BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046775
(771 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 617 bits (1590), Expect = e-175, Method: Compositional matrix adjust.
Identities = 301/771 (39%), Positives = 476/771 (61%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VL AC + L +G Q+HG+V+ GF SD +V N+LV +Y GN I + +F + +R
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
V++N+L + C + E+A+ FK M L G+ P+ +L+S++ AC+ G G+++H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
Y+ KLG+ S+ AL+++YAK ++E A+ F + E ++V WN ++ L +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
+ ++F+QM+ EI PN +TY S LK C + ELG Q+H +IK + + V L+D
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAK G +D A I K++++W +I+G+ Q D +A + F M G+ D+
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
L+ + + A QA+ +Q+HA + + F SD N+L+ Y +CG +E++ F+++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
A D +A ++++ + Q G EEAL++++ M I+ ++F S + A + + +QGKQ
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
VH I K G+ S+T N+L++MYAKCGSI DA++ F E+ + VSW+A+I ++HG
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
G EAL F QM+ V PNH+TLV VL AC+H GLV + +FESM ++G+ P EHY
Sbjct: 774 GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
C++D+L RAG A E + MP + +A VW LL A ++KN+E+G+ AA L +EPE
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
S+T+VLLSN+YA + WD R+ MK+ +KKEPG SWIEVK+ +++F VGD++H
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
+ EI+ +++ ++ GYV + L++++ +K+ +++ HSEKLA++FGL++ P
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013
Query: 721 TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
I V KNLR+C DCH +F+SK+ +REIIVRD RFHHF G+CSC YW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 260 bits (664), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 283/575 (49%), Gaps = 7/575 (1%)
Query: 14 GLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVH 73
G ++H ++ G DS+ ++ L Y G+ + ++FD +PER++ +WN +
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 74 CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMF 132
+ + E F MV + PNE + S ++ AC G + + +IH + G
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
N L+D+Y++ G ++ A VF + D SW A+I+G +E A++LF M
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEAR 252
I P + ++S L AC +E E+G QLH ++K+ SD V LV +Y G++ A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 253 MIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
IF M +++ + +N +I+G Q G +A LF M+ +G+ D TL++++ + ++
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
+ +Q+HA + K F S++ I +L++ Y KC +E A+ F E+ ++V M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
AY + +++ +MQ EI P+ + S+L C L E G+Q+H IIK F
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
+ + + L++MYAK G +D A + +VSW+ MI G Q+ +AL F QML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQ-PMQEHYACMIDILGRAG 550
+ G+ + + L + + AC + E + H ++ F P Q ++ + R G
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCG 640
Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
K +E+ + N + W AL+ + N E
Sbjct: 641 KIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 674
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 237/474 (50%), Gaps = 9/474 (1%)
Query: 91 GIRPNEFSLSSMINACAGSGDSL-LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
GIRPN +L ++ C + SL GRK+H +KLG DS+ + L D Y G+L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
A VF ++ I +WN +I LF +M S + PN T++ L+AC G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 210 MELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
+ ++ Q+H ++ ++ +V L+D+Y++ G +D AR +F + K+ +W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
+ISG +N + EA LF MY G+ S+VL + +++ + +Q+H L +K
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
F SD Y+ N+L+ Y G++ A IF S D V ++I +Q G GE+A++L+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
M + PDS +SL+ AC+ +G+Q+H + K GF S+ +L+N+YAKC
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
I+ A F E +V W+ M+ + + ++F QM + ++PN T S+L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 509 ACNHAG-LVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILGRAGKFQEAMELV 559
C G L + H + ++ F + Y C +ID+ + GK A +++
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 548
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 390 MQDREINPDSFVCSSLLNACANLS-AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
+++R I P+ LL C + + ++G+++H I+K G S+ L + Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
+ A + F E+P+R I +W+ MI LA E +F +M+ + V PN T VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
AC + + + G++ +ID+ R G A + D + + ++
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 569 SVWGALL 575
S W A++
Sbjct: 255 S-WVAMI 260
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 600 bits (1547), Expect = e-170, Method: Compositional matrix adjust.
Identities = 311/789 (39%), Positives = 476/789 (60%), Gaps = 19/789 (2%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEF-VANSLVVMYAKCGNFIDSRRLFDAIPER 59
+LKA +D+ LG Q+H V G+ D VAN+LV +Y KCG+F ++FD I ER
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG---SGDSLLGR 116
+ VSWNSL S + E A+ F+ M+ + P+ F+L S++ AC+ ++G+
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
++H Y ++ G + + F N LV MY K+G L + + D+V+WN V++ +E
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVG 235
AL+ ++M + P+ FT +S L AC+ +E+ G++LH +K + + VG
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 236 VGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE-GV 294
LVDMY C + R +F M ++ + WN +I+G+ QN D EA LF M G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
+ TT++ V+ + A + +H VK + D ++ N+L+D Y + G ++ A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-----------INPDSFVCS 403
IF + DLV +MIT Y E+AL L +MQ+ E + P+S
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
++L +CA LSA +GK++H + IK +D G++LV+MYAKCG + + + F +IP +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
+++W+ +I HG G+EA+ + M+ GV PN +T +SV AC+H+G+V E F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN-ASVWGALLGAARIYK 582
M+ +G++P +HYAC++D+LGRAG+ +EA +L++ MP N A W +LLGA+RI+
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 583 NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWI 642
N+E+G+ AA+ L +EP +S +VLL+NIY+SAG+WD +VRR MK+ ++KEPG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 643 EVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYH 702
E D+V+ F GD SH +S+++ L+ + + + K GYVP LH+VEE EKE LL
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821
Query: 703 HSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRN 762
HSEKLA+AFG++ T PG IRV KNLR+C DCH + +FISKIV REII+RDV RFH F+N
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 763 GSCSCGGYW 771
G+CSCG YW
Sbjct: 882 GTCSCGDYW 890
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 315/645 (48%), Gaps = 40/645 (6%)
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
RS W L V + L EAV + +M++ GI+P+ ++ +++ A A D LG++I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 119 HGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
H + K GY D + AN LV++Y K G+ VF I + VSWN++I+ E
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKE---LGRQLHC-SLIKMEIKSDPI 233
+ AL+ F+ M + P+ FT S + AC+ + + E +G+Q+H L K E+ S
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--F 237
Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
+ LV MY K G + ++++ ++L+ WN V+S QN +EA M EG
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT-AFESDDYIVNSLIDAYGKCGHVEDA 352
V D+ T+S+VL + + + + K++HA ++K + + + ++ ++L+D Y C V
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNACAN 411
++F + +MI Y+Q +EAL L++ M++ + +S + ++ AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
A+ + + +H ++K G D F N+L++MY++ G ID A R F ++ DR +V+W+ M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 472 IGGLAQHGRGKEALQMFGQM--LEDGV---------LPNHITLVSVLCACNHAGLVAEAK 520
I G ++AL + +M LE V PN ITL+++L +C +A+ K
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 521 H-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAAR 579
H +++ + ++D+ + G Q + ++ D +P Q N W ++ A
Sbjct: 538 EIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594
Query: 580 IYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYAS---AGMWDNVAKVRRFMKDNKLKK 635
++ N GQ A ++L + + V +++A+ +GM D ++ MK +
Sbjct: 595 MHGN---GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDY--- 648
Query: 636 EPGMSWIEVKDKVYTFTVGDRSHA-RSKEIYAKLDEVSDLLNKAG 679
+E Y V A R KE Y ++ + NKAG
Sbjct: 649 -----GVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/774 (39%), Positives = 456/774 (58%), Gaps = 7/774 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VLK + D G Q+H + GF D V SLV Y K NF D R++FD + ER+
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VV+W +L S Y +E + F M G +PN F+ ++ + A G G ++H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+K G D + +N+L+++Y K GN+ A +F E +V+WN++I+G + +
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL +F M+ + + + ++ S +K CA ++ QLHCS++K D + L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 241 MYAKCGSM-DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
Y+KC +M D R+ + N+++W +ISG LQN G EA LF M R+GV ++
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
T S +L ++ +VHA VKT +E + +L+DAY K G VE+A K+F
Sbjct: 399 TYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA-YEQG 418
D+VA ++M+ YAQ G E A+K++ E+ I P+ F SS+LN CA +A QG
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
KQ H IK S ++L+ MYAK G+I+ A+ F ++ +VSW++MI G AQH
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQH 574
Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
G+ +AL +F +M + V + +T + V AC HAGLV E + +F+ M + I P +EH
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
+CM+D+ RAG+ ++AM++++ MP A +++W +L A R++K E+G+ AAE + A++
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 694
Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
PE S+ +VLLSN+YA +G W AKVR+ M + +KKEPG SWIEVK+K Y+F GDRSH
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPP 718
+IY KL+++S L GY P L D+++ KE +L HSE+LA+AFGLIATP
Sbjct: 755 PLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPK 814
Query: 719 GATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHF-RNGSCSCGGYW 771
G+ + + KNLR+C DCH + I+KI REI+VRD NRFHHF +G CSCG +W
Sbjct: 815 GSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 279/539 (51%), Gaps = 23/539 (4%)
Query: 33 ANSLVVMYAKCGNFIDSRRL------FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
AN + + C + S RL FD P R S+ SL + +EA F
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83
Query: 87 MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
+ G+ + SS++ A D L GR++H IK G+ D+ +LVD Y K N
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143
Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKA 206
+D VF +++ ++V+W +I+G + ND L LF +M++ PN FT+ +AL
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203
Query: 207 CAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAW 266
A + G Q+H ++K + V L+++Y KCG++ +AR++F K+++ W
Sbjct: 204 LAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263
Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
N +ISG+ NG D+EA +F M V +++ ++V+K A+ + + +Q+H VK
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV-DLVACTSMITAYAQFGLGEEALK 385
F D I +L+ AY KC + DA+++FKE V ++V+ T+MI+ + Q EEA+
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYA 445
L+ EM+ + + P+ F S +L A +S E VH ++K + + G +L++ Y
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYV 439
Query: 446 KCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVS 505
K G +++A + FS I D+ IV+WSAM+ G AQ G + A++MFG++ + G+ PN T S
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 506 VL--CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC----MIDILGRAGKFQEAMEL 558
+L CA +A + + H F I+ + C ++ + + G + A E+
Sbjct: 500 ILNVCAATNASMGQGKQFH------GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 300/785 (38%), Positives = 472/785 (60%), Gaps = 16/785 (2%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
+LK+C +D LG VH ++ + D + NSL+ +Y+K G+ + +F+ +
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 58 ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK 117
+R VVSW+++ +CY + +A+ F E + G+ PN++ +++I AC+ S +GR
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 118 IHGYSIKLG-YDSDMFSANALVDMYAKVGN-LEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
G+ +K G ++SD+ +L+DM+ K N E+A VF + ++V+W +I C+
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
A++ F M S + FT +S ACA +E LG+QLH I+ + D V
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 236 VGLVDMYAKC---GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG-DMEAASLFPWMYR 291
LVDMYAKC GS+D+ R +F M + ++++W +I+G+++N EA +LF M
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 292 EG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
+G V + T S+ K+ + V KQV + K S+ + NS+I + K +E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
DA + F+ S +LV+ + + + E+A KL E+ +RE+ +F +SLL+ A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA 470
N+ + +G+Q+H ++K G + N+L++MY+KCGSID A R F+ + +R ++SW++
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 471 MIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
MI G A+HG L+ F QM+E+GV PN +T V++L AC+H GLV+E HF SM +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
I+P EHYACM+D+L RAG +A E ++TMPFQA+ VW LGA R++ N E+G+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
A + ++P + + ++ LSNIYA AG W+ ++RR MK+ L KE G SWIEV DK++
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV----EESEKEQLLYHHSEK 706
F VGD +H + +IY +LD + + + GYVP + LH + +E+EKE+LLY HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785
Query: 707 LAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCS 766
+AVAFGLI+T +RV KNLR+C DCH + ++IS + REI++RD+NRFHHF++G CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845
Query: 767 CGGYW 771
C YW
Sbjct: 846 CNDYW 850
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 253/510 (49%), Gaps = 15/510 (2%)
Query: 77 LEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
L AV M GIRP + + SS++ +C + D LG+ +H I+ + D N
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 136 ALVDMYAKVGNLEDAVAVFKDIEH---PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
+L+ +Y+K G+ A VF+ + D+VSW+A++A + A+K+F +
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKC-GSMDE 250
+ PN + YT+ ++AC+ + +GR L+K +SD VG L+DM+ K S +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 251 ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS 310
A +F M E N++ W ++I+ +Q G EA F M G D+ TLS+V + A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 311 FQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC---GHVEDAVKIFKESSAVDLVAC 367
+ + + KQ+H+ ++++ D + SL+D Y KC G V+D K+F +++
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 368 TSMITAYAQ-FGLGEEALKLYLEMQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
T++IT Y + L EA+ L+ EM + + P+ F SS AC NLS GKQV
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
K G S++ NS+++M+ K ++DA RAF + ++ +VS++ + G ++ ++A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 486 QMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
++ ++ E + + T S+L + G + + + S K G+ Q +I +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGE-QIHSQVVKLGLSCNQPVCNALISM 518
Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALL 575
+ G A + + M N W +++
Sbjct: 519 YSKCGSIDTASRVFNFME-NRNVISWTSMI 547
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 296/720 (41%), Positives = 443/720 (61%), Gaps = 4/720 (0%)
Query: 54 DAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSL 113
DA ++ N S Y+H + F +MV S + ++ + M+ A A DSL
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML-ATAVKVDSL 331
Query: 114 -LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
LG+++H ++KLG D + +N+L++MY K+ A VF ++ D++SWN+VIAG
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM-ELKELGRQLHCSLIKMEIKSD 231
+ A+ LF Q+ + P+ +T TS LKA + + E L +Q+H IK+ SD
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 232 PIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYR 291
V L+D Y++ M EA ++F +L+AWN +++G+ Q+ + LF M++
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 292 EGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
+G D TL+TV K+ AI KQVHA ++K+ ++ D ++ + ++D Y KCG +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 352 AVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACAN 411
A F D VA T+MI+ + G E A ++ +M+ + PD F ++L A +
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 412 LSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM 471
L+A EQG+Q+H + +K +D F G SLV+MYAKCGSIDDA F I I +W+AM
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 472 IGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
+ GLAQHG GKE LQ+F QM G+ P+ +T + VL AC+H+GLV+EA H SM +G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAA 591
I+P EHY+C+ D LGRAG ++A L+++M +A+AS++ LL A R+ + E G+ A
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 592 EMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTF 651
L +EP SS +VLLSN+YA+A WD + R MK +K+KK+PG SWIEVK+K++ F
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIF 870
Query: 652 TVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAF 711
V DRS+ +++ IY K+ ++ + + GYVP + L DVEE EKE+ LY+HSEKLAVAF
Sbjct: 871 VVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAF 930
Query: 712 GLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
GL++TPP IRV KNLR+C DCH + ++I+K+ +REI++RD NRFH F++G CSCG YW
Sbjct: 931 GLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 188/640 (29%), Positives = 303/640 (47%), Gaps = 40/640 (6%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+LK C ++ HG G D DEFVA +LV +Y K G + + LF+ +P R
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VV WN + Y+ F EEA+ SG+ PNE +L + SGD
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI---SGD--------- 258
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
DSD + + GN DA +V +I+ N ++ +
Sbjct: 259 -------DSDAGQVKSFAN-----GN--DASSV------SEIIFRNKGLSEYLHSGQYSA 298
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
LK F M S++ + T+ L ++ LG+Q+HC +K+ + V L++
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MY K AR +F M E++LI+WN VI+G QNG ++EA LF + R G+ DQ T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 301 LSTVLKSVASF-QAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
+++VLK+ +S + + + KQVH ++K SD ++ +LIDAY + +++A +F E
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
DLVA +M+ Y Q G + LKL+ M + D F +++ C L A QGK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
QVH + IK G+ D + + +++MY KCG + A AF IP V+W+ MI G ++G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEH 538
+ A +F QM GVLP+ T+ ++ A + + + + H +++ P
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG- 656
Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEML-FA 596
++D+ + G +A L + N + W A+L G A+ + E Q +M
Sbjct: 657 -TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
I+P+K + +LS S + + +R D +K E
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 247/526 (46%), Gaps = 39/526 (7%)
Query: 2 LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
L+ + DL LG H ++ + + F+ N+L+ MY+KCG+ +RR+FD +P+R +
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 62 VSWNSLFSCYVH-----CDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGR 116
VSWNS+ + Y + +++A F+ + + + +LS M+ C SG
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
HGY+ K+G D D F A ALV++Y K G +++ +F+++ + D+V WN ++ +
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
+ A+ L SS +NPN T L+ L R I D
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEIT------------LRLLAR----------ISGDD-SDA 262
Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
G V +A I I N +S +L +G F M V
Sbjct: 263 GQVKSFANGNDASSVSEI---------IFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
DQ T +L + ++ + +QVH +++K + + NSLI+ Y K A +F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL-SAY 415
S DL++ S+I AQ GL EA+ L++++ + PD + +S+L A ++L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
KQVHVH IK +SD+F +L++ Y++ + +A+ F E + +V+W+AM+ G
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGY 492
Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
Q G + L++F M + G + TL +V C + + K
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ 538
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 222/520 (42%), Gaps = 55/520 (10%)
Query: 109 SGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAV 168
S D +LG+ H + + + F N L+ MY+K G+L A VF + D+VSWN++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 169 IAG------CVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCS 222
+A CV+ E+ A LF+ ++ + + T + LK C H
Sbjct: 112 LAAYAQSSECVV-ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 223 LIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEA 282
K+ + D V LV++Y K G + E +++F MP ++++ WN+++ +L+ G EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 283 ASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDA 342
L + G+ ++ TL + + DD
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLAR----------------------ISGDD--------- 259
Query: 343 YGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVC 402
G V+ SS +++ ++ Y G LK + +M + ++ D
Sbjct: 260 -SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTF 318
Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
+L + + G+QVH +K G NSL+NMY K A F + +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE 378
Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH--AGLVAEAK 520
R ++SW+++I G+AQ+G EA+ +F Q+L G+ P+ T+ SVL A + GL +
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQ 438
Query: 521 HHFESMEKKFGIQPMQEHY--ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA 578
H +++ I + + + +ID R +EA L + F A W A++
Sbjct: 439 VHVHAIK----INNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVA--WNAMMAG- 491
Query: 579 RIYKNVEVGQHAAEMLFAI--EPEKSSTHVLLSNIYASAG 616
Y G H LFA+ + + S L+ ++ + G
Sbjct: 492 --YTQSHDG-HKTLKLFALMHKQGERSDDFTLATVFKTCG 528
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/746 (37%), Positives = 450/746 (60%), Gaps = 9/746 (1%)
Query: 33 ANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG- 91
N+++ + K G+ +R LFDA+P+R+VV+W L Y +EA F++M S
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 92 -IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMF--SANALVDMYAKVGNLE 148
P+ + ++++ C + ++H +++KLG+D++ F +N L+ Y +V L+
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
A +F++I D V++N +I G ++ LF +M+ S P+ FT++ LKA
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
G+ LG+QLH + D VG ++D Y+K + E RM+F MPE + +++N+
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTL--STVLKSVASFQAIGVCKQVHALSVK 326
VIS + Q D ASL + + +GFD+ +T+L A+ ++ + +Q+H ++
Sbjct: 322 VISSYSQ--ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
+S ++ NSL+D Y KC E+A IFK V+ T++I+ Y Q GL LKL
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAK 446
+ +M+ + D +++L A A+ ++ GKQ+H II+ G + + F+G+ LV+MYAK
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 447 CGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSV 506
CGSI DA + F E+PDR VSW+A+I A +G G+ A+ F +M+E G+ P+ ++++ V
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 507 LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQA 566
L AC+H G V + +F++M +GI P ++HYACM+D+LGR G+F EA +L+D MPF+
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 567 NASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK-SSTHVLLSNIYASAGMWDNVAKVR 625
+ +W ++L A RI+KN + + AAE LF++E + ++ +V +SNIYA+AG W+ V V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 626 RFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVE 685
+ M++ +KK P SW+EV K++ F+ D++H EI K++E++ + + GY P
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 686 TDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIV 745
+ + DV+E K + L +HSE+LAVAF LI+TP G I V KNLR C DCH + + ISKIV
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799
Query: 746 SREIIVRDVNRFHHFRNGSCSCGGYW 771
REI VRD +RFHHF G CSCG YW
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 273/556 (49%), Gaps = 50/556 (8%)
Query: 16 QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRL------FDAIPERSVVSWNSLFS 69
QVH V GFD++ F+ S V++ + C + RRL F+ IPE+ V++N+L +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYC----EVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 70 CYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS 129
Y E++ F +M SG +P++F+ S ++ A G D LG+++H S+ G+
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
D N ++D Y+K + + +F ++ D VS+N VI+ + + +L F++M+
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
+ F + + L A + ++GRQLHC + S VG LVDMYAKC +
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
EA +IF +P++ ++W +ISG++Q G LF M + DQ+T +TVLK+ A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
SF ++ + KQ+HA +++ + + + L+D Y KCG ++DAV++F+E + V+ +
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523
Query: 370 MITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFG 429
+I+A+A G GE A+ + +M + + PDS +L AC++ EQG + F
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY------FQ 577
Query: 430 FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFG 489
MS + YA M+ L ++GR EA ++
Sbjct: 578 AMSPIYGITPKKKHYA------------------------CMLDLLGRNGRFAEAEKLMD 613
Query: 490 QMLEDGVLPNHITLVSVLCACN---HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
+M + P+ I SVL AC + L A SMEK Y M +I
Sbjct: 614 EMPFE---PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA----YVSMSNIY 666
Query: 547 GRAGKFQEAMELVDTM 562
AG++++ ++ M
Sbjct: 667 AAAGEWEKVRDVKKAM 682
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 215/472 (45%), Gaps = 47/472 (9%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VLKA D LG Q+H + V TGF D V N ++ Y+K +++R LFD +PE
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VS+N + S Y D E ++ FF+EM G F ++M++ A +GR++H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
++ DS + N+LVDMYAK E+A +FK + VSW A+I+G V +
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
LKLF +M+ S + + T+ + LKA A LG+QLH +I+ + G GLVD
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAKCGS+ +A +F MP++N ++WN +IS H NG A F M G+ D +
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
+ VL A CG VE + F+ S
Sbjct: 556 ILGVLT-----------------------------------ACSHCGFVEQGTEYFQAMS 580
Query: 361 AVDLV-------ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
+ + AC M+ + G EA KL EM PD + SS+LNAC
Sbjct: 581 PIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNACRIHK 635
Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
++ + + D A S+ N+YA G + + +RGI
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 242/503 (48%), Gaps = 49/503 (9%)
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV-- 173
R++ IK G+D+D +N +V+ + G + A V+ ++ H + VS N +I+G V
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 174 -----------------------------LHEHNDWALKLFQQM--KSSEINPNMFTYTS 202
+ H D A KLF+QM SS P+ T+T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 203 ALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG--LVDMYAKCGSMDEARMIFHLMPE 260
L C + Q+H +K+ ++P + V L+ Y + +D A ++F +PE
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
K+ + +N +I+G+ ++G E+ LF M + G T S VLK+V + +Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 321 HALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLG 380
HALSV T F D + N ++D Y K V + +F E +D V+ +I++Y+Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
E +L + EMQ + +F +++L+ ANLS+ + G+Q+H + S GNSL
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
V+MYAKC ++A+ F +P R VSW+A+I G Q G L++F +M + +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 501 ITLVSVLCACNHAG--LVAEAKHHF----ESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
T +VL A L+ + H F ++E F + ++D+ + G ++
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS-------GSGLVDMYAKCGSIKD 505
Query: 555 AMELVDTMPFQANASVWGALLGA 577
A+++ + MP NA W AL+ A
Sbjct: 506 AVQVFEEMP-DRNAVSWNALISA 527
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/772 (36%), Positives = 452/772 (58%), Gaps = 6/772 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L+ C+S K+L Q+ +V G + F LV ++ + G+ ++ R+F+ I +
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
V ++++ + L++A+ FF M + P ++ + ++ C + +G++IHG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+K G+ D+F+ L +MYAK + +A VF + D+VSWN ++AG +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL++ + M + P+ T S L A + + L +G+++H ++ S + LVD
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAKCGS++ AR +F M E+N+++WN +I ++QN EA +F M EGV +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
+ L + A + + +H LSV+ + + +VNSLI Y KC V+ A +F +
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
+ LV+ +MI +AQ G +AL + +M+ R + PD+F S++ A A LS K
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
+H +++ + F +LV+MYAKCG+I A F + +R + +W+AMI G HG
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
GK AL++F +M + + PN +T +SV+ AC+H+GLV F M++ + I+ +HY
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579
Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
M+D+LGRAG+ EA + + MP + +V+GA+LGA +I+KNV + AAE LF + P+
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639
Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
HVLL+NIY +A MW+ V +VR M L+K PG S +E+K++V++F G +H
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699
Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDL-HDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
SK+IYA L+++ + +AGYVP +T+L VE KEQLL HSEKLA++FGL+ T G
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVP--DTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAG 757
Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
TI V+KNLR+C DCH + ++IS + REI+VRD+ RFHHF+NG+CSCG YW
Sbjct: 758 TTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/772 (35%), Positives = 448/772 (58%), Gaps = 1/772 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VL+ C K L G +V + GF D + + L +MY CG+ ++ R+FD +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+ WN L + ++ FK+M+ SG+ + ++ S + + + G ++HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ +K G+ N+LV Y K ++ A VF ++ D++SWN++I G V + +
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
L +F QM S I ++ T S CA L LGR +H +K + L+D
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MY+KCG +D A+ +F M +++++++ +I+G+ + G EA LF M EG+ D T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
++ VL A ++ + K+VH + D ++ N+L+D Y KCG +++A +F E
