Query 046776
Match_columns 314
No_of_seqs 218 out of 1221
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:06:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046776.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046776hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 5E-79 1.7E-83 563.1 28.3 289 6-299 4-310 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 1.2E-76 4E-81 556.0 27.6 293 7-306 45-353 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 4.1E-77 1.4E-81 551.1 20.3 291 7-310 2-306 (319)
4 1odm_A Isopenicillin N synthas 100.0 4.6E-75 1.6E-79 540.6 28.1 286 1-297 1-323 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.8E-72 6.2E-77 518.7 18.6 269 7-300 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 6.3E-69 2.2E-73 488.1 26.9 253 7-299 2-278 (280)
7 3dkq_A PKHD-type hydroxylase S 94.8 0.05 1.7E-06 47.4 6.5 103 141-262 74-194 (243)
8 2hbt_A EGL nine homolog 1; pro 93.3 0.63 2.2E-05 40.4 10.5 186 28-263 14-213 (247)
9 2rg4_A Uncharacterized protein 93.1 1.2 4.1E-05 37.7 11.8 43 211-265 166-209 (216)
10 2jig_A Prolyl-4 hydroxylase; h 83.8 2 6.9E-05 36.3 6.2 47 213-263 170-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 82.4 3.4 0.00012 34.9 7.1 101 141-262 94-211 (216)
12 2iuw_A Alkylated repair protei 78.1 4.2 0.00014 34.9 6.3 84 166-261 127-228 (238)
13 3tht_A Alkylated DNA repair pr 75.6 2.6 8.9E-05 38.4 4.4 93 166-265 199-315 (345)
14 3s57_A Alpha-ketoglutarate-dep 71.2 10 0.00035 31.6 6.8 81 166-260 101-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 63.4 9.4 0.00032 32.1 5.0 80 166-261 106-201 (211)
16 2dbn_A Hypothetical protein YB 56.3 5.6 0.00019 37.5 2.5 55 5-67 97-151 (461)
17 1m5a_B Insulin B chain; alpha 46.1 23 0.00078 19.9 3.0 18 28-45 10-27 (30)
18 2opi_A L-fuculose-1-phosphate 45.9 12 0.00042 31.1 2.9 36 8-50 125-160 (212)
19 4ay7_A Methylcobalamin\: coenz 43.4 55 0.0019 29.2 7.1 41 27-67 304-348 (348)
20 1e4c_P L-fuculose 1-phosphate 39.2 16 0.00056 30.4 2.6 36 8-50 122-157 (215)
21 3o2g_A Gamma-butyrobetaine dio 38.9 19 0.00064 33.1 3.2 52 8-68 122-173 (388)
22 1pvt_A Sugar-phosphate aldolas 36.2 23 0.0008 29.9 3.2 37 7-50 160-196 (238)
23 3kt7_A PKHD-type hydroxylase T 35.4 82 0.0028 30.8 7.1 101 141-262 105-227 (633)
24 2fk5_A Fuculose-1-phosphate al 35.2 22 0.00077 29.3 2.8 50 8-64 117-175 (200)
25 1otj_A Alpha-ketoglutarate-dep 34.9 33 0.0011 29.6 4.0 49 8-66 17-65 (283)
26 2v9l_A Rhamnulose-1-phosphate 29.8 24 0.00081 30.7 2.2 36 8-50 179-214 (274)
27 1e5r_A Proline oxidase; oxidor 29.6 46 0.0016 29.3 4.0 21 241-261 155-175 (290)
28 2irp_A Putative aldolase class 28.8 26 0.00089 28.9 2.1 35 8-50 139-176 (208)
29 1oih_A Putative alkylsulfatase 27.5 57 0.0019 28.4 4.3 37 28-67 40-77 (301)
30 2da7_A Zinc finger homeobox pr 25.4 54 0.0018 22.4 2.8 39 121-159 13-52 (71)
31 3ocr_A Class II aldolase/adduc 24.4 44 0.0015 29.0 2.9 37 8-50 156-192 (273)
32 3pvj_A Alpha-ketoglutarate-dep 22.4 62 0.0021 27.9 3.5 50 8-67 15-64 (277)
33 1zav_A 50S ribosomal protein L 22.1 2E+02 0.0067 23.0 6.3 39 26-64 8-47 (180)
34 2vf9_A Coat protein; virion, R 21.8 23 0.00079 25.5 0.4 26 219-248 41-66 (131)
35 1wfx_A Probable RNA 2'-phospho 21.1 19 0.00065 29.6 -0.2 44 201-258 19-67 (186)
36 2j01_J 50S ribosomal protein L 20.7 2E+02 0.0069 22.8 6.0 39 26-64 6-46 (173)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=5e-79 Score=563.11 Aligned_cols=289 Identities=22% Similarity=0.311 Sum_probs=258.1
Q ss_pred CCCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCC-CCCCc
Q 046776 6 AQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNP-KPAHG 84 (314)
Q Consensus 6 ~~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 84 (314)
+.+||||||+.+ . .++++++++|.+||+++|||||+|||||.++++++++++++||+||.|+|+++... ..++|
T Consensus 4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~G 78 (312)
T 3oox_A 4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARG 78 (312)
T ss_dssp CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSE
T ss_pred CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccc
Confidence 678999999985 2 24678999999999999999999999999999999999999999999999999874 46789
Q ss_pred cccCCC-------CCCceeeeecccCCC--ccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-h
Q 046776 85 YMGKIS-------AFPLHEGMGIEYATN--RGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-K 154 (314)
Q Consensus 85 y~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 154 (314)
|.+.+. ..|++|.|.++.... ......+.+|.||+.+|+||+.+++|+++|.+|+..||++|+++||++ +
T Consensus 79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 158 (312)
T 3oox_A 79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD 158 (312)
T ss_dssp EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence 986553 258999999875322 112233457899999999999999999999999999999999999999 8
Q ss_pred hHHhhhcCcccceeeccccCCCCCCCCcccccccCCCCceEEecCCCCCcceecCCCceEEcCCCCCcEEEEhhhHHHHH
Q 046776 155 LYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAW 234 (314)
Q Consensus 155 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~ 234 (314)
+|.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++||||||+||+|
T Consensus 159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 99998888888999999999987555599999999999999999999999999999999999999999999999999999
