Query 046783
Match_columns 830
No_of_seqs 304 out of 1727
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 04:27:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046783.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046783hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1484 Putative Zn2+ transpor 100.0 8.5E-61 1.8E-65 507.1 31.1 333 396-829 15-347 (354)
2 COG1230 CzcD Co/Zn/Cd efflux s 100.0 2.9E-54 6.4E-59 460.6 34.6 278 410-829 16-294 (296)
3 KOG1483 Zn2+ transporter ZNT1 100.0 3E-53 6.4E-58 457.0 18.1 359 414-829 7-370 (404)
4 PRK03557 zinc transporter ZitB 100.0 1E-46 2.2E-51 411.4 37.4 276 412-829 15-292 (312)
5 KOG1482 Zn2+ transporter [Inor 100.0 6.9E-46 1.5E-50 399.0 24.0 294 414-830 71-367 (379)
6 PRK09509 fieF ferrous iron eff 100.0 2E-42 4.4E-47 375.4 35.2 276 413-830 8-288 (299)
7 COG0053 MMT1 Predicted Co/Zn/C 100.0 3.5E-41 7.5E-46 366.0 34.6 276 413-830 10-291 (304)
8 TIGR01297 CDF cation diffusion 100.0 3.4E-40 7.4E-45 351.0 30.9 261 428-829 2-268 (268)
9 PF01545 Cation_efflux: Cation 100.0 1.3E-39 2.9E-44 348.7 12.8 275 418-830 1-282 (284)
10 KOG1485 Mitochondrial Fe2+ tra 100.0 1.8E-29 3.8E-34 276.9 28.5 273 410-828 109-399 (412)
11 COG3965 Predicted Co/Zn/Cd cat 99.9 6.7E-20 1.5E-24 189.2 22.3 275 412-826 16-306 (314)
12 COG0053 MMT1 Predicted Co/Zn/C 99.6 2.6E-15 5.7E-20 163.9 17.0 198 270-512 12-209 (304)
13 KOG2802 Membrane protein HUEL 99.6 2E-14 4.3E-19 154.7 12.8 123 413-535 204-328 (503)
14 PRK09509 fieF ferrous iron eff 99.5 6.5E-13 1.4E-17 144.8 17.8 199 270-513 10-208 (299)
15 PRK03557 zinc transporter ZitB 99.3 1.2E-11 2.6E-16 135.9 15.2 196 272-513 20-215 (312)
16 TIGR01297 CDF cation diffusion 99.3 1.3E-11 2.7E-16 131.9 11.7 186 284-514 3-188 (268)
17 KOG1485 Mitochondrial Fe2+ tra 98.7 1.1E-07 2.4E-12 106.1 11.8 209 268-513 112-320 (412)
18 PF01545 Cation_efflux: Cation 98.6 4.2E-08 9.1E-13 105.5 5.4 197 274-514 2-201 (284)
19 COG1230 CzcD Co/Zn/Cd efflux s 98.5 2.2E-06 4.7E-11 93.3 15.1 205 268-520 20-226 (296)
20 KOG1484 Putative Zn2+ transpor 96.3 0.037 8E-07 61.1 11.6 196 272-512 36-268 (354)
21 KOG1482 Zn2+ transporter [Inor 93.7 0.56 1.2E-05 52.7 11.4 180 294-516 96-292 (379)
22 PF02535 Zip: ZIP Zinc transpo 88.4 16 0.00034 39.9 16.0 33 480-512 35-67 (317)
23 PRK10019 nickel/cobalt efflux 84.7 51 0.0011 36.4 17.2 28 482-509 85-112 (279)
24 PF03824 NicO: High-affinity n 79.3 81 0.0018 34.4 16.5 25 730-754 224-248 (282)
25 COG3965 Predicted Co/Zn/Cd cat 78.3 34 0.00073 37.3 12.5 163 267-469 17-182 (314)
26 PRK10532 threonine and homoser 77.1 24 0.00052 38.4 11.7 123 61-209 14-136 (293)
27 COG2215 ABC-type uncharacteriz 74.8 1.5E+02 0.0032 33.2 18.1 32 721-752 236-267 (303)
28 PLN00411 nodulin MtN21 family 72.3 1E+02 0.0022 35.2 15.4 136 58-210 12-156 (358)
29 KOG1483 Zn2+ transporter ZNT1 67.1 3.3 7.1E-05 47.1 2.0 103 267-387 5-107 (404)
30 PF14535 AMP-binding_C_2: AMP- 65.2 43 0.00092 30.5 8.6 64 762-827 8-77 (96)
31 PF00892 EamA: EamA-like trans 64.1 5.5 0.00012 36.3 2.6 69 134-209 53-125 (126)
32 PF03780 Asp23: Asp23 family; 63.9 45 0.00098 30.7 8.7 52 779-830 50-108 (108)
33 COG5006 rhtA Threonine/homoser 62.9 29 0.00062 37.8 7.9 182 64-290 14-198 (292)
34 COG1575 MenA 1,4-dihydroxy-2-n 58.0 1.1E+02 0.0023 34.3 11.5 52 449-500 115-167 (303)
35 PTZ00343 triose or hexose phos 52.9 3.3E+02 0.0071 30.7 14.8 128 134-289 114-250 (350)
36 PRK11118 putative monooxygenas 52.3 46 0.001 31.1 6.4 68 756-828 19-87 (100)
37 PF09580 Spore_YhcN_YlaJ: Spor 50.5 75 0.0016 32.0 8.4 64 758-826 75-140 (177)
38 PRK10019 nickel/cobalt efflux 49.1 4.1E+02 0.0089 29.5 15.2 13 729-741 220-232 (279)
39 PF13740 ACT_6: ACT domain; PD 48.1 1.2E+02 0.0026 26.3 8.2 61 760-825 16-76 (76)
40 PF03806 ABG_transport: AbgT p 44.3 6.4E+02 0.014 30.3 17.6 46 421-466 300-345 (502)
41 cd04869 ACT_GcvR_2 ACT domains 43.1 1.7E+02 0.0037 25.1 8.4 55 769-825 21-80 (81)
42 PLN02601 beta-carotene hydroxy 42.9 3.1E+02 0.0068 30.3 11.7 75 464-545 83-160 (303)
43 cd04870 ACT_PSP_1 CT domains f 41.4 1.7E+02 0.0036 25.2 8.1 54 769-825 21-74 (75)
44 PRK10614 multidrug efflux syst 40.8 69 0.0015 41.6 7.8 91 718-814 6-112 (1025)
45 PRK15430 putative chlorampheni 40.2 5.2E+02 0.011 28.1 13.7 65 138-209 77-144 (296)
46 PF08449 UAA: UAA transporter 39.7 3.8E+02 0.0082 29.4 12.4 139 134-289 64-205 (303)
47 PF07260 ANKH: Progressive ank 39.4 33 0.00072 38.6 4.0 97 144-257 49-152 (345)
48 TIGR00817 tpt Tpt phosphate/ph 37.8 66 0.0014 35.1 6.1 129 133-289 64-196 (302)
49 PF01566 Nramp: Natural resist 36.7 6.6E+02 0.014 28.2 14.7 60 478-537 111-177 (358)
50 KOG2802 Membrane protein HUEL 34.6 29 0.00064 39.4 2.7 83 266-352 203-285 (503)
51 PF05684 DUF819: Protein of un 31.2 8.7E+02 0.019 28.0 17.9 51 483-541 265-315 (378)
52 TIGR02945 SUF_assoc FeS assemb 30.9 3.3E+02 0.0072 24.7 8.7 42 787-828 37-79 (99)
53 PF08803 ydhR: Putative mono-o 30.2 1.4E+02 0.003 28.0 5.9 67 758-829 18-85 (97)
54 PF01037 AsnC_trans_reg: AsnC 29.8 2E+02 0.0043 24.0 6.5 59 758-826 10-70 (74)
55 TIGR02159 PA_CoA_Oxy4 phenylac 28.5 1.9E+02 0.0041 28.9 7.0 43 786-828 24-66 (146)
56 COG4858 Uncharacterized membra 27.1 7.6E+02 0.016 26.0 12.6 47 495-541 102-150 (226)
57 PRK15385 magnesium transport p 26.9 7.3E+02 0.016 26.7 11.4 56 769-827 166-223 (225)
58 PRK11589 gcvR glycine cleavage 26.7 2.8E+02 0.006 28.9 8.1 57 769-827 117-178 (190)
59 TIGR00489 aEF-1_beta translati 26.4 3.7E+02 0.0081 24.7 7.9 73 750-825 9-83 (88)
60 PF01390 SEA: SEA domain; Int 26.3 3.3E+02 0.0072 24.5 7.9 43 774-816 51-95 (107)
61 PF02790 COX2_TM: Cytochrome C 26.0 2.8E+02 0.006 24.1 7.0 31 471-501 50-80 (84)
62 COG0387 ChaA Ca2+/H+ antiporte 25.7 1.1E+03 0.023 27.3 13.8 101 434-541 86-188 (368)
63 COG2978 AbgT Putative p-aminob 25.7 1E+03 0.022 28.5 12.9 44 422-465 313-356 (516)
64 PF01883 DUF59: Domain of unkn 24.3 2.3E+02 0.005 24.0 6.0 39 784-824 31-72 (72)
65 PF00403 HMA: Heavy-metal-asso 23.6 3.1E+02 0.0067 22.3 6.5 46 759-812 12-58 (62)
66 COG1953 FUI1 Cytosine/uracil/t 23.4 90 0.0019 37.1 4.2 80 265-355 358-451 (497)
67 PF02038 ATP1G1_PLM_MAT8: ATP1 23.1 1.3E+02 0.0029 24.8 3.9 31 473-504 4-34 (50)
68 COG2092 EFB1 Translation elong 22.8 3.5E+02 0.0077 24.9 6.9 70 751-824 10-82 (88)
69 PRK09577 multidrug efflux prot 21.5 2.4E+02 0.0053 36.7 8.0 58 752-815 53-111 (1032)
70 PF09877 DUF2104: Predicted me 21.4 1E+02 0.0023 28.8 3.3 32 460-498 66-97 (99)
71 cd00292 EF1B Elongation factor 20.3 6.6E+02 0.014 23.0 8.3 72 750-825 9-83 (88)
No 1
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-61 Score=507.09 Aligned_cols=333 Identities=53% Similarity=0.803 Sum_probs=288.9
Q ss_pred chhhhhccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 046783 396 ESFSSLIMKPIRHILSERKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQ 475 (830)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~ 475 (830)
.+..+.+++..+++..++++|+++.++++|+.++.+|+++|.++||++|++|++||++||.++.++|++..+++||+|.+
T Consensus 15 ~s~~~~~~~~~r~il~~~~sr~if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~ 94 (354)
T KOG1484|consen 15 DSIPRKINSWFRQILSDKDSRSIFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDK 94 (354)
T ss_pred hhhHHHHHHHHHhhccCcchhhhHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccc
Confidence 44455566677888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHhhccccccCCccccCC
Q 046783 476 FNYGRGRFEVLSGYTNAVFLVLVGALIVLESFERILDPQEISTNSLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSH 555 (830)
Q Consensus 476 ~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~p~~i~~~~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h 555 (830)
|+|||+|+|++++|++++++.+++++|+.|+++|+++|+|+.++.+++|+++|+++|++|++.|+..|+|+||+.+.++|
T Consensus 95 fsyG~~r~evLagF~n~vflvl~a~fi~~Es~eRl~~ppei~t~rllvVS~~gllvnLvGi~aF~h~~~h~hg~~~~s~~ 174 (354)
T KOG1484|consen 95 FSYGYGRIEVLAGFVNGVFLVLIAFFIFSESVERLFDPPEIHTNRLLVVSVLGLLVNLVGILAFSHGHAHSHGSHHHSSH 174 (354)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcCchhcCCceeEEeeHHHHHHHHHHHHHhccccccccCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998766666663111111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCC
Q 046783 556 SHSHSHPHHHHQHSHDHEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQ 635 (830)
Q Consensus 556 ~h~~sh~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 635 (830)
+ +|... .+|..