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLY-LEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
D+++ ++I Y++ EAL L+ L ++++ +PD + +L ACA+LSA+++G+
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
++H +I++ G+ SD NSLV+MYAKCG++ A F +I + +VSW+ MI G HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
GKEA+ +F QM + G+ + I+ VS+L AC+H+GLV E F M + I+P EHY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
AC++D+L R G +A ++ MP +A++WGALL RI+ +V++ + AE +F +EP
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
E + +VL++NIYA A W+ V ++R+ + L+K PG SWIE+K +V F GD S+
Sbjct: 700 ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759
Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
++ I A L +V + + GY P+ + L D EE EKE+ L HSEKLA+A G+I++ G
Sbjct: 760 ETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819
Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
IRV KNLR+C DCH +F+SK+ REI++RD NRFH F++G CSC G+W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 251/468 (53%), Gaps = 13/468 (2%)
Query: 47 IDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG---IRPNEFSLSSMI 103
+DS FD RSV N+ + LE AV K + +SG I P +L S++
Sbjct: 51 VDSITTFD----RSVTDANTQLRRFCESGNLENAV---KLLCVSGKWDIDPR--TLCSVL 101
Query: 104 NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIV 163
CA S G+++ + G+ D + L MY G+L++A VF +++ +
Sbjct: 102 QLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKAL 161
Query: 164 SWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSL 223
WN ++ ++ LF++M SS + + +T++ K+ + + G QLH +
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 224 IKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
+K VG LV Y K +D AR +F M E+++I+WN +I+G++ NG +
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 284 SLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAY 343
S+F M G+ D T+ +V A + I + + VH++ VK F +D N+L+D Y
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
KCG ++ A +F+E S +V+ TSMI YA+ GL EA+KL+ EM++ I+PD + +
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
++LN CA ++GK+VH I + D F N+L++MYAKCGS+ +A+ FSE+ +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL-PNHITLVSVLCAC 510
I+SW+ +IGG +++ EAL +F +LE+ P+ T+ VL AC
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 153/338 (45%), Gaps = 3/338 (0%)
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
D TL +VL+ A +++ K+V F D + + L Y CG +++A ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
E + ++ A+ G ++ L+ +M + DS+ S + + ++L +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
G+Q+H I+K GF GNSLV Y K +D A + F E+ +R ++SW+++I G
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
+G ++ L +F QML G+ + T+VSV C + L++ + S+ K
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR-AVHSIGVKACFSRED 331
Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM-LF 595
++D+ + G A + M ++ S + G AR E + EM
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 596 AIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
I P+ + +L N A + D +V ++K+N L
Sbjct: 392 GISPDVYTVTAVL-NCCARYRLLDEGKRVHEWIKENDL 428
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/778 (36%), Positives = 445/778 (57%), Gaps = 7/778 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V+KAC D+ +GL VHG+VV TG D FV N+LV Y G D+ +LFD +PER+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS----GIRPNEFSLSSMINACAGSGDSLLGR 116
+VSWNS+ + F EE+ EM+ P+ +L +++ CA + LG+
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
+HG+++KL D ++ NAL+DMY+K G + +A +FK + ++VSWN ++ G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 177 HNDWALKLFQQMKS--SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
+ +QM + ++ + T +A+ C ++LHC +K E + +V
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
V YAKCGS+ A+ +FH + K + +WN +I GH Q+ + M G+
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
D T+ ++L + + +++ + K+VH ++ E D ++ S++ Y CG +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
+F LV+ ++IT Y Q G + AL ++ +M I + AC+ L +
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
G++ H + +K D F SL++MYAK GSI + + F+ + ++ SW+AMI G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
HG KEA+++F +M G P+ +T + VL ACNH+GL+ E + + M+ FG++P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 535 MQEHYACMIDILGRAGKFQEAMELV-DTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
+HYAC+ID+LGRAG+ +A+ +V + M +A+ +W +LL + RI++N+E+G+ A
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
LF +EPEK +VLLSN+YA G W++V KVR+ M + L+K+ G SWIE+ KV++F V
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 654 GDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGL 713
G+R +EI + + ++K GY P + HD+ E EK + L HSEKLA+ +GL
Sbjct: 853 GERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGL 912
Query: 714 IATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
I T G TIRV KNLRICVDCH + + ISK++ REI+VRD RFHHF+NG CSCG YW
Sbjct: 913 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 300/587 (51%), Gaps = 18/587 (3%)
Query: 1 VLKACTSKKDLFLGLQVHGIVV-FTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
+L+A +KD+ +G ++H +V T +D+ + ++ MYA CG+ DSR +FDA+ +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
++ WN++ S Y + +E + F EM+ + + P+ F+ +I ACAG D +G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
HG +K G D+F NALV Y G + DA+ +F + ++VSWN++I + +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 179 DWALKLFQQMKSSE----INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
+ + L +M P++ T + L CA LG+ +H +K+ + + ++
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG- 293
L+DMY+KCG + A+MIF + KN+++WN ++ G G + M G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 294 -VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
V D+ T+ + + K++H S+K F ++ + N+ + +Y KCG + A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
++F + + + ++I +AQ +L +L+M+ + PDSF SLL+AC+ L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
+ GK+VH II+ D F S++++Y CG + F + D+ +VSW+ +I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 473 GGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
G Q+G AL +F QM+ G+ I+++ V AC+ L+ + E+ + +
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS---LLPSLRLGREA--HAYAL 624
Query: 533 QPMQEH---YAC-MIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
+ + E AC +ID+ + G ++ ++ + + ++ AS W A++
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMI 670
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 216/424 (50%), Gaps = 12/424 (2%)
Query: 98 SLSSMINACAGSGDSLLGRKIHGY---SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVF 154
+L ++ A D +GRKIH S +L D + ++ MYA G+ +D+ VF
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL--CTRIITMYAMCGSPDDSRFVF 143
Query: 155 KDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELK 213
+ ++ WNAVI+ +E D L+ F +M ++++ P+ FTY +KACAGM
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 214 ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGH 273
+G +H ++K + D VG LV Y G + +A +F +MPE+NL++WN +I
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 274 LQNGGDMEAASLFPWMYRE-GVGF---DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
NG E+ L M E G G D TL TVL A + IG+ K VH +VK
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
+ + + N+L+D Y KCG + +A IFK ++ ++V+ +M+ ++ G + +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 390 M--QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
M ++ D + + C + S K++H + +K F+ + N+ V YAKC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
GS+ A R F I + + SW+A+IGG AQ + +L QM G+LP+ T+ S+L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 508 CACN 511
AC+
Sbjct: 504 SACS 507
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)
Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL-SVKTAFESDDYIV 336
GD E++S + RE +G +L++ + I + +++H L S T +DD +
Sbjct: 71 GDDESSSDAFLLVREALGL-------LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 123
Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM-QDREI 395
+I Y CG +D+ +F + +L ++I++Y++ L +E L+ ++EM ++
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
PD F ++ ACA +S G VH ++K G + D F GN+LV+ Y G + DA +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE---DGV-LPNHITLVSVLCAC 510
F +P+R +VSW++MI + +G +E+ + G+M+E DG +P+ TLV+VL C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/699 (37%), Positives = 419/699 (59%), Gaps = 9/699 (1%)
Query: 77 LEEAVCFFKEMVL--SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
+ EA C ++ SGI + F +S+I++ ++IH + LG F
Sbjct: 1 MSEASCLASPLLYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLI 56
Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEIN 194
L+ + G++ A VF D+ P I WNA+I G + H AL ++ M+ + ++
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 195 PNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMI 254
P+ FT+ LKAC+G+ ++GR +H + ++ +D V GL+ +YAKC + AR +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 255 FH--LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQ 312
F +PE+ +++W ++S + QNG MEA +F M + V D L +VL + Q
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 313 AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
+ + +HA VK E + ++ SL Y KCG V A +F + + +L+ +MI+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
YA+ G EA+ ++ EM ++++ PD+ +S ++ACA + + EQ + ++ ++ + +
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML 492
D F ++L++M+AKCGS++ A F DR +V WSAMI G HGR +EA+ ++ M
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 493 EDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKF 552
GV PN +T + +L ACNH+G+V E F M I P Q+HYAC+ID+LGRAG
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHL 475
Query: 553 QEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
+A E++ MP Q +VWGALL A + +++VE+G++AA+ LF+I+P + +V LSN+Y
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535
Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
A+A +WD VA+VR MK+ L K+ G SW+EV+ ++ F VGD+SH R +EI +++ +
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595
Query: 673 DLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICV 732
L + G+V + LHD+ + E E+ L HSE++A+A+GLI+TP G +R+ KNLR CV
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655
Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
+CH + + ISK+V REI+VRD NRFHHF++G CSCG YW
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 233/466 (50%), Gaps = 3/466 (0%)
Query: 16 QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
Q+H ++ G F+ L+ + G+ +R++FD +P + WN++ Y +
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 76 FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
++A+ + M L+ + P+ F+ ++ AC+G +GR +H +LG+D+D+F N
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPD--IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
L+ +YAK L A VF+ + P+ IVSW A+++ + AL++F QM+ ++
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
P+ S L A ++ + GR +H S++KM ++ +P + + L MYAKCG + A++
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
+F M NLI WN +ISG+ +NG EA +F M + V D ++++ + + A +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
+ + ++ ++ + D +I ++LID + KCG VE A +F + D+V ++MI
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
Y G EA+ LY M+ ++P+ LL AC + +G +
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQ 458
Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
++++ + G +D A +P G+ W A++ +H
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 233/469 (49%), Gaps = 26/469 (5%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--E 58
+LKAC+ L +G VH V GFD+D FV N L+ +YAKC +R +F+ +P E
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
R++VSW ++ S Y EA+ F +M ++P+ +L S++NA D GR I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
H +K+G + + +L MYAK G + A +F ++ P+++ WNA+I+G + +
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
A+ +F +M + ++ P+ + TSA+ ACA + E R ++ + + + + D + L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+DM+AKCGS++ AR++F +++++ W+ +I G+ +G EA SL+ M R GV +
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS-------LIDAYGKCGHVED 351
T +L + G+ ++ + A D+ +N +ID G+ GH++
Sbjct: 425 VTFLGLLMAC---NHSGMVREGWWFFNRMA----DHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 352 AVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
A ++ K + A S + LGE A + + N +V S L
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS--NTGHYVQLSNLY 535
Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
A A L +++ +V V + + G D G S V + + + D++
Sbjct: 536 AAARL--WDRVAEVRVRMKEKGLNKDV--GCSWVEVRGRLEAFRVGDKS 580
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 286/774 (36%), Positives = 463/774 (59%), Gaps = 4/774 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+LKAC +D+ G ++H ++V G+ S F+ N+LV MYAK + +RRLFD E+
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 61 -VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
V WNS+ S Y E + F+EM ++G PN +++ S + AC G + LG++IH
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 120 GYSIKLG-YDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
+K + S+++ NAL+ MY + G + A + + + + D+V+WN++I G V +
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
AL+ F M ++ + + TS + A + G +LH +IK S+ VG L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+DMY+KC F M +K+LI+W VI+G+ QN +EA LF + ++ + D+
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
L ++L++ + +++ + K++H ++ D I N L+D YGKC ++ A ++F+
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFES 546
Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
D+V+ TSMI++ A G EA++L+ M + ++ DS +L+A A+LSA +G
Sbjct: 547 IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 606
Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
+++H ++++ GF + ++V+MYA CG + A F I +G++ +++MI H
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
G GK A+++F +M + V P+HI+ +++L AC+HAGL+ E + + ME ++ ++P EH
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 726
Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
Y C++D+LGRA EA E V M + A VW ALL A R + E+G+ AA+ L +E
Sbjct: 727 YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELE 786
Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
P+ VL+SN++A G W++V KVR MK + ++K PG SWIE+ KV+ FT D+SH
Sbjct: 787 PKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 846
Query: 659 ARSKEIYAKLDEVSDLLNK-AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
SKEIY KL EV+ L + GYV + LH+V+E EK Q+L+ HSE++A+A+GL+ TP
Sbjct: 847 PESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTP 906
Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
A +R+ KNLR+C DCHT + +SK+ R+I++RD NRFHHF +G CSCG W
Sbjct: 907 DRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 299/603 (49%), Gaps = 50/603 (8%)
Query: 1 VLKACTSKKDLFLGLQVHGIV--VFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE 58
VL+ C ++ + G Q+H + F F+ D F+A LV MY KCG+ D+ ++FD +P+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
R+ +WN++ YV A+ + M + G+ S +++ ACA D G ++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDI-EHPDIVSWNAVIAGCVLHEH 177
H +KLGY S F NALV MYAK +L A +F E D V WN++++
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-VGV 236
+ L+LF++M + PN +T SAL AC G +LG+++H S++K S + V
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
L+ MY +CG M +A I M +++ WN +I G++QN EA F M G
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
D+ ++++++ + + ++HA +K ++S+ + N+LID Y KC + F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
DL++ T++I YAQ EAL+L+ ++ + + D + S+L A + L +
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504
Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
K++H HI++ G + DT N LV++Y KC ++ A R F I + +VSW++MI A
Sbjct: 505 IVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSV------------------------------ 506
+G EA+++F +M+E G+ + + L+ +
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623
Query: 507 -------LCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
+ AC G + AK F+ +E+K +Q Y MI+ G G + A+EL
Sbjct: 624 IAVAVVDMYAC--CGDLQSAKAVFDRIERKGLLQ-----YTSMINAYGMHGCGKAAVELF 676
Query: 560 DTM 562
D M
Sbjct: 677 DKM 679
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 172/329 (52%), Gaps = 5/329 (1%)
Query: 185 FQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMY 242
FQ++ SE N + + L+ C GRQLH + K + D + G LV MY
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMY 126
Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
KCGS+D+A +F MP++ AWN +I ++ NG A +L+ M EGV ++
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSA 361
+LK+ A + I ++H+L VK + S +IVN+L+ Y K + A ++F
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
D V S++++Y+ G E L+L+ EM P+S+ S L AC S + GK++
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 422 HVHIIKFG-FMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
H ++K S+ + N+L+ MY +CG + A+R ++ + +V+W+++I G Q+
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
KEAL+ F M+ G + +++ S++ A
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/776 (36%), Positives = 451/776 (58%), Gaps = 10/776 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V+KAC D +G V+ ++ GF+SD FV N+LV MY++ G +R++FD +P R
Sbjct: 112 VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+VSWNSL S Y + EEA+ + E+ S I P+ F++SS++ A G+ +HG
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 231
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+++K G +S + N LV MY K DA VF +++ D VS+N +I G + E +
Sbjct: 232 FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEE 291
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
++++F + + P++ T +S L+AC + L + ++ ++K + V L+D
Sbjct: 292 SVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID 350
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
+YAKCG M AR +F+ M K+ ++WN +ISG++Q+G MEA LF M D T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
++ + K +H+ +K+ D + N+LID Y KCG V D++KIF
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
D V ++I+A +FG L++ +M+ E+ PD L CA+L+A GK+
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
+H +++FG+ S+ GN+L+ MY+KCG ++++ R F + R +V+W+ MI +G
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
G++AL+ F M + G++P+ + ++++ AC+H+GLV E FE M+ + I PM EHYA
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
C++D+L R+ K +A E + MP + +AS+W ++L A R ++E + + + + P+
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
+L SN YA+ WD V+ +R+ +KD + K PG SWIEV V+ F+ GD S +
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQ 770
Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES-----EKEQLLYHHSEKLAVAFGLIA 715
S+ IY L+ + L+ K GY+P D +V ++ EK +L+ HSE+LA+AFGL+
Sbjct: 771 SEAIYKSLEILYSLMAKEGYIP----DPREVSQNLEEEEEKRRLICGHSERLAIAFGLLN 826
Query: 716 TPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
T PG ++V KNLR+C DCH + ISKIV REI+VRD NRFH F++G+CSC W
Sbjct: 827 TEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 172/615 (27%), Positives = 310/615 (50%), Gaps = 11/615 (1%)
Query: 3 KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI-PERSV 61
+A +S +L ++H +V+ G DS +F + L+ Y+ S +F + P ++V
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 62 VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
WNS+ + EA+ F+ ++ S + P++++ S+I ACAG D+ +G ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 122 SIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWA 181
+ +G++SD+F NALVDMY+++G L A VF ++ D+VSWN++I+G H + + A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 182 LKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDM 241
L+++ ++K+S I P+ FT +S L A + + + G+ LH +K + S +V GLV M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 242 YAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTL 301
Y K +AR +F M ++ +++N +I G+L+ E+ +F + D T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTV 310
Query: 302 STVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSA 361
S+VL++ + + + K ++ +K F + + N LID Y KCG + A +F
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
D V+ S+I+ Y Q G EA+KL+ M E D L++ L+ + GK +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
H + IK G D N+L++MYAKCG + D+ + FS + V+W+ +I + G
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEA-KHHFESMEKKFGIQPMQEHYA 540
LQ+ QM + V+P+ T + L C A L A+ +FG + +
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMC--ASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
+I++ + G + + + + M + + W ++ A +Y G+ A E +E
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKS 604
Query: 601 K--SSTHVLLSNIYA 613
+ V ++ IYA
Sbjct: 605 GIVPDSVVFIAIIYA 619
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/783 (38%), Positives = 462/783 (59%), Gaps = 12/783 (1%)
Query: 1 VLKACT-SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
V AC+ ++ D+ L Q+ + +G +D FV + LV +AK G+ +R++F+ + R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEM-VLSGIRPNEFS--LSSMINACAGSGDSLL-G 115
+ V+ N L V + EEA F +M + + P + LSS L G
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332
Query: 116 RKIHGYSIKLGYDSDMFS-ANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
R++HG+ I G M N LV+MYAK G++ DA VF + D VSWN++I G
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
+ A++ ++ M+ +I P FT S+L +CA ++ +LG+Q+H +K+ I + V
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM-EAASLFPWMYREG 293
L+ +YA+ G ++E R IF MPE + ++WN +I ++ + EA F R G
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
++ T S+VL +V+S + KQ+H L++K + N+LI YGKCG ++
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 354 KIF-KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
KIF + + D V SMI+ Y L +AL L M DSF+ +++L+A A++
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
+ E+G +VH ++ SD G++LV+MY+KCG +D A R F+ +P R SW++MI
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 473 GGLAQHGRGKEALQMFGQMLEDG-VLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG 531
G A+HG+G+EAL++F M DG P+H+T V VL AC+HAGL+ E HFESM +G
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752
Query: 532 IQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAA--RIYKNVEVGQH 589
+ P EH++CM D+LGRAG+ + + ++ MP + N +W +LGA + E+G+
Sbjct: 753 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 812
Query: 590 AAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVY 649
AAEMLF +EPE + +VLL N+YA+ G W+++ K R+ MKD +KKE G SW+ +KD V+
Sbjct: 813 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 872
Query: 650 TFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAV 709
F GD+SH + IY KL E++ + AGYVP L+D+E+ KE++L +HSEKLAV
Sbjct: 873 MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAV 932
Query: 710 AFGLIATPPGA-TIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
AF L A IR+ KNLR+C DCH++F++ISKI R+II+RD NRFHHF++G+CSC
Sbjct: 933 AFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCS 992
Query: 769 GYW 771
+W
Sbjct: 993 DFW 995
Score = 233 bits (594), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 257/492 (52%), Gaps = 17/492 (3%)
Query: 26 FDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
D D ++ N+L+ Y + G+ + +R++FD +P R+ VSW + S Y +EA+ F +
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 86 EMVLSGIRPNEFSLSSMINACA--GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAK 143
+MV GI N+++ S++ AC GS L GR+IHG KL Y D +N L+ MY K
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 144 -VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTS 202
+G++ A+ F DIE + VSWN++I+ A ++F M+ P +T+ S
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 203 AL-KACAGMELK-ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
+ AC+ E L Q+ C++ K + +D VG GLV +AK GS+ AR +F+ M
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF---QAIGVC 317
+N + N ++ G ++ EA LF M + + +L S + + +G+
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLK 330
Query: 318 K--QVHALSVKTAFESDDYIV---NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
K +VH + T D++V N L++ Y KCG + DA ++F + D V+ SMIT
Sbjct: 331 KGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMS 432
Q G EA++ Y M+ +I P SF S L++CA+L + G+Q+H +K G
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 433 DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG-KEALQMFGQM 491
+ N+L+ +YA+ G +++ + FS +P+ VSW+++IG LA+ R EA+ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 492 LEDGVLPNHITL 503
G N IT
Sbjct: 509 QRAGQKLNRITF 520
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/597 (28%), Positives = 290/597 (48%), Gaps = 25/597 (4%)
Query: 1 VLKACT--SKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKC-GNFIDSRRLFDAIP 57
VL+AC + G Q+HG++ + D V+N L+ MY KC G+ + F I
Sbjct: 108 VLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE 167
Query: 58 ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMI-NACA-GSGDSLLG 115
++ VSWNS+ S Y A F M G RP E++ S++ AC+ D L
Sbjct: 168 VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL 227
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
+I K G +D+F + LV +AK G+L A VF +E + V+ N ++ G V
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 176 EHNDWALKLFQQMKSS-EINPNMFTYTSALKACAGMELKE-----LGRQLHCSLIKMEIK 229
+ + A KLF M S +++P +Y L + L E GR++H +I +
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL- 344
Query: 230 SDPIVGV--GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
D +VG+ GLV+MYAKCGS+ +AR +F+ M +K+ ++WN +I+G QNG +EA +
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
M R + TL + L S AS + + +Q+H S+K + + + N+L+ Y + G
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLG-EEALKLYLEMQ--DREINPDSFVCSS 404
++ + KIF D V+ S+I A A+ EA+ +L Q +++N +F
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 405 LLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD-R 463
+ + E GKQ+H +K + N+L+ Y KCG +D ++ FS + + R
Sbjct: 525 SAVSSLSFG--ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHF 523
V+W++MI G + +AL + ML+ G + +VL A + E
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL-ERGMEV 641
Query: 524 ESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAAR 579
+ + ++ + ++D+ + G+ A+ +TMP + N+ W +++ G AR
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYAR 697
Score = 196 bits (497), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 235/490 (47%), Gaps = 20/490 (4%)
Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
S + +C G + R H K D D++ N L++ Y + G+ A VF ++
Sbjct: 8 SFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA--GMELKELGRQ 218
+ VSW +++G + + AL + M I N + + S L+AC G GRQ
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKC-GSMDEARMIFHLMPEKNLIAWNIVISGHLQNG 277
+H + K+ D +V L+ MY KC GS+ A F + KN ++WN +IS + Q G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 278 GDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA--IGVCKQVHALSVKTAFESDDYI 335
A +F M +G + T +++ + S + + +Q+ K+ +D ++
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDR-E 394
+ L+ A+ K G + A K+F + + V ++ + GEEA KL+++M +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 395 INPDSFVCSSLLNACANLSAYEQ-----GKQVHVHIIKFGFMSDTFA-GNSLVNMYAKCG 448
++P+S+V LL++ S E+ G++VH H+I G + GN LVNMYAKCG
Sbjct: 306 VSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
SI DA R F + D+ VSW++MI GL Q+G EA++ + M +LP TL+S L
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 509 ACNHAGLVAEAKH-HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
+C + H ES+ K GI ++ + G E ++ +MP
Sbjct: 424 SCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 568 ASVWGALLGA 577
S W +++GA
Sbjct: 482 VS-WNSIIGA 490
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 284/790 (35%), Positives = 430/790 (54%), Gaps = 50/790 (6%)
Query: 32 VANSLVVMYAKCGNFIDSRRLFDAIP--ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
+ + L+ Y G + L P + V WNSL Y + + F M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 90 SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
P+ ++ + AC G H S+ G+ S++F NALV MY++ +L D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSS-EINPNMFTYTSALKACA 208
A VF ++ D+VSWN++I AL++F +M + P+ T + L CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
+ LG+QLHC + E+ + VG LVDMYAKCG MDEA +F M K++++WN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVAS----FQAIGVCKQ----- 319
+++G+ Q G +A LF M E + D T S + A ++A+GVC+Q
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 320 --------------------------VHALSVKTAFE-------SDDYIVNSLIDAYGKC 346
+H ++K + ++ ++N LID Y KC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 347 GHVEDAVKIFKESSA--VDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVC 402
V+ A +F S D+V T MI Y+Q G +AL+L EM +D + P++F
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
S L ACA+L+A GKQ+H + ++ + F N L++MYAKCGSI DA F +
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 462 DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH 521
+ V+W++++ G HG G+EAL +F +M G + +TL+ VL AC+H+G++ +
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIY 581
+F M+ FG+ P EHYAC++D+LGRAG+ A+ L++ MP + VW A L RI+
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 582 KNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
VE+G++AAE + + ++ LLSN+YA+AG W +V ++R M+ +KK PG SW
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720
Query: 642 IEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLY 701
+E TF VGD++H +KEIY L + + GYVP LHDV++ EK+ LL+
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLF 780
Query: 702 HHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFR 761
HSEKLA+A+G++ TP GA IR+ KNLR+C DCHT+F ++S+I+ +II+RD +RFHHF+
Sbjct: 781 EHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFK 840
Query: 762 NGSCSCGGYW 771
NGSCSC GYW
Sbjct: 841 NGSCSCKGYW 850
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 257/530 (48%), Gaps = 50/530 (9%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V KAC + G H + + TGF S+ FV N+LV MY++C + D+R++FD +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLS-GIRPNEFSLSSMINACAGSGDSLLGRKIH 119
VVSWNS+ Y + A+ F M G RP+ +L +++ CA G LG+++H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
+++ +MF N LVDMYAK G +++A VF ++ D+VSWNA++AG +
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 180 WALKLFQ-----------------------------------QMKSSEINPNMFTYTSAL 204
A++LF+ QM SS I PN T S L
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 205 KACAGMELKELGRQLHCSLIKMEIK-------SDPIVGVGLVDMYAKCGSMDEARMIF-H 256
CA + G+++HC IK I + +V L+DMYAKC +D AR +F
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 257 LMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF--DQTTLSTVLKSVASFQA 313
L P E++++ W ++I G+ Q+G +A L M+ E + T+S L + AS A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 314 IGVCKQVHALSVKTAFESDD-YIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMIT 372
+ + KQ+HA +++ + ++ N LID Y KCG + DA +F A + V TS++T
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 373 AYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI-IKFGFM 431