Q ss_pred hCCcccCccceEecCC----CCceEEEEeccCCCc--ceecCcccCCCCCCCCCC-CcCHHHHHHHHhhccc
Q 046776 235 SNDRIKSCYHRVIVDG----PEVRYALGLFSFLSG--VIQTPEELVDDEHPLQYK-PFDHAGLLQFYLSNSD 299 (314)
Q Consensus 235 TnG~~ks~~HRVv~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~~ 299 (314)
|||+||||+|||++++ ..+|||++||++|+. +|.|+++|+++++|++|+ ++|++||+..|+++.+
T Consensus 239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~~ 310 (312)
T 3oox_A 239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIK 310 (312)
T ss_dssp TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHHC
T ss_pred hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHhc
Confidence 9999999999998764 467999999999998 999999999999999999 9999999999998654
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.2e-76 Score=556.01 Aligned_cols=293 Identities=24% Similarity=0.343 Sum_probs=261.1
Q ss_pred CCCceEECCCCCCCCCC-hhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCCC---CC
Q 046776 7 QKLPIVDLSQENLKPGS-SSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPK---PA 82 (314)
Q Consensus 7 ~~iPvIDls~l~l~~~~-~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~ 82 (314)
.+||+|||+.+ .+++ .+|++++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++.... .+
T Consensus 45 ~~iPvIDls~l--~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~ 122 (356)
T 1gp6_A 45 PQVPTIDLKNI--ESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 122 (356)
T ss_dssp CCCCEEECTTT--TCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBC
T ss_pred CCCCEEEchhc--cCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCc
Confidence 36999999985 3333 447789999999999999999999999999999999999999999999999997652 57
Q ss_pred CccccCCC-----CCCceeeeecccCCCccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-hhH
Q 046776 83 HGYMGKIS-----AFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-KLY 156 (314)
Q Consensus 83 ~Gy~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~ 156 (314)
+||..... ..|++|.|.++.... ....+|.||+.+|+||+.+++|+++|.+|+..||++|+++||++ ++|
T Consensus 123 ~Gy~~~~~~~~~~~~d~kE~~~~~~~p~----~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 198 (356)
T 1gp6_A 123 QGYGSKLANNASGQLEWEDYFFHLAYPE----EKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRL 198 (356)
T ss_dssp SEEECCCCCSTTCCCCSCEEEEEEEESG----GGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHH
T ss_pred cccCcCcccCCCCCCChhheeeeecCCc----cccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 89986542 358999999874321 11346789999999999999999999999999999999999999 999
Q ss_pred Hhhhc---CcccceeeccccCCCCCCCCcccccccCCCCceEEecCCCCCcceecCCCceEEcCCCCCcEEEEhhhHHHH
Q 046776 157 ESQKE---STTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMA 233 (314)
Q Consensus 157 ~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~ 233 (314)
.+.+. .+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+
T Consensus 199 ~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 199 EKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEI 277 (356)
T ss_dssp HHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHH
T ss_pred HHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEe-cCCcEEECcCCCCeEEEEeccHHHH
Confidence 88876 4778899999999998888899999999999999999999999997 6899999999999999999999999
Q ss_pred HhCCcccCccceEecCCCCceEEEEeccCCCc---ceecCcccCCCCCCCCCCCcCHHHHHHHHhhcccCCccccc
Q 046776 234 WSNDRIKSCYHRVIVDGPEVRYALGLFSFLSG---VIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERN 306 (314)
Q Consensus 234 ~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~---~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~k~~~~ 306 (314)
||||+||||+|||+.++..+|||++||++|+. +|.|+++|+++++|++|+++|++||+..++++..++|..-+
T Consensus 278 ~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~~~ 353 (356)
T 1gp6_A 278 LSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSE 353 (356)
T ss_dssp HTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC---
T ss_pred hcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchhhh
Confidence 99999999999999988889999999999988 58999999999999999999999999999988777665543
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.1e-77 Score=551.08 Aligned_cols=291 Identities=22% Similarity=0.303 Sum_probs=255.8
Q ss_pred CCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCCCCCCccc
Q 046776 7 QKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYM 86 (314)
Q Consensus 7 ~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~ 86 (314)
.+||+|||+.+ . .+++++++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l--~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKV--N--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALE 75 (319)
T ss_dssp CCCCEEEGGGG--G--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHT
T ss_pred CCCCEEECccc--C--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCC
Confidence 57999999985 3 234778999999999999999999999999999999999999999999999998543 34787
Q ss_pred cCCC---CCCceeeeecccCCCccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-hhHHhhhcC
Q 046776 87 GKIS---AFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-KLYESQKES 162 (314)
Q Consensus 87 ~~~~---~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~ 162 (314)
+.+. ..|++|.|.++.... ..+|.||+.+|+||+.+++|+++|.+|+..||++|+++||++ ++|.+.+..
