Query 046779
Match_columns 183
No_of_seqs 144 out of 1304
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 04:24:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046779.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046779hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05368 NmrA: NmrA-like famil 99.9 2.5E-23 5.5E-28 164.5 7.2 114 2-117 93-233 (233)
2 TIGR03649 ergot_EASG ergot alk 99.9 1.4E-20 3E-25 152.9 13.9 162 2-182 95-281 (285)
3 CHL00194 ycf39 Ycf39; Provisio 99.6 2.1E-14 4.7E-19 118.6 13.2 117 2-125 100-237 (317)
4 PLN02657 3,8-divinyl protochlo 99.2 3.5E-10 7.5E-15 96.4 11.2 116 2-124 172-311 (390)
5 PLN00016 RNA-binding protein; 99.0 2E-09 4.4E-14 91.0 9.2 90 31-121 188-303 (378)
6 COG0702 Predicted nucleoside-d 98.7 2E-07 4.4E-12 74.5 11.2 119 3-128 98-237 (275)
7 TIGR01214 rmlD dTDP-4-dehydror 98.2 1.3E-05 2.8E-10 64.8 8.9 87 27-114 123-233 (287)
8 PF13460 NAD_binding_10: NADH( 98.0 4.8E-06 1E-10 63.0 3.8 78 2-79 88-183 (183)
9 PLN00141 Tic62-NAD(P)-related 98.0 2.9E-05 6.2E-10 61.9 7.8 78 29-106 158-249 (251)
10 TIGR01746 Thioester-redct thio 97.8 0.00022 4.8E-09 59.0 9.8 98 28-129 165-296 (367)
11 PLN02695 GDP-D-mannose-3',5'-e 97.7 0.00049 1.1E-08 58.2 10.3 87 28-117 167-289 (370)
12 TIGR03466 HpnA hopanoid-associ 97.6 0.00036 7.7E-09 57.2 8.4 91 29-122 142-260 (328)
13 PRK07201 short chain dehydroge 97.6 0.00053 1.2E-08 61.9 10.2 93 28-121 151-282 (657)
14 TIGR01777 yfcH conserved hypot 97.5 0.00044 9.5E-09 55.7 8.0 84 39-125 150-256 (292)
15 KOG1203 Predicted dehydrogenas 97.5 0.00023 5E-09 60.9 6.5 77 29-107 221-316 (411)
16 PRK05865 hypothetical protein; 97.4 0.00071 1.5E-08 63.1 7.9 76 32-108 106-201 (854)
17 COG1087 GalE UDP-glucose 4-epi 97.3 0.0014 3.1E-08 53.8 8.6 116 2-118 108-280 (329)
18 TIGR01179 galE UDP-glucose-4-e 97.3 0.0015 3.3E-08 53.2 8.7 90 28-118 145-284 (328)
19 PLN02240 UDP-glucose 4-epimera 97.3 0.0037 8.1E-08 51.9 10.5 57 61-118 238-298 (352)
20 TIGR01181 dTDP_gluc_dehyt dTDP 97.2 0.0017 3.8E-08 52.7 8.3 83 28-112 150-263 (317)
21 PRK10217 dTDP-glucose 4,6-dehy 97.2 0.003 6.5E-08 52.7 9.8 83 28-112 160-273 (355)
22 PRK10675 UDP-galactose-4-epime 97.2 0.0033 7.2E-08 51.9 9.7 58 61-119 231-290 (338)
23 PLN02662 cinnamyl-alcohol dehy 97.2 0.0024 5.1E-08 52.4 8.4 80 29-111 163-270 (322)
24 PRK15181 Vi polysaccharide bio 97.1 0.0035 7.7E-08 52.4 8.8 109 2-111 131-284 (348)
25 PLN02427 UDP-apiose/xylose syn 97.1 0.0034 7.3E-08 53.2 8.5 84 28-111 182-308 (386)
26 PLN02572 UDP-sulfoquinovose sy 97.1 0.0049 1.1E-07 53.5 9.6 89 27-117 227-368 (442)
27 PLN02986 cinnamyl-alcohol dehy 97.0 0.0025 5.5E-08 52.4 7.4 79 29-110 164-270 (322)
28 PLN02583 cinnamoyl-CoA reducta 96.9 0.0053 1.2E-07 50.2 8.0 79 30-111 165-265 (297)
29 PRK11908 NAD-dependent epimera 96.9 0.012 2.6E-07 49.0 10.0 85 28-112 149-274 (347)
30 PF04321 RmlD_sub_bind: RmlD s 96.8 0.003 6.5E-08 51.6 6.2 93 29-122 126-245 (286)
31 KOG2865 NADH:ubiquinone oxidor 96.8 0.0048 1E-07 50.6 7.0 112 2-120 167-304 (391)
32 PRK10084 dTDP-glucose 4,6 dehy 96.8 0.011 2.3E-07 49.3 9.3 84 27-112 166-280 (352)
33 PLN02686 cinnamoyl-CoA reducta 96.8 0.0068 1.5E-07 51.3 7.9 86 29-116 217-330 (367)
34 TIGR02197 heptose_epim ADP-L-g 96.6 0.02 4.3E-07 46.6 9.6 86 28-116 138-266 (314)
35 PLN02989 cinnamyl-alcohol dehy 96.6 0.011 2.3E-07 48.7 7.9 81 28-111 164-272 (325)
36 PLN03209 translocon at the inn 96.5 0.01 2.3E-07 53.1 7.7 80 28-108 227-323 (576)
37 COG1091 RfbD dTDP-4-dehydrorha 96.5 0.021 4.5E-07 46.7 8.5 86 29-116 125-233 (281)
38 PLN02166 dTDP-glucose 4,6-dehy 96.5 0.025 5.4E-07 49.1 9.5 86 29-117 264-382 (436)
39 PLN02260 probable rhamnose bio 96.4 0.014 3E-07 53.2 8.0 84 27-112 158-272 (668)
40 COG0451 WcaG Nucleoside-diphos 96.4 0.017 3.7E-07 46.8 7.8 84 28-114 142-261 (314)
41 PLN02214 cinnamoyl-CoA reducta 96.4 0.022 4.8E-07 47.6 8.4 80 29-111 162-270 (342)
42 PLN02206 UDP-glucuronate decar 96.4 0.036 7.8E-07 48.2 10.0 86 29-117 263-381 (442)
43 PLN02650 dihydroflavonol-4-red 96.2 0.028 6.1E-07 46.9 8.1 80 28-110 163-272 (351)
44 PLN02725 GDP-4-keto-6-deoxyman 96.1 0.079 1.7E-06 42.9 10.1 85 30-116 132-256 (306)
45 PRK11150 rfaD ADP-L-glycero-D- 95.9 0.04 8.8E-07 44.9 7.7 81 28-111 140-256 (308)
46 KOG3019 Predicted nucleoside-d 95.6 0.071 1.5E-06 42.5 7.6 107 2-112 129-261 (315)
47 PRK08125 bifunctional UDP-gluc 95.6 0.065 1.4E-06 48.9 8.2 85 28-112 463-588 (660)
48 PLN02778 3,5-epimerase/4-reduc 94.9 0.41 8.9E-06 39.2 10.4 89 29-121 142-249 (298)
49 PRK09987 dTDP-4-dehydrorhamnos 94.8 0.29 6.2E-06 40.0 9.3 82 27-110 127-235 (299)
50 TIGR03589 PseB UDP-N-acetylglu 94.8 0.19 4.1E-06 41.6 8.2 81 27-110 134-245 (324)
51 COG2910 Putative NADH-flavin r 94.7 0.13 2.8E-06 39.7 6.3 61 30-90 132-210 (211)
52 KOG4288 Predicted oxidoreducta 94.6 0.14 3E-06 40.9 6.5 90 2-107 152-280 (283)
53 PLN00198 anthocyanidin reducta 94.5 0.24 5.3E-06 40.9 8.2 81 28-111 168-285 (338)
54 COG1090 Predicted nucleoside-d 94.1 0.2 4.4E-06 40.9 6.6 95 30-127 139-256 (297)
55 PRK07825 short chain dehydroge 94.0 0.16 3.5E-06 40.5 6.0 92 37-128 166-267 (273)
56 TIGR02622 CDP_4_6_dhtase CDP-g 94.0 0.32 6.9E-06 40.5 7.9 83 28-110 152-277 (349)
57 PLN02896 cinnamyl-alcohol dehy 93.6 0.42 9.2E-06 39.8 8.0 80 29-111 177-293 (353)
58 PRK05875 short chain dehydroge 93.5 0.36 7.8E-06 38.5 7.2 82 28-110 159-271 (276)
59 KOG1431 GDP-L-fucose synthetas 93.4 0.2 4.3E-06 40.1 5.2 80 36-115 148-263 (315)
60 KOG1502 Flavonol reductase/cin 93.4 0.36 7.9E-06 40.3 7.1 71 37-110 177-272 (327)
61 PF01073 3Beta_HSD: 3-beta hyd 93.3 0.59 1.3E-05 38.1 8.2 91 28-119 146-279 (280)
62 PF01370 Epimerase: NAD depend 93.0 0.13 2.9E-06 39.7 3.9 63 27-89 139-235 (236)
63 TIGR01472 gmd GDP-mannose 4,6- 92.9 0.21 4.5E-06 41.5 5.0 51 61-114 224-274 (343)
64 PRK08263 short chain dehydroge 92.4 0.26 5.6E-06 39.5 4.9 79 29-108 150-261 (275)
65 COG1088 RfbB dTDP-D-glucose 4, 91.9 1.2 2.6E-05 36.9 8.1 89 24-114 148-267 (340)
66 PLN02653 GDP-mannose 4,6-dehyd 91.4 0.42 9E-06 39.6 5.1 49 61-112 230-278 (340)
67 PLN02996 fatty acyl-CoA reduct 91.3 0.95 2.1E-05 40.0 7.5 83 28-111 236-359 (491)
68 PRK12320 hypothetical protein; 90.2 0.96 2.1E-05 41.8 6.7 72 34-108 112-202 (699)
69 PRK06482 short chain dehydroge 90.2 1.6 3.4E-05 34.8 7.4 81 28-110 148-263 (276)
70 PRK12828 short chain dehydroge 89.9 0.79 1.7E-05 35.3 5.3 51 41-91 174-234 (239)
71 PRK09291 short chain dehydroge 89.7 0.4 8.8E-06 37.6 3.5 91 29-129 146-247 (257)
72 TIGR03443 alpha_am_amid L-amin 89.4 3.7 8E-05 40.6 10.5 97 28-128 1150-1279(1389)
73 PRK07326 short chain dehydroge 89.1 2.3 5.1E-05 32.8 7.4 51 40-90 172-230 (237)
74 PRK07074 short chain dehydroge 88.8 1.4 3E-05 34.7 6.0 78 29-107 149-254 (257)
75 PRK12825 fabG 3-ketoacyl-(acyl 88.1 1.2 2.6E-05 34.4 5.2 53 39-91 174-244 (249)
76 PLN02260 probable rhamnose bio 86.8 5.1 0.00011 36.6 9.1 92 29-124 513-623 (668)
77 KOG0747 Putative NAD+-dependen 86.1 4.6 9.9E-05 33.4 7.5 87 23-111 152-269 (331)
78 PRK07806 short chain dehydroge 84.9 3.1 6.8E-05 32.4 6.0 64 28-91 153-241 (248)
79 PRK12826 3-ketoacyl-(acyl-carr 82.9 2.6 5.7E-05 32.6 4.8 62 29-90 157-244 (251)
80 PRK05786 fabG 3-ketoacyl-(acyl 81.9 3.1 6.6E-05 32.1 4.9 62 29-90 151-232 (238)
81 PRK06180 short chain dehydroge 80.0 5.6 0.00012 31.7 5.9 54 28-81 150-239 (277)
82 PRK08063 enoyl-(acyl carrier p 79.9 5.9 0.00013 30.8 5.9 64 28-91 154-244 (250)
83 TIGR01963 PHB_DH 3-hydroxybuty 79.7 6.3 0.00014 30.6 6.0 62 29-90 151-249 (255)
84 PRK05653 fabG 3-ketoacyl-(acyl 77.0 5.1 0.00011 30.8 4.7 53 39-91 172-242 (246)
85 PRK07060 short chain dehydroge 76.7 10 0.00022 29.3 6.3 63 28-90 150-239 (245)
86 PRK08219 short chain dehydroge 75.7 12 0.00027 28.3 6.5 53 29-81 143-213 (227)
87 KOG2774 NAD dependent epimeras 75.5 23 0.0005 28.7 7.9 55 61-117 251-308 (366)
88 PRK07666 fabG 3-ketoacyl-(acyl 75.0 4.8 0.0001 31.1 4.1 42 40-81 175-225 (239)
89 PF07485 DUF1529: Domain of Un 73.7 6 0.00013 28.4 3.9 49 30-78 68-121 (123)
90 PRK12429 3-hydroxybutyrate deh 73.6 11 0.00024 29.3 5.8 49 42-90 174-252 (258)
91 PRK08017 oxidoreductase; Provi 73.3 14 0.00031 28.7 6.4 54 28-81 146-224 (256)
92 PRK13394 3-hydroxybutyrate deh 73.1 18 0.0004 28.1 7.0 62 29-90 158-256 (262)
93 PRK12829 short chain dehydroge 72.1 14 0.0003 28.8 6.1 64 29-92 161-260 (264)
94 PRK05650 short chain dehydroge 71.6 5.6 0.00012 31.5 3.8 39 42-80 170-226 (270)
95 KOG1429 dTDP-glucose 4-6-dehyd 71.3 26 0.00057 29.2 7.4 84 29-115 171-287 (350)
96 PRK06914 short chain dehydroge 71.1 14 0.00029 29.4 5.9 30 28-57 153-189 (280)
97 PRK09186 flagellin modificatio 68.1 7.9 0.00017 30.2 3.9 62 29-90 169-251 (256)
98 PRK06077 fabG 3-ketoacyl-(acyl 67.6 16 0.00035 28.3 5.5 64 28-91 154-243 (252)
99 PRK09134 short chain dehydroge 67.5 20 0.00043 28.1 6.1 71 28-99 159-249 (258)
100 KOG1371 UDP-glucose 4-epimeras 67.5 11 0.00023 31.8 4.5 58 61-118 234-292 (343)
101 PRK06179 short chain dehydroge 67.2 30 0.00064 27.2 7.1 30 29-58 146-182 (270)
102 PRK08628 short chain dehydroge 66.4 9 0.0002 30.0 3.9 71 29-101 154-256 (258)
103 PLN02503 fatty acyl-CoA reduct 65.6 36 0.00079 31.1 7.9 80 29-109 351-472 (605)
104 TIGR02990 ectoine_eutA ectoine 65.4 39 0.00085 27.0 7.3 65 61-132 162-226 (239)
105 PRK07904 short chain dehydroge 65.3 10 0.00023 29.9 4.1 45 37-81 175-224 (253)
106 COG4588 AcfC Accessory coloniz 63.6 22 0.00049 28.0 5.4 53 77-129 13-66 (252)
107 PRK10538 malonic semialdehyde 62.7 34 0.00073 26.6 6.6 54 29-82 148-225 (248)
108 COG4221 Short-chain alcohol de 62.6 14 0.00031 29.7 4.3 61 30-90 155-240 (246)
109 PRK07577 short chain dehydroge 61.9 25 0.00054 26.9 5.6 63 28-90 139-229 (234)
110 PRK05557 fabG 3-ketoacyl-(acyl 61.3 21 0.00045 27.3 5.1 62 29-90 156-242 (248)
111 PRK07231 fabG 3-ketoacyl-(acyl 61.1 20 0.00044 27.6 5.0 62 29-90 155-245 (251)
112 PRK09135 pteridine reductase; 60.8 40 0.00087 25.8 6.7 64 28-91 156-243 (249)
113 PRK07775 short chain dehydroge 60.4 17 0.00036 29.0 4.5 54 28-81 159-241 (274)
114 PRK07454 short chain dehydroge 60.2 16 0.00034 28.3 4.2 53 29-81 156-225 (241)
115 PRK08642 fabG 3-ketoacyl-(acyl 59.6 51 0.0011 25.4 7.1 63 28-90 159-247 (253)
116 PRK07523 gluconate 5-dehydroge 58.7 42 0.00092 26.1 6.5 64 28-91 159-249 (255)
117 PRK05565 fabG 3-ketoacyl-(acyl 58.5 27 0.00059 26.8 5.3 52 39-90 173-242 (247)
118 PRK07067 sorbitol dehydrogenas 57.2 35 0.00077 26.6 5.8 63 29-91 154-252 (257)
119 PRK07041 short chain dehydroge 55.2 59 0.0013 24.7 6.7 64 28-91 137-225 (230)
120 PRK12744 short chain dehydroge 54.1 39 0.00084 26.4 5.6 62 29-90 160-251 (257)
121 PRK12939 short chain dehydroge 51.9 32 0.00069 26.5 4.7 63 29-91 157-245 (250)
122 TIGR03206 benzo_BadH 2-hydroxy 51.5 63 0.0014 24.8 6.4 49 42-90 173-245 (250)
123 CHL00160 rpl9 ribosomal protei 51.2 17 0.00038 27.0 2.9 28 95-122 98-125 (153)
124 PRK07774 short chain dehydroge 49.8 52 0.0011 25.3 5.7 63 29-91 156-244 (250)
125 PRK06182 short chain dehydroge 49.4 32 0.0007 27.1 4.5 29 29-57 147-182 (273)
126 PRK06841 short chain dehydroge 46.0 51 0.0011 25.5 5.1 62 29-90 162-249 (255)
127 PRK12746 short chain dehydroge 45.3 57 0.0012 25.2 5.2 62 29-90 161-249 (254)
128 PRK06924 short chain dehydroge 45.2 83 0.0018 24.2 6.2 54 28-81 154-238 (251)
129 PRK12935 acetoacetyl-CoA reduc 45.1 1.3E+02 0.0029 23.0 7.3 63 28-90 156-242 (247)
130 PRK12936 3-ketoacyl-(acyl-carr 44.9 52 0.0011 25.2 4.9 50 41-90 172-239 (245)
131 PRK12827 short chain dehydroge 43.4 57 0.0012 24.9 5.0 63 28-90 160-245 (249)
132 PRK12937 short chain dehydroge 43.4 84 0.0018 24.0 5.9 63 28-90 153-241 (245)
133 TIGR01830 3oxo_ACP_reduc 3-oxo 42.9 70 0.0015 24.3 5.4 50 41-90 168-235 (239)
134 TIGR01829 AcAcCoA_reduct aceto 42.9 52 0.0011 25.1 4.7 50 41-90 170-237 (242)
135 TIGR01832 kduD 2-deoxy-D-gluco 42.8 77 0.0017 24.4 5.6 62 29-90 154-242 (248)
136 PRK05876 short chain dehydroge 42.8 97 0.0021 24.7 6.3 62 41-109 176-262 (275)
137 PRK12824 acetoacetyl-CoA reduc 42.3 63 0.0014 24.7 5.0 61 30-90 154-239 (245)
138 PRK06138 short chain dehydroge 41.5 81 0.0018 24.2 5.6 63 28-90 153-246 (252)
139 PRK06947 glucose-1-dehydrogena 40.2 74 0.0016 24.5 5.2 63 28-90 157-245 (248)
140 PF13055 DUF3917: Protein of u 39.1 11 0.00025 23.2 0.3 8 2-9 6-13 (71)
141 PRK06181 short chain dehydroge 38.9 53 0.0012 25.6 4.2 51 29-79 151-225 (263)
142 TIGR02685 pter_reduc_Leis pter 38.5 1.2E+02 0.0025 23.9 6.1 64 28-91 173-260 (267)
143 PF13592 HTH_33: Winged helix- 38.0 93 0.002 18.8 4.4 35 93-132 2-36 (60)
144 PRK13761 hypothetical protein; 36.5 1.3E+02 0.0029 24.1 5.8 93 29-125 12-111 (248)
145 PRK08085 gluconate 5-dehydroge 35.1 1.1E+02 0.0025 23.6 5.5 62 29-90 159-247 (254)
146 PRK12745 3-ketoacyl-(acyl-carr 34.9 1.4E+02 0.003 23.0 6.0 62 29-90 161-248 (256)
147 PRK08220 2,3-dihydroxybenzoate 34.9 1E+02 0.0022 23.7 5.2 62 29-90 149-245 (252)
148 PRK08217 fabG 3-ketoacyl-(acyl 34.4 1.4E+02 0.0031 22.7 6.0 62 29-90 164-248 (253)
149 PRK12613 galactose-6-phosphate 34.4 1.9E+02 0.004 21.2 6.5 74 28-117 11-84 (141)
150 PF06543 Lac_bphage_repr: Lact 34.3 48 0.001 19.6 2.3 39 68-113 8-47 (49)
151 PRK06523 short chain dehydroge 34.1 1.4E+02 0.003 23.1 5.9 63 29-91 153-254 (260)
152 KOG4039 Serine/threonine kinas 33.1 38 0.00083 26.3 2.3 48 2-55 121-170 (238)
153 PRK09730 putative NAD(P)-bindi 32.9 91 0.002 23.8 4.6 62 29-90 157-244 (247)
154 PRK06123 short chain dehydroge 32.7 1.3E+02 0.0028 23.1 5.4 63 28-90 157-245 (248)
155 PRK06128 oxidoreductase; Provi 32.6 1.4E+02 0.003 24.1 5.7 63 29-91 206-295 (300)
156 PRK08265 short chain dehydroge 32.0 1.4E+02 0.003 23.4 5.6 62 29-90 151-241 (261)
157 PRK09242 tropinone reductase; 32.0 2.1E+02 0.0047 22.0 6.6 62 29-90 161-249 (257)
158 PRK14834 undecaprenyl pyrophos 31.8 1.5E+02 0.0033 23.9 5.7 65 67-133 115-184 (249)
159 PRK07109 short chain dehydroge 31.6 1.3E+02 0.0029 24.8 5.6 59 29-90 158-238 (334)
160 PRK08278 short chain dehydroge 31.5 1.9E+02 0.0042 22.8 6.4 54 28-81 164-234 (273)
161 PRK12938 acetyacetyl-CoA reduc 31.2 1.2E+02 0.0026 23.3 5.0 62 29-90 154-240 (246)
162 PRK14831 undecaprenyl pyrophos 30.4 1.8E+02 0.0039 23.5 5.9 64 68-133 122-190 (249)
163 PRK14840 undecaprenyl pyrophos 30.4 1.7E+02 0.0038 23.6 5.8 64 68-133 124-192 (250)
164 PRK12742 oxidoreductase; Provi 30.1 1.6E+02 0.0035 22.3 5.6 62 29-90 147-232 (237)
165 TIGR01256 modA molybdenum ABC 29.8 1.1E+02 0.0023 23.2 4.5 35 95-129 5-39 (216)
166 TIGR03853 matur_matur probable 29.6 1.7E+02 0.0036 19.2 5.0 38 93-130 15-57 (77)
167 COG2879 Uncharacterized small 29.5 37 0.0008 21.3 1.4 19 163-181 32-50 (65)
168 PRK07102 short chain dehydroge 29.3 97 0.0021 23.8 4.2 51 30-80 150-213 (243)
169 PRK06196 oxidoreductase; Provi 29.2 1.8E+02 0.0039 23.5 5.9 53 29-81 182-262 (315)
170 PRK07035 short chain dehydroge 28.8 2.6E+02 0.0057 21.4 6.6 62 29-90 159-247 (252)
171 PRK12748 3-ketoacyl-(acyl-carr 28.5 1.8E+02 0.0038 22.6 5.6 63 28-90 167-251 (256)
172 PRK05993 short chain dehydroge 28.2 2.7E+02 0.0059 21.9 6.7 28 29-56 149-183 (277)
173 PRK14829 undecaprenyl pyrophos 27.6 1.9E+02 0.0041 23.2 5.6 64 68-133 116-184 (243)
174 TIGR03227 PhnS 2-aminoethylpho 27.4 3.7E+02 0.008 22.5 7.7 31 98-128 54-84 (367)
175 PRK06949 short chain dehydroge 27.3 2.9E+02 0.0062 21.2 6.8 61 30-90 168-254 (258)
176 PF11491 DUF3213: Protein of u 27.3 43 0.00092 22.3 1.5 49 75-125 28-76 (88)
177 PRK05867 short chain dehydroge 27.1 1.9E+02 0.0042 22.3 5.6 62 29-90 162-247 (253)
178 PRK07578 short chain dehydroge 26.9 2.6E+02 0.0057 20.6 6.2 52 29-80 126-190 (199)
179 cd00475 CIS_IPPS Cis (Z)-Isopr 26.4 1.9E+02 0.0042 22.8 5.4 64 68-133 102-170 (221)
180 PRK06935 2-deoxy-D-gluconate 3 26.1 2E+02 0.0043 22.3 5.5 62 29-90 164-252 (258)
181 COG4650 RtcR Sigma54-dependent 26.1 63 0.0014 27.2 2.6 45 5-54 309-362 (531)
182 COG5394 Uncharacterized protei 25.7 64 0.0014 24.4 2.3 40 82-123 15-55 (193)
183 PF05402 PqqD: Coenzyme PQQ sy 25.1 44 0.00096 20.5 1.3 36 95-130 29-64 (68)
184 PRK12859 3-ketoacyl-(acyl-carr 24.9 1.7E+02 0.0037 22.8 4.9 61 30-90 170-252 (256)
185 PRK08324 short chain dehydroge 24.5 3.5E+02 0.0077 24.9 7.5 64 28-91 571-673 (681)
186 PRK14832 undecaprenyl pyrophos 24.3 2.2E+02 0.0048 23.0 5.4 65 67-133 119-188 (253)
187 PRK08213 gluconate 5-dehydroge 24.2 2.8E+02 0.006 21.4 6.0 63 28-90 166-253 (259)
188 PRK04168 molybdate ABC transpo 24.2 1.2E+02 0.0025 25.5 3.9 42 93-134 41-83 (334)
189 TIGR03730 tungstate_WtpA tungs 24.1 1.2E+02 0.0027 24.6 4.0 42 93-134 10-52 (273)
190 COG0300 DltE Short-chain dehyd 24.1 86 0.0019 25.6 3.0 47 33-79 168-226 (265)
191 PF13416 SBP_bac_8: Bacterial 23.6 1.2E+02 0.0027 23.6 3.9 29 100-128 1-29 (281)
192 PRK13551 agmatine deiminase; P 23.4 2.4E+02 0.0053 24.0 5.7 80 31-121 181-268 (362)
193 PRK07984 enoyl-(acyl carrier p 23.1 3.1E+02 0.0068 21.6 6.2 73 29-101 160-259 (262)
194 PRK06124 gluconate 5-dehydroge 23.0 2.4E+02 0.0051 21.7 5.4 62 29-90 161-249 (256)
195 PRK12743 oxidoreductase; Provi 22.9 3.6E+02 0.0078 20.8 7.1 62 29-90 154-240 (256)
196 PRK12747 short chain dehydroge 22.8 3.3E+02 0.0072 20.8 6.2 63 28-90 158-247 (252)
197 TIGR01848 PHA_reg_PhaR polyhyd 22.8 1.2E+02 0.0026 21.2 3.1 40 82-123 6-46 (107)
198 PRK08267 short chain dehydroge 22.7 2.7E+02 0.0059 21.5 5.7 51 29-79 150-221 (260)
199 PF07879 PHB_acc_N: PHB/PHA ac 22.2 1.1E+02 0.0023 19.4 2.5 42 82-125 6-48 (64)
200 PRK12384 sorbitol-6-phosphate 22.0 2.6E+02 0.0057 21.5 5.5 62 29-90 155-253 (259)
201 PRK07832 short chain dehydroge 21.8 1.5E+02 0.0033 23.2 4.1 16 41-56 171-186 (272)
202 PF13531 SBP_bac_11: Bacterial 21.7 1.6E+02 0.0035 22.4 4.1 37 95-131 10-46 (230)
203 PRK06101 short chain dehydroge 21.6 1.7E+02 0.0036 22.5 4.2 51 29-79 142-205 (240)
204 PRK12481 2-deoxy-D-gluconate 3 21.6 3.1E+02 0.0067 21.2 5.8 62 29-90 157-245 (251)
205 PRK07024 short chain dehydroge 21.5 1.6E+02 0.0035 22.8 4.2 51 29-79 152-215 (257)
206 PRK06550 fabG 3-ketoacyl-(acyl 21.0 2.1E+02 0.0046 21.6 4.7 61 30-90 142-229 (235)
207 PRK05529 cell division protein 20.9 3E+02 0.0064 22.1 5.6 51 77-130 56-106 (255)
208 cd03735 SOCS_SOCS1 SOCS (suppr 20.8 42 0.00092 19.4 0.5 11 172-182 29-39 (43)
209 PRK06114 short chain dehydroge 20.5 2.5E+02 0.0054 21.7 5.0 62 29-90 161-248 (254)
210 PRK14830 undecaprenyl pyrophos 20.4 3E+02 0.0066 22.2 5.5 65 67-133 123-192 (251)
211 PRK06463 fabG 3-ketoacyl-(acyl 20.4 3.1E+02 0.0067 21.1 5.6 62 29-90 153-244 (255)
212 COG0725 ModA ABC-type molybdat 20.3 2E+02 0.0043 23.2 4.4 38 93-130 39-76 (258)
213 PF13950 Epimerase_Csub: UDP-g 20.3 75 0.0016 19.6 1.6 16 104-119 1-16 (62)
214 PF09373 PMBR: Pseudomurein-bi 20.3 1.2E+02 0.0026 16.1 2.2 17 93-109 2-18 (33)
215 PF09585 Lin0512_fam: Conserve 20.2 94 0.002 22.0 2.2 36 5-45 1-36 (113)
216 COG3320 Putative dehydrogenase 20.1 1.2E+02 0.0025 26.2 3.1 27 29-55 169-198 (382)
No 1
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.89 E-value=2.5e-23 Score=164.52 Aligned_cols=114 Identities=25% Similarity=0.433 Sum_probs=96.0
Q ss_pred CCceEeccCCCCCCCCcchhhhhchhhHHHHHHHHHHHHHCCCCeEEEecchHHHhhhc---------------------
Q 046779 2 FISQRFFPSEFGNDVDRVHAVELARTSFATKAKIRRAVEAERIPYTYVASNFFAGLYLS--------------------- 60 (183)
Q Consensus 2 ~~VkrFiPSefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~~--------------------- 60 (183)
.||||||||+|+.+........|..++++.|..++++|++++++||+|+||+||||++.
T Consensus 93 agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (233)
T PF05368_consen 93 AGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPG 172 (233)
T ss_dssp HT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTS
T ss_pred cccceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCC
Confidence 47999999999998754322224556789999999999999999999999999999864
Q ss_pred ---ccc-cChhHHHHHHHHhhcCCccC--CeEEEEecCCCccCHHHHHHHHHHHhCCceeEEe
Q 046779 61 ---IIF-NKEDDIGINSIKAVDDPRTL--NKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVY 117 (183)
Q Consensus 61 ---~~~-t~~~Dia~~va~~l~~p~~~--~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~ 117 (183)
..+ ++.+|||+++|++|.+|+.. |+.+.+. ++.+|++|+++++++++|++++|++
T Consensus 173 ~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~--~~~~t~~eia~~~s~~~G~~v~y~~ 233 (233)
T PF05368_consen 173 NQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA--GETLTYNEIAAILSKVLGKKVKYVQ 233 (233)
T ss_dssp TSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG--GGEEEHHHHHHHHHHHHTSEEEEEE
T ss_pred CccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC--CCCCCHHHHHHHHHHHHCCccEEeC
Confidence 334 59999999999999999854 6888887 7999999999999999999999874
No 2
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.85 E-value=1.4e-20 Score=152.94 Aligned_cols=162 Identities=15% Similarity=0.244 Sum_probs=124.3
Q ss_pred CCceEeccCCC-CCCCCcchhhhhchhhHHHHHHHHHHHHHC-CCCeEEEecchHHHhhhc-------------------
Q 046779 2 FISQRFFPSEF-GNDVDRVHAVELARTSFATKAKIRRAVEAE-RIPYTYVASNFFAGLYLS------------------- 60 (183)
Q Consensus 2 ~~VkrFiPSef-g~~~~~~~~~~~~~~~~~~k~~i~~~l~~~-gi~~T~i~~g~F~~~~~~------------------- 60 (183)
.||||||.+.. +..... ..+..++++++++ |++||+|||+|||+++..
T Consensus 95 ~gv~~~V~~Ss~~~~~~~-----------~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~ 163 (285)
T TIGR03649 95 KGVRRFVLLSASIIEKGG-----------PAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGD 163 (285)
T ss_pred cCCCEEEEeeccccCCCC-----------chHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCC
Confidence 58999998643 222110 1245678899986 999999999999998631
Q ss_pred --ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHcCCCccch-
Q 046779 61 --IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEASYPLNMI- 137 (183)
Q Consensus 61 --~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~~~p~~~~- 137 (183)
+++++.+|||++++.+|.++...++.+++.|+ +.+|++|+++++++++|+++++.+++.+++.+.+.+.+.|.+..