Y G GEEAL ++ EM+ D +L AC++ +QG + + FG
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 432 SDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGR 480
LV++ + G ++ A R E+P + V W A + HG+
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/758 (36%), Positives = 421/758 (55%), Gaps = 5/758 (0%)
Query: 16 QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
Q H ++ GF +D + L + G +R +F ++ V +N L + +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 76 FLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSA 134
++ F + S ++PN + + I+A +G D GR IHG ++ G DS++
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEI 193
+ +V MY K +EDA VF + D + WN +I+G +E ++++F+ + S
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
+ T L A A ++ LG Q+H K S V G + +Y+KCG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
+F + +++A+N +I G+ NG + SLF + G +TL +++
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
I +H +K+ F S + +L Y K +E A K+F ES L + +MI+
Sbjct: 338 I---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
Y Q GL E+A+ L+ EMQ E +P+ + +L+ACA L A GK VH + F S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
+ +L+ MYAKCGSI +A R F + + V+W+ MI G HG+G+EAL +F +ML
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 494 DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
G+ P +T + VL AC+HAGLV E F SM ++G +P +HYACM+DILGRAG Q
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 554 EAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYA 613
A++ ++ M + +SVW LLGA RI+K+ + + +E LF ++P+ HVLLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 614 SAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSD 673
+ + A VR+ K KL K PG + IE+ + + FT GD+SH + KEIY KL+++
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 674 LLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVD 733
+ +AGY P E LHDVEE E+E ++ HSE+LA+AFGLIAT PG IR+ KNLR+C+D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 734 CHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
CHT + ISKI R I+VRD NRFHHF++G CSCG YW
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 241/482 (50%), Gaps = 10/482 (2%)
Query: 2 LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
+ A + +D G +HG V G DS+ + +++V MY K D+R++FD +PE+
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 62 VSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+ WN++ S Y + E++ F++++ S R + +L ++ A A + LG +IH
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ K G S + + +Y+K G ++ A+F++ PDIV++NA+I G + +
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
+L LF+++ S T S + + L +H +K S V L
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTT 362
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
+Y+K ++ AR +F PEK+L +WN +ISG+ QNG +A SLF M + + T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
++ +L + A A+ + K VH L T FES Y+ +LI Y KCG + +A ++F +
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQG 418
+ V +MI+ Y G G+EAL ++ EM + I P +F+C +L AC++ ++G
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC--VLYACSHAGLVKEG 540
Query: 419 KQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
++ +I ++GF +V++ + G + A + + + G W ++G
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 477 QH 478
H
Sbjct: 601 IH 602
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 201/409 (49%), Gaps = 36/409 (8%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L A ++L LG+Q+H + TG S ++V + +Y+KCG LF +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+V++N++ Y E ++ FKE++LSG R +L S++ SG +L IHG
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHG 343
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
Y +K + S + AL +Y+K+ +E A +F + + SWNA+I+G + +
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
A+ LF++M+ SE +PN T T L ACA + LG+ +H + + +S V L+
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAKCGS+ EAR +F LM +KN + WN +ISG+ +G EA ++F M G+ T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
VL + + HA VK D I NS+I YG E +VK +
Sbjct: 524 FLCVLYACS-----------HAGLVKEG----DEIFNSMIHRYG----FEPSVKHY---- 560
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
AC M+ + G + AL+ M I P S V +LL AC
Sbjct: 561 -----AC--MVDILGRAGHLQRALQFIEAMS---IEPGSSVWETLLGAC 599
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 12/206 (5%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L AC L LG VH +V T F+S +V+ +L+ MYAKCG+ ++RRLFD + +++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS-----GDSLLG 115
V+WN++ S Y +EA+ F EM+ SGI P + ++ AC+ + GD +
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVL 174
IH Y G++ + +VD+ + G+L+ A+ + + P W ++ C +
Sbjct: 546 SMIHRY----GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 175 HEHNDWALKLFQQMKSSEINPNMFTY 200
H+ + A + +++ E++P+ Y
Sbjct: 602 HKDTNLARTVSEKL--FELDPDNVGY 625
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/743 (37%), Positives = 429/743 (57%), Gaps = 10/743 (1%)
Query: 32 VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAV-CFFKEMVLS 90
++ LV +Y GN +R FD I R V +WN + S Y E + CF M+ S
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 91 GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
G+ P+ + S++ AC D G KIH ++K G+ D++ A +L+ +Y++ + +A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
+F ++ D+ SWNA+I+G + AL L +++ + T S L AC
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEA 260
Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
G +H IK ++S+ V L+D+YA+ G + + + +F M ++LI+WN +I
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA-F 329
+ N + A SLF M + D TL ++ ++ I C+ V +++ F
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
D I N+++ Y K G V+ A +F D+++ ++I+ YAQ G EA+++Y
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 390 MQDR-EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
M++ EI + S+L AC+ A QG ++H ++K G D F SL +MY KCG
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
++DA F +IP V W+ +I HG G++A+ +F +ML++GV P+HIT V++L
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
AC+H+GLV E + FE M+ +GI P +HY CM+D+ GRAG+ + A++ + +M Q +A
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
S+WGALL A R++ NV++G+ A+E LF +EPE HVLLSN+YASAG W+ V ++R
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDL 688
L+K PG S +EV +KV F G+++H +E+Y +L + L GYVP L
Sbjct: 681 HGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVL 740
Query: 689 HDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSRE 748
DVE+ EKE +L HSE+LA+AF LIATP TIR+ KNLR+C DCH+ +FISKI RE
Sbjct: 741 QDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITERE 800
Query: 749 IIVRDVNRFHHFRNGSCSCGGYW 771
IIVRD NRFHHF+NG CSCG YW
Sbjct: 801 IIVRDSNRFHHFKNGVCSCGDYW 823
Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 260/491 (52%), Gaps = 27/491 (5%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VLKAC + D G ++H + + GF D +VA SL+ +Y++ ++R LFD +P R
Sbjct: 159 VLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRKIH 119
+ SWN++ S Y +EA+ + +G+R + ++ S+++AC +GD G IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
YSIK G +S++F +N L+D+YA+ G L D VF + D++SWN++I L+E
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHC------SLIKMEIKSDPI 233
A+ LFQ+M+ S I P+ T S L +LG C +L K D
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASI-----LSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
+G +V MYAK G +D AR +F+ +P ++I+WN +ISG+ QNG EA ++ M EG
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 294 -VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
+ +Q T +VL + + A+ ++H +K D ++V SL D YGKCG +EDA
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
+ +F + V+ V ++I + G GE+A+ L+ EM D + PD +LL+AC++
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 413 SAYEQGKQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA---DRAFSEIPDRGIVSW 468
++G+ + +G +V+MY + G ++ A ++ S PD I W
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI--W 623
Query: 469 SAMIGGLAQHG 479
A++ HG
Sbjct: 624 GALLSACRVHG 634
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 160/321 (49%), Gaps = 19/321 (5%)
Query: 189 KSSEINP--NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
+S EI+ +F Y + L++ + LH L+ + + + LV++Y G
Sbjct: 50 ESKEIDDVHTLFRYCTNLQS---------AKCLHARLVVSKQIQNVCISAKLVNLYCYLG 100
Query: 247 SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP-WMYREGVGFDQTTLSTVL 305
++ AR F + +++ AWN++ISG+ + G E F +M G+ D T +VL
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL 160
Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
K+ + + ++H L++K F D Y+ SLI Y + V +A +F E D+
Sbjct: 161 KAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217
Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
+ +MI+ Y Q G +EAL L ++ DS SLL+AC + +G +H +
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
IK G S+ F N L+++YA+ G + D + F + R ++SW+++I + + A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 486 QMFGQMLEDGVLPNHITLVSV 506
+F +M + P+ +TL+S+
Sbjct: 334 SLFQEMRLSRIQPDCLTLISL 354
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VL AC+ L G+++HG ++ G D FV SL MY KCG D+ LF IP +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
V WN+L +C+ E+AV FKEM+ G++P+ + ++++AC+ SG G+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
G + +VDMY + G LE A+ K + PD W A+++ C +H +
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 179 D 179
D
Sbjct: 637 D 637
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
+L C NL + K +H ++ + + LVN+Y G++ A F I +R
Sbjct: 59 TLFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQ-MLEDGVLPNHITLVSVLCACNHAGLVAEAKHH 522
+ +W+ MI G + G E ++ F ML G+ P++ T SVL AC ++ K H
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIH 173
Query: 523 FESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
+ KFG A +I + R A L D MP + S W A++
Sbjct: 174 --CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMI 223
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/814 (35%), Positives = 440/814 (54%), Gaps = 100/814 (12%)
Query: 29 DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC-YVHCDFLEEAVCFFKEM 87
D V SL + C N + ++SV N F+ VHC +
Sbjct: 2 DAPVPLSLSTLLELCTNLL----------QKSVNKSNGRFTAQLVHC-----------RV 40
Query: 88 VLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS----DMFSANALVDMYAK 143
+ SG+ + + +++++N + +G +L RK+ +D FS N ++ Y+K
Sbjct: 41 IKSGLMFSVYLMNNLMNVYSKTGYALHARKL--------FDEMPLRTAFSWNTVLSAYSK 92
Query: 144 VGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
G+++ F + D VSW +I G A+++ M I P FT T+
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG----------------- 246
L + A E G+++H ++K+ ++ + V L++MYAKCG
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 247 --------------SMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
MD A F M E++++ WN +ISG Q G D+ A +F M R+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 293 GV-GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVED 351
+ D+ TL++VL + A+ + + + KQ+H+ V T F+ ++N+LI Y +CG VE
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 352 AVKIFKESSAVDL---------------------------------VACTSMITAYAQFG 378
A ++ ++ DL VA T+MI Y Q G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
EA+ L+ M P+S+ +++L+ ++L++ GKQ+H +K G + N
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVL 497
+L+ MYAK G+I A RAF I +R VSW++MI LAQHG +EAL++F ML +G+
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 498 PNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
P+HIT V V AC HAGLV + + +F+ M+ I P HYACM+D+ GRAG QEA E
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
++ MP + + WG+LL A R++KN+++G+ AAE L +EPE S + L+N+Y++ G
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 632
Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
W+ AK+R+ MKD ++KKE G SWIEVK KV+ F V D +H EIY + ++ D + K
Sbjct: 633 WEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKK 692
Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
GYVP + LHD+EE KEQ+L HHSEKLA+AFGLI+TP T+R+ KNLR+C DCHT+
Sbjct: 693 MGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTA 752
Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
+FISK+V REIIVRD RFHHF++G CSC YW
Sbjct: 753 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 146/575 (25%), Positives = 258/575 (44%), Gaps = 99/575 (17%)
Query: 3 KACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVV 62
K+ F VH V+ +G ++ N+L+ +Y+K G + +R+LFD +P R+
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 63 SWNSLFSCYVH-------CDFLEE------------------------AVCFFKEMVLSG 91
SWN++ S Y C+F ++ A+ +MV G
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 92 IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
I P +F+L++++ + A + G+K+H + +KLG ++ +N+L++MYAK G+ A
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM----------------------- 188
VF + DI SWNA+IA + D A+ F+QM
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 189 ---------KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
+ S ++P+ FT S L ACA +E +G+Q+H ++ IV L+
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 240 DMYAKCGS---------------------------------MDEARMIFHLMPEKNLIAW 266
MY++CG M++A+ IF + +++++AW
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 267 NIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
+I G+ Q+G EA +LF M G + TL+ +L +S ++ KQ+H +VK
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLVACTSMITAYAQFGLGEEALK 385
+ + N+LI Y K G++ A + F D V+ TSMI A AQ G EEAL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS-LVNMY 444
L+ M + PD + +AC + QG+Q + + T + + +V+++
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 445 AKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQH 478
+ G + +A ++P + +V+W +++ H
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 145/613 (23%), Positives = 255/613 (41%), Gaps = 121/613 (19%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VL + + + + G +VH +V G + V+NSL+ MYAKCG+ + ++ +FD + R
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSG------------------- 91
+ SWN++ + ++ ++ A+ F++M ++SG
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 92 ---IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYA------ 142
+ P+ F+L+S+++ACA +G++IH + + G+D NAL+ MY+
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 143 ---------------------------KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
K+G++ A +F ++ D+V+W A+I G H
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG 235
A+ LF+ M PN +T + L + + G+Q+H S +K V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 236 VGLVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
L+ MYAK G++ A F L+ E++ ++W +I Q+G EA LF M EG+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
D T V F A HA V + D + +D K
Sbjct: 512 RPDHITY------VGVFSAC-----THAGLVNQGRQYFDMM--------------KDVDK 546
Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
I S AC M+ + + GL +EA + +M I PD SLL+AC
Sbjct: 547 IIPTLSH---YAC--MVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKN 598
Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWS 469
+ GK ++ ++ A ++L N+Y+ CG ++A + + D + SW
Sbjct: 599 IDLGKVAAERLLLLE-PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 470 AMIGGLAQHGRGKEALQMFGQMLEDGVLPN----HITLVSVLCACNHAGLVAEAKHHFES 525
+ K + +FG +EDG P ++T+ + G V +
Sbjct: 658 EV----------KHKVHVFG--VEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 705
Query: 526 MEKKFGIQPMQEH 538
+E++ Q ++ H
Sbjct: 706 LEEEVKEQILRHH 718
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/772 (35%), Positives = 444/772 (57%), Gaps = 5/772 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L+ C K D +H ++ G D F N L+ Y K G D+ LFD +PER+
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VS+ +L Y ++ + + + G N +S + + + +H
Sbjct: 115 NVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+KLGYDS+ F AL++ Y+ G+++ A VF+ I DIV W +++ V + + +
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
+LKL M+ + PN +T+ +ALKA G+ + + +H ++K DP VGVGL+
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
+Y + G M +A +F+ MP+ +++ W+ +I+ QNG EA LF M V ++ T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
LS++L A + G+ +Q+H L VK F+ D Y+ N+LID Y KC ++ AVK+F E S
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
+ + V+ ++I Y G G +A ++ E +++ SS L ACA+L++ + G Q
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGR 480
VH IK NSL++MYAKCG I A F+E+ + SW+A+I G + HG
Sbjct: 471 VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGL 530
Query: 481 GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYA 540
G++AL++ M + PN +T + VL C++AGL+ + + FESM + GI+P EHY
Sbjct: 531 GRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 541 CMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPE 600
CM+ +LGR+G+ +AM+L++ +P++ + +W A+L A+ N E + +AE + I P+
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK 650
Query: 601 KSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHAR 660
+T+VL+SN+YA A W NVA +R+ MK+ +KKEPG+SWIE + V+ F+VG H
Sbjct: 651 DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPD 710
Query: 661 SKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGA 720
K I L+ ++ +AGYVP L D+++ EK++ L+ HSE+LA+A+GL+ P
Sbjct: 711 MKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSR 770
Query: 721 T-IRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
I + KNLRIC DCH++ + IS IV R++++RD+NRFHHF G CSCG +W
Sbjct: 771 NRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 248/501 (49%), Gaps = 23/501 (4%)
Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
+M+ C D + + IH +K G D+F+ N L++ Y K G +DA+ +F ++
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113
Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQ 218
+ VS+ + G + + L+ ++ + E+NP++F TS LK ++ E+
Sbjct: 114 NNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVF--TSFLKLFVSLDKAEICPW 167
Query: 219 LHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGG 278
LH ++K+ S+ VG L++ Y+ CGS+D AR +F + K+++ W ++S +++NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 279 DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNS 338
++ L M G + T T LK+ A K VH +KT + D +
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 339 LIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD 398
L+ Y + G + DA K+F E D+V + MI + Q G EA+ L++ M++ + P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 399 SFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
F SS+LN CA G+Q+H ++K GF D + N+L+++YAKC +D A + F+
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 459 EIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVA 517
E+ + VSW+ +I G G G +A MF + L + V +T S L AC + A +
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 518 EAKHHFESME----KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGA 573
+ H +++ KK + +ID+ + G + A + + M + + W A
Sbjct: 468 GVQVHGLAIKTNNAKKVAVS------NSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNA 520
Query: 574 LLGAARIYKNVEVGQHAAEML 594
L+ Y +G+ A +L
Sbjct: 521 LISG---YSTHGLGRQALRIL 538
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 376 QFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
Q G + L LE D I DS ++L C + K +H I+K G D
Sbjct: 25 QCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84
Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
FA N L+N Y K G DA F E+P+R VS+ + G A
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/741 (37%), Positives = 422/741 (56%), Gaps = 61/741 (8%)
Query: 34 NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIR 93
N ++ Y + G F +R+LFD +PER +VSWN + YV L +A F+ M +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 94 PNEFSLSSMI-NACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
LS N C S+ R + S NAL+ Y + +E+A
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDV---------SWNALLSAYVQNSKMEEACM 209
Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
+FK E+ +VSWN ++ G V + A + F M ++ ++ + + A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGK 265
Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
+ RQL D +V Y + ++EAR +F MPE+N ++WN +++G
Sbjct: 266 IDEARQL----FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321
Query: 273 HLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
++Q G ME A FD + C+ V
Sbjct: 322 YVQ-GERMEMAKEL---------FD----------------VMPCRNVSTW--------- 346
Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
N++I Y +CG + +A +F + D V+ +MI Y+Q G EAL+L+++M+
Sbjct: 347 ----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 393 R--EINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
+N SF SS L+ CA++ A E GKQ+H ++K G+ + F GN+L+ MY KCGSI
Sbjct: 403 EGGRLNRSSF--SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
++A+ F E+ + IVSW+ MI G ++HG G+ AL+ F M +G+ P+ T+V+VL AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
+H GLV + + +F +M + +G+ P +HYACM+D+LGRAG ++A L+ MPF+ +A++
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
WG LLGA+R++ N E+ + AA+ +FA+EPE S +VLLSN+YAS+G W +V K+R M+D
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
+KK PG SWIE+++K +TF+VGD H EI+A L+E+ + KAGYV LHD
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
VEE EKE+++ +HSE+LAVA+G++ G IRV KNLR+C DCH + +++++I R II
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
+RD NRFHHF++GSCSCG YW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 9/214 (4%)
Query: 2 LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
L C L LG Q+HG +V G+++ FV N+L++MY KCG+ ++ LF + + +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 62 VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGY 121
VSWN++ + Y F E A+ FF+ M G++P++ ++ ++++AC+ +G GR+ + Y
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YFY 534
Query: 122 SIKLGY----DSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
++ Y +S ++ +VD+ + G LEDA + K++ PD W ++ +H
Sbjct: 535 TMTQDYGVMPNSQHYA--CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Query: 177 HNDWALKLFQQMKSSEI-NPNMFTYTSALKACAG 209
+ + A ++ + E N M+ S L A +G
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/568 (43%), Positives = 360/568 (63%)
Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
L+ CA + H +I+++++ D + L++ Y+KCG ++ AR +F M E++L
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
++WN +I + +N + EA +F M EG F + T+S+VL + CK++H L
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
SVKT + + Y+ +L+D Y KCG ++DAV++F+ V +SM+ Y Q EEA
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
L LY Q + + F SS++ AC+NL+A +GKQ+H I K GF S+ F +S V+M
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
YAKCGS+ ++ FSE+ ++ + W+ +I G A+H R KE + +F +M +DG+ PN +T
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF 367
Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
S+L C H GLV E + F+ M +G+ P HY+CM+DILGRAG EA EL+ ++P
Sbjct: 368 SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427
Query: 564 FQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAK 623
F AS+WG+LL + R+YKN+E+ + AAE LF +EPE + HVLLSNIYA+ W+ +AK
Sbjct: 428 FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 487
Query: 624 VRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPM 683
R+ ++D +KK G SWI++KDKV+TF+VG+ H R +EI + LD + K GY P
Sbjct: 488 SRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPS 547
Query: 684 VETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISK 743
VE +LHDVE +KE+LL HSEKLA+ FGL+ P + +R+ KNLRICVDCH + S
Sbjct: 548 VEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASM 607
Query: 744 IVSREIIVRDVNRFHHFRNGSCSCGGYW 771
R IIVRDVNRFHHF +G CSCG +W
Sbjct: 608 ATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 200/359 (55%), Gaps = 3/359 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L+ C + HG ++ + D + N L+ Y+KCG +R++FD + ERS
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+VSWN++ Y EA+ F EM G + +EF++SS+++AC + D+L +K+H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
S+K D +++ AL+D+YAK G ++DAV VF+ ++ V+W++++AG V +++ +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL L+++ + + N FT +S + AC+ + G+Q+H + K S+ V VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAKCGS+ E+ +IF + EKNL WN +ISG ++ E LF M ++G+ ++ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFK 357
S++L + ++ L ++T + +V + ++D G+ G + +A ++ K
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 207/396 (52%), Gaps = 8/396 (2%)
Query: 85 KEMVLSGIRPNEFSLSSMINA----CAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDM 140
+E V G NEFS ++++ CA +G + + HG I++ + D+ N L++
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105
Query: 141 YAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
Y+K G +E A VF + +VSWN +I + AL +F +M++ + FT
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 201 TSALKACAGMELKELG-RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
+S L AC G+ L ++LHC +K I + VG L+D+YAKCG + +A +F M
Sbjct: 166 SSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
+K+ + W+ +++G++QN EA L+ R + +Q TLS+V+ + ++ A+ KQ
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
+HA+ K+ F S+ ++ +S +D Y KCG + ++ IF E +L ++I+ +A+
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ-VHVHIIKFGFMSDTFAGN 438
+E + L+ +MQ ++P+ SSLL+ C + E+G++ + +G + +
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 439 SLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIG 473
+V++ + G + +A IP D W +++
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 16/339 (4%)
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
++ + +L+ A A+ K H ++ E D ++N LI+AY KCG VE A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA-NLSAY 415
LV+ +MI Y + + EAL ++LEM++ F SS+L+AC N A
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
E K++H +K + + G +L+++YAKCG I DA + F + D+ V+WS+M+ G
Sbjct: 180 E-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238
Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQP 534
Q+ +EAL ++ + + N TL SV+CAC N A L+ + H + FG
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298
Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL-GAARIYKNVEVGQHAAEM 593
A +D+ + G +E+ + + + N +W ++ G A+ + EV M
Sbjct: 299 FVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEV------M 349
Query: 594 LFAIEPEKSSTH---VLLSNIYASAGMWDNVAKVRRFMK 629
+ + ++ H V S++ + G V + RRF K
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/741 (36%), Positives = 420/741 (56%), Gaps = 33/741 (4%)
Query: 64 WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
+NSL Y EA+ F M+ SGI P++++ ++ACA S G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
K+GY D+F N+LV YA+ G L+ A VF ++ ++VSW ++I G + A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 184 LFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
LF +M + E+ PN T + ACA +E E G +++ + I+ + ++ LVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
KC ++D A+ +F NL N + S +++ G EA +F M GV D+ ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
+ + S + + I K H ++ FES D I N+LID Y KC + A +IF S
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 363 DLVACTSMITAYAQFG-------------------------------LGEEALKLYLEMQ 391
+V S++ Y + G L EEA++++ MQ
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 392 DRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
+E +N D S+ +AC +L A + K ++ +I K G D G +LV+M+++CG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
+ A F+ + +R + +W+A IG +A G + A+++F M+E G+ P+ + V L AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 511 NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASV 570
+H GLV + K F SM K G+ P HY CM+D+LGRAG +EA++L++ MP + N +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 571 WGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKD 630
W +LL A R+ NVE+ +AAE + + PE++ ++VLLSN+YASAG W+++AKVR MK+
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 631 NKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHD 690
L+K PG S I+++ K + FT GD SH I A LDEVS + G+VP + L D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761
Query: 691 VEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREII 750
V+E EK +L HSEKLA+A+GLI++ G TIR+ KNLR+C DCH+ +F SK+ +REII
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821
Query: 751 VRDVNRFHHFRNGSCSCGGYW 771
+RD NRFH+ R G CSCG +W
Sbjct: 822 LRDNNRFHYIRQGKCSCGDFW 842
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 33/391 (8%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V+ AC +DL G +V+ + +G + ++ + ++LV MY KC ++RLFD +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+ N++ S YV EA+ F M+ SG+RP+ S+ S I++C+ + L G+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
Y ++ G++S NAL+DMY K + A +F + + +V+WN+++AG V
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 174 -------LHEHN--DW---------------ALKLFQQMKSSE-INPNMFTYTSALKACA 208
+ E N W A+++F M+S E +N + T S AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
+ +L + ++ + K I+ D +G LVDM+++CG + A IF+ + +++ AW
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT- 327
I G A LF M +G+ D L + + + K++ +K
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
+D ++D G+ G +E+AV++ ++
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 503 bits (1296), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/661 (39%), Positives = 385/661 (58%), Gaps = 3/661 (0%)
Query: 114 LGRKIHGYSIK-LGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
LGR +H +K L F AN L++MY+K+ + E A V + ++VSW ++I+G
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
+ H AL F +M+ + PN FT+ A KA A + L G+Q+H +K D
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
VG DMY K D+AR +F +PE+NL WN IS + +G EA F R
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
+ T L + + + + + Q+H L +++ F++D + N LID YGKC + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
IF E + V+ S++ AY Q E+A LYL + + F+ SS+L+ACA +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMI 472
+ E G+ +H H +K F G++LV+MY KCG I+D+++AF E+P++ +V+ +++I
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 473 GGLAQHGRGKEALQMFGQMLEDGV--LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKF 530
GG A G+ AL +F +M G PN++T VS+L AC+ AG V F+SM +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHA 590
GI+P EHY+C++D+LGRAG + A E + MP Q SVWGAL A R++ ++G A
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 591 AEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYT 650
AE LF ++P+ S HVLLSN +A+AG W VR +K +KK G SWI VK++V+
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 563
Query: 651 FTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVA 710
F DRSH +KEI L ++ + + AGY P ++ L+D+EE EK + HHSEKLA+A
Sbjct: 564 FQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALA 623
Query: 711 FGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGY 770
FGL++ P IR+ KNLRIC DCH+ F+F+S V REIIVRD NRFH F++G CSC Y
Sbjct: 624 FGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDY 683
Query: 771 W 771
W
Sbjct: 684 W 684
