +A   F+ +P++ ++SWS MI    Q+ 
Sbjct: 163 EIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNE 222

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
              EAL  F  M ++G+  + IT VSVL A    G +   K  H   +    G+      
Sbjct: 223 LADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYA--GLDTSIVV 280

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
              ++++ G+ G   +A ++ D+M  + N   W A+L A
Sbjct: 281 GNTLVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAA 318



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 4/179 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A TS   L LG  +H  +V+ G D+   V N+LV MY KCG+  D+R +FD++ E++
Sbjct: 249 VLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKN 308

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN++ + Y       EA+  F  M L G+RPN+ +  +++  C+ SG        H 
Sbjct: 309 VVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSG-KFKDAVSHF 367

Query: 121 YSIK--LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCVLHE 176
             ++   G          L+DM  + G LE+A  + + +  P D V W +++  CV H+
Sbjct: 368 VEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHK 426


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 347/599 (57%), Gaps = 14/599 (2%)

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH-----CSLIKMEIKSDPI-V 234
           AL L   + ++ +  +  +    +K C        GR +H     C+          + V
Sbjct: 50  ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN--GGDMEAASLFPWMYRE 292
              LV MYAK G +D+A  +F  MP++N+++W  V++  L N  G   EA      M R+
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAA-LANAPGRKKEALRFLVEMRRD 168

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           GV  +  T S+VL +  +    GV   +HA  +K   +SD ++ +SLIDAY K G ++  
Sbjct: 169 GVAANSYTFSSVLGACGT---PGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSG 225

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F E    DLV   S+I  +AQ G G  A++L++ M++     +    +S+L AC  +
Sbjct: 226 RGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGM 285

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              E G+QVH H++K+    D    N+L++MY KCG + DAD  FS + DR ++SWS MI
Sbjct: 286 VMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMI 343

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            GLAQ+GR  EAL++F  M  +G  PN+IT+V VL AC+HAGLV +  H+F SM+K FGI
Sbjct: 344 SGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGI 403

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           QP +EH  CM+D+LGRAGK  EAM+ +  M F+ ++ +W  LLGA R++KN  +  +AA 
Sbjct: 404 QPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAAT 463

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            +  +EPE     +LLSNIYA    W N  K  + M+D  +KKEPG SWIE+   V+ F 
Sbjct: 464 EILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFI 523

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            G+ SH  S  I  +L+ +       GYVP  E  L D+   +KE LL +HSEKLA+AFG
Sbjct: 524 AGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFG 583

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + +  G  +R+ KNLRIC DCH   + +SK   + II+RD  RFHHF++G CSCG YW
Sbjct: 584 TMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 222/446 (49%), Gaps = 60/446 (13%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLE-EAVCFFKEMVL 89
           FV+NSLV MYAK G   D+  LF  +P+R+VVSW ++ +   +    + EA+ F  EM  
Sbjct: 108 FVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRR 167

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+  N ++ SS++ AC   G   +   +H   IK+G DSD+F  ++L+D Y K+G+L+ 
Sbjct: 168 DGVAANSYTFSSVLGACGTPG---VLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
              VF ++   D+V WN++IAG         A++LF +MK S    N  T TS L+AC G
Sbjct: 225 GRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG 284

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           M + E+GRQ+H  ++K +   D I+   L+DMY KCG + +A  +F  M ++++I+W+ +
Sbjct: 285 MVMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTM 342

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG  QNG  +EA  +F  M  EG   +  T+  VL + +           HA       
Sbjct: 343 ISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACS-----------HA------- 384

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV-----DLVACTSMITAYAQFGLGEEAL 384
                            G VED    F+    +     +   C  M+    + G  +EA+
Sbjct: 385 -----------------GLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAM 427

Query: 385 KLYLEMQDREINPDSFVCSSLLNAC-----ANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           K   EM+     PDS +  +LL AC     A L++Y         I+K     D  A   
Sbjct: 428 KFIGEMK---FEPDSVIWRTLLGACRMHKNATLASYAA-----TEILKLE-PEDQGARIL 478

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGI 465
           L N+YA      +A++++  + D+G+
Sbjct: 479 LSNIYADLRQWSNAEKSWKTMRDQGV 504



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 200/410 (48%), Gaps = 18/410 (4%)

Query: 80  AVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY------SIKLGYDSDMFS 133
           A+    ++  +G+R +  SL  +I  C   G    GR IH +               +F 
Sbjct: 50  ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV-LHEHNDWALKLFQQMKSSE 192
           +N+LV MYAK G L+DA+ +F  +   ++VSW  V+A           AL+   +M+   
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           +  N +T++S L AC    +      +H  +IK+ + SD  V   L+D Y K G +D  R
Sbjct: 170 VAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F  M   +L+ WN +I+G  Q+G  + A  LF  M   G   +Q TL++VL++     
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMV 286

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            + V +QVHA  +K  ++ D  + N+L+D Y KCG + DA  +F      D+++ ++MI+
Sbjct: 287 MLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMIS 344

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFM 431
             AQ G   EALK++  M+     P++     +L AC++    E G      + K FG  
Sbjct: 345 GLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQ 404

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQH 478
            +    N +V++  + G +D+A +   E+   PD   V W  ++G    H
Sbjct: 405 PEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDS--VIWRTLLGACRMH 452



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 7/272 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC +   L     +H  ++  G DSD FV +SL+  Y K G+    R +FD +    
Sbjct: 180 VLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCD 236

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V WNS+ + +        A+  F  M  SG   N+ +L+S++ AC G     +GR++H 
Sbjct: 237 LVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHA 296

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + +K  YD D+   NAL+DMY K G L DA A+F  +   D++SW+ +I+G   +  +  
Sbjct: 297 HVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVE 354

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLV 239
           ALK+F  MK+    PN  T    L AC+   L E G     S+ K+  I+ +      +V
Sbjct: 355 ALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMV 414

Query: 240 DMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVI 270
           D+  + G +DEA + I  +  E + + W  ++
Sbjct: 415 DLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 4/179 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ACT    L +G QVH  V+   +D D  + N+L+ MY KCG  +D+  LF  + +R 
Sbjct: 278 VLRACTGMVMLEVGRQVHAHVL--KYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRD 335

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW+++ S         EA+  F  M   G  PN  ++  ++ AC+ +G    G     
Sbjct: 336 VISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFR 395

Query: 121 YSIKL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
              KL G   +    N +VD+  + G L++A+    +++  PD V W  ++  C +H++
Sbjct: 396 SMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKN 454


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/633 (36%), Positives = 376/633 (59%), Gaps = 5/633 (0%)

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIA--GCVLHEHNDWALKLFQ--QMKSSEINPNMF 198
           KV   E  VAV  D +     S    I     VL      A++LF+  +++    +    
Sbjct: 59  KVEYRERKVAVLDDTQIRKTSSSGLCIQIEKLVLCNRYREAMELFEILELEHDGFDVGGS 118

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           TY + + AC G+      +++   ++    + D  V   ++ ++ KCG M +AR +F  M
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           PEK++ +W  +I G + +G   EA  LF  M+ E       T +T++++ A    + V +
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q+H+ ++K     D ++  +LID Y KCG +EDA  +F +      V   S+I +YA  G
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             EEAL  Y EM+D     D F  S ++  CA L++ E  KQ H  +++ G+ +D  A  
Sbjct: 299 YSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANT 358

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LV+ Y+K G ++DA   F+ +  + ++SW+A+I G   HG+G+EA++MF QML +G++P
Sbjct: 359 ALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIP 418

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           NH+T ++VL AC+++GL       F SM +   ++P   HYACM+++LGR G   EA EL
Sbjct: 419 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYEL 478

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           + + PF+   ++W  LL A R+++N+E+G+ AAE L+ +EPEK   +++L N+Y S+G  
Sbjct: 479 IRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKL 538

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
              A V + +K   L+  P  +WIEVK + Y F  GD+SH+++KEIY K++ +   +++ 
Sbjct: 539 KEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRH 598

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GYV   +  L DV+E E++++L +HSEKLA+AFGLI TP    +++ +  R+C DCH++ 
Sbjct: 599 GYVEENKALLPDVDE-EEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAI 657

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           +FI+ +  REI+VRD +RFHHFR+GSCSCG YW
Sbjct: 658 KFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 231/507 (45%), Gaps = 52/507 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   + +    +V   +V +GF+ D +V N ++ ++ KCG  +D+R+LFD +PE+ 
Sbjct: 123 LVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKD 182

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           + SW ++   +V      EA   F  M          + ++MI A AG G   +GR+IH 
Sbjct: 183 MASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHS 242

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G   D F + AL+DMY+K G++EDA  VF  +     V WN++IA   LH +++ 
Sbjct: 243 CALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEE 302

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL  + +M+ S    + FT +  ++ CA +   E  +Q H +L++    +D +    LVD
Sbjct: 303 ALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVD 362

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y+K G M++A  +F+ M  KN+I+WN +I+G+  +G   EA  +F  M REG+  +  T
Sbjct: 363 FYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVT 422

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL S  S+  +                                   E   +IF   S
Sbjct: 423 FLAVL-SACSYSGLS----------------------------------ERGWEIFYSMS 447

Query: 361 AVDLVACTSMITAYAQFGLGEEAL--KLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               V   +M  A     LG E L  + Y  ++     P + + ++LL AC      E G
Sbjct: 448 RDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELG 507

Query: 419 KQVHVHIIKFGFMSDTFAGN-SLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW---- 468
           K    ++  +G   +       L+N+Y   G + +A      +  +G+      +W    
Sbjct: 508 KLAAENL--YGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVK 565

Query: 469 ---SAMIGGLAQHGRGKEALQMFGQML 492
               A + G   H + KE  +    M+
Sbjct: 566 KQSYAFLCGDKSHSQTKEIYEKVNNMM 592



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 233/470 (49%), Gaps = 21/470 (4%)

Query: 72  VHCDFLEEAVCFFK--EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
           V C+   EA+  F+  E+   G      +  ++++AC G       +++  Y +  G++ 
Sbjct: 91  VLCNRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEP 150

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D++  N ++ ++ K G + DA  +F ++   D+ SW  +I G V   +   A  LF  M 
Sbjct: 151 DLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMW 210

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
               +    T+T+ ++A AG+ L ++GRQ+H   +K  +  D  V   L+DMY+KCGS++
Sbjct: 211 EEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIE 270

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +A  +F  MPEK  + WN +I+ +  +G   EA S +  M   G   D  T+S V++  A
Sbjct: 271 DAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICA 330

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              ++   KQ HA  V+  +++D     +L+D Y K G +EDA  +F      ++++  +
Sbjct: 331 RLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNA 390

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV-----H 424
           +I  Y   G GEEA++++ +M    + P+     ++L+AC+     E+G ++       H
Sbjct: 391 LIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 450

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR--- 480
            +K   M        +V +  + G +D+A       P +   + W+ ++     H     
Sbjct: 451 KVKPRAMHYA----CMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLEL 506

Query: 481 GKEALQ-MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           GK A + ++G  +E   L N+I L+++    N +G + EA    +++++K
Sbjct: 507 GKLAAENLYG--MEPEKLCNYIVLLNLY---NSSGKLKEAAGVLQTLKRK 551


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/532 (42%), Positives = 343/532 (64%), Gaps = 15/532 (2%)

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +AR  F  +P+ N +    + SG+++N     +  LF    R  +  D  ++     ++ 
Sbjct: 2   DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELF----RAMIASDSASVVDEAAALV 57

Query: 310 SFQAI------GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH--VEDAVKIFKESSA 361
           +F A       GV   +HAL  K  FE +  +VN+++D+Y K G   +E A K+F ++  
Sbjct: 58  AFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVF-DTME 116

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQD--REINPDSFVCSSLLNACANLSAYEQGK 419
            D+V+  SMI  YAQ G+  EA+ LY +M +    I  ++   S++L ACA+  A + GK
Sbjct: 117 RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGK 176

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H  +++ G   + + G S+V+MY+KCG ++ A RAF +I ++ I+SWSAMI G   HG
Sbjct: 177 HIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHG 236

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
           RG+EAL++F +M   G+ PN+IT +SVL AC+HAGL+ E ++ + +M+++FGI+   EHY
Sbjct: 237 RGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHY 296

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
            CM+D+LGRAG   EA  L+  M  + +A++WGALL A RI+KNVE+ + + + LF ++ 
Sbjct: 297 GCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDA 356

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
             S  +VLLSNIYA AGMW +V ++R  +K  +++K PG S  E+K K+Y F VGD+SH 
Sbjct: 357 SNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHP 416

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           +  EIY+ L+++ + + +AGYVP   + LHD++E EKE  L  HSEKLAVAF L+ + P 
Sbjct: 417 QHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPR 476

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + I + KNLR+C DCHT+ +FI+KI  REII+RD+ RFHHF++G CSC  YW
Sbjct: 477 SVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 147/265 (55%), Gaps = 13/265 (4%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCG--NFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           +H ++   GF+ +  V N+++  YAK G  +   +R++FD + ER VVSWNS+ + Y   
Sbjct: 74  LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQN 132

Query: 75  DFLEEAVCFFKEM--VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
               EA+  + +M  V  GI+ N  +LS+++ ACA +G    G+ IH   +++G + +++
Sbjct: 133 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVY 192

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
              ++VDMY+K G +E A   F+ I+  +I+SW+A+I G  +H     AL++F +MK S 
Sbjct: 193 VGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSG 252

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG----LVDMYAKCGSM 248
           + PN  T+ S L AC+   L + GR  + ++ K E   +   GV     +VD+  + G +
Sbjct: 253 LRPNYITFISVLAACSHAGLLDEGRYWYNAM-KQEFGIE--AGVEHYGCMVDLLGRAGCL 309

Query: 249 DEARMIFHLMPEKNLIA-WNIVISG 272
           DEA  +   M  K   A W  ++S 
Sbjct: 310 DEAYSLIKEMKVKPDAAIWGALLSA 334



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 216/476 (45%), Gaps = 66/476 (13%)

Query: 47  IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP--NEFSLSSMIN 104
           +D+RR FD IP+ + V   ++ S YV  + +  ++  F+ M+ S      +E +     +
Sbjct: 1   MDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFS 60

Query: 105 ACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG--NLEDAVAVFKDIEHPDI 162
           A A   D  +   +H    K+G++ +    N ++D YAK G  +LE A  VF  +E  D+
Sbjct: 61  ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMER-DV 119

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKS--SEINPNMFTYTSALKACAGMELKELGRQLH 220
           VSWN++IA    +  +  A+ L+ +M +    I  N    ++ L ACA     + G+ +H
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIH 179

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             +++M ++ +  VG  +VDMY+KCG ++ A   F  + EKN+++W+ +I+G+  +G   
Sbjct: 180 NQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQ 239

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA  +F  M R G+  +  T  +VL                A S     +   Y  N++ 
Sbjct: 240 EALEIFTEMKRSGLRPNYITFISVLA---------------ACSHAGLLDEGRYWYNAMK 284

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             +G    +E  V+ +          C  M+    + G  +EA  L  EM+   + PD+ 
Sbjct: 285 QEFG----IEAGVEHY---------GC--MVDLLGRAGCLDEAYSLIKEMK---VKPDAA 326

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-----LVNMYAKCGSIDDADR 455
           +  +LL+AC         K V +  +    + +  A NS     L N+YA+ G   D +R
Sbjct: 327 IWGALLSAC------RIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVER 380

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM----LEDGVLPNHITLVSVL 507
               +  R I           +   G  + ++ G++    + D   P HI + S L
Sbjct: 381 IRLLVKTRRI-----------EKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYL 425



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 11/217 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     +  G  +H  VV  G + + +V  S+V MY+KCG    + R F  I E++
Sbjct: 162 VLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN 221

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ + Y      +EA+  F EM  SG+RPN  +  S++ AC+ +G  LL    + 
Sbjct: 222 ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG--LLDEGRYW 279

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           Y+    + G ++ +     +VD+  + G L++A ++ K+++  PD   W A+++ C +H+
Sbjct: 280 YNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHK 339

Query: 177 HNDWA---LKLFQQMKSSEINPNMFTYTSALKACAGM 210
           + + A   +K   ++ +S  N   +   S + A AGM
Sbjct: 340 NVELAEMSVKRLFELDAS--NSGYYVLLSNIYAEAGM 374


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/671 (35%), Positives = 403/671 (60%), Gaps = 3/671 (0%)

Query: 14   GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
            G Q+H   V  G D++ FV +SL+ +Y K G   D++++FD   E+++V WN++   +V 
Sbjct: 343  GRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQ 402

Query: 74   CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
             +  EE +  F+ M  + +  ++F+  S++ AC       LGR++H  +IK G D+D+F 
Sbjct: 403  NELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFV 462

Query: 134  ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            ANA++DMY+K+G ++ A A+F  I   D VSWNA+I G   +E    A+ + ++MK   I
Sbjct: 463  ANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGI 522

Query: 194  NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
              +  ++ +A+ AC+ +   E G+Q+H + IK  + S+  VG  L+D+Y+K G ++ +R 
Sbjct: 523  ALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRK 582

Query: 254  IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
            +   +   +++  N +I+G +QN  + EA  LF  + ++G      T +++L       +
Sbjct: 583  VLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVS 642

Query: 314  IGVCKQVHALSVKTAFESDDYIVN-SLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMI 371
              + KQVH  ++K+A  + D  +  SL+  Y KC  +EDA K+ +E     +LV  T+ I
Sbjct: 643  SVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATI 702

Query: 372  TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            + YAQ G   ++L ++  M+  ++  D    +S+L AC+ ++A   GK++H  I+K GF+
Sbjct: 703  SGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFV 762

Query: 432  SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            S   A ++L++MY+KCG +  +   F E+ +R  I+ W++MI G A++G   EAL +F +
Sbjct: 763  SYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQK 822

Query: 491  MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
            M E  + P+ +TL+ VL AC+HAGL++E  H F+SM + +GI P  +HYAC+ID+LGR G
Sbjct: 823  MQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGG 882

Query: 551  KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
              Q+A E++D +PF+A+  +W   L A +++K+ E G+ AA+ L  +EP+ SST+V LS+
Sbjct: 883  HLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSS 942

Query: 611  IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
            ++A+AG W      R  M++  + K PG SWI V +K   F V D  H  +  IY  LD+
Sbjct: 943  LHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDD 1002

Query: 671  VSDLLNKAGYV 681
            ++ ++NK G +
Sbjct: 1003 LTGMMNKDGRI 1013



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/549 (29%), Positives = 291/549 (53%), Gaps = 3/549 (0%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           D+    +++   A  G   D+R L   I   S V+WN++ + Y       E    +K+M 
Sbjct: 257 DQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMK 316

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G+ P   + +S+++A A       GR+IH  ++K G D+++F  ++L+++Y K G + 
Sbjct: 317 KQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCIS 376

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA  VF      +IV WNA++ G V +E  +  +++FQ M+ +++  + FT+ S L AC 
Sbjct: 377 DAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACI 436

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   +LGRQ+HC  IK  + +D  V   ++DMY+K G++D A+ +F L+P K+ ++WN 
Sbjct: 437 NLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNA 496

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I G   N  + EA ++   M   G+  D+ + +T + + ++  AI   KQ+H+ S+K  
Sbjct: 497 LIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYN 556

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S+  + +SLID Y K G VE + K+     A  +V   ++IT   Q    +EA++L+ 
Sbjct: 557 VCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQ 616

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKC 447
           ++      P +F  +S+L+ C    +   GKQVH + +K   ++ DT  G SLV +Y KC
Sbjct: 617 QVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKC 676

Query: 448 GSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
             ++DA++   E+PD + +V W+A I G AQ+G   ++L MF +M    V  +  T  SV
Sbjct: 677 KLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSV 736

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC+    + + K     +  K G    +   + ++D+  + G    + E+   +  + 
Sbjct: 737 LKACSEMAALTDGK-EIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQ 795

Query: 567 NASVWGALL 575
           N   W +++
Sbjct: 796 NIMPWNSMI 804



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 249/494 (50%), Gaps = 37/494 (7%)

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
           + SC+       + +  F+ +  S G  P++F ++ +++AC+  G    GR++H   +K 
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           G+ S +F    LVDMYAK G ++DA  +F  I  PD + W ++IAG         AL LF
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALF 246

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKC 245
            +M+                                   KM    D +  V ++   A  
Sbjct: 247 SRME-----------------------------------KMGSVPDQVTCVTIISTLASM 271

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G + +AR +   +   + +AWN VI+ + Q+G D E   L+  M ++G+   ++T +++L
Sbjct: 272 GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASIL 331

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            + A+  A    +Q+HA +VK   +++ ++ +SLI+ Y K G + DA K+F  S+  ++V
Sbjct: 332 SAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 391

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
              +++  + Q  L EE ++++  M+  ++  D F   S+L AC NL + + G+QVH   
Sbjct: 392 MWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCIT 451

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
           IK G  +D F  N++++MY+K G+ID A   FS IP +  VSW+A+I GLA +    EA+
Sbjct: 452 IKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAI 511

Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
            M  +M   G+  + ++  + + AC++   +   K    S   K+ +       + +ID+
Sbjct: 512 NMLKRMKFYGIALDEVSFATAINACSNIWAIETGK-QIHSASIKYNVCSNHAVGSSLIDL 570

Query: 546 LGRAGKFQEAMELV 559
             + G  + + +++
Sbjct: 571 YSKFGDVESSRKVL 584



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 3/207 (1%)

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAY 374
           C  +HA  ++        + ++L+D YG+ G V  A +       +     A +S+++ +
Sbjct: 72  CGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCH 131

Query: 375 AQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           A+ G   + L  +  ++      PD F  + +L+AC+ L A E G+QVH  ++K GF S 
Sbjct: 132 ARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSS 191

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F    LV+MYAKCG +DDA R F  I     + W++MI G  + GR ++AL +F +M +
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAK 520
            G +P+ +T V+++      G + +A+
Sbjct: 252 MGSVPDQVTCVTIISTLASMGRLGDAR 278


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/639 (35%), Positives = 371/639 (58%), Gaps = 43/639 (6%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+     + +L+ A+++F+  +HP++  +NA+I G   +   + ++  F  M    I P+
Sbjct: 78  LISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPD 137

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T    LK+ A +    LGR LH  ++K+ ++ D  V V LVDMY K G +     +F 
Sbjct: 138 RLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFD 197

Query: 257 LMPEKN----LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
             P++N    ++ WN++I+G  + G   +AASLF  M     G                 
Sbjct: 198 ESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAG----------------- 240

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
                                   NSLI+ + + G ++ A ++F +    ++V+ T+MI 
Sbjct: 241 ----------------------SWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMIN 278

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            ++Q G  E+AL ++  M +  + P+     S L AC  + A + G+++H ++   GF  
Sbjct: 279 GFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQL 338

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +   G +LV+MYAKCG+I  A R F E   + +++WS MI G A HG   +ALQ F +M 
Sbjct: 339 NRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMK 398

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
             G+ P+ +  +++L AC+H+G V +  + FESM   + I+P  +HY  ++D+LGRAG+ 
Sbjct: 399 SAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRL 458

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            EA+  + +MP   +  +WGAL  A R +KN+E+ +  AE L  +EP+   ++V LSN+Y
Sbjct: 459 DEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVY 518

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A+ G W++V +VR  MK+  ++K+PG S+IEV+ +V++F  GD +H R++EI  KL+E++
Sbjct: 519 AAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEIT 578

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
               + GY+P     LH++EE EKE  L  HSEKLA+AFGLI+T PG+TIR+ KNLR+C 
Sbjct: 579 ASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCG 638

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH+  ++ SK+  REII+RD+ RFHHF++G+CSCG YW
Sbjct: 639 DCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 127/236 (53%), Gaps = 4/236 (1%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           NSL+  + + G+   +R LF  +PE++VVSW ++ + +      E+A+  F  M+  G+R
Sbjct: 243 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 302

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           PN+ ++ S + AC   G   +G +IH Y    G+  +     ALVDMYAK GN++ A  V
Sbjct: 303 PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRV 362

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F + +  D+++W+ +I G  +H   D AL+ F +MKS+ INP+   + + L AC+     
Sbjct: 363 FVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNV 422

Query: 214 ELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAW 266
           + G     S+ +++   +P +     +VD+  + G +DEA      MP   + + W
Sbjct: 423 DQGLNFFESM-RLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIW 477



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 201/483 (41%), Gaps = 105/483 (21%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VLK+  +  D+ LG  +HG V+  G + D FV  SLV MY K G      +LFD  P+R 
Sbjct: 144 VLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRN 203

Query: 60  ---SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
              S++ WN L +       L +A   F+ M                             
Sbjct: 204 KAESILLWNVLINGCCKVGDLSKAASLFEAMP---------------------------- 235

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
                      + +  S N+L++ + + G+L+ A  +F  +   ++VSW  +I G   + 
Sbjct: 236 -----------ERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNG 284

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
            ++ AL +F +M    + PN  T  SAL AC  +   ++G ++H  L     + +  +G 
Sbjct: 285 DHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGT 344

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMYAKCG++  A  +F     K+L+ W+++I G   +G                  F
Sbjct: 345 ALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHG-----------------CF 387

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           DQ      L+     ++ G+               D+ I  +++ A    G+V+  +  F
Sbjct: 388 DQA-----LQCFVKMKSAGI-------------NPDEVIFLAILTACSHSGNVDQGLNFF 429

Query: 357 KESSAVD------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC- 409
            ES  +D      +   T ++    + G  +EAL     +Q   INPD  +  +L  AC 
Sbjct: 430 -ESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSF---IQSMPINPDFVIWGALFCACR 485

Query: 410 -------ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
                  A L+A +  +    H   + F+S         N+YA  G  +D +R  + + +
Sbjct: 486 AHKNIEMAELTAEKLLQLEPKHPGSYVFLS---------NVYAAVGRWEDVERVRTLMKN 536

Query: 463 RGI 465
           RG+
Sbjct: 537 RGV 539



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 41/221 (18%)

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           Q  Q+H  I      S++     L++      S+D A   F       +  ++A+I GLA
Sbjct: 55  QLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLA 114

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA-----------CNHAGLVAEAKHHFES 525
           ++ R + ++  F  ML   + P+ +TL  VL +           C H G V +    F+S
Sbjct: 115 ENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGG-VMKLGLEFDS 173

Query: 526 M-------------EKKFGIQPMQEH-----------YACMIDILGRAGKFQEAMELVDT 561
                         E  FG+Q   E            +  +I+   + G   +A  L + 
Sbjct: 174 FVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEA 233

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           MP + NA  W +L+      +N ++ +  A  LF   PEK+
Sbjct: 234 MP-ERNAGSWNSLING--FVRNGDLDR--ARELFVQMPEKN 269


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/554 (39%), Positives = 344/554 (62%), Gaps = 1/554 (0%)

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H  +IK    SD  +G  LV MY K G  ++A+ +F  MP ++L++WN ++SG    G 
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 279 DMEAASLFPWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
                + F  M  E G   ++ TL +V+ + A   A+   K +H + VK        +VN
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           SLI+ YGK G ++ A ++F+E     LV+  SM+  +   G  E+ + L+  M+   INP
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAF 457
           D     +LL AC +     Q + +H +I + GF +D     +L+N+YAK G ++ ++  F
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400

Query: 458 SEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA 517
            EI DR  ++W+AM+ G A H  G+EA+++F  M+++GV  +H+T   +L AC+H+GLV 
Sbjct: 401 EEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 460

Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           E K +FE M + + ++P  +HY+CM+D+LGR+G+ ++A EL+ +MP + ++ VWGALLGA
Sbjct: 461 EGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 520

Query: 578 ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEP 637
            R+Y NVE+G+  AE L +++P     +++LSNIY++AG+W   +KVR  MK+ +L + P
Sbjct: 521 CRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNP 580

Query: 638 GMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKE 697
           G S+IE  +K++ F VGD+ H RS EI+ KL+E+   + +AG  P  E  LHD++E  K 
Sbjct: 581 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKV 640

Query: 698 QLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            ++  HSEKLA+AFGL+ T  G  + + KNLRIC DCH++ +F S +  R II+RD  RF
Sbjct: 641 DMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRF 700

Query: 758 HHFRNGSCSCGGYW 771
           HHF +G CSC  YW
Sbjct: 701 HHFADGLCSCRDYW 714



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 198/385 (51%), Gaps = 16/385 (4%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  V+ +   SD F+ + LV MY K G   D++RLFD +P R +VSWNSL S      +
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 77  LEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           L   +  F  M   SG +PNE +L S+++ACA  G    G+ +HG  +KLG        N
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKSSE 192
           +L++MY K+G L+ A  +F+++    +VSWN+++   V+H HN +A K   LF  MK + 
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV---VIHNHNGYAEKGMDLFNLMKRAG 337

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           INP+  T  + L+AC    L      +H  + +    +D I+   L+++YAK G ++ + 
Sbjct: 338 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 397

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            IF  + +++ IAW  +++G+  +    EA  LF  M +EGV  D  T + +L + +   
Sbjct: 398 DIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 457

Query: 313 AIGVCK---QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLV 365
            +   K   ++ +   +     D Y  + ++D  G+ G +EDA ++ K    E S+    
Sbjct: 458 LVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWG 515

Query: 366 ACTSMITAYAQFGLGEEALKLYLEM 390
           A       Y    LG+E  +  L +
Sbjct: 516 ALLGACRVYGNVELGKEVAEQLLSL 540



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 188/385 (48%), Gaps = 22/385 (5%)

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH   IK    SD F  + LV MY K+G  EDA  +F ++ + D+VSWN++++G     +
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 178 NDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               L  F +M++ S   PN  T  S + ACA M   + G+ LH  ++K+ +     V  
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L++MY K G +D A  +F  MP ++L++WN ++  H  NG   +   LF  M R G+  
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           DQ T+  +L++          + +HA   +  F +D  I  +L++ Y K G +  +  IF
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +E    D +A T+M+  YA    G EA+KL+  M    +  D    + LL+AC++    E
Sbjct: 401 EEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 460

Query: 417 QGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEI---PDRGIV 466
           +GK+       F  MS+ +         + +V++  + G ++DA      +   P  G+ 
Sbjct: 461 EGKKY------FEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGV- 513

Query: 467 SWSAMIGGLAQHGR---GKEALQMF 488
            W A++G    +G    GKE  +  
Sbjct: 514 -WGALLGACRVYGNVELGKEVAEQL 537



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 141/262 (53%), Gaps = 5/262 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC     L  G  +HG+VV  G      V NSL+ MY K G    + +LF+ +P RS
Sbjct: 247 VVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS 306

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+   + H  + E+ +  F  M  +GI P++ ++ +++ AC  +G       IH 
Sbjct: 307 LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHA 366

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  + G+++D+  A AL+++YAK+G L  +  +F++I+  D ++W A++AG  +H     
Sbjct: 367 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGRE 426

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR---QLHCSLIKMEIKSDPIVGVG 237
           A+KLF  M    +  +  T+T  L AC+   L E G+   ++   + ++E + D      
Sbjct: 427 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SC 484

Query: 238 LVDMYAKCGSMDEARMIFHLMP 259
           +VD+  + G +++A  +   MP
Sbjct: 485 MVDLLGRSGRLEDAYELIKSMP 506



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 122/223 (54%), Gaps = 1/223 (0%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           + + +++ +++S  ++  C  +HA  +K+   SD +I + L+  Y K G+ EDA ++F E
Sbjct: 140 SIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDE 199

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQ 417
               DLV+  S+++  +  G     L  +  M+      P+     S+++ACA + A ++
Sbjct: 200 MPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           GK +H  ++K G        NSL+NMY K G +D A + F E+P R +VSW++M+     
Sbjct: 260 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 319

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           +G  ++ + +F  M   G+ P+  T+V++L AC   GL  +A+
Sbjct: 320 NGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 362



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 4/188 (2%)

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           ++ +  +  DS V  SL+ A ++ ++      +H  +IK    SD F G+ LV+MY K G
Sbjct: 130 KLHNSSLLADSIV-QSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG 188

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVL 507
             +DA R F E+P+R +VSW++++ GL+  G     L  F +M  E G  PN +TL+SV+
Sbjct: 189 YDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC   G + E K     +  K G+    +    +I++ G+ G    A +L + MP ++ 
Sbjct: 249 SACAXMGALDEGK-SLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSL 307

Query: 568 ASVWGALL 575
            S W +++
Sbjct: 308 VS-WNSMV 314


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/679 (36%), Positives = 376/679 (55%), Gaps = 69/679 (10%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA-------- 150
            + ++++C  S   +  R+IH   IK  + S++F  N LVD Y K G  EDA        
Sbjct: 22  FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81

Query: 151 -----------------------VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
                                    VFK +  PD  SWNA+++G   H+  + AL+ F  
Sbjct: 82  QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M S +   N +++ SAL ACAG+    +G Q+H  + K     D  +G  LVDMY+KCG 
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +  A+  F  M  +N+++WN +I+ + QNG   +A  +F  M   GV  D+ TL++V+ +
Sbjct: 202 VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSA 261

Query: 308 VASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            AS+ AI    Q+HA  VK   + +D  + N+L+D Y KC  V +A  +F      ++V+
Sbjct: 262 CASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVS 321

Query: 367 CTSMITAYA-------------------------------QFGLGEEALKLYLEMQDREI 395
            TSM+  YA                               Q G  EEA++L+L ++   I
Sbjct: 322 ETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM------SDTFAGNSLVNMYAKCGS 449
            P  +   +LLNACANL+  + G+Q H  I+K GF       SD F GNSL++MY KCG 
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGM 441

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++D    F  + +R +VSW+AMI G AQ+G G  AL++F +ML  G  P+H+T++ VL A
Sbjct: 442 VEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSA 501

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+HAGLV E + +F SM  + G+ PM++H+ CM+D+LGRAG   EA +L+ TMP Q +  
Sbjct: 502 CSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNV 561

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWG+LL A +++ N+E+G++ AE L  I+P  S  +VLLSN+YA  G W +V +VR+ M+
Sbjct: 562 VWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMR 621

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              + K+PG SWIE++ +V+ F V D+ H   K+I+  L  +++ +  AGYVP  + D  
Sbjct: 622 QRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEADDDEI 681

Query: 690 DVEESEKEQLLYHHSEKLA 708
             EES+ E +L+   E  A
Sbjct: 682 CEEESDSELVLHFEMETEA 700



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/552 (30%), Positives = 264/552 (47%), Gaps = 75/552 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L +C   K      ++H  ++ T F S+ F+ N LV  Y KCG F D+R++FD +P+R+
Sbjct: 25  LLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRN 84

Query: 61  VVS-------------------------------WNSLFSCYVHCDFLEEAVCFFKEMVL 89
             S                               WN++ S +   D  EEA+ FF +M  
Sbjct: 85  TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
                NE+S  S ++ACAG  D  +G +IH    K  Y  D++  +ALVDMY+K G +  
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVAC 204

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A   F  +   +IVSWN++I     +     AL++F  M  + + P+  T  S + ACA 
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264

Query: 210 MELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP--------- 259
                 G Q+H  ++K +  ++D ++G  LVDMYAKC  ++EAR++F  MP         
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324

Query: 260 ----------------------EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
                                 EKN+++WN +I+G+ QNG + EA  LF  + RE +   
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAF------ESDDYIVNSLIDAYGKCGHVED 351
             T   +L + A+   + + +Q H   +K  F      ESD ++ NSLID Y KCG VED
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVED 444

Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
              +F+     D+V+  +MI  YAQ G G  AL+++ +M      PD      +L+AC++
Sbjct: 445 GCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSH 504

Query: 412 LSAYEQGKQ-VHVHIIKFGF--MSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVS 467
               E+G++  H    + G   M D F    +V++  + G +D+A+     +P     V 
Sbjct: 505 AGLVEEGRRYFHSMRTELGLAPMKDHF--TCMVDLLGRAGCLDEANDLIQTMPMQPDNVV 562

Query: 468 WSAMIGGLAQHG 479
           W +++     HG
Sbjct: 563 WGSLLAACKVHG 574



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 44/374 (11%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK- 354
            D +  + +L S    ++    +++HA  +KT F S+ +I N L+DAYGKCG+ EDA K 
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 355 ------------------------------IFKESSAVDLVACTSMITAYAQFGLGEEAL 384
                                         +FK     D  +  +M++ +AQ    EEAL
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
           + +++M   +   + +   S L+ACA L+    G Q+H  I K  ++ D + G++LV+MY
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           +KCG +  A RAF  +  R IVSW+++I    Q+G   +AL++F  M+++GV P+ ITL 
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256

Query: 505 SVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
           SV+ AC     + E       + K+   +        ++D+  +  +  EA  + D MP 
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316

Query: 565 QANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS--STHVLLSNIYASAGMWDNVA 622
           +   S    + G AR          AA ++F+   EK+  S + L++  Y   G  +N  
Sbjct: 317 RNVVSETSMVCGYAR-----AASVKAARLMFSNMMEKNVVSWNALIAG-YTQNG--ENEE 368

Query: 623 KVRRFMKDNKLKKE 636
            VR F+    LK+E
Sbjct: 369 AVRLFL---LLKRE 379



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 24/251 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF------DSDEFVANSLVVMYAKCGNFIDSRRLFD 54
           +L AC +  DL LG Q H  ++  GF      +SD FV NSL+ MY KCG   D   +F+
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450

Query: 55  AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL 114
            + ER VVSWN++   Y    +   A+  F++M++SG +P+  ++  +++AC+ +G    
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEE 510

Query: 115 GRK-IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
           GR+  H    +LG          +VD+  + G L++A  + + +   PD V W +++A C
Sbjct: 511 GRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAAC 570

Query: 173 VLHEHNDWALKLFQQMKSSEINP----------NMFT----YTSALKACAGMELKELGRQ 218
            +  H +  L  +   K  EI+P          NM+     +   ++    M  + + +Q
Sbjct: 571 KV--HGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQ 628

Query: 219 LHCSLIKMEIK 229
             CS I+++ +
Sbjct: 629 PGCSWIEIQSR 639


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/653 (36%), Positives = 379/653 (58%), Gaps = 29/653 (4%)

Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           D D FS   ++ +YA+ G+L +A  VF  +    + SW A+++   L  H++ A  LF  
Sbjct: 20  DRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDT 79

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M+      ++  +T  L   A     E  +  H   +    + D +    ++   A+ G 
Sbjct: 80  MQER----DLIAWTIMLTVLATFSNIEDAK-YHFDQMP---ERDLVAWTAMLAANAERGQ 131

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           M+ AR  F  MPE+NL +W  ++S + ++G D++AA         G  FD      ++  
Sbjct: 132 MENARETFDQMPERNLFSWTSLLSAYGRSG-DVKAA---------GRVFDSMPEWNLVAW 181

Query: 308 VASFQAIGVCKQVHALSVKTAFES----DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
            A      +   V  +  K AF+S    D     +++ AY   GH+    +IF+     D
Sbjct: 182 TAMLTGYSLSGDV--VRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERD 239

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQ-----DREINPDSFVCSSLLNACANLSAYEQG 418
           L++  +M+ A  +  L EE+ +L+  M       + + P+     +LL+AC+ L A  +G
Sbjct: 240 LISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEG 299

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           +++H  + + GF +D    N+LVN Y +CG++ DA   F  +  R ++SWS+MI   AQ 
Sbjct: 300 RKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQR 359

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           GR  EA++++ +ML +G LP+ I  +SVL AC+++G+V  +   F S+     ++P  EH
Sbjct: 360 GRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEH 419

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YACM+D+LGRAGK ++A +L+  MPF     ++  +L A ++Y +VE G+ AAE++F ++
Sbjct: 420 YACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELD 479

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           PE SS ++ L+NIY++A    + A++R+ M++  +KK+PG SWIEV D+V+ F  GD+ H
Sbjct: 480 PENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMH 539

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
            +  EIYA++  +   + +AGY    +  L DVEE EKE LL++HSEKLA+AFGLI+TPP
Sbjct: 540 PQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPP 599

Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           GA +R+ KNLR+C DCH + + ISK+  REI+VRD NRFHHF+NG CSC  YW
Sbjct: 600 GAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 253/581 (43%), Gaps = 82/581 (14%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS 98
           M+ + G    +R++FDAI +R   SW  + S Y     L  A   F  M     R +  S
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMP----RWSLGS 56

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDS----DMFSANALVDMYAKVGNLEDAVAVF 154
            +++++A A SG        H    K  +D+    D+ +   ++ + A   N+EDA   F
Sbjct: 57  WTALLSAFALSG--------HHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHF 108

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA-------- 206
             +   D+V+W A++A        + A + F QM       N+F++TS L A        
Sbjct: 109 DQMPERDLVAWTAMLAANAERGQMENARETFDQMPER----NLFSWTSLLSAYGRSGDVK 164

Query: 207 CAGMELKEL-------------GRQLHCSLIKME------IKSDPIVGVGLVDMYAKCGS 247
            AG     +             G  L   +++ +       + D I    ++  YA  G 
Sbjct: 165 AAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGH 224

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-----EGVGFDQTTLS 302
           +   R IF  MPE++LI+W  +++  ++N    E+  LF  M R     +G+  ++ T  
Sbjct: 225 LRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFI 284

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
           T+L + +   A+   +++HA   +  F++D  + N+L++ YG+CG + DA  +F      
Sbjct: 285 TLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRR 344

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           D+++ +SMI+A+AQ G  +EA++LY  M      PD  +  S+L AC+N    E      
Sbjct: 345 DVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFF 404

Query: 423 VHIIKFGFMSDTFAGNS-LVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG- 479
             I+    +  T    + +V++  + G + DA+     +P   G + +  M+     +  
Sbjct: 405 RSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTD 464

Query: 480 --RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES--MEKKFG---- 531
             RG+ A ++  ++  +   P +ITL ++  A       A  +   E   ++KK G    
Sbjct: 465 VERGEAAAEVVFELDPENSSP-YITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWI 523

Query: 532 --------------IQPMQEHYACMIDILGR----AGKFQE 554
                         + P ++     I  LGR    AG FQ+
Sbjct: 524 EVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQD 564



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 14/262 (5%)

Query: 11  LFLGLQVHGIVVFT--GFDS----DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           +  G  + G VV     FDS    D     +++  YA  G+   +R +F  +PER ++SW
Sbjct: 184 MLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISW 243

Query: 65  NSLFSCYVHCDFLEEAVCFFKEM-----VLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            ++ +  V  D LEE+   F  M     +  G+ PN  +  ++++AC+  G    GRKIH
Sbjct: 244 ATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIH 303

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               + G+D+D+  +NALV+ Y + G L DA  VF  +   D++SW+++I+        D
Sbjct: 304 AAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVD 363

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VG 237
            A++L+ +M S    P+   + S L AC+   + E       S++  + + +P +     
Sbjct: 364 EAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG-DTQVEPTLEHYAC 422

Query: 238 LVDMYAKCGSMDEARMIFHLMP 259
           +VD+  + G + +A  +  LMP
Sbjct: 423 MVDVLGRAGKLRDAEDLLRLMP 444



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 20/243 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC+    L  G ++H  V   GFD+D  V+N+LV  Y +CG   D++ +FD +  R 
Sbjct: 286 LLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRD 345

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG----DSLLGR 116
           V+SW+S+ S +     ++EA+  +  M+  G  P++    S++ AC+ SG         R
Sbjct: 346 VISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFR 405

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
            I G +     +  +     +VD+  + G L DA  + + +  HP  + +  +++ C L+
Sbjct: 406 SIVGDT---QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLY 462

Query: 176 ---EHNDWALKLFQQMKSSEINP-----NMFTYTSALKACAG----MELKELGRQLHCSL 223
              E  + A ++  ++     +P     N+++     K  A     ME + + ++  CS 
Sbjct: 463 TDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSW 522

Query: 224 IKM 226
           I++
Sbjct: 523 IEV 525


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/675 (35%), Positives = 385/675 (57%), Gaps = 6/675 (0%)

Query: 2   LKACTS--KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++AC+    +  ++  Q+   +V +GFD D +V   L+  Y K GN   +R +FDA+PE+
Sbjct: 153 IQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           S V+W ++ S  V       ++  F +++   + P+ + LS++++AC+       G++IH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            + ++ G + D    N L+D Y K G +  A  +F  + + +I+SW  +++G   +  + 
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHK 332

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A++LF  M    + P+M+  +S L +CA +     G Q+H   IK  + +D  V   L+
Sbjct: 333 EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLI 392

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME---AASLFPWMYREGVGF 296
           DMYAKC  + +AR +F +    +++ +N +I G+ + G   E   A ++F  M    +  
Sbjct: 393 DMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRP 452

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
              T  ++L++ AS  ++G+ KQ+H L  K     D +  ++LID Y  C  ++D+  +F
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E    DLV   SM   Y Q    EEAL L+LE+Q     PD F  ++++ A  NL++ +
Sbjct: 513 DEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQ 572

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G++ H  ++K G   + +  N+L++MYAKCGS +DA +AF     R +V W+++I   A
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA 632

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG GK+ALQM  +M+ +G+ PN+IT V VL AC+HAGLV +    FE M  +FGI+P  
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPET 691

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHY CM+ +LGRAG+  +A EL++ MP +  A VW +LL       NVE+ +HAAEM   
Sbjct: 692 EHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAIL 751

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            +P+ S +  +LSNIYAS GMW    KVR  MK   + KEPG SWI +  +V+ F   D+
Sbjct: 752 SDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDK 811

Query: 657 SHARSKEIYAKLDEV 671
           SH ++ +IY  LD++
Sbjct: 812 SHCKANQIYEVLDDL 826



 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 181/589 (30%), Positives = 318/589 (53%), Gaps = 21/589 (3%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VHG ++  G + D +++N L+ +Y++ G  + +R++F+ +PER++VSW+++ S   H   
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 77  LEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGR------KIHGYSIKLGYDS 129
            EE++  F E   +    PNE+ LSS I AC+G    L GR      ++  + +K G+D 
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSG----LDGRGRWMVFQLQSFLVKSGFDR 181

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D++    L+D Y K GN++ A  VF  +     V+W  +I+GCV    +  +L+LF Q+ 
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
              + P+ +  ++ L AC+ +   E G+Q+H  +++  ++ D  +   L+D Y KCG + 
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F+ MP KN+I+W  ++SG+ QN    EA  LF  M + G+  D    S++L S A
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
           S  A+G   QVHA ++K    +D Y+ NSLID Y KC  + DA K+F   +A D+V   +
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421

Query: 370 MITAYAQFGLG---EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           MI  Y++ G      EAL ++ +M+ R I P      SLL A A+L++    KQ+H  + 
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K+G   D FAG++L+++Y+ C  + D+   F E+  + +V W++M  G  Q    +EAL 
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541

Query: 487 MFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
           +F ++      P+  T  +++ A  N A +    + H + +++     P   +   ++D+
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDM 599

Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             + G  ++A +  D+     +   W +++ +   Y N   G+ A +ML
Sbjct: 600 YAKCGSPEDAHKAFDSAA-SRDVVCWNSVISS---YANHGEGKKALQML 644



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 281/538 (52%), Gaps = 19/538 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC+    L  G Q+H  ++  G + D  + N L+  Y KCG  I + +LF+ +P ++
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW +L S Y      +EA+  F  M   G++P+ ++ SS++ +CA       G ++H 
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
           Y+IK    +D +  N+L+DMYAK   L DA  VF      D+V +NA+I G         
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
           LHE    AL +F+ M+   I P++ T+ S L+A A +    L +Q+H  + K  +  D  
Sbjct: 435 LHE----ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
            G  L+D+Y+ C  + ++R++F  M  K+L+ WN + +G++Q   + EA +LF  +    
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D+ T + ++ +  +  ++ + ++ H   +K   E + YI N+L+D Y KCG  EDA 
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F  +++ D+V   S+I++YA  G G++AL++  +M    I P+      +L+AC++  
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMI 472
             E G +    +++FG   +T     +V++  + G ++ A     ++P +   + W +++
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLL 730

Query: 473 GGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
            G A+ G     + A +M   +L D       T++S + A    G+  EAK   E M+
Sbjct: 731 SGCAKAGNVELAEHAAEM--AILSDPKDSGSFTMLSNIYASK--GMWTEAKKVRERMK 784


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 360/597 (60%), Gaps = 8/597 (1%)

Query: 183 KLFQQMK--SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           KL Q ++  S E +P+  TY   +  C          ++H  ++      DP +   L+ 
Sbjct: 61  KLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIG 120

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+  GS+D AR +F    ++ +  WN +       G   E   L+  M R GV  D+ T
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180

Query: 301 LSTVLK----SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            + VLK    S  +   +   K++HA   +  + S  YI+ +L+D Y + G V+ A  +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSA 414
                 ++V+ ++MI  YA+ G   EAL+ + EM  + ++ +P+S    S+L ACA+L+A
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            EQGK +H +I++ G  S     ++LV MY +CG ++   R F  + DR +VSW+++I  
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
              HG GK+A+Q+F +ML +G  P  +T VSVL AC+H GLV E K  FE+M +  GI+P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             EHYACM+D+LGRA +  EA ++V  M  +    VWG+LLG+ RI+ NVE+ + A+  L
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           FA+EP+ +  +VLL++IYA A MWD V +V++ ++   L+K PG  W+EV+ K+Y+F   
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSV 540

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D  +   ++I+A L ++++ + + GY+P  +  L+++E  EKE+++  HSEKLA+AFGLI
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600

Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T  G  IR+ KNLR+C DCH   +FISK + +EI+VRDVNRFH F+NG CSCG YW
Sbjct: 601 NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 195/394 (49%), Gaps = 8/394 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P++ +   +I  C          ++H + +  G D D F A  L+ MY+ +G+++ A  V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME-- 211
           F       I  WNA+     L  H +  L L+ +M    +  + FTYT  LKAC   E  
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 212 LKEL--GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +  L  G+++H  L +    S   +   LVDMYA+ G +D A  +F  MP +N+++W+ +
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254

Query: 270 ISGHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           I+ + +NG   EA   F  M RE      +  T+ +VL++ AS  A+   K +H   ++ 
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +S   ++++L+  YG+CG +E   ++F      D+V+  S+I++Y   G G++A++++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAK 446
            EM     +P      S+L AC++    E+GK++   + +  G          +V++  +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434

Query: 447 CGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHG 479
              +D+A +   ++  + G   W +++G    HG
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 219/475 (46%), Gaps = 56/475 (11%)

Query: 5   CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
           C  +  L   L+VH  ++  G D D F+A  L+ MY+  G+   +R++FD   +R++  W
Sbjct: 87  CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146

Query: 65  NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS----GDSLLGRKIHG 120
           N+LF         EE +  + +M   G+  + F+ + ++ AC  S       + G++IH 
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  + GY S ++    LVDMYA+ G ++ A  VF  +   ++VSW+A+IA    +     
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266

Query: 181 ALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           AL+ F++M  ++ + +PN  T  S L+ACA +   E G+ +H  +++  + S   V   L
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           V MY +CG ++  + +F  M ++++++WN +IS +  +G   +A  +F  M   G     
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSV-KTAFES--DDYIVNSLIDAYGKCGHVEDAVKI 355
            T  +VL         G C     +   K  FE+   D+ +   I+ Y            
Sbjct: 387 VTFVSVL---------GACSHEGLVEEGKRLFETMWRDHGIKPQIEHY------------ 425

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC---ANL 412
              +  VDL+   + +         +EA K+   +QD    P   V  SLL +C    N+
Sbjct: 426 ---ACMVDLLGRANRL---------DEAAKM---VQDMRTEPGPKVWGSLLGSCRIHGNV 470

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
              E+  +      +   +    AGN   L ++YA+    D+  R    +  RG+
Sbjct: 471 ELAERASR------RLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 9/291 (3%)

Query: 1   VLKACTSKK----DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           VLKAC + +     L  G ++H  +   G+ S  ++  +LV MYA+ G    +  +F  +
Sbjct: 184 VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM 243

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDSLL 114
           P R+VVSW+++ +CY       EA+  F+EM+       PN  ++ S++ ACA       
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G+ IHGY ++ G DS +   +ALV MY + G LE    VF  +   D+VSWN++I+   +
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
           H +   A+++F++M ++  +P   T+ S L AC+   L E G++L  ++ +   IK    
Sbjct: 364 HGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIE 423

Query: 234 VGVGLVDMYAKCGSMDE-ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
               +VD+  +   +DE A+M+  +  E     W  ++ G  +  G++E A
Sbjct: 424 HYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCRIHGNVELA 473



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 13/245 (5%)

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E  LK  + +  +E +P       L+  C + S+     +VH HI+  G   D F    L
Sbjct: 59  EGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKL 118

Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           + MY+  GS+D A + F +   R I  W+A+   L   G G+E L ++ +M   GV  + 
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178

Query: 501 ITLVSVLCAC-------NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            T   VL AC       NH     E   H         +  M      ++D+  R G   
Sbjct: 179 FTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM----TTLVDMYARFGCVD 234

Query: 554 EAMELVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            A  +   MP + N   W A++   A+  K  E  +   EM+   +    ++  ++S + 
Sbjct: 235 YASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQ 293

Query: 613 ASAGM 617
           A A +
Sbjct: 294 ACASL 298


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/585 (40%), Positives = 333/585 (56%), Gaps = 35/585 (5%)

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+H  L +  +   PI+   L   YA  G +D +  +F      ++  W  +I GH   G
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              +A + +  M  +GV  +  T S++LK       I   K +H+ +VK  F+SD Y+  
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALHSQAVKLGFDSDLYVRT 163

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA---------------------- 375
            L+D Y + G V  A ++F       LV+ T+M+T YA                      
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 376 ---------QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
                    Q G+  EAL L+  M   +  P+     S+L+AC  L A E G+ VH +I 
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
             G   +   G +LV+MY+KCGS++DA   F +I D+ +V+W++MI G A HG  +EALQ
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F  M   G+ P +IT + +L AC H+G V E    F  M+ ++GI+P  EHY CM+++L
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 403

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG  ++A ELV  M  + +  +WG LLGA R++  + +G+   E+L       S T++
Sbjct: 404 GRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 463

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           LLSNIYA+ G WD VA++R  MKD+ +KKEPG S IEV +KV+ F  G  +H + KEIY 
Sbjct: 464 LLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYM 523

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
            L+E++  L   GY P  +  LHD+ E+EKE+ L  HSEKLA+AFGLI T PG TI++ K
Sbjct: 524 MLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVK 583

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLR+C DCH   + ISKI  R+I+VRD NRFHHF NGSCSCG YW
Sbjct: 584 NLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 217/482 (45%), Gaps = 69/482 (14%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           LQ+H ++   G D    +   L   YA  G    S  LF      SV  W ++   +   
Sbjct: 47  LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
              E+A+ F+ +M+  G+ PN F+ SS++  C        G+ +H  ++KLG+DSD++  
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP----GKALHSQAVKLGFDSDLYVR 162

Query: 135 NALVDMYA-------------------------------KVGNLEDAVAVFKDIEHPDIV 163
             L+D+YA                               K G L+ A  +F  +E  D V
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
            WN +I G   +   + AL LF++M  ++  PN  T  S L AC  +   E GR +H  +
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 224 IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
               I+ +  VG  LVDMY+KCGS+++AR++F  + +K+++AWN +I G+  +G   EA 
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
            LF  M R G+     T   +L +             H+  V   ++    I N + D Y
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACG-----------HSGWVTEGWD----IFNKMKDEY 387

Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
           G    +E  ++ +          C  M+    + G  E+A +L   +++  I PD  +  
Sbjct: 388 G----IEPKIEHY---------GC--MVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWG 429

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           +LL AC        G+++ V ++    ++++     L N+YA  G+ D   R  + + D 
Sbjct: 430 TLLGACRLHGKIALGEKI-VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDS 488

Query: 464 GI 465
           G+
Sbjct: 489 GV 490



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 184/405 (45%), Gaps = 53/405 (13%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH    + G D        L   YA +G L+ +VA+F   ++P +  W A+I G  L  
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
            ++ AL  + QM +  + PN FT++S LK C      E G+ LH   +K+   SD  V  
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIA------------------------------- 265
           GL+D+YA+ G +  A+ +F  MPEK+L++                               
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN++I G+ QNG   EA  LF  M +     ++ T+ +VL +     A+   + VH+   
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
               + + ++  +L+D Y KCG +EDA  +F +    D+VA  SMI  YA  G  +EAL+
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS------ 439
           L+  M    ++P +     +L+AC +     +G  +      F  M D +          
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI------FNKMKDEYGIEPKIEHYG 397

Query: 440 -LVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGGLAQHGR 480
            +VN+  + G ++ A      +   PD   V W  ++G    HG+
Sbjct: 398 CMVNLLGRAGHVEQAYELVKNMNIEPDP--VLWGTLLGACRLHGK 440



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 35/239 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C  +     G  +H   V  GFDSD +V   L+ +YA+ G+ + +++LFD +PE+S
Sbjct: 134 ILKLCPIEP----GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 189

Query: 61  VVSWNSLFSCY----------VHCDFLE---------------------EAVCFFKEMVL 89
           +VS  ++ +CY          V  D +E                     EA+  F+ M+ 
Sbjct: 190 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 249

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +  +PNE ++ S+++AC   G    GR +H Y    G   ++    ALVDMY+K G+LED
Sbjct: 250 AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLED 309

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           A  VF  I+  D+V+WN++I G  +H  +  AL+LF+ M    ++P   T+   L AC 
Sbjct: 310 ARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACG 368



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G  VH  +   G   +  V  +LV MY+KCG+  D+R +FD I ++ 
Sbjct: 262 VLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKD 321

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VV+WNS+   Y    F +EA+  FK M   G+ P   +   +++AC  SG    G  I +
Sbjct: 322 VVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 381

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               + G +  +     +V++  + G++E A  + K++   PD V W  ++  C LH
Sbjct: 382 KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 438


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/788 (32%), Positives = 410/788 (52%), Gaps = 82/788 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           +K C S + + +  ++H  ++F G  S  F+ N L+ MY+ CG   D+ R+F  I   +V
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPNEFSLSSMINACAGSGD 111
            SWN++ S +     + EA   F++M          ++SG   N   L + I A    G 
Sbjct: 71  YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG-ELEATIKASGSLGY 129

Query: 112 SLLGRKIHGYSIKLGYDSD-------------------------------MFSANALVDM 140
             L  ++HG++ K  +  D                               +F  N+++  
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           Y+K G+++ A+ +F  +   D VSWN +I+    H      L  F +M +    PN  TY
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTY 249

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            S L AC  +   E G  LH  +++ME   D   G GL+DMYAKCG ++ AR +F  + E
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
            N ++W  +I G  Q G   EA  LF  M    V  DQ TL+TVL    S + I + +Q+
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA------- 373
           HA ++    +S   + N+L+  Y KCG V  A   F+     D+++ T+MITA       
Sbjct: 370 HAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDV 429

Query: 374 ------------------------YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
                                   Y Q G  EE LK+Y++M    +  D    S+ ++AC
Sbjct: 430 EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISAC 489

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           A+L+    G Q+     K GF S+    NS+V MY++CG I++A + FS I  + +VSW+
Sbjct: 490 ADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWN 549

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           AM+ G AQ+G+G++ +++F +ML  G +P+ I+ VSVL  C+H+G V+E +++F SM K 
Sbjct: 550 AMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKD 609

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
            GI PM EH+ CM+D+LGRAG+ ++A  L++ MPF+ NA++WGALL A RI+ N ++ + 
Sbjct: 610 HGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAEL 669

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
           A + L  ++ E   ++ LL+NIY+ +G    V  VR+ M+D  ++K PG SWIEV ++V+
Sbjct: 670 AVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVH 729

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            FTV D +H + K+++        +L +         +  +V  S +     +HSEKLAV
Sbjct: 730 VFTVDDTNHPQIKDVH-------RMLEEIIKKIEEIKNYANVMNSGRSH--NYHSEKLAV 780

Query: 710 AFGLIATP 717
              LI+ P
Sbjct: 781 PLRLISLP 788



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 205/455 (45%), Gaps = 85/455 (18%)

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +  ++K CA +    + R+LH  LI M +KS   +   L++MY+ CG + +A  +F  + 
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVG--------FDQTTLSTVLKSVAS 310
             N+ +WN +ISG   +G   EA  LF  M  R+ V         F    L   +K+  S
Sbjct: 67  FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGS 126

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC------------------------ 346
              + +  Q+H  + K  F  D  +  S++D Y KC                        
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSM 186

Query: 347 -------GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
                  G V+ A+++F +    D V+  +MI+  +Q G G E L  +LEM ++   P+S
Sbjct: 187 IYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNS 246

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
              +S+L+AC ++   E G  +H  I++     D +AG  L++MYAKCG ++ A + F  
Sbjct: 247 MTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDG 306

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC--------- 510
           + +   VSW+++IGG+AQ G  +EAL +F QM E  V  +  TL +VL  C         
Sbjct: 307 LTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIG 366

Query: 511 --NHA------------------------GLVAEAKHHFESMEKKFGIQPMQE--HYACM 542
              HA                        G V +A H FE M       P+++   +  M
Sbjct: 367 EQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELM-------PIRDIISWTAM 419

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           I    +AG  ++A E  D MP + N   W ++L  
Sbjct: 420 ITAFSQAGDVEKAREYFDKMP-ERNVISWNSMLAT 453



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 216/445 (48%), Gaps = 56/445 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACTS  DL  G  +H  +V      D +    L+ MYAKCG    +R++FD + E +
Sbjct: 252 VLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHN 311

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW SL        F EEA+  F +M    +  ++F+L++++  C    D  +G ++H 
Sbjct: 312 AVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHA 371

Query: 121 YSIKLGYDSDMFSANALVDMYAK-------------------------------VGNLED 149
           ++I  G DS +  ANALV MYAK                                G++E 
Sbjct: 372 HTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEK 431

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A   F  +   +++SWN+++A  +   + +  LK++ QM    +  +  T+++++ ACA 
Sbjct: 432 AREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACAD 491

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           + +  LG Q+     K+   S+  V   +V MY++CG ++EA+ +F  +  KNL++WN +
Sbjct: 492 LAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAM 551

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVK- 326
           ++G+ QNG   +   +F  M   G   DQ +  +VL   S + F + G   Q + LS+  
Sbjct: 552 MAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEG---QYYFLSMTK 608

Query: 327 ---TAFESDDYIVNSLIDAYGKCGHVEDAVKI-----FKESSAV---DLVACTSMITAYA 375
               +  S+ ++   ++D  G+ G +E A  +     FK ++A+    L AC      + 
Sbjct: 609 DHGISPMSEHFVC--MVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAAC----RIHG 662

Query: 376 QFGLGEEALKLYLEMQDREINPDSF 400
              L E A+K  LE+ D E  P S+
Sbjct: 663 NTKLAELAVKNLLEL-DAE-GPGSY 685


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/700 (34%), Positives = 379/700 (54%), Gaps = 2/700 (0%)

Query: 4   ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
           AC + + L    ++H  V+ + +     + N ++ MY KCG+  D+R++FD +   +VVS
Sbjct: 168 ACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVS 227

Query: 64  WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
           W S+ S Y       +A+  + +M  SG  P++ +  S+I AC  +GD  LGR++H + I
Sbjct: 228 WTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVI 287

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           K  +   + S NAL+ MY   G +E A  VF  I   D++SW  +I G +   +   AL 
Sbjct: 288 KSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALY 347

Query: 184 LFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           LF+ + +     PN F + S   AC+ +   E G+Q+H   +K  ++ +   G  L DMY
Sbjct: 348 LFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMY 407

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           AK G +  A+M F  +   ++++WN +I+    NG   EA   F  M   G+  D  T  
Sbjct: 408 AKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYI 467

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSA 361
           ++L +  S   +   +Q+H+  VK  F+ +  + NSL+  Y KC H+ DA+ +F++ S  
Sbjct: 468 SLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRN 527

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
            +LV+  ++++A  Q     E  +LY EM      PDS   ++LL  CA L++   G QV
Sbjct: 528 ANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQV 587

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           H + IK G + D    N L++MYAKCGS+  A   F    +  IVSWS++I G AQ G G
Sbjct: 588 HCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLG 647

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
            EAL +F  M   GV PN +T +  L AC+H GLV E    ++SME + GI P +EH++C
Sbjct: 648 HEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSC 707

Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
           ++D+L RAG   EA   +      A+ + W  LL A + + NV++ +  A  +  ++P  
Sbjct: 708 IVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSN 767

Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
           S+  V+L NI+ASAG W+ VAK+R+ MK   ++K PG SWIEVKDK + F   D SH + 
Sbjct: 768 SAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQR 827

Query: 662 KEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY 701
             IY  L+E+   +   GY P     + ++   +K  + Y
Sbjct: 828 NLIYTMLEELWSQVLDDGYDPCQSCYIQNMYLKKKNYIEY 867



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 275/537 (51%), Gaps = 6/537 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    D+ LG Q+H  V+ + F       N+L+ MY   G    +  +F  IP + 
Sbjct: 266 VIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD 325

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++SW ++ + Y+   +  EA+  F++++  G  +PNEF   S+ +AC+   +   G+++H
Sbjct: 326 LISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVH 385

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K G   ++F+  +L DMYAK G L  A   F  I++PDIVSWNA+IA    +   +
Sbjct: 386 GMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN 445

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+  F+QM    + P+  TY S L  C        GRQ+H  ++K+    +  V   L+
Sbjct: 446 EAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLL 505

Query: 240 DMYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
            MY KC  + +A  +F  +    NL++WN ++S  LQ   + E   L+  M+  G   D 
Sbjct: 506 TMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDS 565

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T++T+L + A   ++GV  QVH  S+K+    D  + N LID Y KCG ++ A  +F  
Sbjct: 566 ITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDS 625

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           +  +D+V+ +S+I  YAQ GLG EAL L+  M +  + P+       L+AC+++   E+G
Sbjct: 626 TQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEG 685

Query: 419 KQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
            +++  +  + G        + +V++ A+ G + +A+    +   D  I +W  ++    
Sbjct: 686 WRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACK 745

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            H     A +  G +L+  + P++   + +LC  + +    E       + K+ G+Q
Sbjct: 746 THNNVDIAERGAGNILK--LDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQ 800



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 215/415 (51%), Gaps = 2/415 (0%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           + +S++ ACA        +KIH + +K  Y   +   N +++MY K G+++DA  VF  +
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
           + P++VSW ++I+G   +   + A+ ++ QM  S   P+  T+ S +KAC      +LGR
Sbjct: 221 QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGR 280

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           QLH  +IK            L+ MY   G ++ A  +F  +P K+LI+W  +I+G++Q G
Sbjct: 281 QLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLG 340

Query: 278 GDMEAASLFPWMYREGV-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
             +EA  LF  + R+G    ++    +V  + +S   +   KQVH + VK     + +  
Sbjct: 341 YRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAG 400

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
            SL D Y K G +  A   F +    D+V+  ++I A+A  G   EA+  + +M    + 
Sbjct: 401 CSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLT 460

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PDS    SLL  C +     QG+Q+H +I+K GF  +    NSL+ MY KC  + DA   
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNV 520

Query: 457 FSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           F +I  +  +VSW+A++    Q  +  E  +++ +M   G  P+ IT+ ++L  C
Sbjct: 521 FRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTC 575



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 221/428 (51%), Gaps = 5/428 (1%)

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ-QMKSSEINPNMFTYTSALKACAGM 210
           A+F ++   ++ + + +I  C  H + + AL+ F   +K+S  +    TYTS + ACA  
Sbjct: 115 AIFSNLS-KELPTNSYIIFLCKQHHYKE-ALEAFDFHLKNSNSHFEPSTYTSLVLACANF 172

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
              +  +++H  ++K   +   I+   +++MY KCGSM +AR +F  M   N+++W  +I
Sbjct: 173 RSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMI 232

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           SG+ QNG   +A  ++  M R G   DQ T  +V+K+      I + +Q+HA  +K+ F 
Sbjct: 233 SGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFG 292

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE- 389
                 N+LI  Y   G +E A  +F      DL++  +MIT Y Q G   EAL L+ + 
Sbjct: 293 HHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDL 352

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           ++     P+ F+  S+ +AC++L   E GKQVH   +KFG   + FAG SL +MYAK G 
Sbjct: 353 LRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGF 412

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +  A  AF +I +  IVSW+A+I   A +G   EA+  F QM+  G+ P+ IT +S+LC 
Sbjct: 413 LPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCT 472

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C     + + +    S   K G          ++ +  +     +A+ +   +   AN  
Sbjct: 473 CGSPVRLNQGR-QIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLV 531

Query: 570 VWGALLGA 577
            W A+L A
Sbjct: 532 SWNAILSA 539


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/531 (41%), Positives = 338/531 (63%), Gaps = 5/531 (0%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++MY K   +++A  +F  MP++N+I+W  +IS + +     +A  L   M R+GV  +
Sbjct: 54  LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPN 113

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T S+VL++      +   + +H   +K   ESD Y+ ++LID + K G  EDA+ +F 
Sbjct: 114 VYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFD 170

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    D +   S+I  +AQ    + AL+L+  M+      +    +S+L AC  L+  E 
Sbjct: 171 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 230

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G Q HVHI+K+    D    N+LV+MY KCGS++DA R F+++ +R +++WS MI GLAQ
Sbjct: 231 GMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQ 288

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           +G  +EAL++F  M   G  PN+IT+V VL AC+HAGL+ +  ++F SM+K +GI P +E
Sbjct: 289 NGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGRE 348

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CMID+LG+AGK  +A++L++ M  + +A  W  LLGA R+ +N+ + ++AA+ + A+
Sbjct: 349 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 408

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +PE + T+ +LSNIYA++  WD+V ++R+ M+D  +KKEPG SWIEV  +++ F +GD S
Sbjct: 409 DPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDES 468

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H +  E+  KL+++   L   GYVP     L D+E  + E  L HHSEKLA+AFGL+  P
Sbjct: 469 HPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLP 528

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
               IR++KNLRIC DCH   +  SK+ +R I++RD  R+HHF++G CSCG
Sbjct: 529 SEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/360 (35%), Positives = 200/360 (55%), Gaps = 8/360 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++K C S + +  G  +   + F G     F+ N L+ MY K     D+ +LFD +P+R+
Sbjct: 19  LIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRN 78

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW ++ S Y  C   ++A+     M+  G+RPN ++ SS++ AC G  D    R +H 
Sbjct: 79  VISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV---RMLHC 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK G +SD++  +AL+D++AK+G  EDA++VF ++   D + WN++I G   +  +D 
Sbjct: 136 GIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF++MK +       T TS L+AC G+ L ELG Q H  ++K +   D I+   LVD
Sbjct: 196 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVD 253

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY KCGS+++AR +F+ M E+++I W+ +ISG  QNG   EA  LF  M   G   +  T
Sbjct: 254 MYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYIT 313

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAF--ESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           +  VL +  S   +      +  S+K  +           +ID  GK G ++DAVK+  E
Sbjct: 314 IVGVLFA-CSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNE 372



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 147/290 (50%), Gaps = 21/290 (7%)

Query: 293 GVGFDQTTLSTVLKSVASFQAIG----VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           G+  D  T S ++K   S +A+     +C+ ++        +   ++VN LI+ Y K   
Sbjct: 8   GLWADSATYSELIKCCLSHRAVHEGNLICRHLYF----NGHQPMMFLVNVLINMYVKFNL 63

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           + DA ++F +    ++++ T+MI+AY++  + ++AL+L + M    + P+ +  SS+L A
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
           C  +S     + +H  IIK G  SD +  ++L++++AK G  +DA   F E+     + W
Sbjct: 124 CNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVA---EAKHHFES 525
           +++IGG AQ+ R   AL++F +M   G +    TL SVL AC    L+    +A  H   
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240

Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            ++   +         ++D+  + G  ++A  + + M  + +   W  ++
Sbjct: 241 YDQDLILN------NALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMI 283



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 4/174 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ACT    L LG+Q H  V    +D D  + N+LV MY KCG+  D+RR+F+ + ER 
Sbjct: 218 VLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERD 275

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V++W+++ S      + +EA+  F+ M  SG +PN  ++  ++ AC+ +G    G     
Sbjct: 276 VITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 335

Query: 121 YSIKL-GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGC 172
              KL G +        ++D+  K G L+DAV +  ++E  PD V+W  ++  C
Sbjct: 336 SMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 389



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           +Q   +  DS   S L+  C +  A  +G  +  H+   G     F  N L+NMY K   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++DA + F ++P R ++SW+ MI   ++    ++AL++   ML DGV PN  T  SVL A
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 510 CN--------HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           CN        H G++ E            G++      + +ID+  + G+ ++A+ + D 
Sbjct: 124 CNGMSDVRMLHCGIIKE------------GLESDVYVRSALIDVFAKLGEPEDALSVFDE 171

Query: 562 MPFQANASVWGALLGA 577
           M    +A VW +++G 
Sbjct: 172 M-VTGDAIVWNSIIGG 186


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/858 (31%), Positives = 419/858 (48%), Gaps = 124/858 (14%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +LKAC++     +G  VHG V+    +SD FV N+L+  Y+ CG+   SR +F ++ ER 
Sbjct: 189  ILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERD 248

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VVSW +L S Y+     +EA   F  M L G++P                          
Sbjct: 249  VVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKP-------------------------- 282

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE----HPDIVSWNAVIAGCVLHE 176
                     D+ S +AL+  +A+ G ++ A+   +++      P + SWN +I+GCV + 
Sbjct: 283  ---------DLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNG 333

Query: 177  HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
            + + AL +F +M     +PN+ T  S L AC G++   LG+ +H    K  I  +  V  
Sbjct: 334  YLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEG 393

Query: 237  GLVDMYAKCGSMDEARMIFHLMPEKNLIAWN----------------------------- 267
             ++DMY+KCGS D A  +F     KN   WN                             
Sbjct: 394  SVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKP 453

Query: 268  ------IVISGHLQNGGDMEAASLFPWMYREGV------------GFDQTTLS-TVLKSV 308
                   ++SGH +NG   +A  L   M + G+            GF Q+ LS   LK  
Sbjct: 454  DVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVF 513

Query: 309  ASFQ-------------------------AIGVC---------KQVHALSVKTAFESDDY 334
               Q                         A+  C         K++H  +++  FE + +
Sbjct: 514  RIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIF 573

Query: 335  IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
            + ++L+D Y KC  ++ A K+F      + V+  +++  Y      EEALKL+LEM    
Sbjct: 574  VSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEG 633

Query: 395  INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDA 453
            + P S     L  AC +++A   G+ +H +  K        A  ++L++MYAKCGSI DA
Sbjct: 634  LQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDA 693

Query: 454  DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
               F    ++ +  W+AMI   + HG  + A  +F QM   G+ P+HIT VS+L AC   
Sbjct: 694  KSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARD 753

Query: 514  GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
            GLV E   +F SME  +G+    EHY CM+ ILG AG   EA++ +  MP+  +A +W  
Sbjct: 754  GLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWAT 813

Query: 574  LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
            LL A R++ N E+G+ AA+ LF +EP+ ++ ++LLSNIY S+GMWD    +R FM+  KL
Sbjct: 814  LLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKL 873

Query: 634  KKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEE 693
                  S++ V     TF  G+ SH   +EI    D ++  +  +GY P+    + D EE
Sbjct: 874  LTIKECSYLTVGSHXCTFKGGESSHPELEEILETWDXLARKMELSGYFPL--DPVFDDEE 931

Query: 694  SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
             E +     H+EKLA+ FG+I++     + V KN+R+C+DCHTS + ISKI  REI V+D
Sbjct: 932  KELDPFSCLHTEKLAICFGIISSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKD 991

Query: 754  VNRFHHFRNGSCSCGGYW 771
            V  +HH ++G C C   W
Sbjct: 992  VCFYHHMKDGICXCQDRW 1009



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/580 (23%), Positives = 248/580 (42%), Gaps = 86/580 (14%)

Query: 16  QVHGIVV-FTGFDSDEFVANSLVVMYAKCG-NFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H  VV          + N LVV+Y K   +  D+R+L D IP R+V ++ +L   Y  
Sbjct: 101 QIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCR 160

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
            +  +E    F+ MV  G+ P+++ + +++ AC+      +G+ +HG+ I+   +SD+F 
Sbjct: 161 SEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFV 220

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            NAL+  Y+  G+L  + +VF  ++  D+VSW A+I+  +     D A  +F  M+   +
Sbjct: 221 GNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGV 280

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P++ ++++ L                                     +A+ G +D A  
Sbjct: 281 KPDLISWSALLSG-----------------------------------FARNGEIDLALE 305

Query: 254 IFHLMPEKNLI----AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
               MPE+ L     +WN +ISG +QNG   +A  +F  M       +  T++++L +  
Sbjct: 306 TLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACT 365

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
             +A+ + K +H ++ K     + Y+  S+ID Y KCG  + A K+F ++   +      
Sbjct: 366 GLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNE 425

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI AY   G  E+AL L   MQ     PD    +++L+  A      Q  ++   +++ G
Sbjct: 426 MIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMG 485

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF- 488
              +                               +VS++ +I G  Q G   EAL++F 
Sbjct: 486 LKPN-------------------------------VVSFNVLISGFQQSGLSYEALKVFR 514

Query: 489 -----------GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
                       ++L   + PN IT+   L AC    L  + K        + G +P   
Sbjct: 515 IMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGK-EIHGYTLRNGFEPNIF 573