T Consensus 175 ~---~h~~~-----~~~~~------------------------------------------------------------- 185 (354)
T KOG1484|consen 175 S---GHLAL-----LFHSL------------------------------------------------------------- 185 (354)
T ss_pred c---cchhc-----ccccc-------------------------------------------------------------
Confidence 0 00000 00000
Q ss_pred CCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046783 636 HSHRDHTHKHNNHYHHHPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKY 715 (830)
Q Consensus 636 ~~~~~~~h~~~~~~~~h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~ 715 (830)
.+..+.|+|.+ . +.+.+.+.+|.++|+|+++|++||+||+|+++++++
T Consensus 186 --------~~~~~~~~~~~---~---------------------~i~g~~~~~m~gifLHVLaDtlgSvGviist~Li~~ 233 (354)
T KOG1484|consen 186 --------LGVWDLHHHAH---G---------------------HIHGHSHENMPGIFLHVLADTLGSVGVIISTLLIKL 233 (354)
T ss_pred --------ccccccccccc---c---------------------ccCCcccccccchhHHHHHHHhcchHHHHHHHHHHh
Confidence 00000000000 0 001123457889999999999999999999999999
Q ss_pred hCCccchhhhHHHHHHHHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEE
Q 046783 716 KGWLVADPACSIFISLLIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNL 795 (830)
Q Consensus 716 ~gw~~~DPi~SiiIsilIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV 795 (830)
+||.++||+|+++|+++|+.+++||+|+++++|||++||+++.++++++++|.+++||.++.+.|+|+++.+.++|++|+
T Consensus 234 ~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq~tPp~~~~~l~~cl~~Is~~~gV~~v~~~hFWt~~~g~~vGtlhl 313 (354)
T KOG1484|consen 234 FGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQRTPPHLENSLKQCLRQISTLDGVTSVQNPHFWTLESGSVVGTLHL 313 (354)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhHHHHHHHHhhccccceeeccCceeeccCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCHHHHHHHHHHHHhcCCCCeEEEEEEec
Q 046783 796 HVSSEADMVSIKAQVSHMLSDAGIKDLTLQVECV 829 (830)
Q Consensus 796 ~V~~~~~~~~I~~~V~~il~~~gI~~vTIQiE~~ 829 (830)
+|..|+|++.+.+++.+++++.||+++|||+|+.
T Consensus 314 ~V~~dade~~vl~~V~~~~~~~gV~~ltvQv~~~ 347 (354)
T KOG1484|consen 314 QVSSDADEQSVLAHVTRKLEDAGVKDLTVQVEKE 347 (354)
T ss_pred EEecCcchhHHHHHHHHHHHhcceeEEEEEEecc
Confidence 9999999999999999999999999999999975
No 2
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-54 Score=460.56 Aligned_cols=278 Identities=37% Similarity=0.673 Sum_probs=261.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q 046783 410 LSERKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGY 489 (830)
Q Consensus 410 ~~~~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laal 489 (830)
..++.+|++++++++|++|+++|+++|+++||++|+||++||++|+++.+++++|.++++||++++|||||+|+|.++++
T Consensus 16 ~~~~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~ 95 (296)
T COG1230 16 DNPRNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAF 95 (296)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHH
Confidence 35567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCC
Q 046783 490 TNAVFLVLVGALIVLESFERILDPQEISTNSLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHS 569 (830)
Q Consensus 490 v~ai~Ll~i~~~Il~EsI~rLi~p~~i~~~~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~ 569 (830)
+|+++++.++++|++|+++|+.+|++++...|++++++|+++|+++++.++++
T Consensus 96 ~nav~Li~~s~~I~~EAi~R~~~P~~i~~~~ml~va~~GL~vN~~~a~ll~~~--------------------------- 148 (296)
T COG1230 96 LNALLLIVVSLLILWEAIQRLLAPPPIHYSGMLVVAIIGLVVNLVSALLLHKG--------------------------- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHhhCC---------------------------
Confidence 99999999999999999999999999999999999999999999999999640
Q ss_pred CCCCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCC
Q 046783 570 HDHEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHY 649 (830)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~ 649 (830)
T Consensus 149 -------------------------------------------------------------------------------- 148 (296)
T COG1230 149 -------------------------------------------------------------------------------- 148 (296)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHHHH
Q 046783 650 HHHPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLVADPACSIFI 729 (830)
Q Consensus 650 ~~h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~~~DPi~SiiI 729 (830)
+++|.|||+.|+|+++|++||++|++++++++++||.|+||++|++|
T Consensus 149 ---------------------------------~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~Dpi~si~i 195 (296)
T COG1230 149 ---------------------------------HEENLNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWLDPILSIVI 195 (296)
T ss_pred ---------------------------------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchHHHHHH
Confidence 00356999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHH
Q 046783 730 SLLIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQ 809 (830)
Q Consensus 730 silIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~ 809 (830)
+++|+.+++|++|++..+||+.+|+ ..|++++++.+.++|||.+|||+|+|+++++..++++|+++++..+.+++.++
T Consensus 196 ~~lil~~a~~l~k~s~~iLle~~P~--~id~~~~~~~l~~~~~v~~vhdlHvWsi~~~~~~~t~Hv~v~~~~~~~~~~~~ 273 (296)
T COG1230 196 ALLILSSAWPLLKESLNILLEGVPE--GIDIDKVREALLRIPGVASVHDLHVWSITGGEHALTLHVVVDEVADADAALDQ 273 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC--ccCHHHHHHHHhcCCCccceeecccCCCCCCceeEEEEEEecCccchHHHHHH
Confidence 9999999999999999999999998 47899999999999999999999999999999999999999976777778888
Q ss_pred HHHHH-hcCCCCeEEEEEEec
Q 046783 810 VSHML-SDAGIKDLTLQVECV 829 (830)
Q Consensus 810 V~~il-~~~gI~~vTIQiE~~ 829 (830)
+++.+ +++||+++|||+|+.
T Consensus 274 ~~~~l~~~~~I~hvTiQ~e~~ 294 (296)
T COG1230 274 IVRRLLEKYGIEHVTIQLETE 294 (296)
T ss_pred HHHHHhhhcCcceEEEEecCC
Confidence 77776 568999999999974
No 3
>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-53 Score=457.00 Aligned_cols=359 Identities=30% Similarity=0.519 Sum_probs=273.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHH
Q 046783 414 KSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAV 493 (830)
Q Consensus 414 ~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai 493 (830)
++.++...+++.++|+++|++.|+.++|++|+||++||+.|+++.++++++++.|++.++++|||||.|+|.+++++|++
T Consensus 7 k~~rli~~l~ltiiFfvLEli~gyv~~sLaLiadSfHML~dIiaLivaf~~ik~a~~~~~~k~tyGw~rAEilGalvN~i 86 (404)
T KOG1483|consen 7 KSLRLISVLVLTIIFFVLELITGYVTNSLALIADSFHMLNDIIALIVAFWAIKEAKRIPLQKYTYGWARAEILGALVNAI 86 (404)
T ss_pred cccceeehHHHHHHHHHhhhhhhcccchHHHHhhHHHHHHHHHHHHHHHHHHHhhhcCcccccCcchhHHHHHhhhhHHH
Confidence 45567778999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccchhHH-HHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCCC
Q 046783 494 FLVLVGALIVLESFERILDPQEISTNSL-LTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHDH 572 (830)
Q Consensus 494 ~Ll~i~~~Il~EsI~rLi~p~~i~~~~l-l~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~~ 572 (830)
|+...++.|+.|+++|+++|++++.+.. +.++++|+++|+++++.|++ |+|+|++ |.|.|+|+..++.-...+.|.+
T Consensus 87 fl~alc~~I~~EA~~R~I~p~~i~~P~~vL~vgi~gLi~Nvlg~~lfhd-hg~~h~~-~~H~h~hg~~~~~~~~~~~~~~ 164 (404)
T KOG1483|consen 87 FLTALCVSILIEAIERIIEPHHIENPILVLYVGIIGLISNVLGLFLFHD-HGHDHGH-GVHGHSHGGMKGFIGLNLTHLH 164 (404)
T ss_pred HHHHHHHHHHHHHHHhhcCCccccCceeeehhhHHHHHHHHHHhheeec-cCcccCC-cCCCCCCCccccchhhhccCCc
Confidence 9999999999999999999999998875 88999999999999999986 4455542 2333333332221000011111
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc-ccccccCCCCCCCCCCCCCCCcccccCCCCCCC
Q 046783 573 EGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDST-LKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHH 651 (830)
Q Consensus 573 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~-~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 651 (830)
... .|+ ....+...|.++ .+..+..+-.+++ ..++. .+...