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 265/549 (48%), Gaps = 29/549 (5%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDE--FVANSLVVMYAKCGNFIDSRRLFDAIPE 58
+LK S + LG VH +V T DS F+AN L+ MY+K + +R + P
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI 118
R+VVSW SL S A+ F EM G+ PN+F+ A A + G++I
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
H ++K G D+F + DMY K +DA +F +I ++ +WNA I+ V
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
A++ F + + + +PN T+ + L AC+ LG QLH +++ +D V GL
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+D Y KC + + +IF M KN ++W +++ ++QN D +A+ L+ ++ V
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
+S+VL + A + + + +HA +VK E ++ ++L+D YGKCG +ED+ + F E
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPD----SFVCSSLLNACANLSA 414
+LV S+I YA G + AL L+ EM R P +FV SLL+AC+ A
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV--SLLSACSRAGA 428
Query: 415 YEQGKQVHVHIIKFGFMSDTFA-------GNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
E G ++ F M T+ + +V+M + G ++ A ++P + +S
Sbjct: 429 VENGMKI------FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482
Query: 468 -WSAMIGGLAQHGRGKEALQMFGQM--LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFE 524
W A+ HG+ + L + L+ NH+ L + A AG AEA E
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA---AGRWAEANTVRE 539
Query: 525 SMEKKFGIQ 533
+ K GI+
Sbjct: 540 EL-KGVGIK 547
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/709 (36%), Positives = 404/709 (56%), Gaps = 35/709 (4%)
Query: 94 PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
P F +++++A A S R++ + ++FS N L+ Y+K G + + +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEMEST 94
Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMEL 212
F+ + D V+WN +I G L A+K + M + N T + LK +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI-------- 264
LG+Q+H +IK+ +S +VG L+ MYA G + +A+ +F+ + ++N +
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 265 ----------------------AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
+W +I G QNG EA F M +G+ DQ
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAV 362
+VL + AI KQ+HA ++T F+ Y+ ++LID Y KC + A +F
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 363 DLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH 422
++V+ T+M+ Y Q G EEA+K++L+MQ I+PD + ++ACAN+S+ E+G Q H
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 423 VHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGK 482
I G + NSLV +Y KCG IDD+ R F+E+ R VSW+AM+ AQ GR
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 483 EALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACM 542
E +Q+F +M++ G+ P+ +TL V+ AC+ AGLV + + +F+ M ++GI P HY+CM
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Query: 543 IDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
ID+ R+G+ +EAM ++ MPF +A W LL A R N+E+G+ AAE L ++P
Sbjct: 515 IDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 574
Query: 603 STHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSK 662
+ + LLS+IYAS G WD+VA++RR M++ +KKEPG SWI+ K K+++F+ D S
Sbjct: 575 AGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLD 634
Query: 663 EIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATI 722
+IYAKL+E+++ + GY P HDVEE+ K ++L +HSE+LA+AFGLI P G I
Sbjct: 635 QIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPI 694
Query: 723 RVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
RV KNLR+CVDCH + + IS + REI+VRD RFH F++G+CSCG +W
Sbjct: 695 RVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 253/516 (49%), Gaps = 40/516 (7%)
Query: 31 FVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLS 90
F N+L++ Y+K G + F+ +P+R V+WN L Y + AV + M+
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 91 -GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV----- 144
+L +M+ + +G LG++IHG IKLG++S + + L+ MYA V
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 145 --------------------------GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
G +EDA+ +F+ +E D VSW A+I G +
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLA 251
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
A++ F++MK + + + + S L AC G+ G+Q+H +I+ + VG L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+DMY KC + A+ +F M +KN+++W ++ G+ Q G EA +F M R G+ D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
TL + + A+ ++ Q H ++ + + NSL+ YGKCG ++D+ ++F E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
+ D V+ T+M++AYAQFG E ++L+ +M + PD + +++AC+ E+G
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 419 KQ-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLA 476
++ + ++G + + +++++++ G +++A R + +P + W+ ++
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 477 QHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCA 509
G GK A + ++ D P TL+S + A
Sbjct: 552 NKGNLEIGKWAAESLIEL--DPHHPAGYTLLSSIYA 585
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 206/454 (45%), Gaps = 73/454 (16%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+LK +S + LG Q+HG V+ GF+S V + L+ MYA G D++++F + +R+
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 61 VVSWNSLFSCYVHCDFLE------------------------------EAVCFFKEMVLS 90
V +NSL + C +E EA+ F+EM +
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 91 GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDA 150
G++ +++ S++ AC G G G++IH I+ + ++ +AL+DMY K L A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 151 VAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGM 210
VF ++ ++VSW A++ G + A+K+F M+ S I+P+ +T A+ ACA +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 211 ELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
E G Q H I + V LV +Y KCG +D++ +F+ M ++ ++W ++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
S + Q G +E LF M + G+ D TL+ V
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV-------------------------- 478
Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFK-ESSAVDLVAC----TSMITAYAQFGLGEEALK 385
I A + G VE + FK +S +V + MI +++ G EEA++
Sbjct: 479 ---------ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 386 LYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
+ PD+ ++LL+AC N E GK
Sbjct: 530 F---INGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 130/324 (40%), Gaps = 72/324 (22%)
Query: 318 KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQF 377
K +H ++ + ++ N+++ AY A ++F +L + +++ AY++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 378 GLGEEALKLYLEMQDRE-----INPDSFVCSSLLNAC------------ANLSA------ 414
GL E + ++ DR+ + + + S L+ A ANL+
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 415 ---------YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
GKQ+H +IK GF S G+ L+ MYA G I DA + F + DR
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 466 ------------------------------VSWSAMIGGLAQHGRGKEALQMFGQMLEDG 495
VSW+AMI GLAQ+G KEA++ F +M G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 496 VLPNHITLVSVLCACNHAGLVAEAKH-HFESMEKKFGIQPMQEHY---ACMIDILGRAGK 551
+ + SVL AC G + E K H + F Q+H + +ID+ +
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF-----QDHIYVGSALIDMYCKCKC 320
Query: 552 FQEAMELVDTMPFQANASVWGALL 575
A + D M Q N W A++
Sbjct: 321 LHYAKTVFDRMK-QKNVVSWTAMV 343
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 15/235 (6%)
Query: 406 LNACANLSAYEQG---KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPD 462
+ C L A Q K +H +II+ +TF N++V+ YA S A R F IP
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 463 RGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKH 521
+ SW+ ++ ++ G E F ++ + DGV N ++ + +GLV A
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWN-----VLIEGYSLSGLVGAAVK 124
Query: 522 HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMEL---VDTMPFQANASVWGALLGAA 578
+ +M + F + M+ + G ++ V + F++ V LL
Sbjct: 125 AYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL--- 181
Query: 579 RIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKL 633
+Y NV A ++ + ++ + + L + GM ++ ++ R M+ + +
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/727 (35%), Positives = 421/727 (57%), Gaps = 7/727 (0%)
Query: 48 DSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACA 107
D+ +LFD + + WN + + C EAV F+ MV +G++ + F+ +I + A
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 108 GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNA 167
G G+KIH IKLG+ SD++ N+L+ +Y K+G DA VF+++ DIVSWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 168 VIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME 227
+I+G + +L LF++M P+ F+ SAL AC+ + ++G+++HC ++
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 228 IKS-DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
I++ D +V ++DMY+K G + A IF+ M ++N++AWN++I + +NG +A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 287 PWMYRE-GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGK 345
M + G+ D T +L + A + + +H +++ F + +LID YG+
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 346 CGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
CG ++ A IF + ++++ S+I AY Q G AL+L+ E+ D + PDS +S+
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 406 LNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
L A A + +G+++H +I+K + S+T NSLV+MYA CG ++DA + F+ I + +
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 466 VSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFES 525
VSW+++I A HG G+ ++ +F +M+ V PN T S+L AC+ +G+V E +FES
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFES 557
Query: 526 MEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVE 585
M++++GI P EHY CM+D++GR G F A ++ MPF A +WG+LL A+R +K++
Sbjct: 558 MKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDIT 617
Query: 586 VGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVK 645
+ + AAE +F +E + + +VLL N+YA AG W++V +++ M+ + + S +E K
Sbjct: 618 IAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Query: 646 DKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG-YVPMVETDLHDVEESEKEQLLYHHS 704
K + FT GDRSH + +IY LD VS ++ + YV V + + HS
Sbjct: 678 GKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHS 737
Query: 705 EKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGS 764
+LA FGLI+T G + V+ N RIC CH E S++ REI+V D FHHF NG
Sbjct: 738 VRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGR 797
Query: 765 CSCGGYW 771
CSCG YW
Sbjct: 798 CSCGNYW 804
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 251/464 (54%), Gaps = 7/464 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V+K+ L G ++H +V+ GF SD +V NSL+ +Y K G D+ ++F+ +PER
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+VSWNS+ S Y+ ++ FKEM+ G +P+ FS S + AC+ +G++IH
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 121 YSIKLGYDS-DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
++++ ++ D+ +++DMY+K G + A +F + +IV+WN +I +
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 180 WALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
A FQ+M + + + P++ T + L A A +E GR +H ++ ++ L
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETAL 371
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+DMY +CG + A +IF M EKN+I+WN +I+ ++QNG + A LF ++ + D
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
TT++++L + A ++ +++HA VK+ + S+ I+NSL+ Y CG +EDA K F
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
D+V+ S+I AYA G G ++ L+ EM +NP+ +SLL AC+ ++G
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 419 KQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP 461
+ + + +G ++++ + G+ A R E+P
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 204/379 (53%), Gaps = 12/379 (3%)
Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAG---CVLHEHNDWALKLFQQMKSSEINPNMFTYTSA 203
+EDA+ +F ++ D WN +I G C L+ A++ + +M + + + FTY
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE---AVQFYSRMVFAGVKADTFTYPFV 136
Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
+K+ AG+ E G+++H +IK+ SD V L+ +Y K G +A +F MPE+++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
++WN +ISG+L G + LF M + G D+ + + L + + + + K++H
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Query: 324 SVKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEE 382
+V++ E+ D +V S++D Y K G V A +IF ++VA MI YA+ G +
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD 316
Query: 383 ALKLYLEMQDRE-INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV 441
A + +M ++ + PD +LL A A L +G+ +H + ++ GF+ +L+
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALI 372
Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHI 501
+MY +CG + A+ F + ++ ++SW+++I Q+G+ AL++F ++ + ++P+
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432
Query: 502 TLVSVLCACNHAGLVAEAK 520
T+ S+L A + ++E +
Sbjct: 433 TIASILPAYAESLSLSEGR 451
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 182/350 (52%), Gaps = 9/350 (2%)
Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
+DP + L +A M++A +F M + + WN++I G G +EA + M
Sbjct: 63 NDPALTRALRG-FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
GV D T V+KSVA ++ K++HA+ +K F SD Y+ NSLI Y K G
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC 409
DA K+F+E D+V+ SMI+ Y G G +L L+ EM PD F S L AC
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 410 ANLSAYEQGKQVHVHIIKFGFMS-DTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
+++ + + GK++H H ++ + D S+++MY+K G + A+R F+ + R IV+W
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 469 SAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
+ MIG A++GR +A F +M E +G+ P+ IT +++L A + ++ H +M
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMR 358
Query: 528 KKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
+ G P +ID+ G G+ + A + D M + N W +++ A
Sbjct: 359 R--GFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/723 (34%), Positives = 399/723 (55%), Gaps = 70/723 (9%)
Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
H +K G +D + + L+ Y+ DA V + I P I S++++I +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
++ +F +M S + P+ + K CA + ++G+Q+HC + D V +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 239 VDMYAKCGSMDEARMIFHLMPEK-----------------------------------NL 263
MY +CG M +AR +F M +K N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
++WN ++SG ++G EA +F ++ G DQ T+S+VL SV + + + + +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF--------------------------- 356
+K D +++++ID YGK GHV + +F
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 357 --------KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNA 408
+++ +++V+ TS+I AQ G EAL+L+ EMQ + P+ S+L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 409 CANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSW 468
C N++A G+ H ++ + + G++L++MYAKCG I+ + F+ +P + +V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 469 SAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEK 528
++++ G + HG+ KE + +F ++ + P+ I+ S+L AC GL E +F+ M +
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 529 KFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQ 588
++GI+P EHY+CM+++LGRAGK QEA +L+ MPF+ ++ VWGALL + R+ NV++ +
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 589 HAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKV 648
AAE LF +EPE T+VLLSNIYA+ GMW V +R M+ LKK PG SWI+VK++V
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRV 637
Query: 649 YTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLA 708
YT GD+SH + +I K+DE+S + K+G+ P ++ LHDVEE E+EQ+L+ HSEKLA
Sbjct: 638 YTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLA 697
Query: 709 VAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
V FGL+ TP G ++V KNLRIC DCH +FIS REI +RD NRFHHF++G CSCG
Sbjct: 698 VVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCG 757
Query: 769 GYW 771
+W
Sbjct: 758 DFW 760
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 227/529 (42%), Gaps = 72/529 (13%)
Query: 16 QVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCD 75
Q H ++ +G +D +++ L+ Y+ F D+ + +IP+ ++ S++SL
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 76 FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
+++ F M G+ P+ L ++ CA +G++IH S G D D F
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPD---------------------------------- 161
++ MY + G + DA VF + D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 162 -IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
IVSWN +++G ++ A+ +FQ++ P+ T +S L + E+ +GR +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGS-------------------------------MD 249
+IK + D V ++DMY K G +D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 250 EARMIFHLMPEK----NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVL 305
+A +F L E+ N+++W +I+G QNG D+EA LF M GV + T+ ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 306 KSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLV 365
+ + A+G + H +V+ + ++ ++LID Y KCG + + +F +LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 366 ACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVH 424
S++ ++ G +E + ++ + + PD +SLL+AC + ++G K +
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 425 IIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMI 472
++G + +VN+ + G + +A E+P + W A++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 206/484 (42%), Gaps = 113/484 (23%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+ K C +G Q+H + +G D D FV S+ MY +CG D+R++FD + ++
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKD 181
Query: 61 VV-----------------------------------SWNSLFSCYVHCDFLEEAVCFFK 85
VV SWN + S + + +EAV F+
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 86 EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
++ G P++ ++SS++ + S +GR IHGY IK G D +A++DMY K G
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 146 NLEDAVAVFKDIE-----------------------------------HPDIVSWNAVIA 170
++ +++F E ++VSW ++IA
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 171 GCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKS 230
GC + + AL+LF++M+ + + PN T S L AC + GR H +++ +
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 231 DPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMY 290
+ VG L+DMYAKCG ++ ++++F++MP KNL+ WN +++G +G E S+F +
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 291 REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
R T + D SL+ A G+ G +
Sbjct: 482 R-----------------------------------TRLKPDFISFTSLLSACGQVGLTD 506
Query: 351 DAVKIFKESS-----AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSL 405
+ K FK S L + M+ + G +EA L EM PDS V +L
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGAL 563
Query: 406 LNAC 409
LN+C
Sbjct: 564 LNSC 567
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 40/319 (12%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIP--- 57
VL + + L +G +HG V+ G D+ V ++++ MY K G+ LF+
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317
Query: 58 --------------------------------ERSVVSWNSLFSCYVHCDFLEEAVCFFK 85
E +VVSW S+ + EA+ F+
Sbjct: 318 AGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFR 377
Query: 86 EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
EM ++G++PN ++ SM+ AC GR HG+++++ ++ +AL+DMYAK G
Sbjct: 378 EMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
+ + VF + ++V WN+++ G +H + +F+ + + + P+ ++TS L
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 206 ACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGLVDMYAKCGSMDEARMIFHLMP-EKN 262
AC + L + G + + ++ E P + +V++ + G + EA + MP E +
Sbjct: 498 ACGQVGLTDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPD 556
Query: 263 LIAWNIVI-SGHLQNGGDM 280
W ++ S LQN D+
Sbjct: 557 SCVWGALLNSCRLQNNVDL 575
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
Q HA +K+ ++D YI LI +Y DA + + + + +S+I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGN 438
L +++ ++ M + PDS V +L CA LSA++ GKQ+H G D F
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 439 SLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLP 498
S+ +MY +CG + DA + F + D+ +V+ SA++ A+ G +E +++ +M G+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
N ++ +L N +G EA F+ + G P Q
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQ 252
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L AC + L G HG V + V ++L+ MYAKCG S+ +F+ +P ++
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRK-IH 119
+V WNSL + + +E + F+ ++ + ++P+ S +S+++AC G + G K
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
S + G + + +V++ + G L++A + K++ PD W A++ C L +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 179 DWALKLFQQMKSSEI-NPNMFTYTSALKACAGM 210
D A +++ E NP + S + A GM
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/585 (41%), Positives = 373/585 (63%), Gaps = 3/585 (0%)
Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
++ S I + Y + LK C +L GR +H +++ + D ++G L++MYAKCGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKS 307
++EAR +F MP+++ + W +ISG+ Q+ +A F M R G ++ TLS+V+K+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 308 VASFQAIGVC-KQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
A+ + G C Q+H VK F+S+ ++ ++L+D Y + G ++DA +F + + V+
Sbjct: 171 AAA-ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
++I +A+ E+AL+L+ M P F +SL AC++ EQGK VH ++I
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
K G FAGN+L++MYAK GSI DA + F + R +VSW++++ AQHG GKEA+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
F +M G+ PN I+ +SVL AC+H+GL+ E H++E M KK GI P HY ++D+L
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLL 408
Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
GRAG A+ ++ MP + A++W ALL A R++KN E+G +AAE +F ++P+ HV
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
+L NIYAS G W++ A+VR+ MK++ +KKEP SW+E+++ ++ F D H + +EI
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKK 726
K +EV + + GYVP + V++ E+E L +HSEK+A+AF L+ TPPG+TI +KK
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 727 NLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
N+R+C DCHT+ + SK+V REIIVRD NRFHHF++G+CSC YW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 260/558 (46%), Gaps = 59/558 (10%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+LK CT K L G VH ++ + F D + N+L+ MYAKCG+ ++R++F+ +P+R
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
V+W +L S Y D +A+ FF +M+ G PNEF+LSS+I A A G ++HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ +K G+DS++ +AL+D+Y + G ++DA VF +E + VSWNA+IAG +
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL+LFQ M P+ F+Y S AC+ E G+ +H +IK K G L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAK GS+ +AR IF + ++++++WN +++ + Q+G EA F M R G+ ++ +
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
+VL + + + + L K + + +++D G+ G + A++ +E
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQ 420
I P + + +LLNAC E G
Sbjct: 426 ----------------------------------IEPTAAIWKALLNACRMHKNTELGAY 451
Query: 421 VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAMIGGL 475
H+ + D L N+YA G +DA R ++ + G+ SW +
Sbjct: 452 AAEHVFELD-PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI---- 506
Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLV----SVLCACNHAGLVAEAKH---HFESMEK 528
+ A+ MF + D P + VL G V + H H + E+
Sbjct: 507 ------ENAIHMF--VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQER 558
Query: 529 KFGIQPMQEHYACMIDIL 546
+ +Q E A +L
Sbjct: 559 EVNLQYHSEKIALAFALL 576
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 1/380 (0%)
Query: 100 SSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH 159
++++ C + GR +H + ++ + D+ N L++MYAK G+LE+A VF+ +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 160 PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQL 219
D V+W +I+G H+ AL F QM +PN FT +S +KA A G QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 220 HCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGD 279
H +K S+ VG L+D+Y + G MD+A+++F + +N ++WN +I+GH + G
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 280 MEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
+A LF M R+G + +++ + +S + K VHA +K+ + + N+L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
+D Y K G + DA KIF + D+V+ S++TAYAQ G G+EA+ + EM+ I P+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
S+L AC++ ++G + + K G + + + ++V++ + G ++ A R E
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 460 IPDRGIVS-WSAMIGGLAQH 478
+P + W A++ H
Sbjct: 424 MPIEPTAAIWKALLNACRMH 443
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
+++ I D ++LL C QG+ VH HI++ F D GN+L+NMYAKCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
S+++A + F ++P R V+W+ +I G +QH R +AL F QML G PN TL SV+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 509 ACNHAGLVAEAK----HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPF 564
A AE + H K G + ++D+ R G +A + D +
Sbjct: 170 AA-----AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 565 QANASVWGALL-GAAR 579
+ + S W AL+ G AR
Sbjct: 225 RNDVS-WNALIAGHAR 239
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/769 (33%), Positives = 440/769 (57%), Gaps = 4/769 (0%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+++ C K+ G +V+ I + + + N+ + M+ + GN +D+ +F + ER+
Sbjct: 100 LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERN 159
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMV-LSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
+ SWN L Y + +EA+C + M+ + G++P+ ++ ++ C G D G+++H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
+ ++ GY+ D+ NAL+ MY K G+++ A +F + DI+SWNA+I+G +
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
L+LF M+ ++P++ T TS + AC + + LGR +H +I D V L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
MY GS EA +F M K++++W +ISG+ N +A + M ++ V D+
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
T++ VL + A+ + ++H L++K S + N+LI+ Y KC ++ A+ IF
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
++++ TS+I EAL ++L + P++ ++ L ACA + A GK
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGK 518
Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
++H H+++ G D F N+L++MY +CG ++ A F+ + + SW+ ++ G ++ G
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERG 577
Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
+G +++F +M++ V P+ IT +S+LC C+ + +V + +F ME +G+ P +HY
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHY 636
Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
AC++D+LGRAG+ QEA + + MP + +VWGALL A RI+ +++G+ +A+ +F ++
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDK 696
Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
+ ++LL N+YA G W VAKVRR MK+N L + G SW+EVK KV+ F D+ H
Sbjct: 697 KSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHP 756
Query: 660 RSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPG 719
++KEI L+ + +++ G + E+ D E ++++ HSE+ A+AFGLI T PG
Sbjct: 757 QTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPG 816
Query: 720 ATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCG 768
I V KNL +C +CH + +FISK V REI VRD FHHF++G CSCG
Sbjct: 817 MPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCG 865
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 210/418 (50%), Gaps = 5/418 (1%)
Query: 77 LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFS--A 134
LEEA+ M + +E +++ C G K+ YSI L S +
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKV--YSIALSSMSSLGVELG 132
Query: 135 NALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEI 193
NA + M+ + GNL DA VF + ++ SWN ++ G + D A+ L+ +M +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
P+++T+ L+ C G+ G+++H +++ + D V L+ MY KCG + AR+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
+F MP +++I+WN +ISG+ +NG E LF M V D TL++V+ +
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
+ + +HA + T F D + NSL Y G +A K+F D+V+ T+MI+
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
Y L ++A+ Y M + PD +++L+ACA L + G ++H IK +S
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
N+L+NMY+KC ID A F IP + ++SW+++I GL + R EAL QM
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 198/406 (48%), Gaps = 13/406 (3%)
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
A+KL M+ + + + + ++ C +E G +++ + +G +
Sbjct: 78 AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQT 299
M+ + G++ +A +F M E+NL +WN+++ G+ + G EA L+ M + GV D
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
T VL++ + K+VH V+ +E D +VN+LI Y KCG V+ A +F
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
D+++ +MI+ Y + G+ E L+L+ M+ ++PD +S+++AC L G+
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
+H ++I GF D NSL MY GS +A++ FS + + IVSW+ MI G +
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG-LVAEAKHHFESMEKKFGIQPMQEH 538
+A+ + M +D V P+ IT+ +VL AC G L + H K I+
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH------KLAIKARLIS 431
Query: 539 YAC----MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
Y +I++ + +A+++ +P + N W +++ R+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRL 476
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/692 (38%), Positives = 400/692 (57%), Gaps = 36/692 (5%)
Query: 116 RKIHGYSIKLGYDSDMFSANALVD---MYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGC 172
R IH IK+G + ++ + L++ + L A++VFK I+ P+++ WN + G
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 173 VLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
L ALKL+ M S + PN +T+ LK+CA + + G+Q+H ++K+ D
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 233 IVGVGLVDMYAKCGSMDEARMIFHL-------------------------------MPEK 261
V L+ MY + G +++A +F +P K
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 262 NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVH 321
++++WN +ISG+ + G EA LF M + V D++T+ TV+ + A +I + +QVH
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 322 ALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGE 381
F S+ IVN+LID Y KCG +E A +F+ D+++ ++I Y L +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 382 EALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF--GFMSDTFAGNS 439
EAL L+ EM P+ S+L ACA+L A + G+ +HV+I K G + + S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPN 499
L++MYAKCG I+ A + F+ I + + SW+AMI G A HGR + +F +M + G+ P+
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 500 HITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELV 559
IT V +L AC+H+G++ +H F +M + + + P EHY CMID+LG +G F+EA E++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 560 DTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWD 619
+ M + + +W +LL A +++ NVE+G+ AE L IEPE ++VLLSNIYASAG W+
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 620 NVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAG 679
VAK R + D +KK PG S IE+ V+ F +GD+ H R++EIY L+E+ LL KAG
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Query: 680 YVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
