Query 046780
Match_columns 290
No_of_seqs 281 out of 1849
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:11:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.4E-65 4.6E-70 476.8 20.8 261 29-290 3-278 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.8E-58 1.7E-62 419.2 18.7 223 63-290 3-238 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 2.5E-58 8.4E-63 422.0 15.4 216 65-290 2-224 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 9.1E-56 3.1E-60 403.9 15.1 212 65-290 3-233 (311)
5 1odm_A Isopenicillin N synthas 100.0 6.2E-55 2.1E-59 401.7 18.2 216 64-290 6-260 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.2E-54 4E-59 391.0 16.0 208 65-290 2-221 (280)
7 3dkq_A PKHD-type hydroxylase S 69.3 12 0.00042 31.9 7.0 59 223-287 100-175 (243)
8 3itq_A Prolyl 4-hydroxylase, a 57.3 21 0.00072 29.7 6.1 71 198-283 95-179 (216)
9 2dbn_A Hypothetical protein YB 55.6 5.5 0.00019 37.2 2.4 55 63-123 97-151 (461)
10 2jig_A Prolyl-4 hydroxylase; h 47.9 33 0.0011 28.3 5.9 15 269-283 170-184 (224)
11 1m5a_B Insulin B chain; alpha 44.1 22 0.00076 19.9 2.7 19 83-101 9-27 (30)
12 2opi_A L-fuculose-1-phosphate 41.0 11 0.00038 31.1 1.8 36 66-106 125-160 (212)
13 2x4k_A 4-oxalocrotonate tautom 40.4 29 0.001 21.7 3.6 24 190-213 18-41 (63)
14 2do1_A Nuclear protein HCC-1; 40.2 36 0.0012 21.9 3.8 39 69-119 7-45 (55)
15 3o2g_A Gamma-butyrobetaine dio 38.7 15 0.00053 33.3 2.5 52 66-124 122-173 (388)
16 3jsy_A Acidic ribosomal protei 38.3 50 0.0017 27.3 5.5 41 80-120 3-44 (213)
17 4ay7_A Methylcobalamin\: coenz 38.2 54 0.0018 28.9 6.1 41 83-123 304-348 (348)
18 2fk5_A Fuculose-1-phosphate al 35.9 19 0.00065 29.5 2.4 36 66-106 117-153 (200)
19 3abf_A 4-oxalocrotonate tautom 34.9 41 0.0014 21.3 3.6 23 191-213 17-39 (64)
20 1e4c_P L-fuculose 1-phosphate 34.5 16 0.00055 30.2 1.8 36 66-106 122-157 (215)
21 1otf_A 4-oxalocrotonate tautom 33.8 43 0.0015 21.0 3.5 24 190-213 15-38 (62)
22 2opa_A Probable tautomerase YW 33.8 44 0.0015 20.9 3.6 24 190-213 15-38 (61)
23 2irp_A Putative aldolase class 32.9 25 0.00085 28.8 2.7 51 65-121 138-193 (208)
24 2ww6_A Fibritin, T4 fibritin; 31.8 32 0.0011 18.6 2.0 14 260-273 11-24 (27)
25 1pvt_A Sugar-phosphate aldolas 31.4 22 0.00074 29.9 2.2 50 66-120 161-212 (238)
26 2da7_A Zinc finger homeobox pr 29.4 16 0.00056 24.9 0.8 39 179-217 15-53 (71)
27 1oih_A Putative alkylsulfatase 28.4 62 0.0021 27.8 4.7 52 65-124 26-78 (301)
28 2qt7_A Receptor-type tyrosine- 28.2 31 0.0011 24.7 2.1 32 195-226 19-51 (91)
29 3ry0_A Putative tautomerase; o 28.0 61 0.0021 20.7 3.6 25 189-213 14-38 (65)
30 2j01_J 50S ribosomal protein L 27.6 1.3E+02 0.0044 23.8 6.1 40 81-120 5-46 (173)
31 1otj_A Alpha-ketoglutarate-dep 27.5 67 0.0023 27.3 4.7 53 64-124 15-67 (283)
32 2v9l_A Rhamnulose-1-phosphate 27.1 24 0.00081 30.4 1.6 51 66-121 179-231 (274)
33 1zav_A 50S ribosomal protein L 26.4 1.3E+02 0.0045 23.9 6.0 41 80-120 6-47 (180)
34 3m21_A Probable tautomerase HP 25.8 71 0.0024 20.6 3.6 25 189-213 17-41 (67)
35 3ocr_A Class II aldolase/adduc 24.9 30 0.001 29.8 1.9 51 66-120 156-208 (273)
36 3m20_A 4-oxalocrotonate tautom 24.5 65 0.0022 20.5 3.1 24 190-213 14-37 (62)
37 1gyx_A YDCE, B1461, hypothetic 24.4 74 0.0025 21.2 3.5 24 190-213 16-39 (76)
38 3mb2_A 4-oxalocrotonate tautom 24.4 73 0.0025 20.9 3.5 25 189-213 15-39 (72)
39 3pvj_A Alpha-ketoglutarate-dep 24.0 78 0.0027 27.0 4.4 53 64-124 13-65 (277)
40 2nys_A AGR_C_3712P; SSPB, stri 23.7 85 0.0029 25.2 4.1 62 189-267 14-81 (176)
41 3r1j_A Alpha-ketoglutarate-dep 23.0 99 0.0034 26.8 4.9 53 64-124 19-72 (301)
42 4hti_A Receptor-type tyrosine- 22.5 49 0.0017 24.0 2.3 33 195-227 26-59 (99)
43 3u5i_q A0, L10E, 60S acidic ri 21.5 1.3E+02 0.0043 26.5 5.3 41 80-120 6-47 (312)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.4e-65 Score=476.78 Aligned_cols=261 Identities=26% Similarity=0.501 Sum_probs=225.4
Q ss_pred cccchHHHHhCCCCCCCCeeecCCCCCCCCCC---CC---CCCCcceeeCCCCC-CChHHHHHHHHHHHHHHHhcceeEE
Q 046780 29 TKAGVKGLVDAGITKIPRIFIHDQLKLSNSRS---GD---SEFIIPILDLDGVN-KDAISRAKIVKQVQNACQNWGFFQI 101 (290)
Q Consensus 29 ~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~---~~---~~~~iPvIDls~l~-~~~~~~~~~~~~l~~A~~~~GFF~l 101 (290)
..++||+|+++|+.+||++|++|+++++.... .. ...+||||||+.+. +++..|.+++++|++||++||||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 45789999999999999999999887775311 00 12469999999986 4566788899999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHHHhccCCHHHHhhhhcccc-cCCceecccccccCCCCCCcccccccccccCCC-CCCCCCc--