T Consensus 165 ~~~--------------------------~G~--~t~~~~~d~~~~~~p~~~l~~~~~~N---------~~~~s-~pv~~ 206 (404)
T KOG1483|consen 165 SHA--------------------------IGC--NTLAKQLDTPLGPGPNAHLSGVMSQN---------LDGSS-TPVQN 206 (404)
T ss_pred hhc--------------------------cCC--cchhhccccCCCCcchhhhccccccC---------CCCCC-Ccccc
Confidence 000 000 000000000000 0000000000000 00000 00000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---cchhhhHHH
Q 046783 652 HPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWL---VADPACSIF 728 (830)
Q Consensus 652 h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~---~~DPi~Sii 728 (830)
|+.-++++ +.+.+++ ++.++.||+|+|+|++.|++++++|+++++++|+++|. |+||+.||+
T Consensus 207 ---------~~S~~r~~----~~~~~~e--~~~~~lnmhGv~LhvL~Dalg~I~Vi~~A~~v~~t~~~~~~y~DP~lsi~ 271 (404)
T KOG1483|consen 207 ---------HGSLSRDD----AREKTEE--KLDRNLNMHGVFLHVLGDALGSIIVIVSALFVYKTEYSWAYYLDPILSIV 271 (404)
T ss_pred ---------CCcccccc----hhhhhhh--hhhccccccceeeeeecccccceEEEEEEEEEEecceehhhhcCchHHHH
Confidence 00000000 1111111 44579999999999999999999999999999988774 689999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHH
Q 046783 729 ISLLIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKA 808 (830)
Q Consensus 729 IsilIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~ 808 (830)
++++|+.+++|++|+++.+|||.+|. ..|++++.+++.++|||.+|||+|+|++++.++++++||+++...++-++++
T Consensus 272 ~~~ii~~sa~pl~k~s~liLLq~~P~--~i~ld~v~~~l~~~~gv~~vh~lhvWqL~~~r~IAt~Hi~~~~p~~~~~~a~ 349 (404)
T KOG1483|consen 272 LTVIILFSAYPLLKESALILLQTTPG--SIDLDIVEKDLLTVPGVISVHDLHVWQLAGSRIIATIHIQIQNPKEYMKIAE 349 (404)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhCCC--cccHHHHHHHHhcCcceeeeeeeeeeeeccceEEEEEEEEecCcHHHHHHHH
Confidence 99999999999999999999999999 4789999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHhcCCCCeEEEEEEec
Q 046783 809 QVSHMLSDAGIKDLTLQVECV 829 (830)
Q Consensus 809 ~V~~il~~~gI~~vTIQiE~~ 829 (830)
+||++|+++||+.+|||+|++
T Consensus 350 ~ir~~fh~~GIhs~TiqPeF~ 370 (404)
T KOG1483|consen 350 KIRSYFHDQGIHSTTIQPEFA 370 (404)
T ss_pred HHHHHHHhcCCcceeeccchh
Confidence 999999999999999999985
No 4
>PRK03557 zinc transporter ZitB; Provisional
Probab=100.00 E-value=1e-46 Score=411.38 Aligned_cols=276 Identities=32% Similarity=0.566 Sum_probs=252.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHH
Q 046783 412 ERKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTN 491 (830)
Q Consensus 412 ~~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ 491 (830)
++.+|++++++++|++++++|+++|+++||++|+|||+||++|+++++++++++++++||+|++|||||+|+|+++++++
T Consensus 15 ~~~~r~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~~ 94 (312)
T PRK03557 15 DNNARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVN 94 (312)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCC
Q 046783 492 AVFLVLVGALIVLESFERILDPQEISTNSLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHD 571 (830)
Q Consensus 492 ai~Ll~i~~~Il~EsI~rLi~p~~i~~~~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~ 571 (830)
+++++++++++++|+++++++|++++...+++++++++++|+++++++++.
T Consensus 95 ~~~l~~~~~~i~~eai~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------------------------- 145 (312)
T PRK03557 95 AIALVVITILIVWEAIERFRTPRPVAGGMMMAIAVAGLLANILSFWLLHHG----------------------------- 145 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHHHhcc-----------------------------
Confidence 999999999999999999999988776667788899999999887766430
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCCCC
Q 046783 572 HEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHH 651 (830)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 651 (830)
T Consensus 146 -------------------------------------------------------------------------------- 145 (312)
T PRK03557 146 -------------------------------------------------------------------------------- 145 (312)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHHHHHH
Q 046783 652 HPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLVADPACSIFISL 731 (830)
Q Consensus 652 h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~~~DPi~SiiIsi 731 (830)
++.++.+++++++|++.|+++|++|+++.+++.++||+|+||+++++|++
T Consensus 146 ------------------------------~~~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~~~g~~~~Dpi~~ilis~ 195 (312)
T PRK03557 146 ------------------------------SEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWTGWTPADPILSILVSV 195 (312)
T ss_pred ------------------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHH
Confidence 01134589999999999999999999999999989999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHH-HcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHH
Q 046783 732 LIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDV-MKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQV 810 (830)
Q Consensus 732 lIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i-~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V 810 (830)
+|++++++++|++.+.|||++|+ +.+++++++.+ +++|||.++|++|+|+.|+ ++.+++||+++++.+.++|++++
T Consensus 196 ~i~~~~~~l~~~~~~~Lld~~p~--~~~~~~i~~~i~~~~~gV~~vh~l~~~~~G~-~~~v~~hv~v~~~~~~~~i~~~i 272 (312)
T PRK03557 196 LVLRSAWRLLKESVNELLEGAPV--SLDIAELKRRLCREIPEVRNVHHVHVWMVGE-KPVMTLHVQVIPPHDHDALLDRI 272 (312)
T ss_pred HHHHHHHHHHHHHHHHHHccCCC--CCCHHHHHHHHHhcCCCceeEEEEEEEEeCC-eEEEEEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999998 46688888887 5799999999999999985 56679999999988999999999
Q ss_pred HHHHhc-CCCCeEEEEEEec
Q 046783 811 SHMLSD-AGIKDLTLQVECV 829 (830)
Q Consensus 811 ~~il~~-~gI~~vTIQiE~~ 829 (830)
++.+++ +|+.++|||+||.
T Consensus 273 ~~~l~~~~~i~~vtIh~e~~ 292 (312)
T PRK03557 273 QDYLMHHYQIEHATIQMEYQ 292 (312)
T ss_pred HHHHHHhCCCCEEEEEeccC
Confidence 999974 5999999999975
No 5
>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-46 Score=398.98 Aligned_cols=294 Identities=32% Similarity=0.601 Sum_probs=262.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHH
Q 046783 414 KSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAV 493 (830)
Q Consensus 414 ~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai 493 (830)
..|+++.+.++.+.|++.|++.|+..||+|+++||.|++.|+.+.++++++++.++||+|++.+|||.|+|.+++++...
T Consensus 71 ~~r~L~~~~~l~l~fm~~E~vGg~~a~SLAImTDAaHlLsD~~sf~isl~slw~s~~pa~~r~sfG~~R~Evlgal~Sv~ 150 (379)
T KOG1482|consen 71 AERKLSIAAALCLVFMIGEVVGGYKANSLAIMTDAAHLLSDVASFIISLFSLWLSSRPATKRMSFGFHRAEVLGALVSVL 150 (379)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCeeccchhhhhcchHHHHHHHHHHHHHHHHHHccCCCCCceecceehHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCC-ccchhHHHHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCCC
Q 046783 494 FLVLVGALIVLESFERILDPQ-EISTNSLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHDH 572 (830)
Q Consensus 494 ~Ll~i~~~Il~EsI~rLi~p~-~i~~~~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~~ 572 (830)
.++++.+.+++++++|+++++ |++...|++++.+|+++|+++.++++... |+|+|+++|.|+|
T Consensus 151 ~IW~~tgvLV~~Ai~Rl~s~~~ev~g~~m~i~a~~gv~vNiim~~vL~~~~---------h~h~H~~~~s~g~------- 214 (379)
T KOG1482|consen 151 LIWVVTGVLVYEAIQRLLSGDYEVNGGIMLITAAVGVAVNIIMGFVLHQSG---------HGHSHGGSHSHGH------- 214 (379)
T ss_pred HHHHhhhhhHHHHHhhhhcCceeecceEEEEEeehhhhhhhhhhhhhcccC---------CCCCCCCCCCcCc-------
Confidence 999999999999999999998 78888889999999999999999986420 1111111111100
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCCCCC
Q 046783 573 EGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHHH 652 (830)
Q Consensus 573 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~h 652 (830)
.
T Consensus 215 -------------------------------------------------~------------------------------ 215 (379)
T KOG1482|consen 215 -------------------------------------------------S------------------------------ 215 (379)
T ss_pred -------------------------------------------------c------------------------------
Confidence 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCccchhhhHHHHHH
Q 046783 653 PANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYK-GWLVADPACSIFISL 731 (830)
Q Consensus 653 ~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~-gw~~~DPi~SiiIsi 731 (830)
|++. + + .|.|+|+.|+|+++|.+.|+||+++++++++. +|.++||+|+++.++
T Consensus 216 --------h~~~----------~-------~-~n~nvraAyiHVlGDliQSvGV~iaa~Ii~f~P~~~i~DpICT~~FSi 269 (379)
T KOG1482|consen 216 --------HDHG----------E-------E-LNLNVRAAFVHVLGDLIQSVGVLIAALIIYFKPEYKIADPICTFVFSI 269 (379)
T ss_pred --------cccc----------c-------c-cchHHHHHHHHHHHHHHHHHHHHhhheeEEecccceecCchhhhhHHH
Confidence 0000 0 0 27899999999999999999999999999987 899999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHH
Q 046783 732 LIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVS 811 (830)
Q Consensus 732 lIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~ 811 (830)
+.+.+.++++|+...+||+.+|. +.+.+.+.+.+..+|||+.|||+|+|.++-++.+.++||.+++++|.++|.++++
T Consensus 270 ivl~TT~~i~rd~~~iLmE~~P~--~~d~~~~~~~l~~iegV~~VHdLhIWsiTv~k~~ls~Hv~i~~~ad~~~vL~~~~ 347 (379)
T KOG1482|consen 270 IVLGTTITILRDILGILMEGTPR--NLDFDKVKKGLLSIEGVKAVHDLHIWSITVGKVALSVHLAIDSEADAEEVLDEAR 347 (379)
T ss_pred HHHHhHHHHHHHHHHHHhcCCCc--cCcHHHHHHHHhhhcceeEEEEEEEEEEecCceEEEEEEeecCCCCHHHHHHHHH
Confidence 99999999999999999999999 5788999999999999999999999999999999999999999999999999999
Q ss_pred HHHh-cCCCCeEEEEEEecC
Q 046783 812 HMLS-DAGIKDLTLQVECVR 830 (830)
Q Consensus 812 ~il~-~~gI~~vTIQiE~~~ 830 (830)
+.++ ++|+.++|||+|+..
T Consensus 348 ~~i~~~~~~~~vTiQie~~~ 367 (379)
T KOG1482|consen 348 SLIKRRYGISHVTIQIEPYT 367 (379)
T ss_pred HHHHhhcceEEEEEEecCCc
Confidence 9997 679999999999863
No 6
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=100.00 E-value=2e-42 Score=375.40 Aligned_cols=276 Identities=20% Similarity=0.271 Sum_probs=245.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHH
Q 046783 413 RKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNA 492 (830)
Q Consensus 413 ~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~a 492 (830)
..+|..++++++|++++++|+++|+++||++|+|||+||+.|++++++++++.++++||+|++|||||+|+|++++++++
T Consensus 8 ~~~~~~~~~~~~n~~l~i~k~~~g~~sgS~allaDa~hsl~D~~~~~l~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~ 87 (299)
T PRK09509 8 LVSRAAIAATAMASLLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQS 87 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHH
Confidence 34467788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccchhHH-HHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCC
Q 046783 493 VFLVLVGALIVLESFERILDPQEISTNSL-LTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHD 571 (830)
Q Consensus 493 i~Ll~i~~~Il~EsI~rLi~p~~i~~~~l-l~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~ 571 (830)
++++++++++++|+++++++|++++...+ ++++++++++|.+..++.++.