+VP L ++EE KE L HHSEKLA+AFGLI+T PG + + KNLR+C +CH + +
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709
Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
ISKI REII RD RFHHFR+G CSC YW
Sbjct: 710 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 261/581 (44%), Gaps = 86/581 (14%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDS----------- 49
VLK+C K G Q+HG V+ G D D +V SL+ MY + G D+
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 50 --------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
++LFD IP + VVSWN++ S Y +EA+ FK+M+
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 90 SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
+ +RP+E ++ ++++ACA SG LGR++H + G+ S++ NAL+D+Y+K G LE
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
A +F+ + + D++SWN +I G AL LFQ+M S PN T S L ACA
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 210 MELKELGRQLHCSLIKM--EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWN 267
+ ++GR +H + K + + + L+DMYAKCG ++ A +F+ + K+L +WN
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 268 IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
+I G +G + LF M + G+ D T +L + + + + + + +T
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI----FRT 495
Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
+ DY + ++ YG +DL+ + + +
Sbjct: 496 M--TQDYKMTPKLEHYG---------------CMIDLLGHSGLFKEAEE----------- 527
Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK--------FGFMSDTFAGNS 439
+ E+ PD + SLL AC E G+ ++IK + +S+ +A
Sbjct: 528 -MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAM----IGGLAQHGRGKEALQMFGQM---L 492
N AK ++ + D+ ++P + ++ I G H R +E M +M L
Sbjct: 587 RWNEVAKTRALLN-DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 493 ED-GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGI 532
E G +P+ VL +HH E + FG+
Sbjct: 646 EKAGFVPD---TSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 192/403 (47%), Gaps = 33/403 (8%)
Query: 52 LFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGD 111
+F I E +++ WN++F + A+ + M+ G+ PN ++ ++ +CA S
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 112 SLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEH------------ 159
G++IHG+ +KLG D D++ +L+ MY + G LEDA VF H
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 160 -------------------PDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
D+VSWNA+I+G + AL+LF+ M + + P+ T
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 201 TSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPE 260
+ + ACA ELGRQ+H + S+ + L+D+Y+KCG ++ A +F +P
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 261 KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV 320
K++I+WN +I G+ EA LF M R G + T+ ++L + A AI + + +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 321 HALSVK--TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
H K + + SLID Y KCG +E A ++F L + +MI +A G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
+ + L+ M+ I PD LL+AC++ + G+ +
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/692 (38%), Positives = 391/692 (56%), Gaps = 36/692 (5%)
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYA--KVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV 173
++ HG+ I+ G SD +SA+ L M A +LE A VF +I P+ +WN +I
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 174 LHEHNDWALKLFQQMKS-SEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
++ F M S S+ PN +T+ +KA A + LG+ LH +K + SD
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
V L+ Y CG +D A +F + EK++++WN +I+G +Q G +A LF M E
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 293 GVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDA 352
V T+ VL + A + + +QV + + + + N+++D Y KCG +EDA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 353 VKIF---KESSAV----------------------------DLVACTSMITAYAQFGLGE 381
++F +E V D+VA ++I+AY Q G
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 382 EALKLYLEMQ-DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
EAL ++ E+Q + + + S L+ACA + A E G+ +H +I K G + ++L
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
++MY+KCG ++ + F+ + R + WSAMIGGLA HG G EA+ MF +M E V PN
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 501 ITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVD 560
+T +V CAC+H GLV EA+ F ME +GI P ++HYAC++D+LGR+G ++A++ ++
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Query: 561 TMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDN 620
MP + SVWGALLGA +I+ N+ + + A L +EP HVLLSNIYA G W+N
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 621 VAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGY 680
V+++R+ M+ LKKEPG S IE+ ++ F GD +H S+++Y KL EV + L GY
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
Query: 681 VPMVETDLHDVEESE-KEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFE 739
P + L +EE E KEQ L HSEKLA+ +GLI+T IRV KNLR+C DCH+ +
Sbjct: 647 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 706
Query: 740 FISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
IS++ REIIVRD RFHHFRNG CSC +W
Sbjct: 707 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 273/566 (48%), Gaps = 50/566 (8%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYA--KCGNFIDSRRLFDAIPE 58
+++ C S + L Q HG ++ TG SD + A+ L M A + +R++FD IP+
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL-SGIRPNEFSLSSMINACAGSGDSLLGRK 117
+ +WN+L Y ++ F +MV S PN+++ +I A A LG+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
+HG ++K SD+F AN+L+ Y G+L+ A VF I+ D+VSWN++I G V
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKM-EIKSDPIVGV 236
D AL+LF++M+S ++ + T L ACA + E GRQ+ CS I+ + + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV-CSYIEENRVNVNLTLAN 271
Query: 237 GLVDMYAKCGSMDEARMIF-------------------------------HLMPEKNLIA 265
++DMY KCGS+++A+ +F + MP+K+++A
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 266 WNIVISGHLQNGGDMEAASLF-PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
WN +IS + QNG EA +F ++ + +Q TL + L + A A+ + + +H+
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
K + ++ ++LI Y KCG +E + ++F D+ ++MI A G G EA+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV-HVHIIKFGFMSDTFAGNSLVNM 443
++ +MQ+ + P+ +++ AC++ ++ + + H +G + + +V++
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 444 YAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLE-----DGVL 497
+ G ++ A + +P S W A++G H A ++LE DG
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA- 570
Query: 498 PNHITLVSVLCACNHAGLVAEAKHHF 523
H+ L ++ V+E + H
Sbjct: 571 --HVLLSNIYAKLGKWENVSELRKHM 594
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/689 (37%), Positives = 410/689 (59%), Gaps = 22/689 (3%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+LK C+ +D LG+Q+HGIVV G D+D A++L+ MYAK F++S R+F IPE++
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VSW+++ + V + L A+ FFKEM ++ +S++ +CA + LG ++H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+++K + +D A +DMYAK N++DA +F + E+ + S+NA+I G EH
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL LF ++ SS + + + + +ACA ++ G Q++ IK + D V +D
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MY KC ++ EA +F M ++ ++WN +I+ H QNG E LF M R + D+ T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI---FK 357
++LK+ ++G ++H+ VK+ S+ + SLID Y KCG +E+A KI F
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 358 ESSAVD-----------------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSF 400
+ + V V+ S+I+ Y E+A L+ M + I PD F
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 401 VCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI 460
+++L+ CANL++ GKQ+H +IK SD + ++LV+MY+KCG + D+ F +
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664
Query: 461 PDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
R V+W+AMI G A HG+G+EA+Q+F +M+ + + PNH+T +S+L AC H GL+ +
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724
Query: 521 HHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARI 580
+F M++ +G+ P HY+ M+DILG++GK + A+EL+ MPF+A+ +W LLG I
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 784
Query: 581 YK-NVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGM 639
++ NVEV + A L ++P+ SS + LLSN+YA AGMW+ V+ +RR M+ KLKKEPG
Sbjct: 785 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 844
Query: 640 SWIEVKDKVYTFTVGDRSHARSKEIYAKL 668
SW+E+KD+++ F VGD++H R +EIY +L
Sbjct: 845 SWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 314/628 (50%), Gaps = 58/628 (9%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V K C + L LG Q H ++ +GF FV N L+ +Y +F+ + +FD +P R
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEM----------VLSGIRPNEFSLSSM-------- 102
VVSWN + + Y + + +A FF M +LSG N SL S+
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 103 -------------INACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
+ C+ D+ LG +IHG +++G D+D+ +A+AL+DMYAK +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
++ VF+ I + VSW+A+IAGCV + ALK F++M+ + Y S L++CA
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 210 MELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
+ LG QLH +K + +D IV +DMYAKC +M +A+++F N ++N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 270 ISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF 329
I+G+ Q +A LF + G+GFD+ +LS V ++ A + + Q++ L++K++
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
D + N+ ID YGKC + +A ++F E D V+ ++I A+ Q G G E L L++
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
M I PD F S+L AC + G ++H I+K G S++ G SL++MY+KCG
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 450 IDDADRAFSEIPDRG--------------------IVSWSAMIGGLAQHGRGKEALQMFG 489
I++A++ S R VSW+++I G + ++A +F
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 490 QMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC--MIDILG 547
+M+E G+ P+ T +VL C + K + KK + + Y C ++D+
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYS 649
Query: 548 RAGKFQEAMELVDTMPFQANASVWGALL 575
+ G ++ L+ + + W A++
Sbjct: 650 KCGDLHDS-RLMFEKSLRRDFVTWNAMI 676
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/546 (27%), Positives = 254/546 (46%), Gaps = 42/546 (7%)
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDSLLGR 116
RSVVS+N + + + + +F + + ++ + FS + CA G LG+
Sbjct: 12 RSVVSFNRCLTEKISYRRVP-SFSYFTDFLNQVNSVSTTNFSF--VFKECAKQGALELGK 68
Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
+ H + I G+ F N L+ +Y + A VF + D+VSWN +I G +
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING--YSK 126
Query: 177 HND------------------W---------------ALKLFQQMKSSEINPNMFTYTSA 203
ND W ++++F M I + T+
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
LK C+ +E LG Q+H ++++ +D + L+DMYAK E+ +F +PEKN
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
++W+ +I+G +QN A F M + G Q+ ++VL+S A+ + + Q+HA
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
++K+ F +D + + +D Y KC +++DA +F S ++ + +MIT Y+Q G +A
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366
Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNM 443
L L+ + + D S + ACA + +G Q++ IK D N+ ++M
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDM 426
Query: 444 YAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITL 503
Y KC ++ +A R F E+ R VSW+A+I Q+G+G E L +F ML + P+ T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 504 VSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMP 563
S+L AC L + H S K G+ +ID+ + G +EA ++
Sbjct: 487 GSILKACTGGSLGYGMEIH--SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 564 FQANAS 569
+AN S
Sbjct: 545 QRANVS 550
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 195/415 (46%), Gaps = 43/415 (10%)
Query: 199 TYTSALKACAGMELKELGRQLHCSLI--------------------------------KM 226
++ K CA ELG+Q H +I KM
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 227 EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLF 286
++ D + +++ Y+K M +A F++MP +++++WN ++SG+LQNG +++ +F
Sbjct: 110 PLR-DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 287 PWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
M REG+ FD T + +LK + + + Q+H + V+ ++D ++L+D Y K
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
+++++F+ + V+ +++I Q L ALK + EMQ + +S+L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 407 NACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIV 466
+CA LS G Q+H H +K F +D + ++MYAKC ++ DA F +
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 467 SWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESM 526
S++AMI G +Q G +AL +F +++ G+ + I+L V AC ++E +
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY--- 405
Query: 527 EKKFGIQPMQEHYACM----IDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
I+ C+ ID+ G+ EA + D M + +A W A++ A
Sbjct: 406 --GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 137/353 (38%), Gaps = 60/353 (16%)
Query: 403 SSLLNACANLSAYEQGKQVHVHIIKFGFMSDTF--------------------------- 435
S + CA A E GKQ H H+I GF TF
Sbjct: 52 SFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPL 111
Query: 436 ----AGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM 491
+ N ++N Y+K + A+ F+ +P R +VSW++M+ G Q+G +++++F M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 492 LEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGK 551
+G+ + T +L C+ + + + G + ++D+ + +
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGM-QIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 552 FQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNI 611
F E++ + +P + N+ W A++ V+ + + F E +K + V S I
Sbjct: 231 FVESLRVFQGIP-EKNSVSWSAIIAGC-----VQNNLLSLALKFFKEMQKVNAGVSQS-I 283
Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEV 671
YAS + + A + +L S V T T+ ++YAK D +
Sbjct: 284 YAS--VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL---------DMYAKCDNM 332
Query: 672 SDL---------LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIA 715
D LN+ Y M+ T E K LL+H + F I+
Sbjct: 333 QDAQILFDNSENLNRQSYNAMI-TGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/675 (37%), Positives = 384/675 (56%), Gaps = 36/675 (5%)
Query: 133 SANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSE 192
SA+ ++ +Y + L +A+ +FK ++ P +++W +VI AL F +M++S
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 193 INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM---- 248
P+ + S LK+C M G +H ++++ + D G L++MYAK M
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 249 --------------------------------DEARMIFHLMPEKNLIAWNIVISGHLQN 276
D R +F +MP K+++++N +I+G+ Q+
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
G +A + M + D TLS+VL + + + K++H ++ +SD YI
Sbjct: 221 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 280
Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
+SL+D Y K +ED+ ++F D ++ S++ Y Q G EAL+L+ +M ++
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
P + SS++ ACA+L+ GKQ+H ++++ GF S+ F ++LV+MY+KCG+I A +
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
F + VSW+A+I G A HG G EA+ +F +M GV PN + V+VL AC+H GLV
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
EA +F SM K +G+ EHYA + D+LGRAGK +EA + M + SVW LL
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Query: 577 AARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKE 636
+ ++KN+E+ + AE +F ++ E +VL+ N+YAS G W +AK+R M+ L+K+
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Query: 637 PGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
P SWIE+K+K + F GDRSH +I L V + + K GYV LHDV+E K
Sbjct: 581 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 640
Query: 697 EQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNR 756
+LL+ HSE+LAVAFG+I T PG TIRV KN+RIC DCH + +FISKI REIIVRD +R
Sbjct: 641 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 700
Query: 757 FHHFRNGSCSCGGYW 771
FHHF G+CSCG YW
Sbjct: 701 FHHFNRGNCSCGDYW 715
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 237/485 (48%), Gaps = 72/485 (14%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAK---------CGNFIDS-- 49
VLK+CT DL G VHG +V G D D + N+L+ MYAK GN D
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP 170
Query: 50 -------------------------RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFF 84
RR+F+ +P + VVS+N++ + Y E+A+
Sbjct: 171 QRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMV 230
Query: 85 KEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKV 144
+EM + ++P+ F+LSS++ + D + G++IHGY I+ G DSD++ ++LVDMYAK
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS 290
Query: 145 GNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSAL 204
+ED+ VF + D +SWN+++AG V + + AL+LF+QM ++++ P ++S +
Sbjct: 291 ARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 205 KACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLI 264
ACA + LG+QLH +++ S+ + LVDMY+KCG++ AR IF M + +
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Query: 265 AWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
+W +I GH +G EA SLF M R+GV +Q VL + C V +
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA---------CSHVGLVD 461
Query: 325 VKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEAL 384
E+ Y NS+ YG +E ++ DL+ + G EEA
Sbjct: 462 -----EAWGYF-NSMTKVYGLNQELEHY------AAVADLL---------GRAGKLEEAY 500
Query: 385 KLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV-NM 443
+M + P V S+LL++C+ E ++V I F S+ L+ NM
Sbjct: 501 NFISKMC---VEPTGSVWSTLLSSCSVHKNLELAEKVAEKI--FTVDSENMGAYVLMCNM 555
Query: 444 YAKCG 448
YA G
Sbjct: 556 YASNG 560
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 233/465 (50%), Gaps = 40/465 (8%)
Query: 53 FDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDS 112
F + V++W S+ C+ +A+ F EM SG P+ S++ +C D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 113 LLGRKIHGYSIKLGYDSDMFSANALVDMYAK---------VGNLEDAVA----------- 152
G +HG+ ++LG D D+++ NAL++MYAK VGN+ D +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 153 ----------------VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
VF+ + D+VS+N +IAG + AL++ ++M ++++ P+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
FT +S L + G+++H +I+ I SD +G LVDMYAK ++++ +F
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
+ ++ I+WN +++G++QNG EA LF M V S+V+ + A + +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
KQ+H ++ F S+ +I ++L+D Y KCG+++ A KIF + +D V+ T++I +A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTF 435
G G EA+ L+ EM+ + + P+ ++L AC+++ ++ + K +G +
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 436 AGNSLVNMYAKCGSIDDADRAFSE--IPDRGIVSWSAMIGGLAQH 478
++ ++ + G +++A S+ + G V WS ++ + H
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVH 525
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 41/409 (10%)
Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
+K ++ K +QLH I+ + S + ++ +Y + EA ++F + +
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPV 70
Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
+AW VI +A + F M G D +VLKS + + VH
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 324 SVKTAFESDDYIVNSLIDAYGK---------CGHVEDAV--------------------- 353
V+ + D Y N+L++ Y K G+V D +
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 354 ------KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
++F+ D+V+ ++I YAQ G+ E+AL++ EM ++ PDSF SS+L
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 408 ACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS 467
+ +GK++H ++I+ G SD + G+SLV+MYAK I+D++R FS + R +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 468 WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKH-HFESM 526
W++++ G Q+GR EAL++F QM+ V P + SV+ AC H + K H +
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 527 EKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
FG + ++D+ + G + A ++ D M S W A++
Sbjct: 371 RGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAII 416
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL-IDAYGKCGHVEDAVKIF 356
+ + T++K+ ++ KQ+HA ++T +S + S+ I Y + +A+ +F
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLF 62
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
K + ++A S+I + L +AL ++EM+ PD V S+L +C +
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC---GS------------------------ 449
G+ VH I++ G D + GN+L+NMYAK GS
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 450 ---------IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
ID R F +P + +VS++ +I G AQ G ++AL+M +M + P+
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 501 ITLVSVL 507
TL SVL
Sbjct: 243 FTLSSVL 249
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/624 (37%), Positives = 374/624 (59%), Gaps = 9/624 (1%)
Query: 157 IEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELG 216
++ D+ SWN+VIA + AL F M+ + P ++ A+KAC+ + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
+Q H +SD V L+ MY+ CG +++AR +F +P++N+++W +I G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 277 GGDMEAASLFPWMY------REGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
G ++A SLF + + + D L +V+ + + A G+ + +H+ +K F+
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 331 SDDYIVNSLIDAYGKCGH--VEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
+ N+L+DAY K G V A KIF + D V+ S+++ YAQ G+ EA +++
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 389 EM-QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKC 447
+ +++ + ++ S++L A ++ A GK +H +I+ G D G S+++MY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 448 GSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVL 507
G ++ A +AF + ++ + SW+AMI G HG +AL++F M++ GV PN+IT VSVL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 508 CACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQAN 567
AC+HAGL E F +M+ +FG++P EHY CM+D+LGRAG Q+A +L+ M + +
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 568 ASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRF 627
+ +W +LL A RI+KNVE+ + + LF ++ ++LLS+IYA AG W +V +VR
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 628 MKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
MK+ L K PG S +E+ +V+ F +GD H + ++IY L E++ L +AGYV +
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575
Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
HDV+E EKE L HSEKLA+AFG++ T PG+T+ V KNLR+C DCH + ISKIV R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635
Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
E +VRD RFHHF++G CSCG YW
Sbjct: 636 EFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 231/478 (48%), Gaps = 51/478 (10%)
Query: 2 LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
+KAC+S D+F G Q H G+ SD FV+++L+VMY+ CG D+R++FD IP+R++
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 62 VSWNSLFSCYVHCDFLEEAVCFFKEMVL------SGIRPNEFSLSSMINACAGSGDSLLG 115
VSW S+ Y +AV FK++++ + + L S+I+AC+ L
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA--VFKDIEHPDIVSWNAVIAGCV 173
IH + IK G+D + N L+D YAK G AVA +F I D VS+N++++
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 174 LHEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP 232
++ A ++F+++ K+ + N T ++ L A + +G+ +H +I+M ++ D
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 233 IVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYRE 292
IVG ++DMY KCG ++ AR F M KN+ +W +I+G+ +G +A LFP M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 293 GVGFDQTTLSTVLK--SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE 350
GV + T +VL S A G + +A+ + E ++D G+ G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEG-WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 351 DAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA 410
A Y +Q ++ PDS + SSLL AC
Sbjct: 442 KA----------------------------------YDLIQRMKMKPDSIIWSSLLAAC- 466
Query: 411 NLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDADRAFSEIPDRGIV 466
++ + + + + + + G ++ ++YA G D +R + +RG+V
Sbjct: 467 --RIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 210/436 (48%), Gaps = 15/436 (3%)
Query: 56 IPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLG 115
+ + V SWNS+ + EA+ F M + P S I AC+ D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
++ H + GY SD+F ++AL+ MY+ G LEDA VF +I +IVSW ++I G L+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 176 EHNDWALKLFQQMKSSEINPN--MFT----YTSALKACAGMELKELGRQLHCSLIKMEIK 229
+ A+ LF+ + E + + MF S + AC+ + K L +H +IK
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 230 SDPIVGVGLVDMYAKC--GSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
VG L+D YAK G + AR IF + +K+ +++N ++S + Q+G EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 288 WMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKC 346
+ + V F+ TLSTVL +V+ A+ + K +H ++ E D + S+ID Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 347 GHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLL 406
G VE A K F ++ + T+MI Y G +AL+L+ M D + P+ S+L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 407 NACANLSAYEQG-KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PD 462
AC++ + +G + + +FG +V++ + G + A + PD
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 463 RGIVSWSAMIGGLAQH 478
I WS+++ H
Sbjct: 456 SII--WSSLLAACRIH 469
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 3/211 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGN--FIDSRRLFDAIPE 58
V+ AC+ L +H V+ GFD V N+L+ YAK G +R++FD I +
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248
Query: 59 RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP-NEFSLSSMINACAGSGDSLLGRK 117
+ VS+NS+ S Y EA F+ +V + + N +LS+++ A + SG +G+
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 118 IHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEH 177
IH I++G + D+ +++DMY K G +E A F +++ ++ SW A+IAG +H H
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACA 208
AL+LF M S + PN T+ S L AC+
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACS 399
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/687 (36%), Positives = 401/687 (58%), Gaps = 9/687 (1%)
Query: 94 PNEF-SLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVA 152
PN+ +L S++ C G S G ++H Y +K G ++ ++N L+DMY K A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 153 VFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMEL 212
VF + ++VSW+A+++G VL+ +L LF +M I PN FT+++ LKAC +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 213 KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISG 272
E G Q+H +K+ + VG LVDMY+KCG ++EA +F + +++LI+WN +I+G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 273 HLQNGGDMEAASLFPWMYREGVG--FDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
+ G +A F M + D+ TL+++LK+ +S I KQ+H V++ F
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 331 --SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYL 388
S I SL+D Y KCG++ A K F + +++ +S+I YAQ G EA+ L+
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 389 EMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCG 448
+Q+ DSF SS++ A+ + QGKQ+ +K +T NS+V+MY KCG
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 449 SIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLC 508
+D+A++ F+E+ + ++SW+ +I G +HG GK+++++F +ML + P+ + ++VL
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
AC+H+G++ E + F + + GI+P EHYAC++D+LGRAG+ +EA L+DTMP + N
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
+W LL R++ ++E+G+ ++L I+ + + +V++SN+Y AG W+ R
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKA-GYVPMVETD 687
LKKE GMSW+E++ +V+ F G+ SH + I L E L + GYV ++ +
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHE 602
Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIA---TPPGATIRVKKNLRICVDCHTSFEFISKI 744
LHD+++ KE+ L HSEKLA+ L G TIRV KNLR+CVDCH + +SKI
Sbjct: 603 LHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKI 662
Query: 745 VSREIIVRDVNRFHHFRNGSCSCGGYW 771
+VRD RFH F +G CSCG YW
Sbjct: 663 TKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 263 bits (671), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 264/485 (54%), Gaps = 6/485 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L+ CT K G QVH ++ +G + +N L+ MY KC + + ++FD++PER+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VVSW++L S +V L+ ++ F EM GI PNEF+ S+ + AC G +IHG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ +K+G++ + N+LVDMY+K G + +A VF+ I ++SWNA+IAG V +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 181 ALKLFQQMKSSEI--NPNMFTYTSALKACAGMELKELGRQLHCSLIK--MEIKSDPIVGV 236
AL F M+ + I P+ FT TS LKAC+ + G+Q+H L++ S +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
LVD+Y KCG + AR F + EK +I+W+ +I G+ Q G +EA LF +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
D LS+++ A F + KQ+ AL+VK + ++NS++D Y KCG V++A K F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
E D+++ T +IT Y + GLG+++++++ EM I PD ++L+AC++ +
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 417 QGKQVHVHIIK-FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGG 474
+G+++ +++ G +V++ + G + +A +P + V W ++
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Query: 475 LAQHG 479
HG
Sbjct: 492 CRVHG 496
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/766 (35%), Positives = 407/766 (53%), Gaps = 115/766 (15%)
Query: 114 LGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPD------------ 161
L R +HG I G+ N L+D+Y K L A +F +I PD
Sbjct: 32 LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91
Query: 162 ---------------------IVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTY 200
V +NA+I G + A+ LF +MK P+ FT+
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 201 TSALKACAGMEL----KELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS----MDEAR 252
S L AG+ L ++ Q H + +K V LV +Y+KC S + AR
Sbjct: 152 ASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 253 MIFHLMPEKN--------------------------------LIAWNIVISGHLQNGGDM 280
+F + EK+ L+A+N +ISG++ G
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 281 EAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT---AFESDDYIVN 337
EA + M G+ D+ T +V+++ A+ + + KQVHA ++ +F D N
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----N 324
Query: 338 SLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAY----------------------- 374
SL+ Y KCG ++A IF++ A DLV+ ++++ Y
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 375 --------AQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
A+ G GEE LKL+ M+ P + S + +CA L AY G+Q H ++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
K GF S AGN+L+ MYAKCG +++A + F +P VSW+A+I L QHG G EA+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 487 MFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDIL 546
++ +ML+ G+ P+ ITL++VL AC+HAGLV + + +F+SME + I P +HYA +ID+L
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564
Query: 547 GRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHV 606