T Consensus 164 ~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~-~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 242 (285)
T TIGR03649 164 GKIPFVSADDIARVAYRALTDKVAPNTDYVVLGP-ELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLAR 242 (285)
T ss_pred CccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCC-ccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHH
Confidence 78999999999999999988777788888865 89999999999999999999999999999999998888887642
Q ss_pred -hhhheeeEEcCCCcCcccCCCCcccccccCCCCcccCHHHHHHhh
Q 046779 138 -LPIGHSAYVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQF 182 (183)
Q Consensus 138 -~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~p~~~~~t~~e~l~~~ 182 (183)
+..+......|... .+. ..-++..|.+|+||++|+++.
T Consensus 243 ~~~~~~~~~~~g~~~--~~~-----~~~~~~~G~~p~~~~~~~~~~ 281 (285)
T TIGR03649 243 MLASLDTAVKNGAEV--RLN-----DVVKAVTGSKPRGFRDFAESN 281 (285)
T ss_pred HHHHHHHHHhCCccc--ccc-----chHHHHhCcCCccHHHHHHHh
Confidence 33333333444432 111 122334599999999999975
No 3
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.59 E-value=2.1e-14 Score=118.57 Aligned_cols=117 Identities=21% Similarity=0.177 Sum_probs=95.2
Q ss_pred CCceEecc-CCCCCCCCcchhhhhchhhHHHHHHHHHHHHHCCCCeEEEecchHHHhhhc--------------------
Q 046779 2 FISQRFFP-SEFGNDVDRVHAVELARTSFATKAKIRRAVEAERIPYTYVASNFFAGLYLS-------------------- 60 (183)
Q Consensus 2 ~~VkrFiP-Sefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~~-------------------- 60 (183)
.||||||. |..|.... +..+....|.++|+++++++++||++|++.|++.+..
T Consensus 100 ~gvkr~I~~Ss~~~~~~------~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (317)
T CHL00194 100 AKIKRFIFFSILNAEQY------PYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTP 173 (317)
T ss_pred cCCCEEEEecccccccc------CCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCc
Confidence 58999997 33333211 2234567899999999999999999999999876431
Q ss_pred ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHH
Q 046779 61 IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLK 125 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~ 125 (183)
+++++.+|+|++++.++.+|...++.+++.|+ +.+|++|+++++.+++|++..+.+++....+-
T Consensus 174 ~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~-~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~ 237 (317)
T CHL00194 174 ISYIDTQDAAKFCLKSLSLPETKNKTFPLVGP-KSWNSSEIISLCEQLSGQKAKISRVPLFLLKL 237 (317)
T ss_pred cCccCHHHHHHHHHHHhcCccccCcEEEecCC-CccCHHHHHHHHHHHhCCCCeEEeCCHHHHHH
Confidence 56789999999999999988877899999854 89999999999999999999999998866533
No 4
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.16 E-value=3.5e-10 Score=96.35 Aligned_cols=116 Identities=16% Similarity=0.057 Sum_probs=91.0
Q ss_pred CCceEecc-CCCCCCCCcchhhhhchhhHHHHHHHHHHHHH--CCCCeEEEecchHHHhhhc------------------
Q 046779 2 FISQRFFP-SEFGNDVDRVHAVELARTSFATKAKIRRAVEA--ERIPYTYVASNFFAGLYLS------------------ 60 (183)
Q Consensus 2 ~~VkrFiP-Sefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~--~gi~~T~i~~g~F~~~~~~------------------ 60 (183)
.||||||- |..+.. .|.......|...+++|++ ++++||+|||++|+..+..
T Consensus 172 ~gv~r~V~iSS~~v~-------~p~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~ 244 (390)
T PLN02657 172 VGAKHFVLLSAICVQ-------KPLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGK 244 (390)
T ss_pred cCCCEEEEEeecccc-------CcchHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCc
Confidence 36888875 333321 1222345789999999986 8999999999999864321
Q ss_pred ---ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHH
Q 046779 61 ---IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLL 124 (183)
Q Consensus 61 ---~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~ 124 (183)
..+++.+|+|++++.++.+++..++.+.+.|+++.+|++|+++++.+++|++.++.+++...+.
T Consensus 245 ~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~ 311 (390)
T PLN02657 245 LCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD 311 (390)
T ss_pred ccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence 2358999999999999988877789999985546899999999999999999999999887665
No 5
>PLN00016 RNA-binding protein; Provisional
Probab=99.00 E-value=2e-09 Score=91.03 Aligned_cols=90 Identities=11% Similarity=0.216 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHCCCCeEEEecchHHH---------hhhc-----------------ccccChhHHHHHHHHhhcCCccCC
Q 046779 31 TKAKIRRAVEAERIPYTYVASNFFAG---------LYLS-----------------IIFNKEDDIGINSIKAVDDPRTLN 84 (183)
Q Consensus 31 ~k~~i~~~l~~~gi~~T~i~~g~F~~---------~~~~-----------------~~~t~~~Dia~~va~~l~~p~~~~ 84 (183)
.|..+|+++++.+++||+||+++++. +++. .++++.+|+|++++.++.+++..+
T Consensus 188 sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~ 267 (378)
T PLN00016 188 GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAG 267 (378)
T ss_pred hHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccC
Confidence 79999999999999999999987652 1211 468999999999999999887667
Q ss_pred eEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHH
Q 046779 85 KILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEE 121 (183)
Q Consensus 85 ~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~ 121 (183)
+.+++.|+ +.+|++|+++.+.++.|++.++.+.+.+
T Consensus 268 ~~yni~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 268 QIFNIVSD-RAVTFDGMAKACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred CEEEecCC-CccCHHHHHHHHHHHhCCCCceeecCcc
Confidence 88888843 7899999999999999998776655543
No 6
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.71 E-value=2e-07 Score=74.50 Aligned_cols=119 Identities=18% Similarity=0.149 Sum_probs=93.1
Q ss_pred CceEeccC-CCCCCCCcchhhhhchhhHHHHHHHHHHHHHCCCCeEEEecchHHHhhh----c----------------c
Q 046779 3 ISQRFFPS-EFGNDVDRVHAVELARTSFATKAKIRRAVEAERIPYTYVASNFFAGLYL----S----------------I 61 (183)
Q Consensus 3 ~VkrFiPS-efg~~~~~~~~~~~~~~~~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~----~----------------~ 61 (183)
++++++.. .++.+... ...+.+.|..+|+.++++|++||.+++.+|++... . +
T Consensus 98 ~~~~~~~~s~~~~~~~~------~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (275)
T COG0702 98 GVKHGVSLSVLGADAAS------PSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRL 171 (275)
T ss_pred CceEEEEeccCCCCCCC------ccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCce
Confidence 45666643 44443311 23467899999999999999999999777765321 1 6
Q ss_pred cccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHH
Q 046779 62 IFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQ 128 (183)
Q Consensus 62 ~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~ 128 (183)
+.+..+|++.++++++..|...++.+++.|+ +.+|+.|+++.+.++.|++..+...+...+.....
T Consensus 172 ~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~-~~~~~~~~~~~l~~~~gr~~~~~~~~~~~~~~~~~ 237 (275)
T COG0702 172 SPIAVDDVAEALAAALDAPATAGRTYELAGP-EALTLAELASGLDYTIGRPVGLIPEALAALTLALS 237 (275)
T ss_pred eeeEHHHHHHHHHHHhcCCcccCcEEEccCC-ceecHHHHHHHHHHHhCCcceeeCCcHHHHHHHhc
Confidence 7899999999999999999888899999966 89999999999999999999996666666555444
No 7
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.16 E-value=1.3e-05 Score=64.81 Aligned_cols=87 Identities=10% Similarity=0.007 Sum_probs=70.8
Q ss_pred hhHHHHHHHHHHHHHCCCCeEEEecchHHH-----hhhc-------------------ccccChhHHHHHHHHhhcCCcc
Q 046779 27 TSFATKAKIRRAVEAERIPYTYVASNFFAG-----LYLS-------------------IIFNKEDDIGINSIKAVDDPRT 82 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~~gi~~T~i~~g~F~~-----~~~~-------------------~~~t~~~Dia~~va~~l~~p~~ 82 (183)
.....|...|++++..+.+++++|+++++. ++.. .++++.+|+++++..++..+..
T Consensus 123 ~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 202 (287)
T TIGR01214 123 VYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLAR 202 (287)
T ss_pred hhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccC
Confidence 345789999999999999999999998762 2211 4678899999999999987655
Q ss_pred CCeEEEEecCCCccCHHHHHHHHHHHhCCcee
Q 046779 83 LNKILYIRPRCNIYSFNDLVSLWEEKIGKALD 114 (183)
Q Consensus 83 ~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~ 114 (183)
.++.+++.+ ++.+|+.|+++.+.+..|++..
T Consensus 203 ~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 203 ARGVYHLAN-SGQCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred CCCeEEEEC-CCCcCHHHHHHHHHHHhCcccc
Confidence 678888875 4789999999999999997643
No 8
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.03 E-value=4.8e-06 Score=62.96 Aligned_cols=78 Identities=15% Similarity=0.125 Sum_probs=56.9
Q ss_pred CCceEecc-CCCCCCCCcchh----hhhc-hhhHHHHHHHHHHHHHCCCCeEEEecchHHHhhhc------------ccc
Q 046779 2 FISQRFFP-SEFGNDVDRVHA----VELA-RTSFATKAKIRRAVEAERIPYTYVASNFFAGLYLS------------IIF 63 (183)
Q Consensus 2 ~~VkrFiP-Sefg~~~~~~~~----~~~~-~~~~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~~------------~~~ 63 (183)
.|+||||- |..|........ ..+. ...+..|.+.++.+++++++||+|+|++++++... ..+
T Consensus 88 ~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~ 167 (183)
T PF13460_consen 88 AGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNF 167 (183)
T ss_dssp TTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCE
T ss_pred cccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCc
Confidence 47888764 556654432211 0011 23468899999999999999999999999987522 778
Q ss_pred cChhHHHHHHHHhhcC
Q 046779 64 NKEDDIGINSIKAVDD 79 (183)
Q Consensus 64 t~~~Dia~~va~~l~~ 79 (183)
++..|+|++++.+|+|
T Consensus 168 i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 168 ISREDVAKAIVEALEN 183 (183)
T ss_dssp EEHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhCC
Confidence 9999999999999864
No 9
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.99 E-value=2.9e-05 Score=61.94 Aligned_cols=78 Identities=18% Similarity=0.167 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecchHHHhhhc------------ccccChhHHHHHHHHhhcCCccCCeEEEEecCC--C
Q 046779 29 FATKAKIRRAVEAERIPYTYVASNFFAGLYLS------------IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRC--N 94 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~~------------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~--~ 94 (183)
+..|...+++++++|++||+|+|||+.+.... ..+++.+|+|++++.++.+++..++.+.+.+.. -
T Consensus 158 ~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (251)
T PLN00141 158 LVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP 237 (251)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence 35688999999999999999999999864211 346899999999999999888767778887422 2
Q ss_pred ccCHHHHHHHHH
Q 046779 95 IYSFNDLVSLWE 106 (183)
Q Consensus 95 ~~T~~ev~~~~~ 106 (183)
..|++++.+.+.
T Consensus 238 ~~~~~~~~~~~~ 249 (251)
T PLN00141 238 KRSYKDLFASIK 249 (251)
T ss_pred chhHHHHHHHhh
Confidence 468888877654
No 10
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.78 E-value=0.00022 Score=59.00 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHH---CCCCeEEEecchHHHh----------hh-------------c------ccccChhHHHHHHHH
Q 046779 28 SFATKAKIRRAVEA---ERIPYTYVASNFFAGL----------YL-------------S------IIFNKEDDIGINSIK 75 (183)
Q Consensus 28 ~~~~k~~i~~~l~~---~gi~~T~i~~g~F~~~----------~~-------------~------~~~t~~~Dia~~va~ 75 (183)
....|...|..+++ .|++++++++|+++.. ++ + .++++.+|+|++++.
T Consensus 165 Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~ 244 (367)
T TIGR01746 165 YAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVA 244 (367)
T ss_pred hHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHH
Confidence 34688888888776 4999999999988741 11 0 448999999999999
Q ss_pred hhcCCccC--CeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHH
Q 046779 76 AVDDPRTL--NKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQE 129 (183)
Q Consensus 76 ~l~~p~~~--~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~ 129 (183)
++..+... ++.+++.++ +.+|++|+++.+.+ .|.+++ .++.+++...+..
T Consensus 245 ~~~~~~~~~~~~~~~v~~~-~~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~~ 296 (367)
T TIGR01746 245 LSSQPAASAGGPVFHVVNP-EPVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLED 296 (367)
T ss_pred HHhCCCcccCCceEEecCC-CCCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHHH
Confidence 99877632 678888854 89999999999999 898876 5788887776654
No 11
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=97.66 E-value=0.00049 Score=58.23 Aligned_cols=87 Identities=13% Similarity=-0.012 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH------------------hhh----c----------ccccChhHHHH
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG------------------LYL----S----------IIFNKEDDIGI 71 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~------------------~~~----~----------~~~t~~~Dia~ 71 (183)
.-..|...|+.++. .|++++++|++..+. ..+ + .+|++++|+++
T Consensus 167 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ 246 (370)
T PLN02695 167 YGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVE 246 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence 34688888877644 699999999863331 111 0 56899999999
Q ss_pred HHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEe
Q 046779 72 NSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVY 117 (183)
Q Consensus 72 ~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~ 117 (183)
++..++..+ .++.+++.+ ++.+|++|+++.+.+..|++.++..
T Consensus 247 ai~~~~~~~--~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~i~~ 289 (370)
T PLN02695 247 GVLRLTKSD--FREPVNIGS-DEMVSMNEMAEIALSFENKKLPIKH 289 (370)
T ss_pred HHHHHHhcc--CCCceEecC-CCceeHHHHHHHHHHHhCCCCCcee
Confidence 999987653 346777764 4889999999999999997665544
No 12
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.60 E-value=0.00036 Score=57.15 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHH----CCCCeEEEecchHHHh----------hh--------c------ccccChhHHHHHHHHhhcCC
Q 046779 29 FATKAKIRRAVEA----ERIPYTYVASNFFAGL----------YL--------S------IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 29 ~~~k~~i~~~l~~----~gi~~T~i~~g~F~~~----------~~--------~------~~~t~~~Dia~~va~~l~~p 80 (183)
-..|...|+.+++ .++++|++|++.++.- .+ + .++++.+|+|+++..++..+
T Consensus 142 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~ 221 (328)
T TIGR03466 142 KRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG 221 (328)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC
Confidence 3678887777765 5899999999765421 00 0 56889999999999999765
Q ss_pred ccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHH
Q 046779 81 RTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQ 122 (183)
Q Consensus 81 ~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~ 122 (183)
. .++.+.+. ++.+|++|+++.+.++.|++..+..++..-
T Consensus 222 ~-~~~~~~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 260 (328)
T TIGR03466 222 R-IGERYILG--GENLTLKQILDKLAEITGRPAPRVKLPRWL 260 (328)
T ss_pred C-CCceEEec--CCCcCHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence 4 45556554 689999999999999999987777776543
No 13
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00053 Score=61.86 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHH-CCCCeEEEecchHHH------------------hh---------hc--------ccccChhHHHH
Q 046779 28 SFATKAKIRRAVEA-ERIPYTYVASNFFAG------------------LY---------LS--------IIFNKEDDIGI 71 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-~gi~~T~i~~g~F~~------------------~~---------~~--------~~~t~~~Dia~ 71 (183)
....|...|+++++ .|+++|++|+++.+. .+ .+ ..+++.+|+++
T Consensus 151 Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ 230 (657)
T PRK07201 151 YHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVAD 230 (657)
T ss_pred hHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHH
Confidence 45889999999985 789999999975431 00 00 46788999999
Q ss_pred HHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCce---eEEeCCHH
Q 046779 72 NSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKAL---DRVYVTEE 121 (183)
Q Consensus 72 ~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~---~~~~~s~~ 121 (183)
++..++..+...++.+++.++ +.+|++|+++.+.+..|.+. .+..++..
T Consensus 231 ai~~~~~~~~~~g~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~ 282 (657)
T PRK07201 231 ALDHLMHKDGRDGQTFHLTDP-KPQRVGDIYNAFARAAGAPPDARLFGFLPGF 282 (657)
T ss_pred HHHHHhcCcCCCCCEEEeCCC-CCCcHHHHHHHHHHHhCCCccccccccCChH
Confidence 999998866666788888753 89999999999999999887 55555543
No 14
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.54 E-value=0.00044 Score=55.67 Aligned_cols=84 Identities=8% Similarity=-0.005 Sum_probs=63.5
Q ss_pred HHHCCCCeEEEecchHHHh-------hhc----------------ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCc
Q 046779 39 VEAERIPYTYVASNFFAGL-------YLS----------------IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNI 95 (183)
Q Consensus 39 l~~~gi~~T~i~~g~F~~~-------~~~----------------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~ 95 (183)
+++.+++++++|++.++.- +.. .++++.+|+|+++..++.++.. +..+++.+ ++.
T Consensus 150 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~-~~~ 227 (292)
T TIGR01777 150 AEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNATA-PEP 227 (292)
T ss_pred chhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEecC-CCc
Confidence 3456899999998887521 100 5889999999999999987663 45677764 489
Q ss_pred cCHHHHHHHHHHHhCCceeEEeCCHHHHHH
Q 046779 96 YSFNDLVSLWEEKIGKALDRVYVTEEQLLK 125 (183)
Q Consensus 96 ~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~ 125 (183)
+|+.|+++.+.+..|++..+ .++...++.
T Consensus 228 ~s~~di~~~i~~~~g~~~~~-~~p~~~~~~ 256 (292)
T TIGR01777 228 VRNKEFAKALARALHRPAFF-PVPAFVLRA 256 (292)
T ss_pred cCHHHHHHHHHHHhCCCCcC-cCCHHHHHH
Confidence 99999999999999987543 366655544
No 15
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.53 E-value=0.00023 Score=60.85 Aligned_cols=77 Identities=14% Similarity=0.033 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecchHHHhhhc----------------cc--ccChhHHHHHHHHhhcCCc-cCCeEEEE
Q 046779 29 FATKAKIRRAVEAERIPYTYVASNFFAGLYLS----------------II--FNKEDDIGINSIKAVDDPR-TLNKILYI 89 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~~----------------~~--~t~~~Dia~~va~~l~~p~-~~~~~~~v 89 (183)
+..|..++++++++|++||+|++|-++++... -. .++..|||+.++.+|.++. .+++.+.+
T Consensus 221 ~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~ 300 (411)
T KOG1203|consen 221 LKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVEL 300 (411)
T ss_pred hHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEe
Confidence 47899999999999999999999999987654 22 5788999999999999998 45577776
Q ss_pred ecCCCccCHHHHHHHHHH
Q 046779 90 RPRCNIYSFNDLVSLWEE 107 (183)
Q Consensus 90 ~~~~~~~T~~ev~~~~~~ 107 (183)
. ...-......+.+.+
T Consensus 301 v--~~~~gpg~~~~~l~~ 316 (411)
T KOG1203|consen 301 V--LKPEGPGRPYKVLLE 316 (411)
T ss_pred e--cCCCCCCccHHHHHh
Confidence 5 344444444444443
No 16
>PRK05865 hypothetical protein; Provisional
Probab=97.36 E-value=0.00071 Score=63.06 Aligned_cols=76 Identities=8% Similarity=0.114 Sum_probs=61.5
Q ss_pred HHHHHHHHHHCCCCeEEEecchHH----Hhhhc----------------ccccChhHHHHHHHHhhcCCccCCeEEEEec
Q 046779 32 KAKIRRAVEAERIPYTYVASNFFA----GLYLS----------------IIFNKEDDIGINSIKAVDDPRTLNKILYIRP 91 (183)
Q Consensus 32 k~~i~~~l~~~gi~~T~i~~g~F~----~~~~~----------------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~ 91 (183)
|...|+++++.+++++++|+++++ .+++. .+|++.+|+|+++..++..++..+..+++.+
T Consensus 106 K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgs 185 (854)
T PRK05865 106 QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAA 185 (854)
T ss_pred HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEEC
Confidence 788999999999999999999865 22221 4789999999999999876654567788875
Q ss_pred CCCccCHHHHHHHHHHH
Q 046779 92 RCNIYSFNDLVSLWEEK 108 (183)
Q Consensus 92 ~~~~~T~~ev~~~~~~~ 108 (183)
++.+|++|+++.+.+.
T Consensus 186 -g~~~Si~EIae~l~~~ 201 (854)
T PRK05865 186 -PGELTFRRIAAALGRP 201 (854)
T ss_pred -CCcccHHHHHHHHhhh
Confidence 4789999999999874
No 17
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.35 E-value=0.0014 Score=53.81 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=79.7
Q ss_pred CCceEeccCC----CCCCCCcc----hhhhhchhhHHHHHHHHHHHHH----CCCCeEEEec----chHHH---------
Q 046779 2 FISQRFFPSE----FGNDVDRV----HAVELARTSFATKAKIRRAVEA----ERIPYTYVAS----NFFAG--------- 56 (183)
Q Consensus 2 ~~VkrFiPSe----fg~~~~~~----~~~~~~~~~~~~k~~i~~~l~~----~gi~~T~i~~----g~F~~--------- 56 (183)
+|||.||.|. ||.....+ .+..|.+|.-..|..+|+.|+. .+++++++|- |.-.+
T Consensus 108 ~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~ 187 (329)
T COG1087 108 TGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPG 187 (329)
T ss_pred hCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCC
Confidence 5899999986 55432211 1112334556899999999986 6788999872 22221
Q ss_pred --hhhc----------------------------ccccChhHHHHHHHHhhcCCc--cCCeEEEEecCCCccCHHHHHHH
Q 046779 57 --LYLS----------------------------IIFNKEDDIGINSIKAVDDPR--TLNKILYIRPRCNIYSFNDLVSL 104 (183)
Q Consensus 57 --~~~~----------------------------~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~~~~~~T~~ev~~~ 104 (183)
+++| -+|+++.|+|++=..+|..-+ ..+..+++ |.|.-.|..|+++.
T Consensus 188 ~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NL-G~G~G~SV~evi~a 266 (329)
T COG1087 188 ATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNL-GSGNGFSVLEVIEA 266 (329)
T ss_pred cchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEc-cCCCceeHHHHHHH
Confidence 1111 578999999999888875322 22344554 55789999999999
Q ss_pred HHHHhCCceeEEeC
Q 046779 105 WEEKIGKALDRVYV 118 (183)
Q Consensus 105 ~~~~~G~~~~~~~~ 118 (183)
+++++|+++.++..
T Consensus 267 ~~~vtg~~ip~~~~ 280 (329)
T COG1087 267 AKKVTGRDIPVEIA 280 (329)
T ss_pred HHHHhCCcCceeeC
Confidence 99999999988754
No 18
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.32 E-value=0.0015 Score=53.20 Aligned_cols=90 Identities=9% Similarity=0.035 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHHH-----CCCCeEEEecchHH-------------------H----hhh-------------c------
Q 046779 28 SFATKAKIRRAVEA-----ERIPYTYVASNFFA-------------------G----LYL-------------S------ 60 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-----~gi~~T~i~~g~F~-------------------~----~~~-------------~------ 60 (183)
....|..++.++++ .+++++++|++..+ . ... +
T Consensus 145 y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (328)
T TIGR01179 145 YGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTC 224 (328)
T ss_pred hHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCce
Confidence 45788998888764 68999999973221 1 100 0
Q ss_pred -ccccChhHHHHHHHHhhcCCc--cCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeC
Q 046779 61 -IIFNKEDDIGINSIKAVDDPR--TLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYV 118 (183)
Q Consensus 61 -~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~ 118 (183)
.+|++..|+|+++..++.... ..++.+++.+ ++.+|.+|+++.+.++.|+++++...
T Consensus 225 ~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~-~~~~s~~ei~~~~~~~~g~~~~~~~~ 284 (328)
T TIGR01179 225 VRDYIHVMDLADAHLAALEYLLNGGESHVYNLGY-GQGFSVLEVIEAFKKVSGVDFPVELA 284 (328)
T ss_pred EEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCC-CCcccHHHHHHHHHHHhCCCcceEeC
Confidence 357899999999999986532 3467788864 47899999999999999998776543
No 19
>PLN02240 UDP-glucose 4-epimerase
Probab=97.26 E-value=0.0037 Score=51.91 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=44.4
Q ss_pred ccccChhHHHHHHHHhhcCC----ccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeC
Q 046779 61 IIFNKEDDIGINSIKAVDDP----RTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYV 118 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p----~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~ 118 (183)
.+|++++|+|++++.++... ...++.+++.+ ++.+|.+|+++.+.++.|++.++...
T Consensus 238 ~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~~~ 298 (352)
T PLN02240 238 RDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLKLA 298 (352)
T ss_pred EeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCceeC
Confidence 35789999999988887542 23346777764 58999999999999999987776554
No 20
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.25 E-value=0.0017 Score=52.65 Aligned_cols=83 Identities=17% Similarity=0.060 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHH----HCCCCeEEEecchHHH------hhhc---------------------ccccChhHHHHHHHHh
Q 046779 28 SFATKAKIRRAVE----AERIPYTYVASNFFAG------LYLS---------------------IIFNKEDDIGINSIKA 76 (183)
Q Consensus 28 ~~~~k~~i~~~l~----~~gi~~T~i~~g~F~~------~~~~---------------------~~~t~~~Dia~~va~~ 76 (183)
....|..++.+++ +.+++++++|++..+. .+.+ .++++.+|+|+++..+
T Consensus 150 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~ 229 (317)
T TIGR01181 150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLV 229 (317)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHH
Confidence 4467888887765 3689999999985441 1111 4688999999999999
Q ss_pred hcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 77 VDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 77 l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
+..+. .++.+.+.+ ++.+|+.|+++.+.++.|++
T Consensus 230 ~~~~~-~~~~~~~~~-~~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 230 LEKGR-VGETYNIGG-GNERTNLEVVETILELLGKD 263 (317)
T ss_pred HcCCC-CCceEEeCC-CCceeHHHHHHHHHHHhCCC
Confidence 97543 456777764 47899999999999999974
No 21
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.23 E-value=0.003 Score=52.66 Aligned_cols=83 Identities=16% Similarity=0.019 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHH----HCCCCeEEEecchHHH----------hhhc-----------------ccccChhHHHHHHHHh
Q 046779 28 SFATKAKIRRAVE----AERIPYTYVASNFFAG----------LYLS-----------------IIFNKEDDIGINSIKA 76 (183)
Q Consensus 28 ~~~~k~~i~~~l~----~~gi~~T~i~~g~F~~----------~~~~-----------------~~~t~~~Dia~~va~~ 76 (183)
.-..|...+.+++ +.++++++++++..+. .++. .+|++++|+++++..+
T Consensus 160 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~ 239 (355)
T PRK10217 160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV 239 (355)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHH
Confidence 3467888877765 3689999999864321 1100 6789999999999999
Q ss_pred hcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 77 VDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 77 l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
+..+. .++.+++.+ ++.+|++|+++.+.+..|+.
T Consensus 240 ~~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 240 ATTGK-VGETYNIGG-HNERKNLDVVETICELLEEL 273 (355)
T ss_pred HhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhccc
Confidence 87543 457788874 47899999999999999864
No 22
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.21 E-value=0.0033 Score=51.91 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=45.7
Q ss_pred ccccChhHHHHHHHHhhcCC--ccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCC
Q 046779 61 IIFNKEDDIGINSIKAVDDP--RTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVT 119 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p--~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s 119 (183)
.+|++++|+|++++.++.++ ...++.+++.+ ++.+|++|+++.+.+..|+++++...+
T Consensus 231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T PRK10675 231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNLGA-GVGSSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_pred EeeEEHHHHHHHHHHHHHhhhccCCCceEEecC-CCceeHHHHHHHHHHHhCCCCCeeeCC
Confidence 46899999999999998753 22346777764 478999999999999999887765543
No 23
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.18 E-value=0.0024 Score=52.37 Aligned_cols=80 Identities=13% Similarity=0.143 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHH----HCCCCeEEEecchHHHhh-------h--------------c---ccccChhHHHHHHHHhhcCC
Q 046779 29 FATKAKIRRAVE----AERIPYTYVASNFFAGLY-------L--------------S---IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 29 ~~~k~~i~~~l~----~~gi~~T~i~~g~F~~~~-------~--------------~---~~~t~~~Dia~~va~~l~~p 80 (183)
...|...|++++ +.+++++++|++..+.-. . + .+|++++|+|+++.+++..+
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 242 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP 242 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence 356877777654 479999999999764210 0 0 47899999999999999877
Q ss_pred ccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 81 RTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 81 ~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
... ..+++. +..+|++|+++++.+..+.
T Consensus 243 ~~~-~~~~~~--g~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 243 SAS-GRYCLV--ERVVHYSEVVKILHELYPT 270 (322)
T ss_pred CcC-CcEEEe--CCCCCHHHHHHHHHHHCCC
Confidence 543 456777 6789999999999998764
No 24
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.09 E-value=0.0035 Score=52.39 Aligned_cols=109 Identities=12% Similarity=0.030 Sum_probs=71.4
Q ss_pred CCceEec-cC---CCCCCCCcc---h-hhhhchhhHHHHHHHHHHHHH----CCCCeEEEecchHHH----------hhh
Q 046779 2 FISQRFF-PS---EFGNDVDRV---H-AVELARTSFATKAKIRRAVEA----ERIPYTYVASNFFAG----------LYL 59 (183)
Q Consensus 2 ~~VkrFi-PS---efg~~~~~~---~-~~~~~~~~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~----------~~~ 59 (183)
.|||||| +| .||.....+ + ...|..+.-..|...|..++. .+++++++|++..+. .++
T Consensus 131 ~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i 210 (348)
T PRK15181 131 AHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVI 210 (348)
T ss_pred cCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCH
Confidence 3788888 33 466432111 0 001222334678777776653 589999999874421 111
Q ss_pred c---------------------ccccChhHHHHHHHHhhcCCc--cCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 60 S---------------------IIFNKEDDIGINSIKAVDDPR--TLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 60 ~---------------------~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
+ .+|++++|+++++..++..+. ..++.+++.+ ++.+|++|+++.+.++.+.
T Consensus 211 ~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~-g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 211 PRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAV-GDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred HHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecC-CCcEeHHHHHHHHHHHhCc
Confidence 1 688999999999988775432 2456777763 5899999999999999874
No 25
>PLN02427 UDP-apiose/xylose synthase
Probab=97.06 E-value=0.0034 Score=53.18 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH-------------------------hhhc-------------ccccC
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG-------------------------LYLS-------------IIFNK 65 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~-------------------------~~~~-------------~~~t~ 65 (183)
....|...|+++++ .+++++++|++..+. ..+. .+|++
T Consensus 182 Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~ 261 (386)
T PLN02427 182 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVY 261 (386)
T ss_pred hHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEe
Confidence 34689999988865 589999999853321 1110 47999
Q ss_pred hhHHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 66 EDDIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 66 ~~Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
++|+|+++..++.++. ..++.+++.+++..+|++|+++.+.+..|+
T Consensus 262 V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 262 IKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred HHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 9999999999998764 345678887322489999999999999885
No 26
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.05 E-value=0.0049 Score=53.51 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=64.0
Q ss_pred hhHHHHHHHHHHHHH----CCCCeEEEecchHHH-----------------------hhhc-------------------
Q 046779 27 TSFATKAKIRRAVEA----ERIPYTYVASNFFAG-----------------------LYLS------------------- 60 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~-----------------------~~~~------------------- 60 (183)
+.-..|...|..++. .|++++++|++..+. ..++
T Consensus 227 ~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~ 306 (442)
T PLN02572 227 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGG 306 (442)
T ss_pred cchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCC
Confidence 344778887777654 599999988765531 0000
Q ss_pred --ccccChhHHHHHHHHhhcCCccCC--eEEEEecCCCccCHHHHHHHHHHH---hCCceeEEe
Q 046779 61 --IIFNKEDDIGINSIKAVDDPRTLN--KILYIRPRCNIYSFNDLVSLWEEK---IGKALDRVY 117 (183)
Q Consensus 61 --~~~t~~~Dia~~va~~l~~p~~~~--~~~~v~~~~~~~T~~ev~~~~~~~---~G~~~~~~~ 117 (183)
.+|++++|+++++..++..+...+ ..+++. +..+|.+|+++++.++ +|++..+..