T Consensus 88 ~~l~~~~~~~~~esi~~l~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~----------------------------- 138 (299)
T PRK09509 88 MFISGSALFLFLTGIQHLISPTPMNDPGVGIIVTLVALICTLILVTFQRWV----------------------------- 138 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 99999999999999999999988776554 778899999999866555431
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCCCC
Q 046783 572 HEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHH 651 (830)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 651 (830)
T Consensus 139 -------------------------------------------------------------------------------- 138 (299)
T PRK09509 139 -------------------------------------------------------------------------------- 138 (299)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHHHHHH
Q 046783 652 HPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLVADPACSIFISL 731 (830)
Q Consensus 652 h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~~~DPi~SiiIsi 731 (830)
.++..+.+++++++|.++|++.|++++++.++.. +||+|+||++++++++
T Consensus 139 -----------------------------~~~~~s~~l~a~~~~~~~D~~~s~~vl~~~~~~~-~g~~~~D~i~aiii~~ 188 (299)
T PRK09509 139 -----------------------------VRKTQSQAVRADMLHYQSDVMMNGAILLALGLSW-YGWHRADALFALGIGI 188 (299)
T ss_pred -----------------------------HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHH
Confidence 0012467899999999999999999888877654 5999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCC---HHHHHH
Q 046783 732 LIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEAD---MVSIKA 808 (830)
Q Consensus 732 lIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~---~~~I~~ 808 (830)
+|++++++++|++.+.|||++|+ +++.+++++.++++|||.+++++|+|+.|+.. .+++||.++++.+ .++|.+
T Consensus 189 ~il~~~~~i~~~~~~~Ll~~~~~--~~~~~~I~~~i~~~~~v~~v~~l~~~~~G~~~-~v~v~i~v~~~~~~~e~h~i~~ 265 (299)
T PRK09509 189 YILYSALRMGYEAVQSLLDRALP--DEERQEIIDIVTSWPGVSGAHDLRTRQSGPTR-FIQLHLEMEDNLPLVQAHMIAD 265 (299)
T ss_pred HHHHHHHHHHHHHHHHHhccCCC--HHHHHHHHHHHHhCCCCcCceeeeeEeeCCeE-EEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999887 57889999999999999999999999988775 5699999998874 578999
Q ss_pred HHHHHHhc-CCCCeEEEEEEecC
Q 046783 809 QVSHMLSD-AGIKDLTLQVECVR 830 (830)
Q Consensus 809 ~V~~il~~-~gI~~vTIQiE~~~ 830 (830)
++++.+++ ++..+++||+||++
T Consensus 266 ~ie~~l~~~~~~~~v~ihveP~~ 288 (299)
T PRK09509 266 QVEQALLRRFPGSDVIIHQDPCS 288 (299)
T ss_pred HHHHHHHHhCCCCEEEEEeCCCC
Confidence 99999975 56678999999853
No 7
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=366.05 Aligned_cols=276 Identities=23% Similarity=0.382 Sum_probs=250.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHH
Q 046783 413 RKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNA 492 (830)
Q Consensus 413 ~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~a 492 (830)
...|..+++++.|++++++|+++|+++||.||+|||+|+++|++++++.++++++|+||||++|||||+|+|++++++++
T Consensus 10 ~~~~~~~~sl~~nl~l~~~K~~~g~~~gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~k~E~l~sl~~~ 89 (304)
T COG0053 10 LVRRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHGKAETLASLIVS 89 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHHHH
Confidence 34555678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccchhHH-HHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCC
Q 046783 493 VFLVLVGALIVLESFERILDPQEISTNSL-LTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHD 571 (830)
Q Consensus 493 i~Ll~i~~~Il~EsI~rLi~p~~i~~~~l-l~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~ 571 (830)
++++++|+++++|++.+++.|++++.+.+ +.+++++.++|.....+.++.
T Consensus 90 ~~i~~~g~~i~~~a~~~~~~~~~~~~~~~~~~v~l~s~~~~~~l~~~~~~~----------------------------- 140 (304)
T COG0053 90 ILIFAAGFEILLEAIKRLISPQPVEPPLLALGVALISIVIKEALYRYLRRV----------------------------- 140 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 99999999999999999999888887665 889999999999988887651
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCCCC
Q 046783 572 HEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHH 651 (830)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 651 (830)
T Consensus 141 -------------------------------------------------------------------------------- 140 (304)
T COG0053 141 -------------------------------------------------------------------------------- 140 (304)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHHHHHH
Q 046783 652 HPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLVADPACSIFISL 731 (830)
Q Consensus 652 h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~~~DPi~SiiIsi 731 (830)
.++..+..++++..|.+.|.++|++++++.+ ..++||+|+||+++++|++
T Consensus 141 -----------------------------~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~-~~~~g~~~lD~i~a~~I~~ 190 (304)
T COG0053 141 -----------------------------GKKTNSQALIADALHHRSDVLTSLAVLVGLL-GSLLGWPWLDPLAALLISL 190 (304)
T ss_pred -----------------------------HHHhCCHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhCcHHHHHHHHHHHHH
Confidence 0123456899999999999999999999999 7778999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCC---HHHHHH
Q 046783 732 LIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEAD---MVSIKA 808 (830)
Q Consensus 732 lIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~---~~~I~~ 808 (830)
+|+++++.++|++...|||+.++ +++.+++++.+.+.|||.++|+++.++.| +.+.+++|++++++++ .++|.+
T Consensus 191 ~Il~~~~~~~~~s~~~L~d~~~~--~~~~~~i~~~i~~~~~V~~v~~lr~R~~G-~~~~id~~i~v~~~ls~~eah~I~~ 267 (304)
T COG0053 191 YILKTGFRLFKESVNELMDAALD--PEDLEKIRAIILSVPGVKGVHDLRTRKSG-SRIFIDVHIEVDPDLSLEEAHEIAD 267 (304)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCC--HHHHHHHHHHHhcCCcceeeecceeeeeC-CeEEEEEEEEECCCCChHHHHHHHH
Confidence 99999999999999999997766 58899999999999999999999999755 5677799999999985 578999
Q ss_pred HHHHHHhc-CC-CCeEEEEEEecC
Q 046783 809 QVSHMLSD-AG-IKDLTLQVECVR 830 (830)
Q Consensus 809 ~V~~il~~-~g-I~~vTIQiE~~~ 830 (830)
++++.+++ .+ +.+++||+||.+
T Consensus 268 ~ie~~i~~~~~~~~~v~IhveP~~ 291 (304)
T COG0053 268 EVEKRIKKEFPKVADVTIHVEPLG 291 (304)
T ss_pred HHHHHHHHhcCCCceEEEEecCCc
Confidence 99999875 45 899999999863
No 8
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=100.00 E-value=3.4e-40 Score=350.95 Aligned_cols=261 Identities=36% Similarity=0.620 Sum_probs=235.6
Q ss_pred HHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046783 428 YMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESF 507 (830)
Q Consensus 428 l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI 507 (830)
++++|+++|+++||++|+|||+|++.|++++++.+++.++++||+|++|||||+|+|++++++++++++++++++++|++
T Consensus 2 l~~~k~~~g~~~~S~allada~~s~~D~~~~~~~l~~~~~~~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~si 81 (268)
T TIGR01297 2 LMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEILAALLNGLFLVVVALFILYEAI 81 (268)
T ss_pred EEEeehHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCcc-chhHHHHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 046783 508 ERILDPQEI-STNSLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHDHEGHGKRQECISISH 586 (830)
Q Consensus 508 ~rLi~p~~i-~~~~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~~~~~~~~~~~~~~~~ 586 (830)
+++++|++. .....++++++++++|++..++.++.
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------------------------------------- 117 (268)
T TIGR01297 82 ERLINPEPEIDGGTMLIVAIVGLIVNLILALYLHRV-------------------------------------------- 117 (268)
T ss_pred HHHhCCCCcccchhHHHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Confidence 999998744 44456788999999999988877641
Q ss_pred ccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCC
Q 046783 587 ESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHHHPANHNFHAHEHDDH 666 (830)
Q Consensus 587 ~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~h~~~~~~~~h~~~~~ 666 (830)
T Consensus 118 -------------------------------------------------------------------------------- 117 (268)
T TIGR01297 118 -------------------------------------------------------------------------------- 117 (268)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHHHHHHHHHHhHHHHHHHHHH
Q 046783 667 DHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLVADPACSIFISLLIVSSVIPLLRNSAE 746 (830)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~~~DPi~SiiIsilIl~sa~pLlk~s~~ 746 (830)
+++.+|.++++++.|.++|+++|++++++..+..++ |+|+||+++++++++|++++++++|++.+
T Consensus 118 --------------~~~~~s~~l~a~~~~~~~D~~~s~~vli~~~~~~~~-~~~~D~l~~i~i~~~i~~~~~~l~~~~~~ 182 (268)
T TIGR01297 118 --------------GHRLGSLALRAAALHVLSDALSSVGVLIGALLIYFG-WHWADPIAALLISLLILYTAFRLLKESIN 182 (268)
T ss_pred --------------CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001246789999999999999999999999998874 89999999999999999999999999999
Q ss_pred HHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCC---HHHHHHHHHHHHh-c-CCCCe
Q 046783 747 ILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEAD---MVSIKAQVSHMLS-D-AGIKD 821 (830)
Q Consensus 747 iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~---~~~I~~~V~~il~-~-~gI~~ 821 (830)
.|++..|+ ++.++++++.+++++||.+++++|+|+.|++++.+++||+++++.+ .+++.+++++.++ + .++.+
T Consensus 183 ~Ll~~~~~--~~~~~~i~~~i~~~~~v~~v~~~~~~~~G~~~~~v~~~v~v~~~~~~~~ah~i~~~i~~~i~~~~~~v~~ 260 (268)
T TIGR01297 183 VLLDAAPD--EEDLEEIKKAILSIPGVKGVHDLHIWRIGPGKLFLDVHVVVDPDLDLKQAHDIALEIEREILKRHPGIEH 260 (268)
T ss_pred HHhCCCCC--cccHHHHHHHHhcCCCcccceEeEEEEcCCCCEEEEEEEEECCCCChhHHHHHHHHHHHHHHHhcCCCCe
Confidence 99999987 5778899999999999999999999999987888899999999975 3688999988665 4 48999
Q ss_pred EEEEEEec
Q 046783 822 LTLQVECV 829 (830)
Q Consensus 822 vTIQiE~~ 829 (830)
+|||+||.