R+GKF +A +++++PF+ A +W ALL R++ N+E+G AA+ LF + PE T++
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 607 LLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYA 666
LLSN++A+ G W+ VA+VR+ M+D +KKE SWIE++ +V+TF V D SH ++ +Y
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Query: 667 KLDEVSDLLNKAGYVPMVETDLHDVE-ESEKEQLLYHHSEKLAVAFGLIATPPGATIRVK 725
L ++ + + GYVP LHDVE + KE +L HSEK+AVAFGL+ PPG TIR+
Sbjct: 685 YLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIF 744
Query: 726 KNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
KNLR C DCH F F+S +V R+II+RD RFHHFRNG CSCG +W
Sbjct: 745 KNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 163/600 (27%), Positives = 256/600 (42%), Gaps = 114/600 (19%)
Query: 8 KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE--------- 58
+ L L VHG ++ GF + N L+ +Y K +R+LFD I E
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 59 ------------------------RSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRP 94
R V +N++ + + H + A+ F +M G +P
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 95 NEFSLSSMINACA-GSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN----LED 149
+ F+ +S++ A + D + H ++K G +NALV +Y+K + L
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 150 AVAVFKDIEHPDIVSW--------------------------------NAVIAGCVLHEH 177
A VF +I D SW NA+I+G V
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 178 NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVG 237
AL++ ++M SS I + FTY S ++ACA L +LG+Q+H +++ E S
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN-S 325
Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWN------------------------------ 267
LV +Y KCG DEAR IF MP K+L++WN
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 268 -IVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVK 326
I+ISG +NG E LF M REG S +KS A A +Q HA +K
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 327 TAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKL 386
F+S N+LI Y KCG VE+A ++F+ +D V+ ++I A Q G G EA+ +
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 387 YLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVH-----VHIIKFGFMSDTFAGNSLV 441
Y EM + I PD ++L AC++ +QG++ V+ I G +D +A L+
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG--ADHYA--RLI 561
Query: 442 NMYAKCGSIDDADRAFSEIPDRGIVS-WSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
++ + G DA+ +P + W A++ G HG + + ++ G++P H
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEH 619
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 154/314 (49%), Gaps = 35/314 (11%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V++AC + L LG QVH V+ S F NSLV +Y KCG F ++R +F+ +P +
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEM----VLS-------------------------- 90
+VSWN+L S YV + EA FKEM +LS
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 91 -GIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
G P +++ S I +CA G G++ H +K+G+DS + + NAL+ MYAK G +E+
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 150 AVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAG 209
A VF+ + D VSWNA+IA H H A+ ++++M I P+ T + L AC+
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530
Query: 210 MELKELGRQLHCSLIKM-EIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIA-WN 267
L + GR+ S+ + I L+D+ + G +A + +P K W
Sbjct: 531 AGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590
Query: 268 IVISGHLQNGGDME 281
++SG + G+ME
Sbjct: 591 ALLSG-CRVHGNME 603
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 140/601 (23%), Positives = 228/601 (37%), Gaps = 153/601 (25%)
Query: 194 NPNMFT-----YTSALKACAGMELK--ELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCG 246
NP++ Y + L+ C + +L R +H ++I + + L+D+Y K
Sbjct: 4 NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS 63
Query: 247 SMDEARMIFHLMPEKNLIA---------------------------------WNIVISGH 273
++ AR +F + E + IA +N +I+G
Sbjct: 64 ELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGF 123
Query: 274 LQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASF-QAIGVCKQVHALSVKTAFESD 332
N A +LF M EG D T ++VL +A C Q HA ++K+
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI 183
Query: 333 DYIVNSLIDAYGKCGH----VEDAVKIFKESSAVD------------------------- 363
+ N+L+ Y KC + A K+F E D
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 364 -------LVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
LVA +MI+ Y G +EAL++ M I D F S++ ACA +
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 417 QGKQVHVHIIK---FGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSA--- 470
GKQVH ++++ F F D NSLV++Y KCG D+A F ++P + +VSW+A
Sbjct: 304 LGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 471 ----------------------------MIGGLAQHGRGKEALQMFGQMLEDGVLPNHIT 502
MI GLA++G G+E L++F M +G P
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 503 LVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTM 562
+ +C G + + + K G +I + + G +EA ++ TM
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQL-LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 563 PFQANASVWGALLGAARIYKNVEVGQHA---------AEML-FAIEPEKSSTHVLLSNIY 612
P + S W AL+ A +GQH EML I P++ + +L+
Sbjct: 479 PCLDSVS-WNALIAA--------LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC- 528
Query: 613 ASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVS 672
+ AG+ D G + + + VY G +AR ++ + + S
Sbjct: 529 SHAGLVDQ-----------------GRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 673 D 673
D
Sbjct: 572 D 572
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 22/246 (8%)
Query: 2 LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
+K+C G Q H ++ GFDS N+L+ MYAKCG ++R++F +P
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 62 VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG- 120
VSWN+L + EAV ++EM+ GIRP+ +L +++ AC+ +G GRK
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 121 ----YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLH 175
Y I G D L+D+ + G DA +V + + P W A+++GC +H
Sbjct: 544 METVYRIPPGAD----HYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 176 EHNDWAL----KLFQQMKSSE----INPNMFTYTSALKACAG----MELKELGRQLHCSL 223
+ + + KLF + + + NM T + A M + + +++ CS
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 224 IKMEIK 229
I+ME +
Sbjct: 660 IEMETQ 665
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/677 (37%), Positives = 383/677 (56%), Gaps = 4/677 (0%)
Query: 99 LSSMINACAGSGDSLLGRKIHGYSIKLGYDS---DMFSANALVDMYAKVGNLEDAVAVFK 155
L+ ++ CA S +G IH + I S D + N+L+++Y K A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKE 214
+ ++VSW A++ G + LKLF+ M S E PN F T K+C+ E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 215 LGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHL 274
G+Q H +K + S V LV MY+ C EA + +P +L ++ +SG+L
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 275 QNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDY 334
+ G E + E ++ T + L+ ++ + + + QVH+ V+ F ++
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
+LI+ YGKCG V A ++F ++ A ++ T+++ AY Q EEAL L+ +M +E
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
+ P+ + + LLN+ A LS +QG +H ++K G+ + GN+LVNMYAK GSI+DA
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
+AFS + R IV+W+ MI G + HG G+EAL+ F +M+ G +PN IT + VL AC+H G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 515 LVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGAL 574
V + H+F + KKF +QP +HY C++ +L +AG F++A + + T P + + W L
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 575 LGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLK 634
L A + +N +G+ AE P S +VLLSNI+A + W+ VAKVR M + +K
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573
Query: 635 KEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEES 694
KEPG+SWI ++++ + F D H IYAK+ EV + GY P V HDV+E
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEE 633
Query: 695 EKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDV 754
++E L +HSEKLAVA+GLI TP + + V KN+RIC DCH++ + ISKI R I++RD
Sbjct: 634 QREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDS 693
Query: 755 NRFHHFRNGSCSCGGYW 771
NRFHHF +G CSC YW
Sbjct: 694 NRFHHFLDGQCSCCDYW 710
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 234/480 (48%), Gaps = 6/480 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDS---DEFVANSLVVMYAKCGNFIDSRRLFDAIP 57
+LK C + L +G +H ++ T S D + NSL+ +Y KC + +R+LFD +P
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 58 ERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGR 116
ER+VVSW ++ Y + F E + FK M SG RPNEF + + +C+ SG G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 117 KIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
+ HG +K G S F N LV MY+ +A+ V D+ + D+ +++ ++G +
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 177 HNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGV 236
L + ++ + + N TY S+L+ + + L Q+H +++ ++
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 237 GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGF 296
L++MY KCG + A+ +F +N+ ++ + Q+ EA +LF M + V
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
++ T + +L S+A + +H L +K+ + + + N+L++ Y K G +EDA K F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
+ D+V +MI+ + GLG EAL+ + M P+ +L AC+++ E
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 417 QGKQVHVHII-KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGG 474
QG ++ KF D +V + +K G DA+ P + +V+W ++
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/659 (37%), Positives = 397/659 (60%), Gaps = 8/659 (1%)
Query: 116 RKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLH 175
+ I + +K G+ +++ S + LVD K G+++ A VF + IV+WN++IA + H
Sbjct: 85 KTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 176 EHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH--CSLIKMEIKSDPI 233
+ A+++++ M ++ + P+ +T +S KA + + L++ ++ H ++ +E+ S+
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV-SNVF 202
Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
VG LVDMY K G EA+++ + EK+++ +I G+ Q G D EA F M E
Sbjct: 203 VGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK 262
Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
V ++ T ++VL S + + IG K +H L VK+ FES SL+ Y +C V+D++
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
++FK + V+ TS+I+ Q G E AL + +M I P+SF SS L C+NL+
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLA 382
Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
+E+G+Q+H + K+GF D +AG+ L+++Y KCG D A F + + ++S + MI
Sbjct: 383 MFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 474 GLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQ 533
AQ+G G+EAL +F +M+ G+ PN +T++SVL ACN++ LV E F+S +K I
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF-RKDKIM 501
Query: 534 PMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEM 593
+HYACM+D+LGRAG+ +EA E++ T + +W LL A ++++ VE+ +
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRK 560
Query: 594 LFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTV 653
+ IEP T +L+SN+YAS G W+ V +++ MKD KLKK P MSW+E+ + +TF
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMA 620
Query: 654 GDR-SHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFG 712
GD SH S++I L+E+ GYV D+EE+ KE+ L+ HSEKLA+AF
Sbjct: 621 GDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA 680
Query: 713 LIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
+ G +IR+ KNLR+CVDCH+ + +S+++ REII RD RFHHFR+GSCSCG YW
Sbjct: 681 -VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 260/496 (52%), Gaps = 6/496 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L+ C ++ + + ++ +GF + E + LV KCG+ +R++FD + ER
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+V+WNSL + + +EAV ++ M+ + + P+E++LSS+ A + ++ HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 121 YSIKLGYD-SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
++ LG + S++F +ALVDMY K G +A V +E D+V A+I G +
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
A+K FQ M ++ PN +TY S L +C ++ G+ +H ++K +S L+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
MY +C +D++ +F + N ++W +ISG +QNG + A F M R+ + +
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSF 369
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
TLS+ L+ ++ +Q+H + K F+ D Y + LID YGKCG + A +F
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
S VD+++ +MI +YAQ G G EAL L+ M + + P+ S+L AC N E+G
Sbjct: 430 SEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGC 489
Query: 420 QVHVHIIKFGFM--SDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
++ K M +D +A +V++ + G +++A+ +E+ + +V W ++
Sbjct: 490 ELFDSFRKDKIMLTNDHYA--CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKV 547
Query: 478 HGRGKEALQMFGQMLE 493
H + + A ++ ++LE
Sbjct: 548 HRKVEMAERITRKILE 563
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 204/379 (53%), Gaps = 6/379 (1%)
Query: 18 HGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
HG+ V G + S+ FV ++LV MY K G +++ + D + E+ VV +L Y
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 77 LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
EAV F+ M++ ++PNE++ +S++ +C D G+ IHG +K G++S + S +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
L+ MY + ++D++ VFK IE+P+ VSW ++I+G V + + AL F++M I PN
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
FT +SAL+ C+ + + E GRQ+H + K D G GL+D+Y KCG D AR++F
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG-FDQTTLSTVLKSVASFQAIG 315
+ E ++I+ N +I + QNG EA LF M G+ D T LS +L S
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEE 487
Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA-- 373
C+ + ++D+ ++D G+ G +E+A + E DLV ++++A
Sbjct: 488 GCELFDSFRKDKIMLTNDHYA-CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACK 546
Query: 374 -YAQFGLGEEALKLYLEMQ 391
+ + + E + LE++
Sbjct: 547 VHRKVEMAERITRKILEIE 565
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/574 (40%), Positives = 351/574 (61%), Gaps = 2/574 (0%)
Query: 200 YTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMP 259
Y + L AC G+++H +IK + L+ Y KC +++AR + MP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 260 EKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQ 319
EKN+++W +IS + Q G EA ++F M R ++ T +TVL S +G+ KQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 320 VHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGL 379
+H L VK ++S ++ +SL+D Y K G +++A +IF+ D+V+CT++I YAQ GL
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 380 GEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNS 439
EEAL+++ + ++P+ +SLL A + L+ + GKQ H H+++ NS
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 440 LVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQML-EDGVLP 498
L++MY+KCG++ A R F +P+R +SW+AM+ G ++HG G+E L++F M E V P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 499 NHITLVSVLCACNHAGLVAEAKHHFESM-EKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
+ +TL++VL C+H + + F+ M ++G +P EHY C++D+LGRAG+ EA E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 558 LVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGM 617
+ MP + A V G+LLGA R++ +V++G+ L IEPE + +V+LSN+YASAG
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 618 WDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNK 677
W +V VR M + KEPG SWI+ + ++ F DR+H R +E+ AK+ E+S + +
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 678 AGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTS 737
AGYVP + L+DV+E +KE++L HSEKLA+ FGLIAT G IRV KNLRICVDCH
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 738 FEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
+ SK+ RE+ +RD NRFH +G CSCG YW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 241/483 (49%), Gaps = 57/483 (11%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L AC K+ L G +VH ++ T + ++ L++ Y KC D+R++ D +PE++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VVSW ++ S Y EA+ F EM+ S +PNEF+ ++++ +C + LG++IHG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+K YDS +F ++L+DMYAK G +++A +F+ + D+VS A+IAG ++
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL++F ++ S ++PN TY S L A +G+ L + G+Q HC +++ E+ ++ L+D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG-VGFDQT 299
MY+KCG++ AR +F MPE+ I+WN ++ G+ ++G E LF M E V D
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 300 TLSTVLKSVASFQ----AIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKI 355
TL VL + + + + + A T ++ Y ++D G+ G +++A +
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY--GCIVDMLGRAGRIDEAFEF 415
Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
K + P + V SLL AC +
Sbjct: 416 IKRMPS----------------------------------KPTAGVLGSLLGACRVHLSV 441
Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLV--NMYAKCGSIDDAD--------RAFSEIPDRGI 465
+ G+ V +I+ + AGN ++ N+YA G D + +A ++ P R
Sbjct: 442 DIGESVGRRLIE---IEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR-- 496
Query: 466 VSW 468
SW
Sbjct: 497 -SW 498
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 199/390 (51%), Gaps = 6/390 (1%)
Query: 77 LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
L+EA+ EM + G +++NAC G+++H + IK Y +
Sbjct: 36 LQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTR 92
Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
L+ Y K LEDA V ++ ++VSW A+I+ H+ AL +F +M S+ PN
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
FT+ + L +C LG+Q+H ++K S VG L+DMYAK G + EAR IF
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE 212
Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
+PE+++++ +I+G+ Q G D EA +F ++ EG+ + T +++L +++ +
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
KQ H ++ + NSLID Y KCG++ A ++F ++ +M+ Y++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 377 FGLGEEALKLYLEMQD-REINPDSFVCSSLLNACANLSAYEQGKQVHVHII--KFGFMSD 433
GLG E L+L+ M+D + + PD+ ++L+ C++ + G + ++ ++G
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392
Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
T +V+M + G ID+A +P +
Sbjct: 393 TEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/744 (35%), Positives = 402/744 (54%), Gaps = 61/744 (8%)
Query: 32 VANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG 91
AN + ++ G ++R+LFD+ +S+ SWNS+ + Y +A F EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP--- 75
Query: 92 IRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAV 151
D ++ S N LV Y K G +++A
Sbjct: 76 ------------------------------------DRNIISWNGLVSGYMKNGEIDEAR 99
Query: 152 AVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME 211
VF + ++VSW A++ G V + D A LF +M N ++T L +
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVML-----IG 150
Query: 212 LKELGR-QLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVI 270
+ GR C L +M D I ++ K G +DEAR IF M E+++I W ++
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 271 SGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQV-HALSVKTAF 329
+G+ QN +A +F M + + + +++L I +++ + VK
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI 266
Query: 330 ESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLE 389
N++I G+ G + A ++F + + ++I + + G EAL L++
Sbjct: 267 A-----CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 390 MQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGS 449
MQ + + P S+L+ CA+L++ GKQVH +++ F D + + L+ MY KCG
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQM-LEDGVLPNHITLVSVLC 508
+ + F P + I+ W+++I G A HG G+EAL++F +M L PN +T V+ L
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Query: 509 ACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANA 568
AC++AG+V E +ESME FG++P+ HYACM+D+LGRAG+F EAME++D+M + +A
Sbjct: 442 ACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDA 501
Query: 569 SVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFM 628
+VWG+LLGA R + ++V + A+ L IEPE S T++LLSN+YAS G W +VA++R+ M
Sbjct: 502 AVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLM 561
Query: 629 KDNKLKKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETD 687
K ++K PG SW EV++KV+ FT G SH + I LDE+ LL +AGY P
Sbjct: 562 KTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYA 621
Query: 688 LHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSR 747
LHDV+E EK L +HSE+LAVA+ L+ G IRV KNLR+C DCHT+ + ISK+ R
Sbjct: 622 LHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKER 681
Query: 748 EIIVRDVNRFHHFRNGSCSCGGYW 771
EII+RD NRFHHFRNG CSC YW
Sbjct: 682 EIILRDANRFHHFRNGECSCKDYW 705
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 204/493 (41%), Gaps = 74/493 (15%)
Query: 27 DSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKE 86
D D S++ K G ++R +FD + ERSV++W ++ + Y + +++A F
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 87 MVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGN 146
M E S +SM+ +G ++ ++ + + NA++ + G
Sbjct: 229 MP----EKTEVSWTSMLMGYVQNGRIEDAEEL----FEVMPVKPVIACNAMISGLGQKGE 280
Query: 147 LEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW---ALKLFQQMKSSEINPNMFTYTSA 203
+ A VF ++ + SW VI +HE N + AL LF M+ + P T S
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIK---IHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 204 LKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNL 263
L CA + G+Q+H L++ + D V L+ MY KCG + ++++IF P K++
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 264 IAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHAL 323
I WN +ISG+ +G EA +F M G ST V + C
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSG--------STKPNEVTFVATLSAC------ 443
Query: 324 SVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS-----MITAYAQFG 378
+Y G VE+ +KI++ +V V + M+ + G
Sbjct: 444 ------------------SYA--GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKF-GFMSDTFAG 437
EA+++ M + PD+ V SLL AC S + + +I+ S T+
Sbjct: 484 RFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI- 539
Query: 438 NSLVNMYAKCGSIDDADRAFSEIPDRGI-----VSWSAM--------IGGLAQHGRGKEA 484
L NMYA G D + R + SW+ + GG+ H +
Sbjct: 540 -LLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESI 598
Query: 485 LQMFGQMLEDGVL 497
L++ ++ DG+L
Sbjct: 599 LKILDEL--DGLL 609
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 12/234 (5%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L C S L G QVH +V FD D +VA+ L+ MY KCG + S+ +FD P +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKIH 119
++ WNS+ S Y EEA+ F EM LSG +PNE + + ++AC+ +G G KI+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 120 GYSIKLGYDSDMFSAN--ALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHE 176
S++ + +A+ +VDM + G +A+ + + PD W +++ C H
Sbjct: 457 E-SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515
Query: 177 HNDWALKLFQQMKSSEINP-NMFTYT--SALKACAGM--ELKELGRQLHCSLIK 225
D A F K EI P N TY S + A G ++ EL + + L++
Sbjct: 516 QLDVA--EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/636 (38%), Positives = 372/636 (58%), Gaps = 11/636 (1%)
Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
++ Y + L DA+ +F ++ D+VSWN++I+GCV + A+KLF +M +
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
++T+ + C + +L +M +K D +V Y + G +D+A +F
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERL---FYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFK 183
Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
MP KN+I+W +I G QN EA LF M R + + V+ + A+ A +
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHM 243
Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
QVH L +K F ++Y+ SLI Y C + D+ K+F E + T++++ Y+
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
E+AL ++ M I P+ +S LN+C+ L + GK++H +K G +D F
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
GNSLV MY+ G+++DA F +I + IVSW+++I G AQHGRGK A +FGQM+
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423
Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFG-IQPMQEHYACMIDILGRAGKFQEA 555
P+ IT +L AC+H G + + + F M I +HY CM+DILGR GK +EA
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEA 483
Query: 556 MELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASA 615
EL++ M + N VW ALL A R++ +V+ G+ AA +F ++ + S+ +VLLSNIYASA
Sbjct: 484 EELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASA 543
Query: 616 GMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLL 675
G W NV+K+R MK N + K+PG SW+ ++ K + F GD+ H IY KL+ + + L
Sbjct: 544 GRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC--SRIYEKLEFLREKL 601
Query: 676 NKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCH 735
+ GY P + LHDVE+ +KE++L++HSE+LA+AFGLI T G+ + V KNLR+C DCH
Sbjct: 602 KELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCH 661
Query: 736 TSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
T + IS +V REI++RD RFHHF+NG+CSCG YW
Sbjct: 662 TVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 231/475 (48%), Gaps = 40/475 (8%)
Query: 36 LVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPN 95
++ Y + +D+ LFD +P R VVSWNS+ S V C + AV F EM +
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 96 EFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFK 155
S ++M+N C SG ++ Y + + D + N++V Y + G ++DA+ +FK
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLF-YQMPV---KDTAAWNSMVHGYLQFGKVDDALKLFK 183
Query: 156 DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
+ +++SW +I G +E + AL LF+ M I +T + ACA +
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHM 243
Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
G Q+H +IK+ + V L+ YA C + ++R +F + + W ++SG+
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
N +A S+F M R + +Q+T ++ L S ++ + K++H ++VK E+D ++
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 336 VNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREI 395
NSL+ Y G+V DAV +F + +V+ S+I AQ G G+ A ++ +M
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423
Query: 396 NPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADR 455
PD + LL+AC++ E+G+++ F +MS S +N
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKL------FYYMS------SGINHI----------- 460
Query: 456 AFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCAC 510
DR I ++ M+ L + G+ KEA ++ +M+ V PN + +++L AC
Sbjct: 461 ------DRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSAC 506
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 157/293 (53%), Gaps = 7/293 (2%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
V+ AC + +G+QVHG+++ GF +E+V+ SL+ YA C DSR++FD
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
V W +L S Y E+A+ F M+ + I PN+ + +S +N+C+ G G+++HG
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
++KLG ++D F N+LV MY+ GN+ DAV+VF I IVSWN++I GC H W
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVG--VGL 238
A +F QM P+ T+T L AC+ E GR+L + D + +
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCM 470
Query: 239 VDMYAKCGSMDEA-RMIFHLMPEKNLIAWNIVISGHLQNG----GDMEAASLF 286
VD+ +CG + EA +I ++ + N + W ++S + G+ AA++F
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 212/457 (46%), Gaps = 52/457 (11%)
Query: 29 DEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV 88
D NS+V Y + G D+ +LF +P ++V+SW ++ + EA+ FK M+
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 89 LSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLE 148
I+ + +I ACA + +G ++HG IKLG+ + + + +L+ YA +
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 149 DAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
D+ VF + H + W A+++G L++ ++ AL +F M + I PN T+ S L +C+
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNI 268
+ + G+++H +K+ +++D VG LV MY+ G++++A +F + +K++++WN
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 269 VISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTA 328
+I G Q+G A +F M ++
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQM-----------------------------------IRLN 422
Query: 329 FESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSAVDLV-----ACTSMITAYAQFGLGEE 382
E D+ L+ A CG +E K+F SS ++ + T M+ + G +E
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 383 ALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLV- 441
A +L M + P+ V +LL+AC S ++G++ I F S + A L+
Sbjct: 483 AEELIERMV---VKPNEMVWLALLSACRMHSDVDRGEKAAAAI--FNLDSKSSAAYVLLS 537
Query: 442 NMYAKCGSIDDADRAFSEIPDRGIV-----SWSAMIG 473
N+YA G + + ++ GI+ SW + G
Sbjct: 538 NIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRG 574
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 25/297 (8%)
Query: 248 MDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFDQTT------ 300
+DEAR +F+ +P ++ + +I+G+ ++ ++A +LF M R+ V ++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 301 --LSTVLK--------SVASFQAI-------GVCKQVHALSVKTAFESDDYIVNSLIDAY 343
++T +K SV S+ A+ G Q L + + D NS++ Y
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHGY 169
Query: 344 GKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCS 403
+ G V+DA+K+FK+ ++++ T+MI Q EAL L+ M I S +
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 404 SLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR 463
++ ACAN A+ G QVH IIK GF+ + + SL+ YA C I D+ + F E
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 464 GIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAK 520
+ W+A++ G + + + ++AL +F ML + +LPN T S L +C+ G + K
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 16/254 (6%)
Query: 335 IVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE 394
+ +I Y + + DA+ +F E D+V+ SMI+ + G A+KL+ EM +R
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 395 INPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDAD 454
+ ++++N C +Q +++ + + DT A NS+V+ Y + G +DDA
Sbjct: 128 V----VSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDDAL 179
Query: 455 RAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAG 514
+ F ++P + ++SW+ MI GL Q+ R EAL +F ML + V+ AC +
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN-- 237
Query: 515 LVAEAKH---HFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
A A H + K G + A +I + ++ ++ D +VW
Sbjct: 238 --APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVW 294
Query: 572 GALLGAARIYKNVE 585
ALL + K E
Sbjct: 295 TALLSGYSLNKKHE 308
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 450 IDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCA 509
ID+A F+++P + ++ MI G + R +AL +F +M V ++ S++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMISG 106
Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
C G + A F+ M ++ + + M++ R+GK +A L MP + A+
Sbjct: 107 CVECGDMNTAVKLFDEMPERSVVS-----WTAMVNGCFRSGKVDQAERLFYQMPVKDTAA 161
Query: 570 VWGALL 575
W +++
Sbjct: 162 -WNSMV 166
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/534 (41%), Positives = 339/534 (63%), Gaps = 5/534 (0%)
Query: 238 LVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFD 297