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
             + ++D+  +      A ++   +  + N   W AL+  
Sbjct: 574 VSSALVDMYAKCHDMDSANKVFFRIDGR-NTVSWNALMAG 612



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 224/480 (46%), Gaps = 42/480 (8%)

Query: 88  VLSGIRPNEFSLS-SMINACAGSGDSLLGRKIHGYSIKLG---YDSDMFSANALVDMYAK 143
            L+   P E S S S++N C+   +    R+IH   +KL    + S +   N LV +Y K
Sbjct: 74  TLTNSSPTEISDSISLLNRCSTLSEF---RQIHARVVKLNALKWKSSI--GNKLVVLYCK 128

Query: 144 -VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
              +LEDA  +  +I +  + ++ A+I      E  D     F+ M    + P+ +   +
Sbjct: 129 NQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPT 188

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            LKAC+ M L  +G+ +H  +I+  ++SD  VG  L+  Y+ CG +  +R +FH M E++
Sbjct: 189 ILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERD 248

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           +++W  +IS +++ G   EA  +F  M  +GV  D  + S +L   A    I        
Sbjct: 249 VVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEID------- 301

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
           L+++T  E  +  +   ++++                          +I+   Q G  E+
Sbjct: 302 LALETLEEMPERGLQPTVNSW------------------------NGIISGCVQNGYLED 337

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL ++  M     +P+    +S+L AC  L A   GK +H    K G + + +   S+++
Sbjct: 338 ALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVID 397

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY+KCGS D A++ F +  ++    W+ MI      G+ ++AL +   M +DG  P+ IT
Sbjct: 398 MYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVIT 457

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
             ++L      GL  +A      M  + G++P    +  +I    ++G   EA+++   M
Sbjct: 458 YNTILSGHARNGLKTQAXELLSEM-VQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIM 516



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 14/311 (4%)

Query: 318 KQVHALSVK-TAFESDDYIVNSLIDAYGKCG-HVEDAVKIFKESSAVDLVACTSMITAYA 375
           +Q+HA  VK  A +    I N L+  Y K    +EDA K+  E     + A  ++I +Y 
Sbjct: 100 RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           +    +E    +  M    + PD ++  ++L AC+ +     GK VH  +I+    SD F
Sbjct: 160 RSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVF 219

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
            GN+L++ Y+ CG +  +   F  + +R +VSW+A+I    + G   EA  +F  M  DG
Sbjct: 220 VGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDG 279

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V P+ I+  ++L      G +  A    E M ++ G+QP    +  +I    + G  ++A
Sbjct: 280 VKPDLISWSALLSGFARNGEIDLALETLEEMPER-GLQPTVNSWNGIISGCVQNGYLEDA 338

Query: 556 MELVDTM---PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           +++   M   P   N     ++L A    K + +G+    +        +  H ++ N+Y
Sbjct: 339 LDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXI--------AXKHGIVGNVY 390

Query: 613 ASAGMWDNVAK 623
               + D  +K
Sbjct: 391 VEGSVIDMYSK 401


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 378/657 (57%), Gaps = 3/657 (0%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
           +  ++N L+ MY +C     +R +FD + +R+ VSW ++ + +       +A+  F  M+
Sbjct: 79  NTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSML 138

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
             G  P+EF+L S + ACA  GD  LGR++H  +IK      +   NALV MY+K G++ 
Sbjct: 139 RLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVG 198

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN-PNMFTYTSALKAC 207
           D  A+F+ I   D+ SW ++IAG         AL +F++M +  ++ PN F + S  +AC
Sbjct: 199 DGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRAC 258

Query: 208 AG-MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           +  +   E G Q+H   +K ++  +   G  L DMYA+C  +D A  +F+ +   +L++W
Sbjct: 259 SVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSW 318

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I+    +G   EA  LF  M    +  D  T+  +L +     A+   + +H+  VK
Sbjct: 319 NSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVK 378

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
                D  + NSLI  Y +C     A+ +F E++  D+V   S++TA  Q    E+  KL
Sbjct: 379 LGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKL 438

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           +  +     + D    +++L+A A L  +E  KQVH +  K G +SD    N+L++ YAK
Sbjct: 439 FRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAK 498

Query: 447 CGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
           CGS+DDA++ F  +   R + SWS++I G AQ G  KEAL +F +M   GV PNH+T V 
Sbjct: 499 CGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVG 558

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+  GLV E  +++  ME ++GI P +EH +C+ID+L RAG+  EA + VD MPF+
Sbjct: 559 VLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFE 618

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
            +  +W  LL A+R + +VE+G+ AAE +  I+P  S+ +VLL NIYAS+G W+  A+++
Sbjct: 619 PDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLK 678

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           + M+ + ++K PG SWI++K ++  F V DRSH  S E+Y  LD +   + KAGY+P
Sbjct: 679 KDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGFEMVKAGYIP 735



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 266/515 (51%), Gaps = 13/515 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           ++AC    DL LG QVH   + +       V N+LV MY+K G+  D   LF+ I ++ +
Sbjct: 153 VRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDL 212

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSL-LGRKIH 119
            SW S+ +         +A+  F+EM+  G+  PNEF   S+  AC+   +SL  G +IH
Sbjct: 213 FSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIH 272

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +K   D + ++  +L DMYA+   L+ A+ VF  IE PD+VSWN++I          
Sbjct: 273 GLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLS 332

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A+ LF +M+ S + P+  T  + L AC G +    GR +H  L+K+ +  D +V   L+
Sbjct: 333 EAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLI 392

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY +C     A  +FH   +++++ WN +++  +Q+    +   LF  ++      D+ 
Sbjct: 393 SMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRI 452

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK-E 358
           +L+ VL + A      + KQVHA + K    SD  + N+LID Y KCG ++DA K+F+  
Sbjct: 453 SLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIM 512

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  D+ + +S+I  YAQFG  +EAL L+  M++  + P+      +L AC+ +   ++G
Sbjct: 513 GTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG 572

Query: 419 KQVH-VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
              + +   ++G +      + ++++ A+ G + +A +   ++P +  I+ W+ ++    
Sbjct: 573 CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASR 632

Query: 477 QHGRGKEALQMFGQMLEDGVL---PNHITLVSVLC 508
            H   +      G+   +GVL   P+H     +LC
Sbjct: 633 THNDVE-----MGKRAAEGVLNIDPSHSAAYVLLC 662



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 236/513 (46%), Gaps = 51/513 (9%)

Query: 1   VLKACTSK-KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V +AC+     L  G Q+HG+ V    D + +   SL  MYA+C     + ++F  I   
Sbjct: 254 VFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESP 313

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            +VSWNSL + +     L EA+  F EM  S ++P+  ++ +++ AC G      GR IH
Sbjct: 314 DLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIH 373

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
            Y +KLG   D+   N+L+ MY +  +   A+ VF +    D+V+WN+++  CV H H +
Sbjct: 374 SYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHME 433

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
              KLF+ + SS  + +  +  + L A A +   E+ +Q+H    K+ + SD I+   L+
Sbjct: 434 DVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALI 493

Query: 240 DMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           D YAKCGS+D+A  +F +M   +++ +W+ +I G+ Q G   EA  LF  M   GV  + 
Sbjct: 494 DTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNH 553

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T   VL +         C +V  +      +   Y  + +   YG     E        
Sbjct: 554 VTFVGVLIA---------CSRVGLV------DEGCYYYSIMEPEYGIVPTKEH------- 591

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
                   C+ +I   A+ G   EA K   +M      PD  + ++LL A    +  E G
Sbjct: 592 --------CSCVIDLLARAGRLSEAAKFVDQM---PFEPDIIMWNTLLAASRTHNDVEMG 640

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K+    ++     S + A   L N+YA  G+ ++  R   ++   G+           Q 
Sbjct: 641 KRAAEGVLNID-PSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGV-----------QK 688

Query: 479 GRGKEALQMFGQM----LEDGVLPNHITLVSVL 507
             GK  +++ G++    +ED   P    + ++L
Sbjct: 689 SPGKSWIKLKGELKVFIVEDRSHPESDEMYTML 721



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 5/111 (4%)

Query: 409 CANLSAYEQGKQVHVHIIKFG-----FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           C+ L ++ QG+ VH H++           +T   N L+ MY +C + D A   F  + DR
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
             VSW+A+I   AQ+ R  +A+ +F  ML  G  P+   L S + AC   G
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELG 160


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/659 (36%), Positives = 369/659 (55%), Gaps = 35/659 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH ++IK+G  SD    N ++      + GN+  A  VF  I HP +  WN +I G  
Sbjct: 24  KQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYS 83

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
              H +  + ++  M +S I P+ FT+  +LK        + G++L    +K    S+  
Sbjct: 84  KISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLF 143

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           V    + M++ CG +D A  +F +     ++ WNI++SG                 Y   
Sbjct: 144 VQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSG-----------------YNRV 186

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLID-AYGKCGHVEDA 352
             F  + +  VL + +  + +   K +             YI   +++  +  CG +++A
Sbjct: 187 KQFKISKMLLVLSACSKLKDLEWGKHIF-----------KYINGGIVEHMFAACGEMDEA 235

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             +F      D+V+ T+MI  Y +      AL L+ EMQ   + PD F   S+L ACA L
Sbjct: 236 QGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALL 295

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
            A E G+ V   I K    +D+F GN+LV+MY KCG++  A + F E+  +   +W+ MI
Sbjct: 296 GALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMI 355

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
            GLA +G G+EAL MF  M+E  V P+ IT + VLCAC    +V + K  F +M  + GI
Sbjct: 356 VGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGI 411

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
           +P   HY CM+D+LG  G  +EA+E++  MP + N+ VWG+ LGA R++KNV++   AA+
Sbjct: 412 KPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAK 471

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
            +  +EPE  + +VLL NIYA++  W+N+ +VR+ M +  +KK PG S +E+   VY F 
Sbjct: 472 QILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFV 531

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
            GD+SH +SKEIYAKL+ +   L KAGY P       D+ E +KE  LY HSEKLA+A+ 
Sbjct: 532 AGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYA 591

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI++ PG TIR+ KNLR+CVDCH   + +S+  +RE+IV+D  RFHHFR+GSCSC  +W
Sbjct: 592 LISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 236/505 (46%), Gaps = 39/505 (7%)

Query: 9   KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNS 66
           K ++   Q+H   +  G  SD    N ++      + GN   + ++FD IP  S+  WN+
Sbjct: 18  KSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNT 77

Query: 67  LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           +   Y      E  V  +  M+ S I+P+ F+    +           G+++  +++K G
Sbjct: 78  MIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHG 137

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
           +DS++F   A + M++  G ++ A  VF   +  ++V+WN +++G             + 
Sbjct: 138 FDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSG-------------YN 184

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD-MYAKC 245
           ++K  +I+  +      L AC+ ++  E G+ +              +  G+V+ M+A C
Sbjct: 185 RVKQFKISKMLLV----LSACSKLKDLEWGKHIF-----------KYINGGIVEHMFAAC 229

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           G MDEA+ +F  M  +++++W  +I G+L+    + A +LF  M    V  D+ T+ ++L
Sbjct: 230 GEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSIL 289

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
            + A   A+ + + V     K + ++D ++ N+L+D Y KCG+V  A K+FKE    D  
Sbjct: 290 IACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKF 349

Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
             T+MI   A  G GEEAL ++  M +  + PD      +L AC      ++GK    ++
Sbjct: 350 TWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNM 405

Query: 426 -IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGRGKE 483
            ++ G          +V++    G +++A      +P +   + W + +G    H   + 
Sbjct: 406 TMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQL 465

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLC 508
           A     Q+LE  + P +  +  +LC
Sbjct: 466 ADMAAKQILE--LEPENGAVYVLLC 488



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 178/413 (43%), Gaps = 74/413 (17%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           LK  T    L  G ++    V  GFDS+ FV  + + M++ CG    + ++FD      V
Sbjct: 114 LKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEV 173

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI---NACAGSGDSLLGRKI 118
           V+WN + S Y                     R  +F +S M+   +AC+   D   G+ I
Sbjct: 174 VTWNIMLSGYN--------------------RVKQFKISKMLLVLSACSKLKDLEWGKHI 213

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
             Y           +   +  M+A  G +++A  VF +++  D+VSW A+I G +   H 
Sbjct: 214 FKY----------INGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHF 263

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL LF++M+ S + P+ FT  S L ACA +   ELG  +   + K   K+D  VG  L
Sbjct: 264 IGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNAL 323

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMY KCG++ +A+ +F  M +K+   W  +I G   NG   EA ++F  M    V  D+
Sbjct: 324 VDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDE 383

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFE--SDDYIVNSLIDAYGKCGHVEDAVKIF 356
            T             IGV         K+ F   +  + +   +  YG            
Sbjct: 384 ITY------------IGVLCACMVDKGKSFFTNMTMQHGIKPTVTHYG------------ 419

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
                VDL+ C          G  EEAL++ + M    + P+S V  S L AC
Sbjct: 420 ---CMVDLLGCV---------GCLEEALEVIVNM---PVKPNSIVWGSPLGAC 457



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 18/269 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVV-MYAKCGNFIDSRRLFDAIPER 59
           VL AC+  KDL  G  +            +++   +V  M+A CG   +++ +FD +  R
Sbjct: 197 VLSACSKLKDLEWGKHIF-----------KYINGGIVEHMFAACGEMDEAQGVFDNMKTR 245

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
            VVSW ++   Y+  +    A+  F+EM +S ++P+EF++ S++ ACA  G   LG  + 
Sbjct: 246 DVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVK 305

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               K    +D F  NALVDMY K GN+  A  VFK++   D  +W  +I G  ++ H +
Sbjct: 306 TCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGE 365

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-L 238
            AL +F  M  + + P+  TY   L AC    + + G+    ++         +   G +
Sbjct: 366 EALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCM 421

Query: 239 VDMYAKCGSMDEARMIFHLMPEK-NLIAW 266
           VD+    G ++EA  +   MP K N I W
Sbjct: 422 VDLLGCVGCLEEALEVIVNMPVKPNSIVW 450


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/527 (41%), Positives = 327/527 (62%), Gaps = 1/527 (0%)

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTV 304
             M  A  IF+ +   N+  WN +I G  ++     A  LF  M+    +  D  T   +
Sbjct: 83  APMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFL 142

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            K+VA    + + + +H++ V+  F+S  ++ NSL+  Y   G  E A ++F+  S  D 
Sbjct: 143 FKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDR 202

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           VA  S+I  +A  G+  EAL LY EM    + PD F   SLL+AC  L A   G++VH++
Sbjct: 203 VAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMY 262

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           ++K G + +  A N+L+++Y+KCG+  DA + F E+ +R +VSW+++I GLA +G G EA
Sbjct: 263 MVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEA 322

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           L++FG++   G+ P+ IT V VL AC+H G++ E  ++F  M++++GI P  EH+ CM+D
Sbjct: 323 LKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVD 382

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +L RAGK  +A + +  MP   NA +W  LLGA  I+ ++E+G+ A   +  +E   S  
Sbjct: 383 LLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGD 442

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
            VLLSN+YAS   W +V  VR+ M    +KK PG S +E+K++VY F +GDRSH +S+E 
Sbjct: 443 FVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEET 502

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           YA L +++ LL   GYVP     L D+EE EKE  L HH+EK+A+AF L+ TPPG  IR+
Sbjct: 503 YAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRI 562

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH + + ISK+  REIIVRD +RFHHF++GSCSC  YW
Sbjct: 563 MKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 187/384 (48%), Gaps = 7/384 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDM--FSANALVDMYAKVGNLEDAVAVFKDIE 158
           S++  C  S   L  ++IH +SI+ G       F+ + +  + +    +  A  +F  I+
Sbjct: 39  SLVQLCGSSQSKL--KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGR 217
            P+I +WN +I G    E+   A++LF QM + S I P+  T+    KA A +    LG 
Sbjct: 97  APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H  +++    S   V   LV MY+  G  + A  +F +M  ++ +AWN VI+G   NG
Sbjct: 157 GIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNG 216

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA +L+  M  EGV  D  T+ ++L +     A+ + ++VH   VK     + +  N
Sbjct: 217 MPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASN 276

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y KCG+  DA K+F E     +V+ TS+I   A  GLG EALKL+ E++ + + P
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKP 336

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
                  +L AC++    ++G      +  ++G +        +V++  + G + DA   
Sbjct: 337 SEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDY 396

Query: 457 FSEIP-DRGIVSWSAMIGGLAQHG 479
              +P     V W  ++G    HG
Sbjct: 397 IRNMPVPPNAVIWRTLLGACTIHG 420



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 151/285 (52%), Gaps = 9/285 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + KA     D+ LG  +H +VV  GFDS  FV NSLV MY+  G    + ++F+ +  R 
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRD 201

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WNS+ + +       EA+  ++EM   G+ P+ F++ S+++AC   G   LG ++H 
Sbjct: 202 RVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHM 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K+G   +  ++NAL+D+Y+K GN  DA  VF ++E   +VSW ++I G  ++   + 
Sbjct: 262 YMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNE 321

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--L 238
           ALKLF +++   + P+  T+   L AC+   + + G   +   +K E    P +     +
Sbjct: 322 ALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFN-YFRRMKEEYGILPRIEHHGCM 380

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIV-----ISGHLQNG 277
           VD+  + G + +A      MP   N + W  +     I GHL+ G
Sbjct: 381 VDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELG 425



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 136/256 (53%), Gaps = 1/256 (0%)

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGS 109
           ++F+ I   ++ +WN++   +   +    AV  F +M   S I P+  +   +  A A  
Sbjct: 90  QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            D  LG  IH   ++ G+DS  F  N+LV MY+  G  E A  VF+ + + D V+WN+VI
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVI 209

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
            G  L+   + AL L+++M S  + P+ FT  S L AC  +    LG ++H  ++K+ + 
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            +      L+D+Y+KCG+  +A+ +F  M E+++++W  +I G   NG   EA  LF  +
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGEL 329

Query: 290 YREGVGFDQTTLSTVL 305
            R+G+   + T   VL
Sbjct: 330 ERQGLKPSEITFVGVL 345


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/562 (40%), Positives = 346/562 (61%), Gaps = 7/562 (1%)

Query: 217 RQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGS---MDEARMIFHLMPEK-NLIAWNIVIS 271
           RQ+H   I+  +  SD  +G  L+       S   M  A  +F  + +  N+  WN +I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 272 GHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G+ + G  + A SL+  M   G V  D  T   ++K+V +   + + + +H++ +++ F 
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           S  Y+ NSL+  Y  CG V  A K+F +    DLVA  S+I  +A+ G  EEAL LY EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
             + I PD F   SLL+ACA + A   GK+VHV++IK G   +  + N L+++YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCA 509
           ++A   F E+ D+  VSW+++I GLA +G GKEA+++F  M   +G+LP  IT V +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H G+V E   +F  M +++ I+P  EH+ CM+D+L RAG+ ++A E + +MP Q N  
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W  LLGA  ++ + ++ + A   +  +EP  S  +VLLSN+YAS   W +V K+R+ M 
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
            + +KK PG S +EV ++V+ F +GD+SH +S  IYAKL E++  L   GYVP +     
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           DVEE EKE  + +HSEK+A+AF LI+TP  + I V KNLR+C DCH + + +SK+ +REI
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           +VRD +RFHHF+NGSCSC  YW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 165/274 (60%), Gaps = 5/274 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KA T+  D+ LG  +H +V+ +GF S  +V NSL+ +YA CG+   + ++FD +PE+ 
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ + +      EEA+  + EM   GI+P+ F++ S+++ACA  G   LG+++H 
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK+G   ++ S+N L+D+YA+ G +E+A  +F ++   + VSW ++I G  ++     
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG- 237
           A++LF+ M+S+E + P   T+   L AC+   + + G + +   ++ E K +P I   G 
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGC 365

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           +VD+ A+ G + +A      MP + N++ W  ++
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 192/403 (47%), Gaps = 29/403 (7%)

Query: 116 RKIHGYSIKLGYD-SDMFSANALVDMYAKVGN---LEDAVAVFKDIEHP-DIVSWNAVIA 170
           R+IH +SI+ G   SD      L+     + +   +  A  VF  IE P ++  WN +I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 171 GCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           G     ++  A  L+++M+ S  + P+  TY   +KA   M    LG  +H  +I+    
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
           S   V   L+ +YA CG +  A  +F  MPEK+L+AWN VI+G  +NG   EA +L+  M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             +G+  D  T+ ++L + A   A+ + K+VH   +K     + +  N L+D Y +CG V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNA 408
           E+A  +F E    + V+ TS+I   A  G G+EA++L+  M+  E + P       +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333

Query: 409 CANLSAYEQG----------KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           C++    ++G           ++   I  FG M         V++ A+ G +  A     
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM---------VDLLARAGQVKKAYEYIK 384

Query: 459 EIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            +P    +V W  ++G    HG    A     Q+L+  + PNH
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ--LEPNH 425



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 186/415 (44%), Gaps = 50/415 (12%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI 118
           +V  WN+L   Y        A   ++EM +SG + P+  +   +I A     D  LG  I
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   I+ G+ S ++  N+L+ +YA  G++  A  VF  +   D+V+WN+VI G   +   
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + AL L+ +M S  I P+ FT  S L ACA +    LG+++H  +IK+ +  +      L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFD 297
           +D+YA+CG ++EA+ +F  M +KN ++W  +I G   NG   EA  LF +M   EG+   
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIVNSLIDAYGKCGHVEDA 352
           + T   +L + +           H   VK  FE      ++Y +   I+ +G        
Sbjct: 324 EITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFG-------- 364

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
                    VDL+A    +             K Y  ++   + P+  +  +LL AC   
Sbjct: 365 -------CMVDLLARAGQVK------------KAYEYIKSMPMQPNVVIWRTLLGACTVH 405

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
              +  +   + I++   +    +G+   L NMYA      D  +   ++   G+
Sbjct: 406 GDSDLAEFARIQILQ---LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/695 (35%), Positives = 384/695 (55%), Gaps = 28/695 (4%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           L+EA  F KEM  + +     S   +  AC        GR IH    +   +      N 
Sbjct: 68  LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ MY   G+  D   VF ++   ++VSW  VI+    +   + A++LF  M++S I PN
Sbjct: 128 LLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
              Y S L++C G    ELG+Q+H  +I+ ++ ++  V   + +MY +CG ++ A+++F 
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M  +N + W  ++ G+ Q      A  LF  M  EGV  D+   S VLK     +   +
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDM 307

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            KQ+H+  VK   ES+  +   L+D Y KCG +E A + F   S  + V+ +++I+ ++Q
Sbjct: 308 GKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G  E+ +K++  ++   +  +SF+ +S+  ACA  +    G Q H   IK G +S  + 
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            +++V MY+KCG +D A RAF  I +   V+W+A+I G A HG   EAL  F +M   GV
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            PN +T ++VL AC+H+GLVAEAK +  SM + +G++P  +HY CMID   RAG   EA+
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEAL 547

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
           EL++ MPF+ +A  W +LLG    + ++++G+ AAE LF ++P  ++ ++LL N+Y++ G
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W+    VR+ M + +LKKE   SWI VK +V+          R   +  + D+VS  L 
Sbjct: 608 KWEEAGHVRKLMAERELKKEVSCSWISVKGQVH----------RPVRLLNEEDDVSCSL- 656

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
                            + KEQLL  HSEKLA+AFGLI+T   A I V KNLR C DCH 
Sbjct: 657 ----------------PARKEQLL-DHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHE 699

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             + +S +  R+I+VRD  RFHHF++G CSC  YW
Sbjct: 700 FGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 249/480 (51%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC   + L  G  +H  +  T  +    + N L+ MY  CG+ ID +++FD +  ++
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKN 152

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW  + S Y     LE+A+  F +M  SGIRPN     S++ +C G     LG+++H 
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHS 212

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+   ++++    A+ +MY + G LE A  VF  ++  + V+W  ++ G    +  + 
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+LF +M    +  + F ++  LK C  +E  ++G+Q+H  ++K+  +S+  VG  LVD
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVD 332

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y KCG ++ A   F  + E N ++W+ +ISG  Q+G   +   +F  +  EGV  +   
Sbjct: 333 FYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFI 392

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++V ++ A+   + +  Q H  ++K    S  Y  ++++  Y KCG ++ A + F+   
Sbjct: 393 YTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID 452

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D VA T++I+ YA  G   EAL  +  MQ   + P++    ++L AC++     + KQ
Sbjct: 453 EPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512

Query: 421 VHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
               + + +G        + +++ Y++ G + +A    + +P +   +SW +++GG   H
Sbjct: 513 YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAH 572



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 8/220 (3%)

Query: 371 ITAYAQFGLGEEALKLYLEMQDREIN--PDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           + + ++ G  +EA     EM D +++  P S+ C  L  AC  L +   G+ +H  + + 
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQC--LFEACGKLRSLADGRLIHDRLRRT 116

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMF 488
                    N L+ MY  CGS  D  + F E+  + +VSW  +I   A++G  ++A+++F
Sbjct: 117 VKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLF 176

Query: 489 GQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILG 547
             M   G+ PN    +S+L +C     +   K  H   +  +       E   C + +  
Sbjct: 177 SDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYV-- 234

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           R G  + A  + D M  Q NA  W  L+      K +EV 
Sbjct: 235 RCGWLEGAKLVFDGMDAQ-NAVTWTGLMVGYTQAKKLEVA 273


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/689 (34%), Positives = 392/689 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    ++ L   VH +    GF  D F+ +SL+ +Y   G   D++ LFD +P R 
Sbjct: 183 VIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRD 242

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WN + + YV       A+  F+EM  S ++PN  S   +++ CA  G    G ++HG
Sbjct: 243 CILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHG 302

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I+ G++SD   AN ++ MY+K GNL DA  +F  +   D V+WN +IAG V +   D 
Sbjct: 303 LVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDE 362

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF+ M +S +  +  T+ S L +       +  +++H  +++  +  D  +   LVD
Sbjct: 363 AVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVD 422

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y K G ++ A   F      ++     +ISG++ NG ++EA +LF W+ +EG+  +  T
Sbjct: 423 IYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLT 482

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + A+  ++ + K++H   +K   E+   + +S+   Y K G ++ A + F+   
Sbjct: 483 MASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMP 542

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V    MI +++Q G  E A+ L+ +M       DS   S+ L+ACAN  A   GK+
Sbjct: 543 VKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKE 602

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +++  F+SDTF  ++L++MY+KCG +  A   F  +  +  VSW+++I     HGR
Sbjct: 603 LHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGR 662

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +E L +F +M+E G+ P+H+T + ++ AC HAGLV E  ++F  M +++GI    EH+A
Sbjct: 663 PRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFA 722

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+ GRAG+  EA + + +MPF  +A  WG+LLGA R++ NVE+ + A++ L  ++P 
Sbjct: 723 CMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPN 782

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VLLSN++A AG W++V KVR  MK+  ++K PG SWI+V    + F+  D  H +
Sbjct: 783 NSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQ 842

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           S EIY  L  +   L K GYVP     LH
Sbjct: 843 SVEIYLILKNLLLELRKHGYVPQPYLPLH 871



 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 299/563 (53%), Gaps = 4/563 (0%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
           Q+H  V+  G +    + + ++ MY  C +F D   LF  +     + WN L   +    
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             + A+ FF  M+ S + P++++   +I AC G  +  L + +H  +  +G+  D+F  +
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           +L+ +Y   G + DA  +F ++   D + WN ++ G V +   + AL  FQ+M++S + P
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N  ++   L  CA   +   G QLH  +I+   +SDP V   ++ MY+KCG++ +AR IF
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
            +MP+ + + WN +I+G++QNG   EA +LF  M   GV  D  T ++ L SV    ++ 
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
            CK+VH+  V+     D Y+ ++L+D Y K G VE A K F++++ VD+  CT+MI+ Y 
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             GL  EAL L+  +    + P+    +S+L ACA L++ + GK++H  I+K G  +   
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
            G+S+  MYAK G +D A + F  +P +  V W+ MI   +Q+G+ + A+ +F QM   G
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576

Query: 496 VLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
              + ++L + L AC N+  L    + H   +   F         + +ID+  + GK   
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVA--STLIDMYSKCGKLAL 634

Query: 555 AMELVDTMPFQANASVWGALLGA 577
           A  + D M ++   S W +++ A
Sbjct: 635 ARSVFDMMDWKNEVS-WNSIIAA 656



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 238/481 (49%), Gaps = 7/481 (1%)

Query: 99  LSSMINACAGSGDSLLG---RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
           L SM  A   S  SL+    R+IH   +  G +  +   + ++ MY    + +D   +F 
Sbjct: 76  LESMFRAFPNSDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFC 135

Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
            ++    + WN +I G  +    D+AL  F +M  S + P+ +T+   +KAC G+    L
Sbjct: 136 RLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPL 195

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
            + +H     M    D  +G  L+ +Y   G + +A+ +F  +P ++ I WN++++G+++
Sbjct: 196 CKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVK 255

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           NG    A   F  M    V  +  +   +L   A+   +    Q+H L +++ FESD  +
Sbjct: 256 NGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTV 315

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            N++I  Y KCG++ DA KIF      D V    +I  Y Q G  +EA+ L+  M    +
Sbjct: 316 ANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGV 375

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
             DS   +S L +     + +  K+VH +I++ G   D +  ++LV++Y K G ++ A +
Sbjct: 376 KLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACK 435

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AG 514
            F +     +   +AMI G   +G   EAL +F  ++++G++PN +T+ SVL AC   A 
Sbjct: 436 TFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALAS 495

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           L    + H + ++K  G++ + +  + +  +  ++G+   A +    MP + ++  W  +
Sbjct: 496 LKLGKELHCDILKK--GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLM 552

Query: 575 L 575
           +
Sbjct: 553 I 553


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/658 (37%), Positives = 372/658 (56%), Gaps = 40/658 (6%)

Query: 116 RKIHGYSIK--LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           R +H   I   L Y+S +     L+  YA + ++  A  VF +I   +++  N +I   V
Sbjct: 60  RTVHSRIISEDLRYNSSL--GVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYV 117

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
            +      +++F  M S  + P+ +T+   LKAC+      +G+++H S  K+ + S   
Sbjct: 118 NNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLF 177

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG GLV MY KCG + EAR++   M  +++++WN +++G+ QN    +A  +   M    
Sbjct: 178 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVK 237

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  D  T++++L +V++     V      + VK  F                        
Sbjct: 238 ISHDAGTMASLLPAVSNTTTENV------MYVKDMF-----------------------F 268

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K+ K+S    LV+   MI  Y +  +  EA++LY  M+     PD+   +S+L AC + S
Sbjct: 269 KMGKKS----LVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTS 324

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A   GK++H +I +   + +    N+L++MYAKCG +D A   F  +  R +VSW+AMI 
Sbjct: 325 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMIS 384

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
                GRG +A+ +F +M + G++P+ I  V+ L AC+HAGL+ E +  F+ M   + I 
Sbjct: 385 AYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 444

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EH ACM+D+LGRAGK +EA + +  MP + N  VWGALLGA R++ N ++G  AA+ 
Sbjct: 445 PRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADK 504

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF + PE+S  +VLLSNIYA AG W+ V  +R  MK   LKK PG S +EV   ++TF V
Sbjct: 505 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 564

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
           GDRSH +S EIY +LD +   + + GYVP  E+ LHDVEE +KE  L  HSEKLA+ F L
Sbjct: 565 GDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFAL 624

Query: 714 IATP---PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
           + T        IR+ KNLRIC DCH + + IS+I SREII+RD NRFH FR G CSC 
Sbjct: 625 MNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 148/559 (26%), Positives = 268/559 (47%), Gaps = 80/559 (14%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFS 69
           DL     VH  ++      +  +   L+  YA   +   +R++FD IPER+V+  N +  
Sbjct: 55  DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
            YV+  F  E +  F  M    ++P+ ++   ++ AC+ SG+ ++G+KIHG + K+G  S
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
            +F  N LV MY K G L +A  V  ++   D+VSWN+++AG   ++  D AL++ ++M+
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
           S +I+ +  T  S L A +    + +                         MY K     
Sbjct: 235 SVKISHDAGTMASLLPAVSNTTTENV-------------------------MYVKD---- 265

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
               +F  M +K+L++WN++I  +++N   +EA  L+  M  +G   D  ++++VL +  
Sbjct: 266 ----MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACG 321

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
              A+ + K++H    +     +  + N+LID Y KCG ++ A  +F+   + D+V+ T+
Sbjct: 322 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTA 381

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI+AY   G G +A+ L+ +MQD  + PDS    + L AC++    E+G+        F 
Sbjct: 382 MISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC------FK 435

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
            M+D +                       +I  R +   + M+  L + G+ KEA +   
Sbjct: 436 LMTDHY-----------------------KITPR-LEHLACMVDLLGRAGKVKEAYKFIQ 471

Query: 490 QMLEDGVLPNHITLVSVLCACN-HA----GLVAEAKHHFESMEKKFGIQPMQE-HYACMI 543
           +M    + PN     ++L AC  H+    GL+A         +K F + P Q  +Y  + 
Sbjct: 472 EM---PMEPNERVWGALLGACRVHSNTDIGLLA--------ADKLFQLAPEQSGYYVLLS 520

Query: 544 DILGRAGKFQEAMELVDTM 562
           +I  +AG+++E   + + M
Sbjct: 521 NIYAKAGRWEEVTNIRNIM 539



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 170/368 (46%), Gaps = 52/368 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+   ++ +G ++HG     G  S  FV N LV MY KCG   ++R + D +  R 
Sbjct: 147 VLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 206

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL + Y      ++A+   +EM            S  I+  AG+  SLL    + 
Sbjct: 207 VVSWNSLVAGYAQNQRFDDALEVCREME-----------SVKISHDAGTMASLLPAVSNT 255

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +  + Y  DMF                     FK +    +VSWN +I   + +     
Sbjct: 256 TTENVMYVKDMF---------------------FK-MGKKSLVSWNVMIGVYMKNAMPVE 293

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L+  M++    P+  + TS L AC       LG+++H  + + ++  + ++   L+D
Sbjct: 294 AVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 353

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +D AR +F  M  +++++W  +IS +  +G   +A +LF  M   G+      
Sbjct: 354 MYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGL------ 407

Query: 301 LSTVLKSVASFQAIGVCKQVHALSV-KTAFE--SDDYIVNS-------LIDAYGKCGHVE 350
              V  S+A    +  C     L   ++ F+  +D Y +         ++D  G+ G V+
Sbjct: 408 ---VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 464

Query: 351 DAVKIFKE 358
           +A K  +E
Sbjct: 465 EAYKFIQE 472


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/761 (35%), Positives = 407/761 (53%), Gaps = 96/761 (12%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           LF++    +V  + S+   Y H     + V  F+ M   G+RP+ F    +I + AG+G 
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKS-AGNG- 113

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD----IVSWNA 167
              G   H + +KLG+ SD F  NA++DMYA++G +  A  VF +I  PD    +  WNA
Sbjct: 114 ---GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEI--PDYERKVADWNA 168

Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
           +++G    E    A  LF  M       N+ T+T+                         
Sbjct: 169 MVSGYWKWESEGQAQWLFDVMPER----NVITWTA------------------------- 199

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
                     +V  YAK   ++ AR  F  MPE+++++WN ++SG+ QNG   E   LF 
Sbjct: 200 ----------MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFD 249

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQ----AIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
            M   G+  D+TT  TV+ + +S      A  + + +H   ++     + ++  +L+D Y
Sbjct: 250 EMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL----NCFVRTALLDMY 305

Query: 344 GKCGHVEDAVKIFKESSAV--------------------------------DLVACTSMI 371
            KCG +  A +IF E  A                                 ++V   SMI
Sbjct: 306 AKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMI 365

Query: 372 TAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
             YAQ G    A++L+ EM   +++ PD     S+++AC +L A E G  V   + +   
Sbjct: 366 AGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQI 425

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
                  N+++ MY++CGS++DA R F E+  R +VS++ +I G A HG G EA+ +   
Sbjct: 426 KLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMST 485

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M E G+ P+ +T + VL AC+HAGL+ E +  FES++      P  +HYACM+D+LGR G
Sbjct: 486 MKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVG 540

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           + ++A   ++ MP + +A V+G+LL A+RI+K VE+G+ AA  LF +EP+ S   +LLSN
Sbjct: 541 ELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSN 600

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
           IYASAG W +V ++R  MK   +KK  G SW+E   K++ F V DRSH RS +IY  L E
Sbjct: 601 IYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIE 660

Query: 671 VSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRI 730
           +   + +AGY+      L DVEE EKE+++  HSEKLA+ + L+ +  GA IRV KNLR+
Sbjct: 661 LRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRV 720

Query: 731 CVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           C DCHT+ + ISK+  R IIVRD NRFH F +G CSC  YW
Sbjct: 721 CWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 138/583 (23%), Positives = 239/583 (40%), Gaps = 158/583 (27%)

Query: 2   LKACTSKKDLFL-----------GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSR 50
           ++ C  + D F+           G+  H  V+  G  SD FV N+++ MYA+ G    +R
Sbjct: 91  MQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHAR 150

Query: 51  R---------------------------------LFDAIPERSVVSWNSLFSCYVHCDFL 77
           +                                 LFD +PER+V++W ++ + Y     L
Sbjct: 151 KVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDL 210

Query: 78  EEAVCFF-------------------------------KEMVLSGIRPNEFSLSSMINAC 106
           E A  +F                                EMV +GI P+E +  ++I+AC
Sbjct: 211 EAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISAC 270

Query: 107 AGSGDSLLG----RKIHGYSIK----------------------------LGYDSDMFSA 134
           +  GD  L     R +H   I+                            LG   +  + 
Sbjct: 271 SSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTW 330

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEI 193
           NA++  Y +VGNL+ A  +F  +   ++V+WN++IAG   +  +  A++LF++M  + ++
Sbjct: 331 NAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 390

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+  T  S + AC  +   ELG  +   L + +IK        ++ MY++CGSM++A+ 
Sbjct: 391 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 450

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M  ++++++N +ISG   +G  +EA +L   M   G+  D+ T   VL + +    
Sbjct: 451 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS---- 506

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMI 371
                  HA                        G +E+  K+F+  +  A+D  AC  M+
Sbjct: 507 -------HA------------------------GLLEEGRKVFESIKDPAIDHYAC--MV 533

Query: 372 TAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
               + G  E+A +    M+   + P + V  SLLNA       E G+     +  F   
Sbjct: 534 DLLGRVGELEDAKR---TMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKL--FELE 588

Query: 432 SDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGI---VSWS 469
            D  +GN ++  N+YA  G   D +R    +   G+     WS
Sbjct: 589 PDN-SGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWS 630


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/695 (36%), Positives = 381/695 (54%), Gaps = 39/695 (5%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDM--YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           ++IH   ++     D ++A+ L     ++    L+ A  VF  I  P++ SWN +I    
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                  ++ +F +M   S   PN FT+   +KA A      +G+ +H   IK     D 
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
            V   L+  YA CG +D A ++F ++    K++++WN +++G +Q G   +A  LF  M 
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMR 335

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
            EGV  +  T+ +V+ + A    + + ++V     +     +  + N+ ID + KCG VE
Sbjct: 336 NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395

Query: 351 DAVKIFKESSAVDLVACTSMITAYA-------------------------------QFGL 379
            A  +F      D+V+ T++I  YA                               Q G 
Sbjct: 396 IARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGR 455

Query: 380 GEEALKLYLEMQDRE--INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
            +EAL ++ E+Q  +    PD     S L+ACA L A + G+ +H +I K     +    
Sbjct: 456 PKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLA 515

Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
            SL++MY+K G ++ A   F  I ++ +  WSAMI GLA HGRG+ A+++F  M E  V 
Sbjct: 516 TSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVK 575

Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
           PN +T  ++LCAC+H+GLV E K  F+ ME+ +G+ P  +HY+CM+D+LGRAG  +EA++
Sbjct: 576 PNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALK 635

Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
            ++ MP   +ASVWGALLGA  I+ N+E+ + A   L  IEP     +VLLSN+YA  G 
Sbjct: 636 FIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGD 695

Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
           W+ V+++R+ M+D+ LKKE G S IE+   V+ F VGD +H  S++IYAKLDE+   L  
Sbjct: 696 WEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRS 755

Query: 678 AGYVPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
            GYV      L  VEE E KE+ L  HSEK+A+AFGLI       IR+ KNLR+C DCHT
Sbjct: 756 HGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHT 815

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             + +SK+  R+I++RD  RFHHF  G CSC  YW
Sbjct: 816 VAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 270/533 (50%), Gaps = 43/533 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSL--VVMYAKCGNFIDSRRLFDAIPE 58
           + + CTS K L    Q+H  ++ T    D + A+ L     ++       +R++FD IP+
Sbjct: 145 LFQQCTSFKQL---KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQ 201

Query: 59  RSVVSWNSLFSCY-VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            ++ SWN L        D ++  + F + +  S   PN+F+   +I A A     L+G+ 
Sbjct: 202 PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKA 261

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE--HPDIVSWNAVIAGCVLH 175
           +HG +IK  +  D+F  N+L+  YA  G+L+ A  VF+ IE  + DIVSWN+++ G V  
Sbjct: 262 VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG 321

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
            + D AL LF++M++  ++PN  T  S + ACA      LGR++   + + E+  +  V 
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381

Query: 236 VGLVDMYAKCG----------------------------SMDE---ARMIFHLMPEKNLI 264
              +DM+ KCG                             M E   AR IF  MP K++ 
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441

Query: 265 AWNIVISGHLQNGGDMEAASLFP--WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           AWN++ISG+ Q+G   EA ++F    + + G   DQ TL + L + A   A+ + + +H 
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
              K   + +  +  SLID Y K G VE A+++F      D+   ++MI   A  G GE 
Sbjct: 502 YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEA 561

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLV 441
           A++L+L+MQ+ ++ P+S   ++LL AC++    ++GK++   + + +G +  T   + +V
Sbjct: 562 AIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMV 621

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE 493
           ++  + G +++A +    +P     S W A++G    HG  + A +   ++LE
Sbjct: 622 DVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLE 674


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/527 (41%), Positives = 327/527 (62%), Gaps = 1/527 (0%)

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTV 304
             M  A  IF+ +   N+  WN +I G  ++     A  LF  M+    +  D  T   +
Sbjct: 83  APMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFL 142

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            K+VA    + + + +H++ V+  F+S  ++ NSL+  Y   G +  A ++F+  S  D 
Sbjct: 143 FKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDR 202

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           VA  S+I  +A  G+  EAL LY EM    + PD F   SLL+AC  L A   G++VH++
Sbjct: 203 VAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMY 262

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           ++K G + +  A N+L+++Y+KCG+  DA + F E+ +R +VSW+++I GLA +G G EA
Sbjct: 263 MVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEA 322

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           L++FG++   G+ P+ IT V VL AC+H G++ E  ++F  M++++GI P  EH+ CM+D
Sbjct: 323 LKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVD 382

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +L RAGK  +A + +  MP   NA +W  LLGA  I+ ++E+G+ A   +  +E   S  
Sbjct: 383 LLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGD 442

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
            VLLSN+YAS   W +V  VR+ M    +KK PG S +E+K++VY F +GDRSH +S+E 
Sbjct: 443 FVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEET 502

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
           YA L +++ LL   GYVP     L D+EE EKE  L HH+EK+A+AF L+ TPPG  IR+
Sbjct: 503 YAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRI 562

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH + + ISK+  REIIVRD +RFHHF++GSCSC  YW
Sbjct: 563 MKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 7/384 (1%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDM--FSANALVDMYAKVGNLEDAVAVFKDIE 158
           S++  C  S   L  ++IH +SI+ G       F+ + +  + +    +  A  +F  I+
Sbjct: 39  SLVQLCGSSQSKL--KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGR 217
            P+I +WN +I G    E+   A++LF QM + S I P+  T+    KA A +    LG 
Sbjct: 97  APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H  +++    S   V   LV MY+  GS+  A  +F +M  ++ +AWN VI+G   NG
Sbjct: 157 GIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNG 216

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA +L+  M  EGV  D  T+ ++L +     A+ + ++VH   VK     + +  N
Sbjct: 217 MPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASN 276

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y KCG+  DA K+F E     +V+ TS+I   A  GLG EALKL+ E++ + + P
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKP 336

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
                  +L AC++    ++G      +  ++G +        +V++  + G + DA   
Sbjct: 337 SEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDY 396

Query: 457 FSEIP-DRGIVSWSAMIGGLAQHG 479
              +P     V W  ++G    HG
Sbjct: 397 IRNMPVPPNAVIWRTLLGACTIHG 420



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 152/285 (53%), Gaps = 9/285 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + KA     D+ LG  +H +VV  GFDS  FV NSLV MY+  G+   + ++F+ +  R 
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRD 201

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WNS+ + +       EA+  ++EM   G+ P+ F++ S+++AC   G   LG ++H 
Sbjct: 202 RVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHM 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K+G   +  ++NAL+D+Y+K GN  DA  VF ++E   +VSW ++I G  ++   + 
Sbjct: 262 YMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNE 321

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--L 238
           ALKLF +++   + P+  T+   L AC+   + + G   +   +K E    P +     +
Sbjct: 322 ALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFN-YFRRMKEEYGILPRIEHHGCM 380

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIV-----ISGHLQNG 277
           VD+  + G + +A      MP   N + W  +     I GHL+ G
Sbjct: 381 VDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELG 425



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 138/256 (53%), Gaps = 1/256 (0%)

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGS 109
           ++F+ I   ++ +WN++   +   +    AV  F +M   S I P+  +   +  A A  
Sbjct: 90  QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            D  LG  IH   ++ G+DS  F  N+LV MY+ +G+L  A  VF+ + + D V+WN+VI
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVI 209

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
            G  L+   + AL L+++M S  + P+ FT  S L AC  +    LG ++H  ++K+ + 
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            +      L+D+Y+KCG+  +A+ +F  M E+++++W  +I G   NG   EA  LF  +
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGEL 329

Query: 290 YREGVGFDQTTLSTVL 305
            R+G+   + T   VL
Sbjct: 330 ERQGLKPSEITFVGVL 345


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/636 (37%), Positives = 373/636 (58%), Gaps = 7/636 (1%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++  YA+   L +A+ +F+ I   D+VSWN++I GC+       A KLF +M    +   
Sbjct: 92  MLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTV--- 148

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             ++T+ +     + + +    L  ++  M+   D      ++  Y   G +D+A  +F 
Sbjct: 149 -VSWTTLVDGLLRLGIVQEAETLFWAMEPMD--RDVAAWNAMIHGYCSNGRVDDALQLFC 205

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            MP +++I+W+ +I+G   NG   +A  LF  M   GV      L   L + A   A  V
Sbjct: 206 QMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRV 265

Query: 317 CKQVHALSVKTA-FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
             Q+H    K   +  D+++  SL+  Y  C  +E A ++F E     +V  T+++T Y 
Sbjct: 266 GIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYG 325

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
                 EAL+++ EM   ++ P+    +S LN+C  L   E+GK +H   +K G  S  +
Sbjct: 326 LNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGY 385

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
            G SLV MY+KCG + DA   F  I ++ +VSW+++I G AQHG G  AL +F QML +G
Sbjct: 386 VGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREG 445

Query: 496 VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEA 555
           V P+ IT+  +L AC+H+G++ +A+  F    +K  +    EHY  M+D+LGR G+ +EA
Sbjct: 446 VDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEA 505

Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
             +V +MP +AN+ VW ALL A R + N+++ + AA  +F IEP+ S+ +VLLSN+YAS+
Sbjct: 506 EAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASS 565

Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
             W  VA +RR MK N + K+PG SW+ +K + + F   DRSH  +++IY KL+ +   L
Sbjct: 566 SRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKL 625

Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
            + GYVP  +  LHDVE  +KE++L +HSE+LA+AFGL++T  G+ I V KNLR+C DCH
Sbjct: 626 KELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCH 685

Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + + ++KIV REI+VRD +RFH F+NG CSCG YW
Sbjct: 686 NAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 228/462 (49%), Gaps = 19/462 (4%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           YA+     ++  LF  IP + VVSWNS+    +HC  +  A   F EM     R    S 
Sbjct: 96  YAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMP----RRTVVSW 151

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGY-----DSDMFSANALVDMYAKVGNLEDAVAVF 154
           ++++       D LL   I   +  L +     D D+ + NA++  Y   G ++DA+ +F
Sbjct: 152 TTLV-------DGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDALQLF 204

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
             +   D++SW+++IAG   +  ++ AL LF+ M +S +  +       L A A +    
Sbjct: 205 CQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWR 264

Query: 215 LGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           +G Q+HCS+ K+ +   D  V   LV  YA C  M+ A  +F  +  K+++ W  +++G+
Sbjct: 265 VGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGY 324

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
             N    EA  +F  M R  V  ++++ ++ L S    + I   K +HA +VK   ES  
Sbjct: 325 GLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGG 384

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
           Y+  SL+  Y KCG+V DAV +FK  +  ++V+  S+I   AQ G G  AL L+ +M   
Sbjct: 385 YVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLRE 444

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLVNMYAKCGSIDD 452
            ++PD    + LL+AC++    ++ +    +  +   ++ T     S+V++  +CG +++
Sbjct: 445 GVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEE 504

Query: 453 ADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           A+     +P +   + W A++    +H     A +   Q+ E
Sbjct: 505 AEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFE 546



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 204/404 (50%), Gaps = 34/404 (8%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D    N+++  Y   G   D+ +LF  +P R V+SW+S+ +   H    E+A+  F++
Sbjct: 178 DRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRD 237

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG-YDSDMFSANALVDMYAKVG 145
           MV SG+  +   L   ++A A      +G +IH    KLG +  D F + +LV  YA   
Sbjct: 238 MVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCK 297

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +E A  VF ++ +  +V W A++ G  L++ +  AL++F +M   ++ PN  ++TSAL 
Sbjct: 298 QMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALN 357

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           +C G+E  E G+ +H + +KM ++S   VG  LV MY+KCG + +A  +F  + EKN+++
Sbjct: 358 SCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVS 417

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL----------KSVASFQAIG 315
           WN VI G  Q+G  M A +LF  M REGV  D  T++ +L          K+   F+  G
Sbjct: 418 WNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFG 477

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI-----FKESSAVDLVACTSM 370
                   SV    E       S++D  G+CG +E+A  +      K +S V L A  S 
Sbjct: 478 -----QKRSVTLTIEH----YTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWL-ALLSA 527

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
              ++   L + A       Q  EI PD   CS+     +NL A
Sbjct: 528 CRKHSNLDLAKRAAN-----QIFEIEPD---CSAAYVLLSNLYA 563



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 9/266 (3%)

Query: 13  LGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCY 71
           +G+Q+H  V   G +  DEFV+ SLV  YA C     + R+F  +  +SVV W +L + Y
Sbjct: 265 VGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGY 324

Query: 72  VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDM 131
              D   EA+  F EM+   + PNE S +S +N+C G  D   G+ IH  ++K+G +S  
Sbjct: 325 GLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGG 384

Query: 132 FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS 191
           +   +LV MY+K G + DAV VFK I   ++VSWN+VI GC  H    WAL LF QM   
Sbjct: 385 YVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLRE 444

Query: 192 EINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV----GLVDMYAKCGS 247
            ++P+  T T  L AC+   + +  R   C       K    + +     +VD+  +CG 
Sbjct: 445 GVDPDGITVTGLLSACSHSGMLQKAR---CFFRYFGQKRSVTLTIEHYTSMVDVLGRCGE 501

Query: 248 MDEARMIFHLMPEK-NLIAWNIVISG 272
           ++EA  +   MP K N + W  ++S 
Sbjct: 502 LEEAEAVVMSMPMKANSMVWLALLSA 527



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 139/297 (46%), Gaps = 40/297 (13%)

Query: 247 SMDEARMIFHLMPE-------------------------------KNLIAWNIVISGHLQ 275
           S+DEAR IF  +P                                K++++WN +I G L 
Sbjct: 70  SLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLH 129

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAFESDDY 334
            G  + A  LF  M R  V    T +  +L+       +G+ ++   L       + D  
Sbjct: 130 CGDIVTARKLFDEMPRRTVVSWTTLVDGLLR-------LGIVQEAETLFWAMEPMDRDVA 182

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
             N++I  Y   G V+DA+++F +  + D+++ +SMI      G  E+AL L+ +M    
Sbjct: 183 AWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASG 242

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDA 453
           +   S V    L+A A + A+  G Q+H  + K G +  D F   SLV  YA C  ++ A
Sbjct: 243 VCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAA 302

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
            R F E+  + +V W+A++ G   + + +EAL++FG+M+   V+PN  +  S L +C
Sbjct: 303 CRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSC 359



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C   +D+  G  +H   V  G +S  +V  SLVVMY+KCG   D+  +F  I E++V
Sbjct: 356 LNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNV 415

Query: 62  VSWNS-LFSCYVH-CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VSWNS +  C  H C     A+  F +M+  G+ P+  +++ +++AC+ SG     R   
Sbjct: 416 VSWNSVIVGCAQHGCGMW--ALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFF 473

Query: 120 GY-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
            Y   K      +    ++VD+  + G LE+A AV   +    + + W A+++ C  H +
Sbjct: 474 RYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSN 533

Query: 178 NDWALKLFQQMKSSEINPN 196
            D A +   Q+   EI P+
Sbjct: 534 LDLAKRAANQI--FEIEPD 550



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           S+D+A   F +IP   +  ++ M+   AQ+ R +EA+ +F ++    V    ++  S++ 
Sbjct: 70  SLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV----VSWNSIIK 125

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM-PFQAN 567
            C H G +  A+  F+ M ++  +      +  ++D L R G  QEA  L   M P   +
Sbjct: 126 GCLHCGDIVTARKLFDEMPRRTVVS-----WTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180

Query: 568 ASVWGALL 575
            + W A++
Sbjct: 181 VAAWNAMI 188


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/724 (35%), Positives = 383/724 (52%), Gaps = 70/724 (9%)

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y+  +    A   +K M+ + +  + ++   +I AC+        +++H + +KLG+DSD
Sbjct: 188 YIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSD 247

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           ++  N L++ ++   N+ DA  VF +    D VSWN+++AG +   + + A  ++ QM  
Sbjct: 248 VYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPE 307

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             I                                       I    ++ ++   G + E
Sbjct: 308 RSI---------------------------------------IASNSMIVLFGMRGLVVE 328

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  +F  M EK+++ W+ +I+   QN    EA   F  M++ GV  D+    + L + A+
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL------ 364
              + + K +H+LS+K   ES   + N+LI  Y KCG +  A K+F E+  +DL      
Sbjct: 389 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 448

Query: 365 -------------------------VACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
                                    V+ +SMI+ YAQ  L +E L L+ EMQ     PD 
Sbjct: 449 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDE 508

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               S+++ACA L+A EQGK VH +I + G   +   G +L++MY KCG ++ A   F  
Sbjct: 509 TTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYG 568

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           + ++GI +W+A+I GLA +G  + +L MF  M +  V PN IT + VL AC H GLV E 
Sbjct: 569 MIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 628

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
           +HHF SM     IQP  +HY CM+D+LGRAGK QEA EL++ MP   + + WGALLGA +
Sbjct: 629 QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 688

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
            + + E+G+     L  ++P+    HVLLSNIYAS G WD+V ++R  M  +++ K PG 
Sbjct: 689 KHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGC 748

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           S IE    ++ F  GD++H     I   L E++  L   GY P +   L DV+E EKE  
Sbjct: 749 SMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKEST 808

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
           L+ HSEKLA+AFGLI   P   IR+ KNLRIC DCHT+ + ISK   R+I+VRD +RFHH
Sbjct: 809 LFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHH 868

Query: 760 FRNG 763
           F  G
Sbjct: 869 FEQG 872



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 246/537 (45%), Gaps = 82/537 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++AC+ ++  +   QVH  V+  GFDSD +V N+L+  ++ C N  D+ R+F+      
Sbjct: 219 LIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLD 278

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS+ + Y+    +EEA   + +M                                 
Sbjct: 279 SVSWNSILAGYIEIGNVEEAKHIYHQMP-------------------------------- 306

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                  +  + ++N+++ ++   G + +A  +F ++   D+V+W+A+IA    +E  + 
Sbjct: 307 -------ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 359

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ F  M    +  +     SAL ACA + +  +G+ +H   +K+  +S   +   L+ 
Sbjct: 360 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 419

Query: 241 MYAKCGSM-------------------------------DEARMIFHLMPEKNLIAWNIV 269
           MY+KCG +                               D A+ IF  MPEK++++W+ +
Sbjct: 420 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 479

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG+ QN    E  +LF  M   G   D+TTL +V+ + A   A+   K VHA   +   
Sbjct: 480 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 539

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +  +  +LID Y KCG VE A+++F       +    ++I   A  GL E +L ++  
Sbjct: 540 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 599

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQ-----VHVHIIKFGFMSDTFAGNSLVNMY 444
           M+   + P+      +L AC ++   ++G+      +H H I+     +      +V++ 
Sbjct: 600 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ----PNVKHYGCMVDLL 655

Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            + G + +A+   + +P    + +W A++G   +HG  +   ++  +++E  + P+H
Sbjct: 656 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDH 710



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 206/451 (45%), Gaps = 65/451 (14%)

Query: 33  ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI 92
           +NS++V++   G  +++ +LFD + E+ +V+W++L +C+   +  EEA+  F  M   G+
Sbjct: 313 SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 372

Query: 93  RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL----- 147
             +E    S ++ACA      +G+ IH  S+K+G +S +   NAL+ MY+K G++     
Sbjct: 373 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432

Query: 148 --------------------------EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
                                     ++A A+F  +   D+VSW+++I+G   ++  D  
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 492

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           L LFQ+M+ S   P+  T  S + ACA +   E G+ +H  + +  +  + I+G  L+DM
Sbjct: 493 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 552

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCG ++ A  +F+ M EK +  WN +I G   NG    +  +F  M +  V  ++ T 
Sbjct: 553 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF 612

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             VL         G C+ +                  L+D  G+  H    +   K    
Sbjct: 613 MGVL---------GACRHM-----------------GLVDE-GQ-HHFYSMIHDHKIQPN 644

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
           V    C  M+    + G  +EA +L   M    + PD     +LL AC      E G++V
Sbjct: 645 VKHYGC--MVDLLGRAGKLQEAEELLNRM---PMTPDVATWGALLGACKKHGDSEMGRRV 699

Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
              +I+     D F    L N+YA  G  DD
Sbjct: 700 GRKLIELQPDHDGFHV-LLSNIYASKGKWDD 729



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 175/444 (39%), Gaps = 104/444 (23%)

Query: 232 PIVGVGLVDMYA---KCGSMDEARMIFHLMPEKNLIAWNIVISG----HLQNGGDMEAAS 284
           P    GL+ + A   K  S+++  ++    P+ N   W +        ++Q      A +
Sbjct: 142 PSSASGLLKLMAPSRKSRSVNKGFLLLMRYPQAN--TWKMPAKASRRAYIQTNSPHFAFT 199

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
           L+  M    +G D  T   ++++ +  ++    KQVH   +K  F+SD Y+ N+LI+ + 
Sbjct: 200 LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 259

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI--------- 395
            C ++ DA ++F ESS +D V+  S++  Y + G  EEA  +Y +M +R I         
Sbjct: 260 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVL 319

Query: 396 ------------------NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG 437
                               D    S+L+        YE+  +  V + K G M D    
Sbjct: 320 FGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVA 379

Query: 438 -----------------------------------NSLVNMYAKCGSI------------ 450
                                              N+L+ MY+KCG I            
Sbjct: 380 VSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL 439

Query: 451 -------------------DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
                              D+A   F  +P++ +VSWS+MI G AQ+    E L +F +M
Sbjct: 440 LDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM 499

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
              G  P+  TLVSV+ AC     + + K    +  K+ G+         +ID+  + G 
Sbjct: 500 QMSGFKPDETTLVSVISACARLAALEQGK-WVHAYIKRNGLTINVILGTTLIDMYMKCGC 558

Query: 552 FQEAMELVDTMPFQANASVWGALL 575
            + A+E+   M  +   S W AL+
Sbjct: 559 VETALEVFYGM-IEKGISTWNALI 581


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/692 (36%), Positives = 378/692 (54%), Gaps = 26/692 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  CT +KDL  G  +H  ++ TG  S  ++ NSLV +YAKCG+ + ++ +F++I  + 
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 61  VVSWNSLFSCY-----VHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
           VVSWN L + Y     V   F+ E    F+ M      PN  + S +  A + S ++  G
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVME---LFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
            + H  +IK     D+F  ++L++MY K+G + DA  VF  I   + VSW  +I+G  + 
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                A +LF  M+  E   + F YTS L A    +L   G+Q+HC  +K  + S   VG
Sbjct: 193 RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 252

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             LV MY KCG +D+A   F L  +K+ I W+ +I+G+ Q G   EA +LF  M+  G  
Sbjct: 253 NALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
             + T   V+ + +   A+   KQ+H  S+K  +E   Y          KCG + DA K 
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKG 372

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+V  TS                    MQ   I P     +S+L AC++L+A 
Sbjct: 373 FDYLKEPDIVLWTS------------------CRMQMERIMPHELTMASVLRACSSLAAL 414

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           EQGKQ+H   IK+GF  +   G++L  MYAKCGS++D +  F  +P R I++W+AMI GL
Sbjct: 415 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 474

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           +Q+G G +AL++F ++      P+++T V+VL AC+H GLV   K +F  M  +FGI P 
Sbjct: 475 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPR 534

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHYACM+DIL RAGK  E  E +++        +W  LLGA R Y+N E+G +A E L 
Sbjct: 535 VEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLM 594

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
            +  ++SS ++LLS+IY + G  D+V +VRR MK   + KEPG SWIE+K +V+ F VGD
Sbjct: 595 ELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGD 654

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           + H +  +I ++L  + D +    Y    +T+
Sbjct: 655 QIHPQIVKICSELRRLRDHMKDECYESFNDTN 686



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 244/493 (49%), Gaps = 26/493 (5%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M L  + P   S   ++  C    D   G+ IH   ++ G  S ++  N+LV++YAK G+
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA--LKLFQQMKSSEINPNMFTYTSAL 204
           +  A  VF+ I + D+VSWN +I G        ++  ++LFQ+M++    PN  T++   
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            A +       G Q H   IK     D  VG  L++MY K G M +AR +F  +PE+N +
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           +W  +ISG+       EA  LF  M RE    D+   ++VL ++     +   KQ+H L+
Sbjct: 181 SWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
           +K    S   + N+L+  YGKCG ++DA K F+ S   D +  ++MIT YAQ G   EAL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMY 444
            L+  M      P  F    ++NAC+++ A E+GKQ+H + +K G+    +       + 
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLK 360

Query: 445 AKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
           AKCGS+ DA + F  + +  IV W++                   +M  + ++P+ +T+ 
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSC------------------RMQMERIMPHELTMA 402

Query: 505 SVLCACNHAGLVAEAKH-HFESMEKKFGIQ-PMQEHYACMIDILGRAGKFQEAMELVDTM 562
           SVL AC+    + + K  H ++++  F ++ P+    + M     + G  ++   +   M
Sbjct: 403 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTM---YAKCGSLEDGNLVFRRM 459

Query: 563 PFQANASVWGALL 575
           P + +   W A++
Sbjct: 460 PSR-DIMTWNAMI 471


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/673 (35%), Positives = 371/673 (55%), Gaps = 36/673 (5%)

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           +I +CA  G    GR+IH    ++G  SD++ +N LV MY K G+LE+A  VF+     +
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC-AGMELKELGRQLH 220
           + SW  +I  C  H  +  AL LF +M    I P+  ++T+A+ AC AG E    GR LH
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
             L +   +   +    LV MY+KCGS++E+   F  M E N ++WN +I+   ++   +
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGL 219

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           EA      M+ EG                    I  C             SD  +  +L+
Sbjct: 220 EALRTLQKMFLEG--------------------IRAC-------------SDVVVGTTLV 246

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           + Y KC  + DA   F +    +++    +I+AY Q    +EA++L+  M    +  D  
Sbjct: 247 NMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEV 306

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSE 459
              ++L AC    A E G+ +H  + +    S+     N ++NMY KCGS+ DA+  F  
Sbjct: 307 TFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKS 366

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL-CACNHAGLVAE 518
           +    +++W+ MI    QHG   EAL+ +  M E+GV+P+  T VSV+  +C +AGL  E
Sbjct: 367 MSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEE 426

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
           A  +F SM++  G++P   HY CM++ LG+AG+  +A  L+  MPF+ +   W + L   
Sbjct: 427 AHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANC 486

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           R + +++ G+ AA+    I+PE S+ +V L+ I+A AG +   +++R+ M D  ++K  G
Sbjct: 487 RSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAG 546

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            S I++   VY FT GD+S+ RSKEI+ +L  +   +  AGY P +    HDVE  +KE 
Sbjct: 547 RSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEP 606

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
           LL+ HSE+LA+AFG+I+T PG  +R+ KNLR+C DCHT  +  SKI  REIIVRD NRFH
Sbjct: 607 LLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFH 666

Query: 759 HFRNGSCSCGGYW 771
           HF+NGSCSC  +W
Sbjct: 667 HFKNGSCSCKDFW 679



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 247/492 (50%), Gaps = 41/492 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+++C     L  G ++H ++   G  SD +V+N LV+MY KCG+  ++R +F+A P ++
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
           V SW  L +        +EA+  F EM+  GI+P+  S ++ INAC+   + L  GR +H
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
               + G+   + +  +LV MY+K G+LE+++  F+ +  P+ VSWNA+IA    H    
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGL 219

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            AL+  Q+M           +   ++AC                      SD +VG  LV
Sbjct: 220 EALRTLQKM-----------FLEGIRAC----------------------SDVVVGTTLV 246

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           +MYAKC  + +A   F  + E N+I WN++IS ++Q+    EA  LF  M   G+  D+ 
Sbjct: 247 NMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEV 306

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY-IVNSLIDAYGKCGHVEDAVKIFKE 358
           T   +L +     A+   + +HA   +    S+   + N +++ YGKCG ++DA  +FK 
Sbjct: 307 TFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKS 366

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA-CANLSAYEQ 417
            S  D++A  +MI AY Q G   EAL+ Y  MQ+  + PD +   S+++A CAN    E+
Sbjct: 367 MSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEE 426

Query: 418 GKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
                V + +  G          +V    K G + DA+     +P +  +++W++ +   
Sbjct: 427 AHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANC 486

Query: 476 AQHG---RGKEA 484
             HG   RGK A
Sbjct: 487 RSHGDMKRGKLA 498



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 110/210 (52%), Gaps = 5/210 (2%)

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           +++++   Q G    A+    + +D ++      C  ++ +CA L A  +G+++H  + +
Sbjct: 7   STLLSKRQQLGQIAAAIDALQKRKDADLKE----CVRVIQSCARLGALAEGRRIHQLMRR 62

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
            G  SD +  N LV MY KCGS+++A   F   P + + SW+ +I   AQHGR +EAL +
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F +ML+ G+ P+ ++  + + AC+       A     ++ +++G Q        ++ +  
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGA 577
           + G  +E+M   ++M  + NA  W A++ A
Sbjct: 183 KCGSLEESMRTFESMT-EPNAVSWNAMIAA 211


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/679 (36%), Positives = 395/679 (58%), Gaps = 6/679 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A  S   L  GL VH   +  GF+S  +VA+SL+ MY KC    D+R++FDAI +++
Sbjct: 223 VLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKN 282

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++ WN++   Y    FL   +  F +M+  GI P+EF+ +S+++ CA      +GR++H 
Sbjct: 283 MIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHS 342

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK  + S++F  NAL+DMYAK G L++A   F+ + + D +SWNA+I G V  E    
Sbjct: 343 AIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAG 402

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF++M    I P+  +  S L AC  +++ E G+Q HC  +K+ ++++   G  L+D
Sbjct: 403 AFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLID 462

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH-LQNGGDMEAASLFPWMYREGVGFDQT 299
           MY+KCG + +A   +  MPE+++++ N +I+G+ L+N    E+ +L   M   G+   + 
Sbjct: 463 MYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN--TKESINLLHEMQILGLKPSEI 520

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFE-SDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           T ++++        + +  Q+H   VK       +++  SL+  Y     + DA  +F E
Sbjct: 521 TFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSE 580

Query: 359 -SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
            SS   +V  T++I+ + Q    + AL LY EM+D  I+PD     ++L ACA LS+   
Sbjct: 581 FSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHD 640

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAMIGGLA 476
           G+++H  I   GF  D    ++LV+MYAKCG +  + + F E+   + ++SW++MI G A
Sbjct: 641 GREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFA 700

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
           ++G  K AL++F +M +  + P+ +T + VL AC+HAG V E +  F+ M   +GI+P  
Sbjct: 701 KNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRV 760

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           +HYACM+D+LGR G  +EA E +D +  + NA +W  LLGA RI+ + + GQ AA+ L  
Sbjct: 761 DHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIE 820

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP+ SS +VLLSN+YA++G WD    +RR M    ++K PG SWI V  +   F  GD 
Sbjct: 821 LEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDI 880

Query: 657 SHARSKEIYAKLDEVSDLL 675
           SH+   EI   L  ++ L+
Sbjct: 881 SHSSYDEISKALKHLTALI 899



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 261/514 (50%), Gaps = 41/514 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA--IPE 58
            L AC   ++L LG  VH  V+ +G +S  F   +L+ +YAKC +   +R +F +   P 
Sbjct: 53  TLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPH 112

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              VSW +L S YV      EA+  F +M  S + P++ +L +++NA             
Sbjct: 113 LHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNA------------- 158

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSWNAVIAGCVLHE 176
                                 Y  +G L+DA  +F+ +  P  ++V+WN +I+G     
Sbjct: 159 ----------------------YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTA 196

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
           H + AL  F QM    +  +  T  S L A A +     G  +H   IK   +S   V  
Sbjct: 197 HYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVAS 256

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L++MY KC   D+AR +F  + +KN+I WN ++  + QNG       LF  M   G+  
Sbjct: 257 SLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHP 316

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           D+ T +++L + A F+ + V +Q+H+  +K  F S+ ++ N+LID Y K G +++A K F
Sbjct: 317 DEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHF 376

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           +  +  D ++  ++I  Y Q  +   A  L+  M    I PD    +S+L+AC N+   E
Sbjct: 377 EHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLE 436

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
            G+Q H   +K G  ++ FAG+SL++MY+KCG I DA + +S +P+R +VS +A+I G A
Sbjct: 437 AGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYA 496

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
                KE++ +  +M   G+ P+ IT  S++  C
Sbjct: 497 LKNT-KESINLLHEMQILGLKPSEITFASLIDVC 529



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 262/505 (51%), Gaps = 41/505 (8%)

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           E  + F+   + SG  P++F+ +  ++ACA   +  LGR +H   IK G +S  F   AL
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDI--VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           + +YAK  +L  A  +F     P +  VSW A+I+G V       AL +F +M++S +  
Sbjct: 89  IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-- 146

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
                                              D +  V +++ Y   G +D+A  +F
Sbjct: 147 ----------------------------------PDQVALVTVLNAYISLGKLDDACQLF 172

Query: 256 HLM--PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
             M  P +N++AWN++ISGH +     EA + F  M + GV   ++TL++VL ++AS  A
Sbjct: 173 QQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAA 232

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +     VHA ++K  FES  Y+ +SLI+ YGKC   +DA ++F   S  +++   +M+  
Sbjct: 233 LNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGV 292

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y+Q G     ++L+L+M    I+PD F  +S+L+ CA     E G+Q+H  IIK  F S+
Sbjct: 293 YSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSN 352

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F  N+L++MYAK G++ +A + F  +  R  +SW+A+I G  Q      A  +F +M+ 
Sbjct: 353 LFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMIL 412

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
           DG++P+ ++L S+L AC +   V EA   F  +  K G++      + +ID+  + G  +
Sbjct: 413 DGIVPDEVSLASILSACGNIK-VLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIK 471

Query: 554 EAMELVDTMPFQANASVWGALLGAA 578
           +A +   +MP ++  SV   + G A
Sbjct: 472 DAHKTYSSMPERSVVSVNALIAGYA 496



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 217/454 (47%), Gaps = 51/454 (11%)

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           WN  + G   H  ++  L+ +    +S  +P+ FT+   L ACA ++   LGR +H  +I
Sbjct: 16  WNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL--IAWNIVISGHLQNGGDMEA 282
           K  ++S       L+ +YAKC S+  AR IF   P  +L  ++W  +ISG++Q G   EA
Sbjct: 75  KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134

Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
             +F  M    V  DQ  L TVL                                   +A
Sbjct: 135 LHIFDKMRNSAVP-DQVALVTVL-----------------------------------NA 158

Query: 343 YGKCGHVEDAVKIFKESSAV--DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
           Y   G ++DA ++F++      ++VA   MI+ +A+    EEAL  + +M    +     
Sbjct: 159 YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRS 218

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             +S+L+A A+L+A   G  VH H IK GF S  +  +SL+NMY KC   DDA + F  I
Sbjct: 219 TLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAI 278

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAE 518
             + ++ W+AM+G  +Q+G     +++F  M+  G+ P+  T  S+L  CAC     V  
Sbjct: 279 SQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGR 338

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            + H   ++K+F       +   +ID+  +AG  +EA +  + M ++ + S W A++   
Sbjct: 339 -QLHSAIIKKRFTSNLFVNN--ALIDMYAKAGALKEAGKHFEHMTYRDHIS-WNAII-VG 393

Query: 579 RIYKNVEVGQHA---AEMLFAIEPEKSSTHVLLS 609
            + + VE G  +     +L  I P++ S   +LS
Sbjct: 394 YVQEEVEAGAFSLFRRMILDGIVPDEVSLASILS 427



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 24/257 (9%)

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
           E  L+ Y    +   +PD F  +  L+ACA L     G+ VH  +IK G  S +F   +L
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88

Query: 441 VNMYAKCGSIDDADRAFSE--IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +++YAKC S+  A   F+    P    VSW+A+I G  Q G   EAL +F +M  +  +P
Sbjct: 89  IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKM-RNSAVP 147

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA--GKFQEAM 556
           + + LV+VL A    G + +A   F+ M       P++   A  + I G A    ++EA+
Sbjct: 148 DQVALVTVLNAYISLGKLDDACQLFQQMPI-----PIRNVVAWNVMISGHAKTAHYEEAL 202

Query: 557 ELVDTMPFQAN-------ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL-- 607
                M            ASV  A+   A +   + V  HA +  F     +SS +V   
Sbjct: 203 AFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGF-----ESSIYVASS 257

Query: 608 LSNIYASAGMWDNVAKV 624
           L N+Y    M D+  +V
Sbjct: 258 LINMYGKCQMPDDARQV 274


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/645 (37%), Positives = 370/645 (57%), Gaps = 42/645 (6%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           D++S N L+  YAK+G +E+   VF  + + D VS+N +IA    + H+  ALK+  +M+
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                P  +++ +AL+AC+ +     G+Q+H  ++  ++  +  V   + DMYAKCG +D
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           +AR++F  M +KN+++WN++ISG+++ G   E   LF  M   G+  D  T+S VL    
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL---- 263

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
                                          +AY +CG V+DA  +F +    D +  T+
Sbjct: 264 -------------------------------NAYFRCGRVDDARNLFIKLPKKDEICWTT 292

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           MI  YAQ G  E+A  L+ +M  R + PDS+  SS++++CA L++   G+ VH  ++  G
Sbjct: 293 MIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMG 352

Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
             +     ++LV+MY KCG   DA   F  +P R +++W+AMI G AQ+G+  EAL ++ 
Sbjct: 353 IDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYE 412

Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           +M ++   P++IT V VL AC +A +V E + +F+S+ +  GI P  +HYACMI +LGR+
Sbjct: 413 RMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEH-GIAPTLDHYACMITLLGRS 471

Query: 550 GKFQEAMELVDTMPFQANASVWGALLG--AARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           G   +A++L+  MP + N  +W  LL   A    KN E+   AA  LF ++P  +  +++
Sbjct: 472 GSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAEL---AASHLFELDPRNAGPYIM 528

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           LSN+YA+ G W +VA VR  MK+   KK    SW+EV +KV+ F   D  H    +IY +
Sbjct: 529 LSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGE 588

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG-ATIRVKK 726
           L+ +  +L + GY P     LH+V E EK + + +HSEKLA+AF LI  P G A IR+ K
Sbjct: 589 LNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIK 648

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           N+R+C DCH   +F S  +SR II+RD NRFHHF  G CSC   W
Sbjct: 649 NIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 218/481 (45%), Gaps = 67/481 (13%)

Query: 29  DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM- 87
           D F+ N L+ +YAK G   D++ +FD + +R V SWN+L S Y     +E     F +M 
Sbjct: 57  DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMP 116

Query: 88  -------------------------VL-----SGIRPNEFSLSSMINACAGSGDSLLGRK 117
                                    VL      G +P ++S  + + AC+   D   G++
Sbjct: 117 YRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQ 176

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IHG  +      + F  NA+ DMYAK G+++ A  +F  +   ++VSWN +I+G V   +
Sbjct: 177 IHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGN 236

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            +  + LF +M+ S + P++ T ++ L A                               
Sbjct: 237 PNECIHLFNEMQLSGLKPDLVTVSNVLNA------------------------------- 265