T Consensus 261 v~ih~ep~ 268 (268)
T TIGR01297 261 VTIQVEPC 268 (268)
T ss_pred EEEEeCCC
Confidence 99999984
No 9
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=100.00 E-value=1.3e-39 Score=348.67 Aligned_cols=275 Identities=27% Similarity=0.491 Sum_probs=238.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 046783 418 IALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVL 497 (830)
Q Consensus 418 l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~ 497 (830)
+++++++|++++++|+++|+++||.++++|++|++.|+++.++++++.+.+++|+|++|||||+|+|+++++++++++++
T Consensus 1 L~i~~~~~~~~~~~~~~~~~~t~S~al~~d~~~sl~d~~~~~~~l~~~~~~~~~~~~~~pfG~~r~e~l~~~~~~~~l~~ 80 (284)
T PF01545_consen 1 LIISLILNLILAVVKIIAGIITGSLALLADGLHSLADAISLLISLFALRIASKPPDKRYPFGYGRLEPLAALIVSILLIF 80 (284)
T ss_dssp -HHHHHHHCCTHHCTTCSS-SSSSS---SCCCHHHHHHHHHHHHHHHHHHHTSS-SSSSSSSSTTHHHHHHHHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccchhhhhhHhhhhhhhhHhh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccchhHH-HHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCCCCCCCCC
Q 046783 498 VGALIVLESFERILDPQEISTNSL-LTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHSHDHEGHG 576 (830)
Q Consensus 498 i~~~Il~EsI~rLi~p~~i~~~~l-l~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~~~~~~~~ 576 (830)
+++++++|++++++++++.+.+.+ +.++++++++|+++++++++.. +
T Consensus 81 ~~~~~~~~si~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~-~------------------------------- 128 (284)
T PF01545_consen 81 LGLFLIVESIQRLISPHEPSPPGIVLIVALVSIIVNLLLAWYLRRVG-K------------------------------- 128 (284)
T ss_dssp HHHHHHHHHTTTSSSSSSSSTTTS-THHHHHHHHHHHHHHHHHHHHH-H-------------------------------
T ss_pred hHHHHHHHHhhcccccccchhhhhhhhhhhhhhhHHHHHHHHHhhcc-c-------------------------------
Confidence 999999999999999987777654 5559999999999999987620 0
Q ss_pred CcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCCCC
Q 046783 577 KRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHYHHHPANH 656 (830)
Q Consensus 577 ~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~~~h~~~~ 656 (830)
T Consensus 129 -------------------------------------------------------------------------------- 128 (284)
T PF01545_consen 129 -------------------------------------------------------------------------------- 128 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-chhhhHHHHHHHHHH
Q 046783 657 NFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLV-ADPACSIFISLLIVS 735 (830)
Q Consensus 657 ~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~gw~~-~DPi~SiiIsilIl~ 735 (830)
..+.++.++++.++|.++|++.|++|+++.++..+.+|.+ +||++++++++++++
T Consensus 129 ------------------------~~~~~s~~l~~~~~~~~~d~~~s~~v~i~~~~~~~~~~~~~~D~v~~l~i~~~i~~ 184 (284)
T PF01545_consen 129 ------------------------RLQRRSPALRADALHSLIDVLSSLAVLISLLLAYLGPWFWYADPVASLLIALFILY 184 (284)
T ss_dssp ------------------------HS---SHHHHHHHHHHHHHTS-SSTS-SSSTSSSTT-STS-SSHHHHHHHHHHHHH
T ss_pred ------------------------ccccccccchhhhhhcccchhHHHHHHHHHHHHHHHhcccccchhhhhHHHHHHhh
Confidence 0011367999999999999999999999999998877776 999999999999999
Q ss_pred hHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCC---HHHHHHHHHH
Q 046783 736 SVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEAD---MVSIKAQVSH 812 (830)
Q Consensus 736 sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~---~~~I~~~V~~ 812 (830)
.+++++|++.+.|||++|+ ++..+++++.+++.|||.+++++|+|+.|++++.+++|++++++.+ .+++++++++
T Consensus 185 ~~~~~~~~~~~~Ll~~~~~--~~~~~~i~~~i~~~~~v~~v~~~~~~~~g~~~~~v~i~v~v~~~~~v~~~~~i~~~i~~ 262 (284)
T PF01545_consen 185 SGYPLIKESIRILLDASPD--PELVEKIRRIIESVPGVIEVHDLRVWQVGRNKYVVEIHVQVDPDMSVEEAHEIRERIEK 262 (284)
T ss_dssp HHHHHHHHHHHHHTT-SHH--HHHHHHHHHHHHHTSS-SEEEEEEEEEETT-EEEEEEEEEETTTSBHHHHHHHHHHHHH
T ss_pred hhhhchhhhhccccccccc--ccchhHHHHhhccCCceEeccceEEEEecCCcEEEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999987 5777889999989999999999999999998899999999999984 5689999999
Q ss_pred HHhc-C-CCCeEEEEEEecC
Q 046783 813 MLSD-A-GIKDLTLQVECVR 830 (830)
Q Consensus 813 il~~-~-gI~~vTIQiE~~~ 830 (830)
.+++ + +++++|||+||.+
T Consensus 263 ~l~~~~~~i~~v~I~~~p~~ 282 (284)
T PF01545_consen 263 RLREKFPGIYDVTIHIEPDE 282 (284)
T ss_dssp HHHHHSTTCEEEEEEEEECG
T ss_pred HHHHhCCCcEEEEEEEEecC
Confidence 9986 4 9999999999964
No 10
>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.8e-29 Score=276.90 Aligned_cols=273 Identities=17% Similarity=0.219 Sum_probs=225.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q 046783 410 LSERKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGY 489 (830)
Q Consensus 410 ~~~~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laal 489 (830)
+++.+.|..++.+++|++++++|+++|+.+||++++||++|++.|.++.++.|+.++++++|++.+||||++|+|+++.+
T Consensus 109 ~~~~~~~~~~i~l~~Nigl~vaK~~as~~sgS~aIiAsavdSl~Dl~s~fvll~s~~~~~k~~~~~YP~G~~r~EtvG~i 188 (412)
T KOG1485|consen 109 LKNAERRAAWIGLAANIGLAVAKVVASYLSGSMAIIASAVDSLSDLVSGFVLLFSLRAAKKKPTYEYPRGRGRVETVGLI 188 (412)
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCCCcccchhHH
Confidence 34455666677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcc----chh--------HHHHHHHHHHHHHHHHHHHHhhccccccCCccccCCCC
Q 046783 490 TNAVFLVLVGALIVLESFERILDPQEI----STN--------SLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSH 557 (830)
Q Consensus 490 v~ai~Ll~i~~~Il~EsI~rLi~p~~i----~~~--------~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h 557 (830)
+++.+|..+++.|+.+++.++.+|... ..+ +++++++....+.+..++++..
T Consensus 189 ~~S~iMa~agv~ii~sSl~~i~~~~~~~~~~~~~q~~~~~a~~~i~i~is~~~vk~~l~~~c~~---------------- 252 (412)
T KOG1485|consen 189 AVSVIMAMAGVQIIWSSLRLIVGPHAIGHHHNPSQLIFINALWLIAIMISAKEVKLRLTLYCAI---------------- 252 (412)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhcccccccccCchhhcccchhhhheehhhHHHHHHHHHHHHHH----------------
Confidence 999999999999999999999873211 111 2223333333333333333321
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCC
Q 046783 558 SHSHPHHHHQHSHDHEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHS 637 (830)
Q Consensus 558 ~~sh~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 637 (830)
T Consensus 253 -------------------------------------------------------------------------------- 252 (412)
T KOG1485|consen 253 -------------------------------------------------------------------------------- 252 (412)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 046783 638 HRDHTHKHNNHYHHHPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKG 717 (830)
Q Consensus 638 ~~~~~h~~~~~~~~h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~g 717 (830)
++.|..+++.+.|.+.|++++..+++++.+.++ .
T Consensus 253 ---------------------------------------------~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~~-~ 286 (412)
T KOG1485|consen 253 ---------------------------------------------KTNSNIVRANAWDHRNDVLTNSVALVAASLAYY-Y 286 (412)
T ss_pred ---------------------------------------------hcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-h
Confidence 012357899999999999999999999999887 5
Q ss_pred CccchhhhHHHHHHHHHHhHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHcc-cCcceeeEEEEEEEcCCeEEEEEEE
Q 046783 718 WLVADPACSIFISLLIVSSVIPLLRNSAEILLQR-VSRAHELDLKETLNDVMKI-SGVHGIQNLHLWSFTSTDVVGTLNL 795 (830)
Q Consensus 718 w~~~DPi~SiiIsilIl~sa~pLlk~s~~iLLq~-~P~~~e~~l~~i~~~i~~i-~GV~~V~dlhiW~l~~~~~V~svHV 795 (830)
|+|+||++++++|++|++++....+++...|.++ +|+ +.++.+.....+. +++..++.++.+.++...+| ++|+
T Consensus 287 ~~~lDP~gailVS~~ii~t~~~t~~~~i~~Lvg~~a~p---e~L~~~~~~~l~~~~~i~~idtv~~y~~g~~~~V-ev~i 362 (412)
T KOG1485|consen 287 NYWLDPIGAILVSTYIIYTGGRTGLENIKELVGRSAPP---EYLEIITYLILQHGKLIKHIDTVRAYTFGSHYFV-EVHI 362 (412)
T ss_pred hhcccchhhhhhheehhhhhhHHHHHHHHHHhCCCCCH---HHHHHHHHHHHhhcCccccceeeeeecccceEEE-EEee
Confidence 6899999999999999999999999999999987 555 4455555554444 69999999999999987776 9999
Q ss_pred EECCCCC---HHHHHHHHHHHHhcC-CCCeEEEEEEe
Q 046783 796 HVSSEAD---MVSIKAQVSHMLSDA-GIKDLTLQVEC 828 (830)
Q Consensus 796 ~V~~~~~---~~~I~~~V~~il~~~-gI~~vTIQiE~ 828 (830)
+++++.+ .++|.+-+++.++.. .+.++.||+|+
T Consensus 363 vl~~~~~l~~ah~i~E~lq~~ie~l~ever~fvh~d~ 399 (412)
T KOG1485|consen 363 VLDEDLSLSVAHDIGETLQKKIELLPEVERAFVHIDY 399 (412)
T ss_pred ecCCCCccHHHHHHHHHHHHHHhhcchheeeeeecCc
Confidence 9999986 468888888888876 68888988875
No 11
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=99.85 E-value=6.7e-20 Score=189.21 Aligned_cols=275 Identities=14% Similarity=0.177 Sum_probs=229.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCchhHHHHHHHHH
Q 046783 412 ERKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISR-LPANSQFNYGRGRFEVLSGYT 490 (830)
Q Consensus 412 ~~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~-~p~d~~~~yG~~R~E~Laalv 490 (830)
..|++.+..+++...+++.+.+++|+++||.+++-||+.++.|+....++|...+... +|.|.+||||++-+|++.-.+
T Consensus 16 ~~eq~~L~~Si~~tvi~A~~GIi~GL~~gS~~IiFDGvYSl~da~mtllsL~vsrli~~~p~~~RF~~GfwhlEplvL~i 95 (314)
T COG3965 16 SNEQLYLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVLAI 95 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcceEEEeccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchhhhhhhHhhh
Confidence 3455667789999999999999999999999999999999999999999999998877 777789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC-ccchhHHHHHHHHHHHHHHHHHHHHhhccccccCCccccCCCCCCCCCCCCCCCC
Q 046783 491 NAVFLVLVGALIVLESFERILDPQ-EISTNSLLTVSIGGLLVNVIGLIFFHEEHHHAHGGVCSHSHSHSHSHPHHHHQHS 569 (830)
Q Consensus 491 ~ai~Ll~i~~~Il~EsI~rLi~p~-~i~~~~ll~Vsi~gLivNlv~~~~~~~~h~H~Hgg~~~h~h~h~~sh~~~h~~~~ 569 (830)
++.++..++.+-++.|+..++++. +++....++++.+...++...+++.++-
T Consensus 96 ng~ll~ll~lyAlinAl~~l~dGGR~v~~~~ai~yt~~s~~~Ca~~~~~~~r~--------------------------- 148 (314)
T COG3965 96 NGTLLALLCLYALINALGSLLDGGREVEPGHAIAYTLVSVTGCAAIAWKLRRL--------------------------- 148 (314)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHhh---------------------------
Confidence 999999999999999999999965 7787888888888888888777776541
Q ss_pred CCCCCCCCcccccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCCCCCCCCCCCCCCCcccccCCCCC
Q 046783 570 HDHEGHGKRQECISISHESNEKSCSSHDHHHCTGHTAHHHGRRDHCDSTLKHEHTHGYDDQGLGDQHSHRDHTHKHNNHY 649 (830)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~h~~~~~~ 649 (830)
T Consensus 149 -------------------------------------------------------------------------------- 148 (314)
T COG3965 149 -------------------------------------------------------------------------------- 148 (314)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh---C--C--ccch
Q 046783 650 HHHPANHNFHAHEHDDHDHHHHADHHEPLKHDRRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYK---G--W--LVAD 722 (830)
Q Consensus 650 ~~h~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~nm~~vflHvlaD~lgSVgViIs~lli~~~---g--w--~~~D 722 (830)
+|+.+|.-+..+.-.++-|++-|.+++++.+..+.. . | .|+|
T Consensus 149 -------------------------------nrr~~s~lIald~kqW~Mst~lS~al~VaF~~a~~l~~T~~a~l~~Y~D 197 (314)
T COG3965 149 -------------------------------NRRLKSPLIALDTKQWLMSTCLSAALFVAFAAAWLLAGTKFAHLVVYAD 197 (314)
T ss_pred -------------------------------hccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhcccC
Confidence 112245566667777999999999999998887643 2 2 5999
Q ss_pred hhhHHHHHHHHHHhHHHHHHHHHHHHHhcccccchhhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCC
Q 046783 723 PACSIFISLLIVSSVIPLLRNSAEILLQRVSRAHELDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEAD 802 (830)
Q Consensus 723 Pi~SiiIsilIl~sa~pLlk~s~~iLLq~~P~~~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~ 802 (830)
|..-.+++++++...+..+|.+.+..|+.+|.+..+.++....++.+-.|..+++. .+-+.|.+..+ ++|+.++++.+
T Consensus 198 PmvlaL~~~v~IplPlg~vk~al~eiLlmtP~el~q~ies~~~~~v~k~~f~~~~~-yvArVGr~l~I-Ei~fiip~~~~ 275 (314)
T COG3965 198 PMVLALVCLVFIPLPLGTVKSALREILLMTPNELQQSIESHAHEIVEKYGFPSYHV-YVARVGRGLFI-EIHFIIPRESD 275 (314)
T ss_pred HHHHHHHHHheeeccHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCchHHH-HHHHhccceEE-EEEEEeCCccC
Confidence 99999999999999999999999999999999777777777777777777766553 46677888776 99999988764
Q ss_pred ------HHHHHHHHHHHHhcCCCC-eEEEEE
Q 046783 803 ------MVSIKAQVSHMLSDAGIK-DLTLQV 826 (830)
Q Consensus 803 ------~~~I~~~V~~il~~~gI~-~vTIQi 826 (830)
.++|++++.+.+.+.|-+ -+||-+
T Consensus 276 ar~Ved~d~Irdei~~slg~~g~~rwltvsf 306 (314)
T COG3965 276 ARNVEDWDDIRDEIGQSLGSLGYERWLTVSF 306 (314)
T ss_pred CccchhHHHHHHHHHHHhhcCCcCceEEEEE
Confidence 468888888888877533 355543
No 12
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=99.65 E-value=2.6e-15 Score=163.90 Aligned_cols=198 Identities=16% Similarity=0.135 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHH
Q 046783 270 QVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVC 349 (830)
Q Consensus 270 Rl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~ 349 (830)
|-.++.+++.+++++..|++.+++++|....+|+.+|.+|.+..++ .+||+.+...++|++ |||+|.|.|++++++.