T Consensus 307 ~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig--s~~~si~el~~~i~~~~~~~g~~~~~~~ 368 (442)
T PLN02572 307 QTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF--TEQFSVNELAKLVTKAGEKLGLDVEVIS 368 (442)
T ss_pred EEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC--CCceeHHHHHHHHHHHHHhhCCCCCeee
Confidence 488999999999999997653233 356665 5789999999999999 887655543
No 27
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.04 E-value=0.0025 Score=52.42 Aligned_cols=79 Identities=22% Similarity=0.251 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHH----HCCCCeEEEecchHHHhh-------hc-----------------ccccChhHHHHHHHHhhcCC
Q 046779 29 FATKAKIRRAVE----AERIPYTYVASNFFAGLY-------LS-----------------IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 29 ~~~k~~i~~~l~----~~gi~~T~i~~g~F~~~~-------~~-----------------~~~t~~~Dia~~va~~l~~p 80 (183)
...|...|.+++ +.++++++++++..+.-. .. .+|++++|+|+++..++..+
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~ 243 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETP 243 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCc
Confidence 467777766554 479999999998765210 00 36899999999999999987
Q ss_pred ccCCeEEEEecCCCccCHHHHHHHHHHHhC
Q 046779 81 RTLNKILYIRPRCNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 81 ~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G 110 (183)
... ..+.+. +..+|++|+++++.+..+
T Consensus 244 ~~~-~~yni~--~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 244 SAN-GRYIID--GPIMSVNDIIDILRELFP 270 (322)
T ss_pred ccC-CcEEEe--cCCCCHHHHHHHHHHHCC
Confidence 643 467776 578999999999999987
No 28
>PLN02583 cinnamoyl-CoA reductase
Probab=96.88 E-value=0.0053 Score=50.19 Aligned_cols=79 Identities=13% Similarity=0.088 Sum_probs=59.4
Q ss_pred HHHHHHHHHHH----HCCCCeEEEecchHHHhh-------hc----------ccccChhHHHHHHHHhhcCCccCCeEEE
Q 046779 30 ATKAKIRRAVE----AERIPYTYVASNFFAGLY-------LS----------IIFNKEDDIGINSIKAVDDPRTLNKILY 88 (183)
Q Consensus 30 ~~k~~i~~~l~----~~gi~~T~i~~g~F~~~~-------~~----------~~~t~~~Dia~~va~~l~~p~~~~~~~~ 88 (183)
..|...|+++. +.|+++++|+|++.+.=. +. ..+++++|+|++...+|.++...++ +.
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r-~~ 243 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGR-YL 243 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCCc-EE
Confidence 56888888774 469999999999875211 00 5799999999999999998876554 55
Q ss_pred EecCCCcc-CHHHHHHHHHHHhCC
Q 046779 89 IRPRCNIY-SFNDLVSLWEEKIGK 111 (183)
Q Consensus 89 v~~~~~~~-T~~ev~~~~~~~~G~ 111 (183)
+. +..+ +..++++++.+....
T Consensus 244 ~~--~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 244 CF--NHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred Ee--cCCCccHHHHHHHHHHhCCC
Confidence 55 4444 468899999997653
No 29
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=96.85 E-value=0.012 Score=49.03 Aligned_cols=85 Identities=21% Similarity=0.175 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH------------------hhh----c-------------ccccChhH
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG------------------LYL----S-------------IIFNKEDD 68 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~------------------~~~----~-------------~~~t~~~D 68 (183)
.-..|...+++++. .+++++++|++.++. .++ . .+|++.+|
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D 228 (347)
T PRK11908 149 YACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDD 228 (347)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHH
Confidence 34788888888864 689999999743311 111 0 46899999
Q ss_pred HHHHHHHhhcCCc--cCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 69 IGINSIKAVDDPR--TLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 69 ia~~va~~l~~p~--~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
+++++..++..+. ..++.+++.+++..+|.+|+++.+.+.+|..
T Consensus 229 ~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~ 274 (347)
T PRK11908 229 GIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEY 274 (347)
T ss_pred HHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCc
Confidence 9999999998764 3467788874324799999999999999964
No 30
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.85 E-value=0.003 Score=51.64 Aligned_cols=93 Identities=13% Similarity=0.015 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecchHHH--------hhhc---------------ccccChhHHHHHHHHhhcCCc---c
Q 046779 29 FATKAKIRRAVEAERIPYTYVASNFFAG--------LYLS---------------IIFNKEDDIGINSIKAVDDPR---T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~T~i~~g~F~~--------~~~~---------------~~~t~~~Dia~~va~~l~~p~---~ 82 (183)
-..|...|+++++..-.+++||.+|.+. +++. .+.|+..|+|+++.+++.... .
T Consensus 126 G~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~ 205 (286)
T PF04321_consen 126 GRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGAS 205 (286)
T ss_dssp HHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GG
T ss_pred HHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccc
Confidence 4899999999998666999999998542 2221 678999999999999997543 2
Q ss_pred CCeEEEEecCCCccCHHHHHHHHHHHhCCce-eEEeCCHHH
Q 046779 83 LNKILYIRPRCNIYSFNDLVSLWEEKIGKAL-DRVYVTEEQ 122 (183)
Q Consensus 83 ~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~-~~~~~s~~~ 122 (183)
....+++.|+ +.+|.-|+++.+.+..|.+. .+..++.++
T Consensus 206 ~~Giyh~~~~-~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~ 245 (286)
T PF04321_consen 206 PWGIYHLSGP-ERVSRYEFAEAIAKILGLDPELIKPVSSSE 245 (286)
T ss_dssp G-EEEE---B-S-EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred cceeEEEecC-cccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence 4578898865 88999999999999999876 555554433
No 31
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=96.83 E-value=0.0048 Score=50.58 Aligned_cols=112 Identities=20% Similarity=0.173 Sum_probs=82.3
Q ss_pred CCceEecc-CCCCCCCCcchhhhhchhhHHHHHHHHHHHHHCCCCeEEEecchH-------HHhhhc-------c-----
Q 046779 2 FISQRFFP-SEFGNDVDRVHAVELARTSFATKAKIRRAVEAERIPYTYVASNFF-------AGLYLS-------I----- 61 (183)
Q Consensus 2 ~~VkrFiP-Sefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~~gi~~T~i~~g~F-------~~~~~~-------~----- 61 (183)
.||.|||= |-.|.+.. ....++..|..-|.++++.--+.|+|+|.-- ++++.. +
T Consensus 167 ~GVerfIhvS~Lganv~------s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~ 240 (391)
T KOG2865|consen 167 AGVERFIHVSCLGANVK------SPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGK 240 (391)
T ss_pred hChhheeehhhcccccc------ChHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecC
Confidence 47888885 34443321 2345789999999999998888999999743 333321 1
Q ss_pred ------cccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCH
Q 046779 62 ------IFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTE 120 (183)
Q Consensus 62 ------~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~ 120 (183)
.-+-+-|||..++.++.||+..++++.+.|| +..+..|+++..-+..-+--.|...+.
T Consensus 241 GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP-~~yql~eLvd~my~~~~~~~ry~r~~m 304 (391)
T KOG2865|consen 241 GEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGP-DRYQLSELVDIMYDMAREWPRYVRLPM 304 (391)
T ss_pred CcceeeccEEEehHHHHHHHhccCccccCceeeecCC-chhhHHHHHHHHHHHHhhccccccCCc
Confidence 1255789999999999999988999999987 899999999988877654334544444
No 32
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=96.80 E-value=0.011 Score=49.26 Aligned_cols=84 Identities=17% Similarity=0.041 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHHHHH----CCCCeEEEecchHHH------hhhc---------------------ccccChhHHHHHHHH
Q 046779 27 TSFATKAKIRRAVEA----ERIPYTYVASNFFAG------LYLS---------------------IIFNKEDDIGINSIK 75 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~------~~~~---------------------~~~t~~~Dia~~va~ 75 (183)
..-..|...|.+++. .|+++++++++..+. .+++ .++++++|+++++..
T Consensus 166 ~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~ 245 (352)
T PRK10084 166 PYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYK 245 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHH
Confidence 334678888887764 589999998754321 0010 578999999999998
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
++..+. .++.+++.+ ++..|..|+++.+.+..|+.
T Consensus 246 ~l~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 246 VVTEGK-AGETYNIGG-HNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHhcCC-CCceEEeCC-CCcCcHHHHHHHHHHHhccc
Confidence 887533 467778763 47899999999999999864
No 33
>PLN02686 cinnamoyl-CoA reductase
Probab=96.77 E-value=0.0068 Score=51.25 Aligned_cols=86 Identities=12% Similarity=0.101 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHH----CCCCeEEEecchHHHh------h--h-----------c---ccccChhHHHHHHHHhhcCC--
Q 046779 29 FATKAKIRRAVEA----ERIPYTYVASNFFAGL------Y--L-----------S---IIFNKEDDIGINSIKAVDDP-- 80 (183)
Q Consensus 29 ~~~k~~i~~~l~~----~gi~~T~i~~g~F~~~------~--~-----------~---~~~t~~~Dia~~va~~l~~p-- 80 (183)
-..|...|.+++. .|+++++|++++.+-- . + + .++++++|++++...++..+
T Consensus 217 ~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~ 296 (367)
T PLN02686 217 ALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGN 296 (367)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCC
Confidence 4678888888753 5899999999876421 0 0 0 47899999999999999743
Q ss_pred ccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEE
Q 046779 81 RTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRV 116 (183)
Q Consensus 81 ~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~ 116 (183)
...+..+ +.+ +..+|.+|+++.+.+++|.+....
T Consensus 297 ~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~ 330 (367)
T PLN02686 297 KTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKI 330 (367)
T ss_pred CCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcC
Confidence 2334445 442 689999999999999999876543
No 34
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.64 E-value=0.02 Score=46.62 Aligned_cols=86 Identities=15% Similarity=0.018 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHH------CCCCeEEEecchHH---------------Hhhhc----------------------cccc
Q 046779 28 SFATKAKIRRAVEA------ERIPYTYVASNFFA---------------GLYLS----------------------IIFN 64 (183)
Q Consensus 28 ~~~~k~~i~~~l~~------~gi~~T~i~~g~F~---------------~~~~~----------------------~~~t 64 (183)
.-..|...|.++++ .+++++++|++..+ +.+.. .+++
T Consensus 138 Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 217 (314)
T TIGR02197 138 YGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV 217 (314)
T ss_pred HHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence 34689888888764 35788888874321 11100 3689
Q ss_pred ChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEE
Q 046779 65 KEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRV 116 (183)
Q Consensus 65 ~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~ 116 (183)
+.+|+++++..++.. ..++.+++.+ ++.+|++|+++.+.+..|++.++.
T Consensus 218 ~v~D~a~~i~~~~~~--~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~ 266 (314)
T TIGR02197 218 YVKDVVDVNLWLLEN--GVSGIFNLGT-GRARSFNDLADAVFKALGKDEKIE 266 (314)
T ss_pred EHHHHHHHHHHHHhc--ccCceEEcCC-CCCccHHHHHHHHHHHhCCCCcce
Confidence 999999999999976 2456777764 489999999999999999765433
No 35
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.61 E-value=0.011 Score=48.68 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH-------hhhc-----------------ccccChhHHHHHHHHhhcC
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG-------LYLS-----------------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~-------~~~~-----------------~~~t~~~Dia~~va~~l~~ 79 (183)
....|...|++++. .+++++++|++..+. ++.. -.|++++|+|+++..++..
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~ 243 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALET 243 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence 34688888887754 689999999886642 1110 2678899999999999987
Q ss_pred CccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 80 PRTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 80 p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
++. +..+++. +..+|++|+++.+.+..|.
T Consensus 244 ~~~-~~~~ni~--~~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 244 PSA-NGRYIID--GPVVTIKDIENVLREFFPD 272 (325)
T ss_pred ccc-CceEEEe--cCCCCHHHHHHHHHHHCCC
Confidence 663 4567775 5689999999999999874
No 36
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.54 E-value=0.01 Score=53.05 Aligned_cols=80 Identities=15% Similarity=0.110 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHCCCCeEEEecchHH---Hhhh-----c--------ccccChhHHHHHHHHhhcCCc-cCCeEEEEe
Q 046779 28 SFATKAKIRRAVEAERIPYTYVASNFFA---GLYL-----S--------IIFNKEDDIGINSIKAVDDPR-TLNKILYIR 90 (183)
Q Consensus 28 ~~~~k~~i~~~l~~~gi~~T~i~~g~F~---~~~~-----~--------~~~t~~~Dia~~va~~l~~p~-~~~~~~~v~ 90 (183)
....|...+++|+++||+||+|++|+.. +.+. . -..++..|||++++.++.+++ ..++.+.+.
T Consensus 227 ~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi 306 (576)
T PLN03209 227 VLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVI 306 (576)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEE
Confidence 4578999999999999999999999874 2110 0 134789999999999999886 678999888
Q ss_pred cCCCccCHHHHHHHHHHH
Q 046779 91 PRCNIYSFNDLVSLWEEK 108 (183)
Q Consensus 91 ~~~~~~T~~ev~~~~~~~ 108 (183)
++ .......+.++++.+
T Consensus 307 ~~-~~~p~~~~~~~~~~i 323 (576)
T PLN03209 307 AE-TTAPLTPMEELLAKI 323 (576)
T ss_pred eC-CCCCCCCHHHHHHhc
Confidence 33 333334455555544
No 37
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.47 E-value=0.021 Score=46.75 Aligned_cols=86 Identities=10% Similarity=0.069 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecchHHHh----hhc-------------------ccccChhHHHHHHHHhhcCCccCCe
Q 046779 29 FATKAKIRRAVEAERIPYTYVASNFFAGL----YLS-------------------IIFNKEDDIGINSIKAVDDPRTLNK 85 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~T~i~~g~F~~~----~~~-------------------~~~t~~~Dia~~va~~l~~p~~~~~ 85 (183)
-..|..-|+++++.+-.+++||.+|.+.. |.. .+-|+..|+|+++..+|.... ...
T Consensus 125 G~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~-~~~ 203 (281)
T COG1091 125 GRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK-EGG 203 (281)
T ss_pred hHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc-cCc
Confidence 38999999999999999999999998753 321 567999999999999987443 234
Q ss_pred EEEEecCCCccCHHHHHHHHHHHhCCceeEE
Q 046779 86 ILYIRPRCNIYSFNDLVSLWEEKIGKALDRV 116 (183)
Q Consensus 86 ~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~ 116 (183)
.+.+.+. ..+|+=|++..+.+..|.+-++.
T Consensus 204 ~yH~~~~-g~~Swydfa~~I~~~~~~~~~v~ 233 (281)
T COG1091 204 VYHLVNS-GECSWYEFAKAIFEEAGVDGEVI 233 (281)
T ss_pred EEEEeCC-CcccHHHHHHHHHHHhCCCcccc
Confidence 7888754 56899999999999998765544
No 38
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=96.46 E-value=0.025 Score=49.11 Aligned_cols=86 Identities=7% Similarity=0.008 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHH----CCCCeEEEecchHH------------Hhhhc-----------------ccccChhHHHHHHHH
Q 046779 29 FATKAKIRRAVEA----ERIPYTYVASNFFA------------GLYLS-----------------IIFNKEDDIGINSIK 75 (183)
Q Consensus 29 ~~~k~~i~~~l~~----~gi~~T~i~~g~F~------------~~~~~-----------------~~~t~~~Dia~~va~ 75 (183)
-..|...|+.++. .+++++++|++..+ .+++. .+|++++|+++++..
T Consensus 264 g~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~ 343 (436)
T PLN02166 264 DEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVA 343 (436)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHH
Confidence 3678888887654 58999999854322 12211 578999999999999
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEe
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVY 117 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~ 117 (183)
++..+. +..+++.+ ++.+|..|+++.+.++.|.+.++..
T Consensus 344 ~~~~~~--~giyNIgs-~~~~Si~ela~~I~~~~g~~~~i~~ 382 (436)
T PLN02166 344 LMEGEH--VGPFNLGN-PGEFTMLELAEVVKETIDSSATIEF 382 (436)
T ss_pred HHhcCC--CceEEeCC-CCcEeHHHHHHHHHHHhCCCCCeee
Confidence 986443 45777763 4789999999999999997655443
No 39
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.42 E-value=0.014 Score=53.21 Aligned_cols=84 Identities=15% Similarity=0.043 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHH----CCCCeEEEecchHHH------hhhc---------------------ccccChhHHHHHHHH
Q 046779 27 TSFATKAKIRRAVEA----ERIPYTYVASNFFAG------LYLS---------------------IIFNKEDDIGINSIK 75 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~------~~~~---------------------~~~t~~~Dia~~va~ 75 (183)
+....|...|+.+++ .+++++++|++..+. .+++ .+|++++|+|+++..
T Consensus 158 ~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~ 237 (668)
T PLN02260 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEV 237 (668)
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHH
Confidence 345789999988864 589999999864431 1111 578999999999999
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
++..+. .++.+++.+ ++.+|+.|+++.+.+..|.+
T Consensus 238 ~l~~~~-~~~vyni~~-~~~~s~~el~~~i~~~~g~~ 272 (668)
T PLN02260 238 VLHKGE-VGHVYNIGT-KKERRVIDVAKDICKLFGLD 272 (668)
T ss_pred HHhcCC-CCCEEEECC-CCeeEHHHHHHHHHHHhCCC
Confidence 886543 457778764 47899999999999999975
No 40
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.40 E-value=0.017 Score=46.78 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHC----CCCeEEEecchHHH---------hhh-------c---------------ccccChhHHHHH
Q 046779 28 SFATKAKIRRAVEAE----RIPYTYVASNFFAG---------LYL-------S---------------IIFNKEDDIGIN 72 (183)
Q Consensus 28 ~~~~k~~i~~~l~~~----gi~~T~i~~g~F~~---------~~~-------~---------------~~~t~~~Dia~~ 72 (183)
.-..|...|+++++. |++++++|++..+. .+. . ..+++++|++++
T Consensus 142 Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 221 (314)
T COG0451 142 YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA 221 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHH
Confidence 357899999998873 69999999874431 011 0 257889999999
Q ss_pred HHHhhcCCccCCeEEEEecCCC-ccCHHHHHHHHHHHhCCcee
Q 046779 73 SIKAVDDPRTLNKILYIRPRCN-IYSFNDLVSLWEEKIGKALD 114 (183)
Q Consensus 73 va~~l~~p~~~~~~~~v~~~~~-~~T~~ev~~~~~~~~G~~~~ 114 (183)
+..++.++... .+++.+ +. .+|.+|+++.+.+..|.+..
T Consensus 222 ~~~~~~~~~~~--~~ni~~-~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 222 LLLALENPDGG--VFNIGS-GTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred HHHHHhCCCCc--EEEeCC-CCCcEEHHHHHHHHHHHhCCCCc
Confidence 99999987744 667762 23 79999999999999998755
No 41
>PLN02214 cinnamoyl-CoA reductase
Probab=96.37 E-value=0.022 Score=47.56 Aligned_cols=80 Identities=9% Similarity=0.116 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHH----CCCCeEEEecchHHH---h---------hhc-------------ccccChhHHHHHHHHhhcC
Q 046779 29 FATKAKIRRAVEA----ERIPYTYVASNFFAG---L---------YLS-------------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 29 ~~~k~~i~~~l~~----~gi~~T~i~~g~F~~---~---------~~~-------------~~~t~~~Dia~~va~~l~~ 79 (183)
...|...|++++. .|++++++|++..+. . +.. .+|++++|+|++...++..
T Consensus 162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA 241 (342)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence 4678888888754 589999999876642 0 000 3789999999999999987
Q ss_pred CccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 80 PRTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 80 p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
+.. +..+++. +..+|++|+++++.+..+.
T Consensus 242 ~~~-~g~yn~~--~~~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 242 PSA-SGRYLLA--ESARHRGEVVEILAKLFPE 270 (342)
T ss_pred ccc-CCcEEEe--cCCCCHHHHHHHHHHHCCC
Confidence 653 3456776 4678999999999999863
No 42
>PLN02206 UDP-glucuronate decarboxylase
Probab=96.37 E-value=0.036 Score=48.21 Aligned_cols=86 Identities=7% Similarity=0.017 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHH----CCCCeEEEecchHH------------Hhhhc-----------------ccccChhHHHHHHHH
Q 046779 29 FATKAKIRRAVEA----ERIPYTYVASNFFA------------GLYLS-----------------IIFNKEDDIGINSIK 75 (183)
Q Consensus 29 ~~~k~~i~~~l~~----~gi~~T~i~~g~F~------------~~~~~-----------------~~~t~~~Dia~~va~ 75 (183)
...|...|+.++. .++++++++++..+ .+++. .+|++++|+|+++..
T Consensus 263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~ 342 (442)
T PLN02206 263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR 342 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHH
Confidence 4678888887753 68999998853222 11111 468999999999998
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEe
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVY 117 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~ 117 (183)
++..+. +..+++.+ ++.+|++|+++.+.+..|.+.++..
T Consensus 343 a~e~~~--~g~yNIgs-~~~~sl~Elae~i~~~~g~~~~i~~ 381 (442)
T PLN02206 343 LMEGEH--VGPFNLGN-PGEFTMLELAKVVQETIDPNAKIEF 381 (442)
T ss_pred HHhcCC--CceEEEcC-CCceeHHHHHHHHHHHhCCCCceee
Confidence 886442 45778774 4789999999999999987655443
No 43
>PLN02650 dihydroflavonol-4-reductase
Probab=96.18 E-value=0.028 Score=46.86 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH-------------hh--h-c----------ccccChhHHHHHHHHhh
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG-------------LY--L-S----------IIFNKEDDIGINSIKAV 77 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~-------------~~--~-~----------~~~t~~~Dia~~va~~l 77 (183)
....|...|.+++. .|+++++++++..+. .. . . .+|++++|+++++..++
T Consensus 163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l 242 (351)
T PLN02650 163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLF 242 (351)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHh
Confidence 34678888876644 599999999886321 00 0 0 37899999999999999
Q ss_pred cCCccCCeEEEEecCCCccCHHHHHHHHHHHhC
Q 046779 78 DDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 78 ~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G 110 (183)
.++...+ .+ +.+ +..+|.+|+++++.+..+
T Consensus 243 ~~~~~~~-~~-i~~-~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 243 EHPAAEG-RY-ICS-SHDATIHDLAKMLREKYP 272 (351)
T ss_pred cCcCcCc-eE-Eec-CCCcCHHHHHHHHHHhCc
Confidence 8765333 44 432 578999999999999876
No 44
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.09 E-value=0.079 Score=42.86 Aligned_cols=85 Identities=12% Similarity=0.005 Sum_probs=61.5
Q ss_pred HHHHHHHHHH----HHCCCCeEEEecchHHH------------------hhh-------c-----------ccccChhHH
Q 046779 30 ATKAKIRRAV----EAERIPYTYVASNFFAG------------------LYL-------S-----------IIFNKEDDI 69 (183)
Q Consensus 30 ~~k~~i~~~l----~~~gi~~T~i~~g~F~~------------------~~~-------~-----------~~~t~~~Di 69 (183)
..|...++.+ ++.+++++++|+++.+. .+. + .++++++|+
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 211 (306)
T PLN02725 132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDL 211 (306)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHH
Confidence 6677777654 45799999999764321 110 0 478999999
Q ss_pred HHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEE
Q 046779 70 GINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRV 116 (183)
Q Consensus 70 a~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~ 116 (183)
++++..++..+. ..+.+++.+ +..+|..|+++.+.+..|.+.++.
T Consensus 212 ~~~~~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~ 256 (306)
T PLN02725 212 ADAVVFLMRRYS-GAEHVNVGS-GDEVTIKELAELVKEVVGFEGELV 256 (306)
T ss_pred HHHHHHHHhccc-cCcceEeCC-CCcccHHHHHHHHHHHhCCCCcee
Confidence 999999997654 234566763 489999999999999998765443
No 45
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=95.92 E-value=0.04 Score=44.90 Aligned_cols=81 Identities=11% Similarity=-0.084 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH--------------hh----h----c----------ccccChhHHHH
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG--------------LY----L----S----------IIFNKEDDIGI 71 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~--------------~~----~----~----------~~~t~~~Dia~ 71 (183)
.-..|...|+++++ .+++++++|+++.+. ++ . + .+|++++|+++
T Consensus 140 Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~ 219 (308)
T PRK11150 140 YGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAA 219 (308)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHH
Confidence 44678888877765 589999999754221 00 0 0 46799999999
Q ss_pred HHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 72 NSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 72 ~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
++..++... .++.+++.+ +..+|+.|+++.+.+..|.
T Consensus 220 a~~~~~~~~--~~~~yni~~-~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 220 VNLWFWENG--VSGIFNCGT-GRAESFQAVADAVLAYHKK 256 (308)
T ss_pred HHHHHHhcC--CCCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence 988888643 246777764 4789999999999999985
No 46
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=95.65 E-value=0.071 Score=42.52 Aligned_cols=107 Identities=9% Similarity=0.044 Sum_probs=70.2
Q ss_pred CCceEeccCCCCCCCCcchhhhhchhhHHH---HHHHHHHHHHCCCCeEEEecchH--------------HHhhhc----
Q 046779 2 FISQRFFPSEFGNDVDRVHAVELARTSFAT---KAKIRRAVEAERIPYTYVASNFF--------------AGLYLS---- 60 (183)
Q Consensus 2 ~~VkrFiPSefg~~~~~~~~~~~~~~~~~~---k~~i~~~l~~~gi~~T~i~~g~F--------------~~~~~~---- 60 (183)
.||-.+.|||=-.-.++. ...+.+++.. +.+-...........++||+|.- ++.+..
T Consensus 129 ~gva~y~pS~s~eY~e~~--~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlG 206 (315)
T KOG3019|consen 129 SGVAVYVPSESQEYSEKI--VHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLG 206 (315)
T ss_pred EeeEEecccccccccccc--ccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCC
Confidence 578899997543322221 1123444432 33332223334577899999843 233322
Q ss_pred -----ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 61 -----IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 61 -----~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
++|+++.|.+..+-.+|.+|.-.+-.=-++ .+..|..|+.+.+..+.+++
T Consensus 207 sG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvA--P~~~~n~Ef~q~lg~aL~Rp 261 (315)
T KOG3019|consen 207 SGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVA--PNPVRNGEFCQQLGSALSRP 261 (315)
T ss_pred CCCeeeeeeehHHHHHHHHHHHhcCCCCceecccC--CCccchHHHHHHHHHHhCCC
Confidence 899999999999999999887443322345 58999999999999999986
No 47
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=95.55 E-value=0.065 Score=48.90 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHH---h-----------hhc---------------------ccccChhH
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAG---L-----------YLS---------------------IIFNKEDD 68 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~---~-----------~~~---------------------~~~t~~~D 68 (183)
....|...|++++. .|++++++|++..+. . +++ .+|++++|
T Consensus 463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~D 542 (660)
T PRK08125 463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD 542 (660)
T ss_pred hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHH
Confidence 34789999988854 589999999886541 0 000 57899999
Q ss_pred HHHHHHHhhcCCc--cCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 69 IGINSIKAVDDPR--TLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 69 ia~~va~~l~~p~--~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
+++++.+++..+. ..++.+++.++...+|.+|+++.+.+..|.+
T Consensus 543 va~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 543 GIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred HHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 9999999987653 2356677763212699999999999999964
No 48
>PLN02778 3,5-epimerase/4-reductase
Probab=94.90 E-value=0.41 Score=39.20 Aligned_cols=89 Identities=15% Similarity=0.118 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecch-----------HHHhhhc--------ccccChhHHHHHHHHhhcCCccCCeEEEE
Q 046779 29 FATKAKIRRAVEAERIPYTYVASNF-----------FAGLYLS--------IIFNKEDDIGINSIKAVDDPRTLNKILYI 89 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~T~i~~g~-----------F~~~~~~--------~~~t~~~Dia~~va~~l~~p~~~~~~~~v 89 (183)
-..|...|.+++... +...+++++ |....+. .+++.++|+++++..++.... +..+++
T Consensus 142 g~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~--~g~yNi 218 (298)
T PLN02778 142 SKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNL--TGIYNF 218 (298)
T ss_pred HHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCC--CCeEEe
Confidence 389999999988632 222333322 2221111 457899999999999886432 357787
Q ss_pred ecCCCccCHHHHHHHHHHHhCCceeEEeCCHH
Q 046779 90 RPRCNIYSFNDLVSLWEEKIGKALDRVYVTEE 121 (183)
Q Consensus 90 ~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~ 121 (183)
. +++.+|.+|+++++.++.|..++...+..+
T Consensus 219 g-s~~~iS~~el~~~i~~~~~~~~~~~~~~i~ 249 (298)
T PLN02778 219 T-NPGVVSHNEILEMYRDYIDPSFTWKNFTLE 249 (298)
T ss_pred C-CCCcccHHHHHHHHHHHhCCCceeccccHH
Confidence 5 458999999999999999986655444444
No 49
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=94.84 E-value=0.29 Score=40.03 Aligned_cols=82 Identities=10% Similarity=0.078 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHHHHHCCCCeEEEecchHHH----hhhc-----------cc--------ccChhHHHHHHH----HhhcC
Q 046779 27 TSFATKAKIRRAVEAERIPYTYVASNFFAG----LYLS-----------II--------FNKEDDIGINSI----KAVDD 79 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~~gi~~T~i~~g~F~~----~~~~-----------~~--------~t~~~Dia~~va----~~l~~ 79 (183)
+.-..|...|++++....+++++|++|.+. ++.+ +. .+...++++.++ .++..
T Consensus 127 ~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~ 206 (299)
T PRK09987 127 VYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNK 206 (299)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhcc
Confidence 344899999999998888999999987762 2222 11 122334544444 34433
Q ss_pred CccCCeEEEEecCCCccCHHHHHHHHHHHhC
Q 046779 80 PRTLNKILYIRPRCNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 80 p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G 110 (183)
++ ....+++.+ ++.+|+.|+++.+.++.+
T Consensus 207 ~~-~~giyni~~-~~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 207 PE-VAGLYHLVA-SGTTTWHDYAALVFEEAR 235 (299)
T ss_pred CC-CCCeEEeeC-CCCccHHHHHHHHHHHHH
Confidence 33 235777764 488999999998877543
No 50
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.76 E-value=0.19 Score=41.62 Aligned_cols=81 Identities=14% Similarity=0.101 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHH-------CCCCeEEEecchHHH-------hhh----------c-------ccccChhHHHHHHHH
Q 046779 27 TSFATKAKIRRAVEA-------ERIPYTYVASNFFAG-------LYL----------S-------IIFNKEDDIGINSIK 75 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~-------~~~----------~-------~~~t~~~Dia~~va~ 75 (183)
+.-..|...+.+++. .|++++++++|+.+. .+. + -.|++++|+++++.+
T Consensus 134 ~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~ 213 (324)
T TIGR03589 134 LYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLK 213 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHH
Confidence 345788888887753 589999999997652 111 1 257999999999999
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhC
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G 110 (183)
++.... .++.+ + |.+..+|..|+++.+.+..+
T Consensus 214 al~~~~-~~~~~-~-~~~~~~sv~el~~~i~~~~~ 245 (324)
T TIGR03589 214 SLERML-GGEIF-V-PKIPSMKITDLAEAMAPECP 245 (324)
T ss_pred HHhhCC-CCCEE-c-cCCCcEEHHHHHHHHHhhCC
Confidence 997542 23433 4 33567999999999998653
No 51
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.68 E-value=0.13 Score=39.70 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHH-CCCCeEEEecchHHHhh-------hc----------ccccChhHHHHHHHHhhcCCccCCeEEEEe
Q 046779 30 ATKAKIRRAVEA-ERIPYTYVASNFFAGLY-------LS----------IIFNKEDDIGINSIKAVDDPRTLNKILYIR 90 (183)
Q Consensus 30 ~~k~~i~~~l~~-~gi~~T~i~~g~F~~~~-------~~----------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~ 90 (183)
....+.-+.||. .++.||++.|..|++=. +. -+.++..|.|-++.--+.+|.+.++.+.+.
T Consensus 132 ~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 132 LAQAEFLDSLRAEKSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred HHHHHHHHHHhhccCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 344444466665 57999999999998531 11 689999999999999999999888887764
No 52
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=94.60 E-value=0.14 Score=40.93 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=59.5
Q ss_pred CCceEecc---CCCCCCCCcchhhhhchhhHHHHHHHHHHHHH-CCCCeEEEecchHHHh--hhc---------------
Q 046779 2 FISQRFFP---SEFGNDVDRVHAVELARTSFATKAKIRRAVEA-ERIPYTYVASNFFAGL--YLS--------------- 60 (183)
Q Consensus 2 ~~VkrFiP---Sefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~-~gi~~T~i~~g~F~~~--~~~--------------- 60 (183)
.|||||+= .+||..+-. +. -.+..|++.|..|.+ .+..-.++|||+.++. +..
T Consensus 152 ~gv~~fvyISa~d~~~~~~i----~r--GY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~ 225 (283)
T KOG4288|consen 152 AGVPRFVYISAHDFGLPPLI----PR--GYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMV 225 (283)
T ss_pred cCCceEEEEEhhhcCCCCcc----ch--hhhccchHHHHHHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHH
Confidence 57888862 356554321 11 257889999877754 7788899999987642 110
Q ss_pred ------------------ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHH
Q 046779 61 ------------------IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEE 107 (183)
Q Consensus 61 ------------------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~ 107 (183)
.+-++++++|.++.+++.||+.. . .+|..||.+...+
T Consensus 226 ~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~-G---------vv~i~eI~~~a~k 280 (283)
T KOG4288|consen 226 LKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK-G---------VVTIEEIKKAAHK 280 (283)
T ss_pred HHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC-c---------eeeHHHHHHHHHH
Confidence 45578899999999999999854 1 3455566555443
No 53
>PLN00198 anthocyanidin reductase; Provisional
Probab=94.48 E-value=0.24 Score=40.93 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHH----CCCCeEEEecchHHHh---------------hh---c---------------ccccChhHHH
Q 046779 28 SFATKAKIRRAVEA----ERIPYTYVASNFFAGL---------------YL---S---------------IIFNKEDDIG 70 (183)
Q Consensus 28 ~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~~---------------~~---~---------------~~~t~~~Dia 70 (183)
....|...|.++++ .+++++++|++..+.- .+ + .+|++++|++
T Consensus 168 Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a 247 (338)
T PLN00198 168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC 247 (338)
T ss_pred hHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence 44678888876654 5899999888764210 00 0 2789999999
Q ss_pred HHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 71 INSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 71 ~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
++...++..+... ..+... +..+|.+|+++.+.+..+.