T Consensus 76 ~~~~e~~~~d~ke~~~~~~~p~------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 149 (319)
T 1w9y_A 76 GVQAEVTDMDWESTFFLKHLPI------SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYG 149 (319)
T ss_dssp TCCCCGGGCCCCEEEEEEEESC------CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHT
T ss_pred cccccCCCCChhhheeeecCCc------ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcC
Confidence 6543 358999998874211 135789999999999999999999999999999999999999 999887753
Q ss_pred ---cccceeeccccCCCCCCCCcccccccCCCCceEEecC-CCCCcceecCCCceEEcCCCCCcEEEEhhhHHHHHhCCc
Q 046776 163 ---TTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSN-HVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDR 238 (314)
Q Consensus 163 ---~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~TnG~ 238 (314)
+.+.+|++|||||+.++...|+++|||+|+||||+|| +++||||+ ++|+|++|+|+||++||||||+||+||||+
T Consensus 150 ~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~ 228 (319)
T 1w9y_A 150 SKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228 (319)
T ss_dssp TTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred cCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHHhCCe
Confidence 5678999999999988788999999999999999995 79999995 799999999999999999999999999999
Q ss_pred ccCccceEecCCCCceEEEEeccCCCc--ceecCcccCCCC---CCCCCCCcCHHHHHHHHhhcccCCccc-cchhhc
Q 046776 239 IKSCYHRVIVDGPEVRYALGLFSFLSG--VIQTPEELVDDE---HPLQYKPFDHAGLLQFYLSNSDQNKGE-RNMMKA 310 (314)
Q Consensus 239 ~ks~~HRVv~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~---~p~~y~~~t~~e~~~~~~~~~~~~k~~-~~~~~~ 310 (314)
||||+|||+++++.+|||++||++|+. +|.|+++|++++ +|++|+++|++||+..++++...+|.. ++.+|+
T Consensus 229 ~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 229 YKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp SCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred eecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 999999999998889999999999998 999999999988 599999999999999999988887765 577665
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.6e-75 Score=540.63 Aligned_cols=286 Identities=20% Similarity=0.255 Sum_probs=252.9
Q ss_pred CCCCCCCCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHh-cCCCHHHHccccCC
Q 046776 1 MGSEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEEL-FDLPQETKMKNVNP 79 (314)
Q Consensus 1 m~~~~~~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~ 79 (314)
||+.+..+||+|||+.+ ..++.+++++++++|.+||+++|||||+|||| +++++++++++| |+||.|+|+++..
T Consensus 1 m~s~~~~~iPvIDls~l-~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~- 75 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPL-FGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI- 75 (331)
T ss_dssp --CCCBCCCCEEECGGG-GSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-
T ss_pred CCcccCCCCCEEEchHh-cCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-
Confidence 89988899999999985 23333457889999999999999999999999 999999999999 9999999999975
Q ss_pred CCCCccccCCC-------------CCCceeeeecccCCCc--ccc----ccccCCCCCCC--ChhHHHHHHHHHHHHHHH
Q 046776 80 KPAHGYMGKIS-------------AFPLHEGMGIEYATNR--GEC----EKFTSLMWPQG--NYQFCEVAHTYANIVAEL 138 (314)
Q Consensus 80 ~~~~Gy~~~~~-------------~~d~~E~~~~~~~~~~--~~~----~~~~~~~wP~~--~~~fr~~~~~y~~~~~~l 138 (314)
+||.+.+. ..|++|+|.++..... +.. ....+|.||+. +|+||+.+++|+++|.+|
T Consensus 76 ---~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l 152 (331)
T 1odm_A 76 ---RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGL 152 (331)
T ss_dssp ---TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHH
T ss_pred ---cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 68875432 3489999999853211 111 12347899997 999999999999999999
Q ss_pred HHHHHHHHHHHcCCc-hhHHhhhcCccccee--ecccc------C---CCCCCC-CcccccccCCCCceEEecCCCCCcc
Q 046776 139 QQLVMKMLFESYGIE-KLYESQKESTTYLLR--FLKYR------K---SQTDTT-NLAFKGHTDKSLVSILHSNHVKGLE 205 (314)
Q Consensus 139 ~~~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~HtD~g~lTlL~qd~~~GLq 205 (314)
+..||++|+++||++ ++|.+.++.+.+.+| ++||| | |++++. .+|+++|||+|+||||+||+++|||
T Consensus 153 ~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQ 232 (331)
T 1odm_A 153 SSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQ 232 (331)
T ss_dssp HHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEE
Confidence 999999999999999 999998888889999 99999 7 766665 8999999999999999999999999
Q ss_pred eecCCCceEEcCCCCCcEEEEhhhHHHHHhCCcccCccceEecCCCCceEEEEeccCCCc--ceecCcccCCCCCCCCCC
Q 046776 206 LRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSG--VIQTPEELVDDEHPLQYK 283 (314)
Q Consensus 206 V~~~~g~W~~V~p~pg~~vVnvGD~l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~ 283 (314)
|++++| |++|+|+||++||||||+||+||||+||||+|||+++ +.+|||++||++|+. +|.|+++++++++ ++|+
T Consensus 233 V~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~ 309 (331)
T 1odm_A 233 VETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDRE 309 (331)
T ss_dssp EEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSC
T ss_pred EEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCC
Confidence 998999 9999999999999999999999999999999999865 789999999999998 9999999999888 8999
Q ss_pred CcCHHHHHHHHhhc
Q 046776 284 PFDHAGLLQFYLSN 297 (314)
Q Consensus 284 ~~t~~e~~~~~~~~ 297 (314)
++|++||+..+++.