T Consensus 12 ~~~~~~sl~~nl~l~~~K~~~g~~~gS~ALlADaihs~~D~~~si~--~l~~l~~s~kp~d~~-HpyGh~k~E~l~sl~~ 88 (304)
T COG0053 12 RRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLI--VLIGLRISSKPPDRD-HPYGHGKAETLASLIV 88 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCCC-CCCCchhHHHHHHHHH
Confidence 4489999999999999999999999999999999999999999999 999999999999999 9999999999999999
Q ss_pred HHHHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 046783 350 TIVLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYM 429 (830)
Q Consensus 350 alvL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~ 429 (830)
++++. +..+.+..++..++..+.. ....... -.....++++|..+.
T Consensus 89 ~~~i~---------------~~g~~i~~~a~~~~~~~~~---~~~~~~~----------------~~v~l~s~~~~~~l~ 134 (304)
T COG0053 89 SILIF---------------AAGFEILLEAIKRLISPQP---VEPPLLA----------------LGVALISIVIKEALY 134 (304)
T ss_pred HHHHH---------------HHHHHHHHHHHHHHhCCCC---CCccHHH----------------HHHHHHHHHHHHHHH
Confidence 99887 3334444454444433110 1111111 111446788999999
Q ss_pred HHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046783 430 VVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFER 509 (830)
Q Consensus 430 ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~r 509 (830)
.++...|.-+||.+|.||+.|..+|+++++.+++|+... -+|+..++++++++++++++..++.+++|++..
T Consensus 135 ~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~~~--------~~g~~~lD~i~a~~I~~~Il~~~~~~~~~s~~~ 206 (304)
T COG0053 135 RYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLLGS--------LLGWPWLDPLAALLISLYILKTGFRLFKESVNE 206 (304)
T ss_pred HHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999833 378999999999999999999999999999999
Q ss_pred hcC
Q 046783 510 ILD 512 (830)
Q Consensus 510 Li~ 512 (830)
|+|
T Consensus 207 L~d 209 (304)
T COG0053 207 LMD 209 (304)
T ss_pred HhC
Confidence 998
No 13
>KOG2802 consensus Membrane protein HUEL (cation efflux superfamily) [General function prediction only]
Probab=99.56 E-value=2e-14 Score=154.66 Aligned_cols=123 Identities=19% Similarity=0.207 Sum_probs=105.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHH
Q 046783 413 RKSRKIALFLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNA 492 (830)
Q Consensus 413 ~~~r~l~~~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~a 492 (830)
...|.+.+++++|++-+.+|+.+++.+||-.|+|+++|+++|.+++++..+|++.+.|.||..|||||.+..++++++.+
T Consensus 204 ~s~rvVatAi~iN~l~~~~Kfg~w~~tgShsmfAEaIHS~aD~~NQ~lLa~Gis~S~q~PD~lhPYGYsnmRyVsSLISg 283 (503)
T KOG2802|consen 204 GSGRVVATAICINGLNCFFKFGAWIYTGSHSMFAEAIHSLADTCNQLLLALGISKSVQTPDPLHPYGYSNMRYVSSLISG 283 (503)
T ss_pred CCCceehhHHHHHHHHHHHHhhHhhhcccHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCcccchhHHHHHHhc
Confidence 34566778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HHHHHHHHHhhcCCCccchhHH-HHHHHHHHHHHHHH
Q 046783 493 VFLVLVG-ALIVLESFERILDPQEISTNSL-LTVSIGGLLVNVIG 535 (830)
Q Consensus 493 i~Ll~i~-~~Il~EsI~rLi~p~~i~~~~l-l~Vsi~gLivNlv~ 535 (830)
+-++.+| ..-++.+|..|++|++++.-.+ ..+-.++++.....
T Consensus 284 vGIfc~G~GlSiyhGv~gLlhpePi~~l~~ay~il~gSl~~eGas 328 (503)
T KOG2802|consen 284 VGIFCMGCGLSIYHGVMGLLHPEPIESLLWAYCILAGSLVSEGAS 328 (503)
T ss_pred cceeeecccchhhhccccccCCCCCcchHHHHHHHhhHHHhcchH
Confidence 8887554 4458999999999999876544 33334444444333
No 14
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=99.49 E-value=6.5e-13 Score=144.85 Aligned_cols=199 Identities=15% Similarity=0.080 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHH
Q 046783 270 QVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVC 349 (830)
Q Consensus 270 Rl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~ 349 (830)
|..++.+++.+++++..+++.++.++|....+|+.+|+.+++..++ .+++..+..+++|++ ||+++.|+|++++++.
T Consensus 10 ~~~~~~~~~~n~~l~i~k~~~g~~sgS~allaDa~hsl~D~~~~~l--~l~~~~~s~k~~d~~-~pyG~~r~E~l~~l~~ 86 (299)
T PRK09509 10 SRAAIAATAMASLLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLT--NLLVVRYSLQPADDE-HTFGHGKAESLAALAQ 86 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCCCCC-CCCccHHHHHHHHHHH
Confidence 3489999999999999999999999999999999999999998888 788888999999998 9999999999999988
Q ss_pred HHHHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 046783 350 TIVLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYM 429 (830)
Q Consensus 350 alvL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~ 429 (830)
++++. ....++..+..+++.++-. ........ -....++++|.++.
T Consensus 87 ~~~l~---------------~~~~~~~~esi~~l~~~~~---~~~~~~~l----------------~~~~~~~v~~~~~~ 132 (299)
T PRK09509 87 SMFIS---------------GSALFLFLTGIQHLISPTP---MNDPGVGI----------------IVTLVALICTLILV 132 (299)
T ss_pred HHHHH---------------HHHHHHHHHHHHHHcCCCC---CCcchhHH----------------HHHHHHHHHHHHHH
Confidence 88776 2233444445555433111 00000000 01345677888888
Q ss_pred HHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046783 430 VVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFER 509 (830)
Q Consensus 430 ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~r 509 (830)
..+...+..++|.++.||+.|++.|+++++..++++..+. +|+.++|++++++.+++++..++.+++|++..
T Consensus 133 ~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vl~~~~~~~--------~g~~~~D~i~aiii~~~il~~~~~i~~~~~~~ 204 (299)
T PRK09509 133 TFQRWVVRKTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYILYSALRMGYEAVQS 204 (299)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999988874 58899999999999999999999999999999
Q ss_pred hcCC
Q 046783 510 ILDP 513 (830)
Q Consensus 510 Li~p 513 (830)
|++.
T Consensus 205 Ll~~ 208 (299)
T PRK09509 205 LLDR 208 (299)
T ss_pred Hhcc
Confidence 9984
No 15
>PRK03557 zinc transporter ZitB; Provisional
Probab=99.34 E-value=1.2e-11 Score=135.89 Aligned_cols=196 Identities=14% Similarity=0.079 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHHH
Q 046783 272 RLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVCTI 351 (830)
Q Consensus 272 ~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~al 351 (830)
..+..++.+++++..+++.++.++|....+|+.+|+.|.+..++ .++++.+..+++|++ |||++.|.|++.+++.++
T Consensus 20 ~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~--~l~a~~~s~kp~d~~-hpyG~~r~E~l~al~~~~ 96 (312)
T PRK03557 20 RLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLF--ALLAVQFSRRPPTIR-HTFGWLRLTTLAAFVNAI 96 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCCC-CCCchHHHHHHHHHHHHH
Confidence 46778888888999999999999999999999999999999888 788889999999998 999999999999999998
Q ss_pred HHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 046783 352 VLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYMVV 431 (830)
Q Consensus 352 vL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~iv 431 (830)
++. ++++++..++.+++.++.. ... .... -....++++|++....