T Consensus 248 ~a~~~~~~~~~~~-~~~~~~--~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 248 RAHIFLAEKESAS-GRYICC--AANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHhhCcCcC-CcEEEe--cCCCCHHHHHHHHHHHCCC
Confidence 9999999875532 334334 5788999999999988763
No 54
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=94.13 E-value=0.2 Score=40.93 Aligned_cols=95 Identities=5% Similarity=-0.033 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHCCCCeEEEecchHHHh-------hhc----------------ccccChhHHHHHHHHhhcCCccCCeE
Q 046779 30 ATKAKIRRAVEAERIPYTYVASNFFAGL-------YLS----------------IIFNKEDDIGINSIKAVDDPRTLNKI 86 (183)
Q Consensus 30 ~~k~~i~~~l~~~gi~~T~i~~g~F~~~-------~~~----------------~~~t~~~Dia~~va~~l~~p~~~~~~ 86 (183)
...+......+++|....++|.|..+.. +++ ++|++.+|+-+.+--++.+++- ...
T Consensus 139 ~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~l-sGp 217 (297)
T COG1090 139 QDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQL-SGP 217 (297)
T ss_pred HHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCC-CCc
Confidence 4555555556668899999999877642 111 9999999999999999998873 456
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHH
Q 046779 87 LYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNI 127 (183)
Q Consensus 87 ~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~ 127 (183)
++++.| ..++++|+...+.++.+++-... ++.-.++-.+
T Consensus 218 ~N~taP-~PV~~~~F~~al~r~l~RP~~~~-vP~~~~rl~L 256 (297)
T COG1090 218 FNLTAP-NPVRNKEFAHALGRALHRPAILP-VPSFALRLLL 256 (297)
T ss_pred ccccCC-CcCcHHHHHHHHHHHhCCCcccc-CcHHHHHHHh
Confidence 788766 89999999999999999874432 4444444333
No 55
>PRK07825 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.16 Score=40.53 Aligned_cols=92 Identities=10% Similarity=0.049 Sum_probs=60.2
Q ss_pred HHHHHCCCCeEEEecchHHHhhhc-------ccccChhHHHHHHHHhhcCCccC---CeEEEEecCCCccCHHHHHHHHH
Q 046779 37 RAVEAERIPYTYVASNFFAGLYLS-------IIFNKEDDIGINSIKAVDDPRTL---NKILYIRPRCNIYSFNDLVSLWE 106 (183)
Q Consensus 37 ~~l~~~gi~~T~i~~g~F~~~~~~-------~~~t~~~Dia~~va~~l~~p~~~---~~~~~v~~~~~~~T~~ev~~~~~ 106 (183)
..++..|+.++.|+||+....+.. ..+.+.+|+|+.++.++.++... +......-....+....+.+.+.
T Consensus 166 ~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 245 (273)
T PRK07825 166 LELRGTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTVAKPRPEVRVPRALGPLAQAQRLLPRRVREALN 245 (273)
T ss_pred HHhhccCcEEEEEeCCcCcchhhcccccccCCCCCCHHHHHHHHHHHHhCCCCEEeccHHHHHHHHHHHhCcHHHHHHHH
Confidence 335557999999999998655432 56889999999999999876521 11000000013445567777888
Q ss_pred HHhCCceeEEeCCHHHHHHHHH
Q 046779 107 EKIGKALDRVYVTEEQLLKNIQ 128 (183)
Q Consensus 107 ~~~G~~~~~~~~s~~~~~~~~~ 128 (183)
+..|..-.+...+.++-.+.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~ 267 (273)
T PRK07825 246 RLLGGDRVFLDVDTAARAAYER 267 (273)
T ss_pred HHhcccceeechhhHHHHHHHh
Confidence 8888776676666666555444
No 56
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=93.95 E-value=0.32 Score=40.50 Aligned_cols=83 Identities=11% Similarity=-0.028 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHH-----------CCCCeEEEecchHHH-------hhhc--------------------ccccChhHH
Q 046779 28 SFATKAKIRRAVEA-----------ERIPYTYVASNFFAG-------LYLS--------------------IIFNKEDDI 69 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-----------~gi~~T~i~~g~F~~-------~~~~--------------------~~~t~~~Di 69 (183)
.-..|..++.+++. .++++++|+++..+. .+++ .+|++.+|+
T Consensus 152 Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~ 231 (349)
T TIGR02622 152 YSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEP 231 (349)
T ss_pred chhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHH
Confidence 34678888888765 289999999987651 1222 678999999
Q ss_pred HHHHHHhhcCC----ccCCeEEEEecC-CCccCHHHHHHHHHHHhC
Q 046779 70 GINSIKAVDDP----RTLNKILYIRPR-CNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 70 a~~va~~l~~p----~~~~~~~~v~~~-~~~~T~~ev~~~~~~~~G 110 (183)
++++..++... ...++.+++.++ ++..|..|+++.+.+..+
T Consensus 232 a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 232 LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 99988776532 223567888632 368999999997776554
No 57
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.56 E-value=0.42 Score=39.83 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHH----CCCCeEEEecchHHH------------hhh----c-----------------ccccChhHHHH
Q 046779 29 FATKAKIRRAVEA----ERIPYTYVASNFFAG------------LYL----S-----------------IIFNKEDDIGI 71 (183)
Q Consensus 29 ~~~k~~i~~~l~~----~gi~~T~i~~g~F~~------------~~~----~-----------------~~~t~~~Dia~ 71 (183)
-..|...|.+++. .+++.+++|++..+- .++ . .+|++++|+|+
T Consensus 177 ~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~ 256 (353)
T PLN02896 177 VLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICD 256 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHH
Confidence 4688888886654 689999999743321 111 0 16899999999
Q ss_pred HHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 72 NSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 72 ~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
++..++..+... ..+.+. +..+|.+|+++.+.+..+.
T Consensus 257 a~~~~l~~~~~~-~~~~~~--~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 257 AHIFLMEQTKAE-GRYICC--VDSYDMSELINHLSKEYPC 293 (353)
T ss_pred HHHHHHhCCCcC-ccEEec--CCCCCHHHHHHHHHHhCCC
Confidence 999999765432 334444 6789999999999998873
No 58
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.50 E-value=0.36 Score=38.52 Aligned_cols=82 Identities=7% Similarity=0.111 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc------------------ccccChhHHHHHHHHhhcCCcc
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS------------------IIFNKEDDIGINSIKAVDDPRT 82 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~------------------~~~t~~~Dia~~va~~l~~p~~ 82 (183)
....|..++.+++. .++.++.|+||+...-+.. ..+.+.+|+|+++..++.++..
T Consensus 159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 238 (276)
T PRK05875 159 YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAAS 238 (276)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 44678777777664 5789999999976421110 2345789999999999987753
Q ss_pred --CCeEEEEecCCCcc----CHHHHHHHHHHHhC
Q 046779 83 --LNKILYIRPRCNIY----SFNDLVSLWEEKIG 110 (183)
Q Consensus 83 --~~~~~~v~~~~~~~----T~~ev~~~~~~~~G 110 (183)
.++.+.+.| +..+ +..|+++.+-+..|
T Consensus 239 ~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 239 WITGQVINVDG-GHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred CcCCCEEEECC-CeeccCCccHHHHHHHHhhHHH
Confidence 367777764 4666 77777777665544
No 59
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.40 E-value=0.2 Score=40.06 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=54.8
Q ss_pred HHHHHHCCCCeEEEe-cchHH--Hhhhc---------------------------------ccccChhHHHHHHHHhhcC
Q 046779 36 RRAVEAERIPYTYVA-SNFFA--GLYLS---------------------------------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 36 ~~~l~~~gi~~T~i~-~g~F~--~~~~~---------------------------------~~~t~~~Dia~~va~~l~~ 79 (183)
+.|-.+-|-.||.+. |+.|= |||.+ -.|+...|.|+...-+|..
T Consensus 148 ~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~ 227 (315)
T KOG1431|consen 148 QAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE 227 (315)
T ss_pred HHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh
Confidence 556667788887654 44452 55544 4689999999999999986
Q ss_pred CccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeE
Q 046779 80 PRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDR 115 (183)
Q Consensus 80 p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~ 115 (183)
-+.....+--.|-++.+|.+|++++..++.|-.=++
T Consensus 228 Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l 263 (315)
T KOG1431|consen 228 YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKL 263 (315)
T ss_pred hcCccceEeccCccceeEHHHHHHHHHHHhCCCceE
Confidence 653333222232345999999999999997654333
No 60
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=93.35 E-value=0.36 Score=40.34 Aligned_cols=71 Identities=11% Similarity=0.251 Sum_probs=52.7
Q ss_pred HHHHHCCCCeEEEecchHHH----hhhc---------------------ccccChhHHHHHHHHhhcCCccCCeEEEEec
Q 046779 37 RAVEAERIPYTYVASNFFAG----LYLS---------------------IIFNKEDDIGINSIKAVDDPRTLNKILYIRP 91 (183)
Q Consensus 37 ~~l~~~gi~~T~i~~g~F~~----~~~~---------------------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~ 91 (183)
++.++.|++-+.|.|+.-+. -.++ ..|+|++|+|++=..++..|+..+|+ .+.
T Consensus 177 ~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRy-ic~- 254 (327)
T KOG1502|consen 177 EFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKGRY-ICV- 254 (327)
T ss_pred HHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCceE-EEe-
Confidence 45566788887777765431 1111 67899999999999999999976664 445
Q ss_pred CCCccCHHHHHHHHHHHhC
Q 046779 92 RCNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 92 ~~~~~T~~ev~~~~~~~~G 110 (183)
+...++.|+++++.+...
T Consensus 255 -~~~~~~~ei~~~l~~~~P 272 (327)
T KOG1502|consen 255 -GEVVSIKEIADILRELFP 272 (327)
T ss_pred -cCcccHHHHHHHHHHhCC
Confidence 567789999999998754
No 61
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=93.26 E-value=0.59 Score=38.09 Aligned_cols=91 Identities=14% Similarity=0.160 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHH-CC--------CCeEEEecchHHH----hhhc---------------------ccccChhHHHHHH
Q 046779 28 SFATKAKIRRAVEA-ER--------IPYTYVASNFFAG----LYLS---------------------IIFNKEDDIGINS 73 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-~g--------i~~T~i~~g~F~~----~~~~---------------------~~~t~~~Dia~~v 73 (183)
....|...|+++.+ .+ +..+.|||..-+- .+.+ .++++.+|+|.+.
T Consensus 146 Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ah 225 (280)
T PF01073_consen 146 YAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAH 225 (280)
T ss_pred hHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHH
Confidence 35899999999876 23 6788888875431 1111 7899999999988
Q ss_pred HHh---hcCC---c-cCCeEEEEecCCCccC-HHHHHHHHHHHhCCceeE-EeCC
Q 046779 74 IKA---VDDP---R-TLNKILYIRPRCNIYS-FNDLVSLWEEKIGKALDR-VYVT 119 (183)
Q Consensus 74 a~~---l~~p---~-~~~~~~~v~~~~~~~T-~~ev~~~~~~~~G~~~~~-~~~s 119 (183)
..+ |.++ + ..++.+++..+ +.++ +.|+...+-+..|.+... .+++
T Consensus 226 vlA~~~L~~~~~~~~~~G~~y~itd~-~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 226 VLAAQALLEPGKPERVAGQAYFITDG-EPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred HHHHHHhccccccccCCCcEEEEECC-CccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 554 4444 3 45788888854 6777 999999999999987655 4443
No 62
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=92.99 E-value=0.13 Score=39.69 Aligned_cols=63 Identities=19% Similarity=0.165 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHH----CCCCeEEEecchHHHhh---------hc---------------------ccccChhHHHHH
Q 046779 27 TSFATKAKIRRAVEA----ERIPYTYVASNFFAGLY---------LS---------------------IIFNKEDDIGIN 72 (183)
Q Consensus 27 ~~~~~k~~i~~~l~~----~gi~~T~i~~g~F~~~~---------~~---------------------~~~t~~~Dia~~ 72 (183)
+....|...|+++++ .+++++++|++..+.-. ++ .++++.+|+|++
T Consensus 139 ~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 218 (236)
T PF01370_consen 139 PYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA 218 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence 345788888888775 48999999986554222 00 789999999999
Q ss_pred HHHhhcCCccCCeEEEE
Q 046779 73 SIKAVDDPRTLNKILYI 89 (183)
Q Consensus 73 va~~l~~p~~~~~~~~v 89 (183)
+..++.++...++.++|
T Consensus 219 ~~~~~~~~~~~~~~yNi 235 (236)
T PF01370_consen 219 IVAALENPKAAGGIYNI 235 (236)
T ss_dssp HHHHHHHSCTTTEEEEE
T ss_pred HHHHHhCCCCCCCEEEe
Confidence 99999988866777766
No 63
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=92.85 E-value=0.21 Score=41.51 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=42.2
Q ss_pred ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCcee
Q 046779 61 IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALD 114 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~ 114 (183)
.+|++++|+++++..++..+. +..+++.+ ++.+|.+|+++.+.++.|++..
T Consensus 224 rd~i~V~D~a~a~~~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~~~ 274 (343)
T TIGR01472 224 RDWGHAKDYVEAMWLMLQQDK--PDDYVIAT-GETHSVREFVEVSFEYIGKTLN 274 (343)
T ss_pred cCceeHHHHHHHHHHHHhcCC--CccEEecC-CCceeHHHHHHHHHHHcCCCcc
Confidence 688999999999999987653 34677764 5899999999999999997653
No 64
>PRK08263 short chain dehydrogenase; Provisional
Probab=92.41 E-value=0.26 Score=39.51 Aligned_cols=79 Identities=11% Similarity=-0.013 Sum_probs=54.5
Q ss_pred HHHHHHHHHHH-------HHCCCCeEEEecchHHHhhh--------------c-----------ccc-cChhHHHHHHHH
Q 046779 29 FATKAKIRRAV-------EAERIPYTYVASNFFAGLYL--------------S-----------IIF-NKEDDIGINSIK 75 (183)
Q Consensus 29 ~~~k~~i~~~l-------~~~gi~~T~i~~g~F~~~~~--------------~-----------~~~-t~~~Dia~~va~ 75 (183)
...|..++.+. +..|+.++.|+||++...+. . -.+ .+.+|+|+.++.
T Consensus 150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~ 229 (275)
T PRK08263 150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLK 229 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 35666654443 33689999999998753221 0 234 889999999999
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHH
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEK 108 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~ 108 (183)
++..++..++.+...+ .+.++..++.+.+.+-
T Consensus 230 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 230 LVDAENPPLRLFLGSG-VLDLAKADYERRLATW 261 (275)
T ss_pred HHcCCCCCeEEEeCch-HHHHHHHHHHHHHHHH
Confidence 9997775555444442 3688889988888774
No 65
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=91.90 E-value=1.2 Score=36.93 Aligned_cols=89 Identities=15% Similarity=0.002 Sum_probs=66.1
Q ss_pred hchhhHHHHHHHH----HHHHHCCCCeEEEecchH------HHhhhc---------------------ccccChhHHHHH
Q 046779 24 LARTSFATKAKIR----RAVEAERIPYTYVASNFF------AGLYLS---------------------IIFNKEDDIGIN 72 (183)
Q Consensus 24 ~~~~~~~~k~~i~----~~l~~~gi~~T~i~~g~F------~~~~~~---------------------~~~t~~~Dia~~ 72 (183)
|..|..+.|+... .+.+.-|++.++.+|.-= -|=++| -.|..+.|-+++
T Consensus 148 PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~a 227 (340)
T COG1088 148 PSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRA 227 (340)
T ss_pred CCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHH
Confidence 5556666776654 444557999999998631 122222 578999999999
Q ss_pred HHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCcee
Q 046779 73 SIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALD 114 (183)
Q Consensus 73 va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~ 114 (183)
+-.+|..-+ .+++++|.| +...|--||++.+-+..|+...
T Consensus 228 i~~Vl~kg~-~GE~YNIgg-~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 228 IDLVLTKGK-IGETYNIGG-GNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred HHHHHhcCc-CCceEEeCC-CccchHHHHHHHHHHHhCcccc
Confidence 999998655 577788765 5888999999999999998554
No 66
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=91.36 E-value=0.42 Score=39.58 Aligned_cols=49 Identities=4% Similarity=-0.088 Sum_probs=40.5
Q ss_pred ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCc
Q 046779 61 IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKA 112 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~ 112 (183)
.+|++.+|+|++++.++..+. +..+++.+ ++.+|..|+++.+.++.|.+
T Consensus 230 rd~i~v~D~a~a~~~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 230 RDWGFAGDYVEAMWLMLQQEK--PDDYVVAT-EESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred ecceeHHHHHHHHHHHHhcCC--CCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence 578999999999999997543 35577763 58899999999999999964
No 67
>PLN02996 fatty acyl-CoA reductase
Probab=91.30 E-value=0.95 Score=39.96 Aligned_cols=83 Identities=16% Similarity=0.085 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHH--CCCCeEEEecchHH-----------Hhh-------h----c------------ccccChhHHHH
Q 046779 28 SFATKAKIRRAVEA--ERIPYTYVASNFFA-----------GLY-------L----S------------IIFNKEDDIGI 71 (183)
Q Consensus 28 ~~~~k~~i~~~l~~--~gi~~T~i~~g~F~-----------~~~-------~----~------------~~~t~~~Dia~ 71 (183)
....|...|..+++ .+++.+++||+.-. +++ . . .++++++|+++
T Consensus 236 Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~ 315 (491)
T PLN02996 236 YVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVN 315 (491)
T ss_pred hHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHH
Confidence 45789999999977 58999999886542 111 0 0 78899999999
Q ss_pred HHHHhhcCC--c-cCCeEEEEecCC--CccCHHHHHHHHHHHhCC
Q 046779 72 NSIKAVDDP--R-TLNKILYIRPRC--NIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 72 ~va~~l~~p--~-~~~~~~~v~~~~--~~~T~~ev~~~~~~~~G~ 111 (183)
++.+++..+ + ..++.+++. +| ..+|+.|+++.+.+..++
T Consensus 316 a~l~a~~~~~~~~~~~~vYNi~-s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 316 AMIVAMAAHAGGQGSEIIYHVG-SSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred HHHHHHHHhhccCCCCcEEEec-CCCCCcccHHHHHHHHHHHhhh
Confidence 998888653 2 124566765 34 679999999999887654
No 68
>PRK12320 hypothetical protein; Provisional
Probab=90.23 E-value=0.96 Score=41.76 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=54.3
Q ss_pred HHHHHHHHCCCCeEEEecchHHH--------hhhc-----------ccccChhHHHHHHHHhhcCCccCCeEEEEecCCC
Q 046779 34 KIRRAVEAERIPYTYVASNFFAG--------LYLS-----------IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCN 94 (183)
Q Consensus 34 ~i~~~l~~~gi~~T~i~~g~F~~--------~~~~-----------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~ 94 (183)
..|+++++.++++|++|+++-+. .++. +.+++++|+++++..++..+. +..+++.| ++
T Consensus 112 ~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~-~~ 188 (699)
T PRK12320 112 QAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLAT-PD 188 (699)
T ss_pred HHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeC-CC
Confidence 46777888889999998876432 1111 667899999999999987543 34788875 48
Q ss_pred ccCHHHHHHHHHHH
Q 046779 95 IYSFNDLVSLWEEK 108 (183)
Q Consensus 95 ~~T~~ev~~~~~~~ 108 (183)
.+|++|+++++...
T Consensus 189 ~~Si~el~~~i~~~ 202 (699)
T PRK12320 189 TTNVVTAWRLLRSV 202 (699)
T ss_pred eeEHHHHHHHHHHh
Confidence 99999999998665
No 69
>PRK06482 short chain dehydrogenase; Provisional
Probab=90.20 E-value=1.6 Score=34.80 Aligned_cols=81 Identities=20% Similarity=0.048 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc----------------------------ccccChhHHHHH
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS----------------------------IIFNKEDDIGIN 72 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~----------------------------~~~t~~~Dia~~ 72 (183)
.-..|..++.+++. .|++++.++||.+...+.+ ..+.+.+|++++
T Consensus 148 Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a 227 (276)
T PRK06482 148 YHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQA 227 (276)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHH
Confidence 34677777655543 5899999999987432211 123678999999
Q ss_pred HHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhC
Q 046779 73 SIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIG 110 (183)
Q Consensus 73 va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G 110 (183)
+..++..+.. +..+. .|.++..+.+|+++.+.+..+
T Consensus 228 ~~~~~~~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 228 MIASADQTPA-PRRLT-LGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHcCCCC-CeEEe-cChHHHHHHHHHHHHHHHHHH
Confidence 8888875543 33344 444566777777666655543
No 70
>PRK12828 short chain dehydrogenase; Provisional
Probab=89.93 E-value=0.79 Score=35.32 Aligned_cols=51 Identities=8% Similarity=-0.034 Sum_probs=38.6
Q ss_pred HCCCCeEEEecchHHHhhh----c----ccccChhHHHHHHHHhhcCCc--cCCeEEEEec
Q 046779 41 AERIPYTYVASNFFAGLYL----S----IIFNKEDDIGINSIKAVDDPR--TLNKILYIRP 91 (183)
Q Consensus 41 ~~gi~~T~i~~g~F~~~~~----~----~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~ 91 (183)
+.++.+..|++|++..... + ..+++.+|+|+++..++.++. ..++.+.+.|
T Consensus 174 ~~~i~~~~i~pg~v~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g 234 (239)
T PRK12828 174 DRGITVNAVLPSIIDTPPNRADMPDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG 234 (239)
T ss_pred hcCeEEEEEecCcccCcchhhcCCchhhhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence 3589999999999965322 1 457889999999999998753 3467777774
No 71
>PRK09291 short chain dehydrogenase; Provisional
Probab=89.67 E-value=0.4 Score=37.64 Aligned_cols=91 Identities=9% Similarity=-0.001 Sum_probs=47.5
Q ss_pred HHHHHHHHHH-------HHHCCCCeEEEecchHHHhhhc--c-cccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCH
Q 046779 29 FATKAKIRRA-------VEAERIPYTYVASNFFAGLYLS--I-IFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSF 98 (183)
Q Consensus 29 ~~~k~~i~~~-------l~~~gi~~T~i~~g~F~~~~~~--~-~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~ 98 (183)
...|..++.+ ++..|+.++.|+||+|+.++.. . .+-...+-. ...+..++ .... ...++.
T Consensus 146 ~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~--~~~~~~ 215 (257)
T PRK09291 146 CASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPA---RNFTDPED-----LAFP--LEQFDP 215 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchh---hHHHhhhh-----hhcc--ccCCCH
Confidence 3566666543 4457999999999999876532 0 000000000 00011011 0111 235678
Q ss_pred HHHHHHHHHH-hCCceeEEeCCHHHHHHHHHH
Q 046779 99 NDLVSLWEEK-IGKALDRVYVTEEQLLKNIQE 129 (183)
Q Consensus 99 ~ev~~~~~~~-~G~~~~~~~~s~~~~~~~~~~ 129 (183)
+++++.+-++ .+...++..++..++.+.+..
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 247 (257)
T PRK09291 216 QEMIDAMVEVIPADTGLFRNLLPAAIEDMVKD 247 (257)
T ss_pred HHHHHHHHHHhcCCCCCcccCCCHHHHHHHHH
Confidence 8887766654 344455666677776665543
No 72
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=89.38 E-value=3.7 Score=40.58 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHH---CCCCeEEEecchHHHh----------hh-------------c-----ccccChhHHHHHHHHh
Q 046779 28 SFATKAKIRRAVEA---ERIPYTYVASNFFAGL----------YL-------------S-----IIFNKEDDIGINSIKA 76 (183)
Q Consensus 28 ~~~~k~~i~~~l~~---~gi~~T~i~~g~F~~~----------~~-------------~-----~~~t~~~Dia~~va~~ 76 (183)
....|...|..+.+ .|++.+++|+|.-+.- ++ + ..+++++|++++++.+
T Consensus 1150 Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~ 1229 (1389)
T TIGR03443 1150 YGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAA 1229 (1389)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHH
Confidence 34688888888765 5899999998754310 00 0 6789999999999999
Q ss_pred hcCCcc--CCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHH
Q 046779 77 VDDPRT--LNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQ 128 (183)
Q Consensus 77 l~~p~~--~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~ 128 (183)
+..+.. ....+.+.+ +..+++.++++.+.+. |.+++. ++.++....+.
T Consensus 1230 ~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~-g~~~~~--~~~~~w~~~l~ 1279 (1389)
T TIGR03443 1230 ALNPPKESELAVAHVTG-HPRIRFNDFLGTLKTY-GYDVEI--VDYVHWRKSLE 1279 (1389)
T ss_pred HhCCcccCCCCEEEeCC-CCCCcHHHHHHHHHHh-CCCCCc--cCHHHHHHHHH
Confidence 876642 224556653 4688999999999764 766554 55666555443
No 73
>PRK07326 short chain dehydrogenase; Provisional
Probab=89.09 E-value=2.3 Score=32.80 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=39.6
Q ss_pred HHCCCCeEEEecchHHHhhhc-------ccccChhHHHHHHHHhhcCCc-cCCeEEEEe
Q 046779 40 EAERIPYTYVASNFFAGLYLS-------IIFNKEDDIGINSIKAVDDPR-TLNKILYIR 90 (183)
Q Consensus 40 ~~~gi~~T~i~~g~F~~~~~~-------~~~t~~~Dia~~va~~l~~p~-~~~~~~~v~ 90 (183)
+..|++++.|+||++..++.. ...++.+|+|+++..++..|. .+...+.+.
T Consensus 172 ~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~ 230 (237)
T PRK07326 172 RQYGIKVSTIMPGSVATHFNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVR 230 (237)
T ss_pred cccCcEEEEEeeccccCcccccccchhhhccCCHHHHHHHHHHHHhCCccccccceEEe
Confidence 336899999999999877643 124789999999999998776 556666665
No 74
>PRK07074 short chain dehydrogenase; Provisional
Probab=88.84 E-value=1.4 Score=34.67 Aligned_cols=78 Identities=13% Similarity=-0.026 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh------------------c-ccccChhHHHHHHHHhhcCCc-
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL------------------S-IIFNKEDDIGINSIKAVDDPR- 81 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~------------------~-~~~t~~~Dia~~va~~l~~p~- 81 (183)
...|..++.+.+. .|+....++||++..... + ..+++.+|+++++..++.++.
T Consensus 149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 228 (257)
T PRK07074 149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAAR 228 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhc
Confidence 3556666555544 478899999998753321 0 457899999999999997643
Q ss_pred c-CCeEEEEecCCCccCHHHHHHHHHH
Q 046779 82 T-LNKILYIRPRCNIYSFNDLVSLWEE 107 (183)
Q Consensus 82 ~-~~~~~~v~~~~~~~T~~ev~~~~~~ 107 (183)
. .++.+.+.| |...+.+||++.+++
T Consensus 229 ~~~g~~~~~~~-g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 229 AITGVCLPVDG-GLTAGNREMARTLTL 254 (257)
T ss_pred CcCCcEEEeCC-CcCcCChhhhhhhcc
Confidence 3 356666664 588889999988765
No 75
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.08 E-value=1.2 Score=34.38 Aligned_cols=53 Identities=11% Similarity=0.003 Sum_probs=39.6
Q ss_pred HHHCCCCeEEEecchHHHhhhc----------------ccccChhHHHHHHHHhhcCCc--cCCeEEEEec
Q 046779 39 VEAERIPYTYVASNFFAGLYLS----------------IIFNKEDDIGINSIKAVDDPR--TLNKILYIRP 91 (183)
Q Consensus 39 l~~~gi~~T~i~~g~F~~~~~~----------------~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~ 91 (183)
++..++.++.|+||++...... ..+++.+|++++++.++.++. ..++.+.+.|
T Consensus 174 ~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~ 244 (249)
T PRK12825 174 LAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG 244 (249)
T ss_pred HhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 3446999999999999764321 236788999999999997654 3467888774
No 76
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=86.78 E-value=5.1 Score=36.61 Aligned_cols=92 Identities=15% Similarity=0.120 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecc-----------hHHHhhhc--------ccccChhHHHHHHHHhhcCCccCCeEEEE
Q 046779 29 FATKAKIRRAVEAERIPYTYVASN-----------FFAGLYLS--------IIFNKEDDIGINSIKAVDDPRTLNKILYI 89 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~T~i~~g-----------~F~~~~~~--------~~~t~~~Dia~~va~~l~~p~~~~~~~~v 89 (183)
-..|...|.++++.. ++.+++.. .|....+. .+.+..+|+..++..++.. + .+..+++
T Consensus 513 g~sK~~~E~~~~~~~-~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~-~-~~giyni 589 (668)
T PLN02260 513 SKTKAMVEELLREYD-NVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR-N-LRGIWNF 589 (668)
T ss_pred hHHHHHHHHHHHhhh-hheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHh-C-CCceEEe
Confidence 488999999998742 22222222 22222221 1233344444444666542 2 2468888
Q ss_pred ecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHH
Q 046779 90 RPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLL 124 (183)
Q Consensus 90 ~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~ 124 (183)
+++ ..+|+.|+++.+.+..|..+++..++.+++.
T Consensus 590 ~~~-~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~ 623 (668)
T PLN02260 590 TNP-GVVSHNEILEMYKDYIDPGFKWSNFTLEEQA 623 (668)
T ss_pred cCC-CcCcHHHHHHHHHHhcCCcccccccCHHHhh
Confidence 854 6899999999999888644445666666653
No 77
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=86.14 E-value=4.6 Score=33.42 Aligned_cols=87 Identities=16% Similarity=0.066 Sum_probs=65.3
Q ss_pred hhchhhHHHHHHHHHHHHH----CCCCeEEEecchHH------Hhhhc---------------------ccccChhHHHH
Q 046779 23 ELARTSFATKAKIRRAVEA----ERIPYTYVASNFFA------GLYLS---------------------IIFNKEDDIGI 71 (183)
Q Consensus 23 ~~~~~~~~~k~~i~~~l~~----~gi~~T~i~~g~F~------~~~~~---------------------~~~t~~~Dia~ 71 (183)
.|..|..+.|.+.|..+++ -|++++++|-|--+ +=.+| -++..+.|+.+
T Consensus 152 nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e 231 (331)
T KOG0747|consen 152 NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE 231 (331)
T ss_pred CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence 3667788999999999887 58999988865432 11122 67899999999
Q ss_pred HHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCC
Q 046779 72 NSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGK 111 (183)
Q Consensus 72 ~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~ 111 (183)
+.-+|+.- ...++.++|.. .+..+..|+++.+.+..++
T Consensus 232 a~~~v~~K-g~~geIYNIgt-d~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 232 AFKAVLEK-GELGEIYNIGT-DDEMRVIDLAKDICELFEK 269 (331)
T ss_pred HHHHHHhc-CCccceeeccC-cchhhHHHHHHHHHHHHHH
Confidence 99999875 55677777753 5888888888877776554
No 78
>PRK07806 short chain dehydrogenase; Provisional
Probab=84.91 E-value=3.1 Score=32.37 Aligned_cols=64 Identities=17% Similarity=0.208 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh--------c----------ccccChhHHHHHHHHhhcCCcc
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL--------S----------IIFNKEDDIGINSIKAVDDPRT 82 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~--------~----------~~~t~~~Dia~~va~~l~~p~~ 82 (183)
....|..++.+++. .++..+.|++|+....+. + -.+.+.+|+|+.++.++..+..
T Consensus 153 Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 232 (248)
T PRK07806 153 VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVP 232 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcccc
Confidence 35789999988776 578899998875532111 1 2678999999999999986654
Q ss_pred CCeEEEEec
Q 046779 83 LNKILYIRP 91 (183)
Q Consensus 83 ~~~~~~v~~ 91 (183)
.++.+.+.|
T Consensus 233 ~g~~~~i~~ 241 (248)
T PRK07806 233 SGHIEYVGG 241 (248)
T ss_pred CccEEEecC
Confidence 567777764
No 79
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=82.89 E-value=2.6 Score=32.64 Aligned_cols=62 Identities=16% Similarity=0.077 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhh----------------c-ccccChhHHHHHHHHhhcCCc--c
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYL----------------S-IIFNKEDDIGINSIKAVDDPR--T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~----------------~-~~~t~~~Dia~~va~~l~~p~--~ 82 (183)
...|..++.+++ ..+++.+.++||++..... + -.+++.+|+|.++..++..+. .