T Consensus 310 ~~t~~e~l~~~~~~ 323 (331)
T 1odm_A 310 PLSYGDYLQNGLVS 323 (331)
T ss_dssp CCBHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH
Confidence 99999999998874
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.8e-72 Score=518.74 Aligned_cols=269 Identities=15% Similarity=0.197 Sum_probs=232.9
Q ss_pred CCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCC-HHHHccccCC--CCCC
Q 046776 7 QKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLP-QETKMKNVNP--KPAH 83 (314)
Q Consensus 7 ~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~ 83 (314)
.+||||||+.+ .+++. .++|.+||+++|||||+|||||.++++++++++++||+|| .|+|+++... ..++
T Consensus 3 ~~iPvIDls~l--~~~~~-----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 3 TTVPTFSLAEL--QQGLH-----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCEEEHHHH--HTTCS-----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCcEEEchhh--cCCCH-----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 57999999985 22222 1389999999999999999999999999999999999999 9999999875 3679
Q ss_pred ccccCCC-----------CCCceeeeecccCCCccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 046776 84 GYMGKIS-----------AFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGI 152 (314)
Q Consensus 84 Gy~~~~~-----------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl 152 (314)
||.+.+. ..|++|.|.++.. +|.|| +|+||+.+++|+++|.+|+..||++|+++||+
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~----------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 143 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA----------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGT 143 (311)
T ss_dssp EEEEC-----------------CEEEEECSS----------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC----------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9987542 2489999998853 47899 89999999999999999999999999999999
Q ss_pred ----c-hhHHhhhcCcccceeeccccCCCCCC--C--CcccccccCCCCceEEecC-CCCC---cceecCCCceEEcCCC
Q 046776 153 ----E-KLYESQKESTTYLLRFLKYRKSQTDT--T--NLAFKGHTDKSLVSILHSN-HVKG---LELRTKDGEWIHFEPS 219 (314)
Q Consensus 153 ----~-~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~~~~~HtD~g~lTlL~qd-~~~G---LqV~~~~g~W~~V~p~ 219 (314)
+ ++|.+. .+.+|++|||||+.++ . .+|+++|||+|+||||+|| +++| |||++ +|+|++|+|+
T Consensus 144 ~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g~W~~V~p~ 218 (311)
T 1dcs_A 144 EPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GGAFTDLPYR 218 (311)
T ss_dssp CCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TTEEEECCCC
T ss_pred CCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CCEEEeCcCC
Confidence 8 777654 6789999999998753 3 6789999999999999999 8999 99987 8999999999
Q ss_pred CCcEEEEhhhHHHHHhCCcccCccceEecCC-----CCceEEEEeccCCCc--ceecCcccCCCCCCCCC--CCcCHHHH
Q 046776 220 PSSFVIIAGDVCMAWSNDRIKSCYHRVIVDG-----PEVRYALGLFSFLSG--VIQTPEELVDDEHPLQY--KPFDHAGL 290 (314)
Q Consensus 220 pg~~vVnvGD~l~~~TnG~~ks~~HRVv~~~-----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y--~~~t~~e~ 290 (314)
||++||||||+||+||||+||||+|||+.++ ..+|||++||++|+. +|. +++|+++++|++| +++|++||
T Consensus 219 pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey 297 (311)
T 1dcs_A 219 PDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDW 297 (311)
T ss_dssp TTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHH
T ss_pred CCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHH
Confidence 9999999999999999999999999999987 678999999999998 899 9999999999999 99999999
Q ss_pred HHHHhhcccC
Q 046776 291 LQFYLSNSDQ 300 (314)
Q Consensus 291 ~~~~~~~~~~ 300 (314)
+..++++...
T Consensus 298 ~~~~~~~~~~ 307 (311)
T 1dcs_A 298 IGGNYVNIRR 307 (311)
T ss_dssp HCSSCCCEEC
T ss_pred HHHHHHHHhc
Confidence 9988886554
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.3e-69 Score=488.07 Aligned_cols=253 Identities=20% Similarity=0.255 Sum_probs=220.6
Q ss_pred CCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCC-CCCCcc
Q 046776 7 QKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNP-KPAHGY 85 (314)
Q Consensus 7 ~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy 85 (314)
.+||||||+.. ..+++|.+||++||||||+|||||.++++++++++++||++ |+|+++... ..++||
T Consensus 2 ~~IPvIDls~~----------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA----------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGF 69 (280)
T ss_dssp --CCEEETTST----------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEE
T ss_pred CCCCEEECCCh----------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCcc
Confidence 36999999873 25789999999999999999999999999999999999998 789998654 467999
Q ss_pred ccCC-C-------CCCceeeeecccCCCccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--hh
Q 046776 86 MGKI-S-------AFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE--KL 155 (314)
Q Consensus 86 ~~~~-~-------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~--~~ 155 (314)
.+.+ . ..|++|.|.+. .||..+|+||+.+++|+++|.+|+.+||++|+++||++ +.
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~--------------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~ 135 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY--------------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAK 135 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC--------------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTT
T ss_pred ccCccccccCCCCcccHHHHHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhh
Confidence 8764 1 24788887663 37777899999999999999999999999999999976 22
Q ss_pred ----HHhhhcCcc-cceeeccccCCCCCC--CCcccccccCCCCceEEecCCCCCcceecCCCceEEcCCCCCcEEEEhh
Q 046776 156 ----YESQKESTT-YLLRFLKYRKSQTDT--TNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAG 228 (314)
Q Consensus 156 ----~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVnvG 228 (314)
|.+.+.++. +.+|++|||||+.++ ..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++|||+|
T Consensus 136 ~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiG 215 (280)
T 3on7_A 136 FSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIG 215 (280)