Q 046780 102 VNHGIPVSILDEMIDGVIGFHEQDTEVKKKFYTRDY-QKRMVLYNTNFDFYVAPEANWRDTLSCVMAPNP-PDPEELP-- 177 (290)
Q Consensus 102 ~nHGi~~~~~~~~~~~~~~FF~LP~eeK~~~~~~~~-~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~~P-- 177 (290)
+||||+.++++++++.+++||+||.|+|+++..... .. ..||+........+..||+|.|.+...|.. ..++.||
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~-~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK-IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB-CSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccC-ccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence 999999999999999999999999999999865443 34 789987765555677899999998765531 1122343
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhccc---CCCccccccccCCCCCCCCCCCCcccccCCCeeEE
Q 046780 178 -EVCRDIIVDYAKKTTELALTLFELISEALGLNANRLKDMDC---AEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVL 253 (290)
Q Consensus 178 -~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~yYPp~~~~~~~~g~~~HtD~g~lTlL 253 (290)
+.||+++++|+++|.+|+.+||++|+++|||++++|.+.+. ...+.+|+||||||++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 58999999999999999999999999999999999998765 46678999999999999999999999999999999
Q ss_pred ecCCCCCeEEeeCCcEEEeccCCCcEEEecCcccccC
Q 046780 254 LQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQAS 290 (290)
Q Consensus 254 ~qd~v~GLQV~~~g~W~~V~p~pgalvVNiGD~Lei~ 290 (290)
+||+++||||+++|+|++|+|+||+|||||||+||++
T Consensus 242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~ 278 (356)
T 1gp6_A 242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEIL 278 (356)
T ss_dssp EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHh
Confidence 9999999999999999999999999999999999973
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.8e-58 Score=419.24 Aligned_cols=223 Identities=19% Similarity=0.240 Sum_probs=187.6
Q ss_pred CCCCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccCCHHHHhhhhcccccCCce
Q 046780 63 SEFIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQDTEVKKKFYTRDYQKRMV 142 (290)
Q Consensus 63 ~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~~ 142 (290)
++.+||||||+.+. ..+++++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ... ..
T Consensus 3 ~~~~iPvIDls~~~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~-~~ 77 (312)
T 3oox_A 3 STSAIDPVSFSLYA---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGG-AR 77 (312)
T ss_dssp -CCSSCCEETHHHH---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGG-TS
T ss_pred CCCCCCeEEChHhc---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCC-cc
Confidence 45679999999874 25778999999999999999999999999999999999999999999999998643 334 67
Q ss_pred eccccccc--CCCCCCccccccccccc-C-CC-----CCCCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Q 046780 143 LYNTNFDF--YVAPEANWRDTLSCVMA-P-NP-----PDPEELP---EVCRDIIVDYAKKTTELALTLFELISEALGLNA 210 (290)
Q Consensus 143 gy~~~~~~--~~~~~~d~~e~~~~~~~-p-~~-----~~~~~~P---~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 210 (290)
||...... ......||+|.|.+... + .. ..++.|| +.||+++++|+++|.+|+.+||++|+++||+++
T Consensus 78 Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 157 (312)
T 3oox_A 78 GYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 157 (312)
T ss_dssp EEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred ccccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 88653321 12346799999877431 1 11 1123454 579999999999999999999999999999999
Q ss_pred hhhhhcccCCCccccccccCCCCCCCCCCCCcccccCCCeeEEecCCCCCeEEe-eCCcEEEeccCCCcEEEecCccccc
Q 046780 211 NRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVL-HENEWVNVTPIYGALVVNLGDMMQA 289 (290)
Q Consensus 211 ~~~~~~~~~~~~~lr~~yYPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~W~~V~p~pgalvVNiGD~Lei 289 (290)
++|.+.+..+.+.+|+||||||++++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+
T Consensus 158 ~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 158 DFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp TTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHH
T ss_pred HHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHH
Confidence 999988777778899999999998765699999999999999999999999996 5799999999999999999999997
Q ss_pred C
Q 046780 290 S 290 (290)
Q Consensus 290 ~ 290 (290)
+
T Consensus 238 ~ 238 (312)
T 3oox_A 238 L 238 (312)
T ss_dssp H
T ss_pred H
Confidence 3
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.5e-58 Score=421.98 Aligned_cols=216 Identities=32% Similarity=0.586 Sum_probs=187.5