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
               Y +CG +D+AR +F  +P+K+ I W  +I G+ QNG + +A  LF  M R  V  D
Sbjct: 266 ----YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPD 321

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T+S+++ S A   ++   + VH   V    ++   + ++L+D Y KCG   DA  IF+
Sbjct: 322 SYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFE 381

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                +++   +MI  YAQ G   EAL LY  MQ     PD+     +L+AC N    ++
Sbjct: 382 TMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKE 441

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
           G++    I + G          ++ +  + GS+D A      +P +     WS ++   A
Sbjct: 442 GQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA 501

Query: 477 Q 477
           +
Sbjct: 502 K 502



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 206/453 (45%), Gaps = 75/453 (16%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L+AC+   DL  G Q+HG +V      + FV N++  MYAKCG+   +R LFD + +++V
Sbjct: 162 LQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNV 221

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN + S YV      E +  F EM LSG++P+  ++S+++NA                
Sbjct: 222 VSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA---------------- 265

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
                              Y + G ++DA  +F  +   D + W  +I G   +   + A
Sbjct: 266 -------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDA 306

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
             LF  M    + P+ +T +S + +CA +     G+ +H  ++ M I +  +V   LVDM
Sbjct: 307 WMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDM 366

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y KCG   +AR+IF  MP +N+I WN +I G+ QNG  +EA +L+  M +E    D  T 
Sbjct: 367 YCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITF 426

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
             VL +            ++A  VK   E   Y                D++     +  
Sbjct: 427 VGVLSAC-----------INADMVK---EGQKYF---------------DSISEHGIAPT 457

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
           +D  AC  MIT   + G  ++A+ L   +Q     P+  + S+LL+ CA     +  +  
Sbjct: 458 LDHYAC--MITLLGRSGSVDKAVDL---IQGMPHEPNYRIWSTLLSVCAK-GDLKNAELA 511

Query: 422 HVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDD 452
             H+ +   +    AG    L N+YA CG   D
Sbjct: 512 ASHLFE---LDPRNAGPYIMLSNLYAACGRWKD 541



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 40/264 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ +C     L+ G  VHG VV  G D+   V+++LV MY KCG  +D+R +F+ +P R+
Sbjct: 328 MVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRN 387

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V++WN++   Y     + EA+  ++ M     +P+  +   +++AC  +     G+K   
Sbjct: 388 VITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFD 447

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              + G    +     ++ +  + G+++ AV + + + H                     
Sbjct: 448 SISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPH--------------------- 486

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS-LIKMEIK-SDPIVGVGL 238
                         PN   +++ L  CA  +LK    +L  S L +++ + + P   + L
Sbjct: 487 -------------EPNYRIWSTLLSVCAKGDLK--NAELAASHLFELDPRNAGPY--IML 529

Query: 239 VDMYAKCGSMDEARMIFHLMPEKN 262
            ++YA CG   +  ++  LM EKN
Sbjct: 530 SNLYAACGRWKDVAVVRSLMKEKN 553


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/563 (39%), Positives = 344/563 (61%), Gaps = 40/563 (7%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           ++  Y +    D AR +F  MPE++L +WN++++G+++N     A +LF  M       D
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER----D 56

Query: 298 QTTLSTVLKSVASFQAIGVCKQV-HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             + + +L   A    +   +++ + + +K          N L+ AY + G +EDA ++F
Sbjct: 57  IVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAKRLF 111

Query: 357 KES--------------------------SAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           +                               D ++ ++MI  Y+Q G  EEAL  ++EM
Sbjct: 112 ESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEM 171

Query: 391 QD--REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           Q     +N  SF C+  L+ C+N++A E G+Q+H  ++K G+ +  + GN+L+ MY KCG
Sbjct: 172 QRDCERLNRSSFTCA--LSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCG 229

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
           SID+A  AF EI ++ +VSW+ MI G A+HG G+EAL +F  M   G+ P+  T+VSVL 
Sbjct: 230 SIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLA 289

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+HAGLV +   +F SM + +GI     HY CM+D+LGRAG+ +EA  L+  MPF+ +A
Sbjct: 290 ACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDA 349

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
           + WGALLGA+RI+ N E+G+ AA+++F +EP  S  ++LLS +YA++G W +  K+R  M
Sbjct: 350 ATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEM 409

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           ++  +KK PG SW+EV++K++TF VGD SH  + +IY  L+E+   L + GY+       
Sbjct: 410 RNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVF 469

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           HDVEE EK  +L +HSEKLAVA+G++  P G  IRV KNLR+C DCH + ++ISKIV R 
Sbjct: 470 HDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRL 529

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           II+RD +RFH+F  GSCSC  +W
Sbjct: 530 IILRDNHRFHYFEGGSCSCRDFW 552



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 181/374 (48%), Gaps = 26/374 (6%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + D F  N ++  Y +  +   +R LF+ +PER +VSWN++ S Y    F++EA   F +
Sbjct: 23  ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYK 82

Query: 87  MVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           M L +GI  N    + + N        L   K+         D  + S N L+      G
Sbjct: 83  MPLKNGISWNGLLAAYVQNGRIEDAKRLFESKM---------DWTLVSWNCLMG-----G 128

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +     +F ++   D +SW+A+IAG   +  ++ AL  F +M+      N  ++T AL 
Sbjct: 129 FVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALS 188

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
            C+ +   ELGRQLHC L+K   ++   VG  L+ MY KCGS+DEAR  F  + EK++++
Sbjct: 189 TCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVS 248

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ----VH 321
           WN +I G+ ++G   EA ++F  M   G+  D  T+ +VL   A+    G+  Q     +
Sbjct: 249 WNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVL---AACSHAGLVDQGSEYFY 305

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK----ESSAVDLVACTSMITAYAQF 377
           +++      +       ++D  G+ G +E+A  + K    E  A    A       +   
Sbjct: 306 SMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNT 365

Query: 378 GLGEEALKLYLEMQ 391
            LGE+A ++  EM+
Sbjct: 366 ELGEKAAQIIFEME 379



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 184/386 (47%), Gaps = 39/386 (10%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           ++  Y +    + A  +F  +   D+ SWN ++ G V +     A  LF++M   +I   
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--- 57

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA----- 251
             ++ + L   A     +  R++     KM +K + I   GL+  Y + G +++A     
Sbjct: 58  -VSWNAMLSGYAQNGFVDEAREI---FYKMPLK-NGISWNGLLAAYVQNGRIEDAKRLFE 112

Query: 252 ---------------------RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
                                R +F  MP+++ I+W+ +I+G+ QNG   EA   F  M 
Sbjct: 113 SKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ 172

Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
           R+    ++++ +  L + ++  A+ + +Q+H   VK  +++  Y+ N+L+  Y KCG ++
Sbjct: 173 RDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSID 232

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
           +A   F+E    D+V+  +MI  YA+ G GEEAL ++  M+   I PD     S+L AC+
Sbjct: 233 EARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACS 292

Query: 411 NLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSW 468
           +    +QG +    + + +G  +       +V++  + G +++A      +P +    +W
Sbjct: 293 HAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATW 352

Query: 469 SAMIGGLAQHGR---GKEALQMFGQM 491
            A++G    HG    G++A Q+  +M
Sbjct: 353 GALLGASRIHGNTELGEKAAQIIFEM 378



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 5/212 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C++   L LG Q+H  +V  G+ +  +V N+L+ MY KCG+  ++R  F  I E+ V
Sbjct: 187 LSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDV 246

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
           VSWN++   Y    F EEA+  F+ M  +GIRP++ ++ S++ AC+ +G    G + + Y
Sbjct: 247 VSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSE-YFY 305

Query: 122 SIKLGY--DSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
           S+   Y   + +     +VD+  + G LE+A  + K++   PD  +W A++    +H + 
Sbjct: 306 SMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNT 365

Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
           +   K  Q +   E  N  M+   S L A +G
Sbjct: 366 ELGEKAAQIIFEMEPHNSGMYILLSKLYAASG 397


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/621 (38%), Positives = 350/621 (56%), Gaps = 47/621 (7%)

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           KS+ I   +F   ++LK           + +H +L+++ +  D  +   ++      G+ 
Sbjct: 8   KSAHIKIRLFQGFNSLKHL---------KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNT 58

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           + +  IFH   E N+  +N +I G + N    E+  ++  M +EG+  D  T   +LK+ 
Sbjct: 59  NYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKAC 118

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF------------ 356
           A      +  ++H L VK   ESD ++  SL+  YGKCG +++A K+F            
Sbjct: 119 ARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWT 178

Query: 357 -------------------KESSAV-------DLVACTSMITAYAQFGLGEEALKLYLEM 390
                              + + +V       D+V+ +SMI  YA  GL +EAL L+ +M
Sbjct: 179 AIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKM 238

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
            +    PD +    +L ACA L A E G      + +  F+ +   G +L++MYAKCG +
Sbjct: 239 LNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRM 298

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           D A   F  +  + IV W+A I GLA  G  K A  +FGQM + G+ P+  T V +LCAC
Sbjct: 299 DSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCAC 358

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
            HAGLV E + +F SME+ F + P  EHY CM+D+LGRAG   EA +LV +MP +ANA V
Sbjct: 359 THAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIV 418

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           WGALLG  R++++ ++ +   + L A+EP  S  +VLLSNIY+++  W++ AK+R  M +
Sbjct: 419 WGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSE 478

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             +KK PG SWIEV   V+ F VGD SH  S++IYAKL E+   L  +GYVP  +  L D
Sbjct: 479 RGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFD 538

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           +EE EKE  +  HSEKLA+AFGLI+T P   IRV KNLR+C DCH + + IS+   REII
Sbjct: 539 IEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREII 598

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           VRD NRFH F +GSCSC  YW
Sbjct: 599 VRDNNRFHCFNDGSCSCKDYW 619



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 182/403 (45%), Gaps = 40/403 (9%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + +H   ++LG D D +  N ++      GN   +  +F   + P+I  +N +I G VL+
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +    +++++  M+   ++P+ FT+   LKACA +   +LG +LH  ++K   +SD  V 
Sbjct: 87  DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL--------------------- 274
             LV +Y KCG +D A  +F  +PEKN+ AW  +ISG++                     
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206

Query: 275 -----------------QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
                             NG   EA  LF  M  EG   D   +  VL + A   A+ + 
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
                L  +  F  +  +  +LID Y KCG ++ A ++F+     D+V   + I+  A  
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326

Query: 378 GLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFA 436
           G  + A  L+ +M+   I PD      LL AC +    ++G+Q    + + F    +   
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
              +V++  + G +D+A +    +P +   + W A++GG   H
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLH 429



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 210/490 (42%), Gaps = 76/490 (15%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
            VH  ++  G D D ++ N ++      GN   S R+F    E ++  +N++    V  D
Sbjct: 28  HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
             +E++  +  M   G+ P+ F+   ++ ACA   DS LG K+HG  +K G +SD F   
Sbjct: 88  SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNT 147

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV----LHEHND------------ 179
           +LV +Y K G +++A  VF DI   ++ +W A+I+G +      E  D            
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207

Query: 180 -------W---------------ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
                  W               AL LF +M +    P+ +     L ACA +   ELG 
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGN 267

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
                + + E   +P++G  L+DMYAKCG MD A  +F  M +K+++ WN  ISG   +G
Sbjct: 268 WASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG 327

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
               A  LF  M + G+  D  T   +L           C   HA  V    E   Y  N
Sbjct: 328 HVKAAFGLFGQMEKSGIEPDGNTFVGLL-----------CACTHAGLVD---EGRQYF-N 372

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           S+              ++F  +  ++   C  M+    + G  +EA +L   M    +  
Sbjct: 373 SM-------------ERVFTLTPEIEHYGC--MVDLLGRAGFLDEAHQLVKSMP---MEA 414

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADR 455
           ++ V  +LL  C     +   + V   + +   +  + +GN   L N+Y+     +DA +
Sbjct: 415 NAIVWGALLGGC---RLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAK 471

Query: 456 AFSEIPDRGI 465
             S + +RGI
Sbjct: 472 IRSIMSERGI 481



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 149/312 (47%), Gaps = 40/312 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC    D  LG+++HG+VV  G +SD FV  SLV +Y KCG   ++ ++FD IPE++
Sbjct: 114 LLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKN 173

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFK----------------------------------- 85
           V +W ++ S Y+      EA+  F+                                   
Sbjct: 174 VAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALD 233

Query: 86  ---EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA 142
              +M+  G RP+ +++  ++ ACA  G   LG        +  +  +     AL+DMYA
Sbjct: 234 LFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYA 293

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
           K G ++ A  VF+ +   DIV WNA I+G  +  H   A  LF QM+ S I P+  T+  
Sbjct: 294 KCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVG 353

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMP-E 260
            L AC    L + GRQ   S+ ++   +  I   G +VD+  + G +DEA  +   MP E
Sbjct: 354 LLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME 413

Query: 261 KNLIAWNIVISG 272
            N I W  ++ G
Sbjct: 414 ANAIVWGALLGG 425


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/660 (36%), Positives = 383/660 (58%), Gaps = 7/660 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK C+   ++  G +VHG+    GFD D FV N+L+  Y  CG F D+ ++FD +PER 
Sbjct: 143 VLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERD 202

Query: 61  VVSWNSLFS-CYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLGRK 117
            VSWN++   C +H  F EEA+ FF+ MV +  GI+P+  ++ S++  CA + D ++ R 
Sbjct: 203 KVSWNTVIGLCSLH-GFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARI 261

Query: 118 IHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +H Y++K+G     +   NALVD+Y K G+ + +  VF +I+  +++SWNA+I       
Sbjct: 262 VHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRG 321

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               AL +F+ M    + PN  T +S L     + L +LG ++H   +KM I+SD  +  
Sbjct: 322 KYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISN 381

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L+DMYAK GS   A  IF+ M  +N+++WN +I+   +N  + EA  L   M  +G   
Sbjct: 382 SLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETP 441

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +  T + VL + A    + V K++HA  ++     D ++ N+L D Y KCG +  A  +F
Sbjct: 442 NNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF 501

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
              S  D V+   +I  Y++     E+L+L+ EM+   + PD      +++ACANL+   
Sbjct: 502 N-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIR 560

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           QGK++H  +++  F +  F  NSL+++Y +CG ID A + F  I ++ + SW+ MI G  
Sbjct: 561 QGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYG 620

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
             G    A+ +F  M EDGV  + ++ V+VL AC+H GL+ + + +F+ M     I+P  
Sbjct: 621 MRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMM-CDLNIEPTH 679

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
            HYACM+D+LGRAG  +EA +L+  +    + ++WGALLGA RI+ N+E+G  AAE LF 
Sbjct: 680 THYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFE 739

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           ++P+    ++LLSN+YA A  WD   KVR  MK    KK PG SW++V D V+ F VG++
Sbjct: 740 LKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLVGEK 799



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 176/565 (31%), Positives = 291/565 (51%), Gaps = 11/565 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFD--AIP 57
           +L+ CT    L    QVH   +  GF      +  SL++ YA  G+  +S  LF      
Sbjct: 40  LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAY 99

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            RS   WN+L          +     +  MV +G++P+E +   ++  C+   +   GR+
Sbjct: 100 SRSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +HG + KLG+D D+F  N L+  Y   G   DA+ VF ++   D VSWN VI  C LH  
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF 218

Query: 178 NDWALKLFQQMKSSE--INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-V 234
            + AL  F+ M +++  I P++ T  S L  CA  E K + R +HC  +K+ +    + V
Sbjct: 219 YEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKV 278

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVD+Y KCGS   ++ +F  + E+N+I+WN +I+     G  M+A  +F  M  EG+
Sbjct: 279 GNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGM 338

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             +  T+S++L  +       +  +VH  S+K A ESD +I NSLID Y K G    A  
Sbjct: 339 RPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIAST 398

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           IF +    ++V+  +MI  +A+  L  EA++L  +MQ +   P++   +++L ACA L  
Sbjct: 399 IFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGF 458

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              GK++H  II+ G   D F  N+L +MY+KCG ++ A   F+ I  R  VS++ +I G
Sbjct: 459 LNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIG 517

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ 533
            ++     E+L++F +M   G+ P+ ++ + V+ AC +   + + K  H   + K F   
Sbjct: 518 YSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTH 577

Query: 534 PMQEHYACMIDILGRAGKFQEAMEL 558
               +   ++D+  R G+   A ++
Sbjct: 578 LFVAN--SLLDLYTRCGRIDLATKV 600



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAF--SEI 460
           +LL  C       Q KQVH + +  GF+  + +   SL+  YA  G   ++   F  S  
Sbjct: 39  NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVA 98

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
             R    W+ +I   +  G   +    +  M+  GV P+  T   VL  C+    V + +
Sbjct: 99  YSRSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGR 157

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
                +  K G          ++   G  G F +AM++ D MP +   S W  ++G   +
Sbjct: 158 -EVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVS-WNTVIGLCSL 215

Query: 581 YKNVEVGQHAAEMLFAIEP 599
           +   E       ++ A +P
Sbjct: 216 HGFYEEALGFFRVMVAAKP 234


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 357/637 (56%), Gaps = 78/637 (12%)

Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           + L  M  K G L++A  +F  I  PD VS+N +++  V + + + A   F+ M      
Sbjct: 11  SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDM------ 64

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
                                            IK  P     ++  +A+   MD+AR +
Sbjct: 65  --------------------------------PIKDTPSWNT-MITGFAQNQQMDKARDL 91

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F +MP KN++ WN +ISG+++ G    A  LF     E   F         KSV ++ A 
Sbjct: 92  FLIMPTKNVVTWNAMISGYVECGDLDSALKLF-----EKAPF---------KSVVAWTA- 136

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
                                   +I  Y K G +  A ++F++    +LV   +MI  Y
Sbjct: 137 ------------------------MITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGY 172

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            +    E+ +KL+  M    I P+S   SS L  C+ LSA + G+QVH  + K     DT
Sbjct: 173 IENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDT 232

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
            AG SL++MY KCG ++D  + F ++P R +V+W+AMI G AQHG GK+AL +F +M+E 
Sbjct: 233 TAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEK 292

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G+ P+ IT V+VL ACNHAG       +F SM K +G+    +HY CM+D+LGRAGK  E
Sbjct: 293 GMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVE 352

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           A++L++ MPF+ +A+V+G LLGA RI+KN E+ + A++ L  ++P  ++ +V L+N+YA+
Sbjct: 353 AVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAA 412

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
              WD+VA+VR+ MK  K+ K PG SWIEVK   + F  GD+ H     I+ KL E+   
Sbjct: 413 TKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKK 472

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDC 734
           +  AGYVP +E  LHDV E +KEQLL  HSEKLA+A+GLI  PPG  IRV KNLR+C DC
Sbjct: 473 MKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDC 532

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H + ++IS+I  REIIVRD  RFHHF++G CSC  YW
Sbjct: 533 HRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 41/362 (11%)

Query: 36  LVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN 95
           L  M  K G   +++ LF  IPE   VS+N++ SCYV    +E A  FF++M +     +
Sbjct: 13  LAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIK----D 68

Query: 96  EFSLSSMINACAGSGDSLLGRK----------------IHGY--------SIKLGYDSDM 131
             S ++MI   A +      R                 I GY        ++KL ++   
Sbjct: 69  TPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKL-FEKAP 127

Query: 132 FSA----NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           F +     A++  Y K+G +  A  +F+ +   ++V+WNA+IAG + +   +  +KLF+ 
Sbjct: 128 FKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRT 187

Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
           M    I PN  T +SAL  C+ +   +LGRQ+H  + K  +  D   G  L+ MY KCG 
Sbjct: 188 MVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGV 247

Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
           +++   +F  +P ++++ WN +ISG+ Q+G   +A  LF  M  +G+  D  T   VL +
Sbjct: 248 LEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMA 307

Query: 308 V--ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI-----FKESS 360
              A F  +GV K  H+++      +       ++D  G+ G + +AV +     FK  +
Sbjct: 308 CNHAGFTDLGV-KYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHA 366

Query: 361 AV 362
           AV
Sbjct: 367 AV 368



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 1/229 (0%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
            +++  Y K G    + RLF+ +PE+++V+WN++ + Y+     E+ V  F+ MV  GI+
Sbjct: 135 TAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQ 194

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           PN  +LSS +  C+      LGR++H    K     D  +  +L+ MY K G LED   +
Sbjct: 195 PNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKL 254

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F  +   D+V+WNA+I+G   H     AL LF +M    + P+  T+ + L AC      
Sbjct: 255 FVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFT 314

Query: 214 ELGRQLHCSLIK-MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK 261
           +LG +   S+ K   + + P     +VD+  + G + EA  +   MP K
Sbjct: 315 DLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 2/182 (1%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C+    L LG QVH +V  +    D     SL+ MY KCG   D  +LF  +P R V
Sbjct: 204 LLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDV 263

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IHG 120
           V+WN++ S Y      ++A+  F EM+  G++P+  +  +++ AC  +G + LG K  H 
Sbjct: 264 VTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHS 323

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHND 179
            +   G  +       +VD+  + G L +AV + + +   P    +  ++  C +H++ +
Sbjct: 324 MAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTE 383

Query: 180 WA 181
            A
Sbjct: 384 MA 385


>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 765

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/667 (36%), Positives = 378/667 (56%), Gaps = 16/667 (2%)

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           IH + +K G   D F ++ LV +YAK G +E A  VF  +   + V+W  ++ G V +  
Sbjct: 95  IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 154

Query: 178 NDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
              A+ LF++M   SE  P+ +T   AL AC  +   +LG QLH  +IK  +  D  +G 
Sbjct: 155 PKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGN 214

Query: 237 GLVDMYAKCGSMDEARMI-FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
            L  +Y KCG   E  +  F  + EK++I+W   IS   + G  M+   +F  M  + V 
Sbjct: 215 ALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQ 274

Query: 296 F--DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              ++ TL++ L      + + +  QVHAL  K  +ES+  + NSL+  Y KCG + +A 
Sbjct: 275 VQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQ 334

Query: 354 KIFKESSAVDLVACTSMITAYAQ-----------FGLGEEALKLYLEMQDREINPDSFVC 402
           ++FK  + V+LV   +MI  +AQ           +  G EAL L+ ++    + PD F  
Sbjct: 335 RLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTF 394

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           SS+L+ C+ + A EQG+Q+H   IK GF+SD   G+S++NMY KCGSI+ A + F E+  
Sbjct: 395 SSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSI 454

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           R ++ W+ MI G AQHG  K+AL +F  M   G+ PN +T V VL AC  AG+V EA ++
Sbjct: 455 RTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNY 514

Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYK 582
           FE M+K++ I+P+ +HY C++D+L R G+ QEA +L+  M ++A+  +W  L+       
Sbjct: 515 FEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQG 574

Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
           N+E+G  AAE L +++P+ + T+ LL N Y SAG +D+V++V   M++ K+ +    SWI
Sbjct: 575 NLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWI 634

Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
            +KD+VY+F   D++   S  I   L+++       GY  +   +  D E+ +      +
Sbjct: 635 SIKDRVYSFQTNDKADIES-SIGKSLEDLHIKAKNLGYEMLEYVEKSDKEKEKTSSPTIY 693

Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
           HSEKLA+ FGL   P  + +RV KN  +C D H   ++IS + SREIIV+D  R H F N
Sbjct: 694 HSEKLAITFGLENLPNSSPVRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRLHKFVN 753

Query: 763 GSCSCGG 769
           G CSCG 
Sbjct: 754 GQCSCGN 760



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 223/410 (54%), Gaps = 15/410 (3%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  +V TG   D F+++ LV +YAKCG    ++++FD +  R+ V+W +L   YV    
Sbjct: 95  IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 154

Query: 77  LEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
            + A+  F+EM+L S   P+ ++L+  +NAC       LG ++H Y IK   D D    N
Sbjct: 155 PKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGN 214

Query: 136 ALVDMYAKV-GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE-- 192
           AL  +Y K  G LE  +  F+ I+  D++SW A I+ C         +++F +M   E  
Sbjct: 215 ALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQ 274

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           + PN +T TSAL  C  ++  ELG Q+H    K+  +S+  V   L+ +Y KCG + EA+
Sbjct: 275 VQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQ 334

Query: 253 MIFHLMPEKNLIAWNIVISGHLQ-----------NGGDMEAASLFPWMYREGVGFDQTTL 301
            +F  M + NL+ WN +I+GH Q               +EA +LF  + R G+  D  T 
Sbjct: 335 RLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTF 394

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           S+VL   +   A+   +Q+HA ++KT F SD  + +S+I+ Y KCG +E A K+F E S 
Sbjct: 395 SSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSI 454

Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
             ++  T+MIT +AQ G  ++AL L+ +M+   I P+      +L+AC +
Sbjct: 455 RTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGS 504



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 213/468 (45%), Gaps = 48/468 (10%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFID-SRRLFDAIPERS 60
           L ACTS   L LG Q+H  ++    D D  + N+L  +Y KCG  ++     F  I E+ 
Sbjct: 182 LNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKD 241

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS--GIRPNEFSLSSMINACAGSGDSLLGRKI 118
           V+SW +  S         + V  F EM+L    ++PNE++L+S ++ C       LG ++
Sbjct: 242 VISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQV 301

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG------- 171
           H    KLGY+S++   N+L+ +Y K G + +A  +FK +   ++V+WNA+IAG       
Sbjct: 302 HALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMEL 361

Query: 172 ----CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
                  ++    AL LF ++  S + P+ FT++S L  C+ M   E G Q+H   IK  
Sbjct: 362 SKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTG 421

Query: 228 IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
             SD +VG  +++MY KCGS++ A  +F  M  + +I W  +I+G  Q+G   +A +LF 
Sbjct: 422 FLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFE 481

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M   G+  +  T   VL +  S           A  V  AF                  
Sbjct: 482 DMKLVGIRPNLVTFVGVLSACGS-----------AGMVNEAF-----------------N 513

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
           + E   K +K    +D   C  ++    + G  +EA  L  +M   +     F+ S+L+ 
Sbjct: 514 YFEIMQKEYKIKPVMDHYVC--LVDMLVRLGQVQEAFDLIKKM---DYKASEFIWSNLIV 568

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            C +    E G      ++      DT     L+N Y   G  DD  R
Sbjct: 569 GCLSQGNLELGCDAAEKLLSLK-PKDTETYKLLLNAYVSAGRYDDVSR 615



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 6/312 (1%)

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           IS HL    +++    F          D +    +L+      +    + +H   VKT  
Sbjct: 45  ISTHLDPNRNLKFQEAFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGS 104

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             D ++ + L+  Y KCG +E A ++F   +  + VA T+++  Y Q  + + A+ L+ E
Sbjct: 105 HEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEE 164

Query: 390 M-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC- 447
           M    E  P ++  +  LNAC +L + + G+Q+H +IIK+    DT  GN+L ++Y KC 
Sbjct: 165 MLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCG 224

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED--GVLPNHITLVS 505
           G ++    AF  I ++ ++SW+A I    + G   + +++F +ML D   V PN  TL S
Sbjct: 225 GKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTS 284

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
            L  C     + E      ++  K G +        ++ +  + G   EA  L   M   
Sbjct: 285 ALSQCCEVKCL-ELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-D 342

Query: 566 ANASVWGALLGA 577
            N   W A++  
Sbjct: 343 VNLVTWNAMIAG 354



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C+    L  G Q+H   + TGF SD  V +S++ MY KCG+   + ++F  +  R+
Sbjct: 397 VLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRT 456

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG---DSLLGRK 117
           ++ W ++ + +    + ++A+  F++M L GIRPN  +   +++AC  +G   ++    +
Sbjct: 457 MILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFE 516

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP-DIVSWNAVIAGCV 173
           I     K+    D +    LVDM  ++G +++A  + K +++      W+ +I GC+
Sbjct: 517 IMQKEYKIKPVMDHYV--CLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCL 571


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/556 (40%), Positives = 343/556 (61%), Gaps = 1/556 (0%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G QLH  ++K  +++ P+V   L+++Y+K      +  +F   P+K+   W+ VIS   Q
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N   + A   F  M  +GV  D     +  K+    +   V K VH L+VKT +  D ++
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +SL+D Y KCG + DA  +F E    ++V+ + MI  YAQ   G EAL L+ +    ++
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           + + F  SS++  C++ +  E GK +H   +K  F S +F G++L+++Y+KCG I+ A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F EIP R +  W++M+   AQH   +    +F +M   G+ PN I+ +SVL AC+HAGL
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGL 343

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V + + +F S+ + +GI+P  EHYA ++D+LGRAGK QEA+ ++  MP +   SVWGALL
Sbjct: 344 VEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
              RI+K+ E+    A+ +  ++   S  HVLLSN YA+AG ++  A++R+ ++D  +KK
Sbjct: 403 TGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKK 462

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G+SW+E  +KV+TFT GDRSHA+  EIY KL+E+ + + KAGYV      L  V+  E
Sbjct: 463 ETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEE 522

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K + + +HSE+LA+AFGLI  PPG  IRV KNLR+C DCH + +F+SK   R +IVRD N
Sbjct: 523 KNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNN 582

Query: 756 RFHHFRNGSCSCGGYW 771
           RFH F +G CSCG YW
Sbjct: 583 RFHRFEDGKCSCGDYW 598



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 200/380 (52%), Gaps = 1/380 (0%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H + +K G  +    ++ L+++Y+K      ++ VF +       +W++VI+    
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +E    AL+ F++M +  + P+   Y SA KAC  +   ++G+ +HC  +K     D  V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVDMYAKCG + +AR +F  MPE+N+++W+ +I G+ Q    +EA +LF     E V
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             +  T S+V++  +S   + + K +H L +K +F+S  ++ ++LI  Y KCG +E A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E    +L    SM+ A AQ    +    L+ EM +  + P+     S+L AC++   
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGL 343

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIG 473
            E+G++    +  +G   +T    SLV++  + G + +A     ++P R   S W A++ 
Sbjct: 344 VEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLT 403

Query: 474 GLAQHGRGKEALQMFGQMLE 493
           G   H   + A  +  ++LE
Sbjct: 404 GCRIHKDTEMAAFVADRILE 423



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 189/358 (52%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L + T  + L  GLQ+H  ++  G  +   V+++L+ +Y+K    + S ++FD  P++S
Sbjct: 31  LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W+S+ S +   +    A+ FF+ M+  G+RP++    S   AC     S +G+ +H 
Sbjct: 91  STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K GY  D+F  ++LVDMYAK G + DA  +F ++   ++VSW+ +I G    +    
Sbjct: 151 LAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE 210

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF+Q    +++ N FT++S ++ C+     ELG+ +H   +KM   S   VG  L+ 
Sbjct: 211 ALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALIS 270

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+KCG ++ A  +F  +P +NL  WN ++    Q+        LF  M   G+  +  +
Sbjct: 271 LYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIS 330

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +VL + +    +   ++  +L      E +     SL+D  G+ G +++AV + K+
Sbjct: 331 FLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQ 388



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 1/271 (0%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           KAC   +   +G  VH + V TG+  D FV +SLV MYAKCG   D+R LFD +PER+VV
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV 193

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           SW+ +   Y   D   EA+  FK+ ++  +  N+F+ SS+I  C+ S    LG+ IHG  
Sbjct: 194 SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLC 253

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           +K+ +DS  F  +AL+ +Y+K G +E A  VF +I   ++  WN+++  C  H H     
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVF 313

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
            LF++M +  + PN  ++ S L AC+   L E GR+    +    I+ +      LVD+ 
Sbjct: 314 GLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLL 373

Query: 243 AKCGSMDEARMIFHLMPEKNLIA-WNIVISG 272
            + G + EA  +   MP +   + W  +++G
Sbjct: 374 GRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ C+S   L LG  +HG+ +   FDS  FV ++L+ +Y+KCG    + ++FD IP R+
Sbjct: 233 VIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRN 292

Query: 61  VVSWNS-LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +  WNS L +C  H    +     F+EM   G++PN  S  S++ AC+ +G    GR+  
Sbjct: 293 LGLWNSMLIACAQHAH-TQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 351

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
                 G + +     +LVD+  + G L++AV+V K +   P    W A++ GC +H+  
Sbjct: 352 SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDT 411

Query: 179 DWA 181
           + A
Sbjct: 412 EMA 414



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 22/204 (10%)

Query: 395 INPDSF------VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +N +SF      +C+ LL+   + S   QG Q+H HI+KFG  +     ++L+N+Y+K  
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRS-LRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQ 74

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
               + + F E P +   +WS++I   AQ+     ALQ F +ML DGV P+     S   
Sbjct: 75  LPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATK 134

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-------MIDILGRAGKFQEAMELVDT 561
           AC   G +  +      + K      ++  Y C       ++D+  + G+  +A  L D 
Sbjct: 135 AC---GFLRRS-----DVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDE 186

Query: 562 MPFQANASVWGALLGAARIYKNVE 585
           MP +   S  G + G A++   VE
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVE 210


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/689 (36%), Positives = 393/689 (57%), Gaps = 16/689 (2%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           ++ ++ A A S     G ++HG   K+G+ SD    N L+DMY K G L+ A  VF  + 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGR 217
             ++VSW A++ G + H      L+L  +M++ SE  PN +T +++LKAC  +     G 
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA-WNIVISGHLQN 276
            +H   ++   +   +V   LV +Y+K G + +AR +F      + IA WN ++SG+   
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186

Query: 277 GGDMEAASLFPWMYR-EGV-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE--SD 332
           G   +A  +F  M R EG    D+ T +++LK+ +   A     QVHA    + F   S+
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             +  +L+D Y KC  +  A+++F+     +++  T+++  +AQ G   EAL+L+     
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
               PDS V SS++   A+ +  EQG+QVH + IK    +D  AGNS+V+MY KCG  D+
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDE 366

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A+R F E+    +VSW+ M+ GL +HG G+EA+ +F +M   GV P+ +T +++L AC+H
Sbjct: 367 AERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSH 426

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           AGLV E + +F  + +   ++P  EHYACM+D+LGRAG+ +EA +L+ TMP +    VW 
Sbjct: 427 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 486

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
            LL A R++K+V VG+ A ++L A++ +    +V LSN+ A AG W    KVR  M+   
Sbjct: 487 TLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRG 546

Query: 633 LKKEPGMSWIEVKDKVYTFTVG---DRSHARSKEIYAKL-DEVSDLLNKAGY-VPMVETD 687
           LKK+ G SW+EV  +V+ F  G   + +H ++ +I   L D  + +  + GY        
Sbjct: 547 LKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFA 606

Query: 688 LHDVEESEKEQLLYHHSEKLAVAF-----GLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
           LHDV+E  + + L  HSE+LAV       G+     G  IRV KNLR+C DCH  F+ +S
Sbjct: 607 LHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLS 666

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            +V R ++VRD NRFH F +GSCSC  YW
Sbjct: 667 AVVRRALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 265/521 (50%), Gaps = 18/521 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+A      L  G+Q+HG +   GF SD  + N+L+ MY KCG    +  +F  + +R+
Sbjct: 10  LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VVSW +L   ++        +    EM   S   PNE++LS+ + AC   GD+  G  IH
Sbjct: 70  VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIH 129

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
           G  ++ GY      A++LV +Y+K G + DA  VF        I +WNA+++G     H 
Sbjct: 130 GLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHG 189

Query: 179 DWALKLFQQMKSSEI--NPNMFTYTSALKACAGMELKELGRQLHCSLIK--MEIKSDPIV 234
             AL +F++M+  E    P+ FT+ S LKAC+G+     G Q+H ++        S+ I+
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAIL 249

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              LVDMY KC  +  A  +F  +  KN+I W  V+ GH Q G   EA  LF   +R G 
Sbjct: 250 AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGA 309

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   LS+V+  +A F  +   +QVH   +K    +D    NS++D Y KCG  ++A +
Sbjct: 310 RPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAER 369

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F+E  A ++V+ T+M+    + GLG EA+ L+ EM+   + PD     +LL+AC++   
Sbjct: 370 MFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGL 429

Query: 415 YEQGKQVHVHIIKFGFM---SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSA 470
            ++ ++    I +   +   ++ +A   +V++  + G + +A      +P    V  W  
Sbjct: 430 VDECRRYFSCIRRDRTVRPKAEHYA--CMVDLLGRAGELREARDLIRTMPMEPTVGVWQT 487

Query: 471 MIGGLAQH---GRGKEALQMFGQMLEDGVLP-NHITLVSVL 507
           ++     H     G+EA  +   M  DG  P N++TL +VL
Sbjct: 488 LLSACRVHKDVAVGREAGDVLLAM--DGDNPVNYVTLSNVL 526



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 6/283 (2%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q  ++ +L++ A   ++    Q+H    K  F SD  + N+LID Y KCG ++ A ++F 
Sbjct: 4   QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYE 416
                ++V+ T+++  + + G     L+L  EM+   E  P+ +  S+ L AC  +    
Sbjct: 64  GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
            G  +H   ++ G+       +SLV +Y+K G I DA R F       GI +W+AM+ G 
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGY 183

Query: 476 AQHGRGKEALQMFGQML--EDGVLPNHITLVSVLCACNHAGLVAE-AKHHFESMEKKFGI 532
           A  G G++AL +F +M   E    P+  T  S+L AC+  G   E A+ H       F  
Sbjct: 184 AHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 243

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                    ++D+  +  +   AM++ + +  + N   W A++
Sbjct: 244 ASNAILAGALVDMYVKCRRLPVAMQVFERLE-RKNVIQWTAVV 285


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/698 (34%), Positives = 396/698 (56%), Gaps = 4/698 (0%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++KAC + K+ F G+  +   V   G D +EFVA+SL+  Y + G      +LFD + ++
Sbjct: 144 LVKACVALKN-FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V WN + + Y  C  L+  +  F  M +  I PN  +   +++ CA      LG ++H
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +  G D +    N+L+ MY+K G  +DA  +F+ +   D V+WN +I+G V     +
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            +L  F +M SS + P+  T++S L + +  E  E  +Q+HC +++  I  D  +   L+
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D Y KC  +  A+ IF      +++ +  +ISG+L NG  +++  +F W+ +  +  ++ 
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL ++L  +    A+ + +++H   +K  F++   I  ++ID Y KCG +  A +IF+  
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S  D+V+  SMIT  AQ      A+ ++ +M    I  D    S+ L+ACANL +   GK
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H  +IK    SD ++ ++L++MYAKCG++  A   F  + ++ IVSW+++I     HG
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622

Query: 480 RGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           + K++L +F +M+E  G+ P+ IT + ++ +C H G V E    F SM + +GIQP QEH
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC++D+ GRAG+  EA E V +MPF  +A VWG LLGA R++KNVE+ + A+  L  ++
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLD 742

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S  +VL+SN +A+A  W++V KVR  MK+ +++K PG SWIE+  + + F  GD +H
Sbjct: 743 PSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNH 802

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
             S  IY+ L+ +   L   GY+P     LH  E S K
Sbjct: 803 PESSHIYSLLNSLLGELRLEGYIPQPYLPLHP-ESSRK 839



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 176/587 (29%), Positives = 301/587 (51%), Gaps = 20/587 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           +L+AC++   L  G QVH  ++      D +    ++ MYA CG+F D  ++F  +  R 
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 60  -SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG----SGDSLL 114
            S+  WNS+ S +V    L +A+ F+ +M+  G+ P+  +   ++ AC       G   L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
              +      LG D + F A++L+  Y + G ++    +F  +   D V WN ++ G   
Sbjct: 161 SDTVSS----LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
               D  +K F  M+  +I+PN  T+   L  CA   L +LG QLH  ++   +  +  +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY+KCG  D+A  +F +M   + + WN +ISG++Q+G   E+ + F  M   GV
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T S++L SV+ F+ +  CKQ+H   ++ +   D ++ ++LIDAY KC  V  A  
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           IF + ++VD+V  T+MI+ Y   GL  ++L+++  +   +I+P+     S+L     L A
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            + G+++H  IIK GF +    G ++++MYAKCG ++ A   F  +  R IVSW++MI  
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE----AKHHFESMEKKF 530
            AQ      A+ +F QM   G+  + +++ + L AC  A L +E    A H F     K 
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSESFGKAIHGF---MIKH 571

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +       + +ID+  + G  + AM +  TM  + N   W +++ A
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAA 617



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 211/434 (48%), Gaps = 16/434 (3%)

Query: 76  FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
           FLEE +            P   SL  ++ AC+       G+++H + I      D ++  
Sbjct: 29  FLEETI------------PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74

Query: 136 ALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            ++ MYA  G+  D   +F   D+    I  WN++I+  V +   + AL  + +M    +
Sbjct: 75  RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
           +P++ T+   +KAC  ++  +    L  ++  + +  +  V   L+  Y + G +D    
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  + +K+ + WN++++G+ + G        F  M  + +  +  T   VL   AS   
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           I +  Q+H L V +  + +  I NSL+  Y KCG  +DA K+F+  S  D V    MI+ 
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           Y Q GL EE+L  + EM    + PD+   SSLL + +     E  KQ+H +I++     D
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
            F  ++L++ Y KC  +  A   FS+     +V ++AMI G   +G   ++L+MF  +++
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434

Query: 494 DGVLPNHITLVSVL 507
             + PN ITLVS+L
Sbjct: 435 VKISPNEITLVSIL 448



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 10/282 (3%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---- 356
           LS +L++ ++   +   KQVHA  +  +   D Y    ++  Y  CG   D  K+F    
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97

Query: 357 -KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            + SS   +    S+I+++ + GL  +AL  Y +M    ++PD      L+ AC  L  +
Sbjct: 98  LRRSS---IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           +    +   +   G   + F  +SL+  Y + G ID   + F  +  +  V W+ M+ G 
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           A+ G     ++ F  M  D + PN +T   VL  C  + L+ +       +    G+   
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC-ASKLLIDLGVQLHGLVVVSGVDFE 273

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                 ++ +  + G+F +A +L   M  +A+   W  ++  
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/667 (36%), Positives = 372/667 (55%), Gaps = 29/667 (4%)

Query: 130  DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA-------- 181
            D F    L+  Y   G  E+AV+++ ++ + D    +  +   VL   + +         
Sbjct: 410  DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKN 469

Query: 182  ------LKLFQQMKSSEINPNMFTYTSALKACA---GMELKELGR-----QLHCSLIKME 227
                  L +F QM S  + P+  T  S  +AC+    + L  LGR      +H  +I+  
Sbjct: 470  GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRA 529

Query: 228  IKSDP---IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
            +  DP    +G  L+++YA  G++ +   +F  + EK +++WN +IS   +NG   EA  
Sbjct: 530  M--DPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 587

Query: 285  LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            LF  M  +G+  D  +L++ L +  +     +  Q+H   +KT    +D++ N+LID Y 
Sbjct: 588  LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYA 646

Query: 345  KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
            KCG V  A K+F++     LV   SMI  ++Q G   EA+ L+ +M    +  D     S
Sbjct: 647  KCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 706

Query: 405  LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
            ++ AC++L   E+GK VH  +I +G   D++   +L +MY+KCG +  A   F  + +R 
Sbjct: 707  VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS 766

Query: 465  IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
            IVSWS MI G   HG+    + +F QML  G+ PN IT + +L AC+HAG V E K +F 
Sbjct: 767  IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN 826

Query: 525  SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
            SM + FG++P  +H+ACM+D+L RAG    A +++ ++PF AN+S+WGALL   RI+K +
Sbjct: 827  SMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRI 885

Query: 585  EVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEV 644
            ++ +   + L  ++   +  + LLSNIYA  G WD   KVR  MK   L+K PG S IE+
Sbjct: 886  DIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEI 945

Query: 645  KDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHS 704
              K+Y F  GD SH+++K+IY  L+    L++   Y    +  +    +  KE  +  HS
Sbjct: 946  DKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHS 1005

Query: 705  EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
            EKLA+AFG+I T PG T+R+ KNLR+C DCH+  +  SKI  REII+RD+NRFH FRNGS
Sbjct: 1006 EKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGS 1065

Query: 765  CSCGGYW 771
            CSC  YW
Sbjct: 1066 CSCNDYW 1072



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 244/535 (45%), Gaps = 63/535 (11%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           K C +   L    Q+H  +  TG       +  L+  YA+ G F  S+R+FD  P+    
Sbjct: 356 KRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSF 412

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVL--------------------------------- 89
            W  L  CYV   F EEAV  + EMV                                  
Sbjct: 413 MWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQA 472

Query: 90  ------------SGIRPNEFSLSSMINACAGSGDSLL--------GRKIHGYSIKLGYDS 129
                         + P+  ++ S+  AC+  G   L        GR +HG+ I+   D 
Sbjct: 473 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDP 532

Query: 130 DM-FSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           ++ F   AL+++YA  GNL D   VF+ I+   I+SWN +I+    +   + AL LF QM
Sbjct: 533 ELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM 592

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           ++  + P+ ++  S+L AC  +   +LG Q+H  +IK    +D  V   L+DMYAKCG +
Sbjct: 593 QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFV 651

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
             A  +F  + EK+L+ WN +I G  QNG  +EA +LF  MY   V  D+ T  +V+++ 
Sbjct: 652 HSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQAC 711

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
           +    +   K VH   +      D Y+  +L D Y KCG ++ A  +F   S   +V+ +
Sbjct: 712 SHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWS 771

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
            MI  Y   G     + L+ +M    I P+      +L+AC++  A E+GK     + +F
Sbjct: 772 VMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEF 831

Query: 429 GFMS--DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGR 480
           G     D FA   +V++ ++ G ++ A +  + +P     S W A++ G   H R
Sbjct: 832 GVEPKHDHFA--CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKR 884



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 202/420 (48%), Gaps = 69/420 (16%)

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           QLH  L    +   P     L++ YA+ G  + ++ +F   P+ +   W ++I  ++  G
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425

Query: 278 GDMEAASLFPWMYREGVGFDQTTLS-----TVLKSVASFQAIGV---------------- 316
              EA SL    Y E V  DQT +S     +VLK+ + F  + V                
Sbjct: 426 FFEEAVSL----YHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQ 481

Query: 317 -------------------CKQ-----------------VHALSVKTAFESD-DYIVNSL 339
                              C +                 VH   ++ A + + D++  +L
Sbjct: 482 MISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPAL 541

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           ++ Y   G++ D  K+F+      +++  ++I+ + + G  EEAL L+++MQ + + PDS
Sbjct: 542 MELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDS 601

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
           +  +S L+AC  +S  + G Q+H +IIK G  +D F  N+L++MYAKCG +  A++ F +
Sbjct: 602 YSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEK 660

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
           I ++ +V+W++MI G +Q+G   EA+ +F QM  + V  + +T +SV+ AC+H G + + 
Sbjct: 661 IKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG 720

Query: 520 K--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           K  HH   M   +G++        + D+  + G+ Q A  + D M  ++  S W  ++  
Sbjct: 721 KWVHHKLIM---YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAG 776



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 1/180 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++AC+    L  G  VH  ++  G   D ++  +L  MY+KCG    +  +FD + ERS
Sbjct: 707 VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS 766

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW+ + + Y     +   +  F +M+ SGI+PN+ +   +++AC+ +G    G+    
Sbjct: 767 IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN 826

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS-WNAVIAGCVLHEHND 179
              + G +        +VD+ ++ G+L  A  +   +  P   S W A++ GC +H+  D
Sbjct: 827 SMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRID 886


>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
 gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
          Length = 760

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/760 (33%), Positives = 406/760 (53%), Gaps = 9/760 (1%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEA 80
           ++  G+    F++N+L+  Y +C +   +R LFD +P R VV+WN+L + Y        A
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60

Query: 81  VCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
           +  F++    G +  + F+ ++++ AC G+GD   GR  HG ++  G     F +N+++D
Sbjct: 61  LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVID 120

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MYAK   +++    F   E  D VSWN +++  V     + A  +   M  S +  + F 
Sbjct: 121 MYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFA 180

Query: 200 YTSALKACAGMELKE-LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
               LKAC+ +E  E + R LH  +IK+ +  D  VG  +VDMYAK G ++EA  +F  +
Sbjct: 181 LGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSI 240

Query: 259 PEKNLIAWNIVISGHLQNGGD------MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
           P +N++ +N +I+G  + G D      MEA  ++  M+R  +   + T  +VL+      
Sbjct: 241 PSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTN 300

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+   +Q+HA  +   FE D++I N+LI+ Y K   V+D+++ F  +   ++   TSMIT
Sbjct: 301 AVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMIT 360

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
           A+ +    ++AL L+  ++   + PD F  SS++NACA+LS     +Q+H + +K GF  
Sbjct: 361 AFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDR 420

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
            T  GNS + MY   G +  A + F  IP     SWS MI   A HG  +EAL +F +M 
Sbjct: 421 FTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMR 480

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           +  V+ N    ++VL AC+H GL+ E   H+ESM   +   P  +H ACM+D+LG  GK 
Sbjct: 481 DCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKV 540

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
            +A + +++   + ++ +W  LL A RI+ + + G    E L  +EP  +S++V+L N+Y
Sbjct: 541 ADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYVMLYNLY 600

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE-V 671
             AG      + R  M++  + KE G+SW E       F  GD S ++    + +L+E +
Sbjct: 601 MDAGKISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHFVDGDNSCSQKDATFTRLEELL 660

Query: 672 SDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRIC 731
             +  K     M   +L        E  +  H E LAVA GL   P  A +RV KN R+ 
Sbjct: 661 VRVKQKTERSSMNVWELGFQNRKVSENSIGKHGELLAVALGLSTLPNTAPVRVMKNQRMS 720

Query: 732 VDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + H + + +S+  +REII+RD  RFHHF  GSCSC GYW
Sbjct: 721 WEGHETLKLLSESENREIIIRDPTRFHHFSQGSCSCRGYW 760



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 243/488 (49%), Gaps = 9/488 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    D   G   HG+ V +G     FV+NS++ MYAKC    + R  FD   ER 
Sbjct: 83  VLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDMYAKCRMIDEVRLAFDRAEERD 142

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIH 119
            VSWN L S YV   + E A      M  SG+  + F+L  ++ AC+   DS  + R +H
Sbjct: 143 EVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFALGGILKACSELEDSEDVRRMLH 202

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------ 173
           G  IK+G D D+F  + +VDMYAK G LE+A+ VF  I   ++V +N +IAG        
Sbjct: 203 GCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIYNTMIAGFARLGNDP 262

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
             E    A++++  M    I P+ FT+ S L+ C         RQ+H  +I    + D  
Sbjct: 263 CPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEF 322

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           +G  L+++Y+K   +D++   FH  P++ +  W  +I+  ++N    +A +LF  +   G
Sbjct: 323 IGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTG 382

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           V  DQ T+S+V+ + A       C+Q+H  +VK+ F+      NS I+ Y   G ++ A 
Sbjct: 383 VEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAK 442

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           K F+   ++D  + + MI +YA  G   EAL L+ +M+D  +  + F   ++L AC++  
Sbjct: 443 KTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQG 502

Query: 414 AYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA-DRAFSEIPDRGIVSWSAM 471
             ++G +     +  + F+ D      +V++    G + DA D   S   +   V W  +
Sbjct: 503 LIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAEDFINSSGLENDSVLWHTL 562

Query: 472 IGGLAQHG 479
           +     HG
Sbjct: 563 LRACRIHG 570


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/657 (33%), Positives = 376/657 (57%), Gaps = 1/657 (0%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+   + S ++ C   G   LGR+ H + +K+G  SD F   +L+DMYAK G ++ AV V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           +  +   D  + N +I+    +     A ++F Q+ +    PN +TY++ L  C  +   
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
           + G+QLH  ++KM+  S+  VG  L+ +Y+KCG M+EA ++F  + ++N+I+W   I+G 
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGF 290

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            Q+G   +A   F  M   G+  ++ T S VL S    +     +  H   +K    S  
Sbjct: 291 YQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGV 350

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
           ++  ++ID Y   G +++A K FK+   A   V+  ++I  Y      E+A++ +  M  
Sbjct: 351 FVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
            ++  + F  S++  AC++  +     Q+H  +IK    S+    +SL+  Y +CGS+++
Sbjct: 411 EDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLEN 470

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A + F++I D  +VSW+++I   +Q+G   +A+ +  +M+E+G  P   T ++VL AC+H
Sbjct: 471 AVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSH 530

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           +GLV E +  F+SM + + IQP + H +CM+DILGRAG+ + A++ +  +  +  AS+W 
Sbjct: 531 SGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWR 590

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
            LL A R   N+++ ++ AE +  +EP  ++ +V LSN+YA  G W +    RR M+  +
Sbjct: 591 PLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKE 650

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           + KEPG SWIEV +K+Y F   D++H    ++Y KL ++   +   GY P   T LH   
Sbjct: 651 ISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPES 710

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
              KEQL+ +HSEKLAV FGL++ PPG  IRV KNLR+C+DC+++ ++IS+I  R I
Sbjct: 711 RQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767



 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 186/529 (35%), Positives = 287/529 (54%), Gaps = 31/529 (5%)

Query: 115  GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
            GR +H + + +G     + A  L+  Y + G L +A  +F  I + +I  W  +   C  
Sbjct: 822  GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881

Query: 175  HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
                + AL  F +M+   + PN F   S LKAC  +  +  G  +H  ++K   +SD  +
Sbjct: 882  RGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYI 941

Query: 235  GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
               L+ MY+KCG +++A  +F  + +K+L+  N ++SG+ Q+G   EA  L   M + GV
Sbjct: 942  ISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV 1001

Query: 295  GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
              +  + +T+   +A F  +G                D  +V+ +       G VE    
Sbjct: 1002 KPNVVSWNTL---IAGFSQVG----------------DKSMVSEVFRLMTANG-VEP--- 1038

Query: 355  IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                    D+V+ TS+I+ + Q     E    + EM D+   P S   SSLL AC N++ 
Sbjct: 1039 --------DVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVAN 1090

Query: 415  YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
               GK++H + +  G   D +  ++LV+MYAKCG I +A   F  +P+R  V+W+++I G
Sbjct: 1091 LRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFG 1150

Query: 475  LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
             A HG   EA+++F QM E     +H+T  +VL AC+HAG+V   +  F  M++K+ I+P
Sbjct: 1151 YANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEP 1210

Query: 535  MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
              EHYACM+D+LGRAGK  EA +L+  MP + +  VWGALLGA R + N+E+ + AAE L
Sbjct: 1211 RLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHL 1270

Query: 595  FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIE 643
            F +EPE   + +LLSN+YA AG W N AK+++ MK  K  K PG SWIE
Sbjct: 1271 FELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 283/537 (52%), Gaps = 16/537 (2%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C  +  + LG + H  VV  G  SDEFV  SL+ MYAKCG    + R++D +     
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            + N L S Y    F  +A   F ++   G RPN ++ S+M+  C        G+++H +
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW- 180
            +K+ Y S+    NAL+ +Y+K G +E+A  VF+ +   +I+SW A I G   ++H D+ 
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASING--FYQHGDFK 297

Query: 181 -ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            ALK F  M+ S I PN FT++  L +C  ++    GR  H  +IK  + S   VG  ++
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357

Query: 240 DMYAKCGSMDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           DMY+  G MDEA   F  M    + ++WN +I+G++ N    +A   F  M +E V  ++
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNE 417

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T S + K+ +SF ++    Q+H+  +K+  ES+ ++ +SLI+AY +CG +E+AV++F +
Sbjct: 418 FTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQ 477

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            S  D+V+  S+I AY+Q G   +A+ L  +M +    P S    ++L+AC++    ++G
Sbjct: 478 ISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEG 537

Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLA 476
           ++    +++ +    +    + +V++  + G +++A     ++  +   S W  ++    
Sbjct: 538 QEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAAC- 596

Query: 477 QHGRGKEALQMFGQMLEDGVL---PNHITL-VSVLCACNHAGLVAEAKHHFESMEKK 529
              R    LQM  + + + +L   PN  T+ V++       G  A+A++    ME+K
Sbjct: 597 ---RYNSNLQM-AEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQK 649



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 224/479 (46%), Gaps = 45/479 (9%)

Query: 9    KDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
            + L+ G  +H  +V  G     + A  L+  Y +CG   ++R+LFD IP  ++  W  L 
Sbjct: 817  RALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLT 876

Query: 69   SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
                   F EEA+  F EM   G+RPN+F L S++ AC    D   G  +H   +K  ++
Sbjct: 877  GACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFE 936

Query: 129  SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
            SD +  +AL+ MY+K G++E A  VF  I   D+V  NA+++G   H     AL L Q+M
Sbjct: 937  SDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKM 996

Query: 189  KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
            + + + PN+ ++ +                                   L+  +++ G  
Sbjct: 997  QQAGVKPNVVSWNT-----------------------------------LIAGFSQVGDK 1021

Query: 249  DEARMIFHLMP----EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
                 +F LM     E ++++W  VISG +QN  + E    F  M  +G      T+S++
Sbjct: 1022 SMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSL 1081

Query: 305  LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
            L +  +   +   K++H  ++    E D Y+ ++L+D Y KCG++ +A  +F      + 
Sbjct: 1082 LPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNT 1141

Query: 365  VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
            V   S+I  YA  G   EA++L+ +M++ +   D    +++LNAC++    E G+ +   
Sbjct: 1142 VTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXK 1201

Query: 425  II-KFGFMSDTFAGNSLVNMYAKCGSIDDAD---RAFSEIPDRGIVSWSAMIGGLAQHG 479
            +  K+           +V++  + G + +A    +A    PD+ +  W A++G    HG
Sbjct: 1202 MQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFV--WGALLGACRNHG 1258



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 39/457 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +   +  G Q+H  VV   + S+  V N+L+ +Y+KCG   ++  +F+++ +R+
Sbjct: 220 MLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRN 279

Query: 61  VVSWN-SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           ++SW  S+   Y H DF ++A+  F  M  SGI PNEF+ S ++ +C    D + GR  H
Sbjct: 280 IISWTASINGFYQHGDF-KKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFH 338

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEHN 178
              IK G  S +F   A++DMY+ +G +++A   FK +      VSWNA+IAG VL+E  
Sbjct: 339 TQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKI 398

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A++ F +M   ++  N FTY++  KAC+         Q+H  LIK  ++S+  V   L
Sbjct: 399 EKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSL 458

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           ++ Y +CGS++ A  +F  + + ++++WN +I  + QNG   +A  L   M  EG     
Sbjct: 459 IEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTS 518

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            T  TVL + +    +   ++     V+  + + ++   + ++D  G+ G +E+A+   K
Sbjct: 519 XTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIK 578

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           + +                                  + P + +   LL AC   S  + 
Sbjct: 579 KLT----------------------------------MKPTASIWRPLLAACRYNSNLQM 604

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
            + V   I+     +D     +L NMYA+ G   DA+
Sbjct: 605 AEYVAEKILDLE-PNDATVYVTLSNMYAEVGRWADAE 640



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 211/471 (44%), Gaps = 77/471 (16%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            +LKAC    D   G  +H +++   F+SD ++ ++L+ MY+KCG+   + R+FD I ++ 
Sbjct: 910  ILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKD 969

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +V  N++ S Y    F+ EA+   ++M  +G++PN  S +++I   +  GD         
Sbjct: 970  LVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDK-------- 1021

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               M ++V  L  A  V      PD+VSW +VI+G V + HN  
Sbjct: 1022 ------------------SMVSEVFRLMTANGV-----EPDVVSWTSVISGFVQNFHNHE 1058

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
                F++M      P+  T +S L AC  +     G+++H   + + ++ D  V   LVD
Sbjct: 1059 GFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVD 1118

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MYAKCG + EA+++F++MPE+N + WN +I G+  +G   EA  LF  M       D  T
Sbjct: 1119 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLT 1178

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             + VL + +     G+ +   +L  K     + Y +   ++ Y                 
Sbjct: 1179 FTAVLNACSH---AGMVELGESLFXKM---QEKYRIEPRLEHY----------------- 1215

Query: 361  AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                 AC  M+    + G   EA  L   M    + PD FV  +LL AC N    E  + 
Sbjct: 1216 -----AC--MVDLLGRAGKLSEAYDLIKAM---PVEPDKFVWGALLGACRNHGNIELAEV 1265

Query: 421  VHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDA--------DRAFSEIP 461
               H+ +   +     G+SL+  N+YA  G   +A         R F + P
Sbjct: 1266 AAEHLFE---LEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFP 1313



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 168/383 (43%), Gaps = 45/383 (11%)

Query: 199  TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
            TY  A+   A       GR LH  L+ + +         L+  Y +CG +  AR +F  +
Sbjct: 805  TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864

Query: 259  PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
            P  N+  W ++     + G   EA S F  M +EG+  +Q  L ++LK+          +
Sbjct: 865  PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924

Query: 319  QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
             +H + +K +FESD YI+++LI  Y KCGHVE A ++F      DLV   +M++ YAQ G
Sbjct: 925  NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984

Query: 379  LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
               EAL L  +MQ   + P                                   +  + N
Sbjct: 985  FVHEALBLVQKMQQAGVKP-----------------------------------NVVSWN 1009

Query: 439  SLVNMYAKCGSIDDADRAFSEIPDRG----IVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
            +L+  +++ G        F  +   G    +VSW+++I G  Q+    E    F +ML+ 
Sbjct: 1010 TLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQ 1069

Query: 495  GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKF 552
            G  P+ +T+ S+L AC +   VA  +H  E       I   ++ Y  + ++D+  + G  
Sbjct: 1070 GFCPSSVTISSLLPACTN---VANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYI 1126

Query: 553  QEAMELVDTMPFQANASVWGALL 575
             EA  L   MP + N   W +L+
Sbjct: 1127 SEAKILFYMMP-ERNTVTWNSLI 1148



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 226/546 (41%), Gaps = 86/546 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + KAC+S   L   +Q+H  ++ +  +S+  VA+SL+  Y +CG+  ++ ++F  I +  
Sbjct: 423 IFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDAD 482

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK--- 117
           VVSWNS+   Y       +A+   ++M+  G +P   +  ++++AC+ SG    G++   
Sbjct: 483 VVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFK 542

Query: 118 --IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
             +  YSI+     +    + +VD+  + G LE+A+   K +   P    W  ++A C  
Sbjct: 543 SMVQDYSIQ----PEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAAC-- 596

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
             +++  +  +   K  ++ PN                                  D  V
Sbjct: 597 RYNSNLQMAEYVAEKILDLEPN----------------------------------DATV 622

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNL-----IAWNIVISGHLQNGGDMEAASLFPWM 289
            V L +MYA+ G   +A     LM +K +      +W  V +   +     +A    P +
Sbjct: 623 YVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKV 682

Query: 290 YR---------EGVGFDQTTLSTVLKSVAS----------FQAIGVCKQVHALSVKTAFE 330
           Y          + +G+   T +TVL   +            + + VC  + +L       
Sbjct: 683 YEKLKQLVRQIQDIGYSPPT-TTVLHPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIR 741

Query: 331 SDDYIVNSL---IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
               ++ +L   +D Y    ++      +  +      A  S+I             ++Y
Sbjct: 742 ----VLKNLRVCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLINR-------ANVYRVY 790

Query: 388 LEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
             +   R     S   +  ++  A   A  +G+ +H H++  G    T+    L++ Y +
Sbjct: 791 RNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTE 850

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG + +A + F +IP+  I  W  + G  A+ G  +EAL  F +M ++G+ PN   L S+
Sbjct: 851 CGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 910

Query: 507 LCACNH 512
           L AC H
Sbjct: 911 LKACGH 916


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/556 (40%), Positives = 342/556 (61%), Gaps = 1/556 (0%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G QLH  ++K  +++ P+V   L+++Y+K      +  +F   P+K+   W+ VIS   Q
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N   + A   F  M  +GV  D     +  K+    +   V K VH L+VKT +  D ++
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +SL+D Y KCG + DA  +F E    ++V+ + MI  YAQ   G EAL L+ +    ++
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           + + F  SS++  C++ +  E GK +H   +K  F S +F G++L+++Y+KCG I+ A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F EIP R +  W++M+   AQH   +    +F +M   G+ PN I  +SVL AC+HAGL
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGL 343

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V + + +F S+ + +GI+P  EHYA ++D+LGRAGK QEA+ ++  MP +   SVWGALL
Sbjct: 344 VEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
              RI+K+ E+    A+ +  ++   S  HVLLSN YA+AG ++  A++R+ ++D  +KK
Sbjct: 403 TGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKK 462

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G+SW+E  +KV+TFT GDRSHA+  EIY KL+E+ + + KAGYV      L  V+  E
Sbjct: 463 ETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEE 522

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K + + +HSE+LA+AFGLI  PPG  IRV KNLR+C DCH + +F+SK   R +IVRD N
Sbjct: 523 KNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNN 582

Query: 756 RFHHFRNGSCSCGGYW 771
           RFH F +G CSCG YW
Sbjct: 583 RFHRFEDGKCSCGDYW 598



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 200/380 (52%), Gaps = 1/380 (0%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H + +K G  +    ++ L+++Y+K      ++ VF +       +W++VI+    
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +E    AL+ F++M +  + P+   Y SA KAC  +   ++G+ +HC  +K     D  V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVDMYAKCG + +AR +F  MPE+N+++W+ +I G+ Q    +EA +LF     E V
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             +  T S+V++  +S   + + K +H L +K +F+S  ++ ++LI  Y KCG +E A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F E    +L    SM+ A AQ    +    L+ EM +  + P+     S+L AC++   
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGL 343

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIG 473
            E+G++    +  +G   +T    SLV++  + G + +A     ++P R   S W A++ 
Sbjct: 344 VEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLT 403

Query: 474 GLAQHGRGKEALQMFGQMLE 493
           G   H   + A  +  ++LE
Sbjct: 404 GCRIHKDTEMAAFVADRILE 423



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 188/358 (52%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L + T  + L  GLQ+H  ++  G  +   V+++L+ +Y+K    + S ++FD  P++S
Sbjct: 31  LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W+S+ S +   +    A+ FF+ M+  G+RP++    S   AC     S +G+ +H 
Sbjct: 91  STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K GY  D+F  ++LVDMYAK G + DA  +F ++   ++VSW+ +I G    +    
Sbjct: 151 LAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE 210

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF+Q    +++ N FT++S ++ C+     ELG+ +H   +KM   S   VG  L+ 
Sbjct: 211 ALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALIS 270

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+KCG ++ A  +F  +P +NL  WN ++    Q+        LF  M   G+  +   
Sbjct: 271 LYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIX 330

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
             +VL + +    +   ++  +L      E +     SL+D  G+ G +++AV + K+
Sbjct: 331 FLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQ 388



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 147/271 (54%), Gaps = 1/271 (0%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           KAC   +   +G  VH + V TG+  D FV +SLV MYAKCG   D+R LFD +PER+VV
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV 193

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           SW+ +   Y   D   EA+  FK+ ++  +  N+F+ SS+I  C+ S    LG+ IHG  
Sbjct: 194 SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLC 253

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
           +K+ +DS  F  +AL+ +Y+K G +E A  VF +I   ++  WN+++  C  H H     
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVF 313

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
            LF++M +  + PN   + S L AC+   L E GR+    +    I+ +      LVD+ 
Sbjct: 314 GLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLL 373

Query: 243 AKCGSMDEARMIFHLMPEKNLIA-WNIVISG 272
            + G + EA  +   MP +   + W  +++G
Sbjct: 374 GRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V++ C+S   L LG  +HG+ +   FDS  FV ++L+ +Y+KCG    + ++FD IP R+
Sbjct: 233 VIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRN 292

Query: 61  VVSWNS-LFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +  WNS L +C  H    +     F+EM   G++PN     S++ AC+ +G    GR+  
Sbjct: 293 LGLWNSMLIACAQHAH-TQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF 351

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
                 G + +     +LVD+  + G L++AV+V K +   P    W A++ GC +H+  
Sbjct: 352 SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDT 411

Query: 179 DWA 181
           + A
Sbjct: 412 EMA 414



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 22/204 (10%)

Query: 395 INPDSF------VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +N +SF      +C+ LL+   + S   QG Q+H HI+KFG  +     ++L+N+Y+K  
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRS-LRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQ 74

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
               + + F E P +   +WS++I   AQ+     ALQ F +ML DGV P+     S   
Sbjct: 75  LPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATK 134

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC-------MIDILGRAGKFQEAMELVDT 561
           AC   G +  +      + K      ++  Y C       ++D+  + G+  +A  L D 
Sbjct: 135 AC---GFLRRS-----DVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDE 186

Query: 562 MPFQANASVWGALLGAARIYKNVE 585
           MP +   S  G + G A++   VE
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVE 210


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/800 (30%), Positives = 430/800 (53%), Gaps = 75/800 (9%)

Query: 12  FLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           FLGL +HG ++  G D SD  V ++ +  Y +C +   + +LFD +P+R  ++WN +   
Sbjct: 4   FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
            +     E+AV  F+EM  SG +  + ++  ++  C+       GR+IHGY ++LG +S+
Sbjct: 64  NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123

Query: 131 MFSANALVDMYAKVGNLE-------------------------------DAVAVFKDIE- 158
           +   N+L+ MY++ G LE                               DA+ +  ++E 
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183

Query: 159 ---HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
               PDIV+WN++++G      +  A+ + ++M+ + + P+  + +S L+A A     +L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G+ +H  +++ ++  D  V   L+DMY K G +  ARM+F +M  KN++AWN ++SG   
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
                +A +L   M +EG+  D  T                                   
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITW---------------------------------- 329

Query: 336 VNSLIDAYGKCGHVEDAV----KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            NSL   Y   G  E A+    K+ ++  A ++V+ T++ +  ++ G    ALK++++MQ
Sbjct: 330 -NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +  + P++   S+LL     LS    GK+VH   ++   + D +   +LV+MY K G + 
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448

Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            A   F  I ++ + SW+ M+ G A  GRG+E +  F  MLE G+ P+ IT  SVL  C 
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508

Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
           ++GLV E   +F+ M  ++GI P  EH +CM+D+LGR+G   EA + + TM  + +A++W
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568

Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
           GA L + +I++++E+ + A + L  +EP  S+ ++++ N+Y++   W++V ++R  M++N
Sbjct: 569 GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628

Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
           +++ +   SWI++   V+ F    ++H    +IY +L ++   + K+GYVP       D+
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDI 688

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
            +SEKE+LL  H+EKLA+ +GLI     A IRV KN  IC D HT  +++S + +REI++
Sbjct: 689 SDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVL 748

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           ++  R HHFR+G CSC   W
Sbjct: 749 QEGARVHHFRDGKCSCNDSW 768



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 242/524 (46%), Gaps = 86/524 (16%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C++K+    G Q+HG V+  G +S+  + NSL+VMY++ G    SR++F+++ +R+
Sbjct: 95  LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154

Query: 61  VVSWNSLFSCYVHCDFLE-----------------------------------EAVCFFK 85
           + SWNS+ S Y    +++                                   +A+   K
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M ++G++P+  S+SS++ A A  G   LG+ IHGY ++     D++    L+DMY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            L  A  VF  ++  +IV+WN++++G                           +Y   LK
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSG--------------------------LSYACLLK 308

Query: 206 ACAGMELKELGRQLHCSLIKME---IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK- 261
               +            +I+ME   IK D I    L   YA  G  ++A  +   M EK 
Sbjct: 309 DAEAL------------MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356

Query: 262 ---NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
              N+++W  + SG  +NG    A  +F  M  EGVG +  T+ST+LK +     +   K
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           +VH   ++     D Y+  +L+D YGK G ++ A++IF       L +   M+  YA FG
Sbjct: 417 EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 476

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAG 437
            GEE +  +  M +  + PD+   +S+L+ C N    ++G K   +   ++G +      
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536

Query: 438 NSLVNMYAKCGSIDDA---DRAFSEIPDRGIVSWSAMIGGLAQH 478
           + +V++  + G +D+A    +  S  PD  I  W A +     H
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMSLKPDATI--WGAFLSSCKIH 578


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/776 (34%), Positives = 425/776 (54%), Gaps = 66/776 (8%)

Query: 49  SRRLFD-AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           +RR +  +I  +    WNSL +     +  + A+ FF  M    +  N F+  +++ ACA
Sbjct: 5   TRRWYHCSISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACA 63

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSW 165
                L   ++H Y  +LG  +D FSA ALVD Y K G+   A  VF ++     D+VSW
Sbjct: 64  ALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSW 123

Query: 166 NAVIA-----GCVLHEHNDWALKLFQQMK-------SSEINPNMFTYTSALKACA---GM 210
            A+I+     GCV     D A K F +M+       S     ++ +  + + ACA   G 
Sbjct: 124 TALISAYSSNGCV-----DEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNI 268
                G  +H  ++K        +G  +V MY+ C  +  A  +F+ +P  ++++++WN 
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238

Query: 269 VISGHLQNGGDMEAASLFPWMYREG---VGFDQTTLSTVLKSVASFQAIGVCKQVHA-LS 324
           +ISG   NG    A   F  M  EG   V  ++ T+  +LKS A    +     VH  +S
Sbjct: 239 LISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298

Query: 325 VKTA---FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
            + +      D  ++ +L+D + +CG++  A +IF      ++V  ++MI  Y Q    E
Sbjct: 299 SRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPE 358

Query: 382 EALKLYLEMQDR------EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           EAL+L+ +M         E+ P++    S++ AC+ L A      +H + +  G   D  
Sbjct: 359 EALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDAR 418

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             ++L++M AKCG I+   + FSE+ +  R +VSWS+MIG    HG GK AL++F +M  
Sbjct: 419 IASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRT 478

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G  PN IT +SVL AC+HAGLV + K  F SMEK +G+ P  +HYAC++D+LGRAG   
Sbjct: 479 GGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA  ++  MP +A+ ++WG+LL A  ++ N ++G+   + + +++      HVLL+N+Y 
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYE 598

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
            AG WD+V ++R  ++ + L+K PG S+IE+ ++VY+F   DRSH  S+ IY +LD + +
Sbjct: 599 DAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDE 658

Query: 674 LLNKAG-YVPMVETDLHDVEESEKEQLLY---HHSEKLAVAFGLI--------------A 715
            + KA  YV   ET L +VE+ +   L+    +HSE+LA+AFGLI              A
Sbjct: 659 RVRKAAKYV--TETGL-NVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTA 715

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TP    IR+ KNLR+C DCH   + +SK++ RE+IVRD +RFHHFR+G CSCG YW
Sbjct: 716 TP----IRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 265/528 (50%), Gaps = 36/528 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC + + L   LQVH  +   G  +D F A +LV  Y KCG+   + ++FD +PE S
Sbjct: 58  LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117

Query: 61  --VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNE------FSLSSMINACA-GSG 110
             VVSW +L S Y     ++EA   F  M  + G   +E       SL ++++ACA G G
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCG 177

Query: 111 DSLL--GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWN 166
            + L  G  +HG  +K G+       N++V MY+   ++  A  VF    IE  D+VSWN
Sbjct: 178 SNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWN 237

Query: 167 AVIAGCVLHEHNDWALKLFQQMKS---SEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
           ++I+G  L+   + AL+ F+ M S   S + PN  T  + LK+CA +   E    +H  +
Sbjct: 238 SLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI 297

Query: 224 ----IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
                 + +  D +V   L+DM+A+CG++  AR IF  +  KN++ W+ +I+G+ Q    
Sbjct: 298 SSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCP 357

Query: 280 MEAASLFPWMYREG------VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            EA  LF  M  EG      V  +  TL +V+ + +   A      +H  +V T  + D 
Sbjct: 358 EEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDA 417

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            I ++LID   KCG +E   ++F E   S   +V+ +SMI A    G G+ AL+L+ EM+
Sbjct: 418 RIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMR 477

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSI 450
                P+     S+L+AC++    EQGK     + K   MS T    + LV++  + G +
Sbjct: 478 TGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHL 537

Query: 451 DDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           D+A      +P +  +  W +++     HG  K      G+++E  +L
Sbjct: 538 DEAHNVILNMPIKADLALWGSLLAACHLHGNCK-----LGEIVEKKIL 580


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/683 (34%), Positives = 395/683 (57%), Gaps = 2/683 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K CT   ++ LG  +  +++  GFD D FVA+SL+ +YA  G   D+RR FD + ++ 
Sbjct: 16  VIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKD 75

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V WN + + YV C   + A+  FK+M+ S  +P+  + + +++          GR++HG
Sbjct: 76  CVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHG 135

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             ++ G D      N LV +Y+K   L DA  +F  +   D+V WN +I G V +   D 
Sbjct: 136 LVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDD 195

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACA-GMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A  LF +M S+ I P+  T+TS L + A    LK++ +++H  +++  +  D  +   L+
Sbjct: 196 ASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQI-KEIHGYIVRHGVILDVYLNSALI 254

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D+Y KC     A  +F+L  + +++ +  +ISG++ NG + +A  +F W+ ++ +  +  
Sbjct: 255 DLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNAL 314

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T S++L + A   AI + +++H   +K   E    + +++++ Y KCG ++ A  IF   
Sbjct: 315 TFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRI 374

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S  D +   S+IT+++Q G  EEA+ L+ +M    +  D    S+ L+ACAN+ A   GK
Sbjct: 375 SIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGK 434

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
           ++H  +IK  F SD F  ++L+NMYAKCG ++ A   F+ + ++  V+W+++I     HG
Sbjct: 435 EIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHG 494

Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
              ++L +F  MLE+G+ P+HIT +++L +C HAG V +   +F  M +++GI    EHY
Sbjct: 495 YLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHY 554

Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           ACM D+ GRAG   EA E++ +MPF   ASVWG LLGA R++ NVE+ + A+  L  +EP
Sbjct: 555 ACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEP 614

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
           + S  ++LL+++ A AG W +V K++  MK+  ++K PG SWIEV +    F   D SH 
Sbjct: 615 KNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHP 674

Query: 660 RSKEIYAKLDEVSDLLNKAGYVP 682
            S +IY+ L  +   L K GYVP
Sbjct: 675 ESPQIYSLLKSLLLELRKVGYVP 697



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 270/491 (54%), Gaps = 2/491 (0%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+  G+ P++++   +I  C G  +  LG+ I    +++G+D DMF A++L+ +YA  G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           +EDA   F  +   D V WN +I G V    +D A+KLF+ M SSE  P+  T+   L  
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
                + E GRQLH  +++  +   P+VG  LV +Y+K   + +AR +F +MP+ +L+ W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           N +I G++QNG   +A+ LF  M   G+  D  T ++ L S+A   ++   K++H   V+
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
                D Y+ ++LID Y KC     A K+F  S+  D+V  T+MI+ Y   G+ ++AL++
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
           +  +  +++ P++   SS+L ACA L+A + G+++H +IIK         G++++NMYAK
Sbjct: 301 FRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAK 360

Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
           CG +D A   F  I  +  + W+++I   +Q G+ +EA+ +F QM  +GV  + +T+ + 
Sbjct: 361 CGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAA 420

Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
           L AC +   +   K     M K      + +  A +I++  + GK   A  LV  +  + 
Sbjct: 421 LSACANIPALHYGKEIHGFMIKGAFESDLFDMSA-LINMYAKCGKLNIA-RLVFNLMQEK 478

Query: 567 NASVWGALLGA 577
           N   W +++ A
Sbjct: 479 NEVAWNSIIAA 489


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/598 (37%), Positives = 361/598 (60%), Gaps = 10/598 (1%)

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           LK    + S E NP   T    + + A          +H  L+      DP +   L++M
Sbjct: 54  LKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINM 113

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           +++  ++D AR +F    ++ +  WN +       G   +   L+P M   GV  D+ T 
Sbjct: 114 FSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTY 173

Query: 302 STVLKS------VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           + +LK+      + SF   G  K++HA  ++  + +  +++ +L+D Y + G V  A  +
Sbjct: 174 TYLLKACVASECLVSFLQKG--KEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLS 413
           F E    ++V+ ++MI  YA+ G   EAL+L+ EM     +  P+S    S+L ACA  +
Sbjct: 232 FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA 291

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A EQGK +H +I++ G  S     ++L+ MYA+CG ++     F  +  + +V W+++I 
Sbjct: 292 ALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLIS 351

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
               HG G++A+++F +M++ G  P+HI+ +SVL AC+H GLV E K  FESM K+ GIQ
Sbjct: 352 SYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQ 411

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  EHYACM+D+LGRA +  EA ++++ +  +    VWG+LLGA RI+ +VE+ + A++ 
Sbjct: 412 PSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKR 471

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           LF +EP  +  +VLL++IYA A MWD V +V++ +   +L+K PG SWIEV+ K+Y+FT 
Sbjct: 472 LFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTS 531

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
            D  + + ++++A L  +S+ + + GY P  +  L+D+++ EKE+++  HSEKLAVAFGL
Sbjct: 532 VDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGL 591

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I T  G TIR+ KNLR+C DCH+  +FISK   REI+VRD+NRFHHF++G CSCG YW
Sbjct: 592 INTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 213/458 (46%), Gaps = 60/458 (13%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
            L VH ++V  GFD D F+A  L+ M+++     ++R++FD   +R++  WN+LF     
Sbjct: 88  ALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALAL 147

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL-----GRKIHGYSIKLGYD 128
                + +  +  M + G+  + F+ + ++ AC  S + L+     G++IH + ++ GY 
Sbjct: 148 AGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVAS-ECLVSFLQKGKEIHAHILRHGYG 206

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           + +     L+DMYA+ G +  A AVF ++   ++VSW+A+IA    +     AL+LF++M
Sbjct: 207 AHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 266

Query: 189 --KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
              + +  PN  T  S L+ACA     E G+ +H  +++  + S   V   L+ MYA+CG
Sbjct: 267 MLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 326

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            ++  ++IF  M +K+++ WN +IS +  +G   +A  +F  M   G      +  +VL 
Sbjct: 327 KLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVL- 385

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-------S 359
                   G C                             G VE+  K+F+         
Sbjct: 386 --------GACSHT--------------------------GLVEEGKKLFESMVKEHGIQ 411

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
            +V+  AC  M+    +    +EA K+   ++D  I P   V  SLL AC      E  +
Sbjct: 412 PSVEHYAC--MVDLLGRANRLDEAAKI---IEDLRIEPGPKVWGSLLGACRIHCHVELAE 466

Query: 420 QVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADR 455
           +    + K   +  T AGN   L ++YA+    D+  R
Sbjct: 467 RASKRLFK---LEPTNAGNYVLLADIYAEAEMWDEVKR 501



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 9/262 (3%)

Query: 1   VLKACTSKKDL--FL--GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
           +LKAC + + L  FL  G ++H  ++  G+ +   V  +L+ MYA+ G    +  +FD +
Sbjct: 176 LLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235

Query: 57  PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR--PNEFSLSSMINACAGSGDSLL 114
           P ++VVSW+++ +CY       EA+  F+EM+L+     PN  ++ S++ ACA       
Sbjct: 236 PVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQ 295

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G+ IH Y ++ G DS +   +AL+ MYA+ G LE    +F  +   D+V WN++I+   L
Sbjct: 296 GKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGL 355

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           H +   A+K+F++M     +P+  ++ S L AC+   L E G++L  S++K E    P V
Sbjct: 356 HGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVK-EHGIQPSV 414

Query: 235 G--VGLVDMYAKCGSMDEARMI 254
                +VD+  +   +DEA  I
Sbjct: 415 EHYACMVDLLGRANRLDEAAKI 436


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 353/599 (58%), Gaps = 12/599 (2%)

Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
           LK   Q+   E NP   T+   + +C        G  +H  L+   +  DP +   L++M
Sbjct: 59  LKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINM 118

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           Y   GS+D A  +F    EK +  WN +           +   L+  M   G+  ++ T 
Sbjct: 119 YCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTY 178

Query: 302 STVLKSVASFQAIGVC-----KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           + VLK+      + +C     K++HA  ++  +E   +++ +L+D Y + G+V  A  +F
Sbjct: 179 TYVLKACV-VSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVF 237

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLY----LEMQDREINPDSFVCSSLLNACANL 412
                 ++V+ ++MI  YA+  +  +AL+L+    LE  D   NP + V  S+L ACA+L
Sbjct: 238 GAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMV--SVLQACASL 295

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +A E GK VH ++++ G  S     N+L+ MY +CG I    R F  +  R ++SW+++I
Sbjct: 296 AALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLI 355

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
                HG GK+A+Q+F  M+  GV P++IT ++VLCAC+HAGLV EAK  FESM  K+ I
Sbjct: 356 SIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRI 415

Query: 533 QPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAE 592
            P  EHYACM+DILGRA +  EA+EL+  M F+   +VWG+LLG+ RI+ NVE+ + A+ 
Sbjct: 416 HPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASA 475

Query: 593 MLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFT 652
           MLF +EP+ +  +VLLS+IYA + MW++V +VR+ ++   L+K P  SWIEVK K+Y+  
Sbjct: 476 MLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLV 535

Query: 653 VGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
             +  + + +E+ A L  +   +   GYVP      +D++E EKE+++  HS KLAVAFG
Sbjct: 536 SIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFG 595

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI T  G  IR+  NLR+C DCH   +F+SK  +REI++RDVNRFH F++G CSCG YW
Sbjct: 596 LINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 193/393 (49%), Gaps = 8/393 (2%)

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P + +   +IN+C        G  +H   +  G D D + A  L++MY  +G+++ A  V
Sbjct: 72  PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F +     I  WNA+     +    +  L L+ QM    I  N FTYT  LKAC   EL 
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191

Query: 214 ----ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
                 G+++H  +++   +    V   L+D+YA+ G +  A  +F  MP+KN+++W+ +
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAM 251

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           I+ + +N   M+A  LF  M  E      +  T+ +VL++ AS  A+   K VHA  ++ 
Sbjct: 252 IACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR 311

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
             +S   ++N+LI  YG+CG +    ++F      D+++  S+I+ Y   GLG++A++++
Sbjct: 312 GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIF 371

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
             M +R ++P      ++L AC++    E+ K +   ++ K+           +V++  +
Sbjct: 372 ENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGR 431

Query: 447 CGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
              +D+A      +  + G   W +++G    H
Sbjct: 432 ANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIH 464



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 224/473 (47%), Gaps = 44/473 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ +C  +  L  G+ VH  +V +G D D ++A  L+ MY   G+   + ++FD   E++
Sbjct: 80  LINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKT 139

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL----GR 116
           +  WN++F         E+ +  + +M   GI  N F+ + ++ AC  S  S+     G+
Sbjct: 140 IFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGK 199

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH + ++ GY+  +     L+D+YA+ G +  A +VF  +   +IVSW+A+IA    +E
Sbjct: 200 EIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNE 259

Query: 177 HNDWALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
               AL+LFQ M  ++ +  PN  T  S L+ACA +   E G+ +H  +++  + S   V
Sbjct: 260 MPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPV 319

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY +CG +   + +F  M ++++I+WN +IS +  +G   +A  +F  M   GV
Sbjct: 320 LNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGV 379

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
                T  TVL           C   HA  V+ A      +  S+++ Y           
Sbjct: 380 SPSYITFITVL-----------CACSHAGLVEEA----KILFESMLNKY----------- 413

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
             +    ++  AC  M+    +    +EA++L   +Q+ +  P   V  SLL +C     
Sbjct: 414 --RIHPRMEHYAC--MVDILGRANRLDEAIEL---IQNMDFKPGPTVWGSLLGSCRIHCN 466

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
            E  ++    + +   +    AGN   L ++YAK    +D  R   ++  RG+
Sbjct: 467 VELAERASAMLFE---LEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGL 516


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/699 (34%), Positives = 388/699 (55%), Gaps = 14/699 (2%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSAN 135
           L EA  F +EM  +G+  + +S   +  AC        GR +H   +++G ++  +   N
Sbjct: 64  LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQN 122

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
            ++ MY +  +LEDA  +F ++   + VS   +I+        D A+ LF  M +S   P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
               YT+ LK+       + GRQ+H  +I+  + S+  +  G+V+MY KCG +  A+ +F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             M  K  +A   ++ G+ Q G   +A  LF  +  EGV +D    S VLK+ AS + + 
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQ+HA   K   ES+  +   L+D Y KC   E A + F+E    + V+ +++I+ Y 
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362

Query: 376 QFGLGEEALKLYLEMQDREINP-DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           Q    EEA+K +  ++ +  +  +SF  +S+  AC+ L+    G QVH   IK   +   
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           +  ++L+ MY+KCG +DDA+  F  + +  IV+W+A I G A +G   EAL++F +M+  
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
           G+ PN +T ++VL AC+HAGLV + KH  ++M +K+ + P  +HY CMIDI  R+G   E
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           A++ +  MPF+ +A  W   L     +KN+E+G+ A E L  ++PE ++ +VL  N+Y  
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTW 602

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
           AG W+  A++ + M +  LKKE   SWI+ K K++ F VGD+ H +++EIY KL E    
Sbjct: 603 AGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGF 662

Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT--PPGATIRVKKNLRICV 732
           +         E D+     +E+ + L  HSE+LA+AFGLI+      A I+V KNLR C 
Sbjct: 663 M---------EGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACP 713

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH   + +S +   EI++RD  RFHHF+ G CSC  YW
Sbjct: 714 DCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 247/508 (48%), Gaps = 10/508 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC   + L  G  +H  +     +    + N ++ MY +C +  D+ +LFD + E +
Sbjct: 89  LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VS  ++ S Y     L++AV  F  M+ SG +P     ++++ +         GR+IH 
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + I+ G  S+      +V+MY K G L  A  VF  +     V+   ++ G         
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           ALKLF  + +  +  + F ++  LKACA +E   LG+Q+H  + K+ ++S+  VG  LVD
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG-FDQT 299
            Y KC S + A   F  + E N ++W+ +ISG+ Q     EA   F  +  +     +  
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T +++ ++ +      +  QVHA ++K +     Y  ++LI  Y KCG ++DA ++F+  
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+VA T+ I+ +A +G   EAL+L+ +M    + P+S    ++L AC++    EQGK
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508

Query: 420 Q-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
             +   + K+         + ++++YA+ G +D+A +    +P +   +SW   + G   
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568

Query: 478 HGR-------GKEALQMFGQMLEDGVLP 498
           H         G+E  Q+  +     VLP
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLP 596



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 238/510 (46%), Gaps = 54/510 (10%)

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           H   + A +  Q+M  + ++ + ++Y    +AC  +     GR LH   ++M I++  ++
Sbjct: 61  HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVL 119

Query: 235 GVGLV-DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
               V  MY +C S+++A  +F  M E N ++   +IS + + G   +A  LF  M   G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
                +  +T+LKS+ + +A+   +Q+HA  ++    S+  I   +++ Y KCG +  A 
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F + +    VACT ++  Y Q G   +ALKL++++    +  DSFV S +L ACA+L 
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               GKQ+H  + K G  S+   G  LV+ Y KC S + A RAF EI +   VSWSA+I 
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359

Query: 474 GLAQHGRGKEALQMFGQML-EDGVLPNHITLVSVLCACN-----------HA-------- 513
           G  Q  + +EA++ F  +  ++  + N  T  S+  AC+           HA        
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419

Query: 514 ----------------GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
                           G + +A   FESM+      P    +   I      G   EA+ 
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMD-----NPDIVAWTAFISGHAYYGNASEALR 474

Query: 558 LVDTM---PFQANASVWGALLGAARIYKNVEVGQHAAEML---FAIEPEKSSTHVLLSNI 611
           L + M     + N+  + A+L A      VE G+H  + +   + + P       ++ +I
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI-DI 533

Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
           YA +G+ D   K   FMK+   + +  MSW
Sbjct: 534 YARSGLLDEALK---FMKNMPFEPD-AMSW 559


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/691 (35%), Positives = 390/691 (56%), Gaps = 26/691 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDS-------DEFVANSLVVMYAKCGNFIDSRRLF 53
           ++ AC+  + L  G +VH  +V +   S       +  + N L+ MY             
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG------------ 97

Query: 54  DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
                R+ VSW S+ + +V      +A+  F  M+ SG   ++F+L S + AC   GD  
Sbjct: 98  -----RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 152

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
            GR++H +++K    SD+   NALV MY+K G ++D   +F+ I+  D++SW ++IAG  
Sbjct: 153 TGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 212

Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                  AL++F++M      +PN F + SA +AC  +   E G Q+H   IK  +  D 
Sbjct: 213 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 272

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  L DMYA+C ++D AR+ F+ +   +L++WN +++ +   G   EA  LF  M   
Sbjct: 273 YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 332

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D  T+  +L +     A+   + +H+  VK   + D  + NSL+  Y +C  +  A
Sbjct: 333 GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSA 392

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           + +F E    D+V   S++TA AQ    EE LKL+  +   E + D    +++L+A A L
Sbjct: 393 MDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 452

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAM 471
             +E  KQVH +  K G + D    N+L++ YAKCGS+DDA R F  +  +R + SWS++
Sbjct: 453 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 512

Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
           I G AQ G  KEA  +F +M   G+ PNH+T + VL AC+  G V E  +++  ME ++G
Sbjct: 513 IVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 572

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           I P +EH +C++D+L RAGK  EA   +D MPF+ +  +W  LL A++++ ++E+G+ AA
Sbjct: 573 IVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAA 632

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
           E +  I+P  S+ +VLL NIYA++G W+  A++++ M+ + +KK PG SW+++K ++  F
Sbjct: 633 EGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVF 692

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
            V DRSH  S+EIYA L+ +   + KAGYVP
Sbjct: 693 IVEDRSHPESEEIYAMLELIGMEMIKAGYVP 723



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 38/442 (8%)

Query: 200 YTSALKACAGMELKELGRQLHCSLI-------KMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           Y + + AC+ +     GR++H  L+         ++  + ++G  L+ MY          
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
                   +N ++W  VI+ H+QNG   +A  LF  M R G   DQ  L + +++     
Sbjct: 98  --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
            +G  +QVHA ++K+   SD  + N+L+  Y K G V+D   +F+     DL++  S+I 
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209

Query: 373 AYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFM 431
            +AQ G   EAL+++ EM  +   +P+ F   S   AC  + ++E G+Q+H   IK+   
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269

Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
            D + G SL +MYA+C ++D A  AF  I    +VSW++++   +  G   EAL +F +M
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329

Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHH---FESMEKKFGIQPMQEHYACMIDILGR 548
            + G+ P+ IT+  +LCAC    +  +A +H     S   K G+         ++ +  R
Sbjct: 330 RDSGLRPDGITVRGLLCAC----VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYAR 385

Query: 549 AGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLL 608
                 AM++   +  Q +   W ++L A   + + E       +L   EP  S   + L
Sbjct: 386 CSDLSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SLDRISL 442

Query: 609 SNIYASA---GMWDNVAKVRRF 627
           +N+ +++   G ++ V +V  +
Sbjct: 443 NNVLSASAELGYFEMVKQVHAY 464


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/674 (35%), Positives = 389/674 (57%), Gaps = 4/674 (0%)

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           SS+I   A +      R +H   IK G+ S  F  + L+D Y K G+L +A  +F ++  
Sbjct: 5   SSLIAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELPS 63

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
             IV+WN++I+  + H  +  A++ +  M    + P+ +T+++  KA + + L   G++ 
Sbjct: 64  RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRA 123

Query: 220 HCSLIKMEIKS-DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           H   + + ++  D  V   LVDMYAK   M +A ++F  + EK+++ +  +I G+ Q+G 
Sbjct: 124 HGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGL 183

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
           D EA  +F  M   GV  ++ TL+ +L +  +   +   + +H L VK+  ES      S
Sbjct: 184 DGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTS 243

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y +C  +ED++K+F +    + V  TS +    Q G  E A+ ++ EM    I+P+
Sbjct: 244 LLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPN 303

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
            F  SS+L AC++L+  E G+Q+H   +K G   + +AG +L+N+Y KCG++D A   F 
Sbjct: 304 PFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFD 363

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
            + +  +V+ ++MI   AQ+G G EAL++F ++   G++PN +T +S+L ACN+AGLV E
Sbjct: 364 VLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEE 423

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
               F S+     I+   +H+ CMID+LGR+ + +EA  L++ +    +  +W  LL + 
Sbjct: 424 GCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSC 482

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           +I+  VE+ +     +  + P    TH+LL+N+YASAG W+ V +++  ++D KLKK P 
Sbjct: 483 KIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPA 542

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
           MSW++V  +V+TF  GD SH RS EI+  L  +   +   GY P     L D++E +K  
Sbjct: 543 MSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKIS 602

Query: 699 LLYHHSEKLAVAFGLIAT-PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRF 757
            LY+HSEKLA+A+ L  T     TIR+ KNLR+C DCH+  +F+S +  R+II RD  RF
Sbjct: 603 SLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRF 662

Query: 758 HHFRNGSCSCGGYW 771
           HHF+ G CSC  YW
Sbjct: 663 HHFKGGLCSCKDYW 676



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 278/521 (53%), Gaps = 13/521 (2%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VH  V+ +GF S  F+ + L+  Y KCG+  ++R+LFD +P R +V+WNS+ S ++    
Sbjct: 23  VHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGK 81

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSAN 135
            +EAV F+  M++ G+ P+ ++ S++  A +  G    G++ HG ++ LG +  D F A+
Sbjct: 82  SKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVAS 141

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
           ALVDMYAK   + DA  VF+ +   D+V + A+I G   H  +  ALK+F+ M +  + P
Sbjct: 142 ALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKP 201

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N +T    L  C  +     G+ +H  ++K  ++S       L+ MY++C  ++++  +F
Sbjct: 202 NEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVF 261

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
           + +   N + W   + G +QNG +  A S+F  M R  +  +  TLS++L++ +S   + 
Sbjct: 262 NQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLE 321

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           V +Q+HA+++K   + + Y   +LI+ YGKCG+++ A  +F   + +D+VA  SMI AYA
Sbjct: 322 VGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYA 381

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII---KFGFMS 432
           Q G G EAL+L+  +++  + P+     S+L AC N    E+G Q+   I          
Sbjct: 382 QNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTI 441

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D F    ++++  +   +++A     E+ +  +V W  ++     HG  + A ++  ++L
Sbjct: 442 DHFT--CMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKIL 499

Query: 493 E----DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           E    DG    HI L ++  +      V E K     ++ K
Sbjct: 500 ELAPGDG--GTHILLTNLYASAGKWNQVIEMKSTIRDLKLK 538



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 241/508 (47%), Gaps = 62/508 (12%)

Query: 14  GLQVHGIVVFTGFDS-DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G + HG+ V  G +  D FVA++LV MYAK     D+  +F  + E+ VV + +L   Y 
Sbjct: 120 GQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYA 179

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                 EA+  F++MV  G++PNE++L+ ++  C   GD + G+ IHG  +K G +S + 
Sbjct: 180 QHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVA 239

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
           S  +L+ MY++   +ED++ VF  +++ + V+W + + G V +   + A+ +F++M    
Sbjct: 240 SQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCS 299

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
           I+PN FT +S L+AC+ + + E+G Q+H   +K+ +  +   G  L+++Y KCG+MD+AR
Sbjct: 300 ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKAR 359

Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
            +F ++ E +++A N +I  + QNG   EA  LF  +   G+  +  T  ++L       
Sbjct: 360 SVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILL------ 413

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---KESSAVDLVA--C 367
                                        A    G VE+  +IF   + +  ++L     
Sbjct: 414 -----------------------------ACNNAGLVEEGCQIFASIRNNHNIELTIDHF 444

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T MI    +    EEA  L  E++    NPD  +  +LLN+C      E  ++V   I++
Sbjct: 445 TCMIDLLGRSRRLEEAAMLIEEVR----NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE 500

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW-------SAMIGGL 475
                D      L N+YA  G  +      S I D  +     +SW          + G 
Sbjct: 501 LA-PGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGD 559

Query: 476 AQHGRGKEALQMFGQMLED----GVLPN 499
             H R  E  +M   +++     G  PN
Sbjct: 560 LSHPRSLEIFEMLHGLMKKVKTLGYNPN 587



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 147/274 (53%), Gaps = 5/274 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +  DL  G  +HG+VV +G +S      SL+ MY++C    DS ++F+ +   +
Sbjct: 209 ILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYAN 268

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W S     V     E AV  F+EM+   I PN F+LSS++ AC+      +G +IH 
Sbjct: 269 QVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHA 328

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++KLG D + ++  AL+++Y K GN++ A +VF  +   D+V+ N++I     +     
Sbjct: 329 ITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHE 388

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI---KMEIKSDPIVGVG 237
           AL+LF+++K+  + PN  T+ S L AC    L E G Q+  S+     +E+  D      
Sbjct: 389 ALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHF--TC 446

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
           ++D+  +   ++EA M+   +   +++ W  +++
Sbjct: 447 MIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLN 480


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/690 (35%), Positives = 375/690 (54%), Gaps = 3/690 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ ACT+ + L  G ++H  ++ +    D  + N ++ MY KCG+  D+R+ FD +  RS
Sbjct: 86  LILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRS 145

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW  + S Y       +A+  + +M+ SG  P++ +  S+I AC  +GD  LG ++HG
Sbjct: 146 VVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHG 205

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           + IK GYD  + + NAL+ MY K G +  A  VF  I   D++SW ++I G     +   
Sbjct: 206 HVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIE 265

Query: 181 ALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           AL LF+ M +     PN F + S   AC  +   E GRQ+     K  +  +   G  L 
Sbjct: 266 ALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLC 325

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAK G +  A+  F+ +   +L++WN +I+  L N    EA   F  M   G+  D  
Sbjct: 326 DMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA-LANSDVNEAIYFFCQMIHMGLMPDDI 384

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE- 358
           T   +L +  S   +    Q+H+  +K   +    + NSL+  Y KC ++ DA  +FK+ 
Sbjct: 385 TFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDI 444

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           S   +LV+  ++++A +Q     EA +L+  M   E  PD+   +++L  CA L + E G
Sbjct: 445 SENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVG 504

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
            QVH   +K G + D    N L++MYAKCG +  A   F    +  IVSWS++I G AQ 
Sbjct: 505 NQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQF 564

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G G+EAL +F  M   GV PN +T + VL AC+H GLV E  H + +ME + GI P +EH
Sbjct: 565 GLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREH 624

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
            +CM+D+L RAG   EA   +    F  + ++W  LL + + + NV++ + AAE +  ++
Sbjct: 625 VSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLD 684

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S+  VLLSNI+ASAG W  VA++R  MK   ++K PG SWIEVKD+++ F   D SH
Sbjct: 685 PSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSH 744

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
            +   IY  L+++   +   GY P    D+
Sbjct: 745 PQRGNIYTMLEDLWLQMLDDGYDPCQRLDI 774



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 217/426 (50%), Gaps = 4/426 (0%)

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQ-QMKSSEINPNMFTYTSALKACAGMELKELGR 217
           H   +S N+ I      +H   AL  F   +K+S I     TY + + AC  +   + G+
Sbjct: 41  HGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGK 100

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           ++H  ++K   + D ++   +++MY KCGS+ +AR  F  M  +++++W I+ISG+ QNG
Sbjct: 101 RIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNG 160

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
            + +A  ++  M R G   DQ T  +++K+      I +  Q+H   +K+ ++      N
Sbjct: 161 QENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQN 220

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI-N 396
           +LI  Y K G +  A  +F   S  DL++  SMIT + Q G   EAL L+ +M  + +  
Sbjct: 221 ALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQ 280

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P+ F+  S+ +AC +L   E G+Q+     KFG   + FAG SL +MYAK G +  A RA
Sbjct: 281 PNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRA 340

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F +I    +VSW+A+I  LA +    EA+  F QM+  G++P+ IT +++LCAC  + + 
Sbjct: 341 FYQIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACG-SPMT 398

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
                   S   K G+  +      ++ +  +     +A  +   +    N   W A+L 
Sbjct: 399 LNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILS 458

Query: 577 AARIYK 582
           A   +K
Sbjct: 459 ACSQHK 464


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 338/564 (59%), Gaps = 17/564 (3%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G QLH  ++K  +   P+V   L++ Y+K     ++R  F   P+K+   W+ +IS   Q
Sbjct: 34  GLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQ 93

Query: 276 NGGDMEAASLFPWMYRE--------GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
           N          PWM  E         +  D   L +  KS        + K VH LS+KT
Sbjct: 94  NE--------LPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKT 145

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            +++D ++ +SL+D Y KCG +  A K+F E    ++V  + M+  YAQ G  EEAL L+
Sbjct: 146 GYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLF 205

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
            E     +  + +  S++++ CAN +  E G+Q+    IK  F S +F G+SLV++Y+KC
Sbjct: 206 KEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKC 265

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G ++ A + F E+P R +  W+AM+   AQH   ++ +++F +M   G+ PN IT ++VL
Sbjct: 266 GDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVL 325

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+HAGLV E K++F+ M K+  I+P  +HYA ++D+LGRAGK +EA+E+V  MP    
Sbjct: 326 NACSHAGLVDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPT 384

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
            SVWGALL +  I+KN E+   AA+ +F + P  S  H+ LSN YA+ G +++ AK R+ 
Sbjct: 385 ESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444

Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
           ++D   KKE G+SW+E ++KV+TF  G+R H RSKEIY KL E+ + + KAGYV      
Sbjct: 445 LRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYV 504

Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
           L +V+  EK Q + +HSE+LA+AFGLI  P    IRV KNLR+C DCH + +F+S    R
Sbjct: 505 LREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRR 564

Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
            IIVRD NRFH F +G CSC  YW
Sbjct: 565 VIIVRDNNRFHRFEDGKCSCNDYW 588



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 234/511 (45%), Gaps = 57/511 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L +    + +  GLQ+HG +V +G      VAN+L+  Y+K     DSRR F+  P++S
Sbjct: 21  LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W+S+ SC+   +    ++ F ++M+   +RP++  L S   +C       +G+ +H 
Sbjct: 81  ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            S+K GYD+D+F  ++LVDMYAK G +  A  +F ++   ++V+W+ ++ G      N+ 
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEE 200

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL LF++     +  N +++++ +  CA   L ELGRQ+    IK    S   VG  LV 
Sbjct: 201 ALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVS 260

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y+KCG ++ A  +F  +P +NL  WN ++    Q+    +   LF  M   G+  +  T
Sbjct: 261 LYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFIT 320

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL + +    +   K    L  ++  E  D    SL+D  G+ G +E+A++I     
Sbjct: 321 FLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEI----- 375

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC-----ANLSAY 415
                                        + +  I+P   V  +LL +C       L+A+
Sbjct: 376 -----------------------------VTNMPIDPTESVWGALLTSCTIHKNTELAAF 406

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW-- 468
              K   +  +  G         SL N YA  G  +DA +A   + DRG      +SW  
Sbjct: 407 AADKVFELGPVSSGMHI------SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVE 460

Query: 469 -----SAMIGGLAQHGRGKEALQMFGQMLED 494
                     G  +H R KE  +   ++ E+
Sbjct: 461 ERNKVHTFAAGERRHERSKEIYEKLAELGEE 491



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 206/402 (51%), Gaps = 11/402 (2%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++HGY +K G       AN L++ Y+K     D+   F+D       +W+++I+ C  
Sbjct: 34  GLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIIS-CFA 92

Query: 175 HEHNDW-ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                W +L+  ++M +  + P+     SA K+C  +   ++G+ +HC  +K    +D  
Sbjct: 93  QNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVF 152

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
           VG  LVDMYAKCG +  AR +F  MP +N++ W+ ++ G+ Q G + EA  LF     E 
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
           +  +  + STV+   A+   + + +Q+  L +K++F+S  ++ +SL+  Y KCG +E A 
Sbjct: 213 LAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAY 272

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           ++F E    +L    +M+ A AQ    ++ ++L+  M+   + P+     ++LNAC++  
Sbjct: 273 QVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332

Query: 414 AYEQGKQVHVHIIKFGFMSDT---FAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWS 469
             ++GK  +  ++K   +  T   +A  SLV+M  + G +++A    + +P D     W 
Sbjct: 333 LVDEGK-YYFDLMKESRIEPTDKHYA--SLVDMLGRAGKLEEALEIVTNMPIDPTESVWG 389

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPN--HITLVSVLCA 509
           A++     H   + A     ++ E G + +  HI+L +   A
Sbjct: 390 ALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAA 431



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 2/274 (0%)

Query: 304 VLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
           +L S A  ++I    Q+H   VK+       + N+LI+ Y K     D+ + F++S    
Sbjct: 21  LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80

Query: 364 LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
               +S+I+ +AQ  L   +L+   +M    + PD  V  S   +C  LS  + GK VH 
Sbjct: 81  ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140

Query: 424 HIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
             +K G+ +D F G+SLV+MYAKCG I  A + F E+P R +V+WS M+ G AQ G  +E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEE 200

Query: 484 ALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMI 543
           AL +F + L + +  N  +  +V+  C ++ L+ E     + +  K          + ++
Sbjct: 201 ALWLFKEALFENLAVNDYSFSTVISVCANSTLL-ELGRQIQGLCIKSSFDSSSFVGSSLV 259

Query: 544 DILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +  + G  + A ++ D +P + N  +W A+L A
Sbjct: 260 SLYSKCGDLEGAYQVFDEVPMR-NLGIWNAMLKA 292


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/562 (40%), Positives = 345/562 (61%), Gaps = 7/562 (1%)

Query: 217 RQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGS---MDEARMIFHLMPEK-NLIAWNIVIS 271
           RQ+H   I+  +  SD  +G  L+       S   M  A  +F  + +  N+  WN +I 
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 272 GHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
           G+ + G  + A SL+  M   G V  D  T   +LK+V     + + + +H++ +++ F 
Sbjct: 94  GYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG 153

Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
           S  Y+ NSL+  Y  CG V  A K+F +    DLVA  S+I  +A+ G  EEAL LY EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
             + I PD F   SLL+ACA + A   GK+ HV++IK G   +  + N L+++YA+CG +
Sbjct: 214 DLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLCA 509
           ++A   F E+ D+  VSW+++I GLA +G GKEA+++F  M  ++G+LP  IT V +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYA 333

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+H G+V E   +F  M +++ I+P  EH+ CM+D+L RAG+ ++A E +  MP Q N  
Sbjct: 334 CSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVV 393

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +W  LLGA  ++ + ++ + A   +  +EP  S  +VLLSN+YAS   W +V K+R+ M 
Sbjct: 394 IWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
            + ++K PG S +EV ++V+ F +GD+SH ++  IYAKL E++D L   GYVP +     
Sbjct: 454 RDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYV 513

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           DVEE EKE  L +HSEK+A+AF LI+TP    IRV KNL++C DCH + + +SK+ +REI
Sbjct: 514 DVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREI 573

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           +VRD +RFHHF+NGSCSC  YW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 166/299 (55%), Gaps = 26/299 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA     D+ LG  +H +V+ +GF S  +V NSL+ +YA CG+   + ++FD +PE+ 
Sbjct: 127 LLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WNS+ + +      EEA+  + EM L GI+P+ F++ S+++ACA  G   LG++ H 
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHV 246

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK+G   ++ S+N L+D+YA+ G +E+A  +F ++   + VSW ++I G  ++     
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKE 306

Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIK----------MEIK 229
           A++LF+ M+S E + P   T+   L AC+           HC ++K           E K
Sbjct: 307 AIELFKNMESKEGLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMSEEYK 355

Query: 230 SDP-IVGVG-LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASL 285
            +P I   G +VD+ A+ G + +A      MP + N++ W  ++ G     GD + A L
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL-GACTVHGDSDLAEL 413



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 197/400 (49%), Gaps = 23/400 (5%)

Query: 116 RKIHGYSIKLGYD-SDMFSANALVDMYAKVGN---LEDAVAVFKDIEHP-DIVSWNAVIA 170
           R+IH +SI+ G   SD      L+     + +   +  A  VF  IE P ++  WN +I 
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 171 GCVLHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           G     ++  A+ L+++M++S  + P+  TY   LKA   M    LG  +H  +I+    
Sbjct: 94  GYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG 153

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
           S   V   L+ +YA CG +  A  +F  MPEK+L+AWN VI+G  +NG   EA +L+  M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             +G+  D  T+ ++L + A   A+ + K+ H   +K     + +  N L+D Y +CG V
Sbjct: 214 DLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNA 408
           E+A  +F E    + V+ TS+I   A  GLG+EA++L+  M+ +E + P       +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYA 333

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIP 461
           C++    ++G +       F  MS+ +           +V++ A+ G +  A     ++P
Sbjct: 334 CSHCGMVKEGFEY------FRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMP 387

Query: 462 -DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
               +V W  ++G    HG    A     ++L+  + PNH
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAELARMKILQ--LEPNH 425



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 166/358 (46%), Gaps = 45/358 (12%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI 118
           +V  WN+L   Y        AV  ++EM  SG + P+  +   ++ A     D  LG  I
Sbjct: 84  NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   I+ G+ S ++  N+L+ +YA  G++  A  VF  +   D+V+WN+VI G   +   
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + AL L+ +M    I P+ FT  S L ACA +    LG++ H  +IK+ +  +      L
Sbjct: 204 EEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVL 263

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFD 297
           +D+YA+CG ++EA+ +F  M +KN ++W  +I G   NG   EA  LF  M  +EG+   
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPC 323

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIVNSLIDAYGKCGHVEDA 352
           + T   +L + +           H   VK  FE     S++Y +   I+ +G        
Sbjct: 324 EITFVGILYACS-----------HCGMVKEGFEYFRRMSEEYKIEPRIEHFG-------- 364

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
                            M+   A+ G  ++A +  L+M    + P+  +  +LL AC 
Sbjct: 365 ----------------CMVDLLARAGQVKKAYEYILKMP---MQPNVVIWRTLLGACT 403


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/562 (41%), Positives = 343/562 (61%), Gaps = 6/562 (1%)

Query: 216 GRQLHCSLIKMEI-KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           GRQLH   ++  +  SD      L+ MY  C    +AR  F  +P  N +    + SG +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 275 QNGGDMEAASLFPWMYREGVG--FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           +N       S+F  M   G     D+      L + A     G+   +HAL  K   +  
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 333 DYIVNSLIDAYGKCG-HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
             + N++IDAY K G H   A +   +    D+V+  +MI  YAQ GL  EAL LY +M 
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKML 286

Query: 392 --DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
               ++  ++   S++L ACA+  A + GK++H  +++ G   + + G S+V+MY+KCG 
Sbjct: 287 IVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGK 346

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           ++ A +AF +I  + I+SWSAMI G   HG G+EAL +F  M + G+ PN+IT ++VL A
Sbjct: 347 VEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAA 406

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+HAGL++E ++ + +M+ +FGI+P  EHY CM+D+LGRAG   EA  L+  M  + +A+
Sbjct: 407 CSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAA 466

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           +WGALL A RIYKNVE+ +  AE LF ++   S  +VLLSNIYA AGMW  V ++R  +K
Sbjct: 467 LWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVK 526

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
              ++K PG S +E+K K + F VGD+SH + KEIYA L+++ + ++ AGYVP   + LH
Sbjct: 527 TRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLH 586

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D++  E+E +L  HSEKLAVAF L+ +  G+ I V KNLR+C DCH + + I+K+  REI
Sbjct: 587 DLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREI 646

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           I+RD+ RFHHF++G CSCG YW
Sbjct: 647 IIRDLKRFHHFKDGLCSCGDYW 668



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 148/264 (56%), Gaps = 13/264 (4%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCG--NFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           +H +V   G D    VAN+++  YAK G  +   +R+LFD + +R VVSWN++ + Y   
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQN 272

Query: 75  DFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
               EA+  + +M++ G  +R N  +LS+++ ACA +G    G++IH   +++G + +++
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
              ++VDMY+K G +E A   F+ I+  +I+SW+A+IAG  +H +   AL +F  M+ S 
Sbjct: 333 VGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG 392

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG----LVDMYAKCGSM 248
           + PN  T+ + L AC+   L   GR  + ++ K E   +P  GV     +VD+  + G +
Sbjct: 393 LKPNYITFITVLAACSHAGLLSEGRYWYNTM-KTEFGIEP--GVEHYGCMVDLLGRAGCL 449

Query: 249 DEARMIFHLMPEKNLIA-WNIVIS 271
           DEA  +   M  K   A W  ++S
Sbjct: 450 DEAYGLIKEMKVKPDAALWGALLS 473



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 216/459 (47%), Gaps = 42/459 (9%)

Query: 14  GLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G Q+H + + +G F SD + A++L+ MY  C   +D+RR FD IP  + V   ++ S  +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 73  HCDFLEEAVCFFKEMVLSGIRP--NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
             + +   +  F+ MV SG     +E +    ++A A   D  +   IH    K+G D  
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 131 MFSANALVDMYAKVG--NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
              AN ++D YAK G  +L  A  +F D+   D+VSWN +IA    +  +  AL L+ +M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLF-DMMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 189 --KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
                ++  N  T ++ L ACA     + G+++H  +++M ++ +  VG  +VDMY+KCG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
            ++ A   F  +  KN+++W+ +I+G+  +G   EA  +F  M + G+  +  T  TVL 
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           +         C     LS         Y  N++   +G    +E  V+ +          
Sbjct: 406 A---------CSHAGLLS------EGRYWYNTMKTEFG----IEPGVEHY---------G 437

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
           C  M+    + G  +EA  L  EM+   + PD+ +  +LL+AC      E  K     + 
Sbjct: 438 C--MVDLLGRAGCLDEAYGLIKEMK---VKPDAALWGALLSACRIYKNVELAKICAERLF 492

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +    +  +    L N+YA+ G   + +R    +  RGI
Sbjct: 493 ELDATNSGYY-VLLSNIYAEAGMWKEVERMRVLVKTRGI 530



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 115/220 (52%), Gaps = 4/220 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     +  G ++H  VV  G + + +V  S+V MY+KCG    + + F  I  ++
Sbjct: 302 VLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKN 361

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ + Y    + +EA+  F +M  SG++PN  +  +++ AC+ +G    GR  + 
Sbjct: 362 ILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYN 421

Query: 121 -YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               + G +  +     +VD+  + G L++A  + K+++  PD   W A+++ C ++++ 
Sbjct: 422 TMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNV 481

Query: 179 DWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGR 217
           + A    +++ +    N   +   S + A AGM  KE+ R
Sbjct: 482 ELAKICAERLFELDATNSGYYVLLSNIYAEAGM-WKEVER 520


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/761 (34%), Positives = 397/761 (52%), Gaps = 73/761 (9%)

Query: 20  IVVFTGFDSDEFVANSL-VVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLE 78
           +++   + +   V NS  +   ++ G   ++R+ FD++  +++ SWNS+ S Y       
Sbjct: 6   LILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPR 65

Query: 79  EAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALV 138
           EA   F EM                                        + ++ S N LV
Sbjct: 66  EARQMFDEMP---------------------------------------ERNIVSWNGLV 86

Query: 139 DMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMF 198
             Y K   +E+A  VF+ +   ++VSW A++ G V       A  LF +M       N  
Sbjct: 87  SGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER----NEV 142

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           ++T            +  R+L+     M    D +    ++    + G +DEAR IF  M
Sbjct: 143 SWTVMFGGLIDGGRIDDARKLY----DMMPGKDVVASTNMIGGLCREGRVDEAREIFDEM 198

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG--------VGFDQTTLSTVLKSVAS 310
            E+N+I W  +I+G+ QN     A  LF  M  +         +G+   TLS  ++    
Sbjct: 199 RERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGY---TLSGRIEDAEE 255

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
           F  +   K V A              N++I A G+ G +  A ++F +    D      M
Sbjct: 256 FFEVMPMKPVIA-------------CNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGM 302

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I AY + G   EAL+L+ +MQ + + P      S+L+ CA L++ + G+QVH H+++  F
Sbjct: 303 IKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             D +  + L+ MY KCG +  A   F   P + I+ W+++I G A HG G+EAL++F +
Sbjct: 363 DGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHE 422

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M   G +PN +TL+++L AC++ G + E    FESME KF + P  EHY+C +D+LGRAG
Sbjct: 423 MPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           K  +AMEL+++M  + +A+VWGALLGA + +  +++ + AA+ LF IEPE +  ++LLS+
Sbjct: 483 KVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSS 542

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLD 669
           I AS   W +VA++R+ M+   + K PG SWIEV  KV+ FT G  R+H     I   L+
Sbjct: 543 INASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLE 602

Query: 670 EVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLR 729
           +   LL +AGY P     LHDV+E EK   L  HSE+LAVA+GL+  P G  IRV KNLR
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662

Query: 730 ICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           +C DCH + + ISK+  REII+RD NRFHHF NG CSC  Y
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 6/192 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +   L  G QVH  +V   FD D +VA+ L+ MY KCG  + ++ +FD  P + 
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD 396

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           ++ WNS+ S Y      EEA+  F EM LSG  PN+ +L +++ AC+  G    G +I  
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE 456

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               K      +   +  VDM  + G ++ A+ +   +   PD   W A++  C  H   
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRL 516

Query: 179 DW----ALKLFQ 186
           D     A KLF+
Sbjct: 517 DLAEVAAKKLFE 528


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/764 (33%), Positives = 399/764 (52%), Gaps = 74/764 (9%)

Query: 21  VVFTGFDSDEFVANSLVVMYAKCGNFID---SRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           ++ TGF  + + A+ L+  ++    FI    +RR+F+ I   +   WN +   Y+  +  
Sbjct: 1   MLLTGFIRETYAASRLI-KFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSP 59

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
             A   +K M+ + +  + ++   +I AC+        +++H + +KLG+DSD++  N L
Sbjct: 60  HFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTL 119

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           ++ ++   N+ DA  VF +    D VSWN+++AG +   + + A  ++ QM    I    
Sbjct: 120 INCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI---- 175

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL 257
                                              I    ++ ++   G + EA  +F  
Sbjct: 176 -----------------------------------IASNSMIVLFGMRGLVVEACKLFDE 200

Query: 258 MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVC 317
           M EK+++ W+ +I+   QN    EA   F  M++ GV  D+    + L + A+   + + 
Sbjct: 201 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL------------- 364
           K +H+LS+K   ES   + N+LI  Y KCG +  A K+F E+  +DL             
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 320

Query: 365 ------------------VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
                             V+ +SMI+ YAQ  L +E L L+ EMQ     PD     S++
Sbjct: 321 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 380

Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
           +ACA L+A EQGK VH +I + G   +   G +L++MY KCG ++ A   F  + ++GI 
Sbjct: 381 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 440

Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
           +W+A+I GLA +G  + +L MF  M +  V PN IT + VL AC H GLV E +HHF SM
Sbjct: 441 TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM 500

Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEV 586
                IQP  +HY CM+D+LGRAGK QEA EL++ MP   + + WGALLGA + + + E+
Sbjct: 501 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 560

Query: 587 GQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKD 646
           G+     L  ++P+    HVLLSNIYAS G WD+V ++R  M  +++ K PG S IE   
Sbjct: 561 GRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 620

Query: 647 KVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEK 706
            ++ F  GD++H     I   L E++  L   GY P +   L DV+E EKE  L+ HSEK
Sbjct: 621 VIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEK 680

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           LA+AFGLI   P   IR+ KNLRIC DCHT+ + ISK   R+I+
Sbjct: 681 LAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 246/537 (45%), Gaps = 82/537 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++AC+ ++  +   QVH  V+  GFDSD +V N+L+  ++ C N  D+ R+F+      
Sbjct: 84  LIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLD 143

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS+ + Y+    +EEA   + +M                                 
Sbjct: 144 SVSWNSILAGYIEIGNVEEAKHIYHQMP-------------------------------- 171

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                  +  + ++N+++ ++   G + +A  +F ++   D+V+W+A+IA    +E  + 
Sbjct: 172 -------ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 224

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ F  M    +  +     SAL ACA + +  +G+ +H   +K+  +S   +   L+ 
Sbjct: 225 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 284

Query: 241 MYAKCGSM-------------------------------DEARMIFHLMPEKNLIAWNIV 269
           MY+KCG +                               D A+ IF  MPEK++++W+ +
Sbjct: 285 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 344

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG+ QN    E  +LF  M   G   D+TTL +V+ + A   A+   K VHA   +   
Sbjct: 345 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +  +  +LID Y KCG VE A+++F       +    ++I   A  GL E +L ++  
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 464

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQ-----VHVHIIKFGFMSDTFAGNSLVNMY 444
           M+   + P+      +L AC ++   ++G+      +H H I+     +      +V++ 
Sbjct: 465 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ----PNVKHYGCMVDLL 520

Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
            + G + +A+   + +P    + +W A++G   +HG  +   ++  +++E  + P+H
Sbjct: 521 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDH 575


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/685 (35%), Positives = 392/685 (57%), Gaps = 20/685 (2%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           S ++ I +C  S    +   IH    + G  S  +  N LV M AK G+L +A ++F  I
Sbjct: 46  SFAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
           +H +I SWN +I+      H   AL LF +M   ++ P   T+ +AL AC+ +   + GR
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGR 159

Query: 218 QLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           ++H  +     I+   I+   +  MYAKCG +  A+ +F  +P KN+++WN +I+ + Q+
Sbjct: 160 EIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQS 219

Query: 277 G-GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE---SD 332
           G    +A  LF  M   GV   + T   VL +     ++   +++HA  V+T  +    D
Sbjct: 220 GHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRD 276

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             + N+L++ Y KCG +E A  IF++    D V+   MI  +AQ GLG+E+++++ EM  
Sbjct: 277 VGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDL 336

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF-----MSDTFAGNSLVNMYAKC 447
             +  D    +S++ AC+   A E GK++H  +++        + +     +LV+MY KC
Sbjct: 337 EGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKC 396

Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
           G+++ A   F  +  +  VSW+AM+   A  G+G EA         +GV  +  + +SVL
Sbjct: 397 GTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVL 456

Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
            AC+H+G++  A  HF+ M   F + P  E+Y CM+D+L R+G+  +A EL+++MPF  +
Sbjct: 457 IACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPD 516

Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
           A  W  LLG  R+  ++E    AAE  F +EP+ ++ + LLS++Y++ G  D + ++R  
Sbjct: 517 AIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSS 576

Query: 628 MKDNKLKK-EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
           MK+  L+K  PG S IEV  +V+ F  GD SH +  +I  +LD ++  L +AG+VP  + 
Sbjct: 577 MKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDG 636

Query: 687 DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVS 746
            +HD++  +KE++L  HSEKLAVAFGLI+T  G  + V KNLR+C DCH + + ISK+ S
Sbjct: 637 VVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRS 696

Query: 747 REIIVRDVNRFHHFRNGSCSCGGYW 771
           R I VRD NRFH F++G+CSCG YW
Sbjct: 697 RVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 232/475 (48%), Gaps = 18/475 (3%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           +H  +   G  S  ++ N LV+M AK G+  ++R +FDAI  +++ SWN + S Y H   
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY-SIKLGYDSDMFSAN 135
              A+  F +M    + P   + ++ ++AC+  GD   GR+IH       G    +    
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179

Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN-DWALKLFQQMKSSEIN 194
           A+  MYAK G+L  A +VF  I   ++VSWNA+IA      H+   AL LF++M    + 
Sbjct: 180 AIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVR 239

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD-PIVGV--GLVDMYAKCGSMDEA 251
           P   T+   L AC  +   E   ++H  +++  ++ D   VGV   L++MYAKCGS++ A
Sbjct: 240 PCRATFVGVLGACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVA 296

Query: 252 RMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF 311
           R IF  M  ++ ++ N++I+   Q G   E+  +F  M  EG+  D TT ++V+ + +  
Sbjct: 297 RDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCC 356

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVN-----SLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
            A+   K++H   V+        + N     +L+  YGKCG +E A  +FK  +  + V+
Sbjct: 357 GALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVS 416

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHI 425
             +M+ A A  G G+EA           +  DS    S+L AC++    E       + +
Sbjct: 417 WNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLML 476

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
             F  +        +V++ A+ G + DAD   + +P     ++W  ++GG    G
Sbjct: 477 SDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQG 531



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 15/295 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG--FD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           VL AC     L    ++H  +V TG  FD  D  V N+L+ MYAKCG+   +R +F  + 
Sbjct: 248 VLGACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQ 304

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            R  VS N + + +      +E++  F+EM L G+  ++ + +S+I AC+  G    G++
Sbjct: 305 RRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKR 364

Query: 118 IHGYSIK--LGYD---SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           IH   ++  LG      ++    ALV MY K G LE A AVFK +   + VSWNA++A C
Sbjct: 365 IHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAAC 424

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                 D A    +      +  +  ++ S L AC+   + E+    H  L+  +    P
Sbjct: 425 AHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVP 483

Query: 233 IVG--VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAAS 284
                  +VD+ A+ G + +A  + + MP   + IAW  ++ G    G    AAS
Sbjct: 484 AAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAAS 538


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/524 (43%), Positives = 333/524 (63%), Gaps = 3/524 (0%)

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFD-QTTLSTVLKS 307
           AR +F  MP ++  +W+ ++S H+++G    A +++  M RE  G G D + T S+ L +
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAA 171

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
             + +     +++H   V+   ++D  + ++L D Y K G ++DA  +F      D+V+ 
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSW 231

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T+M+  Y   G   E  +L++ M    I P+ F  + +L ACA  ++ + GKQVH  + K
Sbjct: 232 TAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAK 291

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
                  FAG++LV+MY+K G +  A R F  +P   +VSW+AMI G AQ+G+  EAL  
Sbjct: 292 SRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHC 351

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F  +L  G  P+H+T V VL AC HAGLV +    F S++ K+GI+   +HYAC+ID+L 
Sbjct: 352 FDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLS 411

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           R+G F+ A ++++TMP + N  +W +LLG  RI+KNV +   AAE LF IEPE  +T+V 
Sbjct: 412 RSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVT 471

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           L+NIYAS G++D V  +RR M+   + K P  SWIEV  +V+ F VGD+SH +++EIYA 
Sbjct: 472 LANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYAL 531

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L ++   + + GYV      LHDVE+ +K+Q + +HSE+LAVAFG+IATP G+ I+V KN
Sbjct: 532 LKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKN 591

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LRIC DCHT+ + ISKIV REIIVRD NRFHHF+NGSCSC  YW
Sbjct: 592 LRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 202/451 (44%), Gaps = 58/451 (12%)

Query: 34  NSLVVMYAKCGNFIDSRR-LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL--- 89
           N+LV    +    + S R LFD +P R   SW+++ S +V       A+  ++ M+    
Sbjct: 96  NTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPG 155

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            SG   NEF+ SS + A   +  +  GR++H + ++ G D+D    +AL DMYAK G L+
Sbjct: 156 GSGA-DNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLD 214

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA +VF  +   D+VSW A++        +    +LF +M  S I PN FTY   L+ACA
Sbjct: 215 DARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACA 274

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
               ++LG+Q+H  + K         G  LV MY+K G M  A  +F  MP+ +L++W  
Sbjct: 275 EFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTA 334

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG+ QNG   EA   F  +   G   D  T   VL + A           HA  V   
Sbjct: 335 MISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACA-----------HAGLVDKG 383

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
                 I +S+ D YG    +E            D  AC  +I   ++ GL E A  +  
Sbjct: 384 LG----IFHSIKDKYG----IE---------HTADHYAC--VIDLLSRSGLFERAEDMIN 424

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF---------AGNS 439
            M    + P+ F+ +SLL  C          ++H ++    + ++              +
Sbjct: 425 TM---PVKPNKFLWASLLGGC----------RIHKNVRLAWWAAEALFEIEPENPATYVT 471

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           L N+YA  G  D+ +     +  RGI    A
Sbjct: 472 LANIYASVGLFDEVENMRRTMELRGITKMPA 502



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 205/416 (49%), Gaps = 14/416 (3%)

Query: 129 SDMFSANALVDMYAKVGN-LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
           +D+ S N LV    +    L  A A+F  +   D  SW+A+++  V H     AL ++++
Sbjct: 90  TDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRR 149

Query: 188 M---KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           M          N FT +SAL A         GR+LHC +++  I +D +V   L DMYAK
Sbjct: 150 MLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAK 209

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
            G +D+AR +F  MP +++++W  ++  +   G D E   LF  M R G+  ++ T + V
Sbjct: 210 FGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGV 269

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           L++ A F +  + KQVH    K+      +  ++L+  Y K G +  A+++F+     DL
Sbjct: 270 LRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDL 329

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HV 423
           V+ T+MI+ YAQ G  +EAL  +  +      PD      +L+ACA+    ++G  + H 
Sbjct: 330 VSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHS 389

Query: 424 HIIKFGF--MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGR 480
              K+G    +D +A   ++++ ++ G  + A+   + +P +     W++++GG   H  
Sbjct: 390 IKDKYGIEHTADHYA--CVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKN 447

Query: 481 GKEALQMFGQMLEDGVLP-NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
            + A      + E  + P N  T V++       GL  E ++   +ME + GI  M
Sbjct: 448 VRLAWWAAEALFE--IEPENPATYVTLANIYASVGLFDEVENMRRTMELR-GITKM 500



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 4/262 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  VV  G D+D  V ++L  MYAK G   D+R +FD +P R VVSW ++   Y  
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                E    F  M+ SGI PNEF+ + ++ ACA      LG+++HG   K       F+
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +ALV MY+K G++  A+ VF+ +  PD+VSW A+I+G   +   D AL  F  + SS  
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF 360

Query: 194 NPNMFTYTSALKAC--AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEA 251
            P+  T+   L AC  AG+  K LG   H    K  I+        ++D+ ++ G  + A
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLG-IFHSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419

Query: 252 RMIFHLMPEK-NLIAWNIVISG 272
             + + MP K N   W  ++ G
Sbjct: 420 EDMINTMPVKPNKFLWASLLGG 441



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 11/227 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC       LG QVHG +  +      F  ++LV MY+K G+   + R+F  +P+  
Sbjct: 269 VLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSG--DSLLGRKI 118
           +VSW ++ S Y      +EA+  F  ++ SG RP+  +   +++ACA +G  D  LG   
Sbjct: 329 LVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLG-IF 387

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
           H    K G +        ++D+ ++ G  E A  +   +   P+   W +++ GC +H++
Sbjct: 388 HSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKN 447

Query: 178 ND---WALKLFQQMKSSEINPNMFTYTSALKACAGM--ELKELGRQL 219
                WA +   +++    NP  +   + + A  G+  E++ + R +
Sbjct: 448 VRLAWWAAEALFEIEPE--NPATYVTLANIYASVGLFDEVENMRRTM 492


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/719 (35%), Positives = 383/719 (53%), Gaps = 36/719 (5%)

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA--KVGN 146
           + G + NE   ++++       +++  ++IH + ++     D ++A+ L+  YA      
Sbjct: 62  VKGEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC 121

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALK 205
           L  A  VF  I  P++  WN +I G         +  +F  M  S    PN FT+    K
Sbjct: 122 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFK 181

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
           A + +++  LG  LH  +IK  + SD  +   L++ Y   G+ D A  +F  MP K++++
Sbjct: 182 AASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVS 241

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +I+     G   +A  LF  M  + V  +  T+ +VL + A    +   + + +   
Sbjct: 242 WNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIE 301

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM--------------- 370
              F     + N+++D Y KCG + DA  +F + S  D+V+ T+M               
Sbjct: 302 NNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHC 361

Query: 371 ----------------ITAYAQFGLGEEALKLYLEMQ-DREINPDSFVCSSLLNACANLS 413
                           I+AY Q G    AL L+ EMQ  ++  PD       L A A L 
Sbjct: 362 IFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLG 421

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A + G  +HV+I K     +     SL++MYAKCG+++ A   F  +  + +  WSAMIG
Sbjct: 422 AIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIG 481

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
            LA +G+GK AL +F  MLE  + PN +T  ++LCACNHAGLV E +  FE ME  +GI 
Sbjct: 482 ALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIV 541

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  +HY C++DI GRAG  ++A   ++ MP    A+VWGALLGA   + NVE+ + A + 
Sbjct: 542 PQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQN 601

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  +EP      VLLSNIYA AG W+ V+ +R+ M+D+ +KKEP  S I+V   V+ F V
Sbjct: 602 LLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLV 661

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE-KEQLLYHHSEKLAVAFG 712
           GD SH  S++IY+KLDE+S+     GY P +   L   EE    EQ L  HSEKLA+AFG
Sbjct: 662 GDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFG 721

Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LI+T     IR+ KN+RIC DCH   + +S++  R+I++RD  RFHHFR G CSC  YW
Sbjct: 722 LISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 244/539 (45%), Gaps = 52/539 (9%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H  ++ T    D + A+ L+  YA   C   I ++ +F+ IP+ ++  WN+L   Y  
Sbjct: 90  QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149

Query: 74  CDFLEEAVCFFKEMVLSGIR-PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                ++   F  M+ S    PN+F+   +  A +      LG  +HG  IK    SD+F
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLF 209

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
             N+L++ Y   G  + A  VF ++   D+VSWNA+I    L    D AL LFQ+M+  +
Sbjct: 210 ILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKD 269

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSM--- 248
           + PN+ T  S L ACA     E GR + CS I+        I+   ++DMY KCG +   
Sbjct: 270 VKPNVITMVSVLSACAKKIDLEFGRWI-CSYIENNGFTEHLILNNAMLDMYVKCGCINDA 328

Query: 249 ----------------------------DEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
                                       DEA  IF  MP K   AWN +IS + QNG   
Sbjct: 329 KDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPR 388

Query: 281 EAASLFPWM-YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
            A SLF  M   +    D+ TL   L + A   AI     +H    K     + ++  SL
Sbjct: 389 VALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSL 448

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           +D Y KCG++  A+++F      D+   ++MI A A +G G+ AL L+  M +  I P++
Sbjct: 449 LDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNA 508

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
              +++L AC +     +G+Q+   +   +G +        +V+++ + G ++ A     
Sbjct: 509 VTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIE 568

Query: 459 EIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           ++P     + W A++G  ++HG  + A   +  +LE             L  CNH   V
Sbjct: 569 KMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLE-------------LEPCNHGAFV 614



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 161/337 (47%), Gaps = 32/337 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + KA +  K L LG  +HG+V+     SD F+ NSL+  Y   G    + R+F  +P + 
Sbjct: 179 LFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKD 238

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN++ + +      ++A+  F+EM +  ++PN  ++ S+++ACA   D   GR I  
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICS 298

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAG--------- 171
           Y    G+   +   NA++DMY K G + DA  +F  +   DIVSW  ++ G         
Sbjct: 299 YIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDE 358

Query: 172 --CVL-----------------HEHN---DWALKLFQQMK-SSEINPNMFTYTSALKACA 208
             C+                  +E N     AL LF +M+ S +  P+  T   AL A A
Sbjct: 359 AHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASA 418

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +   + G  +H  + K +I  +  +   L+DMYAKCG++++A  +FH +  K++  W+ 
Sbjct: 419 QLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSA 478

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           +I      G    A  LF  M    +  +  T + +L
Sbjct: 479 MIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNIL 515


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 270/776 (34%), Positives = 424/776 (54%), Gaps = 66/776 (8%)

Query: 49  SRRLFD-AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
           +RR +  +I  +    WNSL +     +  + A+ FF  M    +  N F+  +++ ACA
Sbjct: 5   TRRWYXCSISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACA 63

Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP--DIVSW 165
                L   ++H Y  +LG  +D FSA ALVD Y K G+   A  VF ++     D+VSW
Sbjct: 64  ALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSW 123

Query: 166 NAVIA-----GCVLHEHNDWALKLFQQMK-------SSEINPNMFTYTSALKACA---GM 210
            A+I+     GCV     D A   F +M+       S     ++ +  + + ACA   G 
Sbjct: 124 TALISAYSSNGCV-----DEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP--EKNLIAWNI 268
                G  +H  ++K        +G  +V MY+ C  +  A  +F+ +P  ++++++WN 
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238

Query: 269 VISGHLQNGGDMEAASLFPWMYREG---VGFDQTTLSTVLKSVASFQAIGVCKQVHA-LS 324
           +ISG   NG    A   F  M  EG   V  ++ T+  +LKS A    +     VH  +S
Sbjct: 239 LISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298

Query: 325 VKTA---FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
            + +      D  ++ +L+D + +CG++  A +IF      ++V  ++MI  Y Q    E
Sbjct: 299 SRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPE 358

Query: 382 EALKLYLEMQDR------EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
           EAL+L+ +M         E+ P++    S++ AC+ L A      +H + +  G   D  
Sbjct: 359 EALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDAR 418

Query: 436 AGNSLVNMYAKCGSIDDADRAFSEIPD--RGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
             ++L++M AKCG I+   + FSE+ +  R +VSWS+MIG    HG GK AL++F +M  
Sbjct: 419 IASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRT 478

Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
            G  PN IT +SVL AC+HAGLV + K  F SMEK +G+ P  +HYAC++D+LGRAG   
Sbjct: 479 GGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538

Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
           EA  ++  MP +A+ ++WG+LL A  ++ N ++G+   + + +++      HVLL+N+Y 
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYE 598

Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
            AG WD+V ++R  ++ + L+K PG S+IE+ ++VY+F   DRSH  S+ IY +LD + +
Sbjct: 599 DAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDE 658

Query: 674 LLNKAG-YVPMVETDLHDVEESEKEQLLY---HHSEKLAVAFGLI--------------A 715
            + KA  YV   ET L +VE+ +   L+    +HSE+LA+AFGLI              A
Sbjct: 659 RVRKAAKYV--TETGL-NVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTA 715

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           TP    IR+ KNLR+C DCH   + +SK++ RE+IVRD +RFHHFR+G CSCG YW
Sbjct: 716 TP----IRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 265/528 (50%), Gaps = 36/528 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC + + L   LQVH  +   G  +D F A +LV  Y KCG+   + ++FD +PE S
Sbjct: 58  LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117

Query: 61  --VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNE------FSLSSMINACA-GSG 110
             VVSW +L S Y     ++EA   F  M  + G   +E       SL ++++ACA G G
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCG 177

Query: 111 DSLL--GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWN 166
            + L  G  +HG  +K G+       N++V MY+   ++  A  VF    IE  D+VSWN
Sbjct: 178 SNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWN 237

Query: 167 AVIAGCVLHEHNDWALKLFQQMKS---SEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
           ++I+G  L+   + AL+ F+ M S   S + PN  T  + LK+CA +   E    +H  +
Sbjct: 238 SLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI 297

Query: 224 ----IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
                 + +  D +V   L+DM+A+CG++  AR IF  +  KN++ W+ +I+G+ Q    
Sbjct: 298 SSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCP 357

Query: 280 MEAASLFPWMYREG------VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            EA  LF  M  EG      V  +  TL +V+ + +   A      +H  +V T  + D 
Sbjct: 358 EEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDA 417

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKE--SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
            I ++LID   KCG +E   ++F E   S   +V+ +SMI A    G G+ AL+L+ EM+
Sbjct: 418 RIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMR 477

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSI 450
                P+     S+L+AC++    EQGK     + K   MS T    + LV++  + G +
Sbjct: 478 TGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHL 537

Query: 451 DDADRAFSEIPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
           D+A      +P +  +  W +++     HG  K      G+++E  +L
Sbjct: 538 DEAHNVILNMPIKADLALWGSLLAACHLHGNCK-----LGEIVEKKIL 580


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/556 (40%), Positives = 333/556 (59%), Gaps = 1/556 (0%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G+Q+H  +IK  ++  P+V   L++ Y+K      +  +F     K+   W+ VIS   Q
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N   + A   F  M  E +  D     +  K+ A      V K VH L +KT ++ D ++
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFV 192

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +SL+D Y KCG +++A  +F E    ++V+ + MI  Y Q G  EEA++L+ E     +
Sbjct: 193 GSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL 252

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           + + F  SS++  C + +  E GKQ+H    K  +    F G+SL+++Y+KCG I+ A R
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYR 312

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F E+P + +  W+AM+   AQH   KEA  +F +M   G+ PN IT + VL AC+HAGL
Sbjct: 313 VFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGL 372

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V E K +F  M KK+ I+P  +HYA M+D+LGRAGK QEA+ ++  MP +   SVWGA +
Sbjct: 373 VEEGKKYFALM-KKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFI 431

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
              RI+ N ++   AA+ +F +    S  HV+LSN YA+AG +++ AK R+ ++D  +KK
Sbjct: 432 TGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKK 491

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
           E G+SWIE  ++V+ F  GDR H R KEIY KL+++ + + +AGYV      L +V   E
Sbjct: 492 ETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGSEE 551

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           K Q + +HSE+LA+AFGLI+ P G  IR+ KNLR+C DCH + +FISK+  R IIVRD N
Sbjct: 552 KNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNN 611

Query: 756 RFHHFRNGSCSCGGYW 771
           RFH F +G CSC  YW
Sbjct: 612 RFHRFEDGKCSCADYW 627



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 220/432 (50%), Gaps = 9/432 (2%)

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           L G++IH + IK G        + L++ Y+K      +  VF++ E     +W++VI+  
Sbjct: 71  LKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSF 130

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             +E    A++ F +M    + P+   + SA KACA +   ++G+ +HC +IK     D 
Sbjct: 131 AQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDV 190

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            VG  LVDMYAKCG + EAR +F  MP +N+++W+ +I G+ Q G   EA  LF     E
Sbjct: 191 FVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLE 250

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  +  TLS+V++   S   + + KQ+H L  KT+++   ++ +SLI  Y KCG +E A
Sbjct: 251 GLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGA 310

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACA 410
            ++F E    +L    +M+ A AQ    +EA  L+ +M++  + P+  +F+C  +L AC+
Sbjct: 311 YRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLC--VLYACS 368

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WS 469
           +    E+GK+    + K+     T    S+V++  + G + +A      +P     S W 
Sbjct: 369 HAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWG 428

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPN--HITLVSVLCACNHAGLVAEAKHHF--ES 525
           A I G   HG    A     ++ E G + +  H+ L +   A       A+A+       
Sbjct: 429 AFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRG 488

Query: 526 MEKKFGIQPMQE 537
           ++K+ G+  ++E
Sbjct: 489 VKKETGLSWIEE 500



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 1/271 (0%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
           KAC       +G  VH +V+ TG+D D FV +SLV MYAKCG+  ++R +FD +P R+VV
Sbjct: 163 KACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVV 222

Query: 63  SWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYS 122
           SW+ +   Y      EEA+  FKE +L G+  N+F+LSS+I  C  +    LG++IHG  
Sbjct: 223 SWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLC 282

Query: 123 IKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWAL 182
            K  YD   F  ++L+ +Y+K G +E A  VF ++   ++  WNA++  C  H H   A 
Sbjct: 283 FKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAF 342

Query: 183 KLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
            LF +M+++ + PN  T+   L AC+   L E G++    + K EI+        +VD+ 
Sbjct: 343 DLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLL 402

Query: 243 AKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
            + G + EA  +   MP E     W   I+G
Sbjct: 403 GRAGKLQEALSVIKGMPTEPTESVWGAFITG 433



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 220/474 (46%), Gaps = 42/474 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L + T  + L  G Q+H  ++ +G      V + L+  Y+K    + S ++F+    +S
Sbjct: 60  LLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKS 119

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W+S+ S +   +    A+ +F  M+   + P++    S   ACA  G   +G+ +H 
Sbjct: 120 STTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHC 179

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV-LHEHND 179
             IK GYD D+F  ++LVDMYAK G++++A  VF ++ H ++VSW+ +I G   L EH +
Sbjct: 180 LVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEE 239

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A++LF++     ++ N FT +S ++ C    L ELG+Q+H    K        VG  L+
Sbjct: 240 -AMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLI 298

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            +Y+KCG ++ A  +F  +P KNL  WN ++    Q+    EA  LF  M   G+  +  
Sbjct: 299 SLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFI 358

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   VL + +    +   K+  AL  K   E       S++D  G+ G +++A+ + K  
Sbjct: 359 TFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIK-- 416

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
                     M T   +   G                  +F+    ++   +L+A+   K
Sbjct: 417 ---------GMPTEPTESVWG------------------AFITGCRIHGNTDLAAFAADK 449

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSW 468
              +  +  G          L N YA  G  +DA +A   + DRG+     +SW
Sbjct: 450 VFELGAVSSGLHV------MLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSW 497


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/585 (39%), Positives = 339/585 (57%), Gaps = 35/585 (5%)

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           Q+H SL++  +  +PI+   L   YA  G +D +  +F+   E N+ +++ +I  H+Q+ 
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
               A   +  M   GV  +  T S+VLKS +    +   K +H  ++K    SD Y+  
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRT 180

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT------------------------- 372
            L+D Y + G V  A ++F +     LV+ T+M+T                         
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 373 ------AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
                  YAQ G+  E+LKL+  M   +  P+     ++L+AC  L A E G+ +H +I 
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
             G   +   G +L++MY+KCGS++DA   F  I D+ +V+W++MI G A HG  + ALQ
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
           +F +M E G  P  IT + +L AC H GLV E +  F  M  K+GI+P  EHY CM+++L
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
           GRAG  +EA  LV  M   A+  +WG LLG  R++ N+++G+  A+ L   +   S T+V
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480

Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
           LLSN+YA+ G W+ VAK+R  MK++ ++KE G S IEV +KV+ F  G+R H +SKEIY 
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540

Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
            L+E++  L   GY P  +  LHD+ E +KEQ L  HSEKLA+AFGLI+T PG T+++ K
Sbjct: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600

Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           NLR+C DCHT  + IS+I  R+I++RD NRFHHF +G CSCG YW
Sbjct: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 36/369 (9%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   ++ G   +      L   YA +G L+ +V VF   + P++ S++A+I   V   
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             D A   + QM S  + PN FT++S LK+C+     E G+ LHC  IK+ + SD  V  
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRT 180

Query: 237 GLVDMYA-------------------------------KCGSMDEARMIFHLMPEKNLIA 265
           GLVD+YA                               K G +D+AR +F  M E++++ 
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN++I G+ Q+G   E+  LF  M       ++ T+  VL +     A+   + +H+   
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
               + + ++  +LID Y KCG +EDA  +F      D+VA  SMI  YA  G  + AL+
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMY 444
           L+ EM +    P       +L+AC +    E+G+    +   K+G          +VN+ 
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 445 AKCGSIDDA 453
            + G +++A
Sbjct: 421 GRAGHLEEA 429



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 192/413 (46%), Gaps = 40/413 (9%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHC 74
           LQ+H  ++  G   +  +   L   YA  G    S  +F+   E +V S++++   +V  
Sbjct: 64  LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123

Query: 75  DFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
              + A  ++ +M+  G+ PN F+ SS++ +C+       G+ +H  +IKLG  SD++  
Sbjct: 124 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GKVLHCQAIKLGLGSDLYVR 179

Query: 135 NALVDMYA-------------------------------KVGNLEDAVAVFKDIEHPDIV 163
             LVD+YA                               K+G L+ A ++F+ ++  D+V
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239

Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
            WN +I G       + +LKLF++M  ++  PN  T  + L AC  +   E GR +H  +
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299

Query: 224 IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
               I+ +  VG  L+DMY+KCGS+++AR++F  + +K+++AWN +I G+  +G    A 
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHAL 359

Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAFESDDYIVNSLIDA 342
            LF  M   G      T   +L +      +   +    L   K   E        +++ 
Sbjct: 360 QLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNL 419

Query: 343 YGKCGHVEDAVKIFKESS-AVDLVACTSMI---TAYAQFGLGEEALKLYLEMQ 391
            G+ GH+E+A  + K  + A D V   +++     +    LGEE  K  ++ +
Sbjct: 420 LGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQK 472



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 144/284 (50%), Gaps = 38/284 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLK+C+    L  G  +H   +  G  SD +V   LV +YA+ G+ + +R+LFD +PERS
Sbjct: 151 VLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERS 206

Query: 61  VVSWNSLFSCYVHCDFLEEA------------VCF-------------------FKEMVL 89
           +VS  ++ +CY     L++A            VC+                   F+ M++
Sbjct: 207 LVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLV 266

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +   PNE ++ ++++AC   G    GR IH Y    G   ++    AL+DMY+K G+LED
Sbjct: 267 AKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLED 326

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  VF  I   D+V+WN++I G  +H  +  AL+LF++M  +   P   T+   L AC  
Sbjct: 327 ARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGH 386

Query: 210 MELKELGRQLHCSLIKMEIKSDP-IVGVG-LVDMYAKCGSMDEA 251
             L E GR     L++ +   +P I   G +V++  + G ++EA
Sbjct: 387 GGLVEEGRSFF-RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEA 429



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G  +H  +   G   +  V  +L+ MY+KCG+  D+R +FD I ++ 
Sbjct: 279 VLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKD 338

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WNS+   Y    F + A+  F+EM  +G +P + +   +++AC   G    GR    
Sbjct: 339 VVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR 398

Query: 121 Y-SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               K G +  +     +V++  + G+LE+A  + K++    D V W  ++  C LH
Sbjct: 399 LMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH 455


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/740 (34%), Positives = 388/740 (52%), Gaps = 72/740 (9%)

Query: 41  AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLS 100
           ++ G   ++R+ FD++  +++ SWNS+ S Y      +EA   F EM             
Sbjct: 28  SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM------------- 74

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
                                      + ++ S N LV  Y K   + +A  VF+ +   
Sbjct: 75  --------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPER 108

Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
           ++VSW A++ G +       A  LF +M       N  ++T            +  R+L+
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLY 164

Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
                M    D +    ++    + G +DEAR+IF  M E+N++ W  +I+G+ QN    
Sbjct: 165 ----DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220

Query: 281 EAASLFPWMYREG--------VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
            A  LF  M  +         +G+   TLS  ++    F  +   K V A          
Sbjct: 221 VARKLFEVMPEKTEVSWTSMLLGY---TLSGRIEDAEEFFEVMPMKPVIA---------- 267

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
               N++I  +G+ G +  A ++F      D      MI AY + G   EAL L+ +MQ 
Sbjct: 268 ---CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           + + P      S+L+ CA L++ + G+QVH H+++  F  D +  + L+ MY KCG +  
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           A   F     + I+ W+++I G A HG G+EAL++F +M   G +PN +TL+++L AC++
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           AG + E    FESME KF + P  EHY+C +D+LGRAG+  +AMEL+++M  + +A+VWG
Sbjct: 445 AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWG 504

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           ALLGA + +  +++ + AA+ LF  EP+ + T+VLLS+I AS   W +VA VR+ M+ N 
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNN 564

Query: 633 LKKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
           + K PG SWIEV  KV+ FT G  ++H     I   L++   LL +AGY P     LHDV
Sbjct: 565 VSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDV 624

Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
           +E EK   L  HSE+LAVA+GL+  P G  IRV KNLR+C DCH + + ISK+  REII+
Sbjct: 625 DEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIIL 684

Query: 752 RDVNRFHHFRNGSCSCGGYW 771
           RD NRFHHF NG CSC  YW
Sbjct: 685 RDANRFHHFNNGECSCRDYW 704



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 63/497 (12%)