T ss_dssp CSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEEC
T ss_pred hhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcC
Confidence 455555544 889999999998654 5789999999999999999999999999899999999999999999999
Q ss_pred hHHHHHhCCcccCccceEecCC----CCceEEEEeccCCCc--ceecCcccCCCCCCCCCCCcCHHHHHHHHhhccc
Q 046776 229 DVCMAWSNDRIKSCYHRVIVDG----PEVRYALGLFSFLSG--VIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSD 299 (314)
Q Consensus 229 D~l~~~TnG~~ks~~HRVv~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~ 299 (314)
|+||+||||+||||+|||++++ ..+|||++||++|+. +|.| ++|++||+++|+++.+
T Consensus 216 D~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~~ 278 (280)
T 3on7_A 216 DMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRELG 278 (280)
T ss_dssp HHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHTT
T ss_pred hHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHhc
Confidence 9999999999999999999874 468999999999998 6653 6999999999998764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.85 E-value=0.05 Score=47.38 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCc-hhHHhhhcCcccceeeccccCCCCCCCCcccccccCCC-----------CceEEe--cC----CCC
Q 046776 141 LVMKMLFESYGIE-KLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKS-----------LVSILH--SN----HVK 202 (314)
Q Consensus 141 ~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g-----------~lTlL~--qd----~~~ 202 (314)
.|.+.|...|+.. .++...+.....-+++++|.+.. -..+|.|.. .+|+++ .| ..|
T Consensus 74 ~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GG 147 (243)
T 3dkq_A 74 ALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGG 147 (243)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEEC
T ss_pred HHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCc
Confidence 3344444445544 22222222223358899997632 356777753 455554 33 124
Q ss_pred CcceecCCCceEEcCCCCCcEEEEhhhHHHHHhCCcccCccceEecCCCCceEEEEeccC
Q 046776 203 GLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSF 262 (314)
Q Consensus 203 GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~ 262 (314)
.|.+.+..+ =..|+|..|.+|+.-. .++|+|.......|+++..+++
T Consensus 148 etvf~~~~~-~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 148 ELVIQDTYG-QQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp CEEEEETTE-EEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred eEEEeeCCC-cEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 466644333 3679999999999743 3699997655568999999886
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=93.32 E-value=0.63 Score=40.37 Aligned_cols=186 Identities=17% Similarity=0.146 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCCCCCCccccCCCCCCceeeeecccCCCcc
Q 046776 28 TACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRG 107 (314)
Q Consensus 28 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~~~d~~E~~~~~~~~~~~ 107 (314)
...+.|.+++.+.|++++.|- ++++.++.+.+.++..-. + -.+.. +...... ....+.+.-+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~---~--g~~~~-----a~i~~~~-~~~~~~iR~d------ 75 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD---T--GKFTD-----GQLVSQK-SDSSKDIRGD------ 75 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH---T--TCSCS-----CCEEECC-SSSTTCEECC------
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh---c--CCccc-----ccccccc-cccccccccc------
Confidence 345678899999999887664 899999999988877421 0 00110 1100000 0000000000
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHhhhcCcccceeeccccCCCCCCCCcccccc
Q 046776 108 ECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGH 187 (314)
Q Consensus 108 ~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~H 187 (314)
...|-+......+.+..|.+.+.++... +...||+.. .. ...-+.+.+|++. .-...+|
T Consensus 76 ------~i~wl~~~~~~~~~~~~l~~~i~~l~~~----ln~~lGl~~-----i~-~~~e~~~~~Y~~~-----G~~y~~H 134 (247)
T 2hbt_A 76 ------KITWIEGKEPGCETIGLLMSSMDDLIRH----CNGKLGSYK-----IN-GRTKAMVACYPGN-----GTGYVRH 134 (247)
T ss_dssp ------EEEEECSCSTTCHHHHHHHHHHHHHHHH----TTTTSTTCC-----EE-EECCEEEEEECSS-----SCCEEEE
T ss_pred ------ceeeecccccchhHHHHHHHHHHHHHHH----HhhhcCccc-----cc-ccceEEEEEecCC-----CCccccc
Confidence 0012110000011223344444443322 222233210 00 1233678889751 1246677
Q ss_pred cCCC-----CceEEec--C------CCCCcceecCCC-ceEEcCCCCCcEEEEhhhHHHHHhCCcccCccceEecCCCCc
Q 046776 188 TDKS-----LVSILHS--N------HVKGLELRTKDG-EWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEV 253 (314)
Q Consensus 188 tD~g-----~lTlL~q--d------~~~GLqV~~~~g-~W~~V~p~pg~~vVnvGD~l~~~TnG~~ks~~HRVv~~~~~~ 253 (314)
.|.. .+|+++. + ..|-|.++..++ ....|.|..|.+|+.-.+ . -++|.|.. ....
T Consensus 135 ~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-------~---~~~H~V~p-~~~~ 203 (247)
T 2hbt_A 135 VDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-------R---RNPHEVQP-AYAT 203 (247)
T ss_dssp CSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-------T---TCCEEECC-BSSC
T ss_pred ccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-------C---Cceeeecc-CCCE
Confidence 7762 5777763 2 134467764432 578999999999988643 1 16999976 4579
Q ss_pred eEEEEeccCC
Q 046776 254 RYALGLFSFL 263 (314)
Q Consensus 254 R~Si~~F~~P 263 (314)
|+||+..++-
T Consensus 204 R~sit~W~~~ 213 (247)
T 2hbt_A 204 RYAITVWYFD 213 (247)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEcC
Confidence 9999886643
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.14 E-value=1.2 Score=37.72 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=34.0
Q ss_pred CceEEcCCCCCcEEEEhhhHHHHHhCCcccCccceEecCC-CCceEEEEeccCCCc
Q 046776 211 GEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDG-PEVRYALGLFSFLSG 265 (314)
Q Consensus 211 g~W~~V~p~pg~~vVnvGD~l~~~TnG~~ks~~HRVv~~~-~~~R~Si~~F~~P~~ 265 (314)
..+..|.|.+|.+||.-+. ..|.|.... +.+|+||+|.+.|..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3577899999999998764 489998764 468999999987753
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=83.75 E-value=2 Score=36.31 Aligned_cols=47 Identities=4% Similarity=0.014 Sum_probs=33.0
Q ss_pred eEEcCCCCCcEEEEhhhHHHHHhCCcc-cCccceEecCCCCceEEEEeccCC