Q ss_pred CCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccCCHHHHhhhhcccccCCceec
Q 046780 65 FIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQDTEVKKKFYTRDYQKRMVLY 144 (290)
Q Consensus 65 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~~gy 144 (290)
.+||||||+.+. +..+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.. . ..||
T Consensus 2 ~~iPvIDls~l~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~-~----~~Gy 74 (319)
T 1w9y_A 2 ENFPIISLDKVN--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELV-A----SKAL 74 (319)
T ss_dssp CCCCEEEGGGGG--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----HHHH
T ss_pred CCCCEEECcccC--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcc-C----CCCC
Confidence 469999999874 34578899999999999999999999999999999999999999999999999742 1 3377
Q ss_pred ccccccCCCCCCcccccccccccCCCCCCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhcccC--
Q 046780 145 NTNFDFYVAPEANWRDTLSCVMAPNPPDPEEL---PEVCRDIIVDYAKKTTELALTLFELISEALGLNANRLKDMDCA-- 219 (290)
Q Consensus 145 ~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~---P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~-- 219 (290)
.... ...+..||+|.|.+...|.. .++.| |+.||+++++|+++|.+|+.+||++|+++|||++++|.+.+..
T Consensus 75 ~~~~--~e~~~~d~ke~~~~~~~p~~-~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~ 151 (319)
T 1w9y_A 75 EGVQ--AEVTDMDWESTFFLKHLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSK 151 (319)
T ss_dssp TTCC--CCGGGCCCCEEEEEEEESCC-GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTT
T ss_pred Cccc--ccCCCCChhhheeeecCCcc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcC
Confidence 5432 23456799999998766531 12234 3689999999999999999999999999999999999887542
Q ss_pred -CCccccccccCCCCCCCCCCCCcccccCCCeeEEecC-CCCCeEEeeCCcEEEeccCCCcEEEecCcccccC
Q 046780 220 -EGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQAS 290 (290)
Q Consensus 220 -~~~~lr~~yYPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~W~~V~p~pgalvVNiGD~Lei~ 290 (290)
..+.+|+||||||++|+..+|+++|||+|+||||+|| +++||||+++|+|++|+|+||++||||||+||++
T Consensus 152 ~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~ 224 (319)
T 1w9y_A 152 GPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVI 224 (319)
T ss_dssp CCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred CccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHH
Confidence 4568999999999999999999999999999999995 7999999999999999999999999999999973
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=9.1e-56 Score=403.88 Aligned_cols=212 Identities=17% Similarity=0.199 Sum_probs=171.5
Q ss_pred CCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccCC-HHHHhhhhcccccCCcee
Q 046780 65 FIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQD-TEVKKKFYTRDYQKRMVL 143 (290)
Q Consensus 65 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~LP-~eeK~~~~~~~~~~~~~g 143 (290)
.+||||||+.+.++ .. .++|++||++||||||+||||+.++++++++.+++||+|| .|+|+++....... ..|
T Consensus 3 ~~iPvIDls~l~~~-~~----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~-~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQG-LH----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTM-RRG 76 (311)
T ss_dssp CCCCEEEHHHHHTT-CS----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCS-SSE
T ss_pred CCCcEEEchhhcCC-CH----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCC-CCc
Confidence 46999999987411 11 1399999999999999999999999999999999999999 99999986544344 689
Q ss_pred ccccccc------CCCCCCcccccccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----Chhhh
Q 046780 144 YNTNFDF------YVAPEANWRDTLSCVMAPNPPDPEELPEVCRDIIVDYAKKTTELALTLFELISEALGL----NANRL 213 (290)
Q Consensus 144 y~~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~~~P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~~~ 213 (290)
|...... ...+..||+|.|.+...|+ .|| |+.||+++++|+++|.+|+.+||++|+++||| ++++|
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~~n-~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTADN-LFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp EEEC-----------------CEEEEECSSSC-CCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred eeeccccccccccCCCCCCCcceeeeccCCCC-CCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 9765432 2245789999999877654 233 57899999999999999999999999999999 88888
Q ss_pred hhcccCCCccccccccCCCCCCC--C--CCCCcccccCCCeeEEecC-CCCC---eEEeeCCcEEEeccCCCcEEEecCc