T Consensus 157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 236 (251)
T PRK12826 157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYI 236 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 355655544443 3589999999999854211 1 246899999999999887654 2
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 237 ~g~~~~~~ 244 (251)
T PRK12826 237 TGQTLPVD 244 (251)
T ss_pred CCcEEEEC
Confidence 46777877
No 80
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=81.95 E-value=3.1 Score=32.15 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=42.4
Q ss_pred HHHHHHHHHH-------HHHCCCCeEEEecchHHHhhhc-----------ccccChhHHHHHHHHhhcCCc--cCCeEEE
Q 046779 29 FATKAKIRRA-------VEAERIPYTYVASNFFAGLYLS-----------IIFNKEDDIGINSIKAVDDPR--TLNKILY 88 (183)
Q Consensus 29 ~~~k~~i~~~-------l~~~gi~~T~i~~g~F~~~~~~-----------~~~t~~~Dia~~va~~l~~p~--~~~~~~~ 88 (183)
...|..++.. ++..|++++.|+||+++..+.+ ..+++.+|+|++++.++.++. ..++.+.
T Consensus 151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~ 230 (238)
T PRK05786 151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIP 230 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHHhcccccCccCCEEE
Confidence 4566555433 3335899999999998754321 236789999999999998654 2455556
Q ss_pred Ee
Q 046779 89 IR 90 (183)
Q Consensus 89 v~ 90 (183)
+.
T Consensus 231 ~~ 232 (238)
T PRK05786 231 VD 232 (238)
T ss_pred EC
Confidence 55
No 81
>PRK06180 short chain dehydrogenase; Provisional
Probab=80.03 E-value=5.6 Score=31.74 Aligned_cols=54 Identities=15% Similarity=0.050 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-------------------c----------ccccChhHHHH
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-------------------S----------IIFNKEDDIGI 71 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-------------------~----------~~~t~~~Dia~ 71 (183)
....|..++.+.+. .|++++.|+||++...+. + ..+.+.+|+|+
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 229 (277)
T PRK06180 150 YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQ 229 (277)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHH
Confidence 34667766655443 589999999998742210 0 23567889999
Q ss_pred HHHHhhcCCc
Q 046779 72 NSIKAVDDPR 81 (183)
Q Consensus 72 ~va~~l~~p~ 81 (183)
++..++..+.
T Consensus 230 ~~~~~l~~~~ 239 (277)
T PRK06180 230 AILAAVESDE 239 (277)
T ss_pred HHHHHHcCCC
Confidence 9999888665
No 82
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.92 E-value=5.9 Score=30.77 Aligned_cols=64 Identities=9% Similarity=0.005 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc------------------ccccChhHHHHHHHHhhcCCc-
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS------------------IIFNKEDDIGINSIKAVDDPR- 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~------------------~~~t~~~Dia~~va~~l~~p~- 81 (183)
....|..++.+++. .++.++.|+||++...... -.+.+.+|+|+.++.++.++.
T Consensus 154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 233 (250)
T PRK08063 154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEAD 233 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 44678888777654 6899999999987643210 136788999999999998764
Q ss_pred -cCCeEEEEec
Q 046779 82 -TLNKILYIRP 91 (183)
Q Consensus 82 -~~~~~~~v~~ 91 (183)
..++.+.+.|
T Consensus 234 ~~~g~~~~~~g 244 (250)
T PRK08063 234 MIRGQTIIVDG 244 (250)
T ss_pred CccCCEEEECC
Confidence 2366777663
No 83
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=79.74 E-value=6.3 Score=30.63 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhh------------------------c----ccccChhHHHHHH
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYL------------------------S----IIFNKEDDIGINS 73 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~------------------------~----~~~t~~~Dia~~v 73 (183)
...|..++.+.+ ..++..+.|+||+++.... + ..+++.+|+|+++
T Consensus 151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 230 (255)
T TIGR01963 151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETA 230 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHH
Confidence 355655554443 2489999999999753211 0 3579999999999
Q ss_pred HHhhcCCc--cCCeEEEEe
Q 046779 74 IKAVDDPR--TLNKILYIR 90 (183)
Q Consensus 74 a~~l~~p~--~~~~~~~v~ 90 (183)
..++.++. ..++.+.+.
T Consensus 231 ~~~~~~~~~~~~g~~~~~~ 249 (255)
T TIGR01963 231 LFLASDAAAGITGQAIVLD 249 (255)
T ss_pred HHHcCccccCccceEEEEc
Confidence 99998753 235666665
No 84
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=77.02 E-value=5.1 Score=30.82 Aligned_cols=53 Identities=9% Similarity=0.110 Sum_probs=36.7
Q ss_pred HHHCCCCeEEEecchHHHhhhc----------------ccccChhHHHHHHHHhhcCCc--cCCeEEEEec
Q 046779 39 VEAERIPYTYVASNFFAGLYLS----------------IIFNKEDDIGINSIKAVDDPR--TLNKILYIRP 91 (183)
Q Consensus 39 l~~~gi~~T~i~~g~F~~~~~~----------------~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~ 91 (183)
++..++.++.|+||+++..... ..+++.+|+|++++.++.... ..++.+.+.|
T Consensus 172 ~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 242 (246)
T PRK05653 172 LASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNG 242 (246)
T ss_pred HhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 4446899999999987432110 345778999999999997533 3456777763
No 85
>PRK07060 short chain dehydrogenase; Provisional
Probab=76.74 E-value=10 Score=29.31 Aligned_cols=63 Identities=17% Similarity=0.095 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----c--------------ccccChhHHHHHHHHhhcCCc-
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----S--------------IIFNKEDDIGINSIKAVDDPR- 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----~--------------~~~t~~~Dia~~va~~l~~p~- 81 (183)
....|..++.+++. .++..+.++||+....+. . -.+.+.+|+|++++.++.++.
T Consensus 150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 229 (245)
T PRK07060 150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS 229 (245)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence 44677777765543 479999999998753321 0 346899999999999998765
Q ss_pred c-CCeEEEEe
Q 046779 82 T-LNKILYIR 90 (183)
Q Consensus 82 ~-~~~~~~v~ 90 (183)
. .++.+.+.
T Consensus 230 ~~~G~~~~~~ 239 (245)
T PRK07060 230 MVSGVSLPVD 239 (245)
T ss_pred CccCcEEeEC
Confidence 3 35666665
No 86
>PRK08219 short chain dehydrogenase; Provisional
Probab=75.71 E-value=12 Score=28.35 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHH-----CC-CCeEEEecchHHHhhh------------cccccChhHHHHHHHHhhcCCc
Q 046779 29 FATKAKIRRAVEA-----ER-IPYTYVASNFFAGLYL------------SIIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 29 ~~~k~~i~~~l~~-----~g-i~~T~i~~g~F~~~~~------------~~~~t~~~Dia~~va~~l~~p~ 81 (183)
...|..++.+++. .+ +.++.|+||+...-.. +..+++.+|+|+++..++.++.
T Consensus 143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 143 AASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 4566666655443 34 8999999998643211 1447899999999999998765
No 87
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=75.54 E-value=23 Score=28.72 Aligned_cols=55 Identities=7% Similarity=0.071 Sum_probs=44.1
Q ss_pred ccccChhHHHHHHHHhhcCCc--cCCeEEEEecCCCccCHHHHHHHHHHHh-CCceeEEe
Q 046779 61 IIFNKEDDIGINSIKAVDDPR--TLNKILYIRPRCNIYSFNDLVSLWEEKI-GKALDRVY 117 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~~~~~~~T~~ev~~~~~~~~-G~~~~~~~ 117 (183)
+++....|.-+.+...+..|. ...++++++ +...|.+|+++.+.++. |-.+.|..
T Consensus 251 lpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt--~~sftpee~~~~~~~~~p~~~i~y~~ 308 (366)
T KOG2774|consen 251 LPMMYDTDCMASVIQLLAADSQSLKRRTYNVT--GFSFTPEEIADAIRRVMPGFEIDYDI 308 (366)
T ss_pred CceeehHHHHHHHHHHHhCCHHHhhhheeeec--eeccCHHHHHHHHHhhCCCceeeccc
Confidence 788888999888888887665 345788999 89999999999999976 44555543
No 88
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=75.03 E-value=4.8 Score=31.15 Aligned_cols=42 Identities=10% Similarity=-0.012 Sum_probs=32.6
Q ss_pred HHCCCCeEEEecchHHHhhhc---------ccccChhHHHHHHHHhhcCCc
Q 046779 40 EAERIPYTYVASNFFAGLYLS---------IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 40 ~~~gi~~T~i~~g~F~~~~~~---------~~~t~~~Dia~~va~~l~~p~ 81 (183)
+..|+.++.|+||++..-+.. ..+++.+|+|+++..++..+.
T Consensus 175 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~ 225 (239)
T PRK07666 175 RKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLKLNK 225 (239)
T ss_pred hccCcEEEEEecCcccCcchhhccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 446899999999988754311 456789999999999998653
No 89
>PF07485 DUF1529: Domain of Unknown Function (DUF1259); InterPro: IPR011094 This family is the lppY/lpqO homologue family. They are related to 'probable conserved lipoproteins' LppY and LpqO from Mycobacterium bovis.
Probab=73.72 E-value=6 Score=28.40 Aligned_cols=49 Identities=10% Similarity=0.064 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHCCCCeEEEecchHHHhh----hc-ccccChhHHHHHHHHhhc
Q 046779 30 ATKAKIRRAVEAERIPYTYVASNFFAGLY----LS-IIFNKEDDIGINSIKAVD 78 (183)
Q Consensus 30 ~~k~~i~~~l~~~gi~~T~i~~g~F~~~~----~~-~~~t~~~Dia~~va~~l~ 78 (183)
+.-..+.+.|++.||..|.|.|.|+.+.- +. -+.-+..+.|+-+.++|.
T Consensus 68 ~EV~pvi~aL~~~GI~vtAlHNH~l~e~Prl~ymH~~~~gdp~~lA~~vr~Ald 121 (123)
T PF07485_consen 68 DEVNPVISALRKNGIEVTALHNHWLFEQPRLFYMHIWGVGDPAKLARKVRAALD 121 (123)
T ss_pred HHHHHHHHHHHHCCceEEEEecccccCCCCEEEEEEEecCCHHHHHHHHHHHHh
Confidence 45567889999999999999999999852 22 556678888888888875
No 90
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=73.63 E-value=11 Score=29.27 Aligned_cols=49 Identities=4% Similarity=0.061 Sum_probs=34.7
Q ss_pred CCCCeEEEecchHHHhhh------------------------c----ccccChhHHHHHHHHhhcCCc-c-CCeEEEEe
Q 046779 42 ERIPYTYVASNFFAGLYL------------------------S----IIFNKEDDIGINSIKAVDDPR-T-LNKILYIR 90 (183)
Q Consensus 42 ~gi~~T~i~~g~F~~~~~------------------------~----~~~t~~~Dia~~va~~l~~p~-~-~~~~~~v~ 90 (183)
.++.++.++||+...-+. + -.+++.+|+|+++..++.++. . .++.+.+.
T Consensus 174 ~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 252 (258)
T PRK12429 174 HGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVD 252 (258)
T ss_pred cCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeC
Confidence 589999999998753111 0 357899999999999987654 2 34655554
No 91
>PRK08017 oxidoreductase; Provisional
Probab=73.26 E-value=14 Score=28.68 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=35.6
Q ss_pred hHHHHHHHHHH-------HHHCCCCeEEEecchHHHhhhc------------------ccccChhHHHHHHHHhhcCCc
Q 046779 28 SFATKAKIRRA-------VEAERIPYTYVASNFFAGLYLS------------------IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 28 ~~~~k~~i~~~-------l~~~gi~~T~i~~g~F~~~~~~------------------~~~t~~~Dia~~va~~l~~p~ 81 (183)
....|..++.+ +...++.++.++||+++..+.. -.+.+.+|+++.+..++..+.
T Consensus 146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 34567666654 3447899999999987643321 124677788888877776554
No 92
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=73.13 E-value=18 Score=28.13 Aligned_cols=62 Identities=11% Similarity=0.181 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----c------------------------ccccChhHHHHHH
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----S------------------------IIFNKEDDIGINS 73 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----~------------------------~~~t~~~Dia~~v 73 (183)
...|..++.+++. .++..+.|+||+...-.. + ..+++.+|+|+++
T Consensus 158 ~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~ 237 (262)
T PRK13394 158 VTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTV 237 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 3556666555442 589999999996542110 0 3588999999999
Q ss_pred HHhhcCCc-cC-CeEEEEe
Q 046779 74 IKAVDDPR-TL-NKILYIR 90 (183)
Q Consensus 74 a~~l~~p~-~~-~~~~~v~ 90 (183)
..++..+. .. ++.+.+.
T Consensus 238 ~~l~~~~~~~~~g~~~~~~ 256 (262)
T PRK13394 238 LFLSSFPSAALTGQSFVVS 256 (262)
T ss_pred HHHcCccccCCcCCEEeeC
Confidence 98887654 22 3555554
No 93
>PRK12829 short chain dehydrogenase; Provisional
Probab=72.07 E-value=14 Score=28.83 Aligned_cols=64 Identities=9% Similarity=0.050 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHH----Hhhhc-----------------------ccccChhHHHHHHH
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFA----GLYLS-----------------------IIFNKEDDIGINSI 74 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~----~~~~~-----------------------~~~t~~~Dia~~va 74 (183)
...|..++.+++. .++.++.|+||+.+ +...+ -.+++.+|+|+++.
T Consensus 161 ~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 240 (264)
T PRK12829 161 AASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATAL 240 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3566666655544 58999999999873 11110 14799999999998
Q ss_pred HhhcCCc--cCCeEEEEecC
Q 046779 75 KAVDDPR--TLNKILYIRPR 92 (183)
Q Consensus 75 ~~l~~p~--~~~~~~~v~~~ 92 (183)
.++.+.. ..++.+.+.|+
T Consensus 241 ~l~~~~~~~~~g~~~~i~~g 260 (264)
T PRK12829 241 FLASPAARYITGQAISVDGN 260 (264)
T ss_pred HHcCccccCccCcEEEeCCC
Confidence 8886432 33567777643
No 94
>PRK05650 short chain dehydrogenase; Provisional
Probab=71.65 E-value=5.6 Score=31.54 Aligned_cols=39 Identities=21% Similarity=0.143 Sum_probs=29.8
Q ss_pred CCCCeEEEecchHHHhhhc------------------ccccChhHHHHHHHHhhcCC
Q 046779 42 ERIPYTYVASNFFAGLYLS------------------IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 42 ~gi~~T~i~~g~F~~~~~~------------------~~~t~~~Dia~~va~~l~~p 80 (183)
.|+.++.|+||++...+.. -..++.+|+|+.++.++.+.
T Consensus 170 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 170 DEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred cCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 6899999999999765421 23568888888888888754
No 95
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=71.32 E-value=26 Score=29.18 Aligned_cols=84 Identities=12% Similarity=0.074 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHH----HCCCCeEEEec----chHHHh--------hhc-----------------ccccChhHHHHHHHH
Q 046779 29 FATKAKIRRAVE----AERIPYTYVAS----NFFAGL--------YLS-----------------IIFNKEDDIGINSIK 75 (183)
Q Consensus 29 ~~~k~~i~~~l~----~~gi~~T~i~~----g~F~~~--------~~~-----------------~~~t~~~Dia~~va~ 75 (183)
...|+.+|.... +.||+.++.|. |.+|.+ |.. -+|+-+.|.-+.+.+
T Consensus 171 degKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~ 250 (350)
T KOG1429|consen 171 DEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLR 250 (350)
T ss_pred hHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHH
Confidence 357887777654 47999888765 333332 211 677888888888888
Q ss_pred hhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeE
Q 046779 76 AVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDR 115 (183)
Q Consensus 76 ~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~ 115 (183)
....+...+ +++- ..+..|..|+|+++.+..|.+-..
T Consensus 251 Lm~s~~~~p--vNiG-np~e~Tm~elAemv~~~~~~~s~i 287 (350)
T KOG1429|consen 251 LMESDYRGP--VNIG-NPGEFTMLELAEMVKELIGPVSEI 287 (350)
T ss_pred HhcCCCcCC--cccC-CccceeHHHHHHHHHHHcCCCcce
Confidence 887766444 5654 347999999999999988654433
No 96
>PRK06914 short chain dehydrogenase; Provisional
Probab=71.06 E-value=14 Score=29.38 Aligned_cols=30 Identities=10% Similarity=0.055 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHh
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGL 57 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~ 57 (183)
....|..++.++++ .|+++++++||++...
T Consensus 153 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 153 YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189 (280)
T ss_pred hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence 34667777766554 4899999999988654
No 97
>PRK09186 flagellin modification protein A; Provisional
Probab=68.05 E-value=7.9 Score=30.16 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhh----hc--------ccccChhHHHHHHHHhhcCCc-cC-CeEE
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLY----LS--------IIFNKEDDIGINSIKAVDDPR-TL-NKIL 87 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~----~~--------~~~t~~~Dia~~va~~l~~p~-~~-~~~~ 87 (183)
...|..++.+.+ ..++.++.|+||+..+.. .. ..+.+.+|+|+++..++.++. .. ++.+
T Consensus 169 ~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 248 (256)
T PRK09186 169 AAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNI 248 (256)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceE
Confidence 356776666543 257999999999764321 11 457899999999999998664 33 4555
Q ss_pred EEe
Q 046779 88 YIR 90 (183)
Q Consensus 88 ~v~ 90 (183)
.+.
T Consensus 249 ~~~ 251 (256)
T PRK09186 249 IVD 251 (256)
T ss_pred Eec
Confidence 554
No 98
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=67.62 E-value=16 Score=28.28 Aligned_cols=64 Identities=9% Similarity=0.053 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHH------CCCCeEEEecchHHHhh----h---c-------------ccccChhHHHHHHHHhhcCCc
Q 046779 28 SFATKAKIRRAVEA------ERIPYTYVASNFFAGLY----L---S-------------IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~------~gi~~T~i~~g~F~~~~----~---~-------------~~~t~~~Dia~~va~~l~~p~ 81 (183)
.-..|..++.+.+. .++....+.||+...-. . . -.+++.+|+|+++..++..+.
T Consensus 154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 233 (252)
T PRK06077 154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIES 233 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCccc
Confidence 34677776666554 36888999998773211 0 0 246899999999999998666
Q ss_pred cCCeEEEEec
Q 046779 82 TLNKILYIRP 91 (183)
Q Consensus 82 ~~~~~~~v~~ 91 (183)
..++.+.+.+
T Consensus 234 ~~g~~~~i~~ 243 (252)
T PRK06077 234 ITGQVFVLDS 243 (252)
T ss_pred cCCCeEEecC
Confidence 5567777763
No 99
>PRK09134 short chain dehydrogenase; Provisional
Probab=67.51 E-value=20 Score=28.06 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHH------CCCCeEEEecchHHHh-------hhc-------ccccChhHHHHHHHHhhcCCccCCeEE
Q 046779 28 SFATKAKIRRAVEA------ERIPYTYVASNFFAGL-------YLS-------IIFNKEDDIGINSIKAVDDPRTLNKIL 87 (183)
Q Consensus 28 ~~~~k~~i~~~l~~------~gi~~T~i~~g~F~~~-------~~~-------~~~t~~~Dia~~va~~l~~p~~~~~~~ 87 (183)
....|..++.+.+. .++..+.|+||+.+.. +.. -...+.+|+|+++..++..+...++.+
T Consensus 159 Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~g~~~ 238 (258)
T PRK09134 159 YTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPSVTGQMI 238 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCCEE
Confidence 45778766655554 2488899999976421 111 224789999999999998766556777
Q ss_pred EEecCCCccCHH
Q 046779 88 YIRPRCNIYSFN 99 (183)
Q Consensus 88 ~v~~~~~~~T~~ 99 (183)
.+.|+ ..++++
T Consensus 239 ~i~gg-~~~~~~ 249 (258)
T PRK09134 239 AVDGG-QHLAWL 249 (258)
T ss_pred EECCC-eecccc
Confidence 77643 555443
No 100
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=67.49 E-value=11 Score=31.80 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=43.7
Q ss_pred ccccChhHHHHHHHHhhcCCcc-CCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeC
Q 046779 61 IIFNKEDDIGINSIKAVDDPRT-LNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYV 118 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p~~-~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~ 118 (183)
-.+++..|.|+...++|..... .+..++-.|-+.-.|..||+.++++++|+++++.-+
T Consensus 234 rdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v 292 (343)
T KOG1371|consen 234 RDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVV 292 (343)
T ss_pred ecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcccc
Confidence 3467788999999999987763 332344444467788999999999999998877644
No 101
>PRK06179 short chain dehydrogenase; Provisional
Probab=67.20 E-value=30 Score=27.23 Aligned_cols=30 Identities=17% Similarity=0.134 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhh
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLY 58 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~ 58 (183)
...|..++.+.+ +.|+.++.|+||++...+
T Consensus 146 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 146 AASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 466777665544 369999999999976543
No 102
>PRK08628 short chain dehydrogenase; Provisional
Probab=66.42 E-value=9 Score=29.98 Aligned_cols=71 Identities=8% Similarity=0.109 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhh----h-----------------cc--cccChhHHHHHHHHhhc
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLY----L-----------------SI--IFNKEDDIGINSIKAVD 78 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~----~-----------------~~--~~t~~~Dia~~va~~l~ 78 (183)
...|..++.+.+. .++..+.|+||++..-+ + +. .+.+.+|+|++++.++.
T Consensus 154 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (258)
T PRK08628 154 AAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS 233 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhC
Confidence 3567777666554 47999999999663211 0 01 36789999999999998
Q ss_pred CCc--cCCeEEEEecCCCccCHHHH
Q 046779 79 DPR--TLNKILYIRPRCNIYSFNDL 101 (183)
Q Consensus 79 ~p~--~~~~~~~v~~~~~~~T~~ev 101 (183)
++. ..++.+.+. +.....+|+
T Consensus 234 ~~~~~~~g~~~~~~--gg~~~~~~~ 256 (258)
T PRK08628 234 ERSSHTTGQWLFVD--GGYVHLDRA 256 (258)
T ss_pred hhhccccCceEEec--CCccccccc
Confidence 764 335667776 345555554
No 103
>PLN02503 fatty acyl-CoA reductase 2
Probab=65.56 E-value=36 Score=31.10 Aligned_cols=80 Identities=18% Similarity=0.127 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHH--CCCCeEEEecch-----------HHHhh---hc--------------------ccccChhHHHHH
Q 046779 29 FATKAKIRRAVEA--ERIPYTYVASNF-----------FAGLY---LS--------------------IIFNKEDDIGIN 72 (183)
Q Consensus 29 ~~~k~~i~~~l~~--~gi~~T~i~~g~-----------F~~~~---~~--------------------~~~t~~~Dia~~ 72 (183)
.-.|...|+.+++ .++|.++|||+. |.++. .| ++++.++.++.+
T Consensus 351 t~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna 430 (605)
T PLN02503 351 VFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNA 430 (605)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHH
Confidence 4688999999987 489999999986 34441 12 677888888888
Q ss_pred HHHhhc-CCc---cCCeEEEEecCC--CccCHHHHHHHHHHHh
Q 046779 73 SIKAVD-DPR---TLNKILYIRPRC--NIYSFNDLVSLWEEKI 109 (183)
Q Consensus 73 va~~l~-~p~---~~~~~~~v~~~~--~~~T~~ev~~~~~~~~ 109 (183)
+.++.. ++. ...+.++++ .+ ..+|+.|+.+.+.+..
T Consensus 431 ~i~a~a~~~~~~~~~~~vYn~t-s~~~nP~t~~~~~~~~~~~~ 472 (605)
T PLN02503 431 TLAAMAKHGGAAKPEINVYQIA-SSVVNPLVFQDLARLLYEHY 472 (605)
T ss_pred HHHHHHhhhcccCCCCCEEEeC-CCCCCCeEHHHHHHHHHHHH
Confidence 877742 121 234677776 24 7899999999888643
No 104
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=65.36 E-value=39 Score=26.96 Aligned_cols=65 Identities=18% Similarity=0.229 Sum_probs=43.8
Q ss_pred ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHcCC
Q 046779 61 IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEASY 132 (183)
Q Consensus 61 ~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~~~ 132 (183)
+.-++.+.+.+++.++ .+|+ ...+.+. .=.+.--++++.+|+..|+++ ..-...-+...+...|.
T Consensus 162 ia~i~p~~i~~~~~~~-~~~~--aDAifis--CTnLrt~~vi~~lE~~lGkPV--lsSNqat~W~~Lr~~G~ 226 (239)
T TIGR02990 162 MARISPDCIVEAALAA-FDPD--ADALFLS--CTALRAATCAQRIEQAIGKPV--VTSNQATAWRCLRLCGD 226 (239)
T ss_pred eeecCHHHHHHHHHHh-cCCC--CCEEEEe--CCCchhHHHHHHHHHHHCCCE--EEHHHHHHHHHHHHcCC
Confidence 5557788888877666 3454 2567777 568888999999999999985 22233334555555443
No 105
>PRK07904 short chain dehydrogenase; Provisional
Probab=65.27 E-value=10 Score=29.87 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=32.8
Q ss_pred HHHHHCCCCeEEEecchHHHhhhc-----ccccChhHHHHHHHHhhcCCc
Q 046779 37 RAVEAERIPYTYVASNFFAGLYLS-----IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 37 ~~l~~~gi~~T~i~~g~F~~~~~~-----~~~t~~~Dia~~va~~l~~p~ 81 (183)
..++..++.++.++||+...-+.. ....+.+|+|+.+...+.+++
T Consensus 175 ~el~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 175 EALREYGVRVLVVRPGQVRTRMSAHAKEAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred HHHhhcCCEEEEEeeCceecchhccCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 335557999999999998654322 224678999999998887544
No 106
>COG4588 AcfC Accessory colonization factor AcfC, contains ABC-type periplasmic domain [General function prediction only]
Probab=63.58 E-value=22 Score=28.01 Aligned_cols=53 Identities=11% Similarity=0.091 Sum_probs=40.6
Q ss_pred hcCCccCCeEEEEecCC-CccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHH
Q 046779 77 VDDPRTLNKILYIRPRC-NIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQE 129 (183)
Q Consensus 77 l~~p~~~~~~~~v~~~~-~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~ 129 (183)
|.-+...+..+.+.||| -..-..+++..+++.+|+++.+..-+.....+...+
T Consensus 13 La~s~~~~adinlYGpGGPhtaL~~vA~~~~ektg~kVnvt~GPq~tW~~kAkk 66 (252)
T COG4588 13 LAFSSAANADINLYGPGGPHTALKDVAKKYEEKTGIKVNVTAGPQATWNEKAKK 66 (252)
T ss_pred HHhhhhhcceEEEecCCCCcHHHHHHHHHHHHHhCeEEEEecCCcchhhhhhhc
Confidence 33344567778887775 455689999999999999999999988777665544
No 107
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=62.68 E-value=34 Score=26.60 Aligned_cols=54 Identities=17% Similarity=0.163 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHh-h----h------------cccccChhHHHHHHHHhhcCCcc
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGL-Y----L------------SIIFNKEDDIGINSIKAVDDPRT 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~-~----~------------~~~~t~~~Dia~~va~~l~~p~~ 82 (183)
...|..++.+.+. .+|..+.|+||.+..- + + .....+.+|+|+++..++.+|+.
T Consensus 148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence 4566666555443 5788999999987411 0 1 02457899999999999988873
No 108
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=62.64 E-value=14 Score=29.71 Aligned_cols=61 Identities=23% Similarity=0.223 Sum_probs=43.4
Q ss_pred HHHHHHHHH---HHH----CCCCeEEEecchHHHhhhc-----------------ccccChhHHHHHHHHhhcCCccCC-
Q 046779 30 ATKAKIRRA---VEA----ERIPYTYVASNFFAGLYLS-----------------IIFNKEDDIGINSIKAVDDPRTLN- 84 (183)
Q Consensus 30 ~~k~~i~~~---l~~----~gi~~T~i~~g~F~~~~~~-----------------~~~t~~~Dia~~va~~l~~p~~~~- 84 (183)
..|..+... ||+ .+|..|.|.||.=-.-.+. ....+.+|||+.|+-+++.|++.|
T Consensus 155 ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vnI 234 (246)
T COG4221 155 ATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVNI 234 (246)
T ss_pred hhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcccc
Confidence 566665544 333 6899999999987432111 678899999999999999999765
Q ss_pred eEEEEe
Q 046779 85 KILYIR 90 (183)
Q Consensus 85 ~~~~v~ 90 (183)
..+.+.
T Consensus 235 ~ei~i~ 240 (246)
T COG4221 235 NEIEIM 240 (246)
T ss_pred ceEEEe
Confidence 344443
No 109
>PRK07577 short chain dehydrogenase; Provisional
Probab=61.86 E-value=25 Score=26.87 Aligned_cols=63 Identities=13% Similarity=0.090 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHH-------HCCCCeEEEecchHHHhhhc----------------c---cccChhHHHHHHHHhhcCCc
Q 046779 28 SFATKAKIRRAVE-------AERIPYTYVASNFFAGLYLS----------------I---IFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~~----------------~---~~t~~~Dia~~va~~l~~p~ 81 (183)
....|..++.+.+ +.|+.++.|+||++...... . .+.+.+|+|.++..++.++.
T Consensus 139 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 218 (234)
T PRK07577 139 YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDA 218 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 3456766655544 35899999999998643211 1 13578999999999987664
Q ss_pred -c-CCeEEEEe
Q 046779 82 -T-LNKILYIR 90 (183)
Q Consensus 82 -~-~~~~~~v~ 90 (183)
. .+..+.+.
T Consensus 219 ~~~~g~~~~~~ 229 (234)
T PRK07577 219 GFITGQVLGVD 229 (234)
T ss_pred CCccceEEEec
Confidence 2 24555555
No 110
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=61.25 E-value=21 Score=27.34 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=39.8
Q ss_pred HHHHHHHHHHH-------HHCCCCeEEEecchHHHhhh----c------------ccccChhHHHHHHHHhhcCCc--cC
Q 046779 29 FATKAKIRRAV-------EAERIPYTYVASNFFAGLYL----S------------IIFNKEDDIGINSIKAVDDPR--TL 83 (183)
Q Consensus 29 ~~~k~~i~~~l-------~~~gi~~T~i~~g~F~~~~~----~------------~~~t~~~Dia~~va~~l~~p~--~~ 83 (183)
...|..++.++ +..++.++.++||++..... + -.+.+..|+|+++...+.++. ..
T Consensus 156 ~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 235 (248)
T PRK05557 156 AASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYIT 235 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence 34565554333 34689999999999742211 1 235789999999988776533 23
Q ss_pred CeEEEEe
Q 046779 84 NKILYIR 90 (183)
Q Consensus 84 ~~~~~v~ 90 (183)
++.+.+.
T Consensus 236 g~~~~i~ 242 (248)
T PRK05557 236 GQTLHVN 242 (248)
T ss_pred ccEEEec
Confidence 4667776
No 111
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=61.07 E-value=20 Score=27.61 Aligned_cols=62 Identities=18% Similarity=0.143 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc--------------------ccccChhHHHHHHHHhhcCCc
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS--------------------IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~--------------------~~~t~~~Dia~~va~~l~~p~ 81 (183)
...|..++.+.+. .++.++.++||++...+.. ..+.+.+|+|+++..++.++.
T Consensus 155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 234 (251)
T PRK07231 155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEA 234 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence 3556555544433 4899999999977422110 346789999999999997654
Q ss_pred -cC-CeEEEEe
Q 046779 82 -TL-NKILYIR 90 (183)
Q Consensus 82 -~~-~~~~~v~ 90 (183)
.. +..+.+.
T Consensus 235 ~~~~g~~~~~~ 245 (251)
T PRK07231 235 SWITGVTLVVD 245 (251)
T ss_pred cCCCCCeEEEC
Confidence 22 4555655
No 112
>PRK09135 pteridine reductase; Provisional
Probab=60.84 E-value=40 Score=25.83 Aligned_cols=64 Identities=16% Similarity=0.089 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHH------CCCCeEEEecchHHH-----hhhc------------ccccChhHHHHHHHHhhcCCc-cC
Q 046779 28 SFATKAKIRRAVEA------ERIPYTYVASNFFAG-----LYLS------------IIFNKEDDIGINSIKAVDDPR-TL 83 (183)
Q Consensus 28 ~~~~k~~i~~~l~~------~gi~~T~i~~g~F~~-----~~~~------------~~~t~~~Dia~~va~~l~~p~-~~ 83 (183)
.-..|..++.+++. .++..+.++||+..- .+.. ..+.+.+|+|+++..++.+.. ..