Q 046776 213 WIHFEPSPSSFVIIAGDVCMAWSNDRI-KSCYHRVIVDGPEVRYALGLFSFL 263 (314)
Q Consensus 213 W~~V~p~pg~~vVnvGD~l~~~TnG~~-ks~~HRVv~~~~~~R~Si~~F~~P 263 (314)
-+.|.|..|.+|+.-- ...+|.. ..++|+|..-....|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4899999999888643 0123333 578999965544689999988754
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=82.36 E-value=3.4 Score=34.91 Aligned_cols=101 Identities=12% Similarity=0.085 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCc-hhHHhhhcCcccceeeccccCCCCCCCCcccccccCCC-----------CceEEec--CC-CCC-c
Q 046776 141 LVMKMLFESYGIE-KLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKS-----------LVSILHS--NH-VKG-L 204 (314)
Q Consensus 141 ~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g-----------~lTlL~q--d~-~~G-L 204 (314)
.|.+.++..+|++ .. .-.+++++|.+.. -..+|.|+. .+|+++- |. .|| +
T Consensus 94 ~i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPASH--------GEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGGG--------BCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceecc--------ccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 3444444556775 31 2357889997632 256777753 3677654 32 233 4
Q ss_pred ceecCCCceEEcCCCCCcEEEEhhhHHHHHhCCcc-cCccceEecCCCCceEEEEeccC
Q 046776 205 ELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRI-KSCYHRVIVDGPEVRYALGLFSF 262 (314)
Q Consensus 205 qV~~~~g~W~~V~p~pg~~vVnvGD~l~~~TnG~~-ks~~HRVv~~~~~~R~Si~~F~~ 262 (314)
.. ++. =+.|.|..|.+|+.-.- ..+|.. ..++|+|..-....|+++..+++
T Consensus 160 ~F--p~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 160 FF--PKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EE--TTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred Ee--cCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 33 322 27899999998876531 011211 46899996554468999988764
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=78.08 E-value=4.2 Score=34.87 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=52.0
Q ss_pred ceeeccccCCCCCCCCcccccccCCC--------CceEEecCCCCCcceecCC----------CceEEcCCCCCcEEEEh
Q 046776 166 LLRFLKYRKSQTDTTNLAFKGHTDKS--------LVSILHSNHVKGLELRTKD----------GEWIHFEPSPSSFVIIA 227 (314)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~HtD~g--------~lTlL~qd~~~GLqV~~~~----------g~W~~V~p~pg~~vVnv 227 (314)
.+-+|+|.+. .-++++|.|-. +.||-+.. ..=+.+..+. +..+.+.-.+|.++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4568999753 33789999852 22222221 1112222211 36889999999999999
Q ss_pred hhHHHHHhCCcccCccceEecCCCCceEEEEecc
Q 046776 228 GDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFS 261 (314)
Q Consensus 228 GD~l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~ 261 (314)
|++=..|..|.-+.. .....|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 998777754443321 1246899999865
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=75.63 E-value=2.6 Score=38.39 Aligned_cols=93 Identities=13% Similarity=0.232 Sum_probs=61.1
Q ss_pred ceeeccccCCCCCCCCcccccccCCC------CceEEecCCCCCcceecCCCceEEcCCCCCcEEEEhhhHHHHHhCCcc
Q 046776 166 LLRFLKYRKSQTDTTNLAFKGHTDKS------LVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRI 239 (314)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~HtD~g------~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~TnG~~ 239 (314)
.+-+|+|.+. . ++++|.|-. +.|+-+. ...-+.+..++|.++.+.-.+|.++|.-|++-..|..|.-
T Consensus 199 ~~lvN~Y~~G-----~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG-----Q-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT-----C-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC-----C-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4568889652 2 799999984 2233222 2233455455677999999999999999999988976665
Q ss_pred cCccceEec------------------CCCCceEEEEeccCCCc
Q 046776 240 KSCYHRVIV------------------DGPEVRYALGLFSFLSG 265 (314)
Q Consensus 240 ks~~HRVv~------------------~~~~~R~Si~~F~~P~~ 265 (314)
+-...-+-. .....|+|+.|=.-++.
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 543332210 01346999999875554
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=71.23 E-value=10 Score=31.57 Aligned_cols=81 Identities=14% Similarity=0.239 Sum_probs=50.2
Q ss_pred ceeeccccCCCCCCCCcccccccCCC--------CceEEecCCCCCcceec---------CCCceEEcCCCCCcEEEEhh
Q 046776 166 LLRFLKYRKSQTDTTNLAFKGHTDKS--------LVSILHSNHVKGLELRT---------KDGEWIHFEPSPSSFVIIAG 228 (314)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~HtD~g--------~lTlL~qd~~~GLqV~~---------~~g~W~~V~p~pg~~vVnvG 228 (314)
.+-+|+|.+. .-++++|.|-. +.++-+. ...-+.+.. +.+..+.+.-.+|.++|.-|
T Consensus 101 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCC-----CCcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 3458999763 33789999862 1122222 111222221 12357889999999999999
Q ss_pred hHHHHHhCCcccCccceEecCC--CCceEEEEec
Q 046776 229 DVCMAWSNDRIKSCYHRVIVDG--PEVRYALGLF 260 (314)
Q Consensus 229 D~l~~~TnG~~ks~~HRVv~~~--~~~R~Si~~F 260 (314)
++=..|. |.|-... ...|+|+.|=
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 9877775 5554332 3689999984
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=63.40 E-value=9.4 Score=32.08 Aligned_cols=80 Identities=16% Similarity=0.226 Sum_probs=49.9
Q ss_pred ceeeccccCCCCCCCCcccccccCC-----C--CceEEecCCCCCcceec--CCCceEEcCCCCCcEEEEhhhHHHHHhC
Q 046776 166 LLRFLKYRKSQTDTTNLAFKGHTDK-----S--LVSILHSNHVKGLELRT--KDGEWIHFEPSPSSFVIIAGDVCMAWSN 236 (314)
Q Consensus 166 ~lr~~~Yp~~~~~~~~~~~~~HtD~-----g--~lTlL~qd~~~GLqV~~--~~g~W~~V~p~pg~~vVnvGD~l~~~Tn 236 (314)
.+-+|+|.+. . ++++|.|- + ++++-+. ...-+.+.. +++..+.+.-.+|.++|.-|++ +
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r---- 173 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-R---- 173 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-T----
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchH-H----
Confidence 3558889652 3 89999993 2 2233232 112233332 2356889999999999998885 1
Q ss_pred CcccCccceEecCCC-------CceEEEEecc
Q 046776 237 DRIKSCYHRVIVDGP-------EVRYALGLFS 261 (314)
Q Consensus 237 G~~ks~~HRVv~~~~-------~~R~Si~~F~ 261 (314)
+ -.|.|..... ..|+|+.|-.