Q 046780 214 KDMDCAEGLFLLGHYYPTCPEPE--L--TMGTDSHADSSFLTVLLQD-RLGG---LQVLHENEWVNVTPIYGALVVNLGD 285 (290)
Q Consensus 214 ~~~~~~~~~~lr~~yYPp~~~~~--~--~~g~~~HtD~g~lTlL~qd-~v~G---LQV~~~g~W~~V~p~pgalvVNiGD 285 (290)
.+. .+.+|+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+||+|||||||
T Consensus 153 ~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD 228 (311)
T 1dcs_A 153 LDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGA 228 (311)
T ss_dssp HSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECH
T ss_pred hhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHH
Confidence 765 6689999999999874 3 6789999999999999999 8999 9999999999999999999999999
Q ss_pred ccccC
Q 046780 286 MMQAS 290 (290)
Q Consensus 286 ~Lei~ 290 (290)
+||++
T Consensus 229 ~l~~~ 233 (311)
T 1dcs_A 229 IATLV 233 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99973
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=6.2e-55 Score=401.68 Aligned_cols=216 Identities=19% Similarity=0.226 Sum_probs=184.1
Q ss_pred CCCcceeeCCCCC-CChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHh-ccCCHHHHhhhhcccccCCc
Q 046780 64 EFIIPILDLDGVN-KDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGF-HEQDTEVKKKFYTRDYQKRM 141 (290)
Q Consensus 64 ~~~iPvIDls~l~-~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~F-F~LP~eeK~~~~~~~~~~~~ 141 (290)
..+||||||+.|. +++..+.+++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------- 75 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------- 75 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------
Confidence 4579999999986 566778899999999999999999999999 999999999999 9999999999743
Q ss_pred eecccccc--cCC------CCCCcccccccccccCC-----------CCCCCCCc-----hhHHHHHHHHHHHHHHHHHH
Q 046780 142 VLYNTNFD--FYV------APEANWRDTLSCVMAPN-----------PPDPEELP-----EVCRDIIVDYAKKTTELALT 197 (290)
Q Consensus 142 ~gy~~~~~--~~~------~~~~d~~e~~~~~~~p~-----------~~~~~~~P-----~~fr~~~~~y~~~~~~l~~~ 197 (290)
.||..... ... .+..||+|.|++...+. ...++.|| +.||+++++|+++|.+|+.+
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 24432211 111 25679999998864311 01123343 47999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcccCCCcccc--ccccC------C---CCCCCC-CCCCcccccCCCeeEEecCCCCCeEEe-
Q 046780 198 LFELISEALGLNANRLKDMDCAEGLFLL--GHYYP------T---CPEPEL-TMGTDSHADSSFLTVLLQDRLGGLQVL- 264 (290)
Q Consensus 198 ll~~la~~Lgl~~~~~~~~~~~~~~~lr--~~yYP------p---~~~~~~-~~g~~~HtD~g~lTlL~qd~v~GLQV~- 264 (290)
||++|+++|||++++|.+.+....+.+| +|||| | |++|+. .+|+++|||+|+||||+||+++||||+
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 9999999999999999998777778899 99999 8 888887 899999999999999999999999999
Q ss_pred eCCcEEEeccCCCcEEEecCcccccC
Q 046780 265 HENEWVNVTPIYGALVVNLGDMMQAS 290 (290)
Q Consensus 265 ~~g~W~~V~p~pgalvVNiGD~Lei~ 290 (290)
++| |++|+|+||+|||||||+||++
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~ 260 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHL 260 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHH
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHH
Confidence 578 9999999999999999999973
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-54 Score=391.00 Aligned_cols=208 Identities=22% Similarity=0.311 Sum_probs=172.0
Q ss_pred CCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccCCHHHHhhhhcccccCCceec
Q 046780 65 FIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQDTEVKKKFYTRDYQKRMVLY 144 (290)
Q Consensus 65 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~~gy 144 (290)
.+||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||+| |+|+++.. +... ..||
T Consensus 2 ~~IPvIDls~~--------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~-~~~~-~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA--------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMF-NRET-HDGF 69 (280)
T ss_dssp --CCEEETTST--------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBC-CTTT-CCEE
T ss_pred CCCCEEECCCh--------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhcc-CCCC-CCcc
Confidence 36999999964 24689999999999999999999999999999999999998 89999753 3344 7899
Q ss_pred cccc-c--cCCCCCCcccccccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hh---hhhc
Q 046780 145 NTNF-D--FYVAPEANWRDTLSCVMAPNPPDPEELPEVCRDIIVDYAKKTTELALTLFELISEALGLNA--NR---LKDM 216 (290)
Q Consensus 145 ~~~~-~--~~~~~~~d~~e~~~~~~~p~~~~~~~~P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---~~~~ 216 (290)
.... . .......||+|.|.+. | ++ .+|+.||+++++|+++|.+|+.+||++|+++||++. ++ |.+.