L++MY K +++A +F MP++N+I+W +IS + + +A L M R+ V +
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
T S+VL+S + + +H +K ESD ++ ++LID + K G EDA+ +F
Sbjct: 162 VYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
E D + S+I +AQ + AL+L+ M+ + +S+L AC L+ E
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
G Q HVHI+K+ D N+LV+MY KCGS++DA R F+++ +R +++WS MI GLAQ
Sbjct: 279 GMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
+G +EAL++F +M G PN+IT+V VL AC+HAGL+ + ++F SM+K +GI P++E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 538 HYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAI 597
HY CMID+LG+AGK +A++L++ M + +A W LLGA R+ +N+ + ++AA+ + A+
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
Query: 598 EPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRS 657
+PE + T+ LLSNIYA++ WD+V ++R M+D +KKEPG SWIEV +++ F +GD S
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNS 516
Query: 658 HARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP 717
H + E+ KL+++ L GYVP L D+E + E L HHSEKLA+AFGL+ P
Sbjct: 517 HPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLP 576
Query: 718 PGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
IR++KNLRIC DCH + SK+ R I++RD R+HHF++G CSCG YW
Sbjct: 577 IEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 230/470 (48%), Gaps = 49/470 (10%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
++K C S + + G + + F G F+ N L+ MY K D+ +LFD +P+R+
Sbjct: 67 LIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRN 126
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
V+SW ++ S Y C ++A+ M+ +RPN ++ SS++ +C G D R +H
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHC 183
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
IK G +SD+F +AL+D++AK+G EDA++VF ++ D + WN++I G + +D
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
AL+LF++MK + T TS L+AC G+ L ELG Q H ++K + D I+ LVD
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVD 301
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MY KCGS+++A +F+ M E+++I W+ +ISG QNG EA LF M G + T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESS 360
+ VL A S E Y S+ YG D V+
Sbjct: 362 IVGVL---------------FACSHAGLLEDGWYYFRSMKKLYGI-----DPVR------ 395
Query: 361 AVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACA-----NLSAY 415
+ C MI + G ++A+KL EM E PD+ +LL AC L+ Y
Sbjct: 396 --EHYGC--MIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEY 448
Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGI 465
K + + D L N+YA D + + + DRGI
Sbjct: 449 AAKKVIALD------PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/670 (35%), Positives = 379/670 (56%), Gaps = 2/670 (0%)
Query: 4 ACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVS 63
AC+S + L G ++H ++ + D + N ++ MY KCG+ D+R +FD +PER++VS
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 64 WNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSI 123
+ S+ + Y EA+ + +M+ + P++F+ S+I ACA S D LG+++H I
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 124 KLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALK 183
KL S + + NAL+ MY + + DA VF I D++SW+++IAG AL
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 184 LFQQMKSSEI-NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMY 242
++M S + +PN + + S+LKAC+ + + G Q+H IK E+ + I G L DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 243 AKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLS 302
A+CG ++ AR +F + + +WN++I+G NG EA S+F M G D +L
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 303 TVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE-SSA 361
++L + A+ Q+H+ +K F +D + NSL+ Y C + +F++ +
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 362 VDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQV 421
D V+ +++TA Q E L+L+ M E PD +LL C +S+ + G QV
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 422 HVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRG 481
H + +K G + F N L++MYAKCGS+ A R F + +R +VSWS +I G AQ G G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555
Query: 482 KEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYAC 541
+EAL +F +M G+ PNH+T V VL AC+H GLV E + +M+ + GI P +EH +C
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615
Query: 542 MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEK 601
++D+L RAG+ EA +D M + + VW LL A + NV + Q AAE + I+P
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFN 675
Query: 602 SSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARS 661
S+ HVLL +++AS+G W+N A +R MK + +KK PG SWIE++DK++ F D H
Sbjct: 676 STAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPER 735
Query: 662 KEIYAKLDEV 671
+IY L +
Sbjct: 736 DDIYTVLHNI 745
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 240/485 (49%), Gaps = 8/485 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
++KAC S D+ LG Q+H V+ S N+L+ MY + D+ R+F IP +
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGRKIH 119
++SW+S+ + + F EA+ KEM+ G+ PNE+ S + AC+ G +IH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
G IK + + +L DMYA+ G L A VF IE PD SWN +IAG + + D
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
A+ +F QM+SS P+ + S L A G Q+H +IK +D V L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 240 DMYAKCGSMDEARMIFH-LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
MY C + +F + ++WN +++ LQ+ +E LF M D
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
T+ +L+ ++ + QVH S+KT + +I N LID Y KCG + A +IF
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
D+V+ +++I YAQ G GEEAL L+ EM+ I P+ +L AC+++ E+G
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 419 KQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDRGIVSWSAMIGG 474
+++ + + G + +V++ A+ G +++A+R E+ PD +V W ++
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD--VVVWKTLLSA 651
Query: 475 LAQHG 479
G
Sbjct: 652 CKTQG 656
Score = 219 bits (558), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 237/478 (49%), Gaps = 6/478 (1%)
Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
S+I AC+ S GRKIH + + D N ++ MY K G+L DA VF +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
++VS+ +VI G + A++L+ +M ++ P+ F + S +KACA LG+QLH
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
+IK+E S I L+ MY + M +A +F+ +P K+LI+W+ +I+G Q G +
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 281 EAASLFPWMYREGVGF-DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSL 339
EA S M GV ++ + LK+ +S Q+H L +K+ + SL
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 340 IDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDS 399
D Y +CG + A ++F + D + +I A G +EA+ ++ +M+ PD+
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371
Query: 400 FVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 459
SLL A A QG Q+H +IIK+GF++D NSL+ MY C + F +
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 460 IPDRG-IVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH-AGLVA 517
+ VSW+ ++ QH + E L++F ML P+HIT+ ++L C + L
Sbjct: 432 FRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 491
Query: 518 EAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALL 575
++ H S+ K G+ P Q +ID+ + G +A + D+M + S W L+
Sbjct: 492 GSQVHCYSL--KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS-WSTLI 546
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 182/324 (56%), Gaps = 5/324 (1%)
Query: 189 KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSM 248
K+S + TY S + AC+ GR++H ++ K D I+ ++ MY KCGS+
Sbjct: 59 KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 118
Query: 249 DEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSV 308
+AR +F MPE+NL+++ VI+G+ QNG EA L+ M +E + DQ +++K+
Sbjct: 119 RDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
Query: 309 ASFQAIGVCKQVHALSVKTAFESDDYIV--NSLIDAYGKCGHVEDAVKIFKESSAVDLVA 366
AS +G+ KQ+HA +K ES +++ N+LI Y + + DA ++F DL++
Sbjct: 179 ASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236
Query: 367 CTSMITAYAQFGLGEEALKLYLEMQDREI-NPDSFVCSSLLNACANLSAYEQGKQVHVHI 425
+S+I ++Q G EAL EM + +P+ ++ S L AC++L + G Q+H
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 426 IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEAL 485
IK + AG SL +MYA+CG ++ A R F +I SW+ +I GLA +G EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 486 QMFGQMLEDGVLPNHITLVSVLCA 509
+F QM G +P+ I+L S+LCA
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCA 380
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 219/460 (47%), Gaps = 49/460 (10%)
Query: 2 LKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSV 61
LKAC+S G Q+HG+ + + + SL MYA+CG +RR+FD I
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 62 VSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLL--GRKIH 119
SWN + + + + +EAV F +M SG P+ SL S++ CA + L G +IH
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGMQIH 394
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
Y IK G+ +D+ N+L+ MY +L +F+D + D VSWN ++ C+ HE
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
L+LF+ M SE P+ T + L+ C + +LG Q+HC +K + + + GL
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+DMYAKCGS+ +AR IF M +++++W+ +I G+ Q+G EA LF M G+ +
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
T VL + C V G VE+ +K++
Sbjct: 575 VTFVGVLTA---------CSHV--------------------------GLVEEGLKLYAT 599
Query: 359 SSAVDLVA-----CTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
++ C+ ++ A+ G EA + EM+ + PD V +LL+AC
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSACKTQG 656
Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDA 453
++ +I+K + T A L +M+A G+ ++A
Sbjct: 657 NVHLAQKAAENILKIDPFNST-AHVLLCSMHASSGNWENA 695
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 121/213 (56%), Gaps = 1/213 (0%)
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
T +++ + +S +++ +++H + + + D + N ++ YGKCG + DA ++F
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
+LV+ TS+IT Y+Q G G EA++LYL+M ++ PD F S++ ACA+ S GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
Q+H +IK S A N+L+ MY + + DA R F IP + ++SWS++I G +Q G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 480 RGKEALQMFGQMLEDGVL-PNHITLVSVLCACN 511
EAL +ML GV PN S L AC+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/657 (39%), Positives = 389/657 (59%), Gaps = 19/657 (2%)
Query: 128 DSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQ 187
+ ++FS N +V YAK + A +F +I PD VS+N +I+G A+ LF++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 188 MKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGS 247
M+ + FT + + AC + +L +QLHC + S V V Y+K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 248 MDEARMIFHLMPE-KNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLK 306
+ EA +F+ M E ++ ++WN +I + Q+ +A +L+ M +G D TL++VL
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 307 SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVE---DAVKIFKESSAVD 363
++ S + +Q H +K F + ++ + LID Y KCG + D+ K+F+E + D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 364 LVACTSMITAYA-QFGLGEEALKLYLEMQDREINPD--SFVCSSLLNACANLSAYEQGKQ 420
LV +MI+ Y+ L EEA+K + +MQ PD SFVC + +AC+NLS+ Q KQ
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC--VTSACSNLSSPSQCKQ 366
Query: 421 VHVHIIKFGFMSDTFA-GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
+H IK S+ + N+L+++Y K G++ DA F +P+ VS++ MI G AQHG
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 480 RGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHY 539
G EAL ++ +ML+ G+ PN IT V+VL AC H G V E + +F +M++ F I+P EHY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 540 ACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEP 599
+CMID+LGRAGK +EA +D MP++ + W ALLGA R +KN+ + + AA L ++P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 600 EKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHA 659
++ +V+L+N+YA A W+ +A VR+ M+ +++K+PG SWIEVK K + F D SH
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Query: 660 RSKEIYAKLDEVSDLLNKAGYV-----PMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
+E+ L+E+ + K GYV MV+ D E ++E L HHSEKLAVAFGL+
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDE--AGEGDEEMRLGHHSEKLAVAFGLM 664
Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
+T G + V KNLRIC DCH + +F+S + REIIVRD RFH F++G CSCG YW
Sbjct: 665 STRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 258/523 (49%), Gaps = 53/523 (10%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCG---------------- 44
+L +++DLF G +H + V + S +++N V +Y+KCG
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 45 ----NFI------DS-----RRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVL 89
N I DS R+LFD IP+ VS+N+L S Y A+ FK M
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 90 SGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLED 149
G + F+LS +I AC D L +++H +S+ G+DS NA V Y+K G L +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 150 AVAVFKDI-EHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACA 208
AV+VF + E D VSWN++I H+ AL L+++M +MFT S L A
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 209 GMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD---EARMIFHLMPEKNLIA 265
++ GRQ H LIK + VG GL+D Y+KCG D ++ +F + +L+
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 266 WNIVISGHLQNGG-DMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALS 324
WN +ISG+ N EA F M R G D + V + ++ + CKQ+H L+
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 325 VKTAFESDDYIV-NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEA 383
+K+ S+ V N+LI Y K G+++DA +F ++ V+ MI YAQ G G EA
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 384 LKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA------- 436
L LY M D I P+ ++L+ACA+ ++G++ F M +TF
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY------FNTMKETFKIEPEAEH 485
Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMIGGLAQH 478
+ ++++ + G +++A+R +P + G V+W+A++G +H
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 203/411 (49%), Gaps = 19/411 (4%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPE-R 59
++ AC + DL Q+H V GFDS V N+ V Y+K G ++ +F + E R
Sbjct: 146 LIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
VSWNS+ Y +A+ +KEM+ G + + F+L+S++NA + GR+ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLE---DAVAVFKDIEHPDIVSWNAVIAGCVLHE 176
G IK G+ + + L+D Y+K G + D+ VF++I PD+V WN +I+G ++E
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 177 H-NDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI-V 234
++ A+K F+QM+ P+ ++ AC+ + +Q+H IK I S+ I V
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
L+ +Y K G++ +AR +F MPE N +++N +I G+ Q+G EA L+ M G+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAF----ESDDYIVNSLIDAYGKCGHVE 350
++ T VL + A + Q + ++K F E++ Y + +ID G+ G +E
Sbjct: 444 APNKITFVAVLSACAHCGKVDE-GQEYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKLE 500
Query: 351 DAVKIFK----ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINP 397
+A + + +V A + L E A + MQ P
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
GK +H +K S T+ N VN+Y+KCG + A AF + + S++ ++ A+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVS 505
+ A Q+F ++ + + ++ TL+S
Sbjct: 87 DSKIHIARQLFDEIPQPDTV-SYNTLIS 113
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 363/640 (56%), Gaps = 38/640 (5%)
Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
L+ YA + ++ A VF +I +++ N +I V + +K+F M + P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
+T+ LKAC+ +GR++H S K+ + S VG GLV MY KCG + EAR++
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
M +++++WN ++ G+ QN +A + M + D T++++L +V++ V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
+ VK F K+ K+S LV+ MI Y +
Sbjct: 260 ------MYVKDMF-----------------------FKMGKKS----LVSWNVMIGVYMK 286
Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
+ EA++LY M+ PD+ +S+L AC + SA GK++H +I + + +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
N+L++MYAKCG ++ A F + R +VSW+AMI GRG +A+ +F ++ + G+
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 497 LPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAM 556
+P+ I V+ L AC+HAGL+ E + F+ M + I P EH ACM+D+LGRAGK +EA
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 557 ELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAG 616
+ M + N VWGALLGA R++ + ++G AA+ LF + PE+S +VLLSNIYA AG
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526
Query: 617 MWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLN 676
W+ V +R MK LKK PG S +EV ++TF VGDRSH +S EIY +LD + +
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Query: 677 KAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIATP-----PGATIRVKKNLRIC 731
+ GYVP E+ LHDVEE +KE L HSEKLA+ F L+ T TIR+ KNLRIC
Sbjct: 587 ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRIC 646
Query: 732 VDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
DCH + + IS+I SREII+RD NRFH FR G CSCG YW
Sbjct: 647 GDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 265/552 (48%), Gaps = 80/552 (14%)
Query: 17 VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
VH ++ + + L+ YA + +R++FD IPER+V+ N + YV+ F
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 77 LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANA 136
E V F M +RP+ ++ ++ AC+ SG ++GRKIHG + K+G S +F N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 137 LVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPN 196
LV MY K G L +A V ++ D+VSWN+++ G ++ D AL++ ++M+S +I+ +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 197 MFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFH 256
T S L A + + + M +K DM+ K G
Sbjct: 241 AGTMASLLPAVSNTTTENV----------MYVK----------DMFFKMG---------- 270
Query: 257 LMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGV 316
+K+L++WN++I +++N +EA L+ M +G D ++++VL + A+ +
Sbjct: 271 ---KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 317 CKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQ 376
K++H + + + N+LID Y KCG +E A +F+ + D+V+ T+MI+AY
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 377 FGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFA 436
G G +A+ L+ ++QD + PDS + L AC++ E+G+ F M+D +
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC------FKLMTDHY- 440
Query: 437 GNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGV 496
+I R + + M+ L + G+ KEA + M +
Sbjct: 441 ----------------------KITPR-LEHLACMVDLLGRAGKVKEAYRFIQDM---SM 474
Query: 497 LPNHITLVSVLCACN-HA----GLVAEAKHHFESMEKKFGIQPMQE-HYACMIDILGRAG 550
PN ++L AC H+ GL+A +K F + P Q +Y + +I +AG
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAA--------DKLFQLAPEQSGYYVLLSNIYAKAG 526
Query: 551 KFQEAMELVDTM 562
+++E + + M
Sbjct: 527 RWEEVTNIRNIM 538
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 175/361 (48%), Gaps = 35/361 (9%)
Query: 217 RQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQN 276
R +H +I +++ + +GV L+ YA + AR +F +PE+N+I N++I ++ N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 277 GGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIV 336
G E +F M V D T VLK+ + I + +++H + K S ++
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 337 NSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREIN 396
N L+ YGKCG + +A + E S D+V+ S++ YAQ ++AL++ EM+ +I+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 397 PDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRA 456
D+ +SLL A +N + +V +K +M+ K G
Sbjct: 239 HDAGTMASLLPAVSNTTTE------NVMYVK--------------DMFFKMGK------- 271
Query: 457 FSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLV 516
+ +VSW+ MIG ++ EA++++ +M DG P+ +++ SVL AC +
Sbjct: 272 ------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 517 AEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLG 576
+ K +E+K I + A +ID+ + G ++A ++ + M + S W A++
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENA-LIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMIS 383
Query: 577 A 577
A
Sbjct: 384 A 384
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 52/370 (14%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VLKAC+ + +G ++HG G S FV N LV MY KCG ++R + D + R
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VVSWNSL Y ++A+ +EM S I+ AG+ SLL +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREME-----------SVKISHDAGTMASLLPAVSNT 254
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ + Y DMF FK + +VSWN +I + +
Sbjct: 255 TTENVMYVKDMF---------------------FK-MGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
A++L+ +M++ P+ + TS L AC LG+++H + + ++ + ++ L+D
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MYAKCG +++AR +F M +++++W +IS + +G +A +LF + G+
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL------ 406
Query: 301 LSTVLKSVASFQAIGVCKQVHALSV-KTAFE--SDDYIVNS-------LIDAYGKCGHVE 350
V S+A + C L ++ F+ +D Y + ++D G+ G V+
Sbjct: 407 ---VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 351 DAVKIFKESS 360
+A + ++ S
Sbjct: 464 EAYRFIQDMS 473
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 13/339 (3%)
Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFK 357
Q T+ + + + ++ I + VH+ + + + L+ AY V A K+F
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFD 98
Query: 358 ESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQ 417
E +++ MI +Y G E +K++ M + PD + +L AC+
Sbjct: 99 EIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158
Query: 418 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQ 477
G+++H K G S F GN LV+MY KCG + +A E+ R +VSW++++ G AQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 478 HGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQE 537
+ R +AL++ +M + + T+ S+L A ++ E + + M K G + +
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS 276
Query: 538 HYACMIDILGRAGKFQEAMELVDTMP---FQANASVWGALLGAARIYKNVEVGQHAAEML 594
+ MI + + EA+EL M F+ +A ++L A + +G+ ++
Sbjct: 277 -WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK---KIH 332
Query: 595 FAIEPEKSSTHVLLSN----IYASAGMWDNVAKVRRFMK 629
IE +K ++LL N +YA G + V MK
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/675 (35%), Positives = 385/675 (57%), Gaps = 6/675 (0%)
Query: 2 LKACTS--KKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
++AC+ + ++ Q+ +V +GFD D +V L+ Y K GN +R +FDA+PE+
Sbjct: 153 IQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
S V+W ++ S V ++ F +++ + P+ + LS++++AC+ G++IH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
+ ++ G + D N L+D Y K G + A +F + + +I+SW +++G + +
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHK 332
Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
A++LF M + P+M+ +S L +CA + G Q+H IK + +D V L+
Sbjct: 333 EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLI 392
Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDME---AASLFPWMYREGVGF 296
DMYAKC + +AR +F + +++ +N +I G+ + G E A ++F M +
Sbjct: 393 DMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRP 452
Query: 297 DQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
T ++L++ AS ++G+ KQ+H L K D + ++LID Y C ++D+ +F
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYE 416
E DLV SM Y Q EEAL L+LE+Q PD F ++++ A NL++ +
Sbjct: 513 DEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQ 572
Query: 417 QGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLA 476
G++ H ++K G + + N+L++MYAKCGS +DA +AF R +V W+++I A
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA 632
Query: 477 QHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQ 536
HG GK+ALQM +M+ +G+ PN+IT V VL AC+HAGLV + FE M +FGI+P
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPET 691
Query: 537 EHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFA 596
EHY CM+ +LGRAG+ +A EL++ MP + A VW +LL NVE+ +HAAEM
Sbjct: 692 EHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAIL 751
Query: 597 IEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDR 656
+P+ S + +LSNIYAS GMW KVR MK + KEPG SWI + +V+ F D+
Sbjct: 752 SDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDK 811
Query: 657 SHARSKEIYAKLDEV 671
SH ++ +IY LD++
Sbjct: 812 SHCKANQIYEVLDDL 826
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/589 (30%), Positives = 318/589 (53%), Gaps = 21/589 (3%)
Query: 17 VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDF 76
VHG ++ G + D +++N L+ +Y++ G + +R++F+ +PER++VSW+++ S H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 77 LEEAVCFFKEMVLSGI-RPNEFSLSSMINACAGSGDSLLGR------KIHGYSIKLGYDS 129
EE++ F E + PNE+ LSS I AC+G L GR ++ + +K G+D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSG----LDGRGRWMVFQLQSFLVKSGFDR 181
Query: 130 DMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMK 189
D++ L+D Y K GN++ A VF + V+W +I+GCV + +L+LF Q+
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 190 SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMD 249
+ P+ + ++ L AC+ + E G+Q+H +++ ++ D + L+D Y KCG +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 250 EARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVA 309
A +F+ MP KN+I+W ++SG+ QN EA LF M + G+ D S++L S A
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 310 SFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTS 369
S A+G QVHA ++K +D Y+ NSLID Y KC + DA K+F +A D+V +
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 370 MITAYAQFGLG---EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHII 426
MI Y++ G EAL ++ +M+ R I P SLL A A+L++ KQ+H +
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 427 KFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQ 486
K+G D FAG++L+++Y+ C + D+ F E+ + +V W++M G Q +EAL
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541
Query: 487 MFGQMLEDGVLPNHITLVSVLCAC-NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDI 545
+F ++ P+ T +++ A N A + + H + +++ P + ++D+
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDM 599
Query: 546 LGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
+ G ++A + D+ + W +++ + Y N G+ A +ML
Sbjct: 600 YAKCGSPEDAHKAFDSAA-SRDVVCWNSVISS---YANHGEGKKALQML 644
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 281/538 (52%), Gaps = 19/538 (3%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
VL AC+ L G Q+H ++ G + D + N L+ Y KCG I + +LF+ +P ++
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
++SW +L S Y +EA+ F M G++P+ ++ SS++ +CA G ++H
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCV------- 173
Y+IK +D + N+L+DMYAK L DA VF D+V +NA+I G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 174 LHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPI 233
LHE AL +F+ M+ I P++ T+ S L+A A + L +Q+H + K + D
Sbjct: 435 LHE----ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 234 VGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
G L+D+Y+ C + ++R++F M K+L+ WN + +G++Q + EA +LF +
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
D+ T + ++ + + ++ + ++ H +K E + YI N+L+D Y KCG EDA
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
K F +++ D+V S+I++YA G G++AL++ +M I P+ +L+AC++
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDR-GIVSWSAMI 472
E G + +++FG +T +V++ + G ++ A ++P + + W +++
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLL 730
Query: 473 GGLAQHGR---GKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESME 527
G A+ G + A +M +L D T++S + A G+ EAK E M+
Sbjct: 731 SGCAKAGNVELAEHAAEM--AILSDPKDSGSFTMLSNIYASK--GMWTEAKKVRERMK 784
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/597 (39%), Positives = 360/597 (60%), Gaps = 8/597 (1%)
Query: 183 KLFQQMK--SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
KL Q ++ S E +P+ TY + C ++H ++ DP + L+
Sbjct: 61 KLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIG 120
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTT 300
MY+ GS+D AR +F ++ + WN + G E L+ M R GV D+ T
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 301 LSTVLK----SVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF 356
+ VLK S + + K++HA + + S YI+ +L+D Y + G V+ A +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 357 KESSAVDLVACTSMITAYAQFGLGEEALKLYLEM--QDREINPDSFVCSSLLNACANLSA 414
++V+ ++MI YA+ G EAL+ + EM + ++ +P+S S+L ACA+L+A
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
EQGK +H +I++ G S ++LV MY +CG ++ R F + DR +VSW+++I
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQP 534
HG GK+A+Q+F +ML +G P +T VSVL AC+H GLV E K FE+M + GI+P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 535 MQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEML 594
EHYACM+D+LGRA + EA ++V M + VWG+LLG+ RI+ NVE+ + A+ L
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 595 FAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVG 654
FA+EP+ + +VLL++IYA A MWD V +V++ ++ L+K PG W+EV+ K+Y+F
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSV 540
Query: 655 DRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLI 714
D + ++I+A L ++++ + + GY+P + L+++E EKE+++ HSEKLA+AFGLI
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600
Query: 715 ATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
T G IR+ KNLR+C DCH +FISK + +EI+VRDVNRFH F+NG CSCG YW
Sbjct: 601 NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 195/394 (49%), Gaps = 8/394 (2%)
Query: 94 PNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAV 153
P++ + +I C ++H + + G D D F A L+ MY+ +G+++ A V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 154 FKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGME-- 211
F I WNA+ L H + L L+ +M + + FTYT LKAC E
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 212 LKEL--GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIV 269
+ L G+++H L + S + LVDMYA+ G +D A +F MP +N+++W+ +
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 270 ISGHLQNGGDMEAASLFPWMYREG--VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKT 327
I+ + +NG EA F M RE + T+ +VL++ AS A+ K +H ++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 328 AFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLY 387
+S ++++L+ YG+CG +E ++F D+V+ S+I++Y G G++A++++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 388 LEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIK-FGFMSDTFAGNSLVNMYAK 446
EM +P S+L AC++ E+GK++ + + G +V++ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 447 CGSIDDADRAFSEI-PDRGIVSWSAMIGGLAQHG 479
+D+A + ++ + G W +++G HG
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 219/475 (46%), Gaps = 56/475 (11%)
Query: 5 CTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSW 64
C + L L+VH ++ G D D F+A L+ MY+ G+ +R++FD +R++ W
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 65 NSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGS----GDSLLGRKIHG 120
N+LF EE + + +M G+ + F+ + ++ AC S + G++IH
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ + GY S ++ LVDMYA+ G ++ A VF + ++VSW+A+IA +