T Consensus 174 --~--~~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 174 --L--FYHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --T--CCEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --c--eEeccCcccCCcCCCCCCCEEEEEeee
Confidence 1 2588765432 3599999854
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=56.34 E-value=5.6 Score=37.45 Aligned_cols=55 Identities=20% Similarity=0.221 Sum_probs=40.6
Q ss_pred CCCCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcC
Q 046776 5 AAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFD 67 (314)
Q Consensus 5 ~~~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 67 (314)
...-||+||++++ ..+ .+.++..+.+++.|++.|.|. ||.+...+..+...+|.+
T Consensus 97 G~~~iP~i~f~di--~~~-----~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADI--KAG-----HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHH--HHT-----CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHh--cCC-----CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 3567999999875 211 123456677899999999986 899888888777777754
No 17
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=46.09 E-value=23 Score=19.92 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhhccEEEE
Q 046776 28 TACNEIRLALEEYGCFVA 45 (314)
Q Consensus 28 ~~~~~l~~A~~~~Gff~l 45 (314)
.+++.|.-.|.+-|||+-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 688899999999999983
No 18
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=45.91 E-value=12 Score=31.10 Aligned_cols=36 Identities=11% Similarity=0.219 Sum_probs=28.5
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKH 50 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 50 (314)
.||++++... ++ .++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~----g~---~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP----GS---PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT----TC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 6899988653 23 357888999998888999999996
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=43.37 E-value=55 Score=29.16 Aligned_cols=41 Identities=17% Similarity=-0.015 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhccEEEEEcCCCC----hHHHHHHHHHHHHhcC
Q 046776 27 QTACNEIRLALEEYGCFVALYDKHL----PEFRNKVFDSLEELFD 67 (314)
Q Consensus 27 ~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 67 (314)
+++.+++.+.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3555667777788888777789875 6899999999999975
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=39.24 E-value=16 Score=30.39 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=28.2
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKH 50 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 50 (314)
.||++++... ++ .++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~----g~---~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF----GT---RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT----TC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 5888887653 23 257788999998888999999996
No 21
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=38.86 E-value=19 Score=33.07 Aligned_cols=52 Identities=17% Similarity=0.095 Sum_probs=38.5
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDL 68 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 68 (314)
++|.||++.+ +. + .+...++.+|+.++|++.+.|-.++.+. ..+.++.|-.+
T Consensus 122 ~~~~~~~~~~-l~-~----d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDV-LR-Y----DEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHH-HH-C----HHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHH-hc-C----HHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 6899999875 32 1 2567889999999999999998887543 34566666544
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=36.17 E-value=23 Score=29.95 Aligned_cols=37 Identities=14% Similarity=0.023 Sum_probs=28.8
Q ss_pred CCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCC
Q 046776 7 QKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKH 50 (314)
Q Consensus 7 ~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 50 (314)
..||++++... ++ .++++++.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKP----GS---VELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCST----TC---HHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 36889888652 33 357788899998888999999996
No 23
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=35.37 E-value=82 Score=30.78 Aligned_cols=101 Identities=12% Similarity=0.024 Sum_probs=58.8
Q ss_pred HHHHHHHHHcCCchhHHhhhcCcccceeeccccCCCCCCCCcccccccCC-C--CceEEec--C--------CCCCccee
Q 046776 141 LVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDK-S--LVSILHS--N--------HVKGLELR 207 (314)
Q Consensus 141 ~ll~~l~~~Lgl~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~-g--~lTlL~q--d--------~~~GLqV~ 207 (314)
.++..|++..|+++ + .+...-+.+.+|++.. ....|.|. + .+|+++- + ..|-|+++
T Consensus 105 ~Fr~~Ls~iTGi~~----L-sg~~~D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Ly 173 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK----L-SGSKTDMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLF 173 (633)
T ss_dssp HHHHHHHHHHTCCC----C-CSSCCCEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEEC
T ss_pred HHHHHHHHHhCCcc----c-CCCceeEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEe
Confidence 44456666666631 0 0011125567776532 47788884 2 3555542 2 23458887
Q ss_pred cCC-------CceEEcCCCCCcEEEEhhhHHHHHhC-CcccCccceEecC-CCCceEEEEeccC
Q 046776 208 TKD-------GEWIHFEPSPSSFVIIAGDVCMAWSN-DRIKSCYHRVIVD-GPEVRYALGLFSF 262 (314)
Q Consensus 208 ~~~-------g~W~~V~p~pg~~vVnvGD~l~~~Tn-G~~ks~~HRVv~~-~~~~R~Si~~F~~ 262 (314)
+.+ .....|.|..|.+|+..- . + .+.|.|... .+..|+||+-.++
T Consensus 174 d~d~~~~P~~d~~~~I~P~fNrLV~F~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 174 PSILPNVPHSDPSAKLVPQFNQIAFFKV-------LPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CEEETTEECSSCSEEECCCTTEEEEEEC-------CTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred cCCCcCCCCCCceEEEecCCCeEEEEEc-------CCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 543 237789999999998752 1 1 257877321 2788999986653
No 24
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=35.21 E-value=22 Score=29.27 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=34.1
Q ss_pred CCceE-ECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCC--h------HHHHHHHHHHHH
Q 046776 8 KLPIV-DLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHL--P------EFRNKVFDSLEE 64 (314)
Q Consensus 8 ~iPvI-Dls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~------~~~~~~~~~~~~ 64 (314)
.||++ ++... ++ .++++.+.+++.+.-.+.|.|||+= - +.+++++..+..
T Consensus 117 ~ip~~~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVS----AT---EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCS----SS---HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC----Cc---HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 68888 66542 23 3577888888888889999999852 1 455665554443
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=34.91 E-value=33 Score=29.59 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=34.8
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhc
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELF 66 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 66 (314)
+|+-||++.. + + .+..++|.+++.++|++.+.+-.++.+.. .+.++.|-
T Consensus 17 ei~gvdl~~~-l---~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 17 QISGADLTRP-L---S---DNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp EEESCCSSSC-C---C---HHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred EEECCCcCcc-C---C---HHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 4666777763 2 1 24578999999999999999988876543 34556654
No 26
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=29.83 E-value=24 Score=30.70 Aligned_cols=36 Identities=6% Similarity=0.054 Sum_probs=28.0
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKH 50 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 50 (314)
.||++++... ++ .++++++.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP----GT---DAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS----SS---HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC----CC---HHHHHHHHHHHccCCEEEEcCCCc
Confidence 5788877542 33 257888999999999999999996
No 27
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=29.65 E-value=46 Score=29.29 Aligned_cols=21 Identities=14% Similarity=-0.020 Sum_probs=18.4
Q ss_pred CccceEecCCCCceEEEEecc
Q 046776 241 SCYHRVIVDGPEVRYALGLFS 261 (314)
Q Consensus 241 s~~HRVv~~~~~~R~Si~~F~ 261 (314)
+..|.|.+.++.+|+.+.+=+
T Consensus 155 ~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 155 ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp TSCEEEEESSSSCCCEEEEEE
T ss_pred CCeeEEEcCCCCCeEEEEEEe
Confidence 358999999999999999866
No 28
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=28.80 E-value=26 Score=28.93 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=25.3
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhcc---EEEEEcCCC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYG---CFVALYDKH 50 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi 50 (314)
.||+++... + .+++++.+.+++.+.+ .+.|.|||+
T Consensus 139 ~vp~~~~~~-----g---~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNEQ-----N---IPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCCS-----C---HHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCCC-----C---HHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 567766531 2 2467888889998765 788999996
No 29
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=27.50 E-value=57 Score=28.36 Aligned_cols=37 Identities=11% Similarity=-0.120 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhccEEEEEcCC-CChHHHHHHHHHHHHhcC
Q 046776 28 TACNEIRLALEEYGCFVALYDK-HLPEFRNKVFDSLEELFD 67 (314)
Q Consensus 28 ~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 67 (314)
+..++|.+++.++|++.+.|-. ++. ++..+.++.|-.