T Consensus 156 Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~ 235 (249)
T PRK09135 156 YCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADASFIT 235 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccccc
Confidence 45788888877765 268899999987641 1111 234578999999976665443 34
Q ss_pred CeEEEEec
Q 046779 84 NKILYIRP 91 (183)
Q Consensus 84 ~~~~~v~~ 91 (183)
++.+.+.+
T Consensus 236 g~~~~i~~ 243 (249)
T PRK09135 236 GQILAVDG 243 (249)
T ss_pred CcEEEECC
Confidence 56666663
No 113
>PRK07775 short chain dehydrogenase; Provisional
Probab=60.42 E-value=17 Score=28.99 Aligned_cols=54 Identities=17% Similarity=0.075 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhh----hc------------------ccccChhHHHHHHHHhhc
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLY----LS------------------IIFNKEDDIGINSIKAVD 78 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~----~~------------------~~~t~~~Dia~~va~~l~ 78 (183)
....|..++..++. .|+..++|+||+++.-. .+ ..+++.+|+|+++..++.
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~ 238 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAE 238 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhc
Confidence 34677777766654 38999999999863110 00 247788999999988887
Q ss_pred CCc
Q 046779 79 DPR 81 (183)
Q Consensus 79 ~p~ 81 (183)
.+.
T Consensus 239 ~~~ 241 (274)
T PRK07775 239 TPR 241 (274)
T ss_pred CCC
Confidence 664
No 114
>PRK07454 short chain dehydrogenase; Provisional
Probab=60.18 E-value=16 Score=28.28 Aligned_cols=53 Identities=8% Similarity=0.053 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhhc----------ccccChhHHHHHHHHhhcCCc
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYLS----------IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~~----------~~~t~~~Dia~~va~~l~~p~ 81 (183)
...|..++.+.+ ..|++++.|+||++..-... ....+.+|+|+++..++.+|+
T Consensus 156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccccccccCCCHHHHHHHHHHHHcCCc
Confidence 355666655443 35899999999997532111 235789999999999998875
No 115
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=59.59 E-value=51 Score=25.40 Aligned_cols=63 Identities=8% Similarity=-0.028 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhh----hc-------------ccccChhHHHHHHHHhhcCCc-c
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLY----LS-------------IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~----~~-------------~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
....|..++.+.+. .|+....|.||+...-. .+ -.+.+.+|+|++++.++.++. .
T Consensus 159 Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 238 (253)
T PRK08642 159 YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARA 238 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcC
Confidence 44678888777766 46888899999874211 11 247889999999999998754 3
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.+..+.+.
T Consensus 239 ~~G~~~~vd 247 (253)
T PRK08642 239 VTGQNLVVD 247 (253)
T ss_pred ccCCEEEeC
Confidence 34566665
No 116
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=58.74 E-value=42 Score=26.07 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----c--------------ccccChhHHHHHHHHhhcCCc-
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----S--------------IIFNKEDDIGINSIKAVDDPR- 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----~--------------~~~t~~~Dia~~va~~l~~p~- 81 (183)
....|..++.+.+. .|+..+.|+||++..-+. . -.+.+.+|||+++..++.++.
T Consensus 159 y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 238 (255)
T PRK07523 159 YTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASS 238 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 34667776665443 589999999998742211 0 236778999999999887644
Q ss_pred c-CCeEEEEec
Q 046779 82 T-LNKILYIRP 91 (183)
Q Consensus 82 ~-~~~~~~v~~ 91 (183)
. .++.+.+.|
T Consensus 239 ~~~G~~i~~~g 249 (255)
T PRK07523 239 FVNGHVLYVDG 249 (255)
T ss_pred CccCcEEEECC
Confidence 2 245666653
No 117
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=58.47 E-value=27 Score=26.75 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=36.1
Q ss_pred HHHCCCCeEEEecchHHHhhhc----------------ccccChhHHHHHHHHhhcCCc-c-CCeEEEEe
Q 046779 39 VEAERIPYTYVASNFFAGLYLS----------------IIFNKEDDIGINSIKAVDDPR-T-LNKILYIR 90 (183)
Q Consensus 39 l~~~gi~~T~i~~g~F~~~~~~----------------~~~t~~~Dia~~va~~l~~p~-~-~~~~~~v~ 90 (183)
+...|+.++.++||+....... ..+.+.+|+|++++.++..+. . .++.+.+-
T Consensus 173 ~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 242 (247)
T PRK05565 173 LAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVD 242 (247)
T ss_pred HHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEec
Confidence 3447999999999997432111 345788999999999997654 2 34556554
No 118
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=57.19 E-value=35 Score=26.57 Aligned_cols=63 Identities=13% Similarity=0.045 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhh--------------h------------c-ccccChhHHHHHHH
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLY--------------L------------S-IIFNKEDDIGINSI 74 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~--------------~------------~-~~~t~~~Dia~~va 74 (183)
...|..++.+.+. .|+..+.|+||+...-. . + -.+++.+|||++++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 233 (257)
T PRK07067 154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMAL 233 (257)
T ss_pred hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHH
Confidence 3567776666543 58899999999752110 0 0 24678999999999
Q ss_pred HhhcCCc--cCCeEEEEec
Q 046779 75 KAVDDPR--TLNKILYIRP 91 (183)
Q Consensus 75 ~~l~~p~--~~~~~~~v~~ 91 (183)
.++.++. ..++.+.+.|
T Consensus 234 ~l~s~~~~~~~g~~~~v~g 252 (257)
T PRK07067 234 FLASADADYIVAQTYNVDG 252 (257)
T ss_pred HHhCcccccccCcEEeecC
Confidence 9998754 2357777763
No 119
>PRK07041 short chain dehydrogenase; Provisional
Probab=55.21 E-value=59 Score=24.71 Aligned_cols=64 Identities=8% Similarity=0.034 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHH-----CCCCeEEEecchHHHhh----hc----------------ccccChhHHHHHHHHhhcCCcc
Q 046779 28 SFATKAKIRRAVEA-----ERIPYTYVASNFFAGLY----LS----------------IIFNKEDDIGINSIKAVDDPRT 82 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-----~gi~~T~i~~g~F~~~~----~~----------------~~~t~~~Dia~~va~~l~~p~~ 82 (183)
....|..++.+.+. .++..+.|.||+...-+ .+ -.+.+.+|+|+++..++.++..
T Consensus 137 Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 216 (230)
T PRK07041 137 QGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFT 216 (230)
T ss_pred HHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCc
Confidence 34778888877766 34667888888742111 00 1236789999999998886544
Q ss_pred CCeEEEEec
Q 046779 83 LNKILYIRP 91 (183)
Q Consensus 83 ~~~~~~v~~ 91 (183)
.++.+.+.|
T Consensus 217 ~G~~~~v~g 225 (230)
T PRK07041 217 TGSTVLVDG 225 (230)
T ss_pred CCcEEEeCC
Confidence 456777763
No 120
>PRK12744 short chain dehydrogenase; Provisional
Probab=54.08 E-value=39 Score=26.39 Aligned_cols=62 Identities=18% Similarity=0.097 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-c------------------c---cccChhHHHHHHHHhhcC
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-S------------------I---IFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-~------------------~---~~t~~~Dia~~va~~l~~ 79 (183)
...|..++.+.+. .|+..+.|+||++..-+. + + .+.+.+|||.++..++.+
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (257)
T PRK12744 160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD 239 (257)
T ss_pred hhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence 4667777766655 379999999999953211 0 1 467889999999988875
Q ss_pred Ccc-CCeEEEEe
Q 046779 80 PRT-LNKILYIR 90 (183)
Q Consensus 80 p~~-~~~~~~v~ 90 (183)
... .++.+.+.
T Consensus 240 ~~~~~g~~~~~~ 251 (257)
T PRK12744 240 GWWITGQTILIN 251 (257)
T ss_pred cceeecceEeec
Confidence 333 24556655
No 121
>PRK12939 short chain dehydrogenase; Provisional
Probab=51.90 E-value=32 Score=26.47 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----------------c-ccccChhHHHHHHHHhhcCCc--c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----------------S-IIFNKEDDIGINSIKAVDDPR--T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----------------~-~~~t~~~Dia~~va~~l~~p~--~ 82 (183)
...|..++.+.+. .++..+.|+||+...... + ..+.+.+|+|+++..++.++. .
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 236 (250)
T PRK12939 157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFV 236 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCc
Confidence 3566666655543 578899999998632111 0 346889999999999997653 3
Q ss_pred CCeEEEEec
Q 046779 83 LNKILYIRP 91 (183)
Q Consensus 83 ~~~~~~v~~ 91 (183)
.++.+.+.|
T Consensus 237 ~G~~i~~~g 245 (250)
T PRK12939 237 TGQLLPVNG 245 (250)
T ss_pred cCcEEEECC
Confidence 567777763
No 122
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=51.46 E-value=63 Score=24.80 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=33.8
Q ss_pred CCCCeEEEecchHHHhhhc----------------------ccccChhHHHHHHHHhhcCCc-c-CCeEEEEe
Q 046779 42 ERIPYTYVASNFFAGLYLS----------------------IIFNKEDDIGINSIKAVDDPR-T-LNKILYIR 90 (183)
Q Consensus 42 ~gi~~T~i~~g~F~~~~~~----------------------~~~t~~~Dia~~va~~l~~p~-~-~~~~~~v~ 90 (183)
.++.++.++||++..-+.. -.+.+.+|+|+++...+.++. . .++.+.+.
T Consensus 173 ~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 245 (250)
T TIGR03206 173 HGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVS 245 (250)
T ss_pred hCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeC
Confidence 4899999999987532110 135678999999999887653 2 34666665
No 123
>CHL00160 rpl9 ribosomal protein L9; Provisional
Probab=51.23 E-value=17 Score=27.01 Aligned_cols=28 Identities=7% Similarity=0.143 Sum_probs=23.9
Q ss_pred ccCHHHHHHHHHHHhCCceeEEeCCHHH
Q 046779 95 IYSFNDLVSLWEEKIGKALDRVYVTEEQ 122 (183)
Q Consensus 95 ~~T~~ev~~~~~~~~G~~~~~~~~s~~~ 122 (183)
++|-.+|++.+++.+|.++....+..++
T Consensus 98 SVt~~dIa~~l~~~~g~~idk~~I~l~~ 125 (153)
T CHL00160 98 SVTEKEISQIIKNKTNIDLEKQNIELPE 125 (153)
T ss_pred ccCHHHHHHHHHHhhCCccccceeehhh
Confidence 7899999999999999988877776654
No 124
>PRK07774 short chain dehydrogenase; Provisional
Probab=49.76 E-value=52 Score=25.33 Aligned_cols=63 Identities=10% Similarity=0.009 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----c-------------ccccChhHHHHHHHHhhcCCc--c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----S-------------IIFNKEDDIGINSIKAVDDPR--T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----~-------------~~~t~~~Dia~~va~~l~~p~--~ 82 (183)
...|..++.+.+. .++..+.++||....... + ..+.+.+|+|+.+..++.++. .
T Consensus 156 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~ 235 (250)
T PRK07774 156 GLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWI 235 (250)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCc
Confidence 4567766666554 478899999997753221 1 225678999999998887653 2
Q ss_pred CCeEEEEec
Q 046779 83 LNKILYIRP 91 (183)
Q Consensus 83 ~~~~~~v~~ 91 (183)
.++.+.+.|
T Consensus 236 ~g~~~~v~~ 244 (250)
T PRK07774 236 TGQIFNVDG 244 (250)
T ss_pred CCCEEEECC
Confidence 456666663
No 125
>PRK06182 short chain dehydrogenase; Validated
Probab=49.41 E-value=32 Score=27.15 Aligned_cols=29 Identities=14% Similarity=-0.042 Sum_probs=20.7
Q ss_pred HHHHHHHHHHH-------HHCCCCeEEEecchHHHh
Q 046779 29 FATKAKIRRAV-------EAERIPYTYVASNFFAGL 57 (183)
Q Consensus 29 ~~~k~~i~~~l-------~~~gi~~T~i~~g~F~~~ 57 (183)
...|..++.+. +..|+.++.|+||++...
T Consensus 147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTE 182 (273)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccc
Confidence 35677666543 346899999999988643
No 126
>PRK06841 short chain dehydrogenase; Provisional
Probab=45.98 E-value=51 Score=25.53 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----------------c-ccccChhHHHHHHHHhhcCCc-c-
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----------------S-IIFNKEDDIGINSIKAVDDPR-T- 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----------------~-~~~t~~~Dia~~va~~l~~p~-~- 82 (183)
...|..++.+.+. .|+..+.|.||+....+. + -.+.+.+|+|+.+..++.++. .
T Consensus 162 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 241 (255)
T PRK06841 162 CASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMI 241 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 3566665544433 589999999998743221 0 236789999999999998764 3
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 242 ~G~~i~~d 249 (255)
T PRK06841 242 TGENLVID 249 (255)
T ss_pred cCCEEEEC
Confidence 35666665
No 127
>PRK12746 short chain dehydrogenase; Provisional
Probab=45.32 E-value=57 Score=25.23 Aligned_cols=62 Identities=10% Similarity=0.037 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhh----hc--------------ccccChhHHHHHHHHhhcCCc--
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLY----LS--------------IIFNKEDDIGINSIKAVDDPR-- 81 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~----~~--------------~~~t~~~Dia~~va~~l~~p~-- 81 (183)
-..|..++.+.+ ..++.++.++||+...-+ .. -.+++.+|||+++..++.++.
T Consensus 161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 240 (254)
T PRK12746 161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRW 240 (254)
T ss_pred HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCC
Confidence 355666655432 358999999999853211 00 234689999999988887653
Q ss_pred cCCeEEEEe
Q 046779 82 TLNKILYIR 90 (183)
Q Consensus 82 ~~~~~~~v~ 90 (183)
..++.+.+.
T Consensus 241 ~~g~~~~i~ 249 (254)
T PRK12746 241 VTGQIIDVS 249 (254)
T ss_pred cCCCEEEeC
Confidence 235566665
No 128
>PRK06924 short chain dehydrogenase; Provisional
Probab=45.20 E-value=83 Score=24.22 Aligned_cols=54 Identities=4% Similarity=-0.049 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHH---------CCCCeEEEecchHHHhhhc----------------------ccccChhHHHHHHHHh
Q 046779 28 SFATKAKIRRAVEA---------ERIPYTYVASNFFAGLYLS----------------------IIFNKEDDIGINSIKA 76 (183)
Q Consensus 28 ~~~~k~~i~~~l~~---------~gi~~T~i~~g~F~~~~~~----------------------~~~t~~~Dia~~va~~ 76 (183)
....|..++...+. .++....|.||++...+.. -.+.+.+|+|+.++.+
T Consensus 154 Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 233 (251)
T PRK06924 154 YCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNL 233 (251)
T ss_pred HhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHH
Confidence 34677777766543 3688888999987432211 1256788888888888
Q ss_pred hcCCc
Q 046779 77 VDDPR 81 (183)
Q Consensus 77 l~~p~ 81 (183)
+.++.
T Consensus 234 ~~~~~ 238 (251)
T PRK06924 234 LETED 238 (251)
T ss_pred Hhccc
Confidence 87644
No 129
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=45.12 E-value=1.3e+02 Score=23.00 Aligned_cols=63 Identities=16% Similarity=0.179 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh---c-------------ccccChhHHHHHHHHhhcCCc-cC
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL---S-------------IIFNKEDDIGINSIKAVDDPR-TL 83 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~---~-------------~~~t~~~Dia~~va~~l~~p~-~~ 83 (183)
....|..++.+.+. .++..+.++||+...-+. + -.+.+.+|+|+.++.++.... ..
T Consensus 156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~~~~~ 235 (247)
T PRK12935 156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGAYIT 235 (247)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcccCcc
Confidence 34566655444332 589999999998742211 1 346889999999988886543 23
Q ss_pred CeEEEEe
Q 046779 84 NKILYIR 90 (183)
Q Consensus 84 ~~~~~v~ 90 (183)
++.+.+.
T Consensus 236 g~~~~i~ 242 (247)
T PRK12935 236 GQQLNIN 242 (247)
T ss_pred CCEEEeC
Confidence 4666665
No 130
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=44.95 E-value=52 Score=25.18 Aligned_cols=50 Identities=6% Similarity=0.094 Sum_probs=34.2
Q ss_pred HCCCCeEEEecchHHHhhhc----------------ccccChhHHHHHHHHhhcCCc-c-CCeEEEEe
Q 046779 41 AERIPYTYVASNFFAGLYLS----------------IIFNKEDDIGINSIKAVDDPR-T-LNKILYIR 90 (183)
Q Consensus 41 ~~gi~~T~i~~g~F~~~~~~----------------~~~t~~~Dia~~va~~l~~p~-~-~~~~~~v~ 90 (183)
..++..+.|+||++..-+.. ..+.+.+|+|+++..++.++. . .++.+.+.
T Consensus 172 ~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~ 239 (245)
T PRK12936 172 TRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVN 239 (245)
T ss_pred HhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEEC
Confidence 36899999999988432211 235678999999988887654 2 34566665
No 131
>PRK12827 short chain dehydrogenase; Provisional
Probab=43.41 E-value=57 Score=24.93 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHH-------HCCCCeEEEecchHHHhh----------h---c-ccccChhHHHHHHHHhhcCCc-cC-C
Q 046779 28 SFATKAKIRRAVE-------AERIPYTYVASNFFAGLY----------L---S-IIFNKEDDIGINSIKAVDDPR-TL-N 84 (183)
Q Consensus 28 ~~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~----------~---~-~~~t~~~Dia~~va~~l~~p~-~~-~ 84 (183)
....|..++.+.+ ..++.++.|+||+...-+ . + -.+.+..|+|+++..++.+.. .. +
T Consensus 160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g 239 (249)
T PRK12827 160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTG 239 (249)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccC
Confidence 3456655544433 358999999999963211 1 1 234588999999988887654 22 4
Q ss_pred eEEEEe
Q 046779 85 KILYIR 90 (183)
Q Consensus 85 ~~~~v~ 90 (183)
+.+.+.
T Consensus 240 ~~~~~~ 245 (249)
T PRK12827 240 QVIPVD 245 (249)
T ss_pred cEEEeC
Confidence 555554
No 132
>PRK12937 short chain dehydrogenase; Provisional
Probab=43.37 E-value=84 Score=24.00 Aligned_cols=63 Identities=16% Similarity=0.112 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
....|..++.+++. .++..+.++||+....+. + -.+.+.+|+|+++..++.++. .
T Consensus 153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 232 (245)
T PRK12937 153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAW 232 (245)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccC
Confidence 34677777766654 578899999997632210 0 234688999999988887654 3
Q ss_pred C-CeEEEEe
Q 046779 83 L-NKILYIR 90 (183)
Q Consensus 83 ~-~~~~~v~ 90 (183)
. ++.+.+.
T Consensus 233 ~~g~~~~~~ 241 (245)
T PRK12937 233 VNGQVLRVN 241 (245)
T ss_pred ccccEEEeC
Confidence 3 4555554
No 133
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=42.95 E-value=70 Score=24.25 Aligned_cols=50 Identities=14% Similarity=0.158 Sum_probs=33.4
Q ss_pred HCCCCeEEEecchHHHhhh---c-------------ccccChhHHHHHHHHhhcCCc--cCCeEEEEe
Q 046779 41 AERIPYTYVASNFFAGLYL---S-------------IIFNKEDDIGINSIKAVDDPR--TLNKILYIR 90 (183)
Q Consensus 41 ~~gi~~T~i~~g~F~~~~~---~-------------~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~ 90 (183)
..|+.++.++||+...... + ..+.+.+|+|+++..++.++. ..++.+.+.
T Consensus 168 ~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01830 168 SRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVD 235 (239)
T ss_pred hcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeC
Confidence 4689999999998732111 1 235688999999988886543 234555554
No 134
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=42.91 E-value=52 Score=25.08 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=34.3
Q ss_pred HCCCCeEEEecchHHHhhh----c------------ccccChhHHHHHHHHhhcCCc--cCCeEEEEe
Q 046779 41 AERIPYTYVASNFFAGLYL----S------------IIFNKEDDIGINSIKAVDDPR--TLNKILYIR 90 (183)
Q Consensus 41 ~~gi~~T~i~~g~F~~~~~----~------------~~~t~~~Dia~~va~~l~~p~--~~~~~~~v~ 90 (183)
..++..+.++||+...... + --+.+..|+|+++..++.++. ..++.+.+.
T Consensus 170 ~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~ 237 (242)
T TIGR01829 170 TKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN 237 (242)
T ss_pred hhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 3689999999999764321 1 234678899999887777654 335667766
No 135
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=42.81 E-value=77 Score=24.36 Aligned_cols=62 Identities=16% Similarity=0.126 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----c--------------ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----S--------------IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----~--------------~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .|+..+.|+||+...... + -.+.+.+|+|+++..++.++. .
T Consensus 154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~ 233 (248)
T TIGR01832 154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDY 233 (248)
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 4567777666554 379999999998742211 0 246889999999999998654 2
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+-
T Consensus 234 ~~G~~i~~d 242 (248)
T TIGR01832 234 VNGYTLAVD 242 (248)
T ss_pred cCCcEEEeC
Confidence 34555555
No 136
>PRK05876 short chain dehydrogenase; Provisional
Probab=42.80 E-value=97 Score=24.66 Aligned_cols=62 Identities=13% Similarity=0.018 Sum_probs=35.9
Q ss_pred HCCCCeEEEecchHHHhhhc-------------------------ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCc
Q 046779 41 AERIPYTYVASNFFAGLYLS-------------------------IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNI 95 (183)
Q Consensus 41 ~~gi~~T~i~~g~F~~~~~~-------------------------~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~ 95 (183)
..||..+.|+||+.-.-+.. ..+.+.+|+|+.+..++... +.+.+. ..
T Consensus 176 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~----~~~~~~---~~ 248 (275)
T PRK05876 176 ADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN----RLYVLP---HA 248 (275)
T ss_pred hcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC----CeEEec---Ch
Confidence 36899999999976422110 13567778888777777532 222222 23
Q ss_pred cCHHHHHHHHHHHh
Q 046779 96 YSFNDLVSLWEEKI 109 (183)
Q Consensus 96 ~T~~ev~~~~~~~~ 109 (183)
.+..++.....++.
T Consensus 249 ~~~~~~~~~~~~~~ 262 (275)
T PRK05876 249 ASRASIRRRFERID 262 (275)
T ss_pred hhHHHHHHHHHHHH
Confidence 45555555555543
No 137
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=42.29 E-value=63 Score=24.70 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=39.4
Q ss_pred HHHHHHHHHHH-------HCCCCeEEEecchHHHhhh----c------------ccccChhHHHHHHHHhhcCCc--cCC
Q 046779 30 ATKAKIRRAVE-------AERIPYTYVASNFFAGLYL----S------------IIFNKEDDIGINSIKAVDDPR--TLN 84 (183)
Q Consensus 30 ~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~----~------------~~~t~~~Dia~~va~~l~~p~--~~~ 84 (183)
..|..++.+.+ ..++..+.++||++..-.. + -.+.+.+|+|+++..++.++. ..+
T Consensus 154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G 233 (245)
T PRK12824 154 AAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITG 233 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccC
Confidence 55655544433 3589999999999853211 0 246788999999888876543 234
Q ss_pred eEEEEe
Q 046779 85 KILYIR 90 (183)
Q Consensus 85 ~~~~v~ 90 (183)
+.+.+.
T Consensus 234 ~~~~~~ 239 (245)
T PRK12824 234 ETISIN 239 (245)
T ss_pred cEEEEC
Confidence 666665
No 138
>PRK06138 short chain dehydrogenase; Provisional
Probab=41.48 E-value=81 Score=24.22 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhh----h-----c------------c-cccChhHHHHHHHHhhc
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLY----L-----S------------I-IFNKEDDIGINSIKAVD 78 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~----~-----~------------~-~~t~~~Dia~~va~~l~ 78 (183)
....|...+.+.+. .++..+.+++|+...-. . + . .+.+..|+|+++..++.
T Consensus 153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 232 (252)
T PRK06138 153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS 232 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 34566666555444 48999999999874211 0 0 2 36789999999999888
Q ss_pred CCc-c-CCeEEEEe
Q 046779 79 DPR-T-LNKILYIR 90 (183)
Q Consensus 79 ~p~-~-~~~~~~v~ 90 (183)
++. . .+..+.+.
T Consensus 233 ~~~~~~~g~~~~~~ 246 (252)
T PRK06138 233 DESSFATGTTLVVD 246 (252)
T ss_pred chhcCccCCEEEEC
Confidence 765 2 23445554
No 139
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=40.20 E-value=74 Score=24.45 Aligned_cols=63 Identities=8% Similarity=0.048 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHH-------HCCCCeEEEecchHHHhhh-----c------------ccccChhHHHHHHHHhhcCCc--
Q 046779 28 SFATKAKIRRAVE-------AERIPYTYVASNFFAGLYL-----S------------IIFNKEDDIGINSIKAVDDPR-- 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~-----~------------~~~t~~~Dia~~va~~l~~p~-- 81 (183)
....|..++.+.+ ..++.++.|+||+...-+. + --..+.+|+|+.++.++.++.
T Consensus 157 Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~ 236 (248)
T PRK06947 157 YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASY 236 (248)
T ss_pred cHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 3456666664433 2489999999999742211 0 124678999999999888764
Q ss_pred cCCeEEEEe
Q 046779 82 TLNKILYIR 90 (183)
Q Consensus 82 ~~~~~~~v~ 90 (183)
..++.+.+.
T Consensus 237 ~~G~~~~~~ 245 (248)
T PRK06947 237 VTGALLDVG 245 (248)
T ss_pred cCCceEeeC
Confidence 234555444
No 140
>PF13055 DUF3917: Protein of unknown function (DUF3917)
Probab=39.08 E-value=11 Score=23.21 Aligned_cols=8 Identities=38% Similarity=0.468 Sum_probs=6.9
Q ss_pred CCceEecc
Q 046779 2 FISQRFFP 9 (183)
Q Consensus 2 ~~VkrFiP 9 (183)
.|.|||+|
T Consensus 6 ~glkrfvp 13 (71)
T PF13055_consen 6 NGLKRFVP 13 (71)
T ss_pred cCcccccC
Confidence 48899999
No 141
>PRK06181 short chain dehydrogenase; Provisional
Probab=38.89 E-value=53 Score=25.60 Aligned_cols=51 Identities=14% Similarity=0.133 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhhc-----------------ccccChhHHHHHHHHhhcC
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYLS-----------------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~~-----------------~~~t~~~Dia~~va~~l~~ 79 (183)
...|..++.+.+ ..++.++.|+||+....+.. ..+++.+|+|+++..++..
T Consensus 151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence 356766665543 36899999999987432210 2467888888888888763
No 142
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=38.49 E-value=1.2e+02 Score=23.86 Aligned_cols=64 Identities=13% Similarity=0.031 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHH-----Hh-----hh---cc--cccChhHHHHHHHHhhcCCc-c-C
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFA-----GL-----YL---SI--IFNKEDDIGINSIKAVDDPR-T-L 83 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~-----~~-----~~---~~--~~t~~~Dia~~va~~l~~p~-~-~ 83 (183)
....|..++.+.+. .||..+.|+||++. .. +. ++ .+.+.+|+|..++.++.++. . .
T Consensus 173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 252 (267)
T TIGR02685 173 YTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYIT 252 (267)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcc
Confidence 44788888777665 58999999999862 10 00 11 35688999999999887653 2 3
Q ss_pred CeEEEEec
Q 046779 84 NKILYIRP 91 (183)
Q Consensus 84 ~~~~~v~~ 91 (183)
++.+.+.|
T Consensus 253 G~~~~v~g 260 (267)
T TIGR02685 253 GTCIKVDG 260 (267)
T ss_pred cceEEECC
Confidence 45666653
No 143
>PF13592 HTH_33: Winged helix-turn helix
Probab=38.04 E-value=93 Score=18.84 Aligned_cols=35 Identities=9% Similarity=0.314 Sum_probs=27.3
Q ss_pred CCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHcCC
Q 046779 93 CNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEASY 132 (183)
Q Consensus 93 ~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~~~ 132 (183)
+..+|..+|.+.+++..|.. .|...+...|...|+
T Consensus 2 ~~~wt~~~i~~~I~~~fgv~-----ys~~~v~~lL~r~G~ 36 (60)
T PF13592_consen 2 GGRWTLKEIAAYIEEEFGVK-----YSPSGVYRLLKRLGF 36 (60)
T ss_pred CCcccHHHHHHHHHHHHCCE-----EcHHHHHHHHHHcCC
Confidence 35789999999999999875 367777777776654
No 144
>PRK13761 hypothetical protein; Provisional
Probab=36.50 E-value=1.3e+02 Score=24.05 Aligned_cols=93 Identities=18% Similarity=0.162 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHCCCCe--EEEec--chHHHhhhc-ccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHH
Q 046779 29 FATKAKIRRAVEAERIPY--TYVAS--NFFAGLYLS-IIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVS 103 (183)
Q Consensus 29 ~~~k~~i~~~l~~~gi~~--T~i~~--g~F~~~~~~-~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~ 103 (183)
+-.+.++.+.+++ |+-. -.|.. |==|||+++ -+.-+....-+++|+.|..-+ +..+.|.|.--.+-..|+++
T Consensus 12 L~~Rekiveg~~~-Gi~a~qGLIAhGRGEaFDYLlGEkT~~~A~~A~raAaA~LLlA~--~PVISVNGN~AAL~p~eive 88 (248)
T PRK13761 12 LLTREKIVEGVEK-GITAKQGLIAHGRGEAFDYLLGEKTTPSALEAERAAAALLLLAK--HPVISVNGNTAALVPEEIVE 88 (248)
T ss_pred HHHHHHHHHHHHc-CcccccchhhccCccHHhHhcccCCcHHHHHHHHHHHHHHHhcC--CCeEEEcchHHhhChHHHHH
Confidence 3445666666664 3321 11222 333588887 344444555566666665444 45778886667888999998
Q ss_pred HHHHHhCCceeE--EeCCHHHHHH
Q 046779 104 LWEEKIGKALDR--VYVTEEQLLK 125 (183)
Q Consensus 104 ~~~~~~G~~~~~--~~~s~~~~~~ 125 (183)
+.+ ++|-++++ -|-+.+-.++
T Consensus 89 La~-~~~A~iEVNLF~RT~eR~~~ 111 (248)
T PRK13761 89 LAE-ALNAKLEVNLFYRTEERVEK 111 (248)
T ss_pred HHH-HhCCCEEEEeccCCHHHHHH
Confidence 766 45666666 4777766544
No 145
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=35.14 E-value=1.1e+02 Score=23.56 Aligned_cols=62 Identities=10% Similarity=0.162 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .||..+.|+||++..-.. | -.+.+.+|||.++...+.+.. .
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~ 238 (254)
T PRK08085 159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDF 238 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 4567766666555 489999999998843211 0 235678999998888887543 3
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 239 i~G~~i~~d 247 (254)
T PRK08085 239 VNGHLLFVD 247 (254)
T ss_pred CcCCEEEEC
Confidence 24556665
No 146
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=34.95 E-value=1.4e+02 Score=23.00 Aligned_cols=62 Identities=11% Similarity=0.081 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----------------c-ccccChhHHHHHHHHhhcCCc--c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----------------S-IIFNKEDDIGINSIKAVDDPR--T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----------------~-~~~t~~~Dia~~va~~l~~p~--~ 82 (183)
...|..++.+.+. .|+..+.|+||+...-.. + ..+.+..|+|+++..++.... .
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~ 240 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYS 240 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCccccc
Confidence 4567776555443 589999999998742110 1 235678999998888876442 2
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 241 ~G~~~~i~ 248 (256)
T PRK12745 241 TGQAIHVD 248 (256)
T ss_pred CCCEEEEC
Confidence 34666765
No 147
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=34.86 E-value=1e+02 Score=23.66 Aligned_cols=62 Identities=10% Similarity=0.001 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhh-----h--------------------c-ccccChhHHHHHHHH
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLY-----L--------------------S-IIFNKEDDIGINSIK 75 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~-----~--------------------~-~~~t~~~Dia~~va~ 75 (183)
...|..++.+.+. .+|..+.|+||+...-. . + -.+.+.+|+|+++..
T Consensus 149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHH
Confidence 3456665555433 57999999999763211 0 0 246788999999999
Q ss_pred hhcCCc-c-CCeEEEEe
Q 046779 76 AVDDPR-T-LNKILYIR 90 (183)
Q Consensus 76 ~l~~p~-~-~~~~~~v~ 90 (183)
++.+.. . .++.+.+.
T Consensus 229 l~~~~~~~~~g~~i~~~ 245 (252)
T PRK08220 229 LASDLASHITLQDIVVD 245 (252)
T ss_pred HhcchhcCccCcEEEEC
Confidence 887653 2 34555655
No 148
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=34.41 E-value=1.4e+02 Score=22.72 Aligned_cols=62 Identities=13% Similarity=0.085 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhh------------h---c-ccccChhHHHHHHHHhhcCCccCCe
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLY------------L---S-IIFNKEDDIGINSIKAVDDPRTLNK 85 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~------------~---~-~~~t~~~Dia~~va~~l~~p~~~~~ 85 (183)
...|..++.+.+. .++..+.++||+...-. . + ..+.+.+|+|+.+..++.+....++
T Consensus 164 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~g~ 243 (253)
T PRK08217 164 SASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIENDYVTGR 243 (253)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcCCCcCCc
Confidence 4677766655443 58999999999974211 0 1 2356889999999988864333456
Q ss_pred EEEEe
Q 046779 86 ILYIR 90 (183)
Q Consensus 86 ~~~v~ 90 (183)
.+.+.