Query: 26  FDSDEFVA----NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAV 81
           FDS +F A    NS+V  Y   G   ++R+LFD + ER+VVSWN L S Y+    + EA 
Sbjct: 40  FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEAR 99

Query: 82  CFFKEMVLSGIRPNEFSLSSMIN-----ACAGSGDSLLGRKIH----GYSIKLG------ 126
             F+ M       N  S ++M+         G  +SL  R        +++  G      
Sbjct: 100 NVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG 155

Query: 127 --------YD----SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
                   YD     D+ ++  ++    + G +++A  +F ++   ++V+W  +I G   
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215

Query: 175 HEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-----I 228
           +   D A KLF+ M + +E+     ++TS L          LG  L   +   E     +
Sbjct: 216 NNRVDVARKLFEVMPEKTEV-----SWTSML----------LGYTLSGRIEDAEEFFEVM 260

Query: 229 KSDPIVGV-GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
              P++    ++  + + G + +AR +F LM +++   W  +I  + + G ++EA  LF 
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M ++GV     +L ++L   A+  ++   +QVHA  V+  F+ D Y+ + L+  Y KCG
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            +  A  +F   S+ D++   S+I+ YA  GLGEEALK++ EM      P+     ++L 
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440

Query: 408 ACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDR 463
           AC+     E+G ++   +  KF         +  V+M  + G +D A      +   PD 
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500

Query: 464 GIVSWSAMIGGLAQHGR 480
            +  W A++G    H R
Sbjct: 501 TV--WGALLGACKTHSR 515



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 6/193 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C +   L  G QVH  +V   FD D +VA+ L+ MY KCG  + ++ +FD    + 
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           ++ WNS+ S Y      EEA+  F EM  SG  PN+ +L +++ AC+ +G    G +I  
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
               K      +   +  VDM  + G ++ A+ + + +   PD   W A++  C  H   
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516

Query: 179 DW----ALKLFQQ 187
           D     A KLF+ 
Sbjct: 517 DLAEVAAKKLFEN 529



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 145/341 (42%), Gaps = 61/341 (17%)

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           +   ++ G ++EAR  F  +  K + +WN ++SG+  NG   EA  LF  M         
Sbjct: 24  ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE------- 76

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
                  ++V S+                         N L+  Y K   + +A  +F+ 
Sbjct: 77  -------RNVVSW-------------------------NGLVSGYIKNRMIVEARNVFEL 104

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               ++V+ T+M+  Y Q G+  EA  L+  M +R    +    + +     +    ++ 
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           ++++  +     + D  A  +++    + G +D+A   F E+ +R +V+W+ MI G  Q+
Sbjct: 161 RKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
            R   A ++F  M E       ++  S+L     +G + +A+  FE M       PM+  
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPV 265

Query: 539 YAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            AC  MI   G  G+  +A  + D M  + NA+ W  ++ A
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-WRGMIKA 305



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 59/232 (25%)

Query: 425 IIKFGFMSDTFAGNSL-VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
           I++  +++ T    S  ++  ++ G I++A + F  +  + I SW++++ G   +G  KE
Sbjct: 7   ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66

Query: 484 ALQMFGQMLEDGVLP---------------------------NHITLVSVLCACNHAGLV 516
           A Q+F +M E  V+                            N ++  +++      G+V
Sbjct: 67  ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126

Query: 517 AEAKHHFESMEKK------------------------FGIQPMQEHYAC--MIDILGRAG 550
            EA+  F  M ++                        + + P+++  A   MI  L R G
Sbjct: 127 GEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG 186

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           +  EA  + D M  + N   W  ++   R    V+V    A  LF + PEK+
Sbjct: 187 RVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKT 233


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/749 (34%), Positives = 389/749 (51%), Gaps = 60/749 (8%)

Query: 26  FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
           F S   +    +  +A+ G    +R +FD +  ++V SWN++ + Y H     EA   F 
Sbjct: 12  FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           +M                                        + +  S N LV  Y K G
Sbjct: 72  KMP---------------------------------------ERNTISWNGLVSGYVKNG 92

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            + +A  VF  +   ++VSW +++ G V     D A  LF +M       N+ ++T  L 
Sbjct: 93  MISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEK----NVVSWTVMLG 148

Query: 206 ACAGMELKELGRQLHCS-LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
                 L E GR      L  M    D +    ++      G + EAR IF  MP++N++
Sbjct: 149 G-----LIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVV 203

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV-HAL 323
           AW  +ISG+  N     A  LF  M  +    ++ T + +LK       I    ++  A+
Sbjct: 204 AWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAELFKAM 259

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
            VK          N +I  +G  G V  A  +F +    D    +++I  Y + G   EA
Sbjct: 260 PVKPV-----AACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEA 314

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
           L L+  MQ   + P+     S+L+ C +L++ + G+QVH  +++  F  D +  + L+ M
Sbjct: 315 LALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITM 374

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           Y KCG +    R F     + IV W+++I G AQHG G++AL++F +M   G  P+ IT 
Sbjct: 375 YIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITF 434

Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
           + VL AC + G V E    FESM+ K+ +    EHYACM+D+LGRAGK  EAM L++ MP
Sbjct: 435 IGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMP 494

Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
            +A+A VWGALL A R +KN+++ + AA+ L  +EP  +  ++LLSN+YAS   W +VA+
Sbjct: 495 VEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAE 554

Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFT-VGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           +R+ M+   + K PG SWIEV +KV+ FT  G  SH   + I  KL+++   L +AGY P
Sbjct: 555 LRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCP 614

Query: 683 MVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFIS 742
                +HDV+E +K   L HHSEK+AVA+GL+  P G  IRV KNLR+C DCH++ + I+
Sbjct: 615 DGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIA 674

Query: 743 KIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           ++  REII+RD NRFHHF++G CSC  +W
Sbjct: 675 QVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 16/252 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L  C S   L  G QVH  +V + FD D +V++ L+ MY KCG+ +  +R+FD    + 
Sbjct: 336 ILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKD 395

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V WNS+ + Y    F E+A+  F EM  SG  P+E +   +++AC  +G    G +I  
Sbjct: 396 IVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIF- 454

Query: 121 YSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
            S+K  Y  D  + +   +VD+  + G L +A+ + +++    D + W A+++ C  H++
Sbjct: 455 ESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKN 514

Query: 178 NDW---ALKLFQQMKSSEINP-----NMFTYTSALKACA----GMELKELGRQLHCSLIK 225
            D    A K   Q++ S   P     N++   S  K  A     M  + + +   CS I+
Sbjct: 515 LDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIE 574

Query: 226 MEIKSDPIVGVG 237
           ++ K     G G
Sbjct: 575 VDNKVHMFTGGG 586


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/615 (38%), Positives = 346/615 (56%), Gaps = 38/615 (6%)

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           P+  +Y    +        +LG+Q H  ++   ++ +  +   +V MYA  G +D A ++
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASL---FPWMYREGVGFDQTTLSTVLKSVASF 311
           F  +   + + +N +I  + ++G           +  M+  G+  D  TL  VLKS A  
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194

Query: 312 QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL------- 364
             + + + VH   ++   E D Y+  SLID Y KCG + DA K+F +    D+       
Sbjct: 195 SRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALI 254

Query: 365 ------------------------VACTSMITAYAQFGLGEEALKLYLEM-QD-REINPD 398
                                   V+ T+MI+ Y Q G  E+AL L+ EM QD  E+ P+
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPN 314

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
                S+L ACA  +A E+G+++H      G   ++    +L  MYAKC S+ +A   F 
Sbjct: 315 WVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFD 374

Query: 459 EIPDRG--IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
            I   G  +++W+ MI   A HG G EA+ +F  ML  GV P+ +T + +L  C+H+GL+
Sbjct: 375 MIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLI 434

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
               +HF  M     ++P  EHYAC++D+LGRAG+  EA EL+  MP QA  SVWGALL 
Sbjct: 435 DAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLA 494

Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
           A R ++N+E+ + AA  LF +EP+ S  +VLLSN+YA AGMW+ V K+R  +K   +KK 
Sbjct: 495 ACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKS 554

Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
           PG SWIE+  K + F   D+SH ++KEIY  L+ + + +  AGY+P     LHD+ E EK
Sbjct: 555 PGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEK 614

Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           E  L  HSEKLA+AFGL+ T PG  +RV KNLRIC DCH + +FISKI  REIIVRD+NR
Sbjct: 615 EYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNR 674

Query: 757 FHHFRNGSCSCGGYW 771
           FH F++GSCSCG YW
Sbjct: 675 FHCFKDGSCSCGDYW 689



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 155/331 (46%), Gaps = 38/331 (11%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           LG Q H  +V  G   + F+A  +V MYA  G+   +  +FD I   S + +NS+   Y 
Sbjct: 95  LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154

Query: 73  H---CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
                      +  +  M   G+  + F+L  ++ +CA      +GR +HG  +++G + 
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH-------------E 176
           D +   +L+DMY K G + DA  +F  +   D+ SWNA+IAG +               E
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274

Query: 177 HND---W---------------ALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELG 216
           H +   W               AL LF +M    SE+ PN  T  S L ACA     E G
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE--KNLIAWNIVISGHL 274
           R++H     + +  +  V   L  MYAKC S+ EAR  F ++ +  KNLIAWN +I+ + 
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
            +G  +EA S+F  M R GV  D  T   +L
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLL 425



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 180/411 (43%), Gaps = 52/411 (12%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           LG++ H   +  G   + F A  +V MYA  G+L+ AV VF  I++P  + +N++I    
Sbjct: 95  LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154

Query: 174 LH---EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
            H         L+ + +M    +  + FT    LK+CA +    +GR +H   +++ ++ 
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214

Query: 231 DPIVGVGLVDMYAKCGSMDEARM-------------------------------IFHLMP 259
           D  VG  L+DMY KCG + +AR                                +F  M 
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVASFQAIGVC 317
            +N+++W  +ISG+ QNG   +A  LF  M ++G  +  +  T+ +VL + A   A+   
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--ESSAVDLVACTSMITAYA 375
           +++H  +       +  +  +L   Y KC  + +A   F     +  +L+A  +MITAYA
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF 435
             G G EA+ ++  M    + PD+     LL+ C++    + G      +  F  M    
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG------LNHFNDMGTIH 448

Query: 436 AGNSLVNMYA-------KCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
           +    V  YA       + G + +A    S++P   G   W A++     H
Sbjct: 449 SVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 499



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 38/296 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDA----- 55
           VLK+C     + +G  VHG  +  G + D +V  SL+ MY KCG   D+R+LFD      
Sbjct: 187 VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRD 246

Query: 56  --------------------------IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                     +  R++VSW ++ S Y    F E+A+  F EM+ 
Sbjct: 247 MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQ 306

Query: 90  SG--IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
            G  ++PN  ++ S++ ACA S     GR+IH ++  +G   +     AL  MYAK  +L
Sbjct: 307 DGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSL 366

Query: 148 EDAVAVFKDIEH--PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +A   F  I     ++++WN +I     H     A+ +F+ M  + + P+  T+   L 
Sbjct: 367 VEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLS 426

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP 259
            C+   L + G   H + +      +P V     +VD+  + G + EA+ +   MP
Sbjct: 427 GCSHSGLIDAGLN-HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMP 481


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/672 (36%), Positives = 384/672 (57%), Gaps = 32/672 (4%)

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+ SG  P+     S++ +C    D   G  +HG  I+LG   D+++ NAL++MY+K  +
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 147 LEDA-VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
           LE+  V  F D +    +     I  C     +D   +L +++   + N ++        
Sbjct: 61  LEEGGVQRFCDSKMLGGIPEPREIGKC--SNSHDLPCELDERVAGIDQNGDL-------- 110

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK-------CGSMDEARMIFHLM 258
                       Q+   L ++             D+Y+K        GS+   R +F +M
Sbjct: 111 -----------NQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSL---RKVFEMM 156

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P++++++WN VISG+ QNG   +A  +   M    +  D  TLS+VL   A +  +   K
Sbjct: 157 PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGK 216

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           ++H  +++  +++D +I +SLID Y KC  V+D+ ++F      D ++  S+I    Q G
Sbjct: 217 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 276

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
           + +E LK + +M   +I P+    SS++ ACA+L+    GKQ+H +II+  F  + F  +
Sbjct: 277 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 336

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LV+MYAKCG+I  A   F ++    +VSW+AMI G A HG   +A+ +F +M  +GV P
Sbjct: 337 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 396

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           N++  ++VL AC+HAGLV EA  +F SM + + I P  EHYA + D+LGR G+ +EA E 
Sbjct: 397 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 456

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           +  M  +   SVW  LL A R++KN+E+ +  ++ LF ++P+    +VLLSNIY++AG W
Sbjct: 457 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 516

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
            +  K+R  M+D  +KK+P  SWIE+K+KV+ F  GD+SH     I   L  + + + + 
Sbjct: 517 KDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE 576

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GYV      LHDVEE +K  LL  HSE+LA+ FG+I+TP G TIRV KNLR+CVDCHT+ 
Sbjct: 577 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 636

Query: 739 EFISKIVSREII 750
           +FISKIV REI+
Sbjct: 637 KFISKIVGREIV 648



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 228/459 (49%), Gaps = 49/459 (10%)

Query: 50  RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS 109
           R++F+ +P+R +VSWN++ S        E+A+   +EM  + +RP+ F+LSS++   A  
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
            + L G++IHGY+I+ GYD+D+F  ++L+DMYAK   ++D+  VF  +   D +SWN++I
Sbjct: 210 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 269

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           AGCV +   D  LK FQQM  ++I PN  +++S + ACA +    LG+QLH  +I+    
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
            +  +   LVDMYAKCG++  AR IF  M   ++++W  +I G+  +G   +A SLF  M
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             EGV  +      VL + +           HA  V  A++      NS+   Y     +
Sbjct: 390 EVEGVKPNYVAFMAVLTACS-----------HAGLVDEAWK----YFNSMTQDYRIIPGL 434

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           E        ++  DL+          + G  EEA   Y  + D  I P   V S+LL AC
Sbjct: 435 E------HYAAVADLL---------GRVGRLEEA---YEFISDMHIEPTGSVWSTLLAAC 476

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI---- 465
                 E  ++V   +       +  A   L N+Y+  G   DA +    + D+G+    
Sbjct: 477 RVHKNIELAEKVSKKLFTVD-PQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 535

Query: 466 -VSW-------SAMIGGLAQH---GRGKEALQMFGQMLE 493
             SW        A + G   H    R  EAL++  + +E
Sbjct: 536 ACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQME 574



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 261/573 (45%), Gaps = 81/573 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK--------CGNFIDSRRL 52
           VLK+CT  KDL  G  VHG ++  G   D +  N+L+ MY+K           F DS+ L
Sbjct: 16  VLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQRFCDSKML 75

Query: 53  FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
              IPE   +           C    +  C   E V +GI  N   L+ M N        
Sbjct: 76  -GGIPEPREIG---------KCSNSHDLPCELDERV-AGIDQNG-DLNQMSNI------- 116

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
           L     +      G  SD++S       Y  +G+L     VF+ +   DIVSWN VI+G 
Sbjct: 117 LYQVNTYKKVFDEGKTSDVYSKKEKESYY--LGSLR---KVFEMMPKRDIVSWNTVISGN 171

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
             +  ++ AL + ++M ++++ P+ FT +S L   A       G+++H   I+    +D 
Sbjct: 172 AQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADV 231

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +G  L+DMYAKC  +D++  +F+++P+ + I+WN +I+G +QNG   E    F  M   
Sbjct: 232 FIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIA 291

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  +  + S+++ + A    + + KQ+H   +++ F+ + +I ++L+D Y KCG++  A
Sbjct: 292 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTA 351

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
             IF +    D+V+ T+MI  YA  G   +A+ L+  M+   + P+     ++L AC++ 
Sbjct: 352 RWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH- 410

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-----RGIVS 467
                                              G +D+A + F+ +        G+  
Sbjct: 411 ----------------------------------AGLVDEAWKYFNSMTQDYRIIPGLEH 436

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           ++A+   L + GR +EA +    M    + P      ++L AC     V +     E + 
Sbjct: 437 YAAVADLLGRVGRLEEAYEFISDM---HIEPTGSVWSTLLAACR----VHKNIELAEKVS 489

Query: 528 KK-FGIQPMQ-EHYACMIDILGRAGKFQEAMEL 558
           KK F + P     Y  + +I   AG++++A +L
Sbjct: 490 KKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 522


>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/587 (40%), Positives = 343/587 (58%), Gaps = 30/587 (5%)

Query: 194 NPNMFTYT-----------SALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           NPN  T             S +  C+  E K+L +Q+H  +++  +  DP     L+   
Sbjct: 21  NPNSITLNNDRYFANHPTLSLIDQCS--ETKQL-KQIHAQMLRTGLFFDPFSASRLITAA 77

Query: 243 A--KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-DQT 299
           A     S+D A+ +F  +P  NL  WN +I  +  +    ++  +F  M  +   F D+ 
Sbjct: 78  ALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKF 137

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           T   ++K+ +  + +   K  H + +K    SD +I+NSLI  Y KCG +    ++F   
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNX 197

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
              D+V+  SMITA+ Q G  EEAL+L+ EM+ + + P+      +L+ACA  S +E G+
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI------- 472
            VH +I +          N++++MY KCGS++DA R F ++P++ IVSW+ M+       
Sbjct: 258 WVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIG 317

Query: 473 -----GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
                 GLA HG GK+A+ +F +M ED V PN +T  ++LCAC+H GLV E +  F  ME
Sbjct: 318 EYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQME 377

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
             +G+ P  +HYACM+DILGRAG  +EA+EL++ MP    ASVWGALLGA  I++NV + 
Sbjct: 378 LVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLA 437

Query: 588 QHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDK 647
           + A   L  +EP     +VLLSNIYA AG WD V+ +R+ M+D  LKKEPG S IEV   
Sbjct: 438 EQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGI 497

Query: 648 VYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE-KEQLLYHHSEK 706
           V+ F VGD SH  +K+IYAKLDE+   L   GYVP     L  VEE + KEQ L+ HSEK
Sbjct: 498 VHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEK 557

Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
           LA+AFGLI+T     IR+ KNLR+C DCH+  + +SK+  REI++RD
Sbjct: 558 LAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRD 604



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 144/275 (52%), Gaps = 19/275 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KA +  ++LF G   HG+V+     SD F+ NSL+  YAKCG      R+F   P R 
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRD 201

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ + +V     EEA+  F+EM    ++PN  ++  +++ACA   D   GR +H 
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHS 261

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA---------- 170
           Y  +      +  +NA++DMY K G++EDA  +F  +   DIVSW  ++           
Sbjct: 262 YIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDA 321

Query: 171 --GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
             G  +H H   A+ LF +M+  ++ PN  T+T+ L AC+ + L E GR       +ME+
Sbjct: 322 AQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF---FNQMEL 378

Query: 229 KSDPIVGVG----LVDMYAKCGSMDEARMIFHLMP 259
               + GV     +VD+  + G ++EA  +   MP
Sbjct: 379 VYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMP 413



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 211/471 (44%), Gaps = 62/471 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           ++  C+  K L    Q+H  ++ TG   D F A+ L+   A     +   ++++FD IP 
Sbjct: 41  LIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH 97

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRK 117
            ++ +WN+L   Y       +++  F  M+  S   P++F+   +I A +   +   G+ 
Sbjct: 98  PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
            HG  IK+   SD+F  N+L+  YAK G L     VF +    D+VSWN++I   V    
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGC 217

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            + AL+LFQ+M++  + PN  T    L ACA     E GR +H  + +  I     +   
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNA 277

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ------------NGGDMEAASL 285
           ++DMY KCGS+++A+ +F  MPEK++++W  ++ G+ +            +G   +A +L
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIAL 337

Query: 286 FPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
           F  M  + V  +  T + +L           C   H   V    E      N +   YG 
Sbjct: 338 FSKMQEDKVKPNAVTFTNIL-----------CACSHVGLV----EEGRTFFNQMELVYG- 381

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
              V   VK +         AC  M+    + GL EEA++L  +M    + P + V  +L
Sbjct: 382 ---VLPGVKHY---------AC--MVDILGRAGLLEEAVELIEKM---PMAPAASVWGAL 424

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-----LVNMYAKCGSID 451
           L AC         +Q    +I+         GN      L N+YAK G  D
Sbjct: 425 LGACTIHENVVLAEQACSQLIELE------PGNHGAYVLLSNIYAKAGKWD 469


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/647 (38%), Positives = 379/647 (58%), Gaps = 37/647 (5%)

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L  A++VF+ I  P+ + WN +  G  L      ALKL+  M S  + PN FT+   LK+
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHL--------- 257
           CA  +  + G+Q+H  ++K+    D  V   L+ MYA+ G +++A+ +F           
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 258 ----------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                                 +P K++++WN +ISG+ + G   +A  LF  M +  V 
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D++T++TV+ + A   +I + +QVH+      F S+  IVN+LID Y KCG VE A ++
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            +  S  D+++  ++I  Y    L +EAL L+ EM      P+     S+L ACA+L A 
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324

Query: 416 EQGKQVHVHIIK----FGFMSDTFAGNSLVNMYAKCGSIDDADR-AFSEIPDRGIVSWSA 470
           + G+ +HV+I K        + +    SL++MYAKCG ID A + + S   +R + +W+A
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G A HGR   A  +F +M ++G+ P+ IT V +L AC+H+G++   ++ F SM + +
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
            I P  EHY CMID+LG +G F+EA E+++TMP + +  +W +LL A +I+ N+E+G+  
Sbjct: 445 NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE-PGMSWIEVKDKVY 649
           A+ L  IEPE   ++VLLSNIYA+AG W+ V K+R  + D  +KK+ PG S IE+   V+
Sbjct: 505 AKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVH 564

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            F +GD+ H +++EIY  L+E+  LL +AG+VP     L ++EE  KE  L HHSEKLA+
Sbjct: 565 EFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 624

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
           AFGLI+T PG  + + KNLR+C +CH + + ISKI  REII RD  R
Sbjct: 625 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 231/503 (45%), Gaps = 74/503 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRR--------- 51
           +LK+C   K    G Q+HG V+  GFD D +V  SL+ MYA+ G   D+++         
Sbjct: 81  LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140

Query: 52  ----------------------LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                                 +FD IP + VVSWN++ S Y      ++A+  FKEM+ 
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           + ++P+E +++++++ACA SG   LGR++H +    G+ S++   NAL+D+Y+K G +E 
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  + + + + D++SWN +I G         AL LFQ+M  S   PN  T  S L ACA 
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320

Query: 210 MELKELGRQLHCSLIK----MEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLI 264
           +   ++GR +H  + K    + + +   +   L+DMYAKCG +D A  +       ++L 
Sbjct: 321 LGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
            WN +I G   +G    A  +F  M + G+  D  T   +L + +    + + + +    
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI---- 436

Query: 325 VKTAFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
               F S   DY +   ++ YG                         MI      GL +E
Sbjct: 437 ----FRSMRQDYNITPKLEHYG------------------------CMIDLLGHSGLFKE 468

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           A ++   M    + PD  +  SLL AC      E G+     +IK     +  +   L N
Sbjct: 469 AEEMINTMP---MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE-PENPGSYVLLSN 524

Query: 443 MYAKCGSIDDADRAFSEIPDRGI 465
           +YA  G  ++  +  + + D+G+
Sbjct: 525 IYATAGKWNEVXKIRTLLNDKGM 547



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 242/546 (44%), Gaps = 77/546 (14%)

Query: 52  LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
           +F+ IPE + + WN +F  +        A+  +  M+  G+ PN F+   ++ +CA S  
Sbjct: 31  VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90

Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------ 159
              G++IHG+ +KLG+D D++   +L+ MYA+ G LEDA  VF    H            
Sbjct: 91  FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150

Query: 160 -------------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
                               D+VSWNA+I+G     +   AL+LF++M  + + P+  T 
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
            + + ACA     ELGRQ+H  +      S+  +   L+D+Y+KCG ++ A  +   +  
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
           K++I+WN +I G+       EA  LF  M R G   +  T+ ++L + A   AI + + +
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330

Query: 321 HALSVK----TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD--LVACTSMITAY 374
           H    K        +   +  SLID Y KCG ++ A ++  +SSA +  L    +MI  +
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQV-SDSSAFNRSLSTWNAMIFGF 389

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           A  G    A  ++  M+   I PD      LL+AC++    + G+ +      F  M   
Sbjct: 390 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI------FRSMRQD 443

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           +      N+  K                  +  +  MI  L   G  KEA +M   M  +
Sbjct: 444 Y------NITPK------------------LEHYGCMIDLLGHSGLFKEAEEMINTMPME 479

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF-GIQPMQE-HYACMIDILGRAGKF 552
              P+ +   S+L AC   G +       ES  KK   I+P     Y  + +I   AGK+
Sbjct: 480 ---PDGVIWCSLLKACKIHGNLELG----ESFAKKLIKIEPENPGSYVLLSNIYATAGKW 532

Query: 553 QEAMEL 558
            E  ++
Sbjct: 533 NEVXKI 538


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/684 (36%), Positives = 393/684 (57%), Gaps = 4/684 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL A     +L LGL VH   +  G  S+ +V +SLV MY+KC     + ++F+A+ ER+
Sbjct: 333  VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERN 392

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             V WN++   Y H     + +  F +M  SG   ++F+ +S+++ CA S D  +G + H 
Sbjct: 393  DVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHS 452

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              IK     ++F  NALVDMYAK G LEDA  +F+ +   D VSWN +I G V  E+   
Sbjct: 453  IIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESE 512

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A  LF +M S  I  +     S LKAC  +     G+Q+HC  +K  +      G  L+D
Sbjct: 513  AFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLID 572

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY+KCG +++AR +F  MPE ++++ N +I+G+ QN  + EA  LF  M  +GV   + T
Sbjct: 573  MYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPSEIT 631

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKE- 358
             +T++++    +++ +  Q H   +K  F S+ +Y+  SL+  Y     + +A  +F E 
Sbjct: 632  FATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSEL 691

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            SS   +V  T M++ ++Q G  EEALK Y EM+     PD     ++L  C+ LS+  +G
Sbjct: 692  SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREG 751

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
            + +H  I       D    N+L++MYAKCG +  + + F E+  R  +VSW+++I G A+
Sbjct: 752  RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAK 811

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G  ++AL++F  M +  ++P+ IT + VL AC+HAG V++ +  FE M  ++GI+   +
Sbjct: 812  NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            H ACM+D+LGR G  QEA + ++    + +A +W +LLGA RI+ +   G+ AAE L  +
Sbjct: 872  HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIEL 931

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP+ SS +VLLSNIYAS G W+    +R+ M+D  +KK PG SWI+V  + + F  GD+S
Sbjct: 932  EPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQS 991

Query: 658  HARSKEIYAKLDEVSDLLNKAGYV 681
            H+   +I   L+++ DL+     V
Sbjct: 992  HSDIGKIEMFLEDLYDLMKDDAVV 1015



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 186/580 (32%), Positives = 304/580 (52%), Gaps = 31/580 (5%)

Query: 14  GLQVHGIVVFT-----GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           GL    ++VF      G   D     +++  Y   G   D+R LF  +P   VV+WN + 
Sbjct: 240 GLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMI 299

Query: 69  SCYVH--CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLG 126
           S +    C+ +  A+ +F  M  S ++    +L S+++A     +  LG  +H  +IKLG
Sbjct: 300 SGHGKRGCEIV--AIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357

Query: 127 YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
             S+++  ++LV MY+K   +E A  VF+ +E  + V WNA+I G   +  +   ++LF 
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFM 417

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
            MKSS  N + FT+TS L  CA     E+G Q H  +IK ++  +  VG  LVDMYAKCG
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCG 477

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
           ++++AR IF  M +++ ++WN +I G++Q+  + EA  LF  M   G+  D   L++ LK
Sbjct: 478 ALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLK 537

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           +  +   +   KQVH LSVK   +   +  +SLID Y KCG +EDA K+F       +V+
Sbjct: 538 ACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVS 597

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             ++I  Y+Q  L EEA+ L+ EM  + +NP     ++++ AC    +   G Q H  II
Sbjct: 598 MNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQII 656

Query: 427 KFGFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEA 484
           K+GF S+  + G SL+ +Y     + +A   FSE+   + IV W+ M+ G +Q+G  +EA
Sbjct: 657 KWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA---- 540
           L+ + +M  DG LP+  T V+VL  C+             S+ +   I  +  H A    
Sbjct: 717 LKFYKEMRHDGALPDQATFVTVLRVCS----------VLSSLREGRAIHSLIFHLAHDLD 766

Query: 541 -----CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
                 +ID+  + G  + + ++ D M  ++N   W +L+
Sbjct: 767 ELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 173/578 (29%), Positives = 277/578 (47%), Gaps = 42/578 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL     + ++  G Q+H  ++  G + + +   +LV MYAKC    D++R+FD I + +
Sbjct: 166 VLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPN 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V W  LFS YV     EEAV  F+ M   G RP+  +  ++IN                
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINT--------------- 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y  +G L+DA  +F ++  PD+V+WN +I+G         
Sbjct: 271 --------------------YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIV 310

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ F  M+ S +     T  S L A   +   +LG  +H   IK+ + S+  VG  LV 
Sbjct: 311 AIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  M+ A  +F  + E+N + WN +I G+  NG   +   LF  M   G   D  T
Sbjct: 371 MYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++L + A    + +  Q H++ +K     + ++ N+L+D Y KCG +EDA +IF+   
Sbjct: 431 FTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMC 490

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+  ++I  Y Q     EA  L++ M    I  D    +S L AC N+    QGKQ
Sbjct: 491 DRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQ 550

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K G       G+SL++MY+KCG I+DA + FS +P+  +VS +A+I G +Q+  
Sbjct: 551 VHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL 610

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +EA+ +F +ML  GV P+ IT  +++ AC H          F     K+G     E+  
Sbjct: 611 -EEAVVLFQEMLTKGVNPSEITFATIVEAC-HKPESLTLGTQFHGQIIKWGFSSEGEYLG 668

Query: 541 CMIDILG---RAGKFQEAMELVDTMPFQANASVWGALL 575
             I +LG    + +  EA  L   +    +  +W  ++
Sbjct: 669 --ISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMM 704



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 276/553 (49%), Gaps = 37/553 (6%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L +G  VH   +  G DS+  + N++V +YAKC     + + F+++ E+ V +WNS+ S 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSM 134

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y       + +  F  +  + I PN+F+ S +++  A   +   GR+IH   IK+G + +
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
            +   ALVDMYAK   L DA  VF  I  P+ V W  + +G V     + A+ +F++M+ 
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
               P+   +                                   V +++ Y   G + +
Sbjct: 255 EGHRPDHLAF-----------------------------------VTVINTYISLGKLKD 279

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           AR++F  MP  +++AWN++ISGH + G ++ A   F  M +  V   ++TL +VL ++  
Sbjct: 280 ARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGI 339

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              + +   VHA ++K    S+ Y+ +SL+  Y KC  +E A K+F+     + V   +M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAM 399

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  YA  G   + ++L+++M+    N D F  +SLL+ CA     E G Q H  IIK   
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKL 459

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             + F GN+LV+MYAKCG+++DA + F  + DR  VSW+ +IGG  Q     EA  +F +
Sbjct: 460 TKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMR 519

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M   G++ +   L S L AC +   + + K     +  K G+  +    + +ID+  + G
Sbjct: 520 MNSCGIVSDGACLASTLKACTNVHGLYQGK-QVHCLSVKCGLDRVLHTGSSLIDMYSKCG 578

Query: 551 KFQEAMELVDTMP 563
             ++A ++  +MP
Sbjct: 579 IIEDARKVFSSMP 591



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 9/278 (3%)

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+ + K VH+ S+    +S+  + N+++D Y KC  V  A K F  S   D+ A  SM++
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFN-SLEKDVTAWNSMLS 133

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            Y+  G   + L+ ++ + +  I P+ F  S +L+  A  +  E G+Q+H  +IK G   
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +++ G +LV+MYAKC  + DA R F  I D   V W+ +  G  + G  +EA+ +F +M 
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
            +G  P+H+  V+V+      G + +A+  F  M       P    +  MI   G+ G  
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMP-----SPDVVAWNVMISGHGKRGCE 308

Query: 553 QEAMELVDTM---PFQANASVWGALLGAARIYKNVEVG 587
             A+E    M     ++  S  G++L A  I  N+++G
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/547 (41%), Positives = 315/547 (57%), Gaps = 35/547 (6%)

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
           E N+I WN ++SG  ++G   +A      M+ EG   D T +S  L +V     + V +Q
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQ 177

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC------------ 367
           +H   VK     D  +  +LID YGKCG  ++ V++F ESS +D+ +C            
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237

Query: 368 -----------------------TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
                                  TS++    Q G   EA+ L+ EMQ   I P+S     
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPC 297

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           +L A AN++A   G+  H   ++ GF  D + G++LV+MYAKCG + DA   F  +P R 
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRN 357

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
           +VSW+AMIGG A HG  + A+++F  M      P+ +T   VL AC+ AG   E + +F 
Sbjct: 358 VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFN 417

Query: 525 SMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNV 584
            M+ K GI P  EHYACM+ +LGRAGK  +A ++++ MPF+ +  +WG+LLG+ R++ NV
Sbjct: 418 EMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477

Query: 585 EVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEV 644
            + + AAE LF +EPE +  +VLLSNIYAS  MWD V ++R  MK   LKKE G SWIE+
Sbjct: 478 VLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEI 537

Query: 645 KDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHS 704
           K+KV+    GD SH     I  KL  ++  + + G+ P  +  LHDVEE EK+ +L  HS
Sbjct: 538 KNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHS 597

Query: 705 EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
           EKLAVA GLI+T  G  ++V KNLRIC DCH + +FIS    REI VRD NRFHHF++G 
Sbjct: 598 EKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGK 657

Query: 765 CSCGGYW 771
           CSC  YW
Sbjct: 658 CSCADYW 664



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 183/427 (42%), Gaps = 74/427 (17%)

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           G   D F A++L+  Y + G   DA +V   + H  +V W+A+IA    H   + A  L 
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 186 QQMKSSEINPNMFTY-----------------------------------TSALKACAGM 210
           ++M+S  + PN+ T+                                   + AL A   +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169

Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF----HL--------- 257
               +G QLH  ++K   + D  V   L+DMY KCG  DE   +F    H+         
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229

Query: 258 ----------------------MPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
                                   E N+++W  +++  +QNG D+EA  LF  M  EG+ 
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            +  T+  VL + A+  A+   +  H  S++  F  D Y+ ++L+D Y KCG V DA  I
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F+     ++V+  +MI  YA  G  E A++L+  MQ  +  PD    + +L AC+     
Sbjct: 350 FEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWT 409

Query: 416 EQGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP--DRGIVSWSAMI 472
           E+G+     +  K G          +V +  + G +DDA    +++P    G + W +++
Sbjct: 410 EEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCI-WGSLL 468

Query: 473 GGLAQHG 479
           G    HG
Sbjct: 469 GSCRVHG 475



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 186/462 (40%), Gaps = 117/462 (25%)

Query: 25  GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
           G   D FVA+SL+  Y + G   D+R + D +P R+VV W++L + +      E A    
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 85  KEMVLSGIRPNEFSLSSMIN------------------------------ACAGS----- 109
           + M   G+ PN  + + +++                              +CA S     
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI------- 162
           GD  +G ++HGY +K G   D   A AL+DMY K G  ++ V VF +  H D+       
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229

Query: 163 ----------------------------VSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
                                       VSW +++A CV +  +  A+ LF++M+S  I 
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
           PN  T    L A A +     GR  HC  ++     D  VG  LVDMYAKCG + +ARMI
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F  MP +N+++WN +I G+  +G    A  LF  M       D  T + VL         
Sbjct: 350 FEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVL--------- 400

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-------SSAVDLVAC 367
           G C Q                           G  E+    F E       S  ++  AC
Sbjct: 401 GACSQA--------------------------GWTEEGRSYFNEMQHKHGISPRMEHYAC 434

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
             M+T   + G  ++A  +  +M      PD  +  SLL +C
Sbjct: 435 --MVTLLGRAGKLDDAYDIINQM---PFEPDGCIWGSLLGSC 471



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 141/294 (47%), Gaps = 36/294 (12%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP---- 57
           L A     D+ +G Q+HG VV  G   D  VA +L+ MY KCG   +  R+FD       
Sbjct: 163 LSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDV 222

Query: 58  -------------------------------ERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
                                          E +VVSW S+ +C V      EAV  F+E
Sbjct: 223 ASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFRE 282

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M   GI PN  ++  ++ A A     + GR  H +S++ G+  D++  +ALVDMYAK G 
Sbjct: 283 MQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGR 342

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           + DA  +F+ + + ++VSWNA+I G  +H   + A++LF+ M+SS+  P++ T+T  L A
Sbjct: 343 VRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGA 402

Query: 207 CAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           C+     E GR     +  K  I         +V +  + G +D+A  I + MP
Sbjct: 403 CSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMP 456



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A  +   L  G   H   +  GF  D +V ++LV MYAKCG   D+R +F+A+P R+
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRN 357

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
           VVSWN++   Y      E AV  F+ M  S  +P+  + + ++ AC+ +G +  GR   +
Sbjct: 358 VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFN 417

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               K G    M     +V +  + G L+DA  +   +   PD   W +++  C +H
Sbjct: 418 EMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVH 474



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 78/327 (23%)

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           D ++ +SL+ AY + G   DA  +        +V  +++I A+A  G  E A  L   M+
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113

Query: 392 DREINP-----------------------------------DSFVCSSLLNACANLSAYE 416
              + P                                   D+   S  L+A  ++    
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID------------------------- 451
            G+Q+H +++K G   D     +L++MY KCG  D                         
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233

Query: 452 ------DADRAFSEIPDRGI----VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
                 +A R F E   RGI    VSW++++    Q+GR  EA+ +F +M  +G+ PN +
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293

Query: 502 TLVSVLCA-CNHAGLVAEAKHHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMEL 558
           T+  VL A  N A L+     H  S+ K F      + Y  + ++D+  + G+ ++A  +
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGF----HHDIYVGSALVDMYAKCGRVRDARMI 349

Query: 559 VDTMPFQANASVWGALLGAARIYKNVE 585
            + MP++ N   W A++G   ++   E
Sbjct: 350 FEAMPYR-NVVSWNAMIGGYAMHGEAE 375



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 4/154 (2%)

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD  +  S L +C   SA    + +H      G   D F  +SL++ Y + G+  DA   
Sbjct: 21  PDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSV 77

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
              +P R +V WSA+I   A HG  + A  +  +M  DGV PN IT   ++   N +G  
Sbjct: 78  LDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRA 137

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
            +A      M  + G  P     +C +  +G  G
Sbjct: 138 RDAVLALVRMHGE-GFLPDATGVSCALSAVGDVG 170


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/690 (35%), Positives = 385/690 (55%), Gaps = 6/690 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++KA     D++ G Q+HG V+  G   D  V NSL+ MY KCG   D+ ++F+ +PE  
Sbjct: 115 LIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVD 174

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VSWN++ S +        ++ FF+ MV   GI PN  +  S I +C+       GR+IH
Sbjct: 175 LVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIH 234

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS-----WNAVIAGCVL 174
           G  +K G D + +  ++L++MY K G++++A  +F  I   D V      WN +I+G V 
Sbjct: 235 GVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVS 294

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           +     AL LF +M    I P+  T  S    C+       G+Q+H  + K  +K++  V
Sbjct: 295 NGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRV 354

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+DMY KCG M     IF      NLI W+ VIS   Q+G   +A  LF     E  
Sbjct: 355 ETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDG 414

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D   L  VL++ +S        Q+H L+ K  F SD ++ ++L+D Y KC  +  + K
Sbjct: 415 LADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKK 474

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F   S  DLV+  ++I+ YAQ    +EALK + +MQ  EI P++   + +L+ CA+LS 
Sbjct: 475 VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSV 534

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
               K+VH ++I+ G  S     NSL+  YAKCG I+ +   F ++P+R  VSW+++I G
Sbjct: 535 MTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILG 594

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
           +  H R  E + +F +M+  G+ P+H+T  ++L AC+HAG V E   +F+SM + F ++P
Sbjct: 595 MGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKP 654

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
             E Y CM+D+LGRAG   +A +L+  MP   +  +WG+LLG+ + + +  + +  A  +
Sbjct: 655 QLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHI 714

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
           F + P      VLL+N+Y + G     +KVR  +KD  LKK+PG SWIEV +  + F  G
Sbjct: 715 FKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAG 774

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMV 684
           DRSH++S EIYA ++ ++  + +AGY+P +
Sbjct: 775 DRSHSQSDEIYAAVESLTTEIKRAGYIPQI 804



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 275/525 (52%), Gaps = 10/525 (1%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFS-LSSMINACAGSGDSLLGRKI 118
           SV   N++   Y    F ++A+  + +M+  G++  EF     +I A  G  D   GR+I
Sbjct: 72  SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQI 131

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG+ +KLG   D+   N+L+ MY K G +EDAV +F+ +   D+VSWN +I+G       
Sbjct: 132 HGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDY 191

Query: 179 DWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
             +L  F+ M     I PN     S++ +C+ ++    GR++H  ++K  +  +  +   
Sbjct: 192 TRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSS 251

Query: 238 LVDMYAKCGSMDEARMIFHLMPEK-----NLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
           L++MY KCGS+  A  IF+ + +K     N + WN++ISG++ NG   +A  LF  M   
Sbjct: 252 LIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVW 311

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
           G+  D +T+ ++    +    I   KQ+H L  K   +++  +  +L+D Y KCG +   
Sbjct: 312 GIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTG 371

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           +KIF+ S   +L+  +++I+  AQ G   +AL+L+ E +  +   DS +  ++L AC++L
Sbjct: 372 LKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSL 431

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
           +   +G Q+H    K GF+SD F G++LV++YAKC  +  + + F  +  + +VSW+A+I
Sbjct: 432 TLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALI 491

Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFG 531
            G AQ     EAL+ F  M  + + PN +T+  +L  C H  ++   K  H   + +  G
Sbjct: 492 SGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLG 551

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
              +  +   +I    + G    ++   + MP + + S    +LG
Sbjct: 552 STVLVSN--SLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILG 594


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/589 (38%), Positives = 335/589 (56%), Gaps = 37/589 (6%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCG---SMDEARMIFHLMPEKNLIAWNIVISGH 273
           +QLH  L+K    + P+  + L  + + C    S   A++IF L+    +  WN  +   
Sbjct: 32  KQLHAHLLK---TNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSF 88

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            +     +A SLF  +    +  D  T S VLK+ +    +   K VH    K   +S+ 
Sbjct: 89  AEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNM 148

Query: 334 YIVNSLIDAYGKCGHV-------------------------------EDAVKIFKESSAV 362
           ++ N ++  Y  CG +                               E A K+F E    
Sbjct: 149 FLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPER 208

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           ++ + TSMI  YAQ G  +EA+ L+LEM+D  + P+     ++L ACA++     G+++H
Sbjct: 209 NVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIH 268

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
               + G+  +    N+L++MY KCG ++DA R F  + +R +VSWSAMI GLA HGR +
Sbjct: 269 DFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAE 328

Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
           +AL +F +M+  GV PN +T + +L AC+H G+V + + +F SM + +GI P  EHY CM
Sbjct: 329 DALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCM 388

Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
           +D+  RAG  QEA E +  MP   N  VWGALLG  +++KN+++ + A   L  ++P   
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLND 448

Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
             +V+LSNIYA AG W++VA+VR+ M+D  +KK PG S I V+  VY F  GD +H +++
Sbjct: 449 GYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTE 508

Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
           EI+   +++   +   GYVP     L D+EE +KE+ LY HSEKLAV FGLI T PG  I
Sbjct: 509 EIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVI 568

Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           R+ KNLR+C DCH + + IS + +REI+VRD NRFH F+NGSCSCG YW
Sbjct: 569 RIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 159/305 (52%), Gaps = 33/305 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+   D+  G  VHG V   G  S+ F+ N +V +YA CG    +R++FD +P+R 
Sbjct: 119 VLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRD 178

Query: 61  VVSWN-------------------------------SLFSCYVHCDFLEEAVCFFKEMVL 89
           V++WN                               S+   Y  C   +EA+  F EM  
Sbjct: 179 VITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +G+ PNE ++ +++ ACA  G+ +LGR+IH +S + GY+ ++   N L+DMY K G LED
Sbjct: 239 AGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F ++E   +VSW+A+IAG   H   + AL LF +M ++ + PN  T+   L AC+ 
Sbjct: 299 ACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSH 358

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMP-EKNLIAWN 267
           M + E GR+   S+ +       I   G +VD++++ G + EA      MP   N + W 
Sbjct: 359 MGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWG 418

Query: 268 IVISG 272
            ++ G
Sbjct: 419 ALLGG 423



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 219/506 (43%), Gaps = 77/506 (15%)

Query: 45  NFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMIN 104
           +F  ++ +F  +    V  WN+    +   D   +A+  F  +    I P+ ++ S ++ 
Sbjct: 62  SFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLK 121

Query: 105 ACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS 164
           AC+   D   G+ +HGY  KLG  S+MF  N +V +YA  G +  A  VF  +   D+++
Sbjct: 122 ACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVIT 181

Query: 165 WNAVIAGCV--------------LHEHN--DW---------------ALKLFQQMKSSEI 193
           WN +IA  V              + E N   W               A+ LF +M+ + +
Sbjct: 182 WNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGL 241

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            PN  T  + L ACA M    LGR++H    +   + +  V   L+DMY KCG +++A  
Sbjct: 242 LPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACR 301

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           IF  M E+ +++W+ +I+G   +G   +A +LF  M   GV  +  T   +L + +    
Sbjct: 302 IFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGM 361

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   ++  A   +      DY +   I+ YG                         M+  
Sbjct: 362 VEKGRKYFASMTR------DYGIVPRIEHYG------------------------CMVDL 391

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
           +++ GL +EA +  + M    I P+  V  +LL  C      +  ++   H+ K   ++D
Sbjct: 392 FSRAGLLQEAHEFIMNM---PIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLND 448

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI---VSWSAM---------IGGLAQHGRG 481
            +    L N+YA+ G  +D  R    + DRG+     WS++         + G   H + 
Sbjct: 449 GYY-VVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQT 507

Query: 482 KEALQMFGQMLEDGVLPNHITLVSVL 507
           +E  Q + ++L+   L  ++   SV+
Sbjct: 508 EEIFQTWEKLLQRMKLKGYVPNTSVV 533



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 195/403 (48%), Gaps = 35/403 (8%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +++H + +K          + +  + A   +   A  +F+ ++  ++  WN  +      
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           +    A+ LF +++  +I+P+ +T +  LKAC+ +     G+ +H  + K+ ++S+  + 
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS------------------------ 271
             +V +YA CG +  AR +F  MP++++I WNI+I+                        
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 272 -------GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
                  G+ Q G   EA  LF  M   G+  ++ T+  VL + A    + + +++H  S
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
            ++ +E +  + N+LID Y KCG +EDA +IF       +V+ ++MI   A  G  E+AL
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNM 443
            L+ +M +  + P++     +L+AC+++   E+G++    + + +G +        +V++
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDL 391

Query: 444 YAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLAQHGRGKEA 484
           +++ G + +A      +P    G+V W A++GG   H   K A
Sbjct: 392 FSRAGLLQEAHEFIMNMPIAPNGVV-WGALLGGCKVHKNIKLA 433



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 161/338 (47%), Gaps = 22/338 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC    +L LG ++H     +G++ +  V N+L+ MY KCG   D+ R+FD + ER+
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW+++ +        E+A+  F +M+ +G++PN  +   +++AC+  G    GRK   
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370

Query: 121 YSIK-LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
              +  G    +     +VD++++ G L++A     ++   P+ V W A++ GC +H++ 
Sbjct: 371 SMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNI 430

Query: 179 DWALKLFQQM-KSSEINPNMFTYTSALKACAGM--ELKELGRQLHCSLIKMEIKSDPIVG 235
             A +  + + K   +N   +   S + A AG   ++  + + +    +K       I+ 
Sbjct: 431 KLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMV 490

Query: 236 VGLV-DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG----DMEAASLFPWMY 290
            G+V +  A   +  +   IF    +   +   + + G++ N      DME      ++Y
Sbjct: 491 EGVVYNFVAGDDTHPQTEEIFQTWEK---LLQRMKLKGYVPNTSVVLLDMEEDQKEKFLY 547

Query: 291 REG------VGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           R         G  +TT  TV++ + + +   VC+  HA
Sbjct: 548 RHSEKLAVVFGLIKTTPGTVIRIMKNLR---VCEDCHA 582


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/579 (39%), Positives = 343/579 (59%), Gaps = 3/579 (0%)

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N   Y + L++C        GRQLH  L+      D ++   LVD+YA CG +  AR +F
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 256 HLMPEK-NLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQA 313
             MP + N+  WN++I  + ++G    A  L+  M   G +  D  T   VLK+ A+   
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           +   ++VH   ++T + +D ++   LID Y KCG +++A  +F +++  D     SMI A
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
             Q G   EAL L   M    I P      S ++A A  SA  +G+++H +  + GF S 
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML- 492
                SL++MYAK G +  A   F ++  R ++SW+AMI G   HG    A ++F +M  
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           E  V+P+HIT V VL ACNH G+V EAK  F+ M   + I+P  +HY C++D+LG +G+F
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
           +EA +++  M  + ++ +WGALL   +I+KNVE+ + A + L  +EPE +  +VLLSNIY
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486

Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
           A +G W+  A+VR+ M +  LKK    SWIE+K K + F VGD SH RS +IY +L+ + 
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLE 546

Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
            L+++ GYVP      H+VE+ EK  +++ HSE+LA+AFGLI+TPP   + V KNLR+C 
Sbjct: 547 GLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCE 606

Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           DCH   + IS+I  REII+RDVNR+HHF NG CSC  +W
Sbjct: 607 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 233/521 (44%), Gaps = 59/521 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           +L++C   + +  G Q+H  ++ +G   D  +A  LV +YA CG+   +RR+FD +P + 
Sbjct: 74  ILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQG 133

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI 118
           +V  WN L   Y      E A+  ++ M+  G ++P+ F+   ++ ACA   D   GR++
Sbjct: 134 NVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREV 193

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   ++  + +D+F    L+DMYAK G +++A AVF D    D   WN++IA C  +   
Sbjct: 194 HDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRP 253

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
             AL L + M +  I P + T  SA+ A A       GR+LH    +    S   +   L
Sbjct: 254 AEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSL 313

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFD 297
           +DMYAK G +  A ++F  +  + LI+WN +I G   +G    A  LF  M  E  V  D
Sbjct: 314 LDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPD 373

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             T   VL +      +   K+V  L V   + +        L+D  G  G        F
Sbjct: 374 HITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGR-------F 426

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
           KE+S V                           ++   + PDS +  +LLN C     ++
Sbjct: 427 KEASDV---------------------------IKGMLVKPDSGIWGALLNGC---KIHK 456

Query: 417 QGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI-----VSWS 469
             +   + + K   +    AGN   L N+YA+ G  ++A R    + +RG+      SW 
Sbjct: 457 NVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWI 516

Query: 470 AMIG-------GLAQHGRG----KEALQMFGQMLEDGVLPN 499
            + G       G A H R     +E  ++ G + + G +P+
Sbjct: 517 ELKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPD 557



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 191/391 (48%), Gaps = 9/391 (2%)

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           N  + ++++ +C  S     GR++H   +  G   D   A  LVD+YA  G++  A  VF
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 155 KDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMEL 212
            ++ +  ++  WN +I         + A++L++ M +   + P+ FTY   LKACA +  
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              GR++H  +++    +D  V  GL+DMYAKCG MDEA  +F+    ++   WN +I+ 
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
             QNG   EA +L   M  EG+     TL + + + A   A+   +++H    +  F S 
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ- 391
           D +  SL+D Y K G V  A  +F++    +L++  +MI  +   G  + A +L+  M+ 
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMYAKCGSI 450
           + ++ PD      +L+AC +    ++ K+V   ++    +  T    + LV++    G  
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 451 DDADRAFSEI---PDRGIVSWSAMIGGLAQH 478
            +A      +   PD GI  W A++ G   H
Sbjct: 427 KEASDVIKGMLVKPDSGI--WGALLNGCKIH 455



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 2/210 (0%)

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           ++ +  +T+L+S    +A+   +Q+HA  + +    D  +   L+D Y  CGHV  A ++
Sbjct: 66  YNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRV 125

Query: 356 FKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACANLS 413
           F E  +  ++     +I AYA+ G  E A++LY  M     + PD+F    +L ACA L 
Sbjct: 126 FDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALL 185

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
               G++VH  +++  + +D F    L++MYAKCG +D+A   F++   R    W++MI 
Sbjct: 186 DLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIA 245

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
              Q+GR  EAL +   M  +G+ P   TL
Sbjct: 246 ACGQNGRPAEALTLCRNMAAEGIAPTIATL 275


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/690 (35%), Positives = 394/690 (57%), Gaps = 8/690 (1%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           + N+++ M  + G    + R+F  +PER V SWN +   Y    FLEEA+  +  M+ +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
           +RP+ ++   ++  C G  D  +GR++H + ++ G+  ++   NALV MYAK G++  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            VF  +   D +SWNA+IAG   +   +  L+LF  M  +E+ PN+ T TS   A +GM 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA-SGM- 310

Query: 212 LKELG--RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           L E+G  +++H   +K     D      L+ MY   G M +A  IF  M  K+ ++W  +
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ISG+ +NG   +A  ++  M    V  D  T+++ L + A    + V  ++H L+    F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
                + N+L++ Y K  H++ A+++FK  +  D+V+ +SMI  +       EAL  Y  
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEAL-YYFR 489

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
                + P+S    + L+ACA   A   GK++H ++++ G  S+ +  N+L+++Y KCG 
Sbjct: 490 YMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
              A   FS   ++ +VSW+ M+ G   HG G  AL +F QM+E G  P+ +T V++LCA
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCA 609

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+ AG+V +    F  M +KF I P  +HYACM+D+L R GK  EA  L++ MP + +A+
Sbjct: 610 CSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAA 669

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWGALL   RI+++VE+G+ AA+++  +EP   + HVLL ++Y  AG W  VA+VR+ M+
Sbjct: 670 VWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMR 729

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           +  L+++ G SW+EVK   + F   D SH + KEI   L  + + +   G+ P VE+ L 
Sbjct: 730 EKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP-VES-LE 787

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
           D E SE + +L  HSE+LAVAFGLI T PG
Sbjct: 788 DKEVSE-DDILCGHSERLAVAFGLINTTPG 816



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 273/532 (51%), Gaps = 6/532 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C    D  +G +VH  V+  GF  +  V N+LV MYAKCG+ + +R++FD +    
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SWN++ + +      E  +  F  M+ + ++PN  +++S+  A     +    +++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K G+  D+   N+L+ MY  +G + DA  +F  +E  D +SW A+I+G   +   D 
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL+++  M+   ++P+  T  SAL ACA +   ++G +LH            +V   L++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAK   +D+A  +F  M EK++++W+ +I+G   N    EA   F +M    V  +  T
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVT 501

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  A+   K++HA  ++    S+ Y+ N+L+D Y KCG    A   F   S
Sbjct: 502 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS 561

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+V+   M++ +   GLG+ AL L+ +M +   +PD     +LL AC+      QG +
Sbjct: 562 EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWE 621

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQH 478
           + H+   KF  + +      +V++ ++ G + +A    + +P +   + W A++ G   H
Sbjct: 622 LFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 681

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKK 529
            R  E  ++  +++ + + PN +    +LC     AG  A+     ++M +K
Sbjct: 682 -RHVELGELAAKVILE-LEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/637 (37%), Positives = 360/637 (56%), Gaps = 38/637 (5%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+  YA + ++  A  VF +I   +++  N +I   V +      +K+F  M    + P+
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
            +T+   LKAC+      +GR++H S  K+ + S   VG GLV MY KCG + EAR++  
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M  +++++WN ++ G+ QN    +A  +   M    +  D  T++++L +V++     V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
                 + VK  F                        K+ K+S    LV+   MI  Y +
Sbjct: 260 ------MYVKDMF-----------------------FKMGKKS----LVSWNVMIGVYMK 286

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             +  EA++LY  M+     PD+   +S+L AC + SA   GK++H +I +   + +   
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            N+L++MYAKCG ++ A   F  +  R +VSW+AMI      GRG +A+ +F ++ + G+
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
           +P+ I  V+ L AC+HAGL+ E +  F+ M   + I P  EH ACM+D+LGRAGK +EA 
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
             +  M  + N  VWGALLGA R++ + ++G  AA+ LF + PE+S  +VLLSNIYA AG
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W+ V  +R  MK   LKK PG S +EV   ++TF VGDRSH +S EIY +LD +   + 
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP-----PGATIRVKKNLRIC 731
           + GYVP  E+ LHDVEE +KE  L  HSEKLA+ F L+ T         TIR+ KNLRIC
Sbjct: 587 ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRIC 646

Query: 732 VDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
            DCH + + IS+I SREII+RD NRFH FR G CSC 
Sbjct: 647 GDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 263/552 (47%), Gaps = 80/552 (14%)

Query: 17  VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
           VH  ++      +  +   L+  YA   +   +R++FD IPER+V+  N +   YV+  F
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
             E V  F  M    +RP+ ++   ++ AC+ SG  ++GRKIHG + K+G  S +F  N 
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           LV MY K G L +A  V  ++   D+VSWN+++ G   ++  D AL++ ++M+S +I+ +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
             T  S L A +    + +                         MY K         +F 
Sbjct: 241 AGTMASLLPAVSNTTTENV-------------------------MYVKD--------MFF 267

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            M +K+L++WN++I  +++N   +EA  L+  M  +G   D  ++++VL +     A+ +
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
            K++H    +     +  + N+LID Y KCG +E A  +F+   + D+V+ T+MI+AY  
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
            G G +A+ L+ ++QD  + PDS    + L AC++    E+G+        F  M+D + 
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC------FKLMTDHY- 440

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
                                 +I  R +   + M+  L + G+ KEA +    M    +
Sbjct: 441 ----------------------KITPR-LEHLACMVDLLGRAGKVKEAYRFIQDM---SM 474

Query: 497 LPNHITLVSVLCACN-HA----GLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAG 550
            PN     ++L AC  H+    GL+A         +K F + P Q  +Y  + +I  +AG
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLA--------ADKLFQLAPEQSGYYVLLSNIYAKAG 526

Query: 551 KFQEAMELVDTM 562
           +++E   + + M
Sbjct: 527 RWEEVTNIRNIM 538



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 52/370 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+    + +G ++HG     G  S  FV N LV MY KCG   ++R + D +  R 
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNSL   Y      ++A+   +EM            S  I+  AG+  SLL    + 
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREME-----------SVKISHDAGTMASLLPAVSNT 254

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +  + Y  DMF                     FK +    +VSWN +I   + +     
Sbjct: 255 TTENVMYVKDMF---------------------FK-MGKKSLVSWNVMIGVYMKNAMPVE 292

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++L+ +M++    P+  + TS L AC       LG+++H  + + ++  + ++   L+D
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG +++AR +F  M  +++++W  +IS +  +G   +A +LF  +   G+      
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL------ 406

Query: 301 LSTVLKSVASFQAIGVCKQVHALSV-KTAFE--SDDYIVNS-------LIDAYGKCGHVE 350
              V  S+A    +  C     L   ++ F+  +D Y +         ++D  G+ G V+
Sbjct: 407 ---VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463

Query: 351 DAVKIFKESS 360
           +A +  ++ S
Sbjct: 464 EAYRFIQDMS 473



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 175/361 (48%), Gaps = 35/361 (9%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           R +H  +I  +++ +  +GV L+  YA    +  AR +F  +PE+N+I  N++I  ++ N
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   E   +F  M    V  D  T   VLK+ +    I + +++H  + K    S  ++ 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N L+  YGKCG + +A  +  E S  D+V+  S++  YAQ    ++AL++  EM+  +I+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
            D+   +SLL A +N +        +V  +K              +M+ K G        
Sbjct: 239 HDAGTMASLLPAVSNTTTE------NVMYVK--------------DMFFKMGK------- 271

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
                 + +VSW+ MIG   ++    EA++++ +M  DG  P+ +++ SVL AC     +
Sbjct: 272 ------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325

Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
           +  K     +E+K  I  +    A +ID+  + G  ++A ++ + M  +   S W A++ 
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENA-LIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMIS 383

Query: 577 A 577
           A
Sbjct: 384 A 384



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 17/341 (4%)

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           Q T+  + + + ++  I   + VH+  +      +  +   L+ AY     V  A K+F 
Sbjct: 39  QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFD 98

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           E    +++    MI +Y   G   E +K++  M    + PD +    +L AC+       
Sbjct: 99  EIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+++H    K G  S  F GN LV+MY KCG + +A     E+  R +VSW++++ G AQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL--VAEAKHHFESMEKKFGIQPM 535
           + R  +AL++  +M    +  +  T+ S+L A ++     V   K  F  M KK  +   
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVS-- 276

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMP---FQANASVWGALLGAARIYKNVEVGQHAAE 592
              +  MI +  +     EA+EL   M    F+ +A    ++L A      + +G+   +
Sbjct: 277 ---WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK---K 330

Query: 593 MLFAIEPEKSSTHVLLSN----IYASAGMWDNVAKVRRFMK 629
           +   IE +K   ++LL N    +YA  G  +    V   MK
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/656 (35%), Positives = 360/656 (54%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           +++H   I      D F  N L+           +  +F   + P+I  +N +I G V +
Sbjct: 30  KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                 L LF  ++   +N + FT+   LKAC     ++LG  LH  ++K     D    
Sbjct: 90  HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ +Y+  G +++A  +F  +PE++++ W  + SG+   G   EA  LF  M   GV 
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D   +  VL +      +   + +     +   + + ++  +L++ Y KCG +E A  +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+V  ++MI  YA     +E ++ +L+M    + PD F     L++CA+L A 
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + G+     I +  F+++ F  N+L++MYAKCG++      F E+ ++ IV  +A I GL
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           A++G  K +  +FGQ  + G+ P+  T + +LC C HAGL+ +    F ++   + ++  
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D+ GRAG   +A  L+  MP + NA VWGALL   R+ K+ ++ +   + L 
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           A+EP  +  +V LSNIY+ +G WD  A+VR  M    +KK PG SWIE++  V+ F   D
Sbjct: 510 ALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADD 569

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           +SH  S +IYAKL+++ + +   G+VP  E    DVE+ EKE++L HHSEKLAVAFGLI+
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLIS 629

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T  G  IRV KNLR+C DCH   + ISKI  REI+VRD NRFH F NGSCSC  YW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 223/472 (47%), Gaps = 48/472 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT   +  LG+ +H +VV  GF+ D     SL+ +Y+  G   D+ ++F+ IPERS
Sbjct: 117 VLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERS 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +LFS Y       EA+  FK+MV  G+RP+ + +  +++AC   GD   G  I  
Sbjct: 177 VVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVK 236

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +  ++    + F    LV++YAK G +E A +VF  +   DIV+W+ +I G   +     
Sbjct: 237 HMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKE 296

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            ++ F QM    + P+ F+    L +CA +   +LG      + + E  ++  +   L+D
Sbjct: 297 GIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG+M     +F  M EK+++  N  ISG  +NG    + ++F    + G+  D +T
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L           C  VHA                        G ++D ++ F   S
Sbjct: 417 FLGLL-----------CGCVHA------------------------GLIQDGLRFFNAIS 441

Query: 361 AVDLVACT-----SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            V  +  T      M+  + + G+ ++A +L  +M  R   P++ V  +LL+ C  +   
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR---PNAIVWGALLSGCRLVKDT 498

Query: 416 EQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +  + V   +I    +    AGN   L N+Y+  G  D+A      +  +G+
Sbjct: 499 QLAETVLKELIA---LEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGM 547



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 229/469 (48%), Gaps = 18/469 (3%)

Query: 16  QVHGIVVFTGFDSDEFVANSLV--VMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           QVH  ++      D F+ N L+   ++ +  ++  S  LF      ++  +N+L + +V+
Sbjct: 31  QVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHY--SFLLFSHTQFPNIFLYNTLINGFVN 88

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                E +  F  +   G+  + F+   ++ AC  + +  LG  +H   +K G++ D+ +
Sbjct: 89  NHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAA 148

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             +L+ +Y+  G L DA  VF++I    +V+W A+ +G      +  A+ LF++M    +
Sbjct: 149 MTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGV 208

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            P+ +     L AC  +   + G  +   + +ME++ +  V   LV++YAKCG M++AR 
Sbjct: 209 RPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
           +F  M EK+++ W+ +I G+  N    E    F  M +E +  DQ ++   L S AS  A
Sbjct: 269 VFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGA 328

Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
           + + +   +L  +  F ++ ++ N+LID Y KCG +    ++FKE    D+V   + I+ 
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
            A+ G  + +  ++ + +   I+PD      LL  C +    + G +       F  +S 
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF------FNAISC 442

Query: 434 TFAGNS-------LVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGG 474
            +A          +V+++ + G +DDA R   ++P R   + W A++ G
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/645 (37%), Positives = 379/645 (58%), Gaps = 7/645 (1%)

Query: 14  GLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYV 72
           G ++H   +  G   +D F  N+LV  YA  G   D+RR+FD +P R +VSWNSL S  +
Sbjct: 130 GAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALL 189

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
               LE+A      M+ SGI  N  SL S++ AC    D   G  +HG  +K G DS + 
Sbjct: 190 TNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVN 249

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE--HNDWALKLFQQMKS 190
             NALVDMY K G+LE ++ VF  ++  + VSWN+ + GC  H   H D  L++F+ M  
Sbjct: 250 LGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSAL-GCFAHAGFHED-VLEMFRVMSE 307

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
            E+ P   T +S L A   +    LG+++H   I+  ++SD  +   L+DMYAK G +++
Sbjct: 308 HEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEK 367

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A  IF  +  +N+++WN +I+   QNG + EA SL   M + G   +  TL  +L + + 
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR 427

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
             ++ + KQ+HA S+  +  SD ++ N+LID Y KCG +  A  IF  S   D V+  ++
Sbjct: 428 VASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDD-VSYNTL 486

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  Y+Q     E+L L+ +M+   I  D+      L+ACANLSA++QGK++H  +++   
Sbjct: 487 IVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLL 546

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            +  F  NSL+++Y K G +  A + F+ I  + + SW+ MI G   HG+   A ++F  
Sbjct: 547 NTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDL 606

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M +DGV  +H++ ++VL AC+H GLV   K +F  M  +  I+P Q HYACM+D+LGRAG
Sbjct: 607 MKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAG 665

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           +  E++E++  MPF AN+ VWGALLG+ RI+ ++E+ + AAE LF ++PE S  + LL N
Sbjct: 666 QLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRN 725

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           +Y+ +GMW+   +++  MK  K++K P  SW++  +K+  F VGD
Sbjct: 726 MYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 259/480 (53%), Gaps = 2/480 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC +++D   GL VHG+V+ +G DS   + N+LV MY K G+   S R+F+ + E++
Sbjct: 219 VVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKN 278

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSWNS   C+ H  F E+ +  F+ M    + P   +LSS++ A    G   LG+++HG
Sbjct: 279 EVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHG 338

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           YSI+   +SD+F AN+L+DMYAK G LE A A+F++IE  ++VSWNA+IA    +     
Sbjct: 339 YSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETE 398

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  L  +M+ +   PN FT  + L AC+ +   ++G+Q+H   I   + SD  V   L+D
Sbjct: 399 AFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALID 458

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +YAKCG +  A+ IF    EK+ +++N +I G+ Q+    E+  LF  M   G+ +D  +
Sbjct: 459 VYAKCGQLSVAQDIFD-RSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVS 517

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
               L + A+  A    K++H + V+    +  ++ NSL+D Y K G +  A KIF   +
Sbjct: 518 FMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRIT 577

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D+ +  +MI  Y   G  + A +L+  M+D  ++ D     ++L+AC++    ++GK+
Sbjct: 578 RKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKK 637

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHG 479
               +I             +V++  + G + ++    + +P       W A++G    HG
Sbjct: 638 YFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHG 697



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 276/564 (48%), Gaps = 13/564 (2%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPER--SVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
           +A +L++ YA   +   +R +    P R  S   WNSL           EA+  +  MV 
Sbjct: 40  LAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMVR 99

Query: 90  SGIRPNEFSLSSMINACAGSGDSLL-----GRKIHGYSIKLG-YDSDMFSANALVDMYAK 143
           SG+RP++ +    ++A A +  +       G ++H  +++ G   +D+F+ N LV  YA 
Sbjct: 100 SGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAA 159

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
            G   DA  VF ++   DIVSWN++++  + +   + A +    M  S I  N+ +  S 
Sbjct: 160 RGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSV 219

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           + AC     +  G  +H  ++K  + S   +G  LVDMY K G ++ +  +F+ M EKN 
Sbjct: 220 VPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNE 279

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
           ++WN  +      G   +   +F  M    V     TLS++L ++       + K+VH  
Sbjct: 280 VSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGY 339

Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           S++ A ESD +I NSL+D Y K G +E A  IF+     ++V+  +MI   AQ G   EA
Sbjct: 340 SIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEA 399

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
             L +EMQ     P+SF   +LL AC+ +++ + GKQ+H   I    MSD F  N+L+++
Sbjct: 400 FSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDV 459

Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
           YAKCG +  A   F    ++  VS++ +I G +Q     E+L +F QM   G+  + ++ 
Sbjct: 460 YAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSF 518

Query: 504 VSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
           +  L AC +     + K  H   + +     P   +   ++D+  + G    A ++ + +
Sbjct: 519 MGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLAN--SLLDLYTKGGMLATASKIFNRI 576

Query: 563 PFQANASVWGALLGAARIYKNVEV 586
             +  AS W  ++    ++  ++V
Sbjct: 577 TRKDVAS-WNTMILGYGMHGQIDV 599


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/635 (37%), Positives = 371/635 (58%), Gaps = 34/635 (5%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
           L+ +YA  G    A  +F +I   ++V +N +I   V +     AL +++ M +    P+
Sbjct: 60  LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
           M+TY   LKA +  +   +G Q+H +++K+ +  +  VG GL+ MY KC S+ EA+ +  
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +P +++++WN ++S + QNG   +A  L   M    +  +  T++++L +V +  +  V
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNV 239

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
                 L VK  F                       +K+ K+S    +++   MI  Y  
Sbjct: 240 ------LYVKEMF-----------------------LKLTKKS----VISWNVMIAMYVN 266

Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
             + +EA+ LY +M+   + PD     S+L A  +LSA   G++VH    +   + +   
Sbjct: 267 NSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLL 326

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
            N+L++MYAKCG + DA   F+++  R +VSW+++I    + G+G++A+ +F +M   G+
Sbjct: 327 ENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGL 386

Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
            P+ I  VSVL AC+HAGL+ + +++F  M  + GI P  EH+AC++D+LGRAGK  EA 
Sbjct: 387 NPDSIAFVSVLAACSHAGLLDDGRYYFNLM-AECGITPKLEHFACVVDLLGRAGKIDEAY 445

Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
             +  MP + +  VWG LL A R+Y N+ +G  AA+ L  + PE S  +VLLSNIYA AG
Sbjct: 446 GFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAG 505

Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
            W +VA +R  M+   +KK PG+S +E+ D V+TF  GD SH +SK+IY +LD +   + 
Sbjct: 506 RWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMK 565

Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHT 736
           + GY+P  ++ LHDVEE +KE  L  HSEKLAVAF +I T PG  IRV KNLR+C DCH 
Sbjct: 566 ELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHV 625

Query: 737 SFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           + + ISKI  REII+RD +RFHHF+ G CSCG YW
Sbjct: 626 AAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 216/430 (50%), Gaps = 33/430 (7%)

Query: 32  VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
           V   L+ +YA CG    +R +FD I +++VV +N +   YV+    ++A+  +K M   G
Sbjct: 56  VGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG 115

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
             P+ ++   ++ A + S    +G +IHG  +K+G D +++  N L+ MY K  +L++A 
Sbjct: 116 FVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQ 175

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            V  +I   D+VSWN++++    +   + AL+L ++M++  + PN  T  S L A     
Sbjct: 176 QVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN-- 233

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
                             SD ++ V               + +F  + +K++I+WN++I+
Sbjct: 234 ----------------TTSDNVLYV---------------KEMFLKLTKKSVISWNVMIA 262

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
            ++ N    EA  L+  M   GV  D  ++ +VL +     A+ + ++VH  + +     
Sbjct: 263 MYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLP 322

Query: 332 DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
           +  + N+LID Y KCG + DA  +F +    D+V+ TS+I+AY + G G +A+ ++ EM+
Sbjct: 323 NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382

Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
           +  +NPDS    S+L AC++    + G+     + + G          +V++  + G ID
Sbjct: 383 NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKID 442

Query: 452 DADRAFSEIP 461
           +A     ++P
Sbjct: 443 EAYGFIRQMP 452



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 177/362 (48%), Gaps = 36/362 (9%)

Query: 217 RQLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           ++LH  ++  + ++ +P VG+ L+ +YA CG    AR IF  + +KN++ +N++I  ++ 
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N    +A  ++  MY +G   D  T   VLK+ +   ++ V  Q+H   +K   + + Y+
Sbjct: 98  NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            N LI  YGKC  +++A ++  E    D+V+  SM++ YAQ G   +AL+L  EM+   +
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNL 217

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            P+    +SLL A  N +                  SD         +Y K         
Sbjct: 218 KPNDCTMASLLPAVTNTT------------------SDNV-------LYVK--------E 244

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F ++  + ++SW+ MI     +   KEA+ ++ QM  +GV P+ +++VSVL A      
Sbjct: 245 MFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSA 304

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           ++  +   +  E+K  + P       +ID+  + G  ++A  + + M F+   S W +++
Sbjct: 305 LSLGRRVHKFAERK-KLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVS-WTSII 362

Query: 576 GA 577
            A
Sbjct: 363 SA 364



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 69/341 (20%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVAN-------------------------- 34
           VLKA +    L++GLQ+HG V+  G D + +V N                          
Sbjct: 126 VLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRD 185

Query: 35  -----SLVVMYAKCGNFIDS-------------------------------------RRL 52
                S+V +YA+ G F D+                                     + +
Sbjct: 186 VVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEM 245

Query: 53  FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
           F  + ++SV+SWN + + YV+    +EAV  + +M  +G+ P+  S+ S++ A       
Sbjct: 246 FLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSAL 305

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            LGR++H ++ +     ++   NAL+DMYAK G L DA AVF  ++  D+VSW ++I+  
Sbjct: 306 SLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAY 365

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
                   A+ +F +M++S +NP+   + S L AC+   L + GR     + +  I    
Sbjct: 366 GKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKL 425

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
                +VD+  + G +DEA      MP E +   W  ++S 
Sbjct: 426 EHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 1/178 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A      L LG +VH          +  + N+L+ MYAKCG   D+R +F+ +  R 
Sbjct: 295 VLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRD 354

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S Y  C    +AV  F EM  SG+ P+  +  S++ AC+ +G    GR    
Sbjct: 355 VVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFN 414

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEH 177
              + G    +     +VD+  + G +++A    + +   PD   W  +++ C ++ +
Sbjct: 415 LMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSN 472


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/556 (39%), Positives = 342/556 (61%), Gaps = 1/556 (0%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           R LHC +IK    +   +G  LV  Y + G   +A  +F  +P+K+L++WN +ISG  + 
Sbjct: 58  RALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRR 117

Query: 277 GG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
               +    LF   +  G+  ++ T+  V+ + A    + V K +H ++VK+    +  +
Sbjct: 118 ADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKV 177

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
           VNSLI+ YGKCG +E A  +F+  S   LV+  SM+  +   GL E+ +  ++ M+   I
Sbjct: 178 VNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGI 237

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           N D     SLL AC NL   +  + VH +I+  G   +     +L+++YAK G++ D+ +
Sbjct: 238 NSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCK 297

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGL 515
            F  + +   V+W+AM+   A HGRG+EA++ F  M+ +GV+P+H+T   +L AC+H+GL
Sbjct: 298 VFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGL 357

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
           V E K++F+ M + +G++   EHY+CM+D+LGR+G   +A +L+ +MP + N+ VWGAL+
Sbjct: 358 VEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI 417

Query: 576 GAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKK 635
           GA R+  N+E+G+  AE LF+++P  S  ++ LSN+Y++AG W + +KVR  MK+  L +
Sbjct: 418 GACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIR 477

Query: 636 EPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESE 695
            PG S+IE  +K++ F +GD+SH  +++IY KL+E+     + G+    E  LHDV+E  
Sbjct: 478 NPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEV 537

Query: 696 KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVN 755
           KE L+  HSEKLA+AFGL+ T  G  + + KN+RIC DCH   + IS I  R II+RD  
Sbjct: 538 KEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTK 597

Query: 756 RFHHFRNGSCSCGGYW 771
           RFHHF NG CSCG YW
Sbjct: 598 RFHHFTNGLCSCGDYW 613



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 209/445 (46%), Gaps = 51/445 (11%)

Query: 31  FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCF---FKEM 87
           F+ + LV  Y + G   D+  LFD +P++ +VSWNSL S +     L   +C    F+  
Sbjct: 74  FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADL--GICLGLLFRMR 131