T Consensus 97 ~l~---------------~~~~~i~~eai~~l~~~~~---~~~-~~~~----------------~v~~~~~~~~~~~~~~ 141 (312)
T PRK03557 97 ALV---------------VITILIVWEAIERFRTPRP---VAG-GMMM----------------AIAVAGLLANILSFWL 141 (312)
T ss_pred HHH---------------HHHHHHHHHHHHHHcCCcc---ccc-hHHH----------------HHHHHHHHHHHHHHHH
Confidence 887 3334455555555432110 000 0000 0012345566544333
Q ss_pred HHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046783 432 EFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFERIL 511 (830)
Q Consensus 432 el~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi 511 (830)
.. -+.-.+|.++.||+.|.+.|+++++.++++...... +|+..++++++++.+++++..++.+++|++..|+
T Consensus 142 ~~-~~~~~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~~-------~g~~~~Dpi~~ilis~~i~~~~~~l~~~~~~~Ll 213 (312)
T PRK03557 142 LH-HGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIW-------TGWTPADPILSILVSVLVLRSAWRLLKESVNELL 213 (312)
T ss_pred Hh-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 244568899999999999999999999998876642 3566799999999999999999999999999999
Q ss_pred CC
Q 046783 512 DP 513 (830)
Q Consensus 512 ~p 513 (830)
+.
T Consensus 214 d~ 215 (312)
T PRK03557 214 EG 215 (312)
T ss_pred cc
Confidence 74
No 16
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=99.29 E-value=1.3e-11 Score=131.89 Aligned_cols=186 Identities=14% Similarity=0.127 Sum_probs=150.8
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHHHHHHHhhcCchhh
Q 046783 284 SVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVCTIVLELFYYPELSL 363 (830)
Q Consensus 284 ~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~alvL~~~~~~~~sl 363 (830)
+..+++.++.++|....+|+.+|..+....++ .++|..+..+++|++ +|+++.|.|++.+++.++++.
T Consensus 3 ~~~k~~~g~~~~S~allada~~s~~D~~~~~~--~l~~~~~~~~~~d~~-~pyG~~r~E~l~~l~~~~~l~--------- 70 (268)
T TIGR01297 3 MLIKIVGGLLSGSLALLADAIHSLSDVAASAI--ALLALRISRRPADER-HPFGHGRAEILAALLNGLFLV--------- 70 (268)
T ss_pred EEeehHHHHHhccHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCCCCC-CCCchHHHHHHHHHHHHHHHH---------
Confidence 45678888999999999999999999998888 888888998898998 999999999999999988877
Q ss_pred hhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhchHH
Q 046783 364 WGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYMVVEFVAGFMSNSLG 443 (830)
Q Consensus 364 sG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~ivel~~G~lsgSla 443 (830)
..++++..+..+++.++-. .. .... .-.....++++|+++...+...|...+|.+
T Consensus 71 ------~~~~~~~~~si~~l~~~~~---~~--~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~~~~s~~ 125 (268)
T TIGR01297 71 ------VVALFILYEAIERLINPEP---EI--DGGT--------------MLIVAIVGLIVNLILALYLHRVGHRLGSLA 125 (268)
T ss_pred ------HHHHHHHHHHHHHHhCCCC---cc--cchh--------------HHHHHHHHHHHHHHHHHHHHHhCccCCCHH
Confidence 2233444444444432110 00 0000 001134568889999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 046783 444 LISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFERILDPQ 514 (830)
Q Consensus 444 LiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~p~ 514 (830)
+.||+.|.+.|+++++..+++...+. ||+.++|++++++.+++++..++.++++++..+++..
T Consensus 126 l~a~~~~~~~D~~~s~~vli~~~~~~--------~~~~~~D~l~~i~i~~~i~~~~~~l~~~~~~~Ll~~~ 188 (268)
T TIGR01297 126 LRAAALHVLSDALSSVGVLIGALLIY--------FGWHWADPIAALLISLLILYTAFRLLKESINVLLDAA 188 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999998885 6688999999999999999999999999999999854
No 17
>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=98.68 E-value=1.1e-07 Score=106.10 Aligned_cols=209 Identities=12% Similarity=0.099 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHH
Q 046783 268 QKQVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTL 347 (830)
Q Consensus 268 ~KRl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~af 347 (830)
++|.-+..++.+++.|+.-+.+.+.+++|....+|..+|++|+..-++ ..|.+.........+ .|+|..|++.+..+
T Consensus 112 ~~~~~~~i~l~~Nigl~vaK~~as~~sgS~aIiAsavdSl~Dl~s~fv--ll~s~~~~~k~~~~~-YP~G~~r~EtvG~i 188 (412)
T KOG1485|consen 112 AERRAAWIGLAANIGLAVAKVVASYLSGSMAIIASAVDSLSDLVSGFV--LLFSLRAAKKKPTYE-YPRGRGRVETVGLI 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCChhh-CCCCCCcccchhHH
Confidence 567789999999999999999999999999999999999999999988 777677777777777 89999999999999
Q ss_pred HHHHHHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHH
Q 046783 348 VCTIVLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTG 427 (830)
Q Consensus 348 l~alvL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~ 427 (830)
+++.+|+... .++....++.... ...+ .+ ..+.++... ++ .-..+.+.+.....
T Consensus 189 ~~S~iMa~ag------v~ii~sSl~~i~~---~~~~---~~--~~~~~q~~~--~~----------a~~~i~i~is~~~v 242 (412)
T KOG1485|consen 189 AVSVIMAMAG------VQIIWSSLRLIVG---PHAI---GH--HHNPSQLIF--IN----------ALWLIAIMISAKEV 242 (412)
T ss_pred HHHHHHHHHH------HHHHHHhHHhhhc---cccc---cc--ccCchhhcc--cc----------hhhhheehhhHHHH
Confidence 9999998321 1222222221111 0000 00 011111000 00 00112223334445
Q ss_pred HHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046783 428 YMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESF 507 (830)
Q Consensus 428 l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI 507 (830)
.+..-...+..++|-.+.|-|.|-.+|+++..++|+|+..+. |.++.++++++++++++++..++--..+++
T Consensus 243 k~~l~~~c~~~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~--------~~~~~lDP~gailVS~~ii~t~~~t~~~~i 314 (412)
T KOG1485|consen 243 KLRLTLYCAIKTNSNIVRANAWDHRNDVLTNSVALVAASLAY--------YYNYWLDPIGAILVSTYIIYTGGRTGLENI 314 (412)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHH--------hhhhcccchhhhhhheehhhhhhHHHHHHH
Confidence 555556778889999999999999999999999999999995 566899999999999999999999999999
Q ss_pred HhhcCC
Q 046783 508 ERILDP 513 (830)
Q Consensus 508 ~rLi~p 513 (830)
..|++.
T Consensus 315 ~~Lvg~ 320 (412)
T KOG1485|consen 315 KELVGR 320 (412)
T ss_pred HHHhCC
Confidence 999975
No 18
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=98.59 E-value=4.2e-08 Score=105.55 Aligned_cols=197 Identities=18% Similarity=0.144 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHHHHH
Q 046783 274 ISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVCTIVL 353 (830)
Q Consensus 274 l~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~alvL 353 (830)
+.+++.+++++..+++.+++++|.....|..++..+.+..++ .+++..+...+++++ +|++..|.|.+.+|..++++
T Consensus 2 ~i~~~~~~~~~~~~~~~~~~t~S~al~~d~~~sl~d~~~~~~--~l~~~~~~~~~~~~~-~pfG~~r~e~l~~~~~~~~l 78 (284)
T PF01545_consen 2 IISLILNLILAVVKIIAGIITGSLALLADGLHSLADAISLLI--SLFALRIASKPPDKR-YPFGYGRLEPLAALIVSILL 78 (284)
T ss_dssp HHHHHHHCCTHHCTTCSS-SSSSS---SCCCHHHHHHHHHHH--HHHHHHHHTSS-SSS-SSSSSTTHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--HHHHHHHhhccCccc-cccchhhhhhHhhhhhhhhH
Confidence 456788888999999999999999999999999999888888 677778888888888 99999999999999998888
Q ss_pred HHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 046783 354 ELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYMVVEF 433 (830)
Q Consensus 354 ~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~ivel 433 (830)
. +.++++..++.+++.+... . ........ ....++++|+++.....
T Consensus 79 ~---------------~~~~~~~~~si~~~~~~~~-~--~~~~~~l~----------------v~~~~~~~~~~~~~~~~ 124 (284)
T PF01545_consen 79 I---------------FLGLFLIVESIQRLISPHE-P--SPPGIVLI----------------VALVSIIVNLLLAWYLR 124 (284)
T ss_dssp H---------------HHHHHHHHHHTTTSSSSSS-S--STTTS-TH----------------HHHHHHHHHHHHHHHHH
T ss_pred h---------------hhHHHHHHHHhhccccccc-c--hhhhhhhh----------------hhhhhhhHHHHHHHHHh
Confidence 7 3334444455555444311 1 11111100 13455777777777777
Q ss_pred HHHHhhc--hHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046783 434 VAGFMSN--SLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRG-RFEVLSGYTNAVFLVLVGALIVLESFERI 510 (830)
Q Consensus 434 ~~G~lsg--SlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~-R~E~Laalv~ai~Ll~i~~~Il~EsI~rL 510 (830)
-.|--.+ |..+.+|+.|.+.|.+.++.++++....... ++. -+|++++++.+++++..++-++++++..|
T Consensus 125 ~~~~~~~~~s~~l~~~~~~~~~d~~~s~~v~i~~~~~~~~-------~~~~~~D~v~~l~i~~~i~~~~~~~~~~~~~~L 197 (284)
T PF01545_consen 125 RVGKRLQRRSPALRADALHSLIDVLSSLAVLISLLLAYLG-------PWFWYADPVASLLIALFILYSGYPLIKESIRIL 197 (284)
T ss_dssp HHHHHS---SHHHHHHHHHHHHHTS-SSTS-SSSTSSSTT--------STS-SSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccccchhhhhhcccchhHHHHHHHHHHHHHHH-------hcccccchhhhhHHHHHHhhhhhhchhhhhccc
Confidence 7766677 9999999999999999999998888766532 233 49999999999999999999999999999
Q ss_pred cCCC
Q 046783 511 LDPQ 514 (830)
Q Consensus 511 i~p~ 514 (830)
++..
T Consensus 198 l~~~ 201 (284)
T PF01545_consen 198 LDAS 201 (284)
T ss_dssp TT-S
T ss_pred cccc
Confidence 9864
No 19
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=98.49 E-value=2.2e-06 Score=93.27 Aligned_cols=205 Identities=11% Similarity=0.110 Sum_probs=154.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHH
Q 046783 268 QKQVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTL 347 (830)
Q Consensus 268 ~KRl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~af 347 (830)
.|| .-+..+.-+...+..=++.++.++|....+|+.+-.+|....++ .++.+.+..++.+++ -.|+..|.|.+++|
T Consensus 20 ~~r-~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~l--al~A~~~a~r~~~~~-~TfGy~R~eiLaa~ 95 (296)
T COG1230 20 NER-RLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLL--ALIAIKLARRPATKR-FTFGYKRLEILAAF 95 (296)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHH--HHHHHHHhcCCCCCC-CCccHhHHHHHHHH
Confidence 344 33444444455555556667778999999999999999887777 666677889898888 88999999999999
Q ss_pred HHHHHHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHH
Q 046783 348 VCTIVLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTG 427 (830)
Q Consensus 348 l~alvL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~ 427 (830)
+.+++|. ++.++|..|+.+|+.++.. .++..... ...+++++|++
T Consensus 96 ~nav~Li---------------~~s~~I~~EAi~R~~~P~~---i~~~~ml~-----------------va~~GL~vN~~ 140 (296)
T COG1230 96 LNALLLI---------------VVSLLILWEAIQRLLAPPP---IHYSGMLV-----------------VAIIGLVVNLV 140 (296)
T ss_pred HHHHHHH---------------HHHHHHHHHHHHHhcCCCC---CCccchHH-----------------HHHHHHHHHHH
Confidence 9999998 6677888898888765432 12111111 13456888887
Q ss_pred HHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046783 428 YMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESF 507 (830)
Q Consensus 428 l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI 507 (830)
.+.+-.-. -..++-+-+--+|.+.|++.++.++++....+ -+||..++++.+++.+++++..+..++.|+.