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 181 ALKLFQQM--KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
AL+ F++M ++ + +PN T S L+ACA + E G+ +H +++ + S V L
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
V MY +CG ++ + +F M ++++++WN +IS + +G +A +F M G
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSV-KTAFES--DDYIVNSLIDAYGKCGHVEDAVKI 355
T +VL G C + K FE+ D+ + I+ Y
Sbjct: 387 VTFVSVL---------GACSHEGLVEEGKRLFETMWRDHGIKPQIEHY------------ 425
Query: 356 FKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNAC---ANL 412
+ VDL+ + + +EA K+ +QD P V SLL +C N+
Sbjct: 426 ---ACMVDLLGRANRL---------DEAAKM---VQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
E+ + + + AGN L ++YA+ D+ R + RG+
Sbjct: 471 ELAERASR------RLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 9/291 (3%)
Query: 1 VLKACTSKK----DLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAI 56
VLKAC + + L G ++H + G+ S ++ +LV MYA+ G + +F +
Sbjct: 184 VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM 243
Query: 57 PERSVVSWNSLFSCYVHCDFLEEAVCFFKEMV--LSGIRPNEFSLSSMINACAGSGDSLL 114
P R+VVSW+++ +CY EA+ F+EM+ PN ++ S++ ACA
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
G+ IHGY ++ G DS + +ALV MY + G LE VF + D+VSWN++I+ +
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-IKSDPI 233
H + A+++F++M ++ +P T+ S L AC+ L E G++L ++ + IK
Sbjct: 364 HGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIE 423
Query: 234 VGVGLVDMYAKCGSMDE-ARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAA 283
+VD+ + +DE A+M+ + E W ++ G + G++E A
Sbjct: 424 HYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCRIHGNVELA 473
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 13/245 (5%)
Query: 381 EEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSL 440
E LK + + +E +P L+ C + S+ +VH HI+ G D F L
Sbjct: 59 EGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKL 118
Query: 441 VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
+ MY+ GS+D A + F + R I W+A+ L G G+E L ++ +M GV +
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178
Query: 501 ITLVSVLCAC-------NHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQ 553
T VL AC NH E H + M ++D+ R G
Sbjct: 179 FTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM----TTLVDMYARFGCVD 234
Query: 554 EAMELVDTMPFQANASVWGALLGA-ARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIY 612
A + MP + N W A++ A+ K E + EM+ + ++ ++S +
Sbjct: 235 YASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQ 293
Query: 613 ASAGM 617
A A +
Sbjct: 294 ACASL 298
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/562 (40%), Positives = 346/562 (61%), Gaps = 7/562 (1%)
Query: 217 RQLHCSLIKMEIK-SDPIVGVGLVDMYAKCGS---MDEARMIFHLMPEK-NLIAWNIVIS 271
RQ+H I+ + SD +G L+ S M A +F + + N+ WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 272 GHLQNGGDMEAASLFPWMYREG-VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE 330
G+ + G + A SL+ M G V D T ++K+V + + + + +H++ +++ F
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 331 SDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEM 390
S Y+ NSL+ Y CG V A K+F + DLVA S+I +A+ G EEAL LY EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 391 QDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSI 450
+ I PD F SLL+ACA + A GK+VHV++IK G + + N L+++YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 451 DDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE-DGVLPNHITLVSVLCA 509
++A F E+ D+ VSW+++I GLA +G GKEA+++F M +G+LP IT V +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 510 CNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANAS 569
C+H G+V E +F M +++ I+P EH+ CM+D+L RAG+ ++A E + +MP Q N
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 570 VWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMK 629
+W LLGA ++ + ++ + A + +EP S +VLLSN+YAS W +V K+R+ M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 630 DNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLH 689
+ +KK PG S +EV ++V+ F +GD+SH +S IYAKL E++ L GYVP +
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 690 DVEESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREI 749
DVEE EKE + +HSEK+A+AF LI+TP + I V KNLR+C DCH + + +SK+ +REI
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 750 IVRDVNRFHHFRNGSCSCGGYW 771
+VRD +RFHHF+NGSCSC YW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 165/274 (60%), Gaps = 5/274 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
++KA T+ D+ LG +H +V+ +GF S +V NSL+ +YA CG+ + ++FD +PE+
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
+V+WNS+ + + EEA+ + EM GI+P+ F++ S+++ACA G LG+++H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
Y IK+G ++ S+N L+D+YA+ G +E+A +F ++ + VSW ++I G ++
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 181 ALKLFQQMKSSE-INPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDP-IVGVG- 237
A++LF+ M+S+E + P T+ L AC+ + + G + + ++ E K +P I G
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGC 365
Query: 238 LVDMYAKCGSMDEARMIFHLMP-EKNLIAWNIVI 270
+VD+ A+ G + +A MP + N++ W ++
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 192/403 (47%), Gaps = 29/403 (7%)
Query: 116 RKIHGYSIKLGYD-SDMFSANALVDMYAKVGN---LEDAVAVFKDIEHP-DIVSWNAVIA 170
R+IH +SI+ G SD L+ + + + A VF IE P ++ WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 171 GCVLHEHNDWALKLFQQMK-SSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIK 229
G ++ A L+++M+ S + P+ TY +KA M LG +H +I+
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 230 SDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM 289
S V L+ +YA CG + A +F MPEK+L+AWN VI+G +NG EA +L+ M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 290 YREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHV 349
+G+ D T+ ++L + A A+ + K+VH +K + + N L+D Y +CG V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 350 EDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDRE-INPDSFVCSSLLNA 408
E+A +F E + V+ TS+I A G G+EA++L+ M+ E + P +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 409 CANLSAYEQG----------KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFS 458
C++ ++G ++ I FG M V++ A+ G + A
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM---------VDLLARAGQVKKAYEYIK 384
Query: 459 EIP-DRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNH 500
+P +V W ++G HG A Q+L+ + PNH
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ--LEPNH 425
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 186/415 (44%), Gaps = 50/415 (12%)
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSG-IRPNEFSLSSMINACAGSGDSLLGRKI 118
+V WN+L Y A ++EM +SG + P+ + +I A D LG I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 119 HGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHN 178
H I+ G+ S ++ N+L+ +YA G++ A VF + D+V+WN+VI G +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 179 DWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGL 238
+ AL L+ +M S I P+ FT S L ACA + LG+++H +IK+ + + L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWM-YREGVGFD 297
+D+YA+CG ++EA+ +F M +KN ++W +I G NG EA LF +M EG+
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 298 QTTLSTVLKSVASFQAIGVCKQVHALSVKTAFE-----SDDYIVNSLIDAYGKCGHVEDA 352
+ T +L + + H VK FE ++Y + I+ +G
Sbjct: 324 EITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFG-------- 364
Query: 353 VKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANL 412
VDL+A + K Y ++ + P+ + +LL AC
Sbjct: 365 -------CMVDLLARAGQVK------------KAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 413 SAYEQGKQVHVHIIKFGFMSDTFAGNS--LVNMYAKCGSIDDADRAFSEIPDRGI 465
+ + + I++ + +G+ L NMYA D + ++ G+
Sbjct: 406 GDSDLAEFARIQILQ---LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 396/698 (56%), Gaps = 4/698 (0%)
Query: 1 VLKACTSKKDLFLGLQ-VHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER 59
++KAC + K+ F G+ + V G D +EFVA+SL+ Y + G +LFD + ++
Sbjct: 144 LVKACVALKN-FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 60 SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIH 119
V WN + + Y C L+ + F M + I PN + +++ CA LG ++H
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHND 179
G + G D + N+L+ MY+K G +DA +F+ + D V+WN +I+G V +
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 180 WALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLV 239
+L F +M SS + P+ T++S L + + E E +Q+HC +++ I D + L+
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 240 DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQT 299
D Y KC + A+ IF +++ + +ISG+L NG +++ +F W+ + + ++
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
TL ++L + A+ + +++H +K F++ I ++ID Y KCG + A +IF+
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
S D+V+ SMIT AQ A+ ++ +M I D S+ L+ACANL + GK
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 420 QVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHG 479
+H +IK SD ++ ++L++MYAKCG++ A F + ++ IVSW+++I HG
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622
Query: 480 RGKEALQMFGQMLE-DGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
+ K++L +F +M+E G+ P+ IT + ++ +C H G V E F SM + +GIQP QEH
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682
Query: 539 YACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIE 598
YAC++D+ GRAG+ EA E V +MPF +A VWG LLGA R++KNVE+ + A+ L ++
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLD 742
Query: 599 PEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSH 658
P S +VL+SN +A+A W++V KVR MK+ +++K PG SWIE+ + + F GD +H
Sbjct: 743 PSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNH 802
Query: 659 ARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDVEESEK 696
S IY+ L+ + L GY+P LH E S K
Sbjct: 803 PESSHIYSLLNSLLGELRLEGYIPQPYLPLHP-ESSRK 839
Score = 283 bits (724), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 301/587 (51%), Gaps = 20/587 (3%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPER- 59
+L+AC++ L G QVH ++ D + ++ MYA CG+F D ++F + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 60 -SVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAG----SGDSLL 114
S+ WNS+ S +V L +A+ F+ +M+ G+ P+ + ++ AC G L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 115 GRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
+ LG D + F A++L+ Y + G ++ +F + D V WN ++ G
Sbjct: 161 SDTVSS----LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
D +K F M+ +I+PN T+ L CA L +LG QLH ++ + + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 235 GVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGV 294
L+ MY+KCG D+A +F +M + + WN +ISG++Q+G E+ + F M GV
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 295 GFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVK 354
D T S++L SV+ F+ + CKQ+H ++ + D ++ ++LIDAY KC V A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 355 IFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSA 414
IF + ++VD+V T+MI+ Y GL ++L+++ + +I+P+ S+L L A
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 415 YEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGG 474
+ G+++H IIK GF + G ++++MYAKCG ++ A F + R IVSW++MI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 475 LAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAE----AKHHFESMEKKF 530
AQ A+ +F QM G+ + +++ + L AC A L +E A H F K
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSESFGKAIHGF---MIKH 571
Query: 531 GIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
+ + +ID+ + G + AM + TM + N W +++ A
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAA 617
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 211/434 (48%), Gaps = 16/434 (3%)
Query: 76 FLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSAN 135
FLEE + P SL ++ AC+ G+++H + I D ++
Sbjct: 29 FLEETI------------PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74
Query: 136 ALVDMYAKVGNLEDAVAVFK--DIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEI 193
++ MYA G+ D +F D+ I WN++I+ V + + AL + +M +
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 194 NPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARM 253
+P++ T+ +KAC ++ + L ++ + + + V L+ Y + G +D
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 254 IFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQA 313
+F + +K+ + WN++++G+ + G F M + + + T VL AS
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 314 IGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITA 373
I + Q+H L V + + + I NSL+ Y KCG +DA K+F+ S D V MI+
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 374 YAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSD 433
Y Q GL EE+L + EM + PD+ SSLL + + E KQ+H +I++ D
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 434 TFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLE 493
F ++L++ Y KC + A FS+ +V ++AMI G +G ++L+MF +++
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 494 DGVLPNHITLVSVL 507
+ PN ITLVS+L
Sbjct: 435 VKISPNEITLVSIL 448
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 10/282 (3%)
Query: 301 LSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIF---- 356
LS +L++ ++ + KQVHA + + D Y ++ Y CG D K+F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 357 -KESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAY 415
+ SS + S+I+++ + GL +AL Y +M ++PD L+ AC L +
Sbjct: 98 LRRSS---IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 416 EQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGL 475
+ + + G + F +SL+ Y + G ID + F + + V W+ M+ G
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 476 AQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPM 535
A+ G ++ F M D + PN +T VL C + L+ + + G+
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC-ASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 536 QEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
++ + + G+F +A +L M +A+ W ++
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/800 (30%), Positives = 430/800 (53%), Gaps = 75/800 (9%)
Query: 12 FLGLQVHGIVVFTGFD-SDEFVANSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSC 70
FLGL +HG ++ G D SD V ++ + Y +C + + +LFD +P+R ++WN +
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 71 YVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSD 130
+ E+AV F+EM SG + + ++ ++ C+ GR+IHGY ++LG +S+
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 131 MFSANALVDMYAKVGNLE-------------------------------DAVAVFKDIE- 158
+ N+L+ MY++ G LE DA+ + ++E
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 159 ---HPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKEL 215
PDIV+WN++++G + A+ + ++M+ + + P+ + +S L+A A +L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 216 GRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQ 275
G+ +H +++ ++ D V L+DMY K G + ARM+F +M KN++AWN ++SG
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 276 NGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYI 335
+A +L M +EG+ D T
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITW---------------------------------- 329
Query: 336 VNSLIDAYGKCGHVEDAV----KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQ 391
NSL Y G E A+ K+ ++ A ++V+ T++ + ++ G ALK++++MQ
Sbjct: 330 -NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 392 DREINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSID 451
+ + P++ S+LL LS GK+VH ++ + D + +LV+MY K G +
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 452 DADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACN 511
A F I ++ + SW+ M+ G A GRG+E + F MLE G+ P+ IT SVL C
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 512 HAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVW 571
++GLV E +F+ M ++GI P EH +CM+D+LGR+G EA + + TM + +A++W
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568
Query: 572 GALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDN 631
GA L + +I++++E+ + A + L +EP S+ ++++ N+Y++ W++V ++R M++N
Sbjct: 569 GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
Query: 632 KLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
+++ + SWI++ V+ F ++H +IY +L ++ + K+GYVP D+
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDI 688
Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
+SEKE+LL H+EKLA+ +GLI A IRV KN IC D HT +++S + +REI++
Sbjct: 689 SDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVL 748
Query: 752 RDVNRFHHFRNGSCSCGGYW 771
++ R HHFR+G CSC W
Sbjct: 749 QEGARVHHFRDGKCSCNDSW 768
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 242/524 (46%), Gaps = 86/524 (16%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L+ C++K+ G Q+HG V+ G +S+ + NSL+VMY++ G SR++F+++ +R+
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 61 VVSWNSLFSCYVHCDFLE-----------------------------------EAVCFFK 85
+ SWNS+ S Y +++ +A+ K
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 86 EMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVG 145
M ++G++P+ S+SS++ A A G LG+ IHGY ++ D++ L+DMY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 146 NLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALK 205
L A VF ++ +IV+WN++++G +Y LK
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSG--------------------------LSYACLLK 308
Query: 206 ACAGMELKELGRQLHCSLIKME---IKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEK- 261
+ +I+ME IK D I L YA G ++A + M EK
Sbjct: 309 DAEAL------------MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 262 ---NLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIGVCK 318
N+++W + SG +NG A +F M EGVG + T+ST+LK + + K
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 319 QVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFG 378
+VH ++ D Y+ +L+D YGK G ++ A++IF L + M+ YA FG
Sbjct: 417 EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 476
Query: 379 LGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG-KQVHVHIIKFGFMSDTFAG 437
GEE + + M + + PD+ +S+L+ C N ++G K + ++G +
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 438 NSLVNMYAKCGSIDDA---DRAFSEIPDRGIVSWSAMIGGLAQH 478
+ +V++ + G +D+A + S PD I W A + H
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMSLKPDATI--WGAFLSSCKIH 578
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/699 (34%), Positives = 388/699 (55%), Gaps = 14/699 (2%)
Query: 77 LEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHGYSIKLGYDS-DMFSAN 135
L EA F +EM +G+ + +S + AC GR +H +++G ++ + N
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQN 122
Query: 136 ALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINP 195
++ MY + +LEDA +F ++ + VS +I+ D A+ LF M +S P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 196 NMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIF 255
YT+ LK+ + GRQ+H +I+ + S+ + G+V+MY KCG + A+ +F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 256 HLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQTTLSTVLKSVASFQAIG 315
M K +A ++ G+ Q G +A LF + EGV +D S VLK+ AS + +
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 316 VCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYA 375
+ KQ+HA K ES+ + L+D Y KC E A + F+E + V+ +++I+ Y
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 376 QFGLGEEALKLYLEMQDREINP-DSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDT 434
Q EEA+K + ++ + + +SF +S+ AC+ L+ G QVH IK +
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422
Query: 435 FAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLED 494
+ ++L+ MY+KCG +DDA+ F + + IV+W+A I G A +G EAL++F +M+
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 495 GVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQE 554
G+ PN +T ++VL AC+HAGLV + KH ++M +K+ + P +HY CMIDI R+G E
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 555 AMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYAS 614
A++ + MPF+ +A W L +KN+E+G+ A E L ++PE ++ +VL N+Y
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTW 602
Query: 615 AGMWDNVAKVRRFMKDNKLKKEPGMSWIEVKDKVYTFTVGDRSHARSKEIYAKLDEVSDL 674
AG W+ A++ + M + LKKE SWI+ K K++ F VGD+ H +++EIY KL E
Sbjct: 603 AGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGF 662
Query: 675 LNKAGYVPMVETDLHDVEESEKEQLLYHHSEKLAVAFGLIAT--PPGATIRVKKNLRICV 732
+ E D+ +E+ + L HSE+LA+AFGLI+ A I+V KNLR C
Sbjct: 663 M---------EGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACP 713
Query: 733 DCHTSFEFISKIVSREIIVRDVNRFHHFRNGSCSCGGYW 771
DCH + +S + EI++RD RFHHF+ G CSC YW
Sbjct: 714 DCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 247/508 (48%), Gaps = 10/508 (1%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+ +AC + L G +H + + + N ++ MY +C + D+ +LFD + E +
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKIHG 120
VS ++ S Y L++AV F M+ SG +P ++++ + GR+IH
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 121 YSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVLHEHNDW 180
+ I+ G S+ +V+MY K G L A VF + V+ ++ G
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 181 ALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIVGVGLVD 240
ALKLF + + + + F ++ LKACA +E LG+Q+H + K+ ++S+ VG LVD
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 241 MYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVG-FDQT 299
Y KC S + A F + E N ++W+ +ISG+ Q EA F + + +
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 300 TLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKES 359
T +++ ++ + + QVHA ++K + Y ++LI Y KCG ++DA ++F+
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448
Query: 360 SAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQGK 419
D+VA T+ I+ +A +G EAL+L+ +M + P+S ++L AC++ EQGK
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 420 Q-VHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIP-DRGIVSWSAMIGGLAQ 477
+ + K+ + ++++YA+ G +D+A + +P + +SW + G
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 478 HGR-------GKEALQMFGQMLEDGVLP 498
H G+E Q+ + VLP
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLP 596
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 238/510 (46%), Gaps = 54/510 (10%)
Query: 175 HEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKMEIKSDPIV 234
H + A + Q+M + ++ + ++Y +AC + GR LH ++M I++ ++
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVL 119
Query: 235 GVGLV-DMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREG 293
V MY +C S+++A +F M E N ++ +IS + + G +A LF M G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 294 VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAV 353
+ +T+LKS+ + +A+ +Q+HA ++ S+ I +++ Y KCG + A
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 354 KIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLS 413
++F + + VACT ++ Y Q G +ALKL++++ + DSFV S +L ACA+L
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 414 AYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIG 473
GKQ+H + K G S+ G LV+ Y KC S + A RAF EI + VSWSA+I
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 474 GLAQHGRGKEALQMFGQML-EDGVLPNHITLVSVLCACN-----------HA-------- 513
G Q + +EA++ F + ++ + N T S+ AC+ HA
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 514 ----------------GLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAME 557
G + +A FESM+ P + I G EA+
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMD-----NPDIVAWTAFISGHAYYGNASEALR 474
Query: 558 LVDTM---PFQANASVWGALLGAARIYKNVEVGQHAAEML---FAIEPEKSSTHVLLSNI 611
L + M + N+ + A+L A VE G+H + + + + P ++ +I
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI-DI 533
Query: 612 YASAGMWDNVAKVRRFMKDNKLKKEPGMSW 641
YA +G+ D K FMK+ + + MSW
Sbjct: 534 YARSGLLDEALK---FMKNMPFEPD-AMSW 559
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/740 (34%), Positives = 388/740 (52%), Gaps = 72/740 (9%)
Query: 41 AKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLS 100
++ G ++R+ FD++ +++ SWNS+ S Y +EA F EM
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM------------- 74
Query: 101 SMINACAGSGDSLLGRKIHGYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIEHP 160
+ ++ S N LV Y K + +A VF+ +
Sbjct: 75 --------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPER 108
Query: 161 DIVSWNAVIAGCVLHEHNDWALKLFQQMKSSEINPNMFTYTSALKACAGMELKELGRQLH 220
++VSW A++ G + A LF +M N ++T + R+L+
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 221 CSLIKMEIKSDPIVGVGLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDM 280
M D + ++ + G +DEAR+IF M E+N++ W +I+G+ QN
Sbjct: 165 ----DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 281 EAASLFPWMYREG--------VGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESD 332
A LF M + +G+ TLS ++ F + K V A
Sbjct: 221 VARKLFEVMPEKTEVSWTSMLLGY---TLSGRIEDAEEFFEVMPMKPVIA---------- 267
Query: 333 DYIVNSLIDAYGKCGHVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQD 392
N++I +G+ G + A ++F D MI AY + G EAL L+ +MQ
Sbjct: 268 ---CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 393 REINPDSFVCSSLLNACANLSAYEQGKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDD 452
+ + P S+L+ CA L++ + G+QVH H+++ F D + + L+ MY KCG +
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 453 ADRAFSEIPDRGIVSWSAMIGGLAQHGRGKEALQMFGQMLEDGVLPNHITLVSVLCACNH 512
A F + I+ W+++I G A HG G+EAL++F +M G +PN +TL+++L AC++
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444
Query: 513 AGLVAEAKHHFESMEKKFGIQPMQEHYACMIDILGRAGKFQEAMELVDTMPFQANASVWG 572
AG + E FESME KF + P EHY+C +D+LGRAG+ +AMEL+++M + +A+VWG
Sbjct: 445 AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWG 504
Query: 573 ALLGAARIYKNVEVGQHAAEMLFAIEPEKSSTHVLLSNIYASAGMWDNVAKVRRFMKDNK 632
ALLGA + + +++ + AA+ LF EP+ + T+VLLS+I AS W +VA VR+ M+ N
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNN 564
Query: 633 LKKEPGMSWIEVKDKVYTFTVGD-RSHARSKEIYAKLDEVSDLLNKAGYVPMVETDLHDV 691
+ K PG SWIEV KV+ FT G ++H I L++ LL +AGY P LHDV
Sbjct: 565 VSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDV 624
Query: 692 EESEKEQLLYHHSEKLAVAFGLIATPPGATIRVKKNLRICVDCHTSFEFISKIVSREIIV 751
+E EK L HSE+LAVA+GL+ P G IRV KNLR+C DCH + + ISK+ REII+
Sbjct: 625 DEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIIL 684
Query: 752 RDVNRFHHFRNGSCSCGGYW 771
RD NRFHHF NG CSC YW
Sbjct: 685 RDANRFHHFNNGECSCRDYW 704
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 63/497 (12%)
Query: 26 FDSDEFVA----NSLVVMYAKCGNFIDSRRLFDAIPERSVVSWNSLFSCYVHCDFLEEAV 81
FDS +F A NS+V Y G ++R+LFD + ER+VVSWN L S Y+ + EA
Sbjct: 40 FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEAR 99
Query: 82 CFFKEMVLSGIRPNEFSLSSMIN-----ACAGSGDSLLGRKIH----GYSIKLG------ 126
F+ M N S ++M+ G +SL R +++ G
Sbjct: 100 NVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG 155
Query: 127 --------YD----SDMFSANALVDMYAKVGNLEDAVAVFKDIEHPDIVSWNAVIAGCVL 174
YD D+ ++ ++ + G +++A +F ++ ++V+W +I G
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 175 HEHNDWALKLFQQM-KSSEINPNMFTYTSALKACAGMELKELGRQLHCSLIKME-----I 228
+ D A KLF+ M + +E+ ++TS L LG L + E +
Sbjct: 216 NNRVDVARKLFEVMPEKTEV-----SWTSML----------LGYTLSGRIEDAEEFFEVM 260
Query: 229 KSDPIVGV-GLVDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFP 287
P++ ++ + + G + +AR +F LM +++ W +I + + G ++EA LF
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 288 WMYREGVGFDQTTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCG 347
M ++GV +L ++L A+ ++ +QVHA V+ F+ D Y+ + L+ Y KCG
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 348 HVEDAVKIFKESSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLN 407
+ A +F S+ D++ S+I+ YA GLGEEALK++ EM P+ ++L
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 408 ACANLSAYEQGKQVHVHI-IKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEI---PDR 463
AC+ E+G ++ + KF + V+M + G +D A + PD
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500
Query: 464 GIVSWSAMIGGLAQHGR 480
+ W A++G H R
Sbjct: 501 TV--WGALLGACKTHSR 515
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 1 VLKACTSKKDLFLGLQVHGIVVFTGFDSDEFVANSLVVMYAKCGNFIDSRRLFDAIPERS 60
+L C + L G QVH +V FD D +VA+ L+ MY KCG + ++ +FD +
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 61 VVSWNSLFSCYVHCDFLEEAVCFFKEMVLSGIRPNEFSLSSMINACAGSGDSLLGRKI-H 119
++ WNS+ S Y EEA+ F EM SG PN+ +L +++ AC+ +G G +I
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 120 GYSIKLGYDSDMFSANALVDMYAKVGNLEDAVAVFKDIE-HPDIVSWNAVIAGCVLHEHN 178
K + + VDM + G ++ A+ + + + PD W A++ C H
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 179 DW----ALKLFQQ 187
D A KLF+
Sbjct: 517 DLAEVAAKKLFEN 529
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 145/341 (42%), Gaps = 61/341 (17%)
Query: 239 VDMYAKCGSMDEARMIFHLMPEKNLIAWNIVISGHLQNGGDMEAASLFPWMYREGVGFDQ 298
+ ++ G ++EAR F + K + +WN ++SG+ NG EA LF M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE------- 76
Query: 299 TTLSTVLKSVASFQAIGVCKQVHALSVKTAFESDDYIVNSLIDAYGKCGHVEDAVKIFKE 358
++V S+ N L+ Y K + +A +F+
Sbjct: 77 -------RNVVSW-------------------------NGLVSGYIKNRMIVEARNVFEL 104
Query: 359 SSAVDLVACTSMITAYAQFGLGEEALKLYLEMQDREINPDSFVCSSLLNACANLSAYEQG 418
++V+ T+M+ Y Q G+ EA L+ M +R + + + + ++
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160
Query: 419 KQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQH 478
++++ + + D A +++ + G +D+A F E+ +R +V+W+ MI G Q+
Sbjct: 161 RKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 479 GRGKEALQMFGQMLEDGVLPNHITLVSVLCACNHAGLVAEAKHHFESMEKKFGIQPMQEH 538
R A ++F M E ++ S+L +G + +A+ FE M PM+
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPV 265
Query: 539 YAC--MIDILGRAGKFQEAMELVDTMPFQANASVWGALLGA 577
AC MI G G+ +A + D M + NA+ W ++ A
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-WRGMIKA 305
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 59/232 (25%)
Query: 425 IIKFGFMSDTFAGNSL-VNMYAKCGSIDDADRAFSEIPDRGIVSWSAMIGGLAQHGRGKE 483
I++ +++ T S ++ ++ G I++A + F + + I SW++++ G +G KE
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 484 ALQMFGQMLEDGVLP---------------------------NHITLVSVLCACNHAGLV 516
A Q+F +M E V+ N ++ +++ G+V
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 517 AEAKHHFESMEKK------------------------FGIQPMQEHYAC--MIDILGRAG 550
EA+ F M ++ + + P+++ A MI L R G
Sbjct: 127 GEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG 186
Query: 551 KFQEAMELVDTMPFQANASVWGALLGAARIYKNVEVGQHAAEMLFAIEPEKS 602
+ EA + D M + N W ++ R V+V A LF + PEK+
Sbjct: 187 RVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKT 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 281,548,083
Number of Sequences: 539616
Number of extensions: 11679822
Number of successful extensions: 39183
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 28545
Number of HSP's gapped (non-prelim): 2621
length of query: 771
length of database: 191,569,459
effective HSP length: 125
effective length of query: 646
effective length of database: 124,117,459
effective search space: 80179878514
effective search space used: 80179878514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)