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~--p---~~-~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~ 143 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY--P---WG-RIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEM 143 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC--T---TS-CCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHH
T ss_pred ccCccccccCCCCcccHHHHHhcC--C---CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHH
Confidence 7643 1 1123467999998763 3 22 467889999999999999999999999999999863 33 4444
Q ss_pred ccCCC-ccccccccCCCCCCC--CCCCCcccccCCCeeEEecCCCCCeEEee-CCcEEEeccCCCcEEEecCcccccC
Q 046780 217 DCAEG-LFLLGHYYPTCPEPE--LTMGTDSHADSSFLTVLLQDRLGGLQVLH-ENEWVNVTPIYGALVVNLGDMMQAS 290 (290)
Q Consensus 217 ~~~~~-~~lr~~yYPp~~~~~--~~~g~~~HtD~g~lTlL~qd~v~GLQV~~-~g~W~~V~p~pgalvVNiGD~Lei~ 290 (290)
+..+. +.+|+||||||+.++ ..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++||||||+||++
T Consensus 144 ~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 144 IANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp HTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHH
T ss_pred hcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHH
Confidence 44443 789999999999765 47899999999999999999999999984 7999999999999999999999963
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=69.35 E-value=12 Score=31.85 Aligned_cols=59 Identities=19% Similarity=0.120 Sum_probs=36.5
Q ss_pred cccccccCCCCCCCCCCCCcccccCC-----------CeeEEec--C----CCCCeEEeeCCcEEEeccCCCcEEEecCc
Q 046780 223 FLLGHYYPTCPEPELTMGTDSHADSS-----------FLTVLLQ--D----RLGGLQVLHENEWVNVTPIYGALVVNLGD 285 (290)
Q Consensus 223 ~lr~~yYPp~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~v~GLQV~~~g~W~~V~p~pgalvVNiGD 285 (290)
.++++.|.+-. -..+|.|.. .+|+++. + +-|.|.+.....=..|+|..|.+|+.-.+
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEETT
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECCC
Confidence 35677787631 246676652 4666664 3 12445555543347899999999987665
Q ss_pred cc
Q 046780 286 MM 287 (290)
Q Consensus 286 ~L 287 (290)
.+
T Consensus 174 ~l 175 (243)
T 3dkq_A 174 SL 175 (243)
T ss_dssp SE
T ss_pred Ce
Confidence 43
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=57.33 E-value=21 Score=29.74 Aligned_cols=71 Identities=21% Similarity=0.117 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCChhhhhhcccCCCccccccccCCCCCCCCCCCCcccccCC-----------CeeEEec--C-CCCCeEE
Q 046780 198 LFELISEALGLNANRLKDMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSS-----------FLTVLLQ--D-RLGGLQV 263 (290)
Q Consensus 198 ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~yYPp~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~v~GLQV 263 (290)
|.+-|+..+|++.+.. -.+++.+|.+.. -..+|.|.. .+|+|+. | ..||==+
T Consensus 95 i~~Ri~~~~gl~~~~~--------E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~ 160 (216)
T 3itq_A 95 IEKRISSIMNVPASHG--------EGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETF 160 (216)
T ss_dssp HHHHHHHHHTSCGGGB--------CCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEE
T ss_pred HHHHHHHhcCceeccc--------cceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeE
Confidence 3444444567763211 124566676531 145676653 3788875 2 2334333
Q ss_pred eeCCcEEEeccCCCcEEEec
Q 046780 264 LHENEWVNVTPIYGALVVNL 283 (290)
Q Consensus 264 ~~~g~W~~V~p~pgalvVNi 283 (290)
..+ .=+.|+|..|..|+.-
T Consensus 161 Fp~-~~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 161 FPK-LNLSVHPRKGMAVYFE 179 (216)
T ss_dssp ETT-TTEEECCCTTCEEEEE
T ss_pred ecC-CCCEEecCCCeEEEEe
Confidence 322 2378999999988854
No 9
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=55.65 E-value=5.5 Score=37.21 Aligned_cols=55 Identities=11% Similarity=0.258 Sum_probs=40.6
Q ss_pred CCCCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhcc
Q 046780 63 SEFIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHE 123 (290)
Q Consensus 63 ~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~ 123 (290)
....||.||++.+. ...+.++..+..++.|++.|.|. ||.+...+..+...+|.+
T Consensus 97 G~~~iP~i~f~di~-----~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIK-----AGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHH-----HTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhc-----CCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 34569999998763 11122455677889999988887 899988888888888754
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=47.94 E-value=33 Score=28.26 Aligned_cols=15 Identities=27% Similarity=0.355 Sum_probs=12.6
Q ss_pred EEEeccCCCcEEEec
Q 046780 269 WVNVTPIYGALVVNL 283 (290)
Q Consensus 269 W~~V~p~pgalvVNi 283 (290)
-+.|+|..|..|+.-
T Consensus 170 ~~~V~P~~G~al~f~ 184 (224)
T 2jig_A 170 GLAVKPIKGDALMFY 184 (224)
T ss_dssp SEEECCCTTCEEEEE
T ss_pred ceEEecccCcEEEEE
Confidence 489999999998864
No 11
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=44.09 E-value=22 Score=19.93 Aligned_cols=19 Identities=26% Similarity=0.600 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhcceeEE
Q 046780 83 AKIVKQVQNACQNWGFFQI 101 (290)
Q Consensus 83 ~~~~~~l~~A~~~~GFF~l 101 (290)
..+++.|.-.|.+-|||+-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4678899999999999983
No 12
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=41.01 E-value=11 Score=31.15 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=27.9
Q ss_pred CcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCC
Q 046780 66 IIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGI 106 (290)
Q Consensus 66 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi 106 (290)
.||++++.... ..++++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~g-----~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG-----SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT-----CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999986542 2356778888888888888999995
No 13
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=40.36 E-value=29 Score=21.71 Aligned_cols=24 Identities=13% Similarity=0.272 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 046780 190 KTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 190 ~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
+-++|+..|.+++++.||.+++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 346889999999999999998754
No 14
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=40.18 E-value=36 Score=21.88 Aligned_cols=39 Identities=13% Similarity=0.349 Sum_probs=28.6
Q ss_pred eeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHH
Q 046780 69 ILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVI 119 (290)
Q Consensus 69 vIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~ 119 (290)
++|++.+. +.+|.+.|+.+| +.-.|--.++++++.....