Query: 88  VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNL 147
              G++PNE ++  +++ACAG G+  +G+ IHG ++K G   ++   N+L+++Y K G L
Sbjct: 132 FEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCL 191

Query: 148 EDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK---LFQQMKSSEINPNMFTYTSAL 204
           E A  +F+ +    +VSWN+++A   +H H   A K    F  M+ + IN +  T  S L
Sbjct: 192 EAACCLFEGMSVQSLVSWNSMVA---VHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLL 248

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            AC  + +++L   +H  ++   +  +  +   L+D+YAK G++ ++  +F  M   + +
Sbjct: 249 LACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAV 308

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           AW  ++S +  +G   EA   F  M REGV  D  T + +L + +    +   K    + 
Sbjct: 309 AWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIM 368

Query: 325 VK---TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
            +        + Y  + ++D  G+ GH+ DA K+ K                        
Sbjct: 369 YEFYGVELRVEHY--SCMVDLLGRSGHLNDAYKLIK------------------------ 402

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
                        + P+S V  +L+ AC      E GK+V   +      SD+    +L 
Sbjct: 403 ----------SMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLD-PSDSRNYITLS 451

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIV 466
           NMY+  G   DA +  + + +R ++
Sbjct: 452 NMYSAAGQWRDASKVRALMKERVLI 476



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 207/420 (49%), Gaps = 13/420 (3%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           +S++I A +        R +H   IK    +  F  + LV  Y ++G  +DA+ +F ++ 
Sbjct: 41  VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP 100

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGR 217
             D+VSWN++I+G          L L  +M+    + PN  T    + ACAG+   ++G+
Sbjct: 101 DKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGK 160

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
            +H   +K  +  +  V   L+++Y KCG ++ A  +F  M  ++L++WN +++ H+  G
Sbjct: 161 CIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMG 220

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              +    F  M R G+  DQ T+ ++L +  +     + + VH   +    + +  I  
Sbjct: 221 LAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y K G + D+ K+F      D VA T+M+++YA  G G EA++ +  M    + P
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVP 340

Query: 398 DSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           D    + LL+AC++    E+GK     + +F G        + +V++  + G ++DA + 
Sbjct: 341 DHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKL 400

Query: 457 FSEI---PDRGIVSWSAMIGGLAQHGR---GKE-ALQMFGQMLEDGVLPNHITLVSVLCA 509
              +   P+ G+  W A+IG     G    GKE A ++F   L+     N+ITL ++  A
Sbjct: 401 IKSMPMEPNSGV--WGALIGACRVRGNIELGKEVAERLFS--LDPSDSRNYITLSNMYSA 456



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 153/285 (53%), Gaps = 7/285 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ AC    +L +G  +HGI V +G   +  V NSL+ +Y KCG    +  LF+ +  +S
Sbjct: 146 VVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQS 205

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWNS+ + +VH    E+ + +F  M  +GI  ++ ++ S++ AC   G   L   +HG
Sbjct: 206 LVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHG 265

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +  G D ++  A AL+D+YAK+G L D+  VF  + +PD V+W A+++   +H     
Sbjct: 266 YILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGRE 325

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR---QLHCSLIKMEIKSDPIVGVG 237
           A++ F+ M    + P+  T+T  L AC+   L E G+   ++      +E++ +      
Sbjct: 326 AIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHY--SC 383

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDME 281
           +VD+  + G +++A  +   MP E N   W  +I G  +  G++E
Sbjct: 384 MVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI-GACRVRGNIE 427


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/741 (32%), Positives = 411/741 (55%), Gaps = 10/741 (1%)

Query: 35  SLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP 94
           SLV+ +A  G   D+     + P+  +   N +   +      E A+  ++ M+ +G RP
Sbjct: 48  SLVLSHAAAGRMHDALAAVRSSPDAFL--HNVVIRGFADAGLPEAALAAYRAMLAAGARP 105

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY-DSDMFSANALVDMYAKVGNLEDAVAV 153
           + F+   ++  CA  G    GR  H  +I+LG   S++++ N+L+  YAK+G + DA  V
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERV 165

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMEL 212
           F  +   DIV+WN+++ G V +     AL  F++M    ++  +     +AL AC     
Sbjct: 166 FDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSA 225

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
              GR++H  +I+  ++ D  VG  L+DMY KCG++  A  +F  MP + ++ WN +I G
Sbjct: 226 LMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGG 285

Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
           +  NG   EA   F  M  EG   +  T   +L + A  ++    + VH    ++ F   
Sbjct: 286 YALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPH 345

Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
             +  +L++ Y K G V+ +  IF + +   LV+  +MI AY    +  EA+ L+LE+ +
Sbjct: 346 VVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLN 405

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           + + PD F  S+++ A   L    Q +Q+H +I++  +  +T   N++++MYA+CG +  
Sbjct: 406 QPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVS 465

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
           + + F ++  + ++SW+ +I G A HG+GK AL+MF +M  +G+ PN  T VSVL AC+ 
Sbjct: 466 SRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSV 525

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           +G+  E    F  M++ +GI P  EHY CM D+LGRAG  +E ++ ++++P      +WG
Sbjct: 526 SGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWG 585

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           +LL A+R   ++++ ++AAE +F +E + +  +V+LS++YA AG W++V ++R  M +  
Sbjct: 586 SLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKG 645

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV- 691
           L++    S +E+     +F  GD +H +SK I+    EVSD+L++         +L D  
Sbjct: 646 LRRTDARSIVELHGSSCSFVNGDMTHPQSKTIH----EVSDVLSRKIGETDYPRNLSDPI 701

Query: 692 -EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
              S +  +   HS +LAV FGLI++   A I VKKN+RIC  CH + + ISK   R I+
Sbjct: 702 SLTSRRTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIV 761

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           V D N +H F +GSC CG YW
Sbjct: 762 VGDTNIYHEFLDGSCCCGDYW 782



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 226/464 (48%), Gaps = 3/464 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGF-DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           V+K C     L  G   H   +  G   S+ +  NSL+  YAK G   D+ R+FD +P R
Sbjct: 113 VVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR 172

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +V+WNS+   YV       A+  F+EM     ++ +   + + + AC      + GR++
Sbjct: 173 DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREV 232

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H Y I+ G + D+    +L+DMY K G +  A  +F  +    +V+WN +I G  L+   
Sbjct: 233 HAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCP 292

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + A   F QMK+      + T  + L ACA  E    GR +H  + + +     ++   L
Sbjct: 293 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETAL 352

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           ++MY+K G +  +  IF  M  K L++WN +I+ ++      EA +LF  +  + +  D 
Sbjct: 353 LEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDY 412

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
            T+S V+ +      +  C+Q+H+  V+  +  +  + N+++  Y +CG V  + KIF +
Sbjct: 413 FTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDK 472

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            +  D+++  ++I  YA  G G+ AL+++ EM+   + P+     S+L AC+     ++G
Sbjct: 473 MAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEG 532

Query: 419 -KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
             Q ++    +G +        + ++  + G + +  +    IP
Sbjct: 533 WIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIP 576


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/574 (38%), Positives = 349/574 (60%), Gaps = 2/574 (0%)

Query: 199 TYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLM 258
           TY + + AC G++     ++L   ++    + D  +   ++ M+ KCG M +A  +F  M
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 259 PEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
           P +N ++W  +ISG++ +G  +EA  LF  M  E       T +T++++ A  + I   +
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
           Q+H+ ++K     D ++  +LID Y KCG +EDA  +F E     +V   S+I  YA  G
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             EEAL LY EM+D  +  D F  S ++  C+ L++  + KQVH  +++ GF  D  A  
Sbjct: 314 YSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANT 373

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +LV+ Y+K G +DDA   F  +  R I+SW+A+I G   HG G+EA+ MF +ML +G++P
Sbjct: 374 ALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMP 433

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           NH+T ++VL AC+ +GL       F+SM +   ++P   H+ACMI++LGR G   EA  L
Sbjct: 434 NHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYAL 493

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           +   PFQ  A++W ALL A R++ N+E+G+ AAE L+ +EPEK S +++L NIY S+G  
Sbjct: 494 IRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKL 553

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
              A V + +K   L+  P  SWIEV ++ + F  GD+ H + +++  K+DE+   ++K 
Sbjct: 554 KEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKL 613

Query: 679 GYVPMVET-DLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
           GYVP  +   L DV+E+E E++  +HSEKLA+A+GL+ T     +++ ++ RIC DCH+ 
Sbjct: 614 GYVPEEQNFMLPDVDENE-EKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSV 672

Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            + I+ I  REI++RD +RFHHFR+GSCSCG YW
Sbjct: 673 IKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 227/466 (48%), Gaps = 36/466 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++ AC   K +    ++   +V  GF+ D+++ N +++M+ KCG  ID+ RLFD +P R+
Sbjct: 138 LINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARN 197

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            VSW ++ S YV      EA   F  M          + ++MI A AG      GR++H 
Sbjct: 198 AVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHS 257

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK G   D+F + AL+DMY+K G+LEDA  VF ++    IV WN++IAG  LH +++ 
Sbjct: 258 CAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEE 317

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL L+ +M+ S +  + FT++  ++ C+ +      +Q+H SL++     D +    LVD
Sbjct: 318 ALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVD 377

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            Y+K G +D+AR +F  M  +N+I+WN +I+G+  +G   EA  +F  M REG+  +  T
Sbjct: 378 FYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVT 437

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              VL                A S+   FE    I  S+              +  K   
Sbjct: 438 FLAVLS---------------ACSISGLFERGWEIFQSM-------------TRDHKVKP 469

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                AC  MI    + GL +EA   Y  ++     P + + ++LL AC      E GK 
Sbjct: 470 RAMHFAC--MIELLGREGLLDEA---YALIRKAPFQPTANMWAALLRACRVHGNLELGKF 524

Query: 421 VHVHIIKFGFMSDTFAGN-SLVNMYAKCGSIDDADRAFSEIPDRGI 465
               +  +G   +  +    L+N+Y   G + +A   F  +  +G+
Sbjct: 525 AAEKL--YGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGL 568



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 230/442 (52%), Gaps = 19/442 (4%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI 157
           +  ++INAC G       +++  Y +  G++ D +  N ++ M+ K G + DA  +F ++
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 158 EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGR 217
              + VSW  +I+G V   +   A +LF  M+    +    T+ + ++A AG+E+   GR
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253

Query: 218 QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
           QLH   IK  +  D  V   L+DMY+KCGS+++A  +F  MP+K ++ WN +I+G+  +G
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313

Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN 337
              EA  L+  M   GV  D  T S +++  +   ++   KQVHA  V+  F  D     
Sbjct: 314 YSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANT 373

Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
           +L+D Y K G V+DA  +F   S  ++++  ++I  Y   G GEEA+ ++ +M    + P
Sbjct: 374 ALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMP 433

Query: 398 DSFVCSSLLNACANLSAYEQGKQV-----HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           +     ++L+AC+    +E+G ++       H +K   M   FA   ++ +  + G +D+
Sbjct: 434 NHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMH--FA--CMIELLGREGLLDE 489

Query: 453 ADRAFSEIPDRGIVS-WSAMIGGLAQHGR---GK-EALQMFGQMLEDGVLPNHITLVSVL 507
           A     + P +   + W+A++     HG    GK  A +++G  +E   L N+I L+++ 
Sbjct: 490 AYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG--MEPEKLSNYIVLLNIY 547

Query: 508 CACNHAGLVAEAKHHFESMEKK 529
              N +G + EA   F+++++K
Sbjct: 548 ---NSSGKLKEAADVFQTLKRK 566


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/655 (36%), Positives = 362/655 (55%), Gaps = 75/655 (11%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           +IH   I  G+     S   L+++Y+     + A +VF    +P  + WN++I      +
Sbjct: 70  QIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 128

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + AL+++                                  +C + K  ++ D  +G 
Sbjct: 129 QYNEALEMY----------------------------------YCMVEKGGLERDVFIGA 154

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
           GLVDMY+K G +  AR +F  MP+++++AWN +I+G L    D       P++ R    F
Sbjct: 155 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG-LSQSED-------PYVARRV--F 204

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           DQ                               + DD    +++  Y   G   + +++F
Sbjct: 205 DQMV-----------------------------DQDDVSWGTMMAGYAHNGCFVEVLELF 235

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            +   +  V    +I AY Q G  +EA+  + +M+    +P+S    S+L A A L+A+ 
Sbjct: 236 -DKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 294

Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
           +G   H  II+ GF+S+T  GNSL++MYAKCG +D +++ F+E+  +  VSW+AM+ G A
Sbjct: 295 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 354

Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
            HG G  A+ +F  M E  V  + ++ VSVL AC HAGLV E +  F SM  K+ I+P  
Sbjct: 355 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDL 414

Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           EHYACM+D+LGRAG F E +  +  MP + +A VWGALLG+ R++ NV++G+ A + L  
Sbjct: 415 EHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVK 474

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
           +EP   +  V+LS+IYA +G W +  K R  M D  LKK PG SW+E+K+KV+ F VGD+
Sbjct: 475 LEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDK 534

Query: 657 SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT 716
           SH + + ++   + + + + K GYVP     L +VEE +KE  LY HSE+LA+ F L+ T
Sbjct: 535 SHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNT 594

Query: 717 PPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PPG+TI++ KNLR+C DCHT+ +FISKI +R IIVRD  RFHHF +G CSC  YW
Sbjct: 595 PPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 85/486 (17%)

Query: 3   KACTSKKDLFLGLQVHGIVVFTGFDSDEFVAN--SLVVMYAKCGNFIDSRRLFDAIPERS 60
           +  +S K L   LQ+H  ++ +GF     + +  +L  ++ KC     +R +FD+ P  S
Sbjct: 57  RLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARSVFDSTPNPS 113

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WNS+   Y       EA+  +  MV  G                             
Sbjct: 114 RILWNSMIRAYTRSKQYNEALEMYYCMVEKG----------------------------- 144

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G + D+F    LVDMY+K+G+L+ A  VF  +   D+V+WNA+IAG    E    
Sbjct: 145 -----GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYV 199

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A ++F QM                                       +  D +    ++ 
Sbjct: 200 ARRVFDQM---------------------------------------VDQDDVSWGTMMA 220

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            YA  G   E   +F  M   N + WN++I+ ++QNG   EA S F  M  E    +  T
Sbjct: 221 GYAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 279

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
             +VL + A   A       HA  ++  F S+  + NSLID Y KCG ++ + K+F E  
Sbjct: 280 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 339

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V+  +M++ YA  G G+ A+ L+  MQ+ ++  DS    S+L+AC +    E+G++
Sbjct: 340 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 399

Query: 421 V-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA---DRAFSEIPDRGIVSWSAMIGGLA 476
           + H    K+    D      +V++  + G  D+     +     PD G+  W A++G   
Sbjct: 400 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGV--WGALLGSCR 457

Query: 477 QHGRGK 482
            H   K
Sbjct: 458 MHSNVK 463



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 64/334 (19%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTG-FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +++A T  K     L+++  +V  G  + D F+   LV MY+K G+   +R +FD +P+R
Sbjct: 120 MIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR 179

Query: 60  SVVSWN-------------------------------SLFSCYVHCDFLEEAVCFFKEMV 88
            VV+WN                               ++ + Y H     E +  F +M 
Sbjct: 180 DVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 239

Query: 89  LSGI------------------------------RPNEFSLSSMINACAGSGDSLLGRKI 118
           L  +                               PN  +  S++ A A       G   
Sbjct: 240 LGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 299

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   I++G+ S+    N+L+DMYAK G L+ +  +F +++H D VSWNA+++G  +H H 
Sbjct: 300 HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 359

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL-HCSLIKMEIKSDPIVGVG 237
           D A+ LF  M+ S++  +  ++ S L AC    L E GR++ H    K  IK D      
Sbjct: 360 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 419

Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           +VD+  + G  DE      +MP E +   W  ++
Sbjct: 420 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 3/199 (1%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G+  H  ++  GF S+  V NSL+ MYAKCG    S +LF+ +  +  VSWN++ S Y  
Sbjct: 296 GMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAV 355

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-HGYSIKLGYDSDMF 132
               + A+  F  M  S ++ +  S  S+++AC  +G    GRKI H  S K     D+ 
Sbjct: 356 HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLE 415

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHNDWA-LKLFQQMKS 190
               +VD+  + G  ++ +   K +   PD   W A++  C +H +     + L   +K 
Sbjct: 416 HYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKL 475

Query: 191 SEINPNMFTYTSALKACAG 209
              NP  F   S++ A +G
Sbjct: 476 EPRNPAHFVVLSSIYAQSG 494



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 11/174 (6%)

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           LL++C +L+      Q+H  II  GF     +   L+N+Y+     D A   F   P+  
Sbjct: 58  LLSSCKHLNPL---LQIHAQIIVSGF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPS 113

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC-ACNHAGLVAEAKHHF 523
            + W++MI    +  +  EAL+M+  M+E G L   + + + L    +  G +  A+  F
Sbjct: 114 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVF 173

Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
           + M K+  +      +  MI  L ++     A  + D M  Q + S WG ++  
Sbjct: 174 DKMPKRDVVA-----WNAMIAGLSQSEDPYVARRVFDQMVDQDDVS-WGTMMAG 221


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/559 (39%), Positives = 338/559 (60%), Gaps = 4/559 (0%)

Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
           G QLH  +IK+ +++ P++   L++ Y+K      +  IFH  P K+   W+ VIS   Q
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
           N   + + + F  M R+GV  D     +  KS     ++ V K +H  ++KTA+  D ++
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
            +S+ID Y KCG +  A  +F E    ++V+ + +I  Y Q G  +E+L+L+      E 
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218

Query: 396 NP--DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
           N   + F  SS+L  C   +  + G+ +H    K  F S  F  +SL+++Y+KCG +++A
Sbjct: 219 NEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEA 278

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNH 512
              F E+  R +  W+AM+   AQH    +  ++F +M    G+  N IT + VL AC+H
Sbjct: 279 YDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSH 338

Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
           AGLV + K++FE M K +GI+P  +HY+ M+D+LGRAGK  +A++L++ MP +   SVWG
Sbjct: 339 AGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWG 397

Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
           ALL   R++ N ++  + A+ +  +    S  HV+LSN YA+AG W+  AK R+ M+D  
Sbjct: 398 ALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRG 457

Query: 633 LKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE 692
           +KKE G+SW+E  ++++TF  GDRSHA+S EIY KLDE+ + ++KAGYV      L +V+
Sbjct: 458 IKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVD 517

Query: 693 ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVR 752
             EK + + +HSE+LA+AFG I  P G  IRV KNLR+C DCHT+ +FISK   R IIVR
Sbjct: 518 GEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVR 577

Query: 753 DVNRFHHFRNGSCSCGGYW 771
           D NRFH F +G C+CG YW
Sbjct: 578 DNNRFHRFEDGKCTCGDYW 596



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 222/433 (51%), Gaps = 12/433 (2%)

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           G ++H + IKLG  +    ++ L++ Y+K      ++ +F D  H    +W++VI+    
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           ++    +L  F+ M    + P+   + SA K+C  +    + + LHC  +K     D  V
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP--WMYRE 292
           G  ++DMYAKCG +  A  +F  MP +N+++W+ +I G++Q G D E+  LF    +  E
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
             G +  TLS+VL+       + + + +H LS KT+F+S  ++ +SLI  Y KCG VE+A
Sbjct: 219 NEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEA 278

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD---REINPDSFVCSSLLNAC 409
             +F+E +  +L    +M+ A AQ    ++  +L+ +M+     + N  +F+C  +L AC
Sbjct: 279 YDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLC--VLYAC 336

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-W 468
           ++    E+GK     +  +G    T   +++V++  + G ++DA +   E+P     S W
Sbjct: 337 SHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVW 396

Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPN--HITLVSVLCACNHAGLVAEAKHHF--E 524
            A++ G   HG  K A  +  ++ E G + +  H+ L +   A       A+A+      
Sbjct: 397 GALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDR 456

Query: 525 SMEKKFGIQPMQE 537
            ++K+ G+  ++E
Sbjct: 457 GIKKETGLSWVEE 469



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 207/461 (44%), Gaps = 49/461 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            L + T  + L  GLQ+H  ++  G  +   +++ L+  Y+K      S ++F   P +S
Sbjct: 26  TLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKS 85

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             +W+S+ S +   D    ++ +F+ M+  G+ P++    S   +C       + + +H 
Sbjct: 86  ATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHC 145

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +++K  Y  D+F  ++++DMYAK G++  A  VF ++ + ++VSW+ +I G V    +D 
Sbjct: 146 FALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDE 205

Query: 181 ALKLFQQMKSSEINP--NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           +L+LF++    E N   N FT +S L+ C G  L ++GR +H    K    S   V   L
Sbjct: 206 SLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSL 265

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFD 297
           + +Y+KCG ++EA  +F  +  +NL  WN ++    Q+    +   LF  M    G+  +
Sbjct: 266 ISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKAN 325

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T   VL + +    +   K    L      E      ++++D  G+ G + DAVK+ +
Sbjct: 326 FITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIE 385

Query: 358 E--------------------------SSAVDLVACTSMIT---------AYAQFGLGEE 382
           E                          S   D V+    ++         AYA  G  EE
Sbjct: 386 EMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEE 445

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHV 423
           A K    M+DR I  ++            LS  E+G ++H 
Sbjct: 446 AAKARKMMRDRGIKKET-----------GLSWVEEGNRIHT 475



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 10/343 (2%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L   L S+   +++    Q+HA  +K   ++   + + LI+ Y K      +++IF +S 
Sbjct: 23  LCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSP 82

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
                  +S+I+++AQ  L   +L  +  M  + + PD  +  S   +C  LS+    K 
Sbjct: 83  HKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKM 142

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   +K  +  D F G+S+++MYAKCG I  A   F E+P R +VSWS +I G  Q G 
Sbjct: 143 LHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGE 202

Query: 481 GKEALQMFGQML--EDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQE 537
             E+L++F + L  E+    N  TL SVL  C  + L+   +  H  S +  F       
Sbjct: 203 DDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVA 262

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
             + +I +  + G  +EA ++ + +  + N  +W A+L A   + + +      + + ++
Sbjct: 263 --SSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIACAQHAHTDKTFELFDKMKSV 319

Query: 598 EPEKSSTHVLLSNIYA--SAGMWDNVAKVRRFMKDNKLKKEPG 638
              K++    L  +YA   AG+ +        MKD  +  EPG
Sbjct: 320 GGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGI--EPG 360


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/662 (37%), Positives = 378/662 (57%), Gaps = 20/662 (3%)

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
           ++H +S+K    +  F ++ L+ +Y+  K+ +L  A ++F  I+   ++ WN +I   V 
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
           ++ +   + LF ++   E  P+ FT    +K CA + + + G+Q+H   +K+   SD  V
Sbjct: 91  NQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              LV+MY+KCG +D AR +F  M +K+++ WN +I G+ + G    A  LF  M  E  
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM-PERD 208

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES----DDYIVNSLIDAYGKCGHVE 350
            F  T L            +  C +V   S +  F+     +    N++I+ Y K G  +
Sbjct: 209 AFSWTVL---------VDGLSKCGKVE--SARKLFDQMPCRNLVSWNAMINGYMKSGDFD 257

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A+++F +    DLV    MI  Y   G   +A+K++  M      P      S+L+A +
Sbjct: 258 SALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 317

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
            L+   +G+ +H ++ K GF  D   G SL+ MYAKCG I+ A   F  I  + +  W+A
Sbjct: 318 GLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTA 377

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           +I GL  HG    AL +F +M + G+ PN I  + VL ACNHAGLV + + +F+ M  ++
Sbjct: 378 IIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEY 437

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
            I+P  EHY C++DIL RAG  +EA   ++ MP   N  +W +LLG +R +  +++G++A
Sbjct: 438 KIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYA 497

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
           A+ +  + PE    ++LLSN+YA++GMW+ V+ VR  M     +K+PG S +E K  ++ 
Sbjct: 498 AQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHE 557

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVE-ESEKEQLLYHHSEKLAV 709
           F VGD SH ++KEIYAK+ E+ + L   G+VP     L  +E E EKE  L +HSE+LA+
Sbjct: 558 FIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAI 617

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AFGLI   PG  IR+ KNLR+C DCH+  + +SKI SREIIVRD  RFHHF+NGSCSC  
Sbjct: 618 AFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMD 677

Query: 770 YW 771
           YW
Sbjct: 678 YW 679



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 241/473 (50%), Gaps = 21/473 (4%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q+H   + T   +  FV++ L+ +Y+  K  +   +R +FD I  RS++ WN++  CYV 
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
             F  + +  F E+V   + P+ F+L  +I  CA  G    G++IHG ++K+G+ SD+F 
Sbjct: 91  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
             +LV+MY+K G ++ A  VF  +   D+V WN++I G       D AL+LF++M   + 
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERD- 208

Query: 194 NPNMFTYT---SALKACAGME-LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
               F++T     L  C  +E  ++L  Q+ C         + +    +++ Y K G  D
Sbjct: 209 ---AFSWTVLVDGLSKCGKVESARKLFDQMPC--------RNLVSWNAMINGYMKSGDFD 257

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  +F+ MP  +L+ WN++I+G+  NG  M+A  +F  M + G      TL +VL +V+
Sbjct: 258 SALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 317

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               +G  + +H+   K  FE D  +  SLI+ Y KCG +E A+ +F+      +   T+
Sbjct: 318 GLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTA 377

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
           +I      G+   AL L+LEM    + P++ +   +LNAC +    + G+Q    ++   
Sbjct: 378 IIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEY 437

Query: 430 FMSDTFAG-NSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR 480
            +  T      LV++  + G +++A      +P     V W +++GG   HG+
Sbjct: 438 KIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGK 490



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 243/550 (44%), Gaps = 64/550 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+K C     +  G Q+HG+ +  GF SD FV  SLV MY+KCG    +R++FD + ++ 
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV WNSL   Y  C  ++ A+  F+EM       + FS + +++  +  G     RK+  
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKL-- 231

Query: 121 YSIKLGYDS----DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
                 +D     ++ S NA+++ Y K G+ + A+ +F  +   D+V+WN +IAG  L+ 
Sbjct: 232 ------FDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNG 285

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A+K+F  M      P+  T  S L A +G+ +   GR +H  + K   + D I+G 
Sbjct: 286 QFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT 345

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            L++MYAKCG ++ A  +F  + +K +  W  +I G   +G    A +LF  M + G+  
Sbjct: 346 SLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKP 405

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG-------KCGHV 349
           +      VL +      +   +Q   + +      ++Y +   ++ YG       + GH+
Sbjct: 406 NAIIFIGVLNACNHAGLVDDGRQYFDMMM------NEYKIEPTLEHYGCLVDILCRAGHL 459

Query: 350 EDAVKIFKESS-AVDLVACTSMITA---YAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
           E+A    +    + + V   S++     + +  +GE A +  +     E+ P++  C  L
Sbjct: 460 EEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI-----EVAPETIGCYIL 514

Query: 406 L-NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG 464
           L N  A    +E+   V   + K GF  D             C S++             
Sbjct: 515 LSNMYAASGMWEKVSHVREMMYKRGFRKD-----------PGCSSVEHKG---------- 553

Query: 465 IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI--TLVSVLCACNHAGLVAEAKHH 522
             +    I G   H + KE      +M E      H+  T   +LC        AE ++H
Sbjct: 554 --TLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENH 611

Query: 523 FESMEKKFGI 532
            E +   FG+
Sbjct: 612 SERLAIAFGL 621



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 17/260 (6%)

Query: 312 QAIGVC-----KQVHALSVKTAFESDDYIVNSLIDAYG--KCGHVEDAVKIFKESSAVDL 364
           Q +G+C     +Q+HA S+KTA  +  ++ + L+  Y   K   +  A  IF       L
Sbjct: 19  QRMGLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSL 78

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           +   ++I  Y +     + + L+ E+   E  PD+F    ++  CA L   ++GKQ+H  
Sbjct: 79  IHWNTIIKCYVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGL 137

Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
            +K GF SD F   SLVNMY+KCG ID A + F  + D+ +V W+++I G A+ G    A
Sbjct: 138 ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIA 197

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           LQ+F +M E     +   LV  L  C   G V  A+  F+ M  +  +      +  MI+
Sbjct: 198 LQLFEEMPERDAF-SWTVLVDGLSKC---GKVESARKLFDQMPCRNLVS-----WNAMIN 248

Query: 545 ILGRAGKFQEAMELVDTMPF 564
              ++G F  A+EL   MP 
Sbjct: 249 GYMKSGDFDSALELFYQMPI 268


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/617 (37%), Positives = 352/617 (57%), Gaps = 32/617 (5%)

Query: 187 QMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
           Q+      P   TY + ++ C+     E G+++H  +         ++   L+ MYAKCG
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134

Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-----------VG 295
           S+ +AR +F  MP ++L +WN++++G+ + G   EA  LF  M  +            V 
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194

Query: 296 FDQTTLSTVLKSV---------------------ASFQAIGVCKQVHALSVKTAFESDDY 334
            DQ   + VL S+                     A+ + I   K++H   V+   +SD+ 
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           + +SL+D YGKCG +++A  IF +    D+V+ TSMI  Y +     E   L+ E+    
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314

Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
             P+ +  + +LNACA+L+  E GKQVH ++ + GF   +FA +SLV+MY KCG+I+ A 
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374

Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
                 P   +VSW+++IGG AQ+G+  EAL+ F  +L+ G  P+H+T V+VL AC HAG
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434

Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
           LV +    F S+ +K  +    +HY C++D+L R+G+F++   ++  MP + +  +W ++
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494

Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
           LG    Y N+++ + AA+ LF IEPE   T+V ++NIYA+AG W+   K+R+ M++  + 
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554

Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
           K PG SW E+K K + F   D SH    +I   L E+   + + GYVP     LHDVE+ 
Sbjct: 555 KRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDE 614

Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
           +KE+ L +HSEKLAVAF +++T  G  I+V KNLR CVDCH + +FIS I  R+I VRD 
Sbjct: 615 QKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDS 674

Query: 755 NRFHHFRNGSCSCGGYW 771
            RFH F NG CSCG YW
Sbjct: 675 TRFHCFENGQCSCGDYW 691



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 207/465 (44%), Gaps = 58/465 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +++ C+  + L  G +VH  +  +GF     + N L+ MYAKCG+ +D+R++FD +P R 
Sbjct: 91  LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-------------------------------- 88
           + SWN + + Y     LEEA   F EM                                 
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210

Query: 89  LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           +   RPN F++S  + A A       G++IHG+ ++ G DSD    ++L+DMY K G ++
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           +A  +F  I   D+VSW ++I              LF ++  S   PN +T+   L ACA
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +  +ELG+Q+H  + ++           LVDMY KCG+++ A+ +    P+ +L++W  
Sbjct: 331 DLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTS 390

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL----------KSVASFQAIGVCK 318
           +I G  QNG   EA   F  + + G   D  T   VL          K +  F +I    
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI---T 447

Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE----SSAVDLVACTSMITAY 374
           + H LS      SD Y    L+D   + G  E    +  E     S     +     + Y
Sbjct: 448 EKHRLS----HTSDHYTC--LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               L EEA +   +++    NP ++V  + + A A     E+GK
Sbjct: 502 GNIDLAEEAAQELFKIEPE--NPVTYVTMANIYAAAG-KWEEEGK 543



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 218/442 (49%), Gaps = 17/442 (3%)

Query: 77  LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
           LEE     + +  SG  P     + ++   A  G  +  RK+         + D+ S N 
Sbjct: 101 LEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP----NRDLCSWNV 156

Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINP 195
           +V+ YA+VG LE+A  +F ++   D  SW A++ G V  +  + AL L+  M+      P
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216

Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
           N+FT + A+ A A ++    G+++H  +++  + SD ++   L+DMY KCG +DEAR IF
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             + EK++++W  +I  + ++    E  SLF  +       ++ T + VL + A      
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336

Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
           + KQVH    +  F+   +  +SL+D Y KCG++E A  +       DLV+ TS+I   A
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCA 396

Query: 376 QFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII---KFGFMS 432
           Q G  +EALK +  +      PD     ++L+AC +    E+G +    I    +    S
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS 456

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQHGR---GKEALQ-M 487
           D +    LV++ A+ G  +      SE+P +     W++++GG + +G     +EA Q +
Sbjct: 457 DHYT--CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514

Query: 488 FGQMLEDGVLPNHITLVSVLCA 509
           F    E+ V   ++T+ ++  A
Sbjct: 515 FKIEPENPV--TYVTMANIYAA 534



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 68/114 (59%)

Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
           G++ L+  +++  R   P +    +L+  C+   A E+GK+VH HI   GF+      N 
Sbjct: 66  GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125

Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
           L+ MYAKCGS+ DA + F E+P+R + SW+ M+ G A+ G  +EA ++F +M E
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/613 (38%), Positives = 346/613 (56%), Gaps = 42/613 (6%)

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL----VDMYAKCGSMD 249
           NP +F+    L+ C+  +L  L + +H  +I+  I  D      L    VD  +    +D
Sbjct: 18  NPKLFS----LETCS--DLTHL-KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLID 70

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
            A  IF  +   NL  +N +I GH  +    +A   +    R+G+  D  T   ++KS  
Sbjct: 71  YASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCT 130

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG------------------------- 344
               I +  Q H   +K  FE D Y+ NSL+  Y                          
Sbjct: 131 KLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTS 190

Query: 345 ------KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
                 KCG VE A K+F +    +LV  ++MI+ YAQ    ++A++L+  +Q + +  +
Sbjct: 191 MIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRAN 250

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
             V  S++++CA+L A E G++ H +++K G   +   G +LV+MYA+CGSID A   F 
Sbjct: 251 ETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFE 310

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           ++P+R  +SW+A+I GLA HG  + +L+ F  M+E G+ P  IT  +VL AC+H GLV  
Sbjct: 311 DLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVER 370

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
               FESM++   ++P  EHY CM+D+LGRAGK +EA   V  MP + NA VWGALLGA 
Sbjct: 371 GFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGAC 430

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+KN E+G+   ++L  + P+ S  +VLLSNIYA+A  W+ V ++R+ MK   LKK PG
Sbjct: 431 RIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPG 490

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            S IE+  +V+ FT+GD SH    +I    +E+   +  AGY       L D++E EKE 
Sbjct: 491 HSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKES 550

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L+ HSEKLA+AFG++ +  G  IR+ KNLR+C DCHT+ + ISK+  RE+IVRD NRFH
Sbjct: 551 ALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFH 610

Query: 759 HFRNGSCSCGGYW 771
           HFR G CSC  YW
Sbjct: 611 HFRQGLCSCMDYW 623



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 35/304 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA------------------- 41
           ++K+CT    + +G Q HG ++  GF+ D +V NSLV MYA                   
Sbjct: 125 LVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVD 184

Query: 42  ------------KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                       KCG+   +R+LFD +PE+++V+W+++ S Y   +  ++AV  FK +  
Sbjct: 185 VVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQS 244

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G+R NE  + S+I++CA  G   LG + H Y +K G   ++    ALVDMYA+ G+++ 
Sbjct: 245 QGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDK 304

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           AV VF+D+   D +SW A+IAG  +H +++ +LK F  M  + + P   T+T+ L AC+ 
Sbjct: 305 AVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSH 364

Query: 210 MELKELGRQLHCSLIKMEIKSDP-IVGVG-LVDMYAKCGSMDEARMIFHLMPEK-NLIAW 266
             L E G Q+  S+ K + + +P +   G +VD+  + G ++EA      MP K N   W
Sbjct: 365 GGLVERGFQIFESM-KRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVW 423

Query: 267 NIVI 270
             ++
Sbjct: 424 GALL 427



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 217/472 (45%), Gaps = 41/472 (8%)

Query: 118 IHGYSIKLGYDSDMFSANAL----VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           IH Y I+     D+F+A+ L    VD  +    ++ A  +F  I++P++  +NA+I G  
Sbjct: 36  IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHS 95

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
             ++ D A   + Q +   + P+  T+   +K+C  +    +G Q H  +IK   + D  
Sbjct: 96  GSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVY 155

Query: 234 VGVGLVDMYA-------------------------------KCGSMDEARMIFHLMPEKN 262
           V   LV MYA                               KCG ++ AR +F  MPEKN
Sbjct: 156 VQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKN 215

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           L+ W+ +ISG+ QN    +A  LF  +  +GV  ++T + +V+ S A   A+ + ++ H 
Sbjct: 216 LVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHD 275

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             VK     +  +  +L+D Y +CG ++ AV +F++    D ++ T++I   A  G  E 
Sbjct: 276 YVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSER 335

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAG-NSLV 441
           +LK +  M +  + P     +++L+AC++    E+G Q+   + +   +         +V
Sbjct: 336 SLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMV 395

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
           ++  + G +++A+R   ++P +     W A++G    H +  E  +  G++L   +LP H
Sbjct: 396 DLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIH-KNAEIGERVGKILIQ-LLPQH 453

Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
                +L          E       M K  G++    H   +I++ GR  KF
Sbjct: 454 SGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGH--SLIELDGRVHKF 503



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 72/442 (16%)

Query: 17  VHGIVVFTGFDSDEFVANSLV---VMYAKCGNFID-SRRLFDAIPERSVVSWNSLFSCYV 72
           +H  ++ T    D F A+ L+   V  +   + ID + R+F  I   ++  +N++   + 
Sbjct: 36  IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHS 95

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
                ++A  F+ +    G+ P+  +   ++ +C       +G + HG+ IK G++ D++
Sbjct: 96  GSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVY 155

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI----------------------- 169
             N+LV MYA  G+ E A  +F+ + + D+VSW ++I                       
Sbjct: 156 VQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKN 215

Query: 170 --------AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
                   +G   + H D A++LF+ ++S  +  N     S + +CA +   ELG + H 
Sbjct: 216 LVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHD 275

Query: 222 SLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME 281
            ++K  +  + I+G  LVDMYA+CGS+D+A  +F  +PE++ ++W  +I+G   +G    
Sbjct: 276 YVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSER 335

Query: 282 AASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES--DDYIVNSL 339
           +   F  M   G+     T + VL + +    +    Q+        FES   D+ V   
Sbjct: 336 SLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQI--------FESMKRDHRVEPR 387

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
           ++ YG                         M+    + G  EEA +  L+M    + P++
Sbjct: 388 LEHYG------------------------CMVDLLGRAGKLEEAERFVLKM---PVKPNA 420

Query: 400 FVCSSLLNACANLSAYEQGKQV 421
            V  +LL AC      E G++V
Sbjct: 421 PVWGALLGACRIHKNAEIGERV 442



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 4/182 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+ +C     L LG + H  VV  G   +  +  +LV MYA+CG+   +  +F+ +PER 
Sbjct: 257 VISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERD 316

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            +SW +L +      + E ++ +F  MV +G+ P + + +++++AC+  G    G +I  
Sbjct: 317 TLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFE 376

Query: 121 YSIKLGY--DSDMFSANALVDMYAKVGNLEDAVA-VFKDIEHPDIVSWNAVIAGCVLHEH 177
            S+K  +  +  +     +VD+  + G LE+A   V K    P+   W A++  C +H++
Sbjct: 377 -SMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKN 435

Query: 178 ND 179
            +
Sbjct: 436 AE 437


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/671 (35%), Positives = 386/671 (57%), Gaps = 3/671 (0%)

Query: 18  HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFL 77
           H + + +G  +  + AN+++  YAKCG    + ++F    +R  VSWN++ + +V+    
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 78  EEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANAL 137
           E A+ F K M   G   + +S  S++   A  G   +G+++H   +K+GY+ ++F+ +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNM 197
           +DMYAK   +EDA  VFK I   + V+WNA+I+G         A  L   M+   +  + 
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 198 FTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH- 256
            T+   L      +L +L  Q+H  ++K  + SD  V   ++  Y++CGS+++A  +F  
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
            +  ++L+ WN +++ +L N  + EA  LF  M   G   D  T ++V+ +       G 
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQ 321

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKC--GHVEDAVKIFKESSAVDLVACTSMITAY 374
            K +H L +K   E    I NSLI  Y K     +++A+ IF+     D V+  S++T +
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           +Q GL E+ALK +  M+ + +  D +  S++L +C++L+  + G+QVHV ++K GF  + 
Sbjct: 382 SQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNG 441

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
           F  +SL+ MY+KCG I+DA ++F   P    ++W+++I G AQHGRGK AL +F  M + 
Sbjct: 442 FVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDR 501

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
            V  +HIT V+VL AC+H GLV E     +SME  +GI P  EHYACMID+LGRAG+  E
Sbjct: 502 RVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDE 561

Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
           A  L++ MPF+ +A VW  LLGA R   ++E+    A  L  +EPE+  T+VLLS+++  
Sbjct: 562 AKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGH 621

Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
              W+  A ++R MK+  +KK PG SWIEVK++V +F   DRSH   +EIY +L E+ + 
Sbjct: 622 LRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEE 681

Query: 675 LNKAGYVPMVE 685
           + +  YV   E
Sbjct: 682 IRRLDYVANSE 692



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 251/498 (50%), Gaps = 5/498 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK       + +G QVH ++V  G++ + F  ++L+ MYAKC    D+  +F +I  R+
Sbjct: 106 ILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRN 165

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+WN+L S Y        A      M L G+  ++ + + ++          L  ++H 
Sbjct: 166 SVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHA 225

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKD-IEHPDIVSWNAVIAGCVLHEHND 179
             +K G  SD    NA++  Y++ G++EDA  VF   IE  D+V+WN+++A  +++   +
Sbjct: 226 KIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEE 285

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A +LF +M+     P+++TYTS + A      +  G+ LH  +IK  ++    +   L+
Sbjct: 286 EAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLI 345

Query: 240 DMYAK--CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
            MY K    SMDEA  IF  +  K+ ++WN +++G  Q+G   +A   F  M  + V  D
Sbjct: 346 AMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVID 405

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
               S VL+S +    + + +QVH L +K+ FE + ++ +SLI  Y KCG +EDA K F 
Sbjct: 406 HYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFD 465

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
            +     +A  S+I  YAQ G G+ AL L+  M+DR +  D     ++L AC+++   E+
Sbjct: 466 ATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEE 525

Query: 418 GKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           G      +   +G          ++++  + G +D+A      +P +   + W  ++G  
Sbjct: 526 GWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGAC 585

Query: 476 AQHGRGKEALQMFGQMLE 493
              G  + A Q+   +LE
Sbjct: 586 RTCGDIELASQVASHLLE 603



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 100/190 (52%)

Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
           S +SF A+      H L++K+   +  Y  N++I  Y KCG +  A K+F E+S  D V+
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVS 67

Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
             +MI  +   G  E AL+    M+      D +   S+L   A +   E G+QVH  ++
Sbjct: 68  WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMV 127

Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
           K G+  + FAG++L++MYAKC  ++DA   F  I  R  V+W+A+I G AQ G    A  
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187

Query: 487 MFGQMLEDGV 496
           +   M  +GV
Sbjct: 188 LLDCMELEGV 197


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/682 (36%), Positives = 381/682 (55%), Gaps = 10/682 (1%)

Query: 8   KKDLFLGLQVHG-IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNS 66
           +K L  G  +H  I+      S  ++AN+L+  YAKCG+   ++ +F+ +  ++VVS+N 
Sbjct: 20  QKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNC 79

Query: 67  LFSCYVH-----CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA-GSGDSLLGRKIHG 120
           L     H      +F+ E    F+ M+ + I P+  +   +  A A   G +   R++H 
Sbjct: 80  LIHGLSHNGSKGSNFVLE---LFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHV 136

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             IK     D+F  ++LV+ Y KVG + +A  +F  +   ++VSW  +I+G    +    
Sbjct: 137 LGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKE 196

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL +F  M+  E N N F +TS L A    E  + G+Q+HC ++K  +     V   LV 
Sbjct: 197 ALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVT 256

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG+++ + M+F +  +KN I W+ +I+G+ Q G   +A  LF  M+  G    + T
Sbjct: 257 MYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFT 316

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           L  VLK+ +   AI   KQ H   +K+ +E+  Y   +L+D Y K G   DA K F    
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL 376

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DLV  TS+I  Y Q G  EEAL +Y  MQ R+I P+    +S+L AC+NL+A EQGKQ
Sbjct: 377 EPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQ 436

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H   IK+G   +    ++L  MYAKCGS+++    F  +  R IVSW+AMI GL+Q+G 
Sbjct: 437 IHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGH 496

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
           G+EAL++F +M  +G  P+HIT V+VL AC+H G+V     +F  M  +F + P  EHYA
Sbjct: 497 GREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYA 556

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+L RAGK  EA E +++        +W  LL A R + N E+G +A E L  +   
Sbjct: 557 CMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSR 616

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
           +SS +VLLS+IY + G   +V +VRR MK   ++KE G SWIE+K  V+ F VGD+ H +
Sbjct: 617 ESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQ 676

Query: 661 SKEIYAKLDEVSDLLNKAGYVP 682
            +EI   +  +   +   GY P
Sbjct: 677 IEEIQGAIWRLRKHMKDDGYRP 698



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/404 (33%), Positives = 213/404 (52%), Gaps = 15/404 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL A    + +  G QVH +VV  G      V N+LV MYAKCGN   S  LF+   +++
Sbjct: 219 VLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKN 278

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            ++W++L + Y       +A+  F +M  +G  P+EF+L  ++ AC+       G++ HG
Sbjct: 279 AITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHG 338

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y +K GY++ +++A ALVDMYAK G   DA   F  +  PD+V W ++IAG V +  N+ 
Sbjct: 339 YLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEE 398

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL ++ +M+  +I PN  T  S LKAC+ +   E G+Q+H   IK  +  +  +   L  
Sbjct: 399 ALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALST 458

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCGS++E  +IF  M ++++++WN +ISG  QNG   EA  LF  M  EG   D  T
Sbjct: 459 MYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHIT 518

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVN-----SLIDAYGKCGHVEDAVKI 355
             TVL + +    +G+ K+  A      F+    +        ++D   + G + +A K 
Sbjct: 519 FVTVLSACSH---MGIVKRGWAY-FNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEA-KE 573

Query: 356 FKESSAVDLVACTSMITAYA-----QFGLGEEALKLYLEMQDRE 394
           F ES+ +D   C   I   A      + LG  A +  +E+  RE
Sbjct: 574 FIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRE 617



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD-TFAGNSLVNMYAKCGSIDDADR 455
           P +    +LL   A+  + ++G+ +H HIIK  ++S   +  N+L+  YAKCG +  A  
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 456 AFSEIPDRGIVSWSAMIGGLAQHG-RGKE-ALQMFGQMLEDGVLPNHITLVSVLCA 509
            F  +  + +VS++ +I GL+ +G +G    L++F +M+ + +LP+  T   V  A
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA 120


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/587 (40%), Positives = 353/587 (60%), Gaps = 12/587 (2%)

Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEI-KSDPIVGVGLVDMYAKCGSMDEARM 253
           P   TY S L A A      L   +H  L    + +SDP +   L++ YA   ++  AR 
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQ 305

Query: 254 IFHLMPEKNLIAWNIVISG-HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK-----S 307
           +F   P KN+  WN ++    L + G+ EA +    M R GV  D  + +  LK     S
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGE-EALTCLADMGRLGVPVDSYSYAHGLKACIAAS 364

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
            +   A    +++HA +++  +    ++  +LID Y K G V  A ++F      +LV+ 
Sbjct: 365 ASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSW 424

Query: 368 TSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
           ++MI  YA+     +A++++ EM   D ++ P+S    S+L+ACA ++A  QGK +H +I
Sbjct: 425 SAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYI 484

Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHGRGKEA 484
           ++ GF       N+L+ MY KCG ++     F+ I   R +VSW+++I G   HG G+E+
Sbjct: 485 LRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRES 544

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           LQ+F +M+E+G+ PN IT VSVL AC+H GLV + K  FESM  ++ + P  EHYACM+D
Sbjct: 545 LQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESM-VEYNVTPRAEHYACMVD 603

Query: 545 ILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSST 604
           +LGRAG+  EA+EL+ +M  Q +  VWG+LLGA RI+ +VE  + A   LF +EP  +  
Sbjct: 604 LLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGN 663

Query: 605 HVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEI 664
           +VLL++IYA A + + V  ++  ++++ L+K PG SWIEVK K+Y+F   D  + + +E+
Sbjct: 664 YVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEEL 723

Query: 665 YAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRV 724
            A + E    +   GYVP   + L+D+EE EKE++L  HSEKLAVAFGLI T  G  IR+
Sbjct: 724 QALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRI 783

Query: 725 KKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            KNLR+C DCH+  +FISK   REI+VRDVNRFHHFRNG CSC  YW
Sbjct: 784 TKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 186/377 (49%), Gaps = 31/377 (8%)

Query: 1   VLKACTSKKDLFLGLQVHG-IVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           +L A    +D  L   VH  +     F SD F++  L+  YA       +R++FD  P +
Sbjct: 254 LLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVK 313

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG---- 115
           ++  WN++       D  EEA+    +M   G+  + +S +  + AC  +  S L     
Sbjct: 314 NIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASAR 373

Query: 116 -RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
            R++H ++I+ GY      A  L+D YAK+G +  A  VF  +   ++VSW+A+I     
Sbjct: 374 VREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAK 433

Query: 175 HEHNDWALKLFQQMKSSEIN--PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           +E    A+++FQ+M +S+ +  PN  T  S L ACAG+     G+ LH  +++     D 
Sbjct: 434 NERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGF--DL 491

Query: 233 IVGV--GLVDMYAKCGSMDEARMIFHLM-PEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
           +V V   L+ MY KCG ++  R IF+ +   +N+++WN +ISG+  +G   E+  +F  M
Sbjct: 492 LVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEM 551

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV-KTAFES-DDYIVNS-------LI 340
             EG+  +  T  +VL         G C  V  +   K  FES  +Y V         ++
Sbjct: 552 IEEGISPNIITFVSVL---------GACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMV 602

Query: 341 DAYGKCGHVEDAVKIFK 357
           D  G+ G +++AV++ +
Sbjct: 603 DLLGRAGRLDEAVELIQ 619



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 2/183 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PER 59
           VL AC     L  G  +H  ++  GFD    V N+L+ MY KCG     R +F+ I   R
Sbjct: 464 VLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRR 523

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           +VVSWNSL S Y    F  E++  F+EM+  GI PN  +  S++ AC+  G    G+K+ 
Sbjct: 524 NVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLF 583

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
              ++            +VD+  + G L++AV + + +   P    W +++  C +H H 
Sbjct: 584 ESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHV 643

Query: 179 DWA 181
           ++A
Sbjct: 644 EYA 646


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/708 (34%), Positives = 399/708 (56%), Gaps = 4/708 (0%)

Query: 1   VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
           ++KAC + K+ F G++ +   V   G D +EFVA+SL+  Y + G    + +LFD + ++
Sbjct: 140 LVKACVALKN-FKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQK 198

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
             V WN + + Y  C   +  +  F  M +  I PN  +   +++ CA      LG ++H
Sbjct: 199 DCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 258

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
           G  +  G D +    N+L+ MY+K G  +DA+ +F+ +   D V+WN +I+G V     +
Sbjct: 259 GLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLME 318

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            +L  F +M SS + P+  T++S L + +  E  E  RQ+HC +++  I  D  +   L+
Sbjct: 319 ESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALI 378

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           D Y KC  +  A+ IF      +++ +  +ISG+L NG +++A  +F W+ +  +  ++ 
Sbjct: 379 DAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEI 438

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL ++L  +    A+ + +++H   +K  F++   I  ++ID Y KCG +  A +IF   
Sbjct: 439 TLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRL 498

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
           S  D+V+  SMIT  AQ      A+ ++ +M    I  D    S+ L+ACANL +   GK
Sbjct: 499 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGK 558

Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +H  +IK     D ++ ++L++MYAKCG++  A   F  + ++ IVSW+++I     HG
Sbjct: 559 AIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHG 618

Query: 480 RGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           + K++L +F +M+E  G  P+ IT + ++  C H G V E    F SM + +GIQP QEH
Sbjct: 619 KLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEH 678

Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
           YAC++D+ GRAG+  EA E V +MPF  +A VWG LLGA+R++KNVE+ + A+  L  ++
Sbjct: 679 YACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLD 738

Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
           P  S  +VL+SN +A+ G W++V KVR  MK+ +++K PG SWIE+    + F  GD +H
Sbjct: 739 PWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNH 798

Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEK 706
             S  IY+ L+ + + L   GY+P     LH  E S K   +    EK
Sbjct: 799 PESSHIYSLLNSLLEELRLEGYIPQPYLPLHP-ESSRKVNPVSRFIEK 845



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 178/587 (30%), Positives = 305/587 (51%), Gaps = 20/587 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           +L+ C++   L  G QVH  V+      D +    ++ MYA CG+F +  ++F  +  R 
Sbjct: 37  LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96

Query: 60  -SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG----SGDSLL 114
            S+  WNS+ S +V    L +A+ F+ +M+  G+ P+  +   ++ AC       G   L
Sbjct: 97  SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156

Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
              +      LG D + F A++L+  Y + G ++ A  +F  +   D V WN ++ G   
Sbjct: 157 SDTVSS----LGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAK 212

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
              +D  +K F  M+  +I+PN  T+   L  CA   L +LG QLH  ++   +  +  +
Sbjct: 213 CGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSI 272

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              L+ MY+KCG  D+A  +F +M   + + WN +ISG++Q+G   E+   F  M   GV
Sbjct: 273 KNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T S++L SV+ F+ +  C+Q+H   ++ +   D ++ ++LIDAY KC  V  A K
Sbjct: 333 LPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQK 392

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           IF + ++VD+V  T+MI+ Y   GL  +AL+++  +   +I+P+     S+L     L A
Sbjct: 393 IFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLA 452

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            + G+++H  IIK GF +    G ++++MYAKCG ++ A   F  +  R IVSW++MI  
Sbjct: 453 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITR 512

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE----AKHHFESMEKKF 530
            AQ      A+ +F QM   G+  + +++ + L AC  A L +E    A H F  ++   
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSAC--ANLPSESFGKAIHGF-MIKHSL 569

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            +    E  + +ID+  + G  + AM + DTM  + N   W +++ A
Sbjct: 570 ALDVYSE--STLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSIIAA 613



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 222/463 (47%), Gaps = 5/463 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK--D 156
           LS ++  C+       G+++H + I      D ++   ++ MYA  G+  +   +F   D
Sbjct: 34  LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93

Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
                I  WN++I+  V     + AL  + +M    ++P++ T+   +KAC  ++  +  
Sbjct: 94  SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
             L  ++  + +  +  V   L+  Y + G +D A  +F  + +K+ + WN++++G+ + 
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G        F  M  + +  +  T   VL   AS   I +  Q+H L V +  + +  I 
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIK 273

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           NSL+  Y KCG  +DA+K+F+  S  D V    MI+ Y Q GL EE+L  + EM    + 
Sbjct: 274 NSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVL 333

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD+   SSLL + +     E  +Q+H +I++     D F  ++L++ Y KC  +  A + 
Sbjct: 334 PDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKI 393

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           FS+     +V ++AMI G   +G   +AL+MF  +++  + PN ITLVS+L      GL+
Sbjct: 394 FSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVI--GGLL 451

Query: 517 A-EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           A +          K G          +ID+  + G+   A E+
Sbjct: 452 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 494



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 32/341 (9%)

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK--E 358
           LS +L+  ++   +   KQVHA  +      D Y    ++  Y  CG   +  K+F   +
Sbjct: 34  LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
           S    +    S+I+++ + GL  +AL  Y +M    ++PD      L+ AC  L  ++  
Sbjct: 94  SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           + +   +   G   + F  +SL+  Y + G ID A + F  +  +  V W+ M+ G A+ 
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA----------GLVAEAKHHFESMEK 528
           G     ++ F  M  D + PN +T   VL  C             GLV  +   FE   K
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIK 273

Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
                        ++ +  + G+F +A++L   M  +A+   W  ++        V+ G 
Sbjct: 274 N-----------SLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNCMISGY-----VQSGL 316

Query: 589 HAAEMLFAIEPEKSST---HVLLSNIYASAGMWDNVAKVRR 626
               ++F  E   S      +  S++  S   ++N+   R+
Sbjct: 317 MEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQ 357


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/562 (39%), Positives = 337/562 (59%), Gaps = 7/562 (1%)

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYA--KCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
           +Q H  L++  +  +P+    L+   A    G ++ AR +F  M   +    N +I G+ 
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
           ++    EA SL+ +M   GV  D  T   VL + A   A+ + ++ H   +K  F SD +
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
           ++N+LI  Y  CG    A  +F ES+  D+V    MI A+   GL E+A  L  EM   +
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 395 -INPDSFVCSSLLNACANLSAYEQGKQVHVH---IIKFGFMSDTFAGNSLVNMYAKCGSI 450
            + PD     SL+ ACA L   E+GK +H +   + KF    D     +LV+MYAKCGSI
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSI 267

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           D A + F  +  R + +W+A+IGGLA HG G++A+ +F QM  D ++P+ +T +++LCAC
Sbjct: 268 DLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCAC 327

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
           +HAGLV E    F++M+ KF I+P  EHY C++D+L RA K  +A+  ++ MP +AN+ +
Sbjct: 328 SHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVL 387

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           W  LLGA R   + ++ +     +  +EP+    +V+LSN+YA    WD+  K+R+ MK+
Sbjct: 388 WATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKN 447

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN-KAGYVPMVETDLH 689
             ++K PG SWIE+   ++ F  GDRSH ++++IYA ++E++  +N   G+VP     L 
Sbjct: 448 KGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLF 507

Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           D+EE EKE  L+ HSEKLA+A GLI+TP G+ IR+ KNLR+C DCH+  +  SK+ +REI
Sbjct: 508 DIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREI 567

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           + RD +RFHHF+ GSCSC  +W
Sbjct: 568 VARDRSRFHHFKEGSCSCMDFW 589



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 156/289 (53%), Gaps = 7/289 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     + LG + H  V+  GF SD FV N+L+  Y  CG+F  +  +FD    R 
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VV+WN + + +++    E+A     EM  L  +RP+E ++ S++ ACA  G+   G+ +H
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236

Query: 120 GYSIKLG---YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
            YS +L     + D+    ALVDMYAK G+++ A+ VF+ +   ++ +WNA+I G  +H 
Sbjct: 237 SYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG 296

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVG 235
           H + A+ LF QM+  ++ P+  T+ + L AC+   L + G  +  ++  K +I+      
Sbjct: 297 HGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHY 356

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAA 283
             +VD+  +   +D+A      MP K N + W  ++ G  ++GG  + A
Sbjct: 357 GCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GACRSGGHFDLA 404



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 187/422 (44%), Gaps = 42/422 (9%)

Query: 16  QVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           Q H +++ T    +   ++ L+   A    G+   +R+LF  +        N++   Y  
Sbjct: 29  QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                EAV  +  MV  G+  + ++   ++ ACA  G   LGR+ H   +K G+ SD+F 
Sbjct: 89  SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSE 192
            NAL+  Y   G+   A  VF +    D+V+WN +I   +    ++ A  L  +M K   
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHC---SLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
           + P+  T  S + ACA +   E G+ LH     L K EI  D ++   LVDMYAKCGS+D
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSID 268

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL---- 305
            A  +F  M  +N+  WN +I G   +G   +A SLF  M  + +  D  T   +L    
Sbjct: 269 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 328

Query: 306 ------KSVASFQAIGVCKQVHALS---------VKTAFESDD---YIVNSLIDA----- 342
                 + +A FQA+    Q+             +  A + DD   +I N  I A     
Sbjct: 329 HAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLW 388

Query: 343 ---YGKC---GHVEDAVKIFKESSAVDLVACTSMI---TAYAQFGLGEEALKLYLEMQDR 393
               G C   GH + A KI +    ++  +C   +     YA     + ALKL  +M+++
Sbjct: 389 ATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNK 448

Query: 394 EI 395
            I
Sbjct: 449 GI 450



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 163/347 (46%), Gaps = 18/347 (5%)

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G+L  A  +F  +++PD    N +I G    ++   A+ L+  M    +  + +TY   L
Sbjct: 59  GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
            ACA +   +LGR+ HC ++K    SD  V   L+  Y  CGS   A  +F     ++++
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
            WNI+I+ HL  G   +A  L   M + + +  D+ T+ +++ + A    +   K +H+ 
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSY 238

Query: 324 SV---KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
           S    K     D  +  +L+D Y KCG ++ A+++F+     ++    ++I   A  G G
Sbjct: 239 SKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHG 298

Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS- 439
           E+A+ L+ +M+  ++ PD     +LL AC++    ++G      +  F  M + F     
Sbjct: 299 EDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG------LAMFQAMKNKFQIEPR 352

Query: 440 ------LVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMIGGLAQHG 479
                 +V++  +   +DDA      +P +   V W+ ++G     G
Sbjct: 353 MEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGG 399


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/536 (40%), Positives = 332/536 (61%), Gaps = 10/536 (1%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGF 296
           L+  +  CG +D AR +F  MP K++ +WN ++SG  +NG   EAA++F  M  R  V +
Sbjct: 83  LLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSW 142

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +          VA+    G       L      ++D  +  +++  Y   G+V+ A++ F
Sbjct: 143 NAM--------VAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFF 194

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAY 415
                 +LV+  +++  Y +    ++AL+++  M +D  + P++   SS+L  C+NLSA 
Sbjct: 195 GAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSAL 254

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
             G+QVH   +K     +   G SL++MY KCG ++DA + F E+  + IV+W+AMI G 
Sbjct: 255 GFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGY 314

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQHG G +A+++F +M ++GV+P+ ITL++VL AC H GL       FE+M++ + I+P 
Sbjct: 315 AQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQ 374

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            +HY+CM+D+L RAG  + A+ ++ +MPF+ + S +G LL A R+YKN+E  + AA  L 
Sbjct: 375 IDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLI 434

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
             +P+ +  +V L+NIYA A  W +V++VRR+MKDN + K PG SW+E+K   + F   D
Sbjct: 435 EQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSND 494

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           R H +   I+ KLD +  L+   GYVP ++  LHDVE+S K Q+L  HSEKLA+AFGLI+
Sbjct: 495 RLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLIS 554

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG T+R+ KNLRIC DCH + + ISKI  REII+RD  RFHHFR G CSCG YW
Sbjct: 555 TSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 172/339 (50%), Gaps = 17/339 (5%)

Query: 26  FDS----DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAV 81
           FDS    D    N+L+  +  CG+   +RR+F  +P + V SWN++ S        EEA 
Sbjct: 69  FDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAA 128

Query: 82  CFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMY 141
             F+ M +     N  S ++M+ A A SGD      +   + +    +D     A+V  Y
Sbjct: 129 AMFRIMPVR----NAVSWNAMVAALACSGDMGAAEDLFRNAPE---KTDAILWTAMVSGY 181

Query: 142 AKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTY 200
              GN++ A+  F  +   ++VSWNAV+AG V +   D AL++F+ M + S + PN  T 
Sbjct: 182 MDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTL 241

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
           +S L  C+ +     GRQ+H   +K+ +  +  VG  L+ MY KCG +++A  +F  M  
Sbjct: 242 SSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMST 301

Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV--ASFQAIGV-C 317
           K+++AWN +ISG+ Q+GG M+A  LF  M  EGV  D  TL  VL +         G+ C
Sbjct: 302 KDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQC 361

Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
            +    + K   + D Y  + ++D   + G +E AV + 
Sbjct: 362 FETMQEAYKIEPQIDHY--SCMVDLLCRAGLLERAVNMI 398



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 27/233 (11%)

Query: 295 GFDQTTLSTVLKSVASF--------QAIGVCKQVHALSVKTAFESDDYI-VNSLIDAYGK 345
           G ++   ST LK+  ++        +A G+ +   A  +  +    D +  N+L+  +  
Sbjct: 30  GAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFA 89

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFV--- 401
           CG ++ A ++F      D+ +  +M++  ++ G  EEA  ++  M  R  ++ ++ V   
Sbjct: 90  CGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAAL 149

Query: 402 -CSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
            CS  + A  +L      K            +D     ++V+ Y   G++  A   F  +
Sbjct: 150 ACSGDMGAAEDLFRNAPEK------------TDAILWTAMVSGYMDTGNVQKAMEFFGAM 197

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL-PNHITLVSVLCACNH 512
           P R +VSW+A++ G  ++ R  +AL++F  M+ED ++ PN  TL SVL  C++
Sbjct: 198 PVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSN 250



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C++   L  G QVH   +      +  V  SL+ MY KCG+  D+ ++FD +  + 
Sbjct: 244 VLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKD 303

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           +V+WN++ S Y       +A+  F++M   G+ P+  +L +++ AC  +G    G +   
Sbjct: 304 IVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFE 363

Query: 119 ---HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
                Y I+   D      + +VD+  + G LE AV +   +   P   ++  ++  C +
Sbjct: 364 TMQEAYKIEPQID----HYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRV 419

Query: 175 HEHNDW----ALKLFQQ 187
           +++ ++    A KL +Q
Sbjct: 420 YKNLEFAEFAARKLIEQ 436



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 11/145 (7%)

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           DT + N+L++ +  CG ID A R FS +P + + SW+ M+ GL+++G  +EA  MF  M 
Sbjct: 76  DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIM- 134

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGK 551
               + N ++  +++ A   +G +  A+  F +  EK   I      +  M+      G 
Sbjct: 135 ---PVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAIL-----WTAMVSGYMDTGN 186

Query: 552 FQEAMELVDTMPFQANASVWGALLG 576
            Q+AME    MP + N   W A++ 
Sbjct: 187 VQKAMEFFGAMPVR-NLVSWNAVVA 210


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/656 (35%), Positives = 362/656 (55%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           ++IH   I      D F  N L+         + +  +F   + P+I  +N++I G V +
Sbjct: 30  KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
                 L LF  ++   +  + FT+   LKAC     ++LG  LH  ++K     D    
Sbjct: 90  HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ +Y+  G +++A  +F  +P+++++ W  + SG+  +G   EA  LF  M   GV 
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D   +  VL +      +   + +     +   + + ++  +L++ Y KCG +E A  +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      D+V  ++MI  YA     +E ++L+L+M    + PD F     L++CA+L A 
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + G+     I +  F+++ F  N+L++MYAKCG++      F E+ ++ IV  +A I GL
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           A++G  K +  +FGQ  + G+ P+  T + +LC C HAGL+ +    F ++   + ++  
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            EHY CM+D+ GRAG   +A  L+  MP + NA VWGALL   R+ K+ ++ +   + L 
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
           A+EP  +  +V LSNIY+  G WD  A+VR  M    +KK PG SWIE++ KV+ F   D
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           +SH  S +IYAKL+++ + +   G+VP  E    DVEE EKE++L +HSEKLAVA GLI+
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIS 629

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T  G  IRV KNLR+C DCH   + ISKI  REI+VRD NRFH F NGSCSC  YW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 223/472 (47%), Gaps = 48/472 (10%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKACT      LG+ +H +VV  GF+ D     SL+ +Y+  G   D+ +LFD IP+RS
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+W +LFS Y       EA+  FK+MV  G++P+ + +  +++AC   GD   G  I  
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y  ++    + F    LV++YAK G +E A +VF  +   DIV+W+ +I G   +     
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            ++LF QM    + P+ F+    L +CA +   +LG      + + E  ++  +   L+D
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG+M     +F  M EK+++  N  ISG  +NG    + ++F    + G+  D +T
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
              +L           C  VHA                        G ++D ++ F   S
Sbjct: 417 FLGLL-----------CGCVHA------------------------GLIQDGLRFFNAIS 441

Query: 361 AVDLVACT-----SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
            V  +  T      M+  + + G+ ++A +L  +M  R   P++ V  +LL+ C  +   
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR---PNAIVWGALLSGCRLVKDT 498

Query: 416 EQGKQVHVHIIKFGFMSDTFAGN--SLVNMYAKCGSIDDADRAFSEIPDRGI 465
           +  + V   +I    +    AGN   L N+Y+  G  D+A      +  +G+
Sbjct: 499 QLAETVLKELIA---LEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 547


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/660 (35%), Positives = 359/660 (54%), Gaps = 38/660 (5%)

Query: 150 AVAVFKDIEHP-DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           A+ VF  I  P + + +N  +            +  +Q+++      + F++   LKA +
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
            +     G +LH    K+    DP V  G +DMYA CG ++ AR +F  M  ++++ WN 
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I  + + G   EA  LF  M    V  D+  L  ++ +      +   + ++   ++  
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242

Query: 329 FESDDYIVNSLI-------------------------------DAYGKCGHVEDAVKIFK 357
              D +++ +L+                                 Y KCG ++DA  IF 
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           ++   DLV  T+MI+AY +    +EAL+++ EM    I PD     S+++ACANL   ++
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
            K VH  I   G  S+    N+L+NMYAKCG +D     F ++P R +VSWS+MI  L+ 
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG   +AL +F +M ++ V PN +T V VL  C+H+GLV E K  F SM  ++ I P  E
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY CM+D+ GRA   +EA+E++++MP  +N  +WG+L+ A RI+  +E+G+ AA+ +  +
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           EP+     VL+SNIYA    W++V  +RR M++  + KE G+S I+   K + F +GD+ 
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI--- 714
           H +S EIYAKLDEV   L  AGYVP   + L DVEE EK+ L+  HSEKLA+ FGL+   
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEE 662

Query: 715 ---ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
                     IR+ KNLR+C DCH  F+ +SK+  REIIVRD  RFH ++NG CSC  YW
Sbjct: 663 KEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 212/433 (48%), Gaps = 48/433 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKA +    LF G+++HG+        D FV    + MYA CG    +R +FD +  R 
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN++   Y     ++EA   F+EM  S + P+E  L ++++AC  +G+    R I+ 
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236

Query: 121 YSIKLGYDSD-------------------------------MFSANALVDMYAKVGNLED 149
           + I+     D                               +F + A+V  Y+K G L+D
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
           A  +F   E  D+V W  +I+  V  ++   AL++F++M  S I P++ +  S + ACA 
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           + + +  + +H  +    ++S+  +   L++MYAKCG +D  R +F  MP +N+++W+ +
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+    +G   +A SLF  M +E V  ++ T   VL   +    +   K++ A       
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM----- 471

Query: 330 ESDDYIVNS-------LIDAYGKCGHVEDAVKIFKESS-AVDLVACTSMITA---YAQFG 378
            +D+Y +         ++D +G+   + +A+++ +    A ++V   S+++A   + +  
Sbjct: 472 -TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530

Query: 379 LGEEALKLYLEMQ 391
           LG+ A K  LE++
Sbjct: 531 LGKFAAKRILELE 543



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 199/439 (45%), Gaps = 45/439 (10%)

Query: 80  AVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVD 139
            + F++ +   G R ++FS   ++ A +       G ++HG + K+    D F     +D
Sbjct: 95  TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154

Query: 140 MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFT 199
           MYA  G +  A  VF ++ H D+V+WN +I         D A KLF++MK S + P+   
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA---------------- 243
             + + AC         R ++  LI+ +++ D  +   LV MYA                
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274

Query: 244 ---------------KCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
                          KCG +D+A++IF    +K+L+ W  +IS ++++    EA  +F  
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGH 348
           M   G+  D  ++ +V+ + A+   +   K VH+       ES+  I N+LI+ Y KCG 
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394

Query: 349 VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
           ++    +F++    ++V+ +SMI A +  G   +AL L+  M+   + P+      +L  
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454

Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEIP 461
           C++    E+GK++      F  M+D +           +V+++ +   + +A      +P
Sbjct: 455 CSHSGLVEEGKKI------FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508

Query: 462 -DRGIVSWSAMIGGLAQHG 479
               +V W +++     HG
Sbjct: 509 VASNVVIWGSLMSACRIHG 527



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 7/220 (3%)

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI---DAYGKCGHVEDAVKI 355
           T  +T+L+ ++  +++   KQ+HA  ++T     ++ +NS +          ++  A+ +
Sbjct: 10  TAANTILEKLSFCKSLNHIKQLHAHILRTVI---NHKLNSFLFNLSVSSSSINLSYALNV 66

Query: 356 FKE-SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           F    S  + +     +   ++       +  Y  ++      D F    +L A + +SA
Sbjct: 67  FSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSA 126

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
             +G ++H    K   + D F     ++MYA CG I+ A   F E+  R +V+W+ MI  
Sbjct: 127 LFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIER 186

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
             + G   EA ++F +M +  V+P+ + L +++ AC   G
Sbjct: 187 YCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226


>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
          Length = 653

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/566 (39%), Positives = 333/566 (58%), Gaps = 9/566 (1%)

Query: 215 LGRQLHC-SLIKMEIKSD--PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
           LG QLH  ++++  +  D   I+   ++  YA C   D AR +F  MP +N + WN +I 
Sbjct: 88  LGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIK 147

Query: 272 GHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVA----SFQAIGVCKQVHALSV 325
           G+ Q G   EA  LF  M REG  V  D+ T   +L  +     S + + +   +HA  +
Sbjct: 148 GYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVI 207

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   E D ++  SL+  Y     +EDA   F +  + D +  +SMI+AY      E AL 
Sbjct: 208 KAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALL 267

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           ++  M  ++I P  FV S++ + C  +   E GKQVH H +K     D    N+L+ MY+
Sbjct: 268 IFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYS 327

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
            CG I+DA + FS      ++S+++MI  L QHG  KEAL+ F QM   G++P+ +TL++
Sbjct: 328 DCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLN 387

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           ++ + NHAGLV E    F SM    GI+PM +HYAC++D+L R+G+  +AM+ ++ MPF+
Sbjct: 388 LISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFE 447

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
           A A +W  +LGA   ++++E G+  AEMLF +EP +++ ++LL NIYA  G W    KVR
Sbjct: 448 AEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVR 507

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             M +  + K+   SWIE+  + Y F V DRSH  S+EIY  LD +   +  AGYVP + 
Sbjct: 508 SLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVPDIS 567

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
              H+++   KE+ LY+H EKLA AFG +A P G T+R+ KNLR+C DCH ++++ S + 
Sbjct: 568 FAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVT 627

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REII+RD  RFHHF +G CSCG YW
Sbjct: 628 GREIILRDNQRFHHFNSGFCSCGDYW 653



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 232/494 (46%), Gaps = 59/494 (11%)

Query: 1   VLKACTS-------KKDLFLGLQVHGIVVFTGF---DSDEFVANSLVVMYAKCGNFIDSR 50
           +LKA +S          L LG Q+H   V  GF   D    +A +++  YA C     +R
Sbjct: 69  LLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLAR 128

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACA- 107
           ++FD +P R+ V+WN+L   Y      EEA+  F++M   G  + P+ ++  ++++    
Sbjct: 129 KVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGR 188

Query: 108 --GSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS 164
             GSG +L LG  +H + IK G + D F   +LV +YA    LEDA   F  +   D + 
Sbjct: 189 EGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIV 248

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           W+++I+  V  E  + AL +F  M   +I P  F Y++    C  M + E+G+Q+H   +
Sbjct: 249 WSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSL 308

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
           K   + D  +   L+ MY+ CG +++A+ +F      N+I++N +IS   Q+G   EA  
Sbjct: 309 KSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALE 368

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            F  M   G+  D+ TL   L  ++SF         HA  V    +    + NS++D   
Sbjct: 369 HFRQMKFAGLMPDEVTL---LNLISSFN--------HAGLVHEGLQ----MFNSMVD--- 410

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
               +E    +++  + V       M+    + G   +A+K   EM       ++ +   
Sbjct: 411 ----IEGIKPMYQHYACV-----VDMLARSGEIG---KAMKTINEM---PFEAEAPLWRI 455

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPD 462
           +L AC+     E GK++   + +   M    A N ++  N+YA+ G   +A++  S + +
Sbjct: 456 VLGACSKHRDIETGKRIAEMLFE---MEPYEATNYILLGNIYARLGRWTEAEKVRSLMGE 512

Query: 463 RGI-----VSWSAM 471
           RG+      SW  M
Sbjct: 513 RGVYKDDAFSWIEM 526


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/664 (35%), Positives = 384/664 (57%), Gaps = 51/664 (7%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMY----AKVGNLEDAVAVFKDIEHPDIVSWNAVIAG 171
           R+IHG      Y  ++FS++ +V  +    + + +++ A+++F+  E  +   +NA+I G
Sbjct: 59  RQIHGQL----YRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRG 114

Query: 172 CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSD 231
              +   + ++  F  M   +I+P+  T+   LK+ A +    +GR LHC ++K  ++ D
Sbjct: 115 LAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFD 174

Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEK----NLIAWNIVISGHLQNGGDMEAASLFP 287
             V V LVDMY K   +  A  +F   PE     +++ WN++I G+ + G  ++A  LF 
Sbjct: 175 SFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFD 234

Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
            M ++  G                                         NSLI+ + K G
Sbjct: 235 SMPKKDTG---------------------------------------SWNSLINGFMKMG 255

Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
            +  A ++F +    ++V+ T+M+  ++Q G  E+AL+ +  M +    P+ +   S L+
Sbjct: 256 DMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALS 315

Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
           ACA + A + G ++H ++   GF  +   G +LV+MYAKCG+I+ A++ F E  ++G++ 
Sbjct: 316 ACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLI 375

Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
           WS MI G A HG  ++ALQ F  M   G  P+ +  ++VL AC+H+G V E    F++M 
Sbjct: 376 WSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMR 435

Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
           + + I+P  +HY  ++D+LGRAG+  EA++ +  MP   +  VWGAL  A R +KNVE+ 
Sbjct: 436 RGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMA 495

Query: 588 QHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDK 647
           + A++ L  +EP+   ++V LSN YAS G WD+  +VR  M+D+   K+PG S+IEV  K
Sbjct: 496 ELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHK 555

Query: 648 VYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKL 707
           ++ F  GD +H R+ EIY+KLDE+S    + GY   +E  LH++EE EKE+ L +HSEKL
Sbjct: 556 LHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKL 615

Query: 708 AVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSC 767
           A+AFG+++T PG T+R+ KNLR+CVDCH+  ++ SK+  REII+RD+ RFHHF +G CSC
Sbjct: 616 ALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSC 675

Query: 768 GGYW 771
           G YW
Sbjct: 676 GDYW 679



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 190/442 (42%), Gaps = 52/442 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           VLK+  +  +  +G  +H  ++  G + D FV  SLV MY K      + ++FD  PE  
Sbjct: 146 VLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESV 205

Query: 60  ---SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
              SV+ WN L   Y     L +A   F  M      P +                    
Sbjct: 206 KNGSVLIWNVLIHGYCRMGDLVKATELFDSM------PKK-------------------- 239

Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
                        D  S N+L++ + K+G++  A  +F  +   ++VSW  ++ G   + 
Sbjct: 240 -------------DTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNG 286

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
             + AL+ F  M      PN +T  SAL ACA +   + G ++H  L     K + ++G 
Sbjct: 287 DPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGT 346

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LVDMYAKCG+++ A  +FH   EK L+ W+++I G   +G   +A   F WM   G   
Sbjct: 347 ALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKP 406

Query: 297 DQTTLSTVLKSVA-SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
           D      VL + + S Q     K    +      E        ++D  G+ G +++A+K 
Sbjct: 407 DSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKF 466

Query: 356 FKESSAV-DLVACTSMITA---YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
            +      D V   ++  A   +    + E A K  L+++ +  +P S+V   L NA A+
Sbjct: 467 IRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPK--HPGSYVF--LSNAYAS 522

Query: 412 LSAYEQGKQVHVHIIKFGFMSD 433
           +  ++  ++V V +   G   D
Sbjct: 523 VGRWDDAERVRVSMRDHGAHKD 544


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/695 (33%), Positives = 394/695 (56%), Gaps = 17/695 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C SK  +    Q+H   +  G   D FV   L V+YA+  +   + +LF+  P ++
Sbjct: 10  LLETCCSKISI---TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKT 66

Query: 61  VVSWNSLFSCYVHCDFLE----EAVCFFKEMVLSGI---RPNEFSLSSMINACAGSGDSL 113
           V  WN+L   Y    FLE    E +  F +M    +   RP+ +++S  + +C+G     
Sbjct: 67  VYLWNALLRSY----FLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLE 122

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           LG+ IHG+ +K   DSDMF  +AL+++Y+K G + DAV VF +   PD+V W ++I G  
Sbjct: 123 LGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYE 181

Query: 174 LHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            +   + AL  F +M   E ++P+  T  SA  ACA +    LGR +H  + +    +  
Sbjct: 182 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 241

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +   ++++Y K GS+  A  +F  MP K++I+W+ +++ +  NG +  A +LF  M  +
Sbjct: 242 CLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDK 301

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  ++ T+ + L++ AS   +   KQ+H L+V   FE D  +  +L+D Y KC   E+A
Sbjct: 302 RIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENA 361

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           +++F      D+V+   + + YA+ G+  ++L ++  M      PD+     +L A + L
Sbjct: 362 IELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSEL 421

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              +Q   +H  + K GF ++ F G SL+ +YAKC SID+A++ F  +    +V+WS++I
Sbjct: 422 GIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSII 481

Query: 473 GGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
                HG+G+EAL++  QM     V PN +T VS+L AC+HAGL+ E    F  M  ++ 
Sbjct: 482 AAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQ 541

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           + P  EHY  M+D+LGR G+  +A+++++ MP QA   VWGALLGA RI++N+++G+ AA
Sbjct: 542 LMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAA 601

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             LF ++P  +  + LLSNIY     W + AK+R  +K+N+LKK  G S +E+K++V++F
Sbjct: 602 LNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSF 661

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
              DR H  S +IY  L ++   + + GY P ++T
Sbjct: 662 IASDRFHGESDQIYEMLRKLDARMREEGYDPDLQT 696


>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
 gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 654

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/566 (39%), Positives = 333/566 (58%), Gaps = 9/566 (1%)

Query: 215 LGRQLHC-SLIKMEIKSD--PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
           LG QLH  ++++  +  D   I+   ++  YA C   D AR +F  MP +N + WN +I 
Sbjct: 89  LGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIK 148

Query: 272 GHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVA----SFQAIGVCKQVHALSV 325
           G+ Q G   EA  LF  M REG  V  D+ T   +L  +     S + + +   +HA  +
Sbjct: 149 GYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVI 208

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K   E D ++  SL+  Y     +EDA   F +  + D +  +SMI+AY      E AL 
Sbjct: 209 KAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALL 268

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           ++  M  ++I P  FV S++ + C  +   E GKQVH H +K     D    N+L+ MY+
Sbjct: 269 IFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYS 328

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
            CG I+DA + FS      ++S+++MI  L QHG  KEAL+ F QM   G++P+ +TL++
Sbjct: 329 DCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLN 388

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           ++ + NHAGLV E    F SM    GI+PM +HYAC++D+L R+G+  +AM+ ++ MPF+
Sbjct: 389 LISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFE 448

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
           A A +W  +LGA   ++++E G+  AEMLF +EP +++ ++LL NIYA  G W    KVR
Sbjct: 449 AEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVR 508

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             M +  + K+   SWIE+  + Y F V DRSH  S+EIY  LD +   +  AGYVP + 
Sbjct: 509 SLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVPDIS 568

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
              H+++   KE+ LY+H EKLA AFG +A P G T+R+ KNLR+C DCH ++++ S + 
Sbjct: 569 FAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVT 628

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REII+RD  RFHHF +G CSCG YW
Sbjct: 629 GREIILRDNQRFHHFNSGFCSCGDYW 654



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 232/494 (46%), Gaps = 59/494 (11%)

Query: 1   VLKACTS-------KKDLFLGLQVHGIVVFTGF---DSDEFVANSLVVMYAKCGNFIDSR 50
           +LKA +S          L LG Q+H   V  GF   D    +A +++  YA C     +R
Sbjct: 70  LLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLAR 129

Query: 51  RLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG--IRPNEFSLSSMINACA- 107
           ++FD +P R+ V+WN+L   Y      EEA+  F++M   G  + P+ ++  ++++    
Sbjct: 130 KVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGR 189

Query: 108 --GSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVS 164
             GSG +L LG  +H + IK G + D F   +LV +YA    LEDA   F  +   D + 
Sbjct: 190 EGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIV 249

Query: 165 WNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI 224
           W+++I+  V  E  + AL +F  M   +I P  F Y++    C  M + E+G+Q+H   +
Sbjct: 250 WSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSL 309

Query: 225 KMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAAS 284
           K   + D  +   L+ MY+ CG +++A+ +F      N+I++N +IS   Q+G   EA  
Sbjct: 310 KSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALE 369

Query: 285 LFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYG 344
            F  M   G+  D+ TL   L  ++SF         HA  V    +    + NS++D   
Sbjct: 370 HFRQMKFAGLMPDEVTL---LNLISSFN--------HAGLVHEGLQ----MFNSMVD--- 411

Query: 345 KCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSS 404
               +E    +++  + V       M+    + G   +A+K   EM       ++ +   
Sbjct: 412 ----IEGIKPMYQHYACV-----VDMLARSGEIG---KAMKTINEM---PFEAEAPLWRI 456

Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPD 462
           +L AC+     E GK++   + +   M    A N ++  N+YA+ G   +A++  S + +
Sbjct: 457 VLGACSKHRDIETGKRIAEMLFE---MEPYEATNYILLGNIYARLGRWTEAEKVRSLMGE 513

Query: 463 RGI-----VSWSAM 471
           RG+      SW  M
Sbjct: 514 RGVYKDDAFSWIEM 527


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/658 (37%), Positives = 380/658 (57%), Gaps = 59/658 (8%)

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC------VL 174
           Y  K      +F  N ++    + G+++ A+ VF  +   + ++WN+++ G       ++
Sbjct: 51  YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
             H     +LF ++      P+ F+Y   L +C    ++ +  +   S        D   
Sbjct: 111 EAH-----QLFDEIPE----PDTFSYNIML-SCY---VRNVNFEKAQSFFDRMPFKDAAS 157

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
              ++  YA+ G M++AR +F+ M EKN ++WN +ISG+++  GD+E AS F        
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE-CGDLEKASHF-------- 208

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
            F    +  V+   A                             +I  Y K   VE A  
Sbjct: 209 -FKVAPVRGVVAWTA-----------------------------MITGYMKAKKVELAEA 238

Query: 355 IFKESSA-VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
           +FK+ +   +LV   +MI+ Y +    E+ LKL+  M +  I P+S   SS L  C+ LS
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
           A + G+Q+H  + K    +D  A  SL++MY KCG + DA + F  +  + +V+W+AMI 
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
           G AQHG   +AL +F +M+++ + P+ IT V+VL ACNHAGLV     +FESM + + ++
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418

Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
           P  +HY CM+D+LGRAGK +EA++L+ +MPF+ +A+V+G LLGA R++KNVE+ + AAE 
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478

Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
           L  +  + ++ +V L+NIYAS   W++VA+VR+ MK++ + K PG SWIE+++KV+ F  
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538

Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
            DR H     I+ KL E+   +  AGY P +E  LH+VEE +KE+LL  HSEKLAVAFG 
Sbjct: 539 SDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGC 598

Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           I  P G+ I+V KNLRIC DCH + +FIS+I  REIIVRD  RFHHF++GSCSCG YW
Sbjct: 599 IKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 211/482 (43%), Gaps = 76/482 (15%)

Query: 19  GIVVFTGFDSDEFVA-NSLVVMYAK-CGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
            + VF G  +   +  NSL++  +K     +++ +LFD IPE    S+N + SCYV    
Sbjct: 80  ALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVN 139

Query: 77  LEEAVCFF---------------------------KEMVLSGIRPNEFSLSSMINACAGS 109
            E+A  FF                           +E+  S +  NE S ++MI+     
Sbjct: 140 FEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIEC 199

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAV 168
           GD  L +  H +  K+     + +  A++  Y K   +E A A+FKD+  + ++V+WNA+
Sbjct: 200 GD--LEKASHFF--KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255

Query: 169 IAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEI 228
           I+G V +   +  LKLF+ M    I PN    +SAL  C+ +   +LGRQ+H  + K  +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315

Query: 229 KSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPW 288
            +D      L+ MY KCG + +A  +F +M +K+++AWN +ISG+ Q+G   +A  LF  
Sbjct: 316 CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-FES--DDYIVNSLIDAYGK 345
           M    +  D  T   VL +         C     +++  A FES   DY V    D Y  
Sbjct: 376 MIDNKIRPDWITFVAVLLA---------CNHAGLVNIGMAYFESMVRDYKVEPQPDHY-- 424

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
                                 T M+    + G  EEALKL   M  R   P + V  +L
Sbjct: 425 ----------------------TCMVDLLGRAGKLEEALKLIRSMPFR---PHAAVFGTL 459

Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN-SLVNMYAKCGSIDDADRAFSEIPDRG 464
           L AC      E  +     +++    S   AG   L N+YA     +D  R    + +  
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLN--SQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517

Query: 465 IV 466
           +V
Sbjct: 518 VV 519



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 10/186 (5%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L  C+    L LG Q+H IV  +   +D     SL+ MY KCG   D+ +LF+ + ++ V
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK---- 117
           V+WN++ S Y      ++A+C F+EM+ + IRP+  +  +++ AC  +G   +G      
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 410

Query: 118 -IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
            +  Y ++   D        +VD+  + G LE+A+ + + +   P    +  ++  C +H
Sbjct: 411 MVRDYKVEPQPD----HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466

Query: 176 EHNDWA 181
           ++ + A
Sbjct: 467 KNVELA 472


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/623 (37%), Positives = 351/623 (56%), Gaps = 69/623 (11%)

Query: 218 QLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +LH  ++  E ++ DP + + L+  Y+  G    AR IF    EKN++ +N++I  ++ N
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
              +EA S+F  M       D  T   VLK+ +    + V  QVH   VK   +++ +I 
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 337 NSLIDAYGKC-------------------------------GHVEDAVKIFKESSAVDL- 364
           N+L+  YGKC                               G  +DA++I KE  +++L 
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235

Query: 365 -----------VACTS-------------------------MITAYAQFGLGEEALKLYL 388
                      V C +                         MI  Y    +  EA+ L+L
Sbjct: 236 HDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M++  + PD+   +SLL AC +LSA   G+++H +I K     +    N+L++MYAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +++A   F ++  R +VSW++M+    + G+G +A+ +F +ML+ G  P+ I  VSVL 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H GL+ + +H+F  M +++GI P  EH+ACM+D+ GRAG+ +EA   +  MP + N 
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            VWGALL A R++  +++G  AA++LF + P++S  +VLLSNIYA AGMW +V  VR  M
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K   +KK PG+S +E+  +V+TF  GD+ H ++K IY +LD +   + + GY+P  E+ L
Sbjct: 536 KKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESAL 595

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           HDVE  +KE  L  HSEKLA+ F ++ T  G  IR+ KNLR+C DCH + + ISKIVSR 
Sbjct: 596 HDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRN 655

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD NRFHHF NG CSCG YW
Sbjct: 656 IIVRDCNRFHHFSNGICSCGDYW 678



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 238/485 (49%), Gaps = 40/485 (8%)

Query: 3   KACTSKKDLFLGLQV-----HGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
           +AC    D + G++        IV+      D  +A  L+  Y+  G    +R +FD   
Sbjct: 39  EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSL 98

Query: 58  ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
           E++VV +N +   YV+ +   EA+  F+ M+     P+ ++   ++ AC+G  +  +G +
Sbjct: 99  EKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H   +K+G D+++F  NALV MY K G L +A  V   + + D+VSWN+++AG      
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            D AL++ ++M S  +N +  T  S                             P+V   
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASL---------------------------SPVV--- 248

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
               Y    ++     +F  M +KNLI+WN++I+ ++ N    EA SLF  M   G+  D
Sbjct: 249 ---CYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPD 305

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
             T++++L +     A+ + +++H    K   + +  + N+L+D Y KCG +E+A  +F 
Sbjct: 306 AVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFD 365

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
           +    D+V+ TSM++AY + G G +A+ L+ +M D   NPDS    S+L+AC++    +Q
Sbjct: 366 KMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQ 425

Query: 418 GKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGL 475
           G+     +  ++G +        +V+++ + G +++A     ++P +     W A++   
Sbjct: 426 GRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 485

Query: 476 AQHGR 480
             H +
Sbjct: 486 RVHSK 490



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 40/362 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+   +L +GLQVH  +V  G D++ F+ N+LV MY KCG   ++R++ D +P R 
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRD 202

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ + Y      ++A+   KEM                       DSL       
Sbjct: 203 VVSWNSMVAGYAQSGQFDDALEICKEM-----------------------DSL------- 232

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
               L +D+   ++ + V  Y  + N++    +F+ +   +++SWN +IA  V +   + 
Sbjct: 233 ---NLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF QM+   + P+  T  S L AC  +    LGR+LH  + K  ++ + ++   L+D
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLD 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++EAR +F  M  +++++W  ++S + ++G   +A +LF  M   G   D   
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409

Query: 301 LSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             +VL + +     G+  Q       ++ +            ++D +G+ G VE+A    
Sbjct: 410 FVSVLSACSH---TGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFI 466

Query: 357 KE 358
           K+
Sbjct: 467 KQ 468



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 6/186 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     LFLG ++H  +       +  + N+L+ MYAKCG   ++R +FD +  R 
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRD 371

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S Y       +AV  F +M+ SG  P+  +  S+++AC+ +G  LL +  H 
Sbjct: 372 VVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG--LLDQGRHY 429

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           + +   + G    +     +VD++ + G +E+A +  K +   P+   W A+++ C +H 
Sbjct: 430 FRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHS 489

Query: 177 HNDWAL 182
             D  L
Sbjct: 490 KMDIGL 495


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/612 (35%), Positives = 364/612 (59%), Gaps = 10/612 (1%)

Query: 163 VSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
            SWN  +           ++ L++ M  S  +P+ F++   LK+CA + L   G+QLHC 
Sbjct: 16  TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75

Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL--IAWNIVISGHLQNGGDM 280
           +I+   +++P V   L+ MY KCG +++AR +F   P  +   + +N +ISG+  N    
Sbjct: 76  VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135

Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLI 340
           +AA +F  M   GV  D  T+  ++      + + + + +H   VK    S+  ++NS I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195

Query: 341 DAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
             Y KCG VE   ++F E     L+   ++I+ Y+Q GL  + L+L+ +M+   + PD F
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255

Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
              S+L++CA+L A + G++V   +   GF  + F  N+L++MYA+CG++  A   F  +
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
           P + +VSW+AMIG    HG G+  L +F  M++ G+ P+    V VL AC+H+GL  +  
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375

Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
             F +M++++ ++P  EHY+C++D+LGRAG+  EAME +D+MP + + +VWGALLGA +I
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435

Query: 581 YKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMS 640
           +KNV++ + A   +   EP     +VL+SNIY+ +   + + ++R  M++   +K+PG S
Sbjct: 436 HKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 495

Query: 641 WIEVKDKVYTFTVGDRSHARSKEIYAKLDEV-SDLLNKAGYVPMVETDLHDVEESEKEQL 699
           ++E K KV+ F  GDRSH +++E++  LDE+ + ++  AG +     +  +V  + +E  
Sbjct: 496 YVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGE--EVSSTTRE-- 551

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
              HSE+LA+AFG++ + PG  I V KNLR+C DCH   + +SKIV R  +VRD +RFH+
Sbjct: 552 ---HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHY 608

Query: 760 FRNGSCSCGGYW 771
           F++G CSC  YW
Sbjct: 609 FKDGVCSCKDYW 620



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 214/437 (48%), Gaps = 6/437 (1%)

Query: 62  VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
            SWN       +     E++  ++ M+ SG  P+ FS   ++ +CA     + G+++H +
Sbjct: 16  TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75

Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDI--VSWNAVIAGCVLHEHND 179
            I+ G +++ F   AL+ MY K G +EDA  VF++  H     V +NA+I+G   +    
Sbjct: 76  VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135

Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
            A  +F++MK + ++ +  T    +  C   E   LGR LH   +K    S+  V    +
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
            MY KCGS++  R +F  MP K LI WN VISG+ QNG   +   LF  M   GV  D  
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
           TL +VL S A   A  + ++V  L     F  + ++ N+LI  Y +CG++  A  +F   
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315

Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
               LV+ T+MI  Y   G+GE  L L+ +M  R I PD  V   +L+AC++    ++G 
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375

Query: 420 QVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP--DRGIVSWSAMIGGLA 476
           ++   + + +         + LV++  + G +D+A      +P    G V W A++G   
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAV-WGALLGACK 434

Query: 477 QHGRGKEALQMFGQMLE 493
            H     A   F +++E
Sbjct: 435 IHKNVDMAELAFAKVIE 451



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 193/370 (52%), Gaps = 12/370 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK+C S      G Q+H  V+  G +++ FV  +L+ MY KCG   D+R++F+  P  S
Sbjct: 56  ILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSS 115

Query: 61  V--VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
              V +N+L S Y     + +A   F+ M  +G+  +  ++  ++  C       LGR +
Sbjct: 116 QLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSL 175

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           HG  +K G  S++   N+ + MY K G++E    +F ++    +++WNAVI+G   +  N
Sbjct: 176 HGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISG---YSQN 232

Query: 179 DWA---LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
             A   L+LF+QMKSS + P+ FT  S L +CA +  K++G+++   +       +  + 
Sbjct: 233 GLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLS 292

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG 295
             L+ MYA+CG++ +AR +F +MP K+L++W  +I  +  +G      +LF  M + G+ 
Sbjct: 293 NALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIR 352

Query: 296 FDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
            D      VL   S +     G+ +   A+  +   E      + L+D  G+ G +++A+
Sbjct: 353 PDGAVFVMVLSACSHSGLTDKGL-ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAM 411

Query: 354 KIFKESSAVD 363
           + F +S  V+
Sbjct: 412 E-FIDSMPVE 420



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 2/272 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           ++  CT  + L+LG  +HG  V  G  S+  V NS + MY KCG+    RRLFD +P + 
Sbjct: 159 LVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKG 218

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +++WN++ S Y       + +  F++M  SG+ P+ F+L S++++CA  G   +G+++  
Sbjct: 219 LITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGE 278

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                G+  ++F +NAL+ MYA+ GNL  A AVF  +    +VSW A+I    +H   + 
Sbjct: 279 LVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGET 338

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK-MEIKSDPIVGVGLV 239
            L LF  M    I P+   +   L AC+   L + G +L  ++ +  +++  P     LV
Sbjct: 339 GLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 398

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
           D+  + G +DEA      MP E +   W  ++
Sbjct: 399 DLLGRAGRLDEAMEFIDSMPVEPDGAVWGALL 430



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 10/194 (5%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C       +G +V  +V   GF  + F++N+L+ MYA+CGN   +R +FD +P +S
Sbjct: 260 VLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKS 319

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-- 118
           +VSW ++  CY      E  +  F +M+  GIRP+      +++AC+ SG +  G ++  
Sbjct: 320 LVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFR 379

Query: 119 ---HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
                Y ++ G +      + LVD+  + G L++A+     +   PD   W A++  C +
Sbjct: 380 AMKREYKLEPGPE----HYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435

Query: 175 HEHNDWALKLFQQM 188
           H++ D A   F ++
Sbjct: 436 HKNVDMAELAFAKV 449



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 6/226 (2%)

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           V  F  +SAV   +    +   A   L  E++ LY  M     +PD+F    +L +CA+L
Sbjct: 4   VPSFVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASL 63

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI--VSWSA 470
           S    G+Q+H H+I+ G  ++ F   +L++MY KCG ++DA + F E P      V ++A
Sbjct: 64  SLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNA 123

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKK 529
           +I G   + +  +A  MF +M E GV  + +T++ ++  C     +   +  H E +  K
Sbjct: 124 LISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECV--K 181

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
            G           I +  + G  +    L D MP +   + W A++
Sbjct: 182 GGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLIT-WNAVI 226


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/623 (37%), Positives = 351/623 (56%), Gaps = 69/623 (11%)

Query: 218 QLHCSLIKME-IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           +LH  ++  E ++ DP + + L+  Y+  G    AR IF    EKN++ +N++I  ++ N
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
              +EA S+F  M       D  T   VLK+ +    + V  QVH   VK   +++ +I 
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 337 NSLIDAYGKC-------------------------------GHVEDAVKIFKESSAVDL- 364
           N+L+  YGKC                               G  +DA++I KE  +++L 
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235

Query: 365 -----------VACTS-------------------------MITAYAQFGLGEEALKLYL 388
                      V C +                         MI  Y    +  EA+ L+L
Sbjct: 236 HDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
           +M++  + PD+   +SLL AC +LSA   G+++H +I K     +    N+L++MYAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355

Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
            +++A   F ++  R +VSW++M+    + G+G +A+ +F +ML+ G  P+ I  VSVL 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
           AC+H GL+ + +H+F  M +++GI P  EH+ACM+D+ GRAG+ +EA   +  MP + N 
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
            VWGALL A R++  +++G  AA++LF + P++S  +VLLSNIYA AGMW +V  VR  M
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           K   +KK PG+S +E+  +V+TF  GD+ H ++K IY +LD +   + + GY+P  E+ L
Sbjct: 536 KKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESAL 595

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           HDVE  +KE  L  HSEKLA+ F ++ T  G  IR+ KNLR+C DCH + + ISKIVSR 
Sbjct: 596 HDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRN 655

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           IIVRD NRFHHF NG CSCG YW
Sbjct: 656 IIVRDCNRFHHFSNGICSCGDYW 678



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 40/362 (11%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC+   +L +GLQVH  +V  G D++ F+ N+LV MY KCG   ++R++ D +P R 
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRD 202

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWNS+ + Y      ++A+   KEM                       DSL       
Sbjct: 203 VVSWNSMVAGYAQSGQFDDALEICKEM-----------------------DSL------- 232

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
               L +D+   ++ + V  Y  + N++    +F+ +   +++SWN +IA  V +   + 
Sbjct: 233 ---NLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+ LF QM+   + P+  T  S L AC  +    LGR+LH  + K  ++ + ++   L+D
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLD 349

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MYAKCG ++EAR +F  M  +++++W  ++S + ++G   +A +LF  M   G   D   
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409

Query: 301 LSTVLKSVASFQAIGVCKQ----VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
             +VL + +     G+  Q       ++ +            ++D +G+ G VE+A    
Sbjct: 410 FVSVLSACSH---TGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFI 466

Query: 357 KE 358
           K+
Sbjct: 467 KQ 468



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 6/186 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L AC     LFLG ++H  +       +  + N+L+ MYAKCG   ++R +FD +  R 
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRD 371

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSW S+ S Y       +AV  F +M+ SG  P+  +  S+++AC+ +G  LL +  H 
Sbjct: 372 VVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG--LLDQGRHY 429

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           + +   + G    +     +VD++ + G +E+A +  K +   P+   W A+++ C +H 
Sbjct: 430 FRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHS 489

Query: 177 HNDWAL 182
             D  L
Sbjct: 490 KMDIGL 495


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/743 (34%), Positives = 408/743 (54%), Gaps = 63/743 (8%)

Query: 34  NSLVVMYAKCGNFIDSRRLFD--AIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
            S +  Y + G+  ++R++FD   +P+R++ SWN++ S Y       +A+  F +M    
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP--- 79

Query: 92  IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
            + N  S + MI+    +G     RK+      +  + ++ S  ++V  Y + G +E+A 
Sbjct: 80  -QRNTVSFNGMISGYVKNGMVADARKV----FDVMPERNVVSWTSMVRGYVQEGMVEEAE 134

Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
            +F ++   ++VSW  +I G +     D A KLF  +   ++       T+ +     + 
Sbjct: 135 KLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDV----VVVTNMIGGYCQVG 190

Query: 212 LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVIS 271
             +  R+L     +M+++ +      +V  YAK G +D AR +F +MPE+N ++W  ++ 
Sbjct: 191 RLDEAREL---FDEMKVR-NVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLM 246

Query: 272 GHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFES 331
           G+ Q+G   EA  LF                                   A+ VK     
Sbjct: 247 GYTQSGRMKEAFELF----------------------------------EAMPVK----- 267

Query: 332 DDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
             +IV  N +I  +G  G +  A  +F+     D     +MI  + + GL  EAL L+  
Sbjct: 268 --WIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFAR 325

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           MQ   +  +     S+L+ CA+L++ + G+QVH  +++  F  D +  + L+ MY KCG 
Sbjct: 326 MQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGD 385

Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
           +  A   F+    + +V W++MI G +QHG G+EAL +F  M   GV P+ +T + VL A
Sbjct: 386 LVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSA 445

Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
           C+++G V E    FE+M+  + ++P  EHYACM+D+LGRAG+  EAMELV+ MP + +A 
Sbjct: 446 CSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAI 505

Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
           VWGALLGA R +  +++ + A E L  +EP+ +  +VLLS++YA+ G W +V  +R+ + 
Sbjct: 506 VWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI- 564

Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
           + ++ K PG SWIEV+ KV+ FT GD +SH     I   L+++S  L +AGY P     L
Sbjct: 565 NRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVL 624

Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
           HDV+E EK   L +HSE+LAVA+GL+  P G  IRV KNLR+C DCH++ + I+K+  RE
Sbjct: 625 HDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 684

Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
           II+RD NRFHHF++GSCSC  +W
Sbjct: 685 IILRDANRFHHFKDGSCSCKDFW 707



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 193/442 (43%), Gaps = 48/442 (10%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + D  V  +++  Y + G   ++R LFD +  R+V +W ++ S Y     ++ A   F+ 
Sbjct: 173 EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEV 232

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA-NALVDMYAKVG 145
           M       NE S ++M+     S     GR    + +          A N ++  +   G
Sbjct: 233 MP----ERNEVSWTAMLMGYTQS-----GRMKEAFELFEAMPVKWIVACNEMILQFGLAG 283

Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
            +  A  +F+ ++  D  +WNA+I        +  AL LF +M+   +  N  +  S L 
Sbjct: 284 EMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLS 343

Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA 265
            CA +   + GRQ+H  L++ E   D  V   L+ MY KCG +  A+ IF+    K+++ 
Sbjct: 344 VCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVM 403

Query: 266 WNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           WN +I+G+ Q+G   EA ++F  M   GV  D+ T   VL + +           ++  V
Sbjct: 404 WNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACS-----------YSGKV 452

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           K  FE    I  ++     KC         ++    ++  AC  M+    + G  +EA++
Sbjct: 453 KEGFE----IFEAM-----KC--------TYQVEPGIEHYAC--MVDLLGRAGRVDEAME 493

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNM 443
           L  +M    + PD+ V  +LL AC N    +  +   V + K   +    AG    L +M
Sbjct: 494 LVEKMP---MEPDAIVWGALLGACRNHMKLDLAE---VAVEKLAKLEPKNAGPYVLLSHM 547

Query: 444 YAKCGSIDDADRAFSEIPDRGI 465
           YA  G   D +    +I  R I
Sbjct: 548 YATKGRWRDVEVLRKKINRRVI 569



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 21/252 (8%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C S   L  G QVH  +V + FD D +VA+ L+ MY KCG+ + ++ +F+    + 
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKD 400

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH- 119
           VV WNS+ + Y      EEA+  F +M  SG++P+E +   +++AC+ SG    G +I  
Sbjct: 401 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE 460

Query: 120 ----GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
                Y ++ G +        +VD+  + G +++A+ + + +   PD + W A++  C  
Sbjct: 461 AMKCTYQVEPGIE----HYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRN 516

Query: 175 HEHNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG------MELKELGRQL----HCSL 223
           H   D A    +++   E  N   +   S + A  G      +  K++ R++     CS 
Sbjct: 517 HMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGCSW 576

Query: 224 IKMEIKSDPIVG 235
           I++E K     G
Sbjct: 577 IEVEKKVHMFTG 588



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 69/291 (23%)

Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD--LVACTSMITAY 374
           C+ V A S+ +          S I  YG+ G + +A K+F  +      + +  +M++AY
Sbjct: 11  CRMVQARSLCSN--------TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAY 62

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
            +     +AL L+ +M  R                                       +T
Sbjct: 63  FESHKPRDALLLFDQMPQR---------------------------------------NT 83

Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
            + N +++ Y K G + DA + F  +P+R +VSW++M+ G  Q G  +EA ++F +M   
Sbjct: 84  VSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRR 143

Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG---RAGK 551
            V+   + +          GL+ E++   +  +K F + P ++    + +++G   + G+
Sbjct: 144 NVVSWTVMI---------GGLLKESR--IDDAKKLFDMIP-EKDVVVVTNMIGGYCQVGR 191

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
             EA EL D M  + N   W  ++        V+V    A  LF + PE++
Sbjct: 192 LDEARELFDEMKVR-NVFTWTTMVSGYAKNGRVDV----ARKLFEVMPERN 237


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/684 (35%), Positives = 392/684 (57%), Gaps = 4/684 (0%)

Query: 1    VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
            VL A     +L LGL VH   +  G  S+ +V +SLV MY+KC     + ++F+A+ E++
Sbjct: 333  VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392

Query: 61   VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             V WN++   Y H     + +  F +M  SG   ++F+ +S+++ CA S D  +G + H 
Sbjct: 393  DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452

Query: 121  YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
              IK     ++F  NALVDMYAK G LEDA  +F+ +   D V+WN +I   V  E+   
Sbjct: 453  IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512

Query: 181  ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            A  LF++M    I  +     S LKAC  +     G+Q+HC  +K  +  D   G  L+D
Sbjct: 513  AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572

Query: 241  MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
            MY+KCG + +AR +F  +PE ++++ N +I+G+ QN  + EA  LF  M   GV   + T
Sbjct: 573  MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEIT 631

Query: 301  LSTVLKSVASFQAIGVCKQVHALSVKTAFESD-DYIVNSLIDAYGKCGHVEDAVKIFKE- 358
             +T++++    +++ +  Q H    K  F S+ +Y+  SL+  Y     + +A  +F E 
Sbjct: 632  FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691

Query: 359  SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
            SS   +V  T M++ ++Q G  EEALK Y EM+   + PD     ++L  C+ LS+  +G
Sbjct: 692  SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751

Query: 419  KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQ 477
            + +H  I       D    N+L++MYAKCG +  + + F E+  R  +VSW+++I G A+
Sbjct: 752  RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811

Query: 478  HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
            +G  ++AL++F  M +  ++P+ IT + VL AC+HAG V++ +  FE M  ++GI+   +
Sbjct: 812  NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871

Query: 538  HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
            H ACM+D+LGR G  QEA + ++    + +A +W +LLGA RI+ +   G+ +AE L  +
Sbjct: 872  HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931

Query: 598  EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            EP+ SS +VLLSNIYAS G W+    +R+ M+D  +KK PG SWI+V+ + + F  GD+S
Sbjct: 932  EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991

Query: 658  HARSKEIYAKLDEVSDLLNKAGYV 681
            H+   +I   L+++ DL+     V
Sbjct: 992  HSEIGKIEMFLEDLYDLMKDDAVV 1015



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 298/578 (51%), Gaps = 27/578 (4%)

Query: 14  GLQVHGIVVFT-----GFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLF 68
           GL    ++VF      G   D     +++  Y + G   D+R LF  +    VV+WN + 
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMI 299

Query: 69  SCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           S +        A+ +F  M  S ++    +L S+++A     +  LG  +H  +IKLG  
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359

Query: 129 SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
           S+++  ++LV MY+K   +E A  VF+ +E  + V WNA+I G   +  +   ++LF  M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
           KSS  N + FT+TS L  CA     E+G Q H  +IK ++  +  VG  LVDMYAKCG++
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           ++AR IF  M +++ + WN +I  ++Q+  + EA  LF  M   G+  D   L++ LK+ 
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
                +   KQVH LSVK   + D +  +SLID Y KCG ++DA K+F       +V+  
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
           ++I  Y+Q  L EEA+ L+ EM  R +NP     ++++ AC    +   G Q H  I K 
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658

Query: 429 GFMSD-TFAGNSLVNMYAKCGSIDDADRAFSEIPD-RGIVSWSAMIGGLAQHGRGKEALQ 486
           GF S+  + G SL+ MY     + +A   FSE+   + IV W+ M+ G +Q+G  +EAL+
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718

Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA------ 540
            + +M  DGVLP+  T V+VL  C+    + E +           I  +  H A      
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR----------AIHSLIFHLAHDLDEL 768

Query: 541 ---CMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               +ID+  + G  + + ++ D M  ++N   W +L+
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/511 (31%), Positives = 258/511 (50%), Gaps = 36/511 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C  + ++  G Q+H  ++  G + + +   +LV MYAKC    D+RR+F+ I + +
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V W  LFS YV     EEAV  F+ M   G RP+  +  ++IN                
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--------------- 270

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               Y ++G L+DA  +F ++  PD+V+WN +I+G         
Sbjct: 271 --------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A++ F  M+ S +     T  S L A   +   +LG  +H   IK+ + S+  VG  LV 
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KC  M+ A  +F  + EKN + WN +I G+  NG   +   LF  M   G   D  T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            +++L + A+   + +  Q H++ +K     + ++ N+L+D Y KCG +EDA +IF+   
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   ++I +Y Q     EA  L+  M    I  D    +S L AC ++    QGKQ
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           VH   +K G   D   G+SL++MY+KCG I DA + FS +P+  +VS +A+I G +Q+  
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL 610

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
            +EA+ +F +ML  GV P+ IT  +++ AC+
Sbjct: 611 -EEAVVLFQEMLTRGVNPSEITFATIVEACH 640



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 274/553 (49%), Gaps = 37/553 (6%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L +G  VH   +  G DS+  + N++V +YAKC     + + FD + E+ V +WNS+ S 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y       + +  F  +  + I PN+F+ S +++ CA   +   GR+IH   IK+G + +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
            +   ALVDMYAK   + DA  VF+ I  P+ V W  + +G V     + A+ +F++M+ 
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
               P+   +                                   V +++ Y + G + +
Sbjct: 255 EGHRPDHLAF-----------------------------------VTVINTYIRLGKLKD 279

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           AR++F  M   +++AWN++ISGH + G +  A   F  M +  V   ++TL +VL ++  
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              + +   VHA ++K    S+ Y+ +SL+  Y KC  +E A K+F+     + V   +M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  YA  G   + ++L+++M+    N D F  +SLL+ CA     E G Q H  IIK   
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
             + F GN+LV+MYAKCG+++DA + F  + DR  V+W+ +IG   Q     EA  +F +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           M   G++ +   L S L AC H   + + K     +  K G+       + +ID+  + G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGK-QVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578

Query: 551 KFQEAMELVDTMP 563
             ++A ++  ++P
Sbjct: 579 IIKDARKVFSSLP 591



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 225/466 (48%), Gaps = 42/466 (9%)

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           +G+ +H  S+ LG DS+    NA+VD+YAK   +  A   F D    D+ +WN++++   
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYS 136

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
                   L+ F  +  ++I PN FT++  L  CA     E GRQ+HCS+IKM ++ +  
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196

Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
            G  LVDMYAKC  + +AR +F  + + N + W  + SG+++ G   EA  +F  M  EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256

Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
              D     TV                                   I+ Y + G ++DA 
Sbjct: 257 HRPDHLAFVTV-----------------------------------INTYIRLGKLKDAR 281

Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
            +F E S+ D+VA   MI+ + + G    A++ +  M+   +        S+L+A   ++
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341

Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
             + G  VH   IK G  S+ + G+SLV+MY+KC  ++ A + F  + ++  V W+AMI 
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401

Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL--CACNHAGLVAEAKHHFESMEKKFG 531
           G A +G   + +++F  M   G   +  T  S+L  CA +H  L   ++ H   ++KK  
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH-DLEMGSQFHSIIIKKKLA 460

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
                 +   ++D+  + G  ++A ++ + M  + N + W  ++G+
Sbjct: 461 KNLFVGN--ALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 9/278 (3%)

Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
           A+ + K VH+ S+    +S+  + N+++D Y KC  V  A K F +    D+ A  SM++
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133

Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
            Y+  G   + L+ ++ + + +I P+ F  S +L+ CA  +  E G+Q+H  +IK G   
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           +++ G +LV+MYAKC  I DA R F  I D   V W+ +  G  + G  +EA+ +F +M 
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
           ++G  P+H+  V+V+      G + +A+  F  M       P    +  MI   G+ G  
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308

Query: 553 QEAMELVDTM---PFQANASVWGALLGAARIYKNVEVG 587
             A+E    M     ++  S  G++L A  I  N+++G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/658 (36%), Positives = 378/658 (57%), Gaps = 4/658 (0%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
           + +H + +K G     F  + L+D Y K   + +A  +F ++ +  IV+WN++I+  V  
Sbjct: 21  KSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK-SDPIV 234
                A++L+  M    + P+ +T+++  KA + M +   G++ H   + +  + SD  V
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
             G+VDMYAK G M +AR +F  + +K+++ +  +I G+ Q G D EA  +F  M    +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             ++ TL++VL S  +   +   K +H L VK+  ES      SL+  Y KC  VED++K
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIK 259

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           +F   +    V  TS I    Q G  E AL ++ EM    I+P+ F  SS+L+AC++L+ 
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAM 319

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
            E G+Q+H   +K G   + +   +L+++Y KCG+++ A   F  + +  +VS + MI  
Sbjct: 320 LEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYA 379

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            AQ+G G EAL++F +M + G  PN +T +S+L ACN+AGLV E    F  +     I+ 
Sbjct: 380 YAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIEL 439

Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
            ++HY CMID+LGRA +F+EA  L++      +   W  LL A +I+  VE+ +   + +
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498

Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
               P    TH+LL+NIYASAG WDNV +++   +D +LKK P MSW+++  +V+TF  G
Sbjct: 499 LDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAG 558

Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
           D SH R+ EI   L E+ + +   GY P  +  L D+EE +K   LY+HSEKLA+AF L 
Sbjct: 559 DLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALW 618

Query: 715 ATPPGAT-IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
            T    T IR+ KNLR+C DCH+  +F+S +  R+II RD  RFHHF+ G CSC  YW
Sbjct: 619 KTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 269/523 (51%), Gaps = 13/523 (2%)

Query: 6   TSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWN 65
           T+KK L     +H  ++ +G     F  + L+  Y KC    ++R+LFD +P R +V+WN
Sbjct: 12  TNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWN 70

Query: 66  SLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
           S+ S +V     +EA+  +  M+  G+ P+ ++ S++  A +  G S  G+K HG ++ L
Sbjct: 71  SMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVL 130

Query: 126 GYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           G++ SD F A  +VDMYAK G ++DA  VF  +   D+V + A+I G      +  AL++
Sbjct: 131 GFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEV 190

Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           F+ M  S I PN +T  S L +C  +     G+ +H  ++K  ++S       L+ MY+K
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSK 250

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           C  ++++  +F+ +   + + W   I G +QNG +  A S+F  M R  +  +  T S++
Sbjct: 251 CNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSI 310

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           L + +S   +   +Q+HA++VK   + + Y+  +LI  YGKCG+VE A  +F+  + +D+
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDV 370

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
           V+  +MI AYAQ G G EAL+L+  M+     P+     S+L AC N    E+G Q+   
Sbjct: 371 VSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSL 430

Query: 425 IIK---FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
           I          D +    ++++  +    ++A     E  +  ++ W  ++     HG  
Sbjct: 431 IRNNHSIELTRDHYT--CMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEV 488

Query: 482 KEALQMFGQMLE----DGVLPNHITLVSVLCACNHAGLVAEAK 520
           + A +   +ML+    DG    HI L ++  +      V E K
Sbjct: 489 EMAEKFMKKMLDQAPRDG--GTHILLTNIYASAGKWDNVIEMK 529



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 152/290 (52%), Gaps = 8/290 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL +C +  DL  G  +HG+VV +G +S      SL+ MY+KC    DS ++F+++   S
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYAS 268

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            V+W S     V     E A+  F+EM+   I PN F+ SS+++AC+       G +IH 
Sbjct: 269 HVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHA 328

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++KLG D + +   AL+ +Y K GN+E A +VF+ +   D+VS N +I     +     
Sbjct: 329 VTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHE 388

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIK----MEIKSDPIVGV 236
           AL+LF++MK     PN+ T+ S L AC    L E G Q+  SLI+    +E+  D     
Sbjct: 389 ALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIF-SLIRNNHSIELTRDHY--T 445

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
            ++D+  +    +EA M+       ++I W  +++   +  G++E A  F
Sbjct: 446 CMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA-CKIHGEVEMAEKF 494



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
           +SL+    N  +    K +H HI+K G +  +F G+ L++ Y KC  I +A + F E+P+
Sbjct: 5   TSLIAQFTNKKSLTTLKSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLFDEMPN 63

Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
           R IV+W++MI      G+ KEA++++  ML +GVLP+  T  ++  A +  G+  E +  
Sbjct: 64  RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123

Query: 523 FESMEKKFGIQPMQEHYAC-MIDILGRAGKFQEAMELVD 560
              +    G +      A  ++D+  + GK ++A  + D
Sbjct: 124 -HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFD 161


>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/493 (43%), Positives = 326/493 (66%), Gaps = 11/493 (2%)

Query: 289 MYREGVGFDQTTLSTVLKSVASFQAI------GVCKQVHALSVKTAFESDDYIVNSLIDA 342
           ++R  +  D  ++     ++ +F A       GV   +HAL  K  FE +  +VN+++D+
Sbjct: 183 LFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDS 242

Query: 343 YGKCGH--VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD--REINPD 398
           Y K G   +E A K+F ++   D+V+  SMI  YAQ G+  EA+ LY +M +    I  +
Sbjct: 243 YAKGGSRDLEVARKVF-DTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCN 301

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           +   S++L ACA+  A + GK++H  +++ G   + + G S+V+MY+KCG ++ A RAF 
Sbjct: 302 AVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFR 361

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           +I ++ I+SWSAMI G   HGRG+EAL++F +M   G+ PN+IT +SVL AC+HAGL+ E
Sbjct: 362 KIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDE 421

Query: 519 AKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
            ++ + +M+++FGI+   EHY CM+D+LGRAG   EA  L+  M  + +A++WGALL A 
Sbjct: 422 GRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSAC 481

Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPG 638
           RI+KNVE+ + + + LF ++   S  +VLLSNIYA A MW +V ++R  +K  +++K PG
Sbjct: 482 RIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPG 541

Query: 639 MSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQ 698
            S  E+K K+Y F VGD+SH +  EIY+ L+++ + + +AGYVP   + LHD++E EKE 
Sbjct: 542 YSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKES 601

Query: 699 LLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFH 758
            L  HSEKLAVAF L+ + P + I + KNLR+C DCHT+ +FI+KI  REII+RD+ RFH
Sbjct: 602 ALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFH 661

Query: 759 HFRNGSCSCGGYW 771
           HF++G CSC  YW
Sbjct: 662 HFKDGLCSCRDYW 674



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 150/272 (55%), Gaps = 13/272 (4%)

Query: 10  DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG--NFIDSRRLFDAIPERSVVSWNSL 67
           D  +   +H ++   GF+ +  V N+++  YAK G  +   +R++FD + ER VVSWNS+
Sbjct: 213 DRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSM 271

Query: 68  FSCYVHCDFLEEAVCFFKEM--VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKL 125
            + Y       EA+  + +M  V  GI+ N  +LS+++ ACA +G    G++IH   +++
Sbjct: 272 IALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRM 331

Query: 126 GYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLF 185
           G + +++   ++VDMY+K G +E A   F+ I+  +I+SW+A+I G  +H     AL++F
Sbjct: 332 GLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIF 391

Query: 186 QQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG----LVDM 241
            +MK S + PN  T+ S L AC+   L + GR  + ++ K E   +   GV     +VD+
Sbjct: 392 TEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAM-KQEFGIE--AGVEHYGCMVDL 448

Query: 242 YAKCGSMDEARMIFHLMPEKNLIA-WNIVISG 272
             + G +DEA  +   M  K   A W  ++S 
Sbjct: 449 LGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 480



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 201/452 (44%), Gaps = 66/452 (14%)

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRP--NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYD 128
           YV  + +  ++  F+ M+ S      +E +     +A A   D  +   +H    K+G++
Sbjct: 171 YVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 230

Query: 129 SDMFSANALVDMYAKVG--NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQ 186
            +    N ++D YAK G  +LE A  VF  +E  D+VSWN++IA    +  +  A+ L+ 
Sbjct: 231 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSAEAIGLYS 289

Query: 187 QMKS--SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAK 244
           +M +    I  N    ++ L ACA     + G+++H  +++M ++ +  VG  +VDMY+K
Sbjct: 290 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 349

Query: 245 CGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTV 304
           CG ++ A   F  + EKN+++W+ +I+G+  +G   EA  +F  M R G+  +  T  +V
Sbjct: 350 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 409

Query: 305 LKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDL 364
           L           C     L      +   Y  N++   +G    +E  V+ +        
Sbjct: 410 L---------AACSHAGLL------DEGRYWYNAMKQEFG----IEAGVEHY-------- 442

Query: 365 VACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVH 424
             C  M+    + G  +EA  L  EM+   + PD+ +  +LL+AC         K V + 
Sbjct: 443 -GC--MVDLLGRAGCLDEAYSLIKEMK---VKPDAAIWGALLSAC------RIHKNVELA 490

Query: 425 IIKFGFMSDTFAGNS-----LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
            +    + +  A NS     L N+YA+     D +R    +  R I           +  
Sbjct: 491 EMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI-----------EKP 539

Query: 480 RGKEALQMFGQM----LEDGVLPNHITLVSVL 507
            G  + ++ G++    + D   P HI + S L
Sbjct: 540 PGYSSFELKGKIYLFYVGDKSHPQHIEIYSYL 571



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 103/185 (55%), Gaps = 6/185 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     +  G ++H  VV  G + + +V  S+V MY+KCG    + R F  I E++
Sbjct: 308 VLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN 367

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           ++SW+++ + Y      +EA+  F EM  SG+RPN  +  S++ AC+ +G  LL    + 
Sbjct: 368 ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG--LLDEGRYW 425

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
           Y+    + G ++ +     +VD+  + G L++A ++ K+++  PD   W A+++ C +H+
Sbjct: 426 YNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHK 485

Query: 177 HNDWA 181
           + + A
Sbjct: 486 NVELA 490


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/697 (34%), Positives = 389/697 (55%), Gaps = 33/697 (4%)

Query: 102 MINACAGSGDSLLGRKIHGYSIK--LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
           + +ACA       G  +H Y +       +D+F  N L++MY K G+L+ A  +F  +  
Sbjct: 84  LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143

Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
            + VSW  +++G            LF  M +    PN F + S L AC   ++K  G Q+
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGMLAC-FRPNEFAFASVLCACEEQDVK-YGLQV 201

Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCG---------SMDEARMIFHLMPEKNLIAWNIVI 270
           H + +KM +     V   L+ MY+KC          + D+A M+F  M  +NLI+WN +I
Sbjct: 202 HAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMI 261

Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS----------VASFQAIGVCKQV 320
           SG    G   +A  LF  MY  G+ F+ TTL  VL S          + +   +  C Q+
Sbjct: 262 SGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQL 321

Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCG-HVEDAVKIFKESSAV-DLVACTSMITAYAQFG 378
           H L+VK+   S+  +V +L+ +Y   G H+ D  K+F ++S   D+V+ T++I+ +A+  
Sbjct: 322 HCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERD 381

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             E+A  L+ ++       D    S  L ACA     +   +VH  ++K GF +DT   N
Sbjct: 382 -PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSN 440

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +L++ Y + GS+  +++ F+E+    +VSW++M+   A HGR K+AL +F QM    V P
Sbjct: 441 ALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHP 497

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           +  T V++L AC+HAGLV E    F SM +  GI P  +HY+CM+D+ GRAGK  EA EL
Sbjct: 498 DSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEEL 557

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           +  MP + ++ +W +LLG+ R +   ++ + AA+    ++P+ S  ++ +SNIY+S G +
Sbjct: 558 IRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSF 617

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
                +R+ M+D+K++K PG+SW+EV  +V+ FT G + H + + I ++L+ +   L + 
Sbjct: 618 IEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEM 677

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL----IATPPGATIRVKKNLRICVDC 734
           GY P + + LHD+E    E  L+HHSEK+A+ F +    I+   G  I++ KN+RICVDC
Sbjct: 678 GYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMKNIRICVDC 737

Query: 735 HTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           H   +  SK+  +EI+VRD NRFHHF+  +CSC  YW
Sbjct: 738 HNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 254/510 (49%), Gaps = 33/510 (6%)

Query: 1   VLKACTSKKDLFLGLQVHGIVV--FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           +  AC  KK +  G+ +H  ++       +D F+ N+L+ MY KCG+   +R LFD +P 
Sbjct: 84  LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           R+ VSW  L S Y     + E    F  M L+  RPNEF+ +S++ AC    D   G ++
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFRPNEFAFASVLCACE-EQDVKYGLQV 201

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVG---------NLEDAVAVFKDIEHPDIVSWNAVI 169
           H  ++K+  D  ++ ANAL+ MY+K             +DA  VFK +E+ +++SWN++I
Sbjct: 202 HAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMI 261

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTY---TSALKACAGM--------ELKELGRQ 218
           +G       D A+ LF  M  + I  N  T     S+L  C            LK    Q
Sbjct: 262 SGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNC-FQ 320

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSM--DEARMIFHLMPEKNLIAWNIVISGHLQN 276
           LHC  +K  + S+  V   LV  YA  G    D  ++      E ++++W  +IS   + 
Sbjct: 321 LHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAER 380

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
             + +A  LF  ++RE    D+ T S  LK+ A F       +VH+  +K  F +D  + 
Sbjct: 381 DPE-QAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVS 439

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N+LI AYG+ G +  + ++F E    DLV+  SM+ +YA  G  ++AL L+ +M   +++
Sbjct: 440 NALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVH 496

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADR 455
           PDS    +LL AC++    E+G Q+   + +  G        + +V++Y + G I +A+ 
Sbjct: 497 PDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEE 556

Query: 456 AFSEIPDR-GIVSWSAMIGGLAQHGRGKEA 484
              ++P +   V WS+++G   +HG    A
Sbjct: 557 LIRKMPMKPDSVIWSSLLGSCRKHGEADLA 586



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 15  LQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFI-DSRRLF-DAIPERSVVSWNSLFSCYV 72
            Q+H + V +G  S+  V  +LV  YA  G  I D  +LF D   E  +VSW ++ S + 
Sbjct: 319 FQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFA 378

Query: 73  HCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF 132
             D  E+A   F ++       +  + S  + ACA         ++H   +K G+ +D  
Sbjct: 379 ERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTV 437

Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
            +NAL+  Y + G+L  +  VF ++   D+VSWN+++    +H     AL LF+QM   +
Sbjct: 438 VSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---D 494

Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG-LVDMYAKCGSMDEA 251
           ++P+  T+ + L AC+   L E G Q+  S+ +    +  +     +VD+Y + G + EA
Sbjct: 495 VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEA 554

Query: 252 RMIFHLMPEK-NLIAWNIVISGHLQNGGDMEAASL 285
             +   MP K + + W+ ++ G  +  G+ + A L
Sbjct: 555 EELIRKMPMKPDSVIWSSLL-GSCRKHGEADLAKL 588


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/690 (34%), Positives = 384/690 (55%), Gaps = 4/690 (0%)

Query: 83  FFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA 142
           F + M ++GI  N  S   +   C   G    G+  H    ++  +S+ F  N ++ MY 
Sbjct: 67  FIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYC 125

Query: 143 KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
              +   A   F  I   D+ SW  +I+        D A+ LF +M    I PN   +++
Sbjct: 126 DCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFST 185

Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
            + + A   + +LG+Q+H  LI++E  +D  +   + +MY KCG +D A +  + M  K+
Sbjct: 186 LIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKS 245

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
            +A   ++ G+ Q   + +A  LF  M  EGV  D    S +LK+ A+   +   KQ+H+
Sbjct: 246 AVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHS 305

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
             +K   ES+  +   L+D Y KC   E A + F+     +  + +++I  Y Q G  + 
Sbjct: 306 YCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDR 365

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVN 442
           AL+++  ++ + +  +SF+ +++  AC+ +S    G Q+H   IK G ++     ++++ 
Sbjct: 366 ALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMIT 425

Query: 443 MYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
           MY+KCG +D A +AF  I     V+W+A+I   A HG+  EAL++F +M   GV PN +T
Sbjct: 426 MYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVT 485

Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
            + +L AC+H+GLV E K   +SM  K+G+ P  +HY CMIDI  RAG   EA+E++ +M
Sbjct: 486 FIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSM 545

Query: 563 PFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVA 622
           PF+ +   W +LLG     +N+E+G  AA+ +F ++P  S+T+V++ N+YA AG WD  A
Sbjct: 546 PFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAA 605

Query: 623 KVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVP 682
           + R+ M +  L+KE   SWI VK KV+ F VGDR H ++++IY+KL E++    K     
Sbjct: 606 QFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERL 665

Query: 683 MVETD-LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           + E + L D  E  K+QLL  HSE+LA+A+GLI T     I V KN R C DCH   + +
Sbjct: 666 LNEENALCDFTE-RKDQLL-DHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRV 723

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           S +  RE++VRD NRFHH  +G CSC  YW
Sbjct: 724 SVVTGRELVVRDGNRFHHINSGECSCRDYW 753



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 230/450 (51%), Gaps = 2/450 (0%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           +S++F+ N ++ MY  C +F  + R FD I +R + SW ++ S Y     ++EAV  F  
Sbjct: 111 NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLR 170

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+  GI PN    S++I + A      LG++IH   I++ + +D+     + +MY K G 
Sbjct: 171 MLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGW 230

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L+ A      +     V+   ++ G      N  AL LF +M S  +  + F ++  LKA
Sbjct: 231 LDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKA 290

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           CA +     G+Q+H   IK+ ++S+  VG  LVD Y KC   + AR  F  + E N  +W
Sbjct: 291 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 350

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
           + +I+G+ Q+G    A  +F  +  +GV  +    + + ++ ++   +    Q+HA ++K
Sbjct: 351 SALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIK 410

Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
               +     +++I  Y KCG V+ A + F      D VA T++I A+A  G   EAL+L
Sbjct: 411 KGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRL 470

Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYA 445
           + EMQ   + P+      LLNAC++    ++GKQ    +  K+G        N ++++Y+
Sbjct: 471 FKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYS 530

Query: 446 KCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           + G + +A      +P +  ++SW +++GG
Sbjct: 531 RAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 198/455 (43%), Gaps = 34/455 (7%)

Query: 11  LFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
           L LG Q+H  ++   F +D  +   +  MY KCG    +    + +  +S V+   L   
Sbjct: 196 LDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVG 255

Query: 71  YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
           Y       +A+  F +M+  G+  + F  S ++ ACA  GD   G++IH Y IKLG +S+
Sbjct: 256 YTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 315

Query: 131 MFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS 190
           +     LVD Y K    E A   F+ I  P+  SW+A+IAG       D AL++F+ ++S
Sbjct: 316 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRS 375

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
             +  N F Y +  +AC+ +     G Q+H   IK  + +       ++ MY+KCG +D 
Sbjct: 376 KGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDY 435

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
           A   F  + + + +AW  +I  H  +G   EA  LF  M   GV  +  T   +L + + 
Sbjct: 436 AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSH 495

Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
              +   KQ   L   T    D Y VN  ID Y                          M
Sbjct: 496 SGLVKEGKQF--LDSMT----DKYGVNPTIDHY------------------------NCM 525

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           I  Y++ GL  EAL++   M      PD     SLL  C +    E G     +I +   
Sbjct: 526 IDIYSRAGLLLEALEVIRSM---PFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDP 582

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
           + D+     + N+YA  G  D+A +    + +R +
Sbjct: 583 L-DSATYVIMFNLYALAGKWDEAAQFRKMMAERNL 616



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 147/275 (53%), Gaps = 4/275 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LKAC +  DL+ G Q+H   +  G +S+  V   LV  Y KC  F  +R+ F++I E +
Sbjct: 287 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 346

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
             SW++L + Y      + A+  FK +   G+  N F  +++  AC+   D + G +IH 
Sbjct: 347 DFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHA 406

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK G  + +   +A++ MY+K G ++ A   F  I+ PD V+W A+I     H     
Sbjct: 407 DAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASE 466

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
           AL+LF++M+ S + PN+ T+   L AC+   L + G+Q   S+   +   +P +     +
Sbjct: 467 ALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTD-KYGVNPTIDHYNCM 525

Query: 239 VDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG 272
           +D+Y++ G + EA  +   MP E ++++W  ++ G
Sbjct: 526 IDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/686 (36%), Positives = 378/686 (55%), Gaps = 46/686 (6%)

Query: 98  SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA---LVDMYAKVGNLEDAVAVF 154
           SL  ++ AC         R  H   + L + S   +A+A   L+  YA    L  A  V 
Sbjct: 14  SLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVL 73

Query: 155 KDIEHPD------IVSWNAVIAGCVLHEHNDWALKLFQQMKS--SEINPNMFTYTSALKA 206
           +    PD       V +N +I        +  AL LF  M+       P+ +TY  ALK+
Sbjct: 74  ES-SSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKS 132

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
           C+  +   LG Q+H ++ K+ +  +  V    + MY++CG  ++A  +F  MP +++++W
Sbjct: 133 CSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSW 192

Query: 267 NIVISGHLQNGGDMEAASLFP-WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSV 325
           N +I+G  + G    A  +F  ++  +G   D  T++ +L       A+G  K      V
Sbjct: 193 NAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILP------AMGNAKPDDIRFV 246

Query: 326 KTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALK 385
           +  F++                        FKE     L++  +M+  YA      +A++
Sbjct: 247 RRVFDNMQ----------------------FKE-----LISWNAMLAVYANNEFHVKAVE 279

Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
           L++ M+  E+ PDS   +++L  C  LSA+  GK++H  I +     +    N+L++MYA
Sbjct: 280 LFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYA 339

Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
            CG + DA   F  +  R ++SW+++I    +HG G+EA+ +F +ML  G+ P+ I  V+
Sbjct: 340 SCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVA 399

Query: 506 VLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQ 565
           VL AC+HAGL+A+ KH+F+SM  ++ I P  EHY CM+D+LGRAG   EA + + TM  +
Sbjct: 400 VLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIE 459

Query: 566 ANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVR 625
            N  VWGALL A RI+ N+++G  AA+ LF++ PE++  +VLLSN+YA AG W +V  VR
Sbjct: 460 PNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVR 519

Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
             M +  +KK PG S +E+ D+V+TF +GDR H +S+ IY KLDE+   +   GY P VE
Sbjct: 520 SVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVE 579

Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
             LHDVEE +KE  L  HSEKLA+AF L+ T PG  IRV  NLR C DCH + + IS I 
Sbjct: 580 ATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIIT 639

Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
            REI+++D NR HH   G CSCG YW
Sbjct: 640 CREIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 193/427 (45%), Gaps = 42/427 (9%)

Query: 36  LVVMYAKCGNFIDSRRLF-----DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
           L+  YA C     +  +      D     + V +N L           +A+  F  M   
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 91  GIR--PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
           G    P+ ++    + +C+ S D LLG +IH    KL  D +++ A++ + MY++ G  E
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN-PNMFTYTSALKAC 207
           DA  VF  + H D+VSWNA+IAG       D A+++F+Q    + + P+  T    L A 
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAM 235

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
                                              AK   +   R +F  M  K LI+WN
Sbjct: 236 GN---------------------------------AKPDDIRFVRRVFDNMQFKELISWN 262

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +++ +  N   ++A  LF  M ++ V  D  TL+TVL       A  V K++H +  + 
Sbjct: 263 AMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRK 322

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
               +  + N+L+D Y  CG ++DA +IF   SA D+++ TS+I+AY + G G EA+ L+
Sbjct: 323 NMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLF 382

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII-KFGFMSDTFAGNSLVNMYAK 446
            +M  + + PDS    ++L AC++      GK     +  ++  +        +V++  +
Sbjct: 383 EKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGR 442

Query: 447 CGSIDDA 453
            G I++A
Sbjct: 443 AGCINEA 449



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 71/342 (20%)

Query: 2   LKACTSKKDLFLGLQVHGIV------------------------------VFTGFDSDEF 31
           LK+C++ KDL LGLQ+H  V                              VF G    + 
Sbjct: 130 LKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDV 189

Query: 32  VA-NSLVVMYAKCGNFIDS--------------------------------------RRL 52
           V+ N+++  +A+ G F  +                                      RR+
Sbjct: 190 VSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRV 249

Query: 53  FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
           FD +  + ++SWN++ + Y + +F  +AV  F  M    + P+  +L++++  C      
Sbjct: 250 FDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAF 309

Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
            +G++IH    +     ++   NAL+DMYA  G L+DA  +F  +   D++SW ++I+  
Sbjct: 310 SVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAY 369

Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSD 231
             H H   A+ LF++M    + P+   + + L AC+   L   G+    S+  +  I   
Sbjct: 370 GKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPK 429

Query: 232 PIVGVGLVDMYAKCGSMDEAR-MIFHLMPEKNLIAWNIVISG 272
                 +VD+  + G ++EA   I  ++ E N   W  ++  
Sbjct: 430 AEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQA 471



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 6/186 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL  C       +G ++H I+       +  + N+L+ MYA CG   D+R +FD +  R 
Sbjct: 299 VLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARD 358

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V+SW S+ S Y       EAV  F++M+  G+ P+  +  +++ AC+ +G  LL    H 
Sbjct: 359 VISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAG--LLADGKHY 416

Query: 121 YSIKLGYDSDMFSA---NALVDMYAKVGNLEDAVAVFKD-IEHPDIVSWNAVIAGCVLHE 176
           +         +  A     +VD+  + G + +A       +  P+   W A++  C +H 
Sbjct: 417 FDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHS 476

Query: 177 HNDWAL 182
           + D  L
Sbjct: 477 NMDIGL 482


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/677 (35%), Positives = 381/677 (56%), Gaps = 5/677 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC + K L  G  +H  VV  G  +D F+  +L+ +Y  C  +  ++ +FD +    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68

Query: 61  VVS-WNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +S WN L + Y       EA+  F++++    ++P+ ++  S++ AC G    +LG+ I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H   +K G   D+   ++LV MYAK    E A+ +F ++   D+  WN VI+ C     N
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS-CYYQSGN 187

Query: 179 -DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
              AL+ F  M+     PN  T T+A+ +CA +     G ++H  LI      D  +   
Sbjct: 188 FKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSA 247

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           LVDMY KCG ++ A  +F  MP+K ++AWN +ISG+   G  +    LF  MY EGV   
Sbjct: 248 LVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPT 307

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
            TTLS+++   +    +   K VH  +++   +SD +I +SL+D Y KCG VE A  IFK
Sbjct: 308 LTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFK 367

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                 +V+   MI+ Y   G   EAL L+ EM+   + PD+   +S+L AC+ L+A E+
Sbjct: 368 LIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEK 427

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+++H  II+    ++     +L++MYAKCG++D+A   F  +P R +VSW++MI     
Sbjct: 428 GEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGS 487

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HG+   AL++F +ML+  + P+ +T +++L AC HAGLV E  ++F  M   +GI P  E
Sbjct: 488 HGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVE 547

Query: 538 HYACMIDILGRAGKFQEAMELVDTMP-FQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
           HY+C+ID+LGRAG+  EA E++   P  + +  +   L  A R+++N+++G   A  L  
Sbjct: 548 HYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID 607

Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
            +P+ SST++LLSN+YASA  WD V  VR  MK+  LKK PG SWIE+  K+  F V D 
Sbjct: 608 KDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDN 667

Query: 657 SHARSKEIYAKLDEVSD 673
           SH   + ++  L  +SD
Sbjct: 668 SHLHLELVFKCLSYLSD 684



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 272/516 (52%), Gaps = 8/516 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L  ++ AC  S     G+ IH   + LG  +D+F    L+++Y      + A  VF ++E
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65

Query: 159 HP-DIVSWNAVIAGCVLHEHNDWALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKELG 216
           +P +I  WN ++AG   +     AL+LF++ +    + P+ +TY S LKAC G+    LG
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H  L+K  +  D +VG  LV MYAKC + ++A  +F+ MPEK++  WN VIS + Q+
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   EA   F  M R G   +  T++T + S A    +    ++H   + + F  D +I 
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           ++L+D YGKCGH+E A+++F++     +VA  SMI+ Y   G     ++L+  M +  + 
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVK 305

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P     SSL+  C+  +   +GK VH + I+    SD F  +SL+++Y KCG ++ A+  
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENI 365

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGL 515
           F  IP   +VSW+ MI G    G+  EAL +F +M +  V P+ IT  SVL AC+  A L
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAAL 425

Query: 516 VAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
               + H   +EKK     +      ++D+  + G   EA  +   +P + +   W +++
Sbjct: 426 EKGEEIHNLIIEKKLDNNEVV--MGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMI 482

Query: 576 GAARIYKNVEVG-QHAAEMLFA-IEPEKSSTHVLLS 609
            A   +    V  +  AEML + ++P++ +   +LS
Sbjct: 483 TAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILS 518


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/612 (37%), Positives = 361/612 (58%), Gaps = 31/612 (5%)

Query: 191 SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDE 250
           SEI      +++ L+AC  ++   LG+QLH  +      SD  +   L+++Y+K G +  
Sbjct: 63  SEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQA 122

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF-------------- 296
           A  +F  MP +N+++ NI+I  +L  G    A +LF  M    V                
Sbjct: 123 AVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMN 182

Query: 297 -----------------DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
                            D+ +L +VL+  A   A+   +QVHA  +K  FE +  +  SL
Sbjct: 183 EEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSL 242

Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
              Y K G + D  ++        LVA  ++++  AQ G  E  L  Y  M+     PD 
Sbjct: 243 AHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDK 302

Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
               S++++C+ L+   QGKQ+H   +K G  S+    +SLV+MY++CG + D+ + F E
Sbjct: 303 ITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLE 362

Query: 460 IPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA 519
             +R +V WS+MI     HG+G+EA+++F +M ++ +  N IT +S+L AC+H GL  + 
Sbjct: 363 CKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKG 422

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
              F+ M KK+G++   +HY C++D+LGR+G  +EA  ++ +MP +A+A +W  LL A +
Sbjct: 423 LGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACK 482

Query: 580 IYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
           I+KN E+ +  A+ +  I+P+ S+++VLL+NIY+SA  W NV++VRR MKD  +KKEPG+
Sbjct: 483 IHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGI 542

Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQL 699
           SW+EVK++V+ F +GD  H +  EI   L+E++  + + GYVP   + LHD++  EKEQ+
Sbjct: 543 SWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQI 602

Query: 700 LYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHH 759
           L HHSEKLA+AF L+ TP G  IRV KNLR+C DCH + ++IS+I   EIIVRD +RFHH
Sbjct: 603 LRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHH 662

Query: 760 FRNGSCSCGGYW 771
           F+NG+CSCG YW
Sbjct: 663 FKNGTCSCGDYW 674



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 212/441 (48%), Gaps = 33/441 (7%)

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
           E  LS I       S+++ AC       LG+++H      G  SD F +N L+++Y+K G
Sbjct: 59  ESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFG 118

Query: 146 NLEDAVAVFKDI-----------------------------EHPD--IVSWNAVIAGCVL 174
            L+ AVA+F  +                             E PD  + +WNA++ G   
Sbjct: 119 ELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTK 178

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
            E N+ AL LF +M      P+ ++  S L+ CA +     G+Q+H  ++K   + + +V
Sbjct: 179 FEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVV 238

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  L  MY K GSM +   + + MP+ +L+AWN ++SG  Q G        +  M   G 
Sbjct: 239 GCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGF 298

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D+ T  +V+ S +    +   KQ+HA +VK    S+  +V+SL+  Y +CG ++D++K
Sbjct: 299 RPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIK 358

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
            F E    D+V  +SMI AY   G GEEA+KL+ EM+   +  +     SLL AC++   
Sbjct: 359 TFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGL 418

Query: 415 YEQGKQV-HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRG-IVSWSAMI 472
            ++G  +  + + K+G  +       LV++  + G +++A+     +P +   + W  ++
Sbjct: 419 KDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLL 478

Query: 473 GGLAQHGRGKEALQMFGQMLE 493
                H   + A ++  ++L 
Sbjct: 479 SACKIHKNAEIARRVADEVLR 499



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 166/336 (49%), Gaps = 31/336 (9%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+AC   K + LG Q+H ++  +G  SD+F++N L+ +Y+K G    +  LFD +P R+
Sbjct: 75  LLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRN 134

Query: 61  VVS-------------------------------WNSLFSCYVHCDFLEEAVCFFKEMVL 89
           ++S                               WN++ +     +  EEA+  F  M  
Sbjct: 135 IMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNE 194

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
               P+E+SL S++  CA  G  L G+++H Y +K G++ ++    +L  MY K G++ D
Sbjct: 195 LSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHD 254

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
              V   +    +V+WN +++G     + +  L  +  MK +   P+  T+ S + +C+ 
Sbjct: 255 GERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSE 314

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           + +   G+Q+H   +K    S+  V   LV MY++CG + ++   F    E++++ W+ +
Sbjct: 315 LAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSM 374

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           I+ +  +G   EA  LF  M +E +  ++ T  ++L
Sbjct: 375 IAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLL 410



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 44/305 (14%)

Query: 267 NIVISGHLQNGGDMEAASLFPWMYREG------------VGFDQTTLSTVLKSVASFQAI 314
            I    H QNG   +    F  +  +G            +  +    S +L++    +++
Sbjct: 26  TISFKTHFQNGRFSDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSV 85

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
            + KQ+H+L   +   SD +I N L++ Y K G ++ AV +F      ++++C  MI AY
Sbjct: 86  SLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAY 145

Query: 375 -------------------------------AQFGLGEEALKLYLEMQDREINPDSFVCS 403
                                           +F + EEAL L+  M +    PD +   
Sbjct: 146 LGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLG 205

Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
           S+L  CA+L A   G+QVH +++K GF  +   G SL +MY K GS+ D +R  + +PD 
Sbjct: 206 SVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDC 265

Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-H 522
            +V+W+ ++ G AQ G  +  L  +  M   G  P+ IT VSV+ +C+   ++ + K  H
Sbjct: 266 SLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIH 325

Query: 523 FESME 527
            E+++
Sbjct: 326 AEAVK 330



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 147/274 (53%), Gaps = 2/274 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C     L  G QVH  V+  GF+ +  V  SL  MY K G+  D  R+ + +P+ S
Sbjct: 207 VLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCS 266

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V+WN+L S      + E  +  +  M ++G RP++ +  S+I++C+       G++IH 
Sbjct: 267 LVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHA 326

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            ++K G  S++   ++LV MY++ G L+D++  F + +  D+V W+++IA    H   + 
Sbjct: 327 EAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEE 386

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLV 239
           A+KLF +M+   +  N  T+ S L AC+   LK+ G  L   ++ K  +K+       LV
Sbjct: 387 AIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLV 446

Query: 240 DMYAKCGSMDEARMIFHLMPEK-NLIAWNIVISG 272
           D+  + G ++EA  +   MP K + I W  ++S 
Sbjct: 447 DLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSA 480


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/802 (31%), Positives = 395/802 (49%), Gaps = 78/802 (9%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE---RSVVSWNSLFS 69
           L  Q+H + V TG   D  V  +LV + A+ G      RL     E   +  V WN   +
Sbjct: 70  LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
                +  +EA+  F+EM   G+  + ++ + +++AC  +G    GR +H Y++KL  D+
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA 189

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIA------------------- 170
                  L  MYA+  ++  A  V   +    +V WNAV+A                   
Sbjct: 190 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 249

Query: 171 ----------------GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
                           GC  H  +  AL +   M    + P+  T +S LK+ A   L  
Sbjct: 250 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 309

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G ++HC  ++ +++ D   G  LVDMYAKCG +D A+ +   +  +NL  WN +++G+ 
Sbjct: 310 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYA 369

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
             G                  FD                  +  ++  L  K   + D  
Sbjct: 370 NAG-----------------RFD------------------IALELVELMKKNRLDPDIT 394

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAV----DLVACTSMITAYAQFGLGEEALKLYLEM 390
             N LI  Y   G    AV + ++  A     ++V+ TS+I+     G  E++     EM
Sbjct: 395 TWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEM 454

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q   + P     S LL ACA L+  ++GK++H   ++  +  D     +L++MY+K GS+
Sbjct: 455 QKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSL 514

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             A   F  I  + +V  +AM+ GLA HG+G+EA+++F  M   G+ P+ IT  ++L AC
Sbjct: 515 VSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTAC 574

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
              GLV E   +F+SME K+G++P  E+YACM+D+L R G   EAM+ ++  P    AS 
Sbjct: 575 RSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASH 634

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           WGALL    I+ N+ + + AA  LF +EP  S+ ++L+ N+Y    M+D    ++  MK 
Sbjct: 635 WGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKA 694

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             +   PG SWI+++  ++ F V  + H  + EIY +L  +   + KAGYVP      ++
Sbjct: 695 RGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYN 754

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPG-ATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           V+E EKE+LL  H+EKLA+ +GLI +    A +RV KN R+C DCH   + IS +  R+I
Sbjct: 755 VQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQI 814

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           I+RD  RFHHF +G CSC  YW
Sbjct: 815 ILRDAVRFHHFVDGKCSCNDYW 836



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 197/469 (42%), Gaps = 107/469 (22%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G  VH   +    D+   V   L  MYA+  +   + R+ DA+   S
Sbjct: 162 VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221

Query: 61  VVSWNSLFSCYVHC----DFLE-------------------------------EAVCFFK 85
           VV WN++ +C        D LE                               EA+    
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+  G+RP+  ++SS++ + A +G    G +IH + ++   + D+++  ALVDMYAK G
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341

Query: 146 NLEDAVAVFKDIEH-----------------------------------PDIVSWNAVIA 170
            L+ A  V   +EH                                   PDI +WN +I 
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA-------------CAGME------ 211
           G  ++  +  A+ L +Q+K++ + PN+ ++TS +               C  M+      
Sbjct: 402 GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461

Query: 212 ----------------LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
                           L++ G++LHC  ++     D +V   L+DMY+K GS+  A++IF
Sbjct: 462 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 521

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             + +KNL+  N +++G   +G   EA  LF  M+  G+  D  T + +L +  S   + 
Sbjct: 522 ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 581

Query: 316 V-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
              +   ++  K   +        ++D   +CG++++A+  F E S +D
Sbjct: 582 EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMD-FIERSPID 629



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 163/381 (42%), Gaps = 39/381 (10%)

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE---KNLIAWNIV 269
           + L  QLH   ++  +  DP V   LVD+ A+ G       + H   E   K+ + WN  
Sbjct: 68  RRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKH 127

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ++   +     EA ++F  M   GV  D  T + VL +     A+   + VHA ++K A 
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLAL 187