T Consensus 244 ~~~~~ 248 (253)
T PRK08217 244 VLEID 248 (253)
T ss_pred EEEeC
Confidence 66665
No 149
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=34.39 E-value=1.9e+02 Score=21.25 Aligned_cols=74 Identities=15% Similarity=-0.015 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHCCCCeEEEecchHHHhhhcccccChhHHHHHHHHhhcCCccCCeEEEEecCCCccCHHHHHHHHHH
Q 046779 28 SFATKAKIRRAVEAERIPYTYVASNFFAGLYLSIIFNKEDDIGINSIKAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEE 107 (183)
Q Consensus 28 ~~~~k~~i~~~l~~~gi~~T~i~~g~F~~~~~~~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~ 107 (183)
-+..|..+.++|++.|.+.+-+-+ + -++..|+|..|+..+.+.+ ..+-+-+. | |.--+.=.+-|
T Consensus 11 G~~lK~~l~~~L~~~g~eV~D~G~----~------~~dypd~a~~va~~V~~~e-~~~GIliC--G---tGiG~siaANK 74 (141)
T PRK12613 11 GNALKELIKSFLQEEGYDIIDVTD----I------NSDFIDNTLAVAKAVNEAE-GRLGIMVD--A---YGAGPFMVATK 74 (141)
T ss_pred hHHHHHHHHHHHHHCCCEEEEcCC----C------CCChHHHHHHHHHHHHcCC-CceEEEEc--C---CCHhHhhhhhc
Confidence 367799999999999876655543 1 1688999999999997555 34556666 3 44455556667
Q ss_pred HhCCceeEEe
Q 046779 108 KIGKALDRVY 117 (183)
Q Consensus 108 ~~G~~~~~~~ 117 (183)
+.|..--..+
T Consensus 75 v~GIRaA~~~ 84 (141)
T PRK12613 75 LKGMVAAEVS 84 (141)
T ss_pred CCCeEEEEEC
Confidence 7776544443
No 150
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=34.25 E-value=48 Score=19.59 Aligned_cols=39 Identities=21% Similarity=0.293 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHhCCce
Q 046779 68 DIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKIGKAL 113 (183)
Q Consensus 68 Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~ 113 (183)
|+|+.| .++. .|++-+.+- |..+| .|+-+++..+.|++.
T Consensus 8 DLa~lv----Dd~kvdWd~wvSf~--GrPlt-devK~a~k~i~~~~l 47 (49)
T PF06543_consen 8 DLADLV----DDPKVDWDKWVSFD--GRPLT-DEVKEAMKLIFGKRL 47 (49)
T ss_pred cHHHHc----CCcccchHHheeeC--CeeCC-HHHHHHHHHHHhhhc
Confidence 555544 6666 478888876 66775 677778888887764
No 151
>PRK06523 short chain dehydrogenase; Provisional
Probab=34.08 E-value=1.4e+02 Score=23.11 Aligned_cols=63 Identities=10% Similarity=-0.003 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------------------------c-ccccChhHHHH
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------------------------S-IIFNKEDDIGI 71 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------------------------~-~~~t~~~Dia~ 71 (183)
-..|..++.+.+. .|+....|+||+...-.. | -.+.+.+|||+
T Consensus 153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~ 232 (260)
T PRK06523 153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE 232 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence 3567766655443 589999999998742110 0 12457788888
Q ss_pred HHHHhhcCCc-c-CCeEEEEec
Q 046779 72 NSIKAVDDPR-T-LNKILYIRP 91 (183)
Q Consensus 72 ~va~~l~~p~-~-~~~~~~v~~ 91 (183)
+++.++.++. . .++.+.+.|
T Consensus 233 ~~~~l~s~~~~~~~G~~~~vdg 254 (260)
T PRK06523 233 LIAFLASDRAASITGTEYVIDG 254 (260)
T ss_pred HHHHHhCcccccccCceEEecC
Confidence 8888887643 2 345666653
No 152
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=33.13 E-value=38 Score=26.31 Aligned_cols=48 Identities=15% Similarity=0.061 Sum_probs=34.2
Q ss_pred CCceEec-cCCCCCCCCcchhhhhchhhHHHHHHHHHHHHHCCCC-eEEEecchHH
Q 046779 2 FISQRFF-PSEFGNDVDRVHAVELARTSFATKAKIRRAVEAERIP-YTYVASNFFA 55 (183)
Q Consensus 2 ~~VkrFi-PSefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~~gi~-~T~i~~g~F~ 55 (183)
.|||.|+ -|.=|.|++.. .-.++.|-++|+-+.+...+ +.++|||...
T Consensus 121 ~Gck~fvLvSS~GAd~sSr------FlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll 170 (238)
T KOG4039|consen 121 KGCKTFVLVSSAGADPSSR------FLYMKMKGEVERDVIELDFKHIIILRPGPLL 170 (238)
T ss_pred CCCeEEEEEeccCCCcccc------eeeeeccchhhhhhhhccccEEEEecCccee
Confidence 4788885 45666665321 01247899999999998877 6888999775
No 153
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=32.93 E-value=91 Score=23.81 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhh-----c---------cc---ccChhHHHHHHHHhhcCCc--c
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYL-----S---------II---FNKEDDIGINSIKAVDDPR--T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~-----~---------~~---~t~~~Dia~~va~~l~~p~--~ 82 (183)
...|..++..++ +.++..+.|+||+...-+. + .+ ..+.+|+|+.+..++.++. .
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~ 236 (247)
T PRK09730 157 AASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYV 236 (247)
T ss_pred HhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCc
Confidence 456666655443 3589999999999753211 0 11 2478999999988887654 2
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.+..+.+.
T Consensus 237 ~g~~~~~~ 244 (247)
T PRK09730 237 TGSFIDLA 244 (247)
T ss_pred cCcEEecC
Confidence 23445444
No 154
>PRK06123 short chain dehydrogenase; Provisional
Probab=32.69 E-value=1.3e+02 Score=23.07 Aligned_cols=63 Identities=14% Similarity=0.075 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----c---------cc---ccChhHHHHHHHHhhcCCc--
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----S---------II---FNKEDDIGINSIKAVDDPR-- 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----~---------~~---~t~~~Dia~~va~~l~~p~-- 81 (183)
....|..++.+++. .++..+.|+||++..-+. + .+ ..+.+|+|+++..++.+..
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~ 236 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASY 236 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 34677777665443 489999999998842110 1 11 2578899999998887543
Q ss_pred cCCeEEEEe
Q 046779 82 TLNKILYIR 90 (183)
Q Consensus 82 ~~~~~~~v~ 90 (183)
..++.+.+.
T Consensus 237 ~~g~~~~~~ 245 (248)
T PRK06123 237 TTGTFIDVS 245 (248)
T ss_pred ccCCEEeec
Confidence 234556655
No 155
>PRK06128 oxidoreductase; Provisional
Probab=32.56 E-value=1.4e+02 Score=24.05 Aligned_cols=63 Identities=13% Similarity=-0.028 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .||....|+||+...-+. + --+.+.+|||.++..++.+.. .
T Consensus 206 ~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~ 285 (300)
T PRK06128 206 ASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSY 285 (300)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 4667776665543 589999999998742211 0 234678899999888887644 2
Q ss_pred -CCeEEEEec
Q 046779 83 -LNKILYIRP 91 (183)
Q Consensus 83 -~~~~~~v~~ 91 (183)
.++.+.+.|
T Consensus 286 ~~G~~~~v~g 295 (300)
T PRK06128 286 VTGEVFGVTG 295 (300)
T ss_pred ccCcEEeeCC
Confidence 346666663
No 156
>PRK08265 short chain dehydrogenase; Provisional
Probab=32.02 E-value=1.4e+02 Score=23.35 Aligned_cols=62 Identities=13% Similarity=0.066 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----c----------------ccccChhHHHHHHHHhhcCCc
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----S----------------IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----~----------------~~~t~~~Dia~~va~~l~~p~ 81 (183)
...|..++.+.+. .||....|+||+...-+. . --+.+.+|||+++..+++++.
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~ 230 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAA 230 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccc
Confidence 3567766655554 489999999997632111 0 013456899999988887653
Q ss_pred -c-CCeEEEEe
Q 046779 82 -T-LNKILYIR 90 (183)
Q Consensus 82 -~-~~~~~~v~ 90 (183)
. .++.+.+.
T Consensus 231 ~~~tG~~i~vd 241 (261)
T PRK08265 231 SFVTGADYAVD 241 (261)
T ss_pred cCccCcEEEEC
Confidence 2 34566665
No 157
>PRK09242 tropinone reductase; Provisional
Probab=31.97 E-value=2.1e+02 Score=22.03 Aligned_cols=62 Identities=13% Similarity=0.046 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHh----hhc--------------ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGL----YLS--------------IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~----~~~--------------~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .++..+.|.||+...- +.+ --+.+.+|++.++..++.++. .
T Consensus 161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 240 (257)
T PRK09242 161 GMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY 240 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccc
Confidence 4567776666553 5899999999986321 111 124578999999988887543 2
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 241 ~~g~~i~~~ 249 (257)
T PRK09242 241 ITGQCIAVD 249 (257)
T ss_pred ccCCEEEEC
Confidence 35666665
No 158
>PRK14834 undecaprenyl pyrophosphate synthase; Provisional
Probab=31.84 E-value=1.5e+02 Score=23.86 Aligned_cols=65 Identities=22% Similarity=0.159 Sum_probs=40.2
Q ss_pred hHHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 67 DDIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 67 ~Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
.++.+.+..+-..-. ..+-.+.++ -..-+-.||++.+.+.. ..++....++.+.+.+.+.....|
T Consensus 115 ~~l~~~i~~~e~~T~~~~~~~lnla--~~Yggr~EI~~A~k~~~~~~~~g~~~~~dI~e~~i~~~L~~~~~p 184 (249)
T PRK14834 115 ADICALLNEAEELTRNNTGLNLVIA--FNYGSRDEIARAVRRLAREVAEGRLDPASIDAETISANLDTADIP 184 (249)
T ss_pred HHHHHHHHHHHHhhccCCceEEEEE--eccCCHHHHHHHHHHHHHHHHcCCCChhhCCHHHHHHHhccCCCC
Confidence 355555544443222 223466777 56777889988887763 334555678888888887655444
No 159
>PRK07109 short chain dehydrogenase; Provisional
Probab=31.64 E-value=1.3e+02 Score=24.80 Aligned_cols=59 Identities=19% Similarity=0.226 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHH---------CCCCeEEEecchHHH----hh---hc------ccccChhHHHHHHHHhhcCCccCCeE
Q 046779 29 FATKAKIRRAVEA---------ERIPYTYVASNFFAG----LY---LS------IIFNKEDDIGINSIKAVDDPRTLNKI 86 (183)
Q Consensus 29 ~~~k~~i~~~l~~---------~gi~~T~i~~g~F~~----~~---~~------~~~t~~~Dia~~va~~l~~p~~~~~~ 86 (183)
...|..++.+.+. .+|.++.|+||+... +. .. ..+.+.+|+|+++..++.+|. +.
T Consensus 158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~---~~ 234 (334)
T PRK07109 158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHPR---RE 234 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCCC---cE
Confidence 3566665444322 468999999997532 11 11 346788999999999998763 44
Q ss_pred EEEe
Q 046779 87 LYIR 90 (183)
Q Consensus 87 ~~v~ 90 (183)
+++.
T Consensus 235 ~~vg 238 (334)
T PRK07109 235 LWVG 238 (334)
T ss_pred EEeC
Confidence 5554
No 160
>PRK08278 short chain dehydrogenase; Provisional
Probab=31.53 E-value=1.9e+02 Score=22.78 Aligned_cols=54 Identities=7% Similarity=-0.032 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHh-----hhc-----ccccChhHHHHHHHHhhcCCc
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGL-----YLS-----IIFNKEDDIGINSIKAVDDPR 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~-----~~~-----~~~t~~~Dia~~va~~l~~p~ 81 (183)
....|..++.+.+. .+|....|.||++.+. +.. -.+.+.+|+|+.++.++.++.
T Consensus 164 Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 164 YTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccccccccccCCHHHHHHHHHHHhcCcc
Confidence 45788888887665 4788899999965322 111 235678888888888887654
No 161
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=31.17 E-value=1.2e+02 Score=23.26 Aligned_cols=62 Identities=11% Similarity=0.114 Sum_probs=39.3
Q ss_pred HHHHHHHHHHH-------HHCCCCeEEEecchHHHhhh----c------------ccccChhHHHHHHHHhhcCCc--cC
Q 046779 29 FATKAKIRRAV-------EAERIPYTYVASNFFAGLYL----S------------IIFNKEDDIGINSIKAVDDPR--TL 83 (183)
Q Consensus 29 ~~~k~~i~~~l-------~~~gi~~T~i~~g~F~~~~~----~------------~~~t~~~Dia~~va~~l~~p~--~~ 83 (183)
...|..++.+. +..|+.++.|+||++..-+. + ..+.+.+|+|.++..++.++. ..
T Consensus 154 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ 233 (246)
T PRK12938 154 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFST 233 (246)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCcc
Confidence 35566544433 33689999999998863221 1 235788899998888887653 23
Q ss_pred CeEEEEe
Q 046779 84 NKILYIR 90 (183)
Q Consensus 84 ~~~~~v~ 90 (183)
++.+.+.
T Consensus 234 g~~~~~~ 240 (246)
T PRK12938 234 GADFSLN 240 (246)
T ss_pred CcEEEEC
Confidence 4555555
No 162
>PRK14831 undecaprenyl pyrophosphate synthase; Provisional
Probab=30.36 E-value=1.8e+02 Score=23.45 Aligned_cols=64 Identities=9% Similarity=0.035 Sum_probs=39.4
Q ss_pred HHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 68 DIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 68 Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
++.+.+..+-.... ..+-.+.++ -..-+-+||++++.+.. ...+....++.+.+.+.+...+.|
T Consensus 122 ~l~~~i~~~e~~T~~~~~~~Lnia--~~Yggr~EIv~A~~~l~~~v~~g~l~~~~i~e~~~~~~L~t~~~p 190 (249)
T PRK14831 122 SLQEEISRSTELTKNNNGIHFNVC--TNYGGRQEIVQAARAIAQQVQQGELDPSEIDENLFESELYTAGIK 190 (249)
T ss_pred HHHHHHHHHHHHhccCCceEEEEE--ecCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHhhccCCCC
Confidence 44555544443333 234567777 66778899998887754 334555667778887777544444
No 163
>PRK14840 undecaprenyl pyrophosphate synthase; Provisional
Probab=30.35 E-value=1.7e+02 Score=23.58 Aligned_cols=64 Identities=16% Similarity=0.166 Sum_probs=39.4
Q ss_pred HHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 68 DIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 68 Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
++.+.+..+-.... ..+-.++++ -..-+-+||++++.++. ..++....++.+.+.+.+...+.|
T Consensus 124 ~l~~~i~~~e~~T~~~~~~~Lnla--~~Yggr~EI~~A~~~~~~~v~~~~~~~~~i~~~~i~~~L~~~~~p 192 (250)
T PRK14840 124 ELQNNIEQASSATAHYSRMELVLA--INYGGKDELVRAFKKLHQDLANKKISSDDISEELISSYLDTSGLP 192 (250)
T ss_pred HHHHHHHHHHHHhccCCceEEEEE--ecCCcHHHHHHHHHHHHHHHHhCCCChhhCCHHHHHHHhccCCCC
Confidence 45555544443222 234567777 56777889988877653 345555677888887777544444
No 164
>PRK12742 oxidoreductase; Provisional
Probab=30.10 E-value=1.6e+02 Score=22.29 Aligned_cols=62 Identities=8% Similarity=-0.033 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc---------------ccccChhHHHHHHHHhhcCCc-c-CC
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS---------------IIFNKEDDIGINSIKAVDDPR-T-LN 84 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~---------------~~~t~~~Dia~~va~~l~~p~-~-~~ 84 (183)
...|..++...+. .|+..+.|+||+...-+.+ -.+.+.+|+|.++.-++.+.. . .+
T Consensus 147 ~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G 226 (237)
T PRK12742 147 AASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTG 226 (237)
T ss_pred HHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccC
Confidence 4677777665543 5799999999988532211 124688899998888776543 2 23
Q ss_pred eEEEEe
Q 046779 85 KILYIR 90 (183)
Q Consensus 85 ~~~~v~ 90 (183)
..+.+-
T Consensus 227 ~~~~~d 232 (237)
T PRK12742 227 AMHTID 232 (237)
T ss_pred CEEEeC
Confidence 444443
No 165
>TIGR01256 modA molybdenum ABC transporter, periplasmic molybdate-binding protein. The model describes the molybdate ABC transporter periplasmic binding protein in bacteria and archae. Several of the periplasmic receptors constitute a diverse class of binding proteins that differ widely in size, sequence and ligand specificity. It has been shown experimentally by radioactive labeling that ModA represent hydrophylioc periplasmic-binding protein in gram-negative organisms and its counterpart in gram-positive organisms is a lipoprotein. The other components of the system include the ModB, an integral membrane protein and ModC the ATP-binding subunit. Invariably almost all of them display a common beta/alpha folding motif and have similar tertiary structures consisting of two globular domains.
Probab=29.83 E-value=1.1e+02 Score=23.21 Aligned_cols=35 Identities=11% Similarity=0.296 Sum_probs=26.6
Q ss_pred ccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHH
Q 046779 95 IYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQE 129 (183)
Q Consensus 95 ~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~ 129 (183)
..-.+++++.+++.+|.++++.+.+..++.+++..
T Consensus 5 ~~~~~~~~~~f~~~~gi~V~~~~~gs~~l~~~l~~ 39 (216)
T TIGR01256 5 TDALKEIAKQFEKRTGNKVVFSFGSSGTLYTQIEN 39 (216)
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeCChHHHHHHHHc
Confidence 33467788888888888888888888877777764
No 166
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=29.57 E-value=1.7e+02 Score=19.21 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=29.8
Q ss_pred CCccCHHHHHHHHHHHhCCceeEE-----eCCHHHHHHHHHHc
Q 046779 93 CNIYSFNDLVSLWEEKIGKALDRV-----YVTEEQLLKNIQEA 130 (183)
Q Consensus 93 ~~~~T~~ev~~~~~~~~G~~~~~~-----~~s~~~~~~~~~~~ 130 (183)
+..+|-.++.+.+.+..|...++. .+++++|.+.+.+.
T Consensus 15 ~~~~t~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~k 57 (77)
T TIGR03853 15 GEPYTRESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKK 57 (77)
T ss_pred CCCcCHHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHC
Confidence 578899999999999999977764 55667777776654
No 167
>COG2879 Uncharacterized small protein [Function unknown]
Probab=29.50 E-value=37 Score=21.35 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=16.1
Q ss_pred ccccCCCCcccCHHHHHHh
Q 046779 163 ATELYPDVNYTTVDEYLNQ 181 (183)
Q Consensus 163 ~~~~~p~~~~~t~~e~l~~ 181 (183)
-+...||-+++|.+||.++
T Consensus 32 mr~~hPd~p~mT~~EFfre 50 (65)
T COG2879 32 MRKKHPDKPPMTYEEFFRE 50 (65)
T ss_pred HHHhCcCCCcccHHHHHHH
Confidence 4667899999999999875
No 168
>PRK07102 short chain dehydrogenase; Provisional
Probab=29.28 E-value=97 Score=23.80 Aligned_cols=51 Identities=10% Similarity=0.161 Sum_probs=32.7
Q ss_pred HHHHHHHHHH-------HHCCCCeEEEecchHHHhhhc------ccccChhHHHHHHHHhhcCC
Q 046779 30 ATKAKIRRAV-------EAERIPYTYVASNFFAGLYLS------IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 30 ~~k~~i~~~l-------~~~gi~~T~i~~g~F~~~~~~------~~~t~~~Dia~~va~~l~~p 80 (183)
..|..++.+. ...|+..+.++||+...-+.. ..+.+.+|+|+.+..++..+
T Consensus 150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKLPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCCCccccCCHHHHHHHHHHHHhCC
Confidence 4565544333 346899999999987533211 33567788888887777643
No 169
>PRK06196 oxidoreductase; Provisional
Probab=29.21 E-value=1.8e+02 Score=23.54 Aligned_cols=53 Identities=11% Similarity=-0.035 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhhc-------------------c--cccChhHHHHHHHHhhcCC
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYLS-------------------I--IFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~~-------------------~--~~t~~~Dia~~va~~l~~p 80 (183)
...|..++.+.+ ..||.++.|+||+....+.. + .+.+.+|+|..++.++..|
T Consensus 182 ~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 261 (315)
T PRK06196 182 GQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSP 261 (315)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCC
Confidence 466776554433 35899999999988533210 1 2567899999999999876
Q ss_pred c
Q 046779 81 R 81 (183)
Q Consensus 81 ~ 81 (183)
+
T Consensus 262 ~ 262 (315)
T PRK06196 262 Q 262 (315)
T ss_pred c
Confidence 5
No 170
>PRK07035 short chain dehydrogenase; Provisional
Probab=28.77 E-value=2.6e+02 Score=21.39 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .|+..+.|.||+...-+. + -.+.+.+|+|+.+..++.+.. .
T Consensus 159 ~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 238 (252)
T PRK07035 159 SITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSY 238 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccC
Confidence 4677777766654 489999999997642111 1 235678899999998887654 3
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+-
T Consensus 239 ~~g~~~~~d 247 (252)
T PRK07035 239 TTGECLNVD 247 (252)
T ss_pred ccCCEEEeC
Confidence 34555555
No 171
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=28.51 E-value=1.8e+02 Score=22.55 Aligned_cols=63 Identities=13% Similarity=-0.008 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc-------------ccccChhHHHHHHHHhhcCCc-c-CCe
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS-------------IIFNKEDDIGINSIKAVDDPR-T-LNK 85 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~-------------~~~t~~~Dia~~va~~l~~p~-~-~~~ 85 (183)
.-..|..++.+++. .++..+.|+||+...-+.. --+.+..|+|+.+..++.+.. . .++
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~ 246 (256)
T PRK12748 167 YAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQ 246 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCC
Confidence 34678888776554 4899999999987532211 225678899999887776533 2 245
Q ss_pred EEEEe
Q 046779 86 ILYIR 90 (183)
Q Consensus 86 ~~~v~ 90 (183)
.+.+-
T Consensus 247 ~~~~d 251 (256)
T PRK12748 247 VIHSE 251 (256)
T ss_pred EEEec
Confidence 55553
No 172
>PRK05993 short chain dehydrogenase; Provisional
Probab=28.17 E-value=2.7e+02 Score=21.92 Aligned_cols=28 Identities=14% Similarity=0.035 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHH
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAG 56 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~ 56 (183)
...|..++.+.+ ..||.++.|+||+...
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T 183 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET 183 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence 467877777644 3689999999998753
No 173
>PRK14829 undecaprenyl pyrophosphate synthase; Provisional
Probab=27.59 E-value=1.9e+02 Score=23.21 Aligned_cols=64 Identities=11% Similarity=0.013 Sum_probs=37.3
Q ss_pred HHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 68 DIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 68 Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
++-+.+..+-.... ..+-.++++ -..-+-+||++++++.. ...+....++.+.+.+.+...+.|
T Consensus 116 ~~~~~i~~~e~~T~~~~~~~Lnia--~~Y~gr~EI~~A~~~~~~~~~~g~~~~~~i~e~~i~~~L~~~~~p 184 (243)
T PRK14829 116 SVIDELEAAEELTKNNTTMDLVFC--VNYGGRAEIADAAAAIAREVRDGKISGDRVTEKMISDHLYNPDMP 184 (243)
T ss_pred HHHHHHHHHHHHhccCCceEEEEE--ecCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHHhccCCCC
Confidence 44444443333222 223467777 56777888988877653 234445567777777777554444
No 174
>TIGR03227 PhnS 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein. This ABC transporter periplasmic substrate binding protein component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238). The protein contains a match to pfam01547 for the "Bacterial extracellular solute-binding protein" domain.
Probab=27.39 E-value=3.7e+02 Score=22.45 Aligned_cols=31 Identities=13% Similarity=0.251 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCceeEEeCCHHHHHHHHH
Q 046779 98 FNDLVSLWEEKIGKALDRVYVTEEQLLKNIQ 128 (183)
Q Consensus 98 ~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~ 128 (183)
.+++++.+++.+|.++++...+..++..++.
T Consensus 54 ~~~i~~~Fe~~~Gi~V~~~~~~s~~~~~rl~ 84 (367)
T TIGR03227 54 YQDQFDAFEKAEGIKVNIVEAGGGEVVERAA 84 (367)
T ss_pred HHHHHHHHHHHHCCEEEEEeCChHHHHHHHH
Confidence 5789999999999999998887766655543
No 175
>PRK06949 short chain dehydrogenase; Provisional
Probab=27.30 E-value=2.9e+02 Score=21.19 Aligned_cols=61 Identities=13% Similarity=0.079 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHH-------CCCCeEEEecchHHHhh-----h-----------c-ccccChhHHHHHHHHhhcCCc-c-C
Q 046779 30 ATKAKIRRAVEA-------ERIPYTYVASNFFAGLY-----L-----------S-IIFNKEDDIGINSIKAVDDPR-T-L 83 (183)
Q Consensus 30 ~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~-----~-----------~-~~~t~~~Dia~~va~~l~~p~-~-~ 83 (183)
..|...+.+.+. .++..+.|+||+...-+ . + -.+...+|+|++++-++.++. . .
T Consensus 168 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~ 247 (258)
T PRK06949 168 MSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFIN 247 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCC
Confidence 456655554443 58999999999874211 0 0 235667888888888887543 2 2
Q ss_pred CeEEEEe
Q 046779 84 NKILYIR 90 (183)
Q Consensus 84 ~~~~~v~ 90 (183)
+..+.+-
T Consensus 248 G~~i~~d 254 (258)
T PRK06949 248 GAIISAD 254 (258)
T ss_pred CcEEEeC
Confidence 3444443
No 176
>PF11491 DUF3213: Protein of unknown function (DUF3213) ; InterPro: IPR021583 The backbone structure of this family of proteins has been determined however the function remains unknown. The protein has an alpha and beta structure with a ferredoxin-like fold []. ; PDB: 2F40_A.
Probab=27.27 E-value=43 Score=22.33 Aligned_cols=49 Identities=16% Similarity=0.185 Sum_probs=18.4
Q ss_pred HhhcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHH
Q 046779 75 KAVDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLK 125 (183)
Q Consensus 75 ~~l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~ 125 (183)
+++.++=..+..+.+- ...++-.++++.+++.-..-+.-..++++++..
T Consensus 28 RvFiNgYar~g~VifD--e~kl~~e~lL~~le~~kpEVi~ek~lTveELIE 76 (88)
T PF11491_consen 28 RVFINGYARNGFVIFD--ESKLSKEELLEMLEEFKPEVIEEKELTVEELIE 76 (88)
T ss_dssp -----TTSS--EEE----B-S-SHHHH---HHHTTT-SS-------SS---
T ss_pred eeeecccccceEEEEC--cccCCHHHHHHHHHhcChhheeeccccHHHHHH
Confidence 4555554455555555 688999999999999877777777888877754
No 177
>PRK05867 short chain dehydrogenase; Provisional
Probab=27.07 E-value=1.9e+02 Score=22.28 Aligned_cols=62 Identities=11% Similarity=0.126 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------c----ccccChhHHHHHHHHhhcCCc-c-CC
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------S----IIFNKEDDIGINSIKAVDDPR-T-LN 84 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------~----~~~t~~~Dia~~va~~l~~p~-~-~~ 84 (183)
...|..++.+.+. .||....|.||+...-+. . -.+.+.+|||++++-++++.. . .+
T Consensus 162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG 241 (253)
T PRK05867 162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTG 241 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCC
Confidence 4667777666554 478999999998742211 0 125789999999999887644 3 24
Q ss_pred eEEEEe
Q 046779 85 KILYIR 90 (183)
Q Consensus 85 ~~~~v~ 90 (183)
+.+.+-
T Consensus 242 ~~i~vd 247 (253)
T PRK05867 242 SDIVID 247 (253)
T ss_pred CeEEEC
Confidence 566665
No 178
>PRK07578 short chain dehydrogenase; Provisional
Probab=26.89 E-value=2.6e+02 Score=20.60 Aligned_cols=52 Identities=10% Similarity=0.123 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHH------CCCCeEEEecchHHHhhh------c-ccccChhHHHHHHHHhhcCC
Q 046779 29 FATKAKIRRAVEA------ERIPYTYVASNFFAGLYL------S-IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 29 ~~~k~~i~~~l~~------~gi~~T~i~~g~F~~~~~------~-~~~t~~~Dia~~va~~l~~p 80 (183)
...|..++.+.+. .|+..+.|.||+..+-+. + ....+.+|+|+.+..++..+
T Consensus 126 ~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 190 (199)
T PRK07578 126 ATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKYGPFFPGFEPVPAARVALAYVRSVEGA 190 (199)
T ss_pred HHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhhhhcCCCCCCCCHHHHHHHHHHHhccc
Confidence 3556666555443 578899999998754321 1 44678889998888887643
No 179
>cd00475 CIS_IPPS Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase) catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidooglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS are mechanistically and structurally distinct from trans-IPPS, lacking the DDXXD motifs, yet requiring Mg2+ for activity.
Probab=26.45 E-value=1.9e+02 Score=22.78 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=38.8
Q ss_pred HHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 68 DIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 68 Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
++.+.+..+-.... ..+-.+.++ ...-+.+||++++++.. ..++....++.+.+.+.+...+.|
T Consensus 102 ~~~~~~~~~e~~T~~~~~~~lni~--~~Y~gr~eI~~a~~~~~~~~~~~~~~~~~i~~~~~~~~L~~~~~p 170 (221)
T cd00475 102 SLQKEIKKAEEATKNNTGFTLNVA--FNYGGRQEIIHAVREIAEKVKAGKLTPEDIDESTLNKHLYTHDSP 170 (221)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEE--ecCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHhhCcCCCC
Confidence 44444444433222 223467777 66778899998887764 234455567788888877654444
No 180
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=26.13 E-value=2e+02 Score=22.30 Aligned_cols=62 Identities=15% Similarity=0.106 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .|+..+.|+||+...... + -.+.+.+|+|..+.-.+.+.. .
T Consensus 164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~ 243 (258)
T PRK06935 164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDY 243 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcC
Confidence 4677777666554 479999999998742211 0 235678899999988887554 2
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+-
T Consensus 244 ~~G~~i~~d 252 (258)
T PRK06935 244 VNGHILAVD 252 (258)
T ss_pred CCCCEEEEC
Confidence 34566655
No 181
>COG4650 RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms]
Probab=26.10 E-value=63 Score=27.25 Aligned_cols=45 Identities=27% Similarity=0.452 Sum_probs=26.0
Q ss_pred eEeccCCCCCCCCcchhhhhchhhHHHHHHHHHHHHH--------CCCC-eEEEecchH
Q 046779 5 QRFFPSEFGNDVDRVHAVELARTSFATKAKIRRAVEA--------ERIP-YTYVASNFF 54 (183)
Q Consensus 5 krFiPSefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~--------~gi~-~T~i~~g~F 54 (183)
|||.| ||+|-.... +..-+....+..++.+.+ ..|. ||+=.||.=
T Consensus 309 krf~p--fgsdr~v~s---dfqliagtvrdlrq~vaeg~fredl~arinlwtf~lpgl~ 362 (531)
T COG4650 309 KRFYP--FGSDRQVSS---DFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPGLR 362 (531)
T ss_pred hccCC--CCCcccccc---chHHhhhhHHHHHHHHhccchHHHHHHhhheeeeeccccc
Confidence 89999 999864321 111123455566665554 2333 788777753
No 182
>COG5394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.73 E-value=64 Score=24.38 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=26.6
Q ss_pred cCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeC-CHHHH
Q 046779 82 TLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYV-TEEQL 123 (183)
Q Consensus 82 ~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~-s~~~~ 123 (183)
..|+.+|-+|-|-.+|..++++.+.+ |.+|+|.+- |-|++
T Consensus 15 YaNRRLYnT~TSTYVTL~dla~mVk~--gedF~V~DAKsgeDi 55 (193)
T COG5394 15 YANRRLYNTGTSTYVTLEDLAQMVKE--GEDFRVQDAKSGEDI 55 (193)
T ss_pred cccchhcccCCceeeeHHHHHHHHhc--CCceEEeeccccchh
Confidence 45677776666677788888887775 777777643 33444
No 183
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=25.10 E-value=44 Score=20.48 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=20.1
Q ss_pred ccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHc
Q 046779 95 IYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEA 130 (183)
Q Consensus 95 ~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~ 130 (183)
..|..|+++.+.+..+.+.+...-+...+.+.+.+.