T Consensus 7 ~~~l~klk---------V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 7 GVELHKLK---------LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CCCTTTSC---------HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHCc---------HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 35666653 678999999999 4556777888888776544
No 15
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=38.67 E-value=15 Score=33.32 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=39.2
Q ss_pred CcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccC
Q 046780 66 IIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQ 124 (290)
Q Consensus 66 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~L 124 (290)
++|.||++.+. ...+.+.++.+|+.++|+..+.|-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l----~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVL----RYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHH----HCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHh----cCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 68999998653 22466789999999999999999888754 345567776554
No 16
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=38.26 E-value=50 Score=27.34 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 046780 80 ISRAKIVKQVQNACQNWGFFQIVN-HGIPVSILDEMIDGVIG 120 (290)
Q Consensus 80 ~~~~~~~~~l~~A~~~~GFF~l~n-HGi~~~~~~~~~~~~~~ 120 (290)
+.+.+.+++|.+.+.++..++|++ +|++...++++.+..|+
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456778889999999888888876 78888888887777664
No 17
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=38.24 E-value=54 Score=28.95 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCC----HHHHHHHHHHHHHhcc
Q 046780 83 AKIVKQVQNACQNWGFFQIVNHGIP----VSILDEMIDGVIGFHE 123 (290)
Q Consensus 83 ~~~~~~l~~A~~~~GFF~l~nHGi~----~~~~~~~~~~~~~FF~ 123 (290)
+++.+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4555666677778888777789976 5788999999999985
No 18
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=35.93 E-value=19 Score=29.49 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=27.3
Q ss_pred Cccee-eCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCC
Q 046780 66 IIPIL-DLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGI 106 (290)
Q Consensus 66 ~iPvI-Dls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi 106 (290)
.||++ ++.... ..++++.+.+++++.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA-----TEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS-----SHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC-----cHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 775432 2366778888888888899999994
No 19
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=34.89 E-value=41 Score=21.26 Aligned_cols=23 Identities=30% Similarity=0.317 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHcCCChhhh
Q 046780 191 TTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 191 ~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
-++|...|.+++++.||.+++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 46788899999999999998754
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=34.54 E-value=16 Score=30.22 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=27.7
Q ss_pred CcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCC
Q 046780 66 IIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGI 106 (290)
Q Consensus 66 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi 106 (290)
.||++++.... -.++++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~g-----~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG-----TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT-----CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 68999886542 1356778888888888888999995
No 21
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=33.81 E-value=43 Score=20.97 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 046780 190 KTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 190 ~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
+-++|+..|.+++.+.||++++..
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 446889999999999999997643
No 22
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=33.81 E-value=44 Score=20.90 Aligned_cols=24 Identities=17% Similarity=0.342 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 046780 190 KTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 190 ~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
+-++|+..|.+++.+.||++++..
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeE
Confidence 446889999999999999997643
No 23
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=32.85 E-value=25 Score=28.79 Aligned_cols=51 Identities=22% Similarity=0.248 Sum_probs=33.3
Q ss_pred CCcceeeCCCCCCChHHHHHHHHHHHHHHHhcc---eeEEecCCCC--HHHHHHHHHHHHHh
Q 046780 65 FIIPILDLDGVNKDAISRAKIVKQVQNACQNWG---FFQIVNHGIP--VSILDEMIDGVIGF 121 (290)
Q Consensus 65 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~G---FF~l~nHGi~--~~~~~~~~~~~~~F 121 (290)
..||+++.. . ..+++++.+.+++.+.+ .+.+.|||+= -+.+++++..+..+
T Consensus 138 ~~vp~~~~~-~-----g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~l 193 (208)
T 2irp_A 138 IKIPIFPNE-Q-----NIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEAL 193 (208)
T ss_dssp CEEEEECCC-S-----CHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHHH
T ss_pred cceeeecCC-C-----CHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHHH
Confidence 368998764 1 23567888888988875 7888999953 23445555544443
No 24
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=31.78 E-value=32 Score=18.61 Aligned_cols=14 Identities=29% Similarity=0.380 Sum_probs=10.8
Q ss_pred CeEEeeCCcEEEec
Q 046780 260 GLQVLHENEWVNVT 273 (290)
Q Consensus 260 GLQV~~~g~W~~V~ 273 (290)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35688999999754
No 25
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=31.45 E-value=22 Score=29.88 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=33.8
Q ss_pred CcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCC--HHHHHHHHHHHHH
Q 046780 66 IIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIP--VSILDEMIDGVIG 120 (290)
Q Consensus 66 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~--~~~~~~~~~~~~~ 120 (290)
.||++++.... ..++++.+.+++++.-.+.+.|||+= -+.+++++..+..