T Consensus 40 ~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 40 ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4578999999999999999987 875 344556666644
No 30
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.41 E-value=54 Score=22.38 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=31.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-hhHHhh
Q 046776 121 NYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-KLYESQ 159 (314)
Q Consensus 121 ~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~ 159 (314)
..+-+..+++||..-.+-...-+..||+.+||+ +-....
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVW 52 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEW 52 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHH
Confidence 356688999999998888888899999999999 644433
No 31
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=24.42 E-value=44 Score=29.02 Aligned_cols=37 Identities=3% Similarity=-0.049 Sum_probs=27.9
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKH 50 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 50 (314)
.||++|+..+. .+ .+++++|.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~---~~---~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIA---LD---LSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSS---CC---HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCC---CC---HHHHHHHHHHhCcCCEEEEcCCce
Confidence 57888876531 12 356778888999999999999996
No 32
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=22.42 E-value=62 Score=27.94 Aligned_cols=50 Identities=18% Similarity=0.125 Sum_probs=36.0
Q ss_pred CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcC
Q 046776 8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFD 67 (314)
Q Consensus 8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 67 (314)
+|.=|||+.. ++ .+..++|.+|+.++|.+.+.|-.++.+. ..+.++.|=.
T Consensus 15 ei~gvdl~~~-l~------~~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~fG~ 64 (277)
T 3pvj_A 15 QISGVDISRD-IS------AEERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARFGD 64 (277)
T ss_dssp EEESCCTTSC-CC------HHHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGGSC
T ss_pred EEeCCCcccc-CC------HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 5666777763 21 2467889999999999999998887653 3456666643
No 33
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=22.06 E-value=2e+02 Score=23.01 Aligned_cols=39 Identities=8% Similarity=-0.081 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhhccEEEEEcC-CCChHHHHHHHHHHHH
Q 046776 26 WQTACNEIRLALEEYGCFVALYD-KHLPEFRNKVFDSLEE 64 (314)
Q Consensus 26 ~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 64 (314)
....+++|.+.+.+...++|.++ |++...+.++....++
T Consensus 8 K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 8 KELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 45688999999999999988865 8998878777776654
No 34
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=21.78 E-value=23 Score=25.47 Aligned_cols=26 Identities=35% Similarity=0.298 Sum_probs=17.9
Q ss_pred CCCcEEEEhhhHHHHHhCCcccCccceEec
Q 046776 219 SPSSFVIIAGDVCMAWSNDRIKSCYHRVIV 248 (314)
Q Consensus 219 ~pg~~vVnvGD~l~~~TnG~~ks~~HRVv~ 248 (314)
...-|.|.+- .-|||+|||++.-|+.
T Consensus 41 gesrftislr----ktsngrykstlklvvp 66 (131)
T 2vf9_A 41 GESRFTISLR----KTSNGRYKSTLKLVVP 66 (131)
T ss_dssp SCEEEEEEEE----ECTTSEEEEEEEEEEE
T ss_pred ccceEEEEEE----ecCCCceeeeEEEEEE
Confidence 3344555443 4689999999988864
No 35
>1wfx_A Probable RNA 2'-phosphotransferase; tRNA splicing, NAD, structural GE riken structural genomics/proteomics initiative, RSGI; 2.80A {Aeropyrum pernix} SCOP: d.166.1.5
Probab=21.13 E-value=19 Score=29.59 Aligned_cols=44 Identities=25% Similarity=0.346 Sum_probs=29.1
Q ss_pred CCCcceecCCCceEEcCCCCCcEEEEhhhHHHHHh-----CCcccCccceEecCCCCceEEEE
Q 046776 201 VKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWS-----NDRIKSCYHRVIVDGPEVRYALG 258 (314)
Q Consensus 201 ~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~T-----nG~~ks~~HRVv~~~~~~R~Si~ 258 (314)
.-||++ +.+| |++| -|+|+ +. .+.=...+++||...++.||++.
T Consensus 19 ~~gL~l-d~~G-~v~v-----------~~LL~-~~~~~~~~~~t~~~l~~vV~~~~K~Rf~l~ 67 (186)
T 1wfx_A 19 RYGVRL-TREG-WARV-----------SEVVE-GLRKAGWSWVEEWHIVGVALHDPKGRYELR 67 (186)
T ss_dssp GGTCCC-CTTC-CEEH-----------HHHHH-HHHHTTCTTCCHHHHHHHHHHCSSCCEEEE
T ss_pred hcCCcc-CCCC-CEEH-----------HHHHh-hhhhcccCCCCHHHHHHHHhcCCCCceEee
Confidence 458888 6666 8765 47777 32 11223347778877778899986
No 36
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=20.67 E-value=2e+02 Score=22.78 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhcc-EEEEEc-CCCChHHHHHHHHHHHH
Q 046776 26 WQTACNEIRLALEEYG-CFVALY-DKHLPEFRNKVFDSLEE 64 (314)
Q Consensus 26 ~~~~~~~l~~A~~~~G-ff~l~n-hgi~~~~~~~~~~~~~~ 64 (314)
....+++|.+.+.+.. .++|.+ +|++.+.+.++....++
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567889999999988 666665 58988777777766553
Done!