T Consensus 29 ~~t~~ei~~~l~~~y~~~~~~~~~dv~~fl~~L~~~ 64 (68)
T PF05402_consen 29 PRTVEEIVDALAEEYDVDPEEAEEDVEEFLEQLREK 64 (68)
T ss_dssp SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHC
Confidence 457888888888877655443344444555554443
No 184
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=24.90 E-value=1.7e+02 Score=22.78 Aligned_cols=61 Identities=15% Similarity=-0.024 Sum_probs=38.7
Q ss_pred HHHHHHHHH-------HHHCCCCeEEEecchHHH---------hhhc----ccccChhHHHHHHHHhhcCCc-c-CCeEE
Q 046779 30 ATKAKIRRA-------VEAERIPYTYVASNFFAG---------LYLS----IIFNKEDDIGINSIKAVDDPR-T-LNKIL 87 (183)
Q Consensus 30 ~~k~~i~~~-------l~~~gi~~T~i~~g~F~~---------~~~~----~~~t~~~Dia~~va~~l~~p~-~-~~~~~ 87 (183)
..|..++.. ++..+|..+.|+||+... .+.+ -.+.+.+|+|+.+..++.++. . .++.+
T Consensus 170 ~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i 249 (256)
T PRK12859 170 ATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQII 249 (256)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence 455555444 333689999999998632 1111 235689999999998887654 3 34555
Q ss_pred EEe
Q 046779 88 YIR 90 (183)
Q Consensus 88 ~v~ 90 (183)
.+-
T Consensus 250 ~~d 252 (256)
T PRK12859 250 HSE 252 (256)
T ss_pred EeC
Confidence 554
No 185
>PRK08324 short chain dehydrogenase; Validated
Probab=24.50 E-value=3.5e+02 Score=24.90 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHH-h------hh-------------------c----ccccChhHHH
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAG-L------YL-------------------S----IIFNKEDDIG 70 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~-~------~~-------------------~----~~~t~~~Dia 70 (183)
....|...+.+.+. .||.++.|+||+.++ . +. . -.+++.+|+|
T Consensus 571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA 650 (681)
T PRK08324 571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVA 650 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHH
Confidence 34677777777655 368899999988841 0 00 0 2468899999
Q ss_pred HHHHHhhcC--CccCCeEEEEec
Q 046779 71 INSIKAVDD--PRTLNKILYIRP 91 (183)
Q Consensus 71 ~~va~~l~~--p~~~~~~~~v~~ 91 (183)
+++..++.+ +...++.+.+.|
T Consensus 651 ~a~~~l~s~~~~~~tG~~i~vdg 673 (681)
T PRK08324 651 EAVVFLASGLLSKTTGAIITVDG 673 (681)
T ss_pred HHHHHHhCccccCCcCCEEEECC
Confidence 999998853 223456777763
No 186
>PRK14832 undecaprenyl pyrophosphate synthase; Provisional
Probab=24.27 E-value=2.2e+02 Score=23.01 Aligned_cols=65 Identities=12% Similarity=0.113 Sum_probs=39.0
Q ss_pred hHHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 67 DDIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 67 ~Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
.++.+.+..+-.... ..+-.++++ -..-+..||+++++++. ...+....++.+.+.+.+...+.|
T Consensus 119 ~~l~~~i~~~e~~T~~~~~~~Lnia--~~Yggr~EI~~A~k~~~~~v~~g~~~~~~i~e~~i~~~L~~~~~P 188 (253)
T PRK14832 119 KSLQTEMERSMTETLNNQAIHFTVA--VNYGSRNEITRACRQVAELVQQGKLSADAVNEQLVEQHLYTADTP 188 (253)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHHHHHhCCCChhhCCHHHHHHhhCcCCCC
Confidence 345555554443222 223477777 56778899999888753 223445567777777777544444
No 187
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=24.24 E-value=2.8e+02 Score=21.41 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHh----hhc------------ccccChhHHHHHHHHhhcCCc-c-
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGL----YLS------------IIFNKEDDIGINSIKAVDDPR-T- 82 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~----~~~------------~~~t~~~Dia~~va~~l~~p~-~- 82 (183)
....|..++.+++. .|+..+.++||+...- +.+ .-+.+.+|||+.++.++.+.. .
T Consensus 166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 245 (259)
T PRK08213 166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHI 245 (259)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 34667777666654 4788999999987421 111 224578999998888887654 3
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 246 ~G~~~~~~ 253 (259)
T PRK08213 246 TGQILAVD 253 (259)
T ss_pred cCCEEEEC
Confidence 35666665
No 188
>PRK04168 molybdate ABC transporter periplasmic substrate-binding protein; Provisional
Probab=24.24 E-value=1.2e+02 Score=25.49 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=33.3
Q ss_pred CCccCHHHHHHHHHHHh-CCceeEEeCCHHHHHHHHHHcCCCc
Q 046779 93 CNIYSFNDLVSLWEEKI-GKALDRVYVTEEQLLKNIQEASYPL 134 (183)
Q Consensus 93 ~~~~T~~ev~~~~~~~~-G~~~~~~~~s~~~~~~~~~~~~~p~ 134 (183)
+....++|+++.+++.+ |.++++..-+..++.+++.+.|.|.
T Consensus 41 sl~~~l~~i~~~fe~~~~gv~v~~~~~gSg~L~~QI~e~Gap~ 83 (334)
T PRK04168 41 SLSVPFEEYEKEFEAYHPNVDVQREAGGSVKCVRKITELGKKA 83 (334)
T ss_pred chHHHHHHHHHHHHHhCCCeeEEEEeCcHHHHHHHHHhcCCCC
Confidence 34556899999999875 8899999999999999996544443
No 189
>TIGR03730 tungstate_WtpA tungstate ABC transporter binding protein WtpA. Members of this protein family are tungstate (and, more weakly, molybdate) binding proteins of tungstate(/molybdate) ABC transporters, as first characterized in Pyrococcus furiosus. Model seed members and cutoffs, pending experimental evidence for more distant homologs, were chosen such that this model identifies select archaeal proteins, excluding weaker archaeal and all bacterial homologs. Note that this family is homologous to molybdate transporters, and that at least one other family of tungstate transporter binding protein, TupA, also exists.
Probab=24.11 E-value=1.2e+02 Score=24.58 Aligned_cols=42 Identities=17% Similarity=0.205 Sum_probs=33.1
Q ss_pred CCccCHHHHHHHHHHHh-CCceeEEeCCHHHHHHHHHHcCCCc
Q 046779 93 CNIYSFNDLVSLWEEKI-GKALDRVYVTEEQLLKNIQEASYPL 134 (183)
Q Consensus 93 ~~~~T~~ev~~~~~~~~-G~~~~~~~~s~~~~~~~~~~~~~p~ 134 (183)
|-.-.++||.+.+++.+ |.++++..-+..++.+++.+.|-|.
T Consensus 10 sL~~~~~ei~~~Fe~~~~gvkv~~~~~gSg~L~~Qi~e~Gap~ 52 (273)
T TIGR03730 10 SLSVPFEEMEKEFEAKHPNVDVQREAAGSVAAVRKITELGKPA 52 (273)
T ss_pred CcHHHHHHHHHHHHhhCCCceEEEEeCcHHHHHHHHHHcCCCe
Confidence 45667889999999876 8899999999999988886444443
No 190
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=24.10 E-value=86 Score=25.56 Aligned_cols=47 Identities=13% Similarity=0.234 Sum_probs=34.2
Q ss_pred HHHHHHHHHCCCCeEEEecchHHHhhhc------------ccccChhHHHHHHHHhhcC
Q 046779 33 AKIRRAVEAERIPYTYVASNFFAGLYLS------------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 33 ~~i~~~l~~~gi~~T~i~~g~F~~~~~~------------~~~t~~~Dia~~va~~l~~ 79 (183)
..++..|+..||..|.+.||+=.-.|.. .-+.+.+|+|+.+..++..
T Consensus 168 eaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 168 EALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred HHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhc
Confidence 4455556668999999999986644431 4467888888888888863
No 191
>PF13416 SBP_bac_8: Bacterial extracellular solute-binding protein; PDB: 2FNC_A 1ELJ_A 3TTM_B 3TTK_C 2W7Y_A 3RPW_A 2GHB_C 2GHA_A 1POY_3 1POT_A ....
Probab=23.57 E-value=1.2e+02 Score=23.56 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCceeEEeCCHHHHHHHHH
Q 046779 100 DLVSLWEEKIGKALDRVYVTEEQLLKNIQ 128 (183)
Q Consensus 100 ev~~~~~~~~G~~~~~~~~s~~~~~~~~~ 128 (183)
|+++.+++.+|.++++...+.+++.+.+.
T Consensus 1 ~l~~~f~~~~~i~V~~~~~~~~~~~~~l~ 29 (281)
T PF13416_consen 1 KLVKEFEKETGIKVEIQTFPSDDYQQKLQ 29 (281)
T ss_dssp HHHHHHHHHHTEEEEEEEESHHHHHHHHH
T ss_pred CHHHHHHHHhCcEEEEEeCCcHHHHHHHH
Confidence 45666666666666666666666555443
No 192
>PRK13551 agmatine deiminase; Provisional
Probab=23.37 E-value=2.4e+02 Score=24.03 Aligned_cols=80 Identities=10% Similarity=0.025 Sum_probs=47.7
Q ss_pred HHHHHHHHHHH-CCCCeEEEecchHHHhhhcccccChhHHHHHHHHhhcCCccCCeEEEEecC----CCccCHHHHHHHH
Q 046779 31 TKAKIRRAVEA-ERIPYTYVASNFFAGLYLSIIFNKEDDIGINSIKAVDDPRTLNKILYIRPR----CNIYSFNDLVSLW 105 (183)
Q Consensus 31 ~k~~i~~~l~~-~gi~~T~i~~g~F~~~~~~~~~t~~~Dia~~va~~l~~p~~~~~~~~v~~~----~~~~T~~ev~~~~ 105 (183)
.|.++++.|++ .|++-.+..++-... .-+--+++.+|+|+. | +..+..... ...--.+++.+.+
T Consensus 181 s~~~ie~~Lk~~LGv~kvIWL~~g~~~---DdTdGHiD~~arFv~-----~---~~vl~~~~~d~~d~~~~~~~~~~~~L 249 (362)
T PRK13551 181 TKEQIEQLLRDYLGVEKVIWLPDGIYN---DETDGHVDNVCCFVR-----P---GEVALAWTDDENDPQYARSKAALEVL 249 (362)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCC---CCCCcchhheEEeeC-----C---CEEEEEecCCCCCccHHHHHHHHHHH
Confidence 48899999998 899977766543321 134457778888873 1 222222100 0111245555566
Q ss_pred HH---HhCCceeEEeCCHH
Q 046779 106 EE---KIGKALDRVYVTEE 121 (183)
Q Consensus 106 ~~---~~G~~~~~~~~s~~ 121 (183)
++ +.|+++++..++..
T Consensus 250 ~~~~da~G~~~~i~~lP~P 268 (362)
T PRK13551 250 ENTTDAKGRKLKVHKLPIP 268 (362)
T ss_pred HhhhhccCCccEEEEecCC
Confidence 65 46899999887554
No 193
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=23.10 E-value=3.1e+02 Score=21.58 Aligned_cols=73 Identities=15% Similarity=0.122 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .||....|.||+...... | -.+.+.+|||..++-.+.++. .
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~ 239 (262)
T PRK07984 160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG 239 (262)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence 3678877766654 478889999997632110 1 234678999999998887643 2
Q ss_pred -CCeEEEEecCCCccCHHHH
Q 046779 83 -LNKILYIRPRCNIYSFNDL 101 (183)
Q Consensus 83 -~~~~~~v~~~~~~~T~~ev 101 (183)
.++.+.+.|+-...+++|+
T Consensus 240 itG~~i~vdgg~~~~~~~~~ 259 (262)
T PRK07984 240 ISGEVVHVDGGFSIAAMNEL 259 (262)
T ss_pred ccCcEEEECCCccccccchh
Confidence 3566666643233445543
No 194
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=23.00 E-value=2.4e+02 Score=21.72 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----c-------------ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----S-------------IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----~-------------~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .++..+.|+||++..-.. + -.+.+.+|+|+++..++.++. .
T Consensus 161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 240 (256)
T PRK06124 161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASY 240 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence 3556665555443 589999999998753211 1 235778999999999887654 2
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 241 ~~G~~i~~d 249 (256)
T PRK06124 241 VNGHVLAVD 249 (256)
T ss_pred cCCCEEEEC
Confidence 24556665
No 195
>PRK12743 oxidoreductase; Provisional
Probab=22.90 E-value=3.6e+02 Score=20.79 Aligned_cols=62 Identities=15% Similarity=-0.018 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh---------------c-ccccChhHHHHHHHHhhcCCc-c-C
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL---------------S-IIFNKEDDIGINSIKAVDDPR-T-L 83 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~---------------~-~~~t~~~Dia~~va~~l~~p~-~-~ 83 (183)
...|..++.+.++ .++..+.|+||+...-+. + -.+.+.+|+|..+.-++.++. . .
T Consensus 154 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 233 (256)
T PRK12743 154 TAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTT 233 (256)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcC
Confidence 4667777666543 479999999998642110 0 235688999999988887554 2 2
Q ss_pred CeEEEEe
Q 046779 84 NKILYIR 90 (183)
Q Consensus 84 ~~~~~v~ 90 (183)
+..+.+.
T Consensus 234 G~~~~~d 240 (256)
T PRK12743 234 GQSLIVD 240 (256)
T ss_pred CcEEEEC
Confidence 4556665
No 196
>PRK12747 short chain dehydrogenase; Provisional
Probab=22.83 E-value=3.3e+02 Score=20.84 Aligned_cols=63 Identities=14% Similarity=0.082 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHHH-------CCCCeEEEecchHHHhh----hc--------------ccccChhHHHHHHHHhhcCCc-
Q 046779 28 SFATKAKIRRAVEA-------ERIPYTYVASNFFAGLY----LS--------------IIFNKEDDIGINSIKAVDDPR- 81 (183)
Q Consensus 28 ~~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~----~~--------------~~~t~~~Dia~~va~~l~~p~- 81 (183)
....|..++...+. .|+....|.||+...-+ .. -.+.+.+|||.+++-++.+..
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 237 (252)
T PRK12747 158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSR 237 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCcccc
Confidence 34678877766554 58999999999874211 11 124678899999988776433
Q ss_pred c-CCeEEEEe
Q 046779 82 T-LNKILYIR 90 (183)
Q Consensus 82 ~-~~~~~~v~ 90 (183)
. .++.+.+.
T Consensus 238 ~~~G~~i~vd 247 (252)
T PRK12747 238 WVTGQLIDVS 247 (252)
T ss_pred CcCCcEEEec
Confidence 2 24555555
No 197
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=22.79 E-value=1.2e+02 Score=21.23 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=23.5
Q ss_pred cCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeC-CHHHH
Q 046779 82 TLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYV-TEEQL 123 (183)
Q Consensus 82 ~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~-s~~~~ 123 (183)
..|+.+|=+..+..+|..++.+++.+ |.+|.|.+. +-+++
T Consensus 6 Y~NRRLYDT~tS~YITLedi~~lV~~--g~~f~V~DakTgeDi 46 (107)
T TIGR01848 6 YPNRRLYDTETSSYVTLEDIRDLVRE--GREFQVVDSKSGDDL 46 (107)
T ss_pred cCCCcccCCCccceeeHHHHHHHHHC--CCeEEEEECCCCchh
Confidence 34555554444567777777777654 667766644 34444
No 198
>PRK08267 short chain dehydrogenase; Provisional
Probab=22.75 E-value=2.7e+02 Score=21.48 Aligned_cols=51 Identities=25% Similarity=0.173 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhhc--------------ccccChhHHHHHHHHhhcC
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYLS--------------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~~--------------~~~t~~~Dia~~va~~l~~ 79 (183)
...|..++.+.+. .++.++.|+||+....+.. ....+.+|+|+++..++.+
T Consensus 150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~ 221 (260)
T PRK08267 150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQH 221 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhC
Confidence 3566655544433 5899999999997543211 1124456666666666643
No 199
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=22.20 E-value=1.1e+02 Score=19.39 Aligned_cols=42 Identities=24% Similarity=0.345 Sum_probs=28.7
Q ss_pred cCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeC-CHHHHHH
Q 046779 82 TLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYV-TEEQLLK 125 (183)
Q Consensus 82 ~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~-s~~~~~~ 125 (183)
..|+.+|=...+..+|..++++++.+ |.+|.|.+. +-+++-.
T Consensus 6 Y~NRRLYDT~~s~YiTL~di~~lV~~--g~~~~V~D~ktgeDiT~ 48 (64)
T PF07879_consen 6 YPNRRLYDTETSSYITLEDIAQLVRE--GEDFKVVDAKTGEDITR 48 (64)
T ss_pred cCCCccccCCCceeEeHHHHHHHHHC--CCeEEEEECCCCcccHH
Confidence 45665655544678899999998875 888888754 4455543
No 200
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=21.96 E-value=2.6e+02 Score=21.50 Aligned_cols=62 Identities=8% Similarity=-0.109 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHH--hh---hc-----------------------ccccChhHHHHHH
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAG--LY---LS-----------------------IIFNKEDDIGINS 73 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~--~~---~~-----------------------~~~t~~~Dia~~v 73 (183)
...|..++.+.+ ..|+....|++|+..+ ++ .+ -.+.+.+||+.++
T Consensus 155 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~ 234 (259)
T PRK12384 155 SAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNML 234 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHH
Confidence 355666544433 3689999999996432 10 00 2356788999999
Q ss_pred HHhhcCCc-c-CCeEEEEe
Q 046779 74 IKAVDDPR-T-LNKILYIR 90 (183)
Q Consensus 74 a~~l~~p~-~-~~~~~~v~ 90 (183)
...+.+.. . .++.+.+.
T Consensus 235 ~~l~~~~~~~~~G~~~~v~ 253 (259)
T PRK12384 235 LFYASPKASYCTGQSINVT 253 (259)
T ss_pred HHHcCcccccccCceEEEc
Confidence 88877543 2 34566665
No 201
>PRK07832 short chain dehydrogenase; Provisional
Probab=21.79 E-value=1.5e+02 Score=23.24 Aligned_cols=16 Identities=13% Similarity=0.025 Sum_probs=13.2
Q ss_pred HCCCCeEEEecchHHH
Q 046779 41 AERIPYTYVASNFFAG 56 (183)
Q Consensus 41 ~~gi~~T~i~~g~F~~ 56 (183)
..+|.++.|+||+...
T Consensus 171 ~~~i~v~~v~Pg~v~t 186 (272)
T PRK07832 171 RHGIGVSVVVPGAVKT 186 (272)
T ss_pred hcCcEEEEEecCcccC
Confidence 4689999999998753
No 202
>PF13531 SBP_bac_11: Bacterial extracellular solute-binding protein; PDB: 2HXW_B 3FJG_C 3FJM_B 3FJ7_B 3FIR_B 3AXF_C 1WOD_A 1AMF_A 3R26_A 1SBP_A ....
Probab=21.68 E-value=1.6e+02 Score=22.44 Aligned_cols=37 Identities=14% Similarity=0.321 Sum_probs=30.0
Q ss_pred ccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHcC
Q 046779 95 IYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEAS 131 (183)
Q Consensus 95 ~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~~ 131 (183)
.-.++++++.+++.+|.++++...+..++..++....
T Consensus 10 ~~~~~~l~~~f~~~~g~~v~v~~~~s~~~~~~l~~g~ 46 (230)
T PF13531_consen 10 APALEELAEAFEKQPGIKVEVSFGGSGELVRRLQAGK 46 (230)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHhccCCeEEEEECChHHHHHHHhcCC
Confidence 3357899999998999999999999988888886543
No 203
>PRK06101 short chain dehydrogenase; Provisional
Probab=21.64 E-value=1.7e+02 Score=22.50 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHH-------HCCCCeEEEecchHHHhhhc------ccccChhHHHHHHHHhhcC
Q 046779 29 FATKAKIRRAVE-------AERIPYTYVASNFFAGLYLS------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 29 ~~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~~~------~~~t~~~Dia~~va~~l~~ 79 (183)
...|..++...+ ..|+.++.++||+-..-+.. ....+.+|+|+.+.+++..
T Consensus 142 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 142 GASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFAMPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCCCCcccCHHHHHHHHHHHHhc
Confidence 466777666543 46899999999986532211 1235778888888877764
No 204
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=21.63 E-value=3.1e+02 Score=21.19 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhh----h-------------c-ccccChhHHHHHHHHhhcCCc-c
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLY----L-------------S-IIFNKEDDIGINSIKAVDDPR-T 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~----~-------------~-~~~t~~~Dia~~va~~l~~p~-~ 82 (183)
...|..++.+.+. .||....|.||+...-+ . | -.+.+.+|||.+++-++.+.. .
T Consensus 157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~ 236 (251)
T PRK12481 157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDY 236 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 4677777666553 58999999999874211 0 0 125688999999998887643 2
Q ss_pred -CCeEEEEe
Q 046779 83 -LNKILYIR 90 (183)
Q Consensus 83 -~~~~~~v~ 90 (183)
.++.+.+.
T Consensus 237 ~~G~~i~vd 245 (251)
T PRK12481 237 VTGYTLAVD 245 (251)
T ss_pred cCCceEEEC
Confidence 34566665
No 205
>PRK07024 short chain dehydrogenase; Provisional
Probab=21.51 E-value=1.6e+02 Score=22.82 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=31.8
Q ss_pred HHHHHHHHHHH-------HHCCCCeEEEecchHHHhhhc------ccccChhHHHHHHHHhhcC
Q 046779 29 FATKAKIRRAV-------EAERIPYTYVASNFFAGLYLS------IIFNKEDDIGINSIKAVDD 79 (183)
Q Consensus 29 ~~~k~~i~~~l-------~~~gi~~T~i~~g~F~~~~~~------~~~t~~~Dia~~va~~l~~ 79 (183)
...|..++... +..|+.++.|+||+...-... ..+.+.+++|+.+..++.+
T Consensus 152 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 215 (257)
T PRK07024 152 SASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYPMPFLMDADRFAARAARAIAR 215 (257)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCCCCCccCHHHHHHHHHHHHhC
Confidence 35666665554 346899999999987432211 1125667777777777753
No 206
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=21.01 E-value=2.1e+02 Score=21.63 Aligned_cols=61 Identities=10% Similarity=0.041 Sum_probs=38.6
Q ss_pred HHHHHHHHHHH-------HCCCCeEEEecchHHHhh-----hc-------------ccccChhHHHHHHHHhhcCCc-c-
Q 046779 30 ATKAKIRRAVE-------AERIPYTYVASNFFAGLY-----LS-------------IIFNKEDDIGINSIKAVDDPR-T- 82 (183)
Q Consensus 30 ~~k~~i~~~l~-------~~gi~~T~i~~g~F~~~~-----~~-------------~~~t~~~Dia~~va~~l~~p~-~- 82 (183)
..|..++.+.+ ..|+..+.|+||+...-+ .+ -.+.+.+|+|.++..++.++. .
T Consensus 142 ~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~ 221 (235)
T PRK06550 142 ASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYM 221 (235)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccC
Confidence 45666554443 358999999999874211 00 126788999999998887643 2
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.+..+.+-
T Consensus 222 ~g~~~~~~ 229 (235)
T PRK06550 222 QGTIVPID 229 (235)
T ss_pred CCcEEEEC
Confidence 34555554
No 207
>PRK05529 cell division protein FtsQ; Provisional
Probab=20.87 E-value=3e+02 Score=22.08 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=38.9
Q ss_pred hcCCccCCeEEEEecCCCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHc
Q 046779 77 VDDPRTLNKILYIRPRCNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEA 130 (183)
Q Consensus 77 l~~p~~~~~~~~v~~~~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~ 130 (183)
+..|-..=+.+.|.|. +.+|.+||.+.+.-..|..+ ..++.+++++.+...
T Consensus 56 ~~Sp~~~v~~I~V~Gn-~~vs~~eI~~~~~~~~g~~l--~~vd~~~~~~~l~~~ 106 (255)
T PRK05529 56 AYSPLLALRSIEVAGN-MRVKPQDIVAALRDQFGKPL--PLVDPETVRKKLAAF 106 (255)
T ss_pred eeCCceEEEEEEEECC-ccCCHHHHHHHhcccCCCcc--eeECHHHHHHHHhcC
Confidence 3456544477899976 78999999999887788774 567888898888654
No 208
>cd03735 SOCS_SOCS1 SOCS (suppressors of cytokine signaling) box of SOCS1-like proteins. Together with CIS1, the CIS/SOCS family of proteins is characterized by the presence of a C-terminal SOCS box and a central SH2 domain. SOCS1, like CIS1 and SOCS3, is involved in the down-regulation of the JAK/STAT pathway. SOCS1 has a dual function as a direct potent JAK kinase inhibitor and as a component of an E3 ubiquitin-ligase complex recruiting substrates to the protein degradation machinery.
Probab=20.77 E-value=42 Score=19.37 Aligned_cols=11 Identities=27% Similarity=0.712 Sum_probs=9.4
Q ss_pred ccCHHHHHHhh
Q 046779 172 YTTVDEYLNQF 182 (183)
Q Consensus 172 ~~t~~e~l~~~ 182 (183)
|.++++||++|
T Consensus 29 P~~LKdyL~~y 39 (43)
T cd03735 29 NPVLKDYLKSF 39 (43)
T ss_pred CHHHHHHHHhC
Confidence 57899999986
No 209
>PRK06114 short chain dehydrogenase; Provisional
Probab=20.52 E-value=2.5e+02 Score=21.70 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh----------------c-ccccChhHHHHHHHHhhcCCc-c-
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL----------------S-IIFNKEDDIGINSIKAVDDPR-T- 82 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~----------------~-~~~t~~~Dia~~va~~l~~p~-~- 82 (183)
...|..++.+.+. .|+....|.||+...-+. | --+.+.+|||..++-++++.. +
T Consensus 161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~ 240 (254)
T PRK06114 161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFC 240 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 3566655554443 589999999998632111 0 124677899998888887643 2
Q ss_pred CCeEEEEe
Q 046779 83 LNKILYIR 90 (183)
Q Consensus 83 ~~~~~~v~ 90 (183)
.++.+.+-
T Consensus 241 tG~~i~~d 248 (254)
T PRK06114 241 TGVDLLVD 248 (254)
T ss_pred CCceEEEC
Confidence 34566665
No 210
>PRK14830 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.39 E-value=3e+02 Score=22.16 Aligned_cols=65 Identities=20% Similarity=0.173 Sum_probs=38.3
Q ss_pred hHHHHHHHHhhcCCc-cCCeEEEEecCCCccCHHHHHHHHHHHh----CCceeEEeCCHHHHHHHHHHcCCC
Q 046779 67 DDIGINSIKAVDDPR-TLNKILYIRPRCNIYSFNDLVSLWEEKI----GKALDRVYVTEEQLLKNIQEASYP 133 (183)
Q Consensus 67 ~Dia~~va~~l~~p~-~~~~~~~v~~~~~~~T~~ev~~~~~~~~----G~~~~~~~~s~~~~~~~~~~~~~p 133 (183)
.++.+.+..+-.... ..+-.++++ -..-+-+||++++.++. ...+....++.+.+.+.+...+.|
T Consensus 123 ~~~~~~~~~~e~~T~~~~~~~Lnia--~~YggR~EI~~A~~~~~~~v~~g~l~~~~I~e~~i~~~L~~~~~p 192 (251)
T PRK14830 123 EHTLRALEKAIEKTKNNTGLILNFA--LNYGGRAEIVSAVKEIAKDVLDGKLNPEDITEELISNYLMTKGLP 192 (251)
T ss_pred HHHHHHHHHHHHHccCCCceEEEEE--ecCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHHhCcCCCC
Confidence 345444444432222 234567777 56777889998877653 234444567777777777554444
No 211
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.36 E-value=3.1e+02 Score=21.12 Aligned_cols=62 Identities=18% Similarity=0.058 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHH-------CCCCeEEEecchHHHhhh-----c----------------ccccChhHHHHHHHHhhcCC
Q 046779 29 FATKAKIRRAVEA-------ERIPYTYVASNFFAGLYL-----S----------------IIFNKEDDIGINSIKAVDDP 80 (183)
Q Consensus 29 ~~~k~~i~~~l~~-------~gi~~T~i~~g~F~~~~~-----~----------------~~~t~~~Dia~~va~~l~~p 80 (183)
...|..++.+.+. .|+..+.|.||++..-+. + -.+.+.+|+|+.+..++.++
T Consensus 153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 232 (255)
T PRK06463 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDD 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChh
Confidence 3677777666554 479999999998731110 0 12467899999999988765
Q ss_pred c-c-CCeEEEEe
Q 046779 81 R-T-LNKILYIR 90 (183)
Q Consensus 81 ~-~-~~~~~~v~ 90 (183)
. . .++.+.+.
T Consensus 233 ~~~~~G~~~~~d 244 (255)
T PRK06463 233 ARYITGQVIVAD 244 (255)
T ss_pred hcCCCCCEEEEC
Confidence 4 2 34566665
No 212
>COG0725 ModA ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=20.32 E-value=2e+02 Score=23.20 Aligned_cols=38 Identities=11% Similarity=0.264 Sum_probs=33.4
Q ss_pred CCccCHHHHHHHHHHHhCCceeEEeCCHHHHHHHHHHc
Q 046779 93 CNIYSFNDLVSLWEEKIGKALDRVYVTEEQLLKNIQEA 130 (183)
Q Consensus 93 ~~~~T~~ev~~~~~~~~G~~~~~~~~s~~~~~~~~~~~ 130 (183)
|-+-.++|+...+++.+|.++.+.+-+.-++.+++.+.
T Consensus 39 SL~~~l~~i~~~F~~~~~~~V~~~f~gS~~l~~qIe~G 76 (258)
T COG0725 39 SLTDALEEIAKQFEKETGVKVEVEFGGSGALARQIEQG 76 (258)
T ss_pred hhHHHHHHHHHHHHHHHCCeEEEEecchHHHHHHHHcC
Confidence 45666889999999999999999999999999998764
No 213
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=20.30 E-value=75 Score=19.63 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=9.5
Q ss_pred HHHHHhCCceeEEeCC
Q 046779 104 LWEEKIGKALDRVYVT 119 (183)
Q Consensus 104 ~~~~~~G~~~~~~~~s 119 (183)
.+++++|+++++...+
T Consensus 1 A~e~vtG~~i~~~~~~ 16 (62)
T PF13950_consen 1 AFEKVTGKKIPVEYAP 16 (62)
T ss_dssp HHHHHHTS---EEEE-
T ss_pred CcHHHHCCCCCceECC
Confidence 4788999999887654
No 214
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=20.26 E-value=1.2e+02 Score=16.09 Aligned_cols=17 Identities=6% Similarity=-0.011 Sum_probs=13.5
Q ss_pred CCccCHHHHHHHHHHHh
Q 046779 93 CNIYSFNDLVSLWEEKI 109 (183)
Q Consensus 93 ~~~~T~~ev~~~~~~~~ 109 (183)
+..+|..|+.++++++.
T Consensus 2 ~~~i~~~~~~d~a~rv~ 18 (33)
T PF09373_consen 2 SGTISKEEYLDMASRVN 18 (33)
T ss_pred CceecHHHHHHHHHHHH
Confidence 35788999999888873
No 215
>PF09585 Lin0512_fam: Conserved hypothetical protein (Lin0512_fam); InterPro: IPR011719 This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N terminus.
Probab=20.18 E-value=94 Score=21.96 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=23.5
Q ss_pred eEeccCCCCCCCCcchhhhhchhhHHHHHHHHHHHHHCCCC
Q 046779 5 QRFFPSEFGNDVDRVHAVELARTSFATKAKIRRAVEAERIP 45 (183)
Q Consensus 5 krFiPSefg~~~~~~~~~~~~~~~~~~k~~i~~~l~~~gi~ 45 (183)
||||- |||+-.+.+. ....-+.+++++++|..+.|+
T Consensus 1 kr~~i-E~GmG~DlhG----qD~TkAA~RAv~DAI~~nslp 36 (113)
T PF09585_consen 1 KRLFI-EMGMGNDLHG----QDYTKAAVRAVRDAISHNSLP 36 (113)
T ss_pred CeEEE-EecccccccC----CcHHHHHHHHHHHHHhhcchH
Confidence 45553 7787665432 112347789999999988775
No 216
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.08 E-value=1.2e+02 Score=26.22 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHH---CCCCeEEEecchHH
Q 046779 29 FATKAKIRRAVEA---ERIPYTYVASNFFA 55 (183)
Q Consensus 29 ~~~k~~i~~~l~~---~gi~~T~i~~g~F~ 55 (183)
-..|...|..+++ .|++.|++|||+-.
T Consensus 169 ~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~ 198 (382)
T COG3320 169 GRSKWVAEKLVREAGDRGLPVTIFRPGYIT 198 (382)
T ss_pred chhHHHHHHHHHHHhhcCCCeEEEecCeee
Confidence 4788888888887 58999999999753
Done!