T Consensus 161 ~v~~~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 212 (238)
T 1pvt_A 161 GISVVEFEKPG-----SVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEI 212 (238)
T ss_dssp CCEEECCCSTT-----CHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHH
T ss_pred CceEecCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 68999886532 23567788888888888889999953 2344555554444
No 26
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.44 E-value=16 Score=24.88 Aligned_cols=39 Identities=21% Similarity=0.109 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhcc
Q 046780 179 VCRDIIVDYAKKTTELALTLFELISEALGLNANRLKDMD 217 (290)
Q Consensus 179 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~ 217 (290)
.-+.+++.|+..-.+-...-+..||+.+||+.+.....+
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 347789999988888888888999999999988766543
No 27
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=28.45 E-value=62 Score=27.83 Aligned_cols=52 Identities=15% Similarity=-0.037 Sum_probs=37.7
Q ss_pred CCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCC-CCHHHHHHHHHHHHHhccC
Q 046780 65 FIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHG-IPVSILDEMIDGVIGFHEQ 124 (290)
Q Consensus 65 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHG-i~~~~~~~~~~~~~~FF~L 124 (290)
.+|+-||++... + .+..++|++++.++|+..+.|-. ++. +...+.++.|-.+
T Consensus 26 aei~gvdl~~~l-~----~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDL-D----AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTC-C----HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccC-C----HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 457778888743 2 23468899999999999999877 774 4556667776544
No 28
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=28.23 E-value=31 Score=24.69 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCChhhhhhc-ccCCCccccc
Q 046780 195 ALTLFELISEALGLNANRLKDM-DCAEGLFLLG 226 (290)
Q Consensus 195 ~~~ll~~la~~Lgl~~~~~~~~-~~~~~~~lr~ 226 (290)
+.+||+.+++-|+++..+|.+. ...+...+|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 6789999999999999999886 3344444555
No 29
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=28.01 E-value=61 Score=20.74 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 046780 189 KKTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 189 ~~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
++-++|+..|.+++.+.||++++..
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccE
Confidence 3456889999999999999997643
No 30
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=27.59 E-value=1.3e+02 Score=23.79 Aligned_cols=40 Identities=13% Similarity=0.271 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhcc-eeEEec-CCCCHHHHHHHHHHHHH
Q 046780 81 SRAKIVKQVQNACQNWG-FFQIVN-HGIPVSILDEMIDGVIG 120 (290)
Q Consensus 81 ~~~~~~~~l~~A~~~~G-FF~l~n-HGi~~~~~~~~~~~~~~ 120 (290)
.+...+++|.+.+++.. .++|++ +|++.+.+.++.+..++
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56678888888888888 666665 68888877777776653
No 31
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=27.46 E-value=67 Score=27.26 Aligned_cols=53 Identities=15% Similarity=0.024 Sum_probs=37.6
Q ss_pred CCCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccC
Q 046780 64 EFIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQ 124 (290)
Q Consensus 64 ~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~L 124 (290)
..+|+-||++... + .+..++|.+++.++|+..+.|-.++.+ ...+.++.|-.+
T Consensus 15 Gaei~gvdl~~~l-~----~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~~ 67 (283)
T 1otj_A 15 GAQISGADLTRPL-S----DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGEL 67 (283)
T ss_dssp CEEEESCCSSSCC-C----HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSCB
T ss_pred eEEEECCCcCccC-C----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 3467888998743 2 234788999999999999999877654 345566666443
No 32
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=27.08 E-value=24 Score=30.43 Aligned_cols=51 Identities=18% Similarity=0.043 Sum_probs=34.4
Q ss_pred CcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCC--HHHHHHHHHHHHHh
Q 046780 66 IIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIP--VSILDEMIDGVIGF 121 (290)
Q Consensus 66 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~--~~~~~~~~~~~~~F 121 (290)
.||++++.... ..++++.+.+++++.-.+.+.|||+= -+.+++++..+..+
T Consensus 179 ~v~v~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~l 231 (274)
T 2v9l_A 179 GVGILPWMVPG-----TDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTA 231 (274)
T ss_dssp CEEECCCCCSS-----SHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHHH
T ss_pred ceeEecCCCCC-----CHHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHHH
Confidence 58999886432 23667888889988888999999953 23445555544443
No 33
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=26.39 E-value=1.3e+02 Score=23.89 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 046780 80 ISRAKIVKQVQNACQNWGFFQIVN-HGIPVSILDEMIDGVIG 120 (290)
Q Consensus 80 ~~~~~~~~~l~~A~~~~GFF~l~n-HGi~~~~~~~~~~~~~~ 120 (290)
+.+...+++|.+.+++...++|++ +|++.+.+.++.+..++
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 456778899999999999888886 58998888887776664
No 34
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=25.76 E-value=71 Score=20.60 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 046780 189 KKTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 189 ~~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
++-++|+..|.+++++.||++++..
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCcCcccE
Confidence 3456888899999999999997643
No 35
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=24.92 E-value=30 Score=29.82 Aligned_cols=51 Identities=12% Similarity=0.172 Sum_probs=33.6
Q ss_pred CcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCC--HHHHHHHHHHHHH
Q 046780 66 IIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIP--VSILDEMIDGVIG 120 (290)
Q Consensus 66 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~--~~~~~~~~~~~~~ 120 (290)
.||++|+..+..+ .++.+.|.+++.+.-.+.+.|||+= -..+++++..+..