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           ++   +   L   Y +   V  A ++     A  +V   +++   A+ GL ++AL+L   
Sbjct: 188 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 247

Query: 390 M-----------------------QDRE------------INPDSFVCSSLLNACANLSA 414
           M                       +DRE            + PD+   SSLL + AN   
Sbjct: 248 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGL 307

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              G ++H   ++     D + G +LV+MYAKCG +D A +    +  R + +W++++ G
Sbjct: 308 LRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAG 367

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A  GR   AL++   M ++ + P+  T   ++   +  G  ++A      + K  G+ P
Sbjct: 368 YANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTP 426

Query: 535 MQEHYACMIDILGRAGKFQEA 555
               +  +I      G+++++
Sbjct: 427 NVVSWTSLISGSCHNGEYEDS 447


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/630 (37%), Positives = 375/630 (59%), Gaps = 41/630 (6%)

Query: 178 NDWALKLFQQMKSSEI--NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
           ND  +K      +SEI  +P++F++   L++C  +     G+Q+H  +I      D  + 
Sbjct: 43  NDGRIKQAYDTFTSEIWSDPSLFSHL--LQSCIKLGSLFGGKQVHSLIITSGGSKDKFIS 100

Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA------------ 283
             L++ Y+K G    + ++F  MP +N++++NI+I+G+LQ G D+E+A            
Sbjct: 101 NHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLG-DLESAQKLFDEMSERNI 159

Query: 284 --------------------SLFPWMYREGVGF--DQTTLSTVLKSVASFQAIGVCKQVH 321
                               SLF  MY  G+GF  D+ TL +VL+  A  +++   ++VH
Sbjct: 160 ATWNAMIAGLTQFEFNKQALSLFKEMY--GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVH 217

Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
           A  +K  FE    + +SL   Y K G + D  K+ K      +VA  ++I   AQ G  E
Sbjct: 218 ACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPE 277

Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
           E L  Y  M+     PD     S+L+AC+ L+   QG+Q+H  +IK G  S     +SL+
Sbjct: 278 EVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLI 337

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
           +MY++ G ++D+ +AF +  +  +V WS+MI     HGRG+EAL++F QM +  +  N +
Sbjct: 338 SMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEV 397

Query: 502 TLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDT 561
           T +S+L AC+H+GL  +   +F+ M KK+ ++P  EHY C++D+LGRAG+ +EA  ++ +
Sbjct: 398 TFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRS 457

Query: 562 MPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNV 621
           MP Q +  +W  LL A +++K  E+ +  +E +  ++P  ++++VLLSNI+ASA  W NV
Sbjct: 458 MPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNV 517

Query: 622 AKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYV 681
           +++R+ M+D  ++KEPG+SW+E+K+ V+ F++GD+SH +  EI   L E+   L + GYV
Sbjct: 518 SQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYV 577

Query: 682 PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFI 741
           P + + LHD++  EKE  L HHSEK A+AF L+ T     IRV KNLR+C DCH + + I
Sbjct: 578 PELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCI 637

Query: 742 SKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           S+I +REIIVRD +RFHHF++G CSCG YW
Sbjct: 638 SRIRNREIIVRDASRFHHFKDGECSCGNYW 667



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 201/400 (50%), Gaps = 18/400 (4%)

Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGY------------DSDMFSANALVDMYAKVGNLE 148
           S+I    GS D  +   +  +  KLG               ++ S N L++ Y ++G+LE
Sbjct: 86  SLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLE 145

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
            A  +F ++   +I +WNA+IAG    E N  AL LF++M      P+ FT  S L+ CA
Sbjct: 146 SAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCA 205

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
           G+     G+++H  L+K   +   +VG  L  MY K GS+ +   +   MP + ++AWN 
Sbjct: 206 GLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNT 265

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +I+G  QNG   E  + +  M   G   D+ T  +VL + +    +G  +Q+HA  +K  
Sbjct: 266 LIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAG 325

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
             S   +V+SLI  Y + G +ED++K F +    D+V  +SMI AY   G GEEAL+L+ 
Sbjct: 326 ASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFH 385

Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKC 447
           +M+D ++  +     SLL AC++    E+G +   + + K+           +V++  + 
Sbjct: 386 QMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRA 445

Query: 448 GSIDDAD---RAFSEIPDRGIVSWSAMIGGLAQHGRGKEA 484
           G +++A+   R+    PD GI+ W  ++     H   + A
Sbjct: 446 GRLEEAEGMIRSMPVQPD-GII-WKTLLAACKLHKEAEMA 483



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/579 (22%), Positives = 249/579 (43%), Gaps = 81/579 (13%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDS----------- 49
           +L++C     LF G QVH +++ +G   D+F++N L+  Y+K G F  S           
Sbjct: 68  LLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRN 127

Query: 50  --------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
                               ++LFD + ER++ +WN++ +     +F ++A+  FKEM  
Sbjct: 128 VMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYG 187

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
            G  P+EF+L S++  CAG    L G+++H   +K G++      ++L  MY K G+L D
Sbjct: 188 LGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSD 247

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
              + K +    +V+WN +IAG   +   +  L  +  MK +   P+  T+ S L AC+ 
Sbjct: 248 GEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSE 307

Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
           +     G+Q+H  +IK    S   V   L+ MY++ G ++++   F      +++ W+ +
Sbjct: 308 LATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSM 367

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           I+ +  +G   EA  LF  M    +  ++ T  ++L + +           H+   +   
Sbjct: 368 IAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACS-----------HSGLKEKGT 416

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           E  D +                 VK +K    ++   C  ++    + G  EEA  +   
Sbjct: 417 EYFDLM-----------------VKKYKLKPRIEHYTC--VVDLLGRAGRLEEAEGMIRS 457

Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
           M    + PD  +  +LL AC      E  +++   IIK   + D  +   L N++A   +
Sbjct: 458 M---PVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPL-DAASYVLLSNIHASARN 513

Query: 450 IDDADRAFSEIPDRGI-----VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLV 504
             +  +    + DR +     +SW  +   + Q   G ++   + ++         + L 
Sbjct: 514 WLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEI--------DLYLK 565

Query: 505 SVLCACNHAGLVAE---AKHHFESMEKKFGIQPMQEHYA 540
            ++      G V E     H  ++ EK++ +    E +A
Sbjct: 566 ELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFA 604


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/558 (42%), Positives = 325/558 (58%), Gaps = 35/558 (6%)

Query: 246 GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
           GS+  AR++F+ +P       N +I G+       +A   +  M  +G+  D+ T  ++ 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
           KS      +   KQ+H  S K  F SD YI N+L++ Y  CG +  A K+F +     +V
Sbjct: 86  KSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142

Query: 366 ACTSMITAYAQFGLG--------------------------------EEALKLYLEMQDR 393
           +  +MI AYAQ+ L                                 EEAL L+ EMQ  
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202

Query: 394 EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
            +  D    +SLL AC +L A E GK +HV+I K     D   G +LV+MYAKCGSI+ A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262

Query: 454 DRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHA 513
            R F E+P++ +++W+A+I GLA  G+G +AL++F +M    V P+ IT V VL AC+HA
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322

Query: 514 GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
           GLV E   +F SM  K+GIQP  EHY CM+D+LGRAG+  EA +L+  MP   +  V   
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382

Query: 574 LLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
           LL A RI+ N+ V + AA+ L  ++P+   T+VLLSNIY+S   W+   K+R  M +  +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442

Query: 634 KKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEE 693
           KK PG S IEV   V+ F  GD SH +S EIY  LD++   L  AGYVP     L D++E
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502

Query: 694 SEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRD 753
            EKE  L  HSEKLA+AFGL++T PG  IRV KNLR+C DCH++ +FIS++ +REIIVRD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562

Query: 754 VNRFHHFRNGSCSCGGYW 771
            NRFHHF  GSCSC  +W
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 191/429 (44%), Gaps = 73/429 (17%)

Query: 29  DEFVANSLVVMYA--KCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D F A+ +V   A    G+   +R +F+ IP  +  + NS+   Y + +   +A+ F++ 
Sbjct: 9   DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQL 68

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           M+L G+ P+ F+  S+  +C   G    G+++H +S KLG+ SD +  N L++MY+  G 
Sbjct: 69  MMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125

Query: 147 LEDAVAVFKDIEHPDIVSW--------------------------------NAVIAGCVL 174
           L  A  VF  + +  +VSW                                N +I G V 
Sbjct: 126 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVE 185

Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
               + AL LF +M+ S +  +  T  S L AC  +   ELG+ LH  + K +I+ D  +
Sbjct: 186 DSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL 245

Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
           G  LVDMYAKCGS++ A  +F  MPEK+++ W  +I G    G  ++A  LF  M    V
Sbjct: 246 GTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 305

Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
             D  T   VL +         C     ++   A+       NS+ + YG          
Sbjct: 306 KPDAITFVGVLAA---------CSHAGLVNEGIAY------FNSMPNKYGI--------- 341

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC---AN 411
                 +++   C  M+    + G   EA  L   +Q+  + PD FV   LL+AC    N
Sbjct: 342 ----QPSIEHYGC--MVDMLGRAGRIAEAEDL---IQNMPMAPDYFVLVGLLSACRIHGN 392

Query: 412 LSAYEQGKQ 420
           L   E+  Q
Sbjct: 393 LVVAERAAQ 401



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 33/279 (11%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G Q+H      GF SD ++ N+L+ MY+ CG  + +R++FD +  +SVVSW ++   Y  
Sbjct: 94  GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 153

Query: 74  CDF--------------------------------LEEAVCFFKEMVLSGIRPNEFSLSS 101
            D                                  EEA+  F EM LSG++ ++ +++S
Sbjct: 154 WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 213

Query: 102 MINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD 161
           ++ AC   G   LG+ +H Y  K   + D+    ALVDMYAK G++E A+ VF+++   D
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273

Query: 162 IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC 221
           +++W A+I G  +      AL+LF +M+ SE+ P+  T+   L AC+   L   G     
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 333

Query: 222 SLIKMEIKSDPIVGVG-LVDMYAKCGSMDEARMIFHLMP 259
           S+         I   G +VDM  + G + EA  +   MP
Sbjct: 334 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 9/237 (3%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L ACT    L LG  +H  +     + D  +  +LV MYAKCG+   + R+F  +PE+ 
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           V++W +L      C    +A+  F EM +S ++P+  +   ++ AC+ +G  L+   I  
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG--LVNEGIAY 331

Query: 121 YSI---KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH-PDIVSWNAVIAGCVLHE 176
           ++    K G    +     +VDM  + G + +A  + +++   PD      +++ C +H 
Sbjct: 332 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 391

Query: 177 HNDWALKLFQQMKSSEINP-NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
           +   A +  QQ+   E++P N  TY       + M+  E  +++   +++  IK  P
Sbjct: 392 NLVVAERAAQQL--IELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 446


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/524 (42%), Positives = 329/524 (62%), Gaps = 3/524 (0%)

Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE--GVGFD-QTTLSTVLKS 307
           AR +F  MP ++  +W+ ++S H ++G    A +++  M RE    G D + T S+ L +
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAA 171

Query: 308 VASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVAC 367
             + +     +++H   V+   ++D  + ++L D Y KCG V+DA  +F      D+V+ 
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSW 231

Query: 368 TSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK 427
           T+M+  Y       E  +L++ M    I P+ F  + +L ACA  ++ + GKQVH  + K
Sbjct: 232 TAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTK 291

Query: 428 FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQM 487
                  FA ++LV+MY+K G +  A R F  +P   +VSW+AMI G AQ+G+  EAL+ 
Sbjct: 292 SRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRY 351

Query: 488 FGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILG 547
           F  +L  G  P+H+T V VL AC HAGLV +    F S++ ++GI+   +HYAC+ID+L 
Sbjct: 352 FDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLS 411

Query: 548 RAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVL 607
           R+G F+ A E+++TM  + N  +W +LLG  RI+KNV + + AAE LF IEPE  +T+V 
Sbjct: 412 RSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVT 471

Query: 608 LSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAK 667
           L+NIYAS G++D V   RR M+   + K P  SWIEV  +++ F VGD+ H +++++YA 
Sbjct: 472 LANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYAL 531

Query: 668 LDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKN 727
           L ++   + + GYV      LHDVE+ +K+Q + +HSE+LAVAFG+IATP GA I+V KN
Sbjct: 532 LKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKN 591

Query: 728 LRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           LRIC DCHT+ + ISKIV REIIVRD NRFHHF+NGSCSC  YW
Sbjct: 592 LRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 180/381 (47%), Gaps = 39/381 (10%)

Query: 34  NSLVVMYAKCGNFIDSRR-LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL--- 89
           N+LV    +    + S R LFD +P R   SW+++ S +        A+  ++ M+    
Sbjct: 96  NTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPG 155

Query: 90  -SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
            +G+  NEF+ SS + A   +  +  GR++H + ++ G D+D    +AL DMYAK G ++
Sbjct: 156 SAGV-DNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVD 214

Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           DA +VF  +   D+VSW A++        +    +LF +M  S I PN FTY   L+ACA
Sbjct: 215 DARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACA 274

Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
               ++LG+Q+H  + K            LV MY+K G M  A  +F  MP+ +L++W  
Sbjct: 275 EFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTA 334

Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
           +ISG+ QNG   EA   F  + R G   D  T   VL + A           HA  V   
Sbjct: 335 MISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACA-----------HAGLVDKG 383

Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
                 I +S+ D YG    +E            D  AC  +I   ++ GL E A ++  
Sbjct: 384 LS----IFHSIKDEYG----IE---------HTADHYAC--VIDLLSRSGLFERAEEMIN 424

Query: 389 EMQDREINPDSFVCSSLLNAC 409
            M    + P+ F+ +SLL  C
Sbjct: 425 TMS---VKPNKFLWASLLGGC 442



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 6/263 (2%)

Query: 14  GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
           G ++H  VV  G D+D  V ++L  MYAKCG   D+R +FD +P R VVSW ++   Y  
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFD 240

Query: 74  CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS 133
                E    F  M+ SGI+PNEF+ + ++ ACA      LG+++HG   K       F+
Sbjct: 241 ARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFA 300

Query: 134 ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
            +ALV MY+K G++  AV VF+ +   D+VSW A+I+G   +   D AL+ F  +  S  
Sbjct: 301 ESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGC 360

Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSL---IKMEIKSDPIVGVGLVDMYAKCGSMDE 250
            P+  T+   L ACA   L + G  +  S+     +E  +D    V  +D+ ++ G  + 
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACV--IDLLSRSGLFER 418

Query: 251 ARMIFHLMPEK-NLIAWNIVISG 272
           A  + + M  K N   W  ++ G
Sbjct: 419 AEEMINTMSVKPNKFLWASLLGG 441



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 34/263 (12%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC       LG QVHG +  +      F  ++LV MY+K G+   + R+F  +P+  
Sbjct: 269 VLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLD 328

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSW ++ S Y      +EA+ +F  ++ SG RP+  +   +++ACA +G    G  I  
Sbjct: 329 LVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIF- 387

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           +SIK     D +      D YA V +L     +F+  E                      
Sbjct: 388 HSIK-----DEYGIEHTADHYACVIDLLSRSGLFERAE---------------------- 420

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
                + + +  + PN F + S L  C   +   L R    +L ++E   +P   V L +
Sbjct: 421 -----EMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIE-PENPATYVTLAN 474

Query: 241 MYAKCGSMDEARMIFHLMPEKNL 263
           +YA  G  DE      +M  K +
Sbjct: 475 IYASVGLFDEVENTRRIMELKGI 497


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/802 (31%), Positives = 395/802 (49%), Gaps = 78/802 (9%)

Query: 13  LGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE---RSVVSWNSLFS 69
           L  Q+H + V TG   D  V  +LV + A+ G      RL     E   +  V WN   +
Sbjct: 70  LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129

Query: 70  CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
                +  +EA+  F+EM   G+  + ++ + +++AC  +G    GR +H Y++KL  D+
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA 189

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
                  L  MYA+  ++  A  V   +    +V WNAV+A C      D AL+L  +M 
Sbjct: 190 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 249

Query: 190 SSEINPNMFTYTSALKAC-----------------------------------AGMELKE 214
            S   PN+ T+ + L  C                                   A   L  
Sbjct: 250 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 309

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G ++HC  ++ +++ D   G  LVDMYAKCG +D A+ +   +  +NL  WN +++G+ 
Sbjct: 310 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYA 369

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
             G                  FD                  +  ++  L  K   + D  
Sbjct: 370 NAG-----------------RFD------------------IALELVELMKKNRLDPDIT 394

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAV----DLVACTSMITAYAQFGLGEEALKLYLEM 390
             N LI  Y   G    AV + ++  A     ++V+ TS+I+     G  E++     EM
Sbjct: 395 TWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEM 454

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
           Q   + P     S LL ACA L+  ++GK++H   ++  +  D     +L++MY+K GS+
Sbjct: 455 QKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSL 514

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
             A   F  I  + +V  +AM+ GLA HG+G+EA+++F  M   G+ P+ IT  ++L AC
Sbjct: 515 VSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTAC 574

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
              GLV E   +F+SME K+G++P  E+YACM+D+L R G   EAM+ ++  P    AS 
Sbjct: 575 RSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASH 634

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           WGALL    I+ N+ + + AA  LF +EP  S+ ++L+ N+Y    M+D    ++  MK 
Sbjct: 635 WGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKA 694

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
             +   PG SWI+++  ++ F V  + H  + EIY +L  +   + KAGYVP      ++
Sbjct: 695 RGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYN 754

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPG-ATIRVKKNLRICVDCHTSFEFISKIVSREI 749
           V+E EKE+LL  H+EKLA+ +GLI +    A +RV KN R+C DCH   + IS +  R+I
Sbjct: 755 VQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQI 814

Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
           I+RD  RFHHF +G CSC  YW
Sbjct: 815 ILRDAVRFHHFVDGKCSCNDYW 836



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 197/469 (42%), Gaps = 107/469 (22%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G  VH   +    D+   V   L  MYA+  +   + R+ DA+   S
Sbjct: 162 VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221

Query: 61  VVSWNSLFSCYVHC----DFLE-------------------------------EAVCFFK 85
           VV WN++ +C        D LE                               EA+    
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281

Query: 86  EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
            M+  G+RP+  ++SS++ + A +G    G +IH + ++   + D+++  ALVDMYAK G
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341

Query: 146 NLEDAVAVFKDIEH-----------------------------------PDIVSWNAVIA 170
            L+ A  V   +EH                                   PDI +WN +I 
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401

Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA-------------CAGME------ 211
           G  ++  +  A+ L +Q+K++ + PN+ ++TS +               C  M+      
Sbjct: 402 GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461

Query: 212 ----------------LKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
                           L++ G++LHC  ++     D +V   L+DMY+K GS+  A++IF
Sbjct: 462 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 521

Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
             + +KNL+  N +++G   +G   EA  LF  M+  G+  D  T + +L +  S   + 
Sbjct: 522 ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 581

Query: 316 V-CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVD 363
              +   ++  K   +        ++D   +CG++++A+  F E S +D
Sbjct: 582 EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMD-FIERSPID 629



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 163/381 (42%), Gaps = 39/381 (10%)

Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE---KNLIAWNIV 269
           + L  QLH   ++  +  DP V   LVD+ A+ G       + H   E   K+ + WN  
Sbjct: 68  RRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKH 127

Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
           ++   +     EA ++F  M   GV  D  T + VL +     A+   + VHA ++K A 
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLAL 187

Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
           ++   +   L   Y +   V  A ++     A  +V   +++   A+ GL ++AL+L   
Sbjct: 188 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 247

Query: 390 M-----------------------QDRE------------INPDSFVCSSLLNACANLSA 414
           M                       +DRE            + PD+   SSLL + AN   
Sbjct: 248 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGL 307

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
              G ++H   ++     D + G +LV+MYAKCG +D A +    +  R + +W++++ G
Sbjct: 308 LRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAG 367

Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
            A  GR   AL++   M ++ + P+  T   ++   +  G  ++A      + K  G+ P
Sbjct: 368 YANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTP 426

Query: 535 MQEHYACMIDILGRAGKFQEA 555
               +  +I      G+++++
Sbjct: 427 NVVSWTSLISGSCHNGEYEDS 447


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 390/689 (56%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           V+KAC    ++ L + VH      GF  D F  ++L+ +YA  G   D+RR+FD +P R 
Sbjct: 118 VIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRD 177

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WN +   YV     + A+  F EM  S    N  + + +++ CA  G+   G ++HG
Sbjct: 178 TILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHG 237

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
             I  G++ D   AN LV MY+K GNL  A  +F  +   D V+WN +IAG V +   D 
Sbjct: 238 LVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDE 297

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A  LF  M S+ + P+  T+ S L +          +++H  +++  +  D  +   L+D
Sbjct: 298 AAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALID 357

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           +Y K G ++ AR IF      ++     +ISG++ +G +++A + F W+ +EG+  +  T
Sbjct: 358 VYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLT 417

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           +++VL + A+  A+   K++H   +K   E+   + +++ D Y KCG ++ A + F+  S
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D V   SMI++++Q G  E A+ L+ +M       DS   SS L+A ANL A   GK+
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKE 537

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H ++I+  F SDTF  ++L++MY+KCG++  A   F+ +  +  VSW+++I     HG 
Sbjct: 538 MHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGC 597

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +E L ++ +ML  G+ P+H+T + ++ AC HAGLV E  H+F  M +++GI    EHYA
Sbjct: 598 PRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYA 657

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CM+D+ GRAG+  EA + + +MPF  +A VWG LLGA R++ NVE+ + A+  L  ++P+
Sbjct: 658 CMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPK 717

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  +VLLSN++A AG W +V KVR  MK+  ++K PG SWI+V    + F+  D +H  
Sbjct: 718 NSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPE 777

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
           S EIY  L  +   L K GYVP     LH
Sbjct: 778 SVEIYLILKSLLLELRKQGYVPQPYLPLH 806



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 267/495 (53%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           + +AC+    +    QVH  V+  G       ++ ++ +Y  CG F D+  LF  +  R 
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
            + WN +        + + A+ F+ +M+ S + P++++   +I AC G  +  L   +H 
Sbjct: 77  ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +  LG+  D+F+ +AL+ +YA  G + DA  VF ++   D + WN ++ G V     D 
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           A+  F +M++S    N  TYT  L  CA       G QLH  +I    + DP V   LV 
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG++  AR +F+ MP+ + + WN +I+G++QNG   EAA LF  M   GV  D  T
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++ L S+    ++  CK+VH+  V+     D Y+ ++LID Y K G VE A KIF+++ 
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNI 376

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
            VD+  CT+MI+ Y   GL  +A+  +  +    +  +S   +S+L ACA ++A + GK+
Sbjct: 377 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKE 436

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H HI+K    +    G+++ +MYAKCG +D A   F  + DR  V W++MI   +Q+G+
Sbjct: 437 LHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGK 496

Query: 481 GKEALQMFGQMLEDG 495
            + A+ +F QM   G
Sbjct: 497 PEIAIDLFRQMGMSG 511



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 226/480 (47%), Gaps = 4/480 (0%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L S+  AC+ +      R++H   I  G       ++ ++ +Y   G   DA  +F ++E
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73

Query: 159 HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQ 218
               + WN +I G  +    D+AL  + +M  S ++P+ +T+   +KAC G+    L   
Sbjct: 74  LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 133

Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
           +H +   +    D   G  L+ +YA  G + +AR +F  +P ++ I WN+++ G++++G 
Sbjct: 134 VHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGD 193

Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
              A   F  M       +  T + +L   A+        Q+H L + + FE D  + N+
Sbjct: 194 FDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANT 253

Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
           L+  Y KCG++  A K+F      D V    +I  Y Q G  +EA  L+  M    + PD
Sbjct: 254 LVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313

Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
           S   +S L +     +    K+VH +I++     D +  ++L+++Y K G ++ A + F 
Sbjct: 314 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ 373

Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE 518
           +     +   +AMI G   HG   +A+  F  ++++G++ N +T+ SVL AC     +  
Sbjct: 374 QNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKP 433

Query: 519 AKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
            K  H   ++K+  ++ +    + + D+  + G+   A E    M    ++  W +++ +
Sbjct: 434 GKELHCHILKKR--LENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMISS 490


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/651 (34%), Positives = 374/651 (57%), Gaps = 10/651 (1%)

Query: 125 LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKL 184
           L  + + F  N LV  Y +  +++DAVA F +I   +  S+  ++     ++ +  AL+L
Sbjct: 11  LEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQL 70

Query: 185 FQQMKSSEINPNMFTYTSALKACA--GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           F++  + E+  N  TY + LK+CA  G +  E G+++H   I     +D +V   L+ MY
Sbjct: 71  FKKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMY 130

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
           AKCGS   A  +F  M  KNLI++  +I  +      +EA  L+  M  EG+      + 
Sbjct: 131 AKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGI------MP 184

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESS 360
            +    A+       ++  A+ VK         V  N+L+  YG+ G +  A  +F    
Sbjct: 185 DIYAYAAALAVCPTIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIR 244

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             DL +  +MI  +A++  G +A+ LY+EM+ R + P+ +  +S+L+AC+ L A  +GK+
Sbjct: 245 YKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKE 304

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  +      +D     +LVNMYAKCGS  +A   F++   + + +W++++   +Q G+
Sbjct: 305 IHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQ 364

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
            +  L+ + +M  +GV+P+ +T  ++  AC+H+GL  E   +F +M +   I P+Q HY 
Sbjct: 365 SQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYT 424

Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
           CMID+LGR G+ +EA ELV TMP+  +   W  LL A ++Y ++++G  A + +  + P 
Sbjct: 425 CMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPP 484

Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
            S  ++L+ N+YA AG W +VA+V++ +K   L K PG S IE + +++ F  GD +H  
Sbjct: 485 DSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPL 544

Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
           ++EI A+L EV + L+ AGY P  +  L DV E  K +LL  HSE++A+  GL+ +  GA
Sbjct: 545 NQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGA 604

Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T+ + KNLRIC DCH+ F+ +SK++ R+++VRD +RFH F+ GSCSCG YW
Sbjct: 605 TLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 238/478 (49%), Gaps = 22/478 (4%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           + + F+ N LV  Y +C +  D+   F  I E++  S+  +   Y   D  ++A+  FK+
Sbjct: 14  EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73

Query: 87  MVLSGIRPNEFSLSSMINACAGSGDSLL--GRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
            +   ++ N+ +  +++ +CA  G+  L  G++IH ++I  G+ +D+   N+L+ MYAK 
Sbjct: 74  SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC 133

Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
           G+ + A  VF+ +E  +++S+ ++I        +  A +L+++M S  I P+++ Y +AL
Sbjct: 134 GSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL 193

Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
             C    ++E G  +H  L   E ++ P+    LV MY + G +  A+ +F  +  K+L 
Sbjct: 194 AVCP--TIRE-GEAIHVKLGNHERRT-PVCSNALVGMYGRFGRIASAKWVFDGIRYKDLA 249

Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
           ++N +I+   +     +A SL+  M    +  +  T ++VL + +   A+   K++H   
Sbjct: 250 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHK-K 308

Query: 325 VKTAFESDDYIVNS-LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
           VK   +  D   N+ L++ Y KCG   +A  +F +    ++   TS+++AY+Q G  +  
Sbjct: 309 VKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYR 368

Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF-------A 436
           L+ Y  M    + PD    +++ NAC++    ++G      ++ F  M +          
Sbjct: 369 LEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEG------LLYFRAMREDHWIVPLQPH 422

Query: 437 GNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
              ++++  + G + +A+     +P    +V+W+ ++     +G  K   + + ++ E
Sbjct: 423 YTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITE 480



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 25/411 (6%)

Query: 1   VLKACTSKKDLFL--GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
           VLK+C    + +L  G ++H   +  GF +D  V NSL+ MYAKCG+F  +  +F+ +  
Sbjct: 89  VLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEP 148

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
           ++++S+ S+   Y H     EA   +K+M+  GI P+ ++ ++ +  C    +   G  I
Sbjct: 149 KNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIRE---GEAI 205

Query: 119 HGYSIKLGYDSDMFS--ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
           H   +KLG         +NALV MY + G +  A  VF  I + D+ S+N +IA    ++
Sbjct: 206 H---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYD 262

Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
               A+ L+ +M+   + PN++T+TS L AC+ +     G+++H  +   +  +D     
Sbjct: 263 DGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNT 322

Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
            LV+MYAKCGS  EAR +F+    KN+  W  ++S + Q G        +  M  EGV  
Sbjct: 323 ALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIP 382

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV------NSLIDAYGKCGHVE 350
           D  T + +  + +     G+  +   L    A   D +IV        +ID  G+ G + 
Sbjct: 383 DDVTFTAIFNACSH---SGLPDE--GLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLR 437

Query: 351 DAVKIFKE-SSAVDLVACTSMITA---YAQFGLGEEALKLYLEMQDREINP 397
           +A ++ +    + D+V  T +++A   Y    +G  A K   E+   +  P
Sbjct: 438 EAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGP 488


>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/641 (37%), Positives = 371/641 (57%), Gaps = 13/641 (2%)

Query: 137 LVDMYAKVGNLEDAVAVFKDIEH--PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
           L+  YA   NL +A+ +F  I     D +SWN+VI   ++      A+KLF +M      
Sbjct: 94  LLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQR--- 150

Query: 195 PNMFTYTSALKA-CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
            N  ++T+ +    +   + E  R  +       +  D      +V+ Y   G +++A  
Sbjct: 151 -NSISWTTIIHGFLSTGRVNEAERFFNA---MPYVDKDVATWNAMVNGYCNNGRVNDALR 206

Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR-EGVGFDQTTLSTVLKSVASFQ 312
           +F  MP +++I+W  +I G  +NG   +A   F  M    GVG   TTL   L + A   
Sbjct: 207 LFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKIL 266

Query: 313 AIGVCKQVHALSVKTAFES--DDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSM 370
                 Q+H    K  F    D+++  SL+  Y  C  + DA K+F E+   ++V  T++
Sbjct: 267 DFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTAL 326

Query: 371 ITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGF 430
           +T         EAL+++ EM    + P+    +S LN+C  L   E+G+ +H   IK G 
Sbjct: 327 LTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGL 386

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
            +  + GNSLV MY+KCG I DA   F  I ++ +VSW+++I G AQHG G  AL +F +
Sbjct: 387 ENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKE 446

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAG 550
           ML +GV  + ITL  +L AC+ +G++ +A+  F    +K  ++   EHYACM+D+LGR G
Sbjct: 447 MLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCG 506

Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSN 610
           + +EA  L  +MP +AN+ VW  LL A R++ +++V + AA+ +F +EP+ S+ +VLLSN
Sbjct: 507 EVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSN 566

Query: 611 IYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDE 670
           +YAS+  W  VA++R  MK N + K+PG SWI +K   + F   DRSH  ++EIY KL  
Sbjct: 567 LYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVW 626

Query: 671 VSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRI 730
           +   L + GY+P  +  LHDVE  + E++L +HSE+LA+AFGL++T  G+TI + KNLR+
Sbjct: 627 LGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRV 686

Query: 731 CVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           C DCHT+   ++KIV+REI+VRD +RFHHF+NG CSCG YW
Sbjct: 687 CGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 197/396 (49%), Gaps = 16/396 (4%)

Query: 27  DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
           D D    N++V  Y   G   D+ RLF  +P R V+SW S+           +A+ FFK 
Sbjct: 182 DKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKN 241

Query: 87  MV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGY--DSDMFSANALVDMYAK 143
           MV  SG+  +  +L   ++A A   D   G +IH    K G+    D F + +LV  YA 
Sbjct: 242 MVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYAS 301

Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
              + DA  VF +    ++V W A++ GC L++ +  AL++F +M    + PN  ++TSA
Sbjct: 302 CKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSA 361

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
           L +C G+E  E GR +H + IKM +++    G  LV MY+KCG + +A  +F  + EKN+
Sbjct: 362 LNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNV 421

Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA- 322
           ++WN VI G  Q+G    A  LF  M REGV  D+ TL+ +L + +    +   +     
Sbjct: 422 VSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGY 481

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVED----AVKIFKESSAVDLVACTSMITAYAQFG 378
            + K + +        ++D  G+CG VE+    A  +  E++++  +   S    ++   
Sbjct: 482 FARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLD 541

Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
           + E A K   EM+     PD   CS+     +NL A
Sbjct: 542 VAERAAKRIFEME-----PD---CSAAYVLLSNLYA 569



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 198/448 (44%), Gaps = 37/448 (8%)

Query: 48  DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
            +R +F+ IP   V  +  L   Y H + L EA+  F +  +     +  S +S+I A  
Sbjct: 75  SARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQ--IPSNTKDTISWNSVIKASI 132

Query: 108 GSGDSLLGRK----------------IHGYSIKLG--------------YDSDMFSANAL 137
              D +   K                IHG+ +  G               D D+ + NA+
Sbjct: 133 ICNDFVTAVKLFDEMPQRNSISWTTIIHGF-LSTGRVNEAERFFNAMPYVDKDVATWNAM 191

Query: 138 VDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKS-SEINPN 196
           V+ Y   G + DA+ +F  +   D++SW ++I G   +  +  AL  F+ M   S +  +
Sbjct: 192 VNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGIS 251

Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKS--DPIVGVGLVDMYAKCGSMDEARMI 254
             T    L A A +     G Q+HC + K       D  V   LV  YA C  M +A  +
Sbjct: 252 STTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKV 311

Query: 255 FHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAI 314
           F     KN++ W  +++G   N   +EA  +F  M R  V  ++++ ++ L S    + +
Sbjct: 312 FGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDL 371

Query: 315 GVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY 374
              + +HA  +K   E+  Y  NSL+  Y KCG + DA+ +FK     ++V+  S+I   
Sbjct: 372 EKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGC 431

Query: 375 AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
           AQ G G  AL L+ EM    +  D    + LL+AC+     ++ +    +  +   M  T
Sbjct: 432 AQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLT 491

Query: 435 FAGNS-LVNMYAKCGSIDDADRAFSEIP 461
               + +V++  +CG +++A+   + +P
Sbjct: 492 VEHYACMVDVLGRCGEVEEAEALATSMP 519



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 28/245 (11%)

Query: 2   LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
           L +C   +DL  G  +H   +  G ++  +  NSLVVMY+KCG   D+  +F  I E++V
Sbjct: 362 LNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNV 421

Query: 62  VSWNS-LFSCYVH-CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
           VSWNS +  C  H C     A+  FKEM+  G+  +E +L+ +++AC+ SG     R   
Sbjct: 422 VSWNSVIVGCAQHGCG--TWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFF 479

Query: 120 GY-----SIKLGYDSDMFSANALVDMYAKVGNLE--DAVAVFKDIEHPDIVSWNAVIAGC 172
           GY     S+KL  +        +VD+  + G +E  +A+A    +E   +V W  +++ C
Sbjct: 480 GYFARKRSMKLTVE----HYACMVDVLGRCGEVEEAEALATSMPVEANSMV-WLVLLSAC 534

Query: 173 VLHEHNDWALKLFQQMKSSEINPN---MFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
            +H   D A +  +++   E+ P+    +   S L A +        R L  + I+M++K
Sbjct: 535 RVHSSLDVAERAAKRI--FEMEPDCSAAYVLLSNLYASS-------RRWLEVARIRMKMK 585

Query: 230 SDPIV 234
            + IV
Sbjct: 586 HNGIV 590


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/695 (33%), Positives = 391/695 (56%), Gaps = 16/695 (2%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +L+ C SK  +    Q+H   +  G   D FV   L V+YA+  +   + +LF+  P ++
Sbjct: 10  LLETCCSKISI---PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKT 66

Query: 61  VVSWNSLFSCYVHCDFLE----EAVCFFKEMVLSGI---RPNEFSLSSMINACAGSGDSL 113
           V  WN+L   Y    FLE    E +  F +M    I   RP+ +++S  + +C+G     
Sbjct: 67  VYLWNALLRSY----FLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLE 122

Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           LG+ IHG+  K   D+DMF  +AL+++Y+K G + DAV VF +    D+V W ++I G  
Sbjct: 123 LGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYE 182

Query: 174 LHEHNDWALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
            +   + AL  F +M   E ++P+  T  SA  ACA +    LGR +H  + +    +  
Sbjct: 183 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 242

Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
            +   ++++Y K GS+  A  +F  MP K++I+W+ +++ +  NG +  A +LF  M  +
Sbjct: 243 CLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDK 302

Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
            +  ++ T+ + L++ AS   +   K +H L+V   FE D  +  +L+D Y KC   ++A
Sbjct: 303 RIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNA 362

Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
           + +F      D+V+   + + YA+ G+  ++L ++  M      PD+     +L A + L
Sbjct: 363 IDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSEL 422

Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
              +Q   +H  + K GF ++ F G SL+ +YAKC SID+A++ F  +  + +V+WS++I
Sbjct: 423 GIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSII 482

Query: 473 GGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
                HG+G+EAL++F QM     V PN +T VS+L AC+HAGL+ E    F  M  ++ 
Sbjct: 483 AAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQ 542

Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
           + P  EHY  M+D+LGR G+  +A+++++ MP QA   VWGALLGA RI++N+++G+ AA
Sbjct: 543 LMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAA 602

Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
             LF ++P  +  + LLSNIY     W + AK+R  +K+N+ KK  G S +E+K++V++F
Sbjct: 603 LNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSF 662

Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVET 686
              DR H  S +IY  L ++   + + GY P V+T
Sbjct: 663 IASDRFHGESDQIYGMLRKLDARMKEEGYDPPVQT 697


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/534 (41%), Positives = 332/534 (62%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L++ + + G +D A  +F  M E+N+  WN ++SG +Q   +     LF  M+  G   D
Sbjct: 29  LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
           + TL +VL+  A  +A    KQVHA  +K  +E +  + +SL   Y K G + +  K+ K
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
                ++VA  ++I   AQ G  E  L LY  M+   + PD     S++++ A L+   Q
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
           G+Q+H   IK G  S     +SL++MY+KCG ++D+ +A  +      V WS+MI     
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGF 268

Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
           HGRG+EA+ +F QM ++G+  N +T +S+L AC+H GL  +    F+ M +K+G++P  E
Sbjct: 269 HGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLE 328

Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           HY C++D+LGR+G   EA  ++ +MP +A+  +W  LL A RI++N ++    AE +  +
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRL 388

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
            P+ S+T+VLLSNI+ASA  W +V+KVR  M+D  +KKEPG+SW+EVK++V+ F++GD+S
Sbjct: 389 NPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKS 448

Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
           H  S+EI   L E+ + +   GYVP   T  HD +  EKE  L +HSEKLA+AFGL+  P
Sbjct: 449 HPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIP 508

Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           PG+ IRV KNLRIC DCH + + IS I +REIIVRD +RFHHF++G CSCG YW
Sbjct: 509 PGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 190/366 (51%), Gaps = 2/366 (0%)

Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
           ++ S N L++ + + G+L+ A+ VF ++   ++ +WNA+++G +  E N+  L LF++M 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
                P+ FT  S L+ CAG+     G+Q+H  ++K   + + +VG  L  MY K GS+ 
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141

Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
           E   +   M  +N++AWN +I+G+ QNG       L+  M   G+  D+ TL +V+ S A
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201

Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
               +   +Q+HA ++K    S   +++SLI  Y KCG +ED++K   +    D V  +S
Sbjct: 202 ELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSS 261

Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKF 428
           MI AY   G GEEA+ L+ +M+   +  +     SLL AC++    E+G     + + K+
Sbjct: 262 MIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKY 321

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQM 487
           G          +V++  + G +D+A+     +P +  +V W  ++     H     A + 
Sbjct: 322 GLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRT 381

Query: 488 FGQMLE 493
             ++L 
Sbjct: 382 AEEILR 387



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 146/272 (53%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N L+  + + G+   + ++FD + ER+V +WN++ S  +  +F E  +  F+EM   G  
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
           P+EF+L S++  CAG   S  G+++H Y +K GY+ ++   ++L  MY K G+L +   V
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
            K +   ++V+WN +IAG   + H +  L L+  MK S + P+  T  S + + A +   
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
             G+Q+H   IK    S   V   L+ MY+KCG ++++          + + W+ +I+ +
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
             +G   EA  LF  M +EG+G +  T  ++L
Sbjct: 267 GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLL 298



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 150/283 (53%), Gaps = 3/283 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+ C   +  + G QVH  V+  G++ +  V +SL  MY K G+  +  ++  A+  R+
Sbjct: 95  VLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRN 154

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VV+WN+L +        E  +  +  M +SG+RP++ +L S+I++ A       G++IH 
Sbjct: 155 VVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHA 214

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
            +IK G +S +   ++L+ MY+K G LED++    D EHPD V W+++IA    H   + 
Sbjct: 215 EAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEE 274

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLI-KMEIKSDPIVGVGLV 239
           A+ LF+QM+   +  N  T+ S L AC+   LKE G      ++ K  +K        +V
Sbjct: 275 AVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVV 334

Query: 240 DMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISG-HLQNGGDM 280
           D+  + G +DEA  +   MP E +++ W  ++S   +    DM
Sbjct: 335 DLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADM 377



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           N LI+ + + G ++ A+K+F E    ++    +M++   QF   E  L L+ EM +    
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           PD F   S+L  CA L A   GKQVH +++K+G+  +   G+SL +MY K GS+ + ++ 
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
              +  R +V+W+ +I G AQ+G  +  L ++  M   G+ P+ ITLVSV+ +      +
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206

Query: 517 AEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME-LVDTMPFQANASVWGAL 574
            + +  H E++  K G        + +I +  + G  +++M+ L+D      ++ +W ++
Sbjct: 207 FQGQQIHAEAI--KAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCE--HPDSVLWSSM 262

Query: 575 LGAARIYKNVEVGQHAAEML 594
           + A   +   E   H  E +
Sbjct: 263 IAAYGFHGRGEEAVHLFEQM 282



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 4/148 (2%)

Query: 431 MSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQ 490
           M +  + N L+N + + G +D A + F E+ +R + +W+AM+ GL Q    +  L +F +
Sbjct: 20  MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79

Query: 491 MLEDGVLPNHITLVSVLCACNHAGLVAE-AKHHFESMEKKFGIQPMQEHYACMIDILGRA 549
           M E G LP+  TL SVL  C  AGL A  A     +   K+G +      + +  +  ++
Sbjct: 80  MHELGFLPDEFTLGSVLRGC--AGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKS 137

Query: 550 GKFQEAMELVDTMPFQANASVWGALLGA 577
           G   E  +++  M  + N   W  L+  
Sbjct: 138 GSLGEGEKVIKAMRIR-NVVAWNTLIAG 164


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/662 (36%), Positives = 379/662 (57%), Gaps = 4/662 (0%)

Query: 110 GDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI 169
           G+   G+ IH   I+  +  D+   N L+  Y K G L  A  +F  +   + VS N ++
Sbjct: 25  GELCTGKAIHAQMIRAAH-FDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLM 83

Query: 170 AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
           +G      +  AL L   +K+++ + N +  ++AL A A +    +GRQ H   +K  ++
Sbjct: 84  SGYASAGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQ 140

Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
             P V   ++ MY +C  +++A  +F  +   ++ A+N +I+G L  G    +  +   M
Sbjct: 141 EHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSM 200

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
             E   +D  +   VL   AS + + +  QVHA ++K   E + Y+ ++L+D YGKC   
Sbjct: 201 VGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCA 260

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
            DA   F+     ++V+ T+++TAY Q    E+AL+L+L+++   + P+ F  +  LN+C
Sbjct: 261 RDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSC 320

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWS 469
           A L+A + G  +    +K G        N+L+NMY+K GSI DA R F  +P R +VSW+
Sbjct: 321 AGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWN 380

Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKK 529
           ++I G A HG  +EA+ +F  ML   ++P+++T V VL AC   GLV E  ++   M K+
Sbjct: 381 SVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKE 440

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQH 589
            GI+P +EHY CM+ +L RAG+  EA + + +     +   W +LL + ++YKN  +G  
Sbjct: 441 MGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHR 500

Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
            AE +  ++P    T+VLLSN+YA A  WD V KVR+ M++  ++KEPG+SWI+V  +V+
Sbjct: 501 VAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVH 560

Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
            FT  D++H    +I  KL E+   +   GYVP     LHDVE  +KE+ L +HSEK+A+
Sbjct: 561 VFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMAL 620

Query: 710 AFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGG 769
           AFGLI +P G TIR+ KNLRIC DCH + + IS +  R+I+VRD  RFH   +G CSC  
Sbjct: 621 AFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDD 680

Query: 770 YW 771
           YW
Sbjct: 681 YW 682



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 225/441 (51%), Gaps = 5/441 (1%)

Query: 34  NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
           N L+  Y KCG    +R++FDA+P R+ VS N L S Y       +A+   K    S   
Sbjct: 49  NHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALLKAADFS--- 105

Query: 94  PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
            NE+ LS+ ++A A      +GR+ HGY++K G     +  NA++ MY +  ++EDAV V
Sbjct: 106 LNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKV 165

Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELK 213
           F+++   DI ++N++I G +     D ++++ + M       +  +Y + L  CA  +  
Sbjct: 166 FENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKEL 225

Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
            LG Q+H   +K  ++ +  VG  LVDMY KC    +A   F ++PEKN+++W  V++ +
Sbjct: 226 LLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAY 285

Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD 333
            QN    +A  LF  +  EGV  ++ T +  L S A   A+     + A ++KT      
Sbjct: 286 TQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGAL 345

Query: 334 YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR 393
            + N+L++ Y K G + DA ++F      D+V+  S+I  YA  GL  EA+ ++ +M   
Sbjct: 346 SVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLA 405

Query: 394 EINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
           EI P       +L ACA L   ++G   +++ + + G          +V +  + G +D+
Sbjct: 406 EIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDE 465

Query: 453 ADR-AFSEIPDRGIVSWSAMI 472
           A++   S      +V+W +++
Sbjct: 466 AEQFILSNCIGTDVVAWKSLL 486


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/628 (37%), Positives = 365/628 (58%), Gaps = 47/628 (7%)

Query: 145 GNLEDAVAVFKD-IEHPDIVSWNAVIAGCVLHEHNDW--ALKLF--QQMKSSEINPNMFT 199
           GNL  +V +F   +  P+I ++NA++      +HN W   +  F  Q +  +  NP+ +T
Sbjct: 72  GNLRHSVLIFNHFLSFPNIFAYNALLKA--FSQHNAWHTTISYFNNQLVLPNAPNPDEYT 129

Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
           +TS LKACAG+     G+++HC + K   +S+  V   LVD+Y K G    A+ +F  M 
Sbjct: 130 FTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV 189

Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
            +++++WN +ISG+  +G   +A  +F  M                K++ S+        
Sbjct: 190 VRDVVSWNTLISGYCFSGMVDKARMVFDGMME--------------KNLVSW-------- 227

Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
                            +++I  Y + G++E+A ++F+     ++V+  +MI  YAQ   
Sbjct: 228 -----------------STMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEK 270

Query: 380 GEEALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
             +A++L+ +MQ +  + P+     S+L+ACA+L A + GK +H  I +       F GN
Sbjct: 271 YADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGN 330

Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
           +L +MYAKCG + +A   F E+ +R ++SWS +I GLA +G   EA   F +M+EDG+ P
Sbjct: 331 ALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP 390

Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL 558
           N I+ + +L AC HAGLV +   +F+ M + +GI P  EHY C++D+L RAG+  +A  L
Sbjct: 391 NDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESL 450

Query: 559 VDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMW 618
           +++MP Q N  VWGALLG  RIYK+ E G+     +  ++   S + V L+N+YAS G  
Sbjct: 451 INSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRL 510

Query: 619 DNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA 678
           D+ A  R  M+DNK  K PG SWIE+ + VY F +GD SH +S  IY+ + E+   +  A
Sbjct: 511 DDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVA 570

Query: 679 GYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSF 738
           GY P  +  +H+++E EKE  L  HSEKLA+AFGLI T  G TIR+ KNLR+C DCH + 
Sbjct: 571 GYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAI 630

Query: 739 EFISKIVSREIIVRDVNRFHHFRNGSCS 766
           + ISKIV REI+VRD +RFHHF++G CS
Sbjct: 631 KIISKIVEREIVVRDRSRFHHFKDGKCS 658



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 213/439 (48%), Gaps = 44/439 (10%)

Query: 60  SVVSWNSLFSCYVHCDFLEEAVCFFK-EMVL-SGIRPNEFSLSSMINACAGSGDSLLGRK 117
           ++ ++N+L   +   +     + +F  ++VL +   P+E++ +S++ ACAG    L G+K
Sbjct: 89  NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148

Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
           +H +  K G +S++F  N+LVD+Y KVG    A  +F ++   D+VSWN +I+G      
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208

Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
            D A  +F  M    +  N+ ++++                                   
Sbjct: 209 VDKARMVFDGM----MEKNLVSWST----------------------------------- 229

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GVGF 296
           ++  YA+ G+++EAR +F  MP +N+++WN +I+G+ QN    +A  LF  M  E G+  
Sbjct: 230 MISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAP 289

Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
           +  TL +VL + A   A+ + K +H    +   E   ++ N+L D Y KCG V +A  +F
Sbjct: 290 NDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVF 349

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
            E    D+++ + +I   A +G   EA   + EM +  + P+      LL AC +    +
Sbjct: 350 HEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVD 409

Query: 417 QGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
           +G +    + + +G          +V++ ++ G +D A+   + +P    ++ W A++GG
Sbjct: 410 KGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 469

Query: 475 LAQHGRGKEALQMFGQMLE 493
              +   +   ++  ++LE
Sbjct: 470 CRIYKDAERGERVVWRILE 488



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 212/462 (45%), Gaps = 90/462 (19%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VLKAC     +  G +VH  V   G +S+ FV NSLV +Y K G    +++LFD +  R 
Sbjct: 133 VLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRD 192

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           VVSWN+L S Y     +++A   F  M    +  N  S S+MI+                
Sbjct: 193 VVSWNTLISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISG--------------- 233

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
                               YA+VGNLE+A  +F+++   ++VSWNA+IAG   +E    
Sbjct: 234 --------------------YARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYAD 273

Query: 181 ALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
           A++LF+QM+    + PN  T  S L ACA +   +LG+ +H  + + +I+    +G  L 
Sbjct: 274 AIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALA 333

Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
           DMYAKCG + EA+ +FH M E+++I+W+I+I G    G   EA + F  M  +G+  +  
Sbjct: 334 DMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDI 393

Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDD-----YIVNSLIDAYGKCGHVEDAVK 354
           +   +L +             HA  V    E  D     Y +   I+ YG          
Sbjct: 394 SFMGLLTAC-----------THAGLVDKGLEYFDMMPQVYGITPKIEHYG---------- 432

Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
                  VDL+         ++ G  ++A  L   M    + P+  V  +LL  C     
Sbjct: 433 -----CVVDLL---------SRAGRLDQAESLINSMP---MQPNVIVWGALLGGCRIYKD 475

Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLV---NMYAKCGSIDDA 453
            E+G++V   I++     D+    SLV   N+YA  G +DDA
Sbjct: 476 AERGERVVWRILEL----DSNHSGSLVYLANVYASMGRLDDA 513


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/668 (33%), Positives = 382/668 (57%), Gaps = 3/668 (0%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
           +LK C   K L  G  +H  +V  G  ++  +  SL+ +Y  C  F  ++ +F  I    
Sbjct: 9   LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68

Query: 60  SVVSWNSLFS-CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +  WN L + C  +  F+E    F + +    ++P+ F+  S++ AC+G G    G+ +
Sbjct: 69  DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
           H + IK G+  D+   ++ V MYAK    EDA+ +F ++   D+ SWN VI+        
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188

Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
           + AL+LF++MK S   P+  T T+ + +CA +   E G+++H  L++     D  V   L
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248

Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
           VDMY KCG ++ A+ +F  +  KN+++WN +I+G+   G       LF  M  EG+    
Sbjct: 249 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 308

Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
           TTLS++L + +    + + K +H   ++   E+D ++ +SLID Y KCG++  A  +F+ 
Sbjct: 309 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 368

Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
               ++V+   MI+ Y + G   EAL ++ +M+   + PD+   +S+L AC+ L+  E+G
Sbjct: 369 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 428

Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
           K++H  II+     +     +L++MYAKCG++D+A   F+++P+R  VSW++MI     H
Sbjct: 429 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 488

Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
           G+  EAL++F +M +    P+ +T +++L AC+HAGLV E  ++F  M  ++G +P  EH
Sbjct: 489 GQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEH 548

Query: 539 YACMIDILGRAGKFQEAMELVDTMP-FQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
           Y+C+ID+LGR G+ +EA E++   P  + +  +   L  A  ++K +++G+    +L   
Sbjct: 549 YSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEK 608

Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
           +P+  ST+++LSN+YAS   WD V KVR  +K+  LKK PG SWIEV  +++ F V D+S
Sbjct: 609 DPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKS 668

Query: 658 HARSKEIY 665
           H ++  IY
Sbjct: 669 HPQADMIY 676



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/483 (31%), Positives = 258/483 (53%), Gaps = 8/483 (1%)

Query: 99  LSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE 158
           L S++  C  S     G+ IH   + LG  +++    +L+++Y      + A  VF+ IE
Sbjct: 6   LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65

Query: 159 HP-DIVSWNAVIAGCVLHEHNDWALKLFQQ-MKSSEINPNMFTYTSALKACAGMELKELG 216
           +P DI  WN ++A C  +      L++F + +    + P+ FTY S LKAC+G+     G
Sbjct: 66  NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125

Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
           + +H  +IK     D +V    V MYAKC   ++A  +F  MPE+++ +WN VIS + Q+
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185

Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
           G   +A  LF  M   G   D  TL+TV+ S A    +   K++H   V++ F  D ++ 
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245

Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
           ++L+D YGKCG +E A ++F++    ++V+  SMI  Y+  G  +  ++L+  M +  I 
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305

Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
           P     SS+L AC+     + GK +H +II+    +D F  +SL+++Y KCG+I  A+  
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365

Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
           F  +P   +VSW+ MI G  + G   EAL +F  M + GV P+ IT  SVL AC+   ++
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425

Query: 517 AEAK--HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
            + K  H+F  +E K  I  +      ++D+  + G   EA+ + + +P +   S W ++
Sbjct: 426 EKGKEIHNF-IIESKLEINEVV--MGALLDMYAKCGAVDEALHIFNQLPERDFVS-WTSM 481

Query: 575 LGA 577
           + A
Sbjct: 482 IAA 484


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/536 (40%), Positives = 334/536 (62%), Gaps = 10/536 (1%)

Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
           L+  +  CG +D A  +F  MP +++ +WN ++SG  +NG   EA ++F    R     +
Sbjct: 78  LLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMF----RAMPARN 133

Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIF 356
             + + ++ + AS   +G  + +     + A E  D I+  +++  Y   G+V+ A++ F
Sbjct: 134 AVSWNAMVAARASSGDMGAAENL----FRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYF 189

Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREINPDSFVCSSLLNACANLSAY 415
           +     +LV+  +++  Y +     +AL+++  M +D  + P+    SS+L  C+NLSA 
Sbjct: 190 RAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSAL 249

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
             G+QVH   +K         G SL++MY KCG +DDA + F E+  + IV+W+AMI G 
Sbjct: 250 GFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGY 309

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           AQHG G++A+++F +M ++GV+P+ ITL++VL AC H GL       FE+M++ + I+P 
Sbjct: 310 AQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQ 369

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLF 595
            +HY+CM+D+L RAG  + A+ ++ +MPF+ + S +G LL A R+YKN+E  + AA  L 
Sbjct: 370 VDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLI 429

Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGD 655
             +P+ +  +V L+NIYA A  WD+V++VRR+MKDN + K PG SW+E+K   + F   D
Sbjct: 430 EQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSND 489

Query: 656 RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
           R H +   I+ KLD +  L+   GY P ++  LHDVEES K Q+L  HSEKLA+AFGLI+
Sbjct: 490 RLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLIS 549

Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
           T PG T+R+ KNLRIC DCH + + ISKI  REII+RD  RFHHFR G CSCG YW
Sbjct: 550 TSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 204/464 (43%), Gaps = 68/464 (14%)

Query: 34  NSLVVMYAKC---GNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM--- 87
           N L+  YAK    G   D+RRLFD+IP    VS+N+L SC+  C  ++ A   F  M   
Sbjct: 42  NCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVR 101

Query: 88  -------VLSGIRP-----------------NEFSLSSMINACAGSGDSLLGRKIHGYSI 123
                  ++SG+                   N  S ++M+ A A SGD      +   + 
Sbjct: 102 DVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAP 161

Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
           +    +D     A+V  Y   GN++ A+  F+ +   ++VSWNAV+AG V +     AL+
Sbjct: 162 E---KTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALR 218

Query: 184 LFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
           +F+ M + + + PN  T +S L  C+ +     GRQ+H   +K+ +     VG  L+ MY
Sbjct: 219 VFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMY 278

Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
            KCG +D+A  +F  M  K+++AWN +ISG+ Q+GG  +A  LF  M  EGV  D  TL 
Sbjct: 279 CKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLL 338

Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
            VL +                           I   L D   +C   E   + +     V
Sbjct: 339 AVLTAC--------------------------IHTGLCDFGIQC--FETMQEAYNIEPQV 370

Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
           D  +C  M+    + GL E A+ +   M   E +P ++   +LL AC      E  +   
Sbjct: 371 DHYSC--MVDLLCRAGLLERAVNMIHSMP-FEPHPSAY--GTLLTACRVYKNLEFAEFAA 425

Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
             +I+     +  A   L N+YA     DD  R    + D  +V
Sbjct: 426 RKLIEQD-PQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVV 468



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 4/235 (1%)

Query: 28  SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEM 87
           +D  +  ++V  Y   GN   +   F A+P R++VSWN++ + YV      +A+  FK M
Sbjct: 164 TDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTM 223

Query: 88  VLSGI-RPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
           V   I +PN  +LSS++  C+       GR++H + +KL     +    +L+ MY K G+
Sbjct: 224 VEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGD 283

Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
           L+DA  +F ++   DIV+WNA+I+G   H     A+KLF++MK   + P+  T  + L A
Sbjct: 284 LDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTA 343

Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP 259
           C    L + G Q     ++     +P V     +VD+  + G ++ A  + H MP
Sbjct: 344 CIHTGLCDFGIQCF-ETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMP 397



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 57/310 (18%)

Query: 295 GFDQTTLSTVLKSVASF--------QAIGVCKQVHALSVKTAFESDDYI-VNSLIDAYGK 345
           G ++   ST LK+  ++        +A G  +   A  +  +    D +  N+L+  +  
Sbjct: 25  GAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFA 84

Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVC-- 402
           CG ++ A ++F      D+ +  +M++  ++ G  EEA  ++  M  R  ++ ++ V   
Sbjct: 85  CGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAAR 144

Query: 403 --SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
             S  + A  NL      K            +D     ++V+ Y   G++  A   F  +
Sbjct: 145 ASSGDMGAAENLFRNAPEK------------TDAILWTAMVSGYMDTGNVQKAMEYFRAM 192

Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL-PNHITLVSVLCACNHAGLVAEA 519
           P R +VSW+A++ G  ++ R  +AL++F  M+ED ++ PN  TL SVL  C++   +   
Sbjct: 193 PVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALG-- 250

Query: 520 KHHFESMEKKFGIQPMQEHYACMIDILGRA--------------GKFQEAMELVDTMPFQ 565
                     FG    Q H  CM   LGR+              G   +A +L D M   
Sbjct: 251 ----------FG---RQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEM-HT 296

Query: 566 ANASVWGALL 575
            +   W A++
Sbjct: 297 KDIVAWNAMI 306



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 13/156 (8%)

Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
           D  + N+L++ +  CG ID A R FS +P R + SW+ M+ GL+++G  +EA  MF  M 
Sbjct: 71  DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130

Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGK 551
                 N ++  +++ A   +G +  A++ F +  EK   I      +  M+      G 
Sbjct: 131 AR----NAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAIL-----WTAMVSGYMDTGN 181

Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVG 587
            Q+AME    MP + N   W A++  A   KN   G
Sbjct: 182 VQKAMEYFRAMPVR-NLVSWNAVV--AGYVKNSRAG 214


>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/772 (32%), Positives = 428/772 (55%), Gaps = 35/772 (4%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL ACT+ +    G Q H  ++  GFDS  ++ NSL+  YAKCG+    RR+F  + E++
Sbjct: 169 VLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKN 228

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +VSWN+  + YVH     EA+  F+ ++    + ++FSL S++ A +G G    G++IHG
Sbjct: 229 LVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHG 288

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y ++ G +++ +  ++L+DMY  +G + D  +++  +E P                    
Sbjct: 289 YILRAGIETNRYVVSSLLDMY--IGCI-DHESLYPRVEVP-------------------- 325

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
            LKL   ++    +   F  TS LK C+     E G+  H  +IK+++KSD  V   L+D
Sbjct: 326 -LKLLNYLEGGGYDE--FIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLID 382

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY+KCG  + A+ +F  + + +   W+ +ISGH  NG   EA  LF  M  +G+  ++ T
Sbjct: 383 MYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFT 442

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
            ++V+ +  + + +   K++H   +++ +ES+  +VN+LI+ Y +    + A+K+     
Sbjct: 443 FTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIP 502

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             + ++   +I A       E   KL   +Q    N D      +  +C++      G Q
Sbjct: 503 DSE-ISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQ 561

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
            H ++ K G +S     NSL+ MY+ CG  D+A +AF+ +P++   SW++++    +HG 
Sbjct: 562 AHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGH 621

Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
             EAL +  QM       +  T  SVL AC   GLV EA   F SM++ +GI+P++EHY+
Sbjct: 622 PSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYS 681

Query: 541 CMIDILGRAGKFQEAMELVDTMP-FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
           CM+++LGRAG F+E ++ ++ +P F+    +W  LL ++RI+ N++V Q+AAE L  +EP
Sbjct: 682 CMVEVLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEP 741

Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
              S ++LL  +  + G WDN  K++   K  +       SWIE+++++Y F   +    
Sbjct: 742 SDFSANLLLEQVLLTLGEWDNALKLKTKTKSMRASS----SWIEIRNRIYEFASDENP-- 795

Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
            +KE+ AKL E+   + + GYV      LH+ EE E + +  HH+E  A+AFGLI+ P G
Sbjct: 796 -AKEVSAKLAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLISLPHG 854

Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
             +RV KN+R+C DCH++ +F+S  + RE++V+D   FHHFR+G CSC   W
Sbjct: 855 MPVRVVKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGKCSCRDTW 906



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/478 (33%), Positives = 246/478 (51%), Gaps = 34/478 (7%)

Query: 39  MYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG----IRP 94
           MY   G   ++R+LFD +PERS+VSW  + S Y       E +  F +M+       +RP
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 95  NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
           + F  + ++ AC        GR +HG  +K     D F  NALV MY   G LEDA  VF
Sbjct: 61  DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVF 120

Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE 214
             I+ PD+V W+++++G V +   +  L++F  M S  I P+ F ++  L AC  +E  +
Sbjct: 121 GGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWD 180

Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
            G Q HC +IKM   S   +   L+D YAKCG ++  R +F  M EKNL++WN  I+G++
Sbjct: 181 FGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYV 240

Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
            N   +EA  +F  +  E    D  +L ++LK+V+    +   K++H   ++   E++ Y
Sbjct: 241 HNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRY 300

Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL--YLEMQD 392
           +V+SL+D Y                     + C    + Y +    E  LKL  YLE   
Sbjct: 301 VVSSLLDMY---------------------IGCIDHESLYPRV---EVPLKLLNYLEGGG 336

Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
                D F+ +SLL  C+  S+ E GK  H  IIK    SD++  +SL++MY+KCG  + 
Sbjct: 337 Y----DEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEA 392

Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           A R F+ +       WSA+I G + +G   EAL++F +M  DG+  N  T  SV+ AC
Sbjct: 393 AKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILAC 450



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 186/641 (29%), Positives = 311/641 (48%), Gaps = 50/641 (7%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL+AC   + L  G  VHG+VV      D FV N+LV MY  CG   D+  +F  I +  
Sbjct: 68  VLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPD 127

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
           +V W+S+ S YV     EE +  F +MV  GI P+ F+ S ++ AC        G + H 
Sbjct: 128 LVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHC 187

Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
           Y IK+G+DS ++  N+L+D YAK G+LE    VF  +   ++VSWN  I G V + H   
Sbjct: 188 YIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLE 247

Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
           AL++FQ +       + F+  S LKA +G+   + G+++H  +++  I+++  V   L+D
Sbjct: 248 ALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLD 307

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
           MY  C   +       L P        + +   L N             Y EG G+D+  
Sbjct: 308 MYIGCIDHES------LYPR-------VEVPLKLLN-------------YLEGGGYDEFI 341

Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
           ++++LK  +   ++   K  H+L +K   +SD Y+++SLID Y KCG  E A ++F    
Sbjct: 342 MTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVE 401

Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
             D    +++I+ ++  G   EALKL+ +MQ   I  + F  +S++ AC  L    +GK+
Sbjct: 402 QPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKE 461

Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
           +H  I++ G+ S+    N+L+N+Y++      A +  S IPD  I SW+ +I        
Sbjct: 462 LHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEI-SWNFLIRACL---- 516

Query: 481 GKEALQMFGQML-----EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
           G E  ++  ++L       G L + ++   +  +C+   L+         M K+ G+   
Sbjct: 517 GAEDYEIIHKLLWRIQVSHGNL-DPVSACDIFASCSSPVLLNVGTQAHAYMTKR-GLISH 574

Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA----- 590
                 +I +    GKF EA++  + MP + +   W ++L A      VE G  +     
Sbjct: 575 PTISNSLIQMYSACGKFDEAVQAFNLMP-EKDTCSWTSILSA-----RVEHGHPSEALNL 628

Query: 591 -AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
            ++M +  +P   ST   + N  A  G+ D   ++   MK+
Sbjct: 629 ISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKE 669



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 209/398 (52%), Gaps = 16/398 (4%)

Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG----- 295
           MY   G+M EAR +F  MPE++L++W IV+SG+ ++G   E   +F W    G G     
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMF-WDMLCGSGGGLLR 59

Query: 296 FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
            D    + VL++    + +   + VH L VK +   D ++ N+L+  YG CG +EDA  +
Sbjct: 60  PDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVV 119

Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
           F      DLV  +S+++ Y + GL EE L+++ +M    I PD+F  S +L AC NL  +
Sbjct: 120 FGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECW 179

Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
           + G Q H +IIK GF S  +  NSL++ YAKCG ++   R FS + ++ +VSW+  I G 
Sbjct: 180 DFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGY 239

Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK------K 529
             +    EAL++F  ++E+    +  +L+S+L A +  G +   K     + +      +
Sbjct: 240 VHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNR 299

Query: 530 FGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA-NASVWGALLGAARIYKNVEVGQ 588
           + +  + + Y   ID      + +  ++L++ +     +  +  +LL    +  ++E G+
Sbjct: 300 YVVSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLESGK 359

Query: 589 HAAEMLFAIEPEKSSTHVL--LSNIYASAGMWDNVAKV 624
               ++  ++  KS ++VL  L ++Y+  G+W+   +V
Sbjct: 360 MFHSLIIKLDL-KSDSYVLSSLIDMYSKCGIWEAAKRV 396


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/601 (40%), Positives = 348/601 (57%), Gaps = 36/601 (5%)

Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYA--KCGSMDEARMIFHLMPEK 261
           L+ C+ ME  EL RQ+H  ++K  +  D I    L+   A    GS+  AR +F  +   
Sbjct: 25  LQRCSNME--EL-RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81

Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
           N   WN +I G+  +    EA  L+  M    V  +  T   +LK+ +S  A+   +Q+H
Sbjct: 82  NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIH 141

Query: 322 ALSVKTAFESDDYIVNSL-------------------------------IDAYGKCGHVE 350
           A  +K  F S+ Y  NSL                               ID Y KCG +E
Sbjct: 142 AHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIE 201

Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
            A +IF      ++++ TSMI+     G  +EAL L+  MQ   I  D+    S L ACA
Sbjct: 202 MAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACA 261

Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
           +L   +QGK +H +I K     D   G  L++MYAKCG +++A   F ++ ++G+  W+A
Sbjct: 262 DLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTA 321

Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
           MI G A HGRG+EAL+ F +M   GV PN +T   +L AC+HAGLV EAK  FESME+  
Sbjct: 322 MISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH 381

Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
           G +P  EHY CM+D+LGRAG  +EA EL++ MP + NA++WGALL A  I+ N+E+G+  
Sbjct: 382 GFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441

Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
            ++L  ++P     ++ L++I+A+AG W+  A+VRR MK+  + K PG S I V    + 
Sbjct: 442 GKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHE 501

Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
           F  GD SH + KEI   L+++ + L + GY P +   L D+E+ EKE  ++HHSEKLAV 
Sbjct: 502 FLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVT 561

Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
           FGLI+T PG TIR+ KNLR+C DCHT  + ISK+ +REI++RD  RFH F++G+C+CG Y
Sbjct: 562 FGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDY 621

Query: 771 W 771
           W
Sbjct: 622 W 622



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 240/501 (47%), Gaps = 76/501 (15%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
           +L+ C++ ++L    Q+HG ++ TG   DE  A+ L+   A    G+   +R +FD I  
Sbjct: 24  LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80

Query: 59  RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
            +   WN++   Y +    EEA+  +  M+   +  N ++   ++ AC+        ++I
Sbjct: 81  PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140

Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVI--------- 169
           H + IK+G+ S++++ N+L+++Y+K G+++ A  +F  ++  D VSWN++I         
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200

Query: 170 ----------------------AGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKAC 207
                                 +GCV       AL LF +M+++ I  +     S L+AC
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260

Query: 208 AGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
           A + + + G+ +H  + K EI+ DPI+G  L+DMYAKCG ++EA  +F  M EK +  W 
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
            +ISG+  +G   EA   F  M   GV  +Q T + +L + +          VH    K 
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH------AGLVH--EAKL 372

Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
            FES + I       +G           FK S  ++   C  M+    + GL +EA +L 
Sbjct: 373 LFESMERI-------HG-----------FKPS--IEHYGC--MVDLLGRAGLLKEAEEL- 409

Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS---LVNMY 444
             +++  + P++ +  +LLNAC      E GKQ+   +I+     D   G     L +++
Sbjct: 410 --IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQV----DPGHGGRYIHLASIH 463

Query: 445 AKCGSIDDADRAFSEIPDRGI 465
           A  G  + A R   ++ ++G+
Sbjct: 464 AAAGEWNQAARVRRQMKEQGV 484



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 186/399 (46%), Gaps = 35/399 (8%)

Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
           R+IHG  +K G   D   A+ L+   A    G+L  A  VF  I  P+   WN +I G  
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM------- 226
             +  + AL L+  M    +  N +T+   LKAC+ M   E  +Q+H  +IKM       
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIY 154

Query: 227 -------------EIKS-----------DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKN 262
                        +IKS           D +    ++D Y KCG ++ A  IF+ MPE+N
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214

Query: 263 LIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHA 322
           +I+W  +ISG +  G   EA +LF  M   G+  D   L + L++ A    +   K +HA
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHA 274

Query: 323 LSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
              K   E D  +   LID Y KCG +E+A+++F++     +   T+MI+ YA  G G E
Sbjct: 275 YIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334

Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAGNSLV 441
           AL+ +++MQ   + P+    + +L AC++     + K +   + +  GF         +V
Sbjct: 335 ALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMV 394

Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHG 479
           ++  + G + +A+     +P +   + W A++     HG
Sbjct: 395 DLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/561 (40%), Positives = 322/561 (57%), Gaps = 35/561 (6%)

Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
           YA  G +D +  +F      ++  W  +I GH   G   +A + +  M  +GV  +  T 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
           S++LK       I   K +H+ +VK  F+SD Y+   L+D Y + G V  A ++F     
Sbjct: 79  SSILK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 362 VDLVACTSMITAYA-------------------------------QFGLGEEALKLYLEM 390
             LV+ T+M+T YA                               Q G+  EAL L+  M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
              +  P+     S+L+AC  L A E G+ VH +I   G   +   G +LV+MY+KCGS+
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
           +DA   F +I D+ +V+W++MI G A  G  +EALQ+F  M   G+ P +IT + +L AC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
            H+G V E    F  M+ ++GI+P  EHY CM+++LGRAG  ++A ELV  M  + +  +
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374

Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
           WG LLGA R++  + +G+   E+L       S T++LLSNIYA+ G WD VA++R  MKD
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434

Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
           + +KKEPG S IEV +KV+ F  G  +H + KEIY  L+E++  L   GY P  +  LHD
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494

Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
           + E+EKE+ L  HSEKLA+AFGLI T PG TI++ KNLR+C DCH   + ISKI  R+I+
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554

Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
           VRD NRFHHF NGSCSCG YW
Sbjct: 555 VRDRNRFHHFVNGSCSCGDYW 575



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 177/381 (46%), Gaps = 53/381 (13%)

Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
           YA +G L+ +VA+F   ++P +  W A+I G  L   ++ AL  + QM +  + PN FT+
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
           +S LK C      E G+ LH   +K+   SD  V  GL+D+YA+ G +  A+ +F  MPE
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 261 KNLIA-------------------------------WNIVISGHLQNGGDMEAASLFPWM 289
           K+L++                               WN++I G+ QNG   EA  LF  M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
            +     ++ T+ +VL +     A+   + VH+       + + ++  +L+D Y KCG +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
           EDA  +F +    D+VA  SMI  YA  G  +EAL+L+  M    ++P +     +L+AC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 410 ANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-------LVNMYAKCGSIDDADRAFSEI-- 460
            +     +G  +      F  M D +           +VN+  + G ++ A      +  
Sbjct: 315 GHSGWVTEGWDI------FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNI 368

Query: 461 -PDRGIVSWSAMIGGLAQHGR 480
            PD   V W  ++G    HG+
Sbjct: 369 EPDP--VLWGTLLGACRLHGK 387



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 206/457 (45%), Gaps = 69/457 (15%)

Query: 40  YAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSL 99
           YA  G    S  LF      SV  W ++   +      E+A+ F+ +M+  G+ PN F+ 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA----------------- 142
           SS++  C        G+ +H  ++KLG+DSD++    L+D+YA                 
Sbjct: 79  SSILKLCPIEP----GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 143 --------------KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM 188
                         K G L+ A  +F  +E  D V WN +I G   +   + AL LF++M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
             ++  PN  T  S L AC  +   E GR +H  +    I+ +  VG  LVDMY+KCGS+
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
           ++AR++F  + +K+++AWN +I G+   G   EA  LF  M R G+     T   +L + 
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACT 368
                       H+  V   ++    I N + D YG    +E  ++ +          C 
Sbjct: 315 G-----------HSGWVTEGWD----IFNKMKDEYG----IEPKIEHY---------GC- 345

Query: 369 SMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF 428
            M+    + G  E+A +L   +++  I PD  +  +LL AC        G+++ V ++  
Sbjct: 346 -MVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWGTLLGACRLHGKIALGEKI-VELLVD 400

Query: 429 GFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
             ++++     L N+YA  G+ D   R  + + D G+
Sbjct: 401 QNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGV 437



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 35/239 (14%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           +LK C  +     G  +H   V  GFDSD +V   L+ +YA+ G+ + +++LFD +PE+S
Sbjct: 81  ILKLCPIEP----GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 136

Query: 61  VVSWNSLFSCY----------VHCDFLE---------------------EAVCFFKEMVL 89
           +VS  ++ +CY          V  D +E                     EA+  F+ M+ 
Sbjct: 137 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 196

Query: 90  SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
           +  +PNE ++ S+++AC   G    GR +H Y    G   ++    ALVDMY+K G+LED
Sbjct: 197 AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLED 256

Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
           A  VF  I+  D+V+WN++I G  +   +  AL+LF+ M    ++P   T+   L AC 
Sbjct: 257 ARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACG 315



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 36/258 (13%)

Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
           ++ L  +Y   G ++ +V +F  +    +   T++I  +A  GL E+AL  Y +M  + +
Sbjct: 12  LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71

Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
            P++F  SS+L  C      E GK +H   +K GF SD +    L+++YA+ G +  A +
Sbjct: 72  EPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127

Query: 456 AFSEIPDRGIVS-------------------------------WSAMIGGLAQHGRGKEA 484
            F  +P++ +VS                               W+ MI G  Q+G   EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187

Query: 485 LQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMID 544
           L +F +ML+    PN +T++SVL AC   G + E+     S  +  GIQ        ++D
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGAL-ESGRWVHSYIENNGIQFNVHVGTALVD 246

Query: 545 ILGRAGKFQEAMELVDTM 562
           +  + G  ++A  + D +
Sbjct: 247 MYSKCGSLEDARLVFDKI 264



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 1   VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
           VL AC     L  G  VH  +   G   +  V  +LV MY+KCG+  D+R +FD I ++ 
Sbjct: 209 VLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKD 268

Query: 61  VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
           VV+WNS+   Y    F +EA+  FK M   G+ P   +   +++AC  SG    G  I +
Sbjct: 269 VVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 328

Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
               + G +  +     +V++  + G++E A  + K++   PD V W  ++  C LH
Sbjct: 329 KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 385


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.135    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,781,135,826
Number of Sequences: 23463169
Number of extensions: 481235804
Number of successful extensions: 1332211
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9295
Number of HSP's successfully gapped in prelim test: 2741
Number of HSP's that attempted gapping in prelim test: 1084072
Number of HSP's gapped (non-prelim): 73376
length of query: 771
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 620
effective length of database: 8,816,256,848
effective search space: 5466079245760
effective search space used: 5466079245760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)