T Consensus 156 ~v~~~~y~~~~~~----~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~~ 208 (273)
T 3ocr_A 156 RVAYHGYEGIALD----LSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLHA 208 (273)
T ss_dssp TEEEECCCCSSCC----HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCCCCCC----HHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHHH
Confidence 5899988764212 3456777888888889999999953 2334444444443
No 36
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.47 E-value=65 Score=20.50 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 046780 190 KTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 190 ~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
+-++|+..|.+++++.||++++..
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHHhCcCcceE
Confidence 446889999999999999997643
No 37
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=24.41 E-value=74 Score=21.18 Aligned_cols=24 Identities=17% Similarity=0.288 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 046780 190 KTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 190 ~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
+-++|+..|.+++.+.||++++..
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 446889999999999999998754
No 38
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=24.40 E-value=73 Score=20.91 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 046780 189 KKTTELALTLFELISEALGLNANRL 213 (290)
Q Consensus 189 ~~~~~l~~~ll~~la~~Lgl~~~~~ 213 (290)
+.-++|...|.+++++.||++++.+
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccE
Confidence 3446888999999999999997654
No 39
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=23.97 E-value=78 Score=27.03 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=38.2
Q ss_pred CCCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHhccC
Q 046780 64 EFIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNHGIPVSILDEMIDGVIGFHEQ 124 (290)
Q Consensus 64 ~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~~~~~~~~~~~~FF~L 124 (290)
.++|.=|||+... + .+..++|++|+.++|...+.|-.++.+ +..+.++.|=.+
T Consensus 13 Gaei~gvdl~~~l-~----~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 13 GAQISGVDISRDI-S----AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp CEEEESCCTTSCC-C----HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred eEEEeCCCccccC-C----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 3467778998732 2 245688999999999999999888754 445567776543
No 40
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=23.74 E-value=85 Score=25.18 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCChh--hhhhc-ccCCC---ccccccccCCCCCCCCCCCCcccccCCCeeEEecCCCCCeE
Q 046780 189 KKTTELALTLFELISEALGLNAN--RLKDM-DCAEG---LFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQ 262 (290)
Q Consensus 189 ~~~~~l~~~ll~~la~~Lgl~~~--~~~~~-~~~~~---~~lr~~yYPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQ 262 (290)
++|+.+.+++|.-++..=||+.+ ++-.+ ....+ .-..-..||- =+||++|.+--.|+
T Consensus 14 ~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~~~L~~~YP~-----------------EMTIVLQhQF~dL~ 76 (176)
T 2nys_A 14 DALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAE-----------------QMTIVIQHQFWDMK 76 (176)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCBCCHHHHHHSSS-----------------EEEEEESSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHHHhhCCC-----------------ceEEEEEeeecCcE
Confidence 46788889999888886558754 22222 11111 1112244664 39999999888999
Q ss_pred EeeCC
Q 046780 263 VLHEN 267 (290)
Q Consensus 263 V~~~g 267 (290)
|..+|
T Consensus 77 V~e~~ 81 (176)
T 2nys_A 77 VTETG 81 (176)
T ss_dssp ECSSE
T ss_pred EecCc
Confidence 97664
No 41
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=22.97 E-value=99 Score=26.81 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=38.3
Q ss_pred CCCcceeeCCCCCCChHHHHHHHHHHHHHHHhcceeEEecC-CCCHHHHHHHHHHHHHhccC
Q 046780 64 EFIIPILDLDGVNKDAISRAKIVKQVQNACQNWGFFQIVNH-GIPVSILDEMIDGVIGFHEQ 124 (290)
Q Consensus 64 ~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nH-Gi~~~~~~~~~~~~~~FF~L 124 (290)
.++|+=|||+... + .+..++|++|+.++|...+.|- .++.+ ...+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L-~----d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDL-D----DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTC-C----HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccC-C----HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 3467888998422 2 2456889999999999999997 77764 445667776554
No 42
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=22.46 E-value=49 Score=24.02 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCChhhhhhc-ccCCCcccccc
Q 046780 195 ALTLFELISEALGLNANRLKDM-DCAEGLFLLGH 227 (290)
Q Consensus 195 ~~~ll~~la~~Lgl~~~~~~~~-~~~~~~~lr~~ 227 (290)
+.+|++.+|+-|+++..+|.+. ...+...+|+.
T Consensus 26 G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~ 59 (99)
T 4hti_A 26 GRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVS 59 (99)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHhCCchhheeeeeecCceEEEEec
Confidence 6788999999999999999875 33444445554
No 43
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=21.55 E-value=1.3e+02 Score=26.52 Aligned_cols=41 Identities=10% Similarity=0.222 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 046780 80 ISRAKIVKQVQNACQNWGFFQIVN-HGIPVSILDEMIDGVIG 120 (290)
Q Consensus 80 ~~~~~~~~~l~~A~~~~GFF~l~n-HGi~~~~~~~~~~~~~~ 120 (290)
+.+...+++|.+.+.++..++|++ +|++...++++.+..|+
T Consensus 6 e~K~~~v~el~e~l~~~~~v~vv~~~gl~v~ql~~LR~~lR~ 47 (312)
T 3u5i_q 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRG 47 (312)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 456788999999999998888886 78999888888877764
Done!