T Consensus 141 ~a~ll~~~--~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~-------~~~w~~~Dpi~si~i~~lil~~a~~l~k~s~ 211 (296)
T COG1230 141 SALLLHKG--HEENLNMRGAYLHVLGDALGSVGVIIAAIVIR-------FTGWSWLDPILSIVIALLILSSAWPLLKESL 211 (296)
T ss_pred HHHHhhCC--CcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 66553322 22378888999999999999999999877664 3577789999999999999999999999999
Q ss_pred HhhcCCC--ccchhH
Q 046783 508 ERILDPQ--EISTNS 520 (830)
Q Consensus 508 ~rLi~p~--~i~~~~ 520 (830)
.-+++.. .++...
T Consensus 212 ~iLle~~P~~id~~~ 226 (296)
T COG1230 212 NILLEGVPEGIDIDK 226 (296)
T ss_pred HHHhhcCCCccCHHH
Confidence 9998744 455443
No 20
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=96.26 E-value=0.037 Score=61.11 Aligned_cols=196 Identities=12% Similarity=0.074 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHHH
Q 046783 272 RLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVCTI 351 (830)
Q Consensus 272 ~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~al 351 (830)
.-...+.-+....-.-+..++.+.+.+..+|+.+-++|-...++ .++...+...+++.+ =+++-.|.|-++.|..++
T Consensus 36 ~if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~--gL~a~~is~~~~~~~-fsyG~~r~evLagF~n~v 112 (354)
T KOG1484|consen 36 SIFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLA--GLYASVISKWPANDK-FSYGYGRIEVLAGFVNGV 112 (354)
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHh--hhhHHHHhcCCCccc-cCcchhHHHHHHHHHHHH
Confidence 34445555555555555666677888888888777888766666 666666777777777 667889999999999999
Q ss_pred HHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHH-H
Q 046783 352 VLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYM-V 430 (830)
Q Consensus 352 vL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~-i 430 (830)
++. ...+.|..|..++++++ .+..++..... -..+++.|++-. .
T Consensus 113 flv---------------l~a~fi~~Es~eRl~~p---pei~t~rllvV-----------------S~~gllvnLvGi~a 157 (354)
T KOG1484|consen 113 FLV---------------LIAFFIFSESVERLFDP---PEIHTNRLLVV-----------------SVLGLLVNLVGILA 157 (354)
T ss_pred HHH---------------HHHHHHhHHHHHHhcCc---hhcCCceeEEe-----------------eHHHHHHHHHHHHH
Confidence 887 33455666666666553 12222221110 112333343211 1
Q ss_pred HHHHHHHhhch-----------------------------------HH-HHHhHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 046783 431 VEFVAGFMSNS-----------------------------------LG-LISDACHMLFDCAALAIGLYASYISRLPANS 474 (830)
Q Consensus 431 vel~~G~lsgS-----------------------------------la-LiADAlHsl~D~~s~~l~L~al~~s~~p~d~ 474 (830)
++-..+.-.|| -. +=.=-+|-++|.+.++..+++..+.+
T Consensus 158 F~h~~~h~hg~~~~s~~~~h~~~~~~~~~~~~~~~~~~~~~i~g~~~~~m~gifLHVLaDtlgSvGviist~Li~----- 232 (354)
T KOG1484|consen 158 FSHGHAHSHGSHHHSSHSGHLALLFHSLLGVWDLHHHAHGHIHGHSHENMPGIFLHVLADTLGSVGVIISTLLIK----- 232 (354)
T ss_pred hccccccccCCCCccccccchhccccccccccccccccccccCCcccccccchhHHHHHHHhcchHHHHHHHHHH-----
Confidence 11111222221 00 11234688999999999999988886
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 046783 475 QFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFERILD 512 (830)
Q Consensus 475 ~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~ 512 (830)
-|||..+|+++.++++++++...+-++.++..-|+.
T Consensus 233 --~~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq 268 (354)
T KOG1484|consen 233 --LFGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQ 268 (354)
T ss_pred --hcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 489999999999999999999999999999998886
No 21
>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]
Probab=93.68 E-value=0.56 Score=52.73 Aligned_cols=180 Identities=13% Similarity=0.109 Sum_probs=111.9
Q ss_pred hhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHHHHHHHhhcCchhhhhHHHHHhhh
Q 046783 294 FENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVTLVCTIVLELFYYPELSLWGLLLCVLLL 373 (830)
Q Consensus 294 ~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~afl~alvL~~~~~~~~slsG~Li~all~ 373 (830)
.+|.....|+.+-.++...-.+ -+|.+.+...++.++ -.++--|.|-+.+++|.+.+-. ..|+|+-..+
T Consensus 96 a~SLAImTDAaHlLsD~~sf~i--sl~slw~s~~pa~~r-~sfG~~R~Evlgal~Sv~~IW~-------~tgvLV~~Ai- 164 (379)
T KOG1482|consen 96 ANSLAIMTDAAHLLSDVASFII--SLFSLWLSSRPATKR-MSFGFHRAEVLGALVSVLLIWV-------VTGVLVYEAI- 164 (379)
T ss_pred ccchhhhhcchHHHHHHHHHHH--HHHHHHHccCCCCCc-eecceehHHHHHHHHHHHHHHH-------hhhhhHHHHH-
Confidence 3444455566666666543333 677788899999999 6677788999999988766531 1233322222
Q ss_pred eeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh--hc-----------
Q 046783 374 YFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLLINTGYMVVEFVAGFM--SN----------- 440 (830)
Q Consensus 374 ~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~iNl~l~ivel~~G~l--sg----------- 440 (830)
+++.+...|.+ ....... ....++.|+.+.++-...+-. .+
T Consensus 165 -------~Rl~s~~~ev~--g~~m~i~-----------------a~~gv~vNiim~~vL~~~~h~h~H~~~~s~g~~h~~ 218 (379)
T KOG1482|consen 165 -------QRLLSGDYEVN--GGIMLIT-----------------AAVGVAVNIIMGFVLHQSGHGHSHGGSHSHGHSHDH 218 (379)
T ss_pred -------hhhhcCceeec--ceEEEEE-----------------eehhhhhhhhhhhhhcccCCCCCCCCCCCcCccccc
Confidence 22211111110 0000000 112333444333332222100 00
Q ss_pred ----hHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 046783 441 ----SLGLISDACHMLFDCAALAIGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFERILDPQEI 516 (830)
Q Consensus 441 ----SlaLiADAlHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~p~~i 516 (830)
...+-|--+|-+.|.+=++-.++|..+.+ |.=+|.-++++..++.+++.++..+.|+++.+..|++..+-
T Consensus 219 ~~~~n~nvraAyiHVlGDliQSvGV~iaa~Ii~------f~P~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P~ 292 (379)
T KOG1482|consen 219 GEELNLNVRAAFVHVLGDLIQSVGVLIAALIIY------FKPEYKIADPICTFVFSIIVLGTTITILRDILGILMEGTPR 292 (379)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhheeEE------ecccceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCCc
Confidence 36667777899999999999999988887 44478899999999999999999999999999999986543
No 22
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=88.36 E-value=16 Score=39.91 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 046783 480 RGRFEVLSGYTNAVFLVLVGALIVLESFERILD 512 (830)
Q Consensus 480 ~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~ 512 (830)
...+..+.+|..|+++...-+-++-|+++.+-+
T Consensus 35 ~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~ 67 (317)
T PF02535_consen 35 KRILSLLNAFAAGVLLGTAFLHLLPEAIEALES 67 (317)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCchhhccccc
Confidence 446788888888888877777789999887754
No 23
>PRK10019 nickel/cobalt efflux protein RcnA; Provisional
Probab=84.71 E-value=51 Score=36.39 Aligned_cols=28 Identities=11% Similarity=0.129 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046783 482 RFEVLSGYTNAVFLVLVGALIVLESFER 509 (830)
Q Consensus 482 R~E~Laalv~ai~Ll~i~~~Il~EsI~r 509 (830)
+.|.....+++++++.+|+++++...++
T Consensus 85 ~~~~~le~~S~~lii~lGl~ll~r~~r~ 112 (279)
T PRK10019 85 SAEPWLQLISAVIIISTAFWMFWRTWRG 112 (279)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666677777888888888877765
No 24
>PF03824 NicO: High-affinity nickel-transport protein; InterPro: IPR011541 High affinity nickel transporters are involved in the incorporation of nickel into H2-uptake hydrogenase [, ] and urease [] enzymes and are essential for the expression of catalytically active hydrogenase and urease. Ion uptake is dependent on proton motive force. HoxN in Ralstonia eutropha (Alcaligenes eutrophus) is thought to be an integral membrane protein with seven transmembrane helices []. The family also includes a cobalt transporter. ; GO: 0046872 metal ion binding, 0030001 metal ion transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=79.35 E-value=81 Score=34.37 Aligned_cols=25 Identities=24% Similarity=0.288 Sum_probs=14.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcccc
Q 046783 730 SLLIVSSVIPLLRNSAEILLQRVSR 754 (830)
Q Consensus 730 silIl~sa~pLlk~s~~iLLq~~P~ 754 (830)
++.+..+.+-.+-...+.+.++...
T Consensus 224 g~~i~~~~~~~~~~~~~~~~~~~~~ 248 (282)
T PF03824_consen 224 GMAITVALFAGLAVLARLLAKRLSG 248 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455555666666666667765544
No 25
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=78.26 E-value=34 Score=37.33 Aligned_cols=163 Identities=16% Similarity=0.055 Sum_probs=88.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHH
Q 046783 267 SQKQVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVT 346 (830)
Q Consensus 267 ~~KRl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~a 346 (830)
.+|| ..--++..|+++...-++.++..||-...=|.+.|..+.++-+++..+- .++...+.|.| =+++-...|.++.
T Consensus 17 ~eq~-~L~~Si~~tvi~A~~GIi~GL~~gS~~IiFDGvYSl~da~mtllsL~vs-rli~~~p~~~R-F~~GfwhlEplvL 93 (314)
T COG3965 17 NEQL-YLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVS-RLIAKDPRDAR-FPYGFWHLEPLVL 93 (314)
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHHHhcceEEEeccHHHHHHHHHHHHHHHHH-HHhccCCCccc-cCcchhhhhhhHh
Confidence 3444 4444566677777777777777777777777788888888777754444 44554444555 3444343444433
Q ss_pred HHHHHHHHHhhcCchhhhhHHHHHhhheeeecccccccccccccCCCccchhhhhccchhhhhhhhhhhHHHHHHHH---
Q 046783 347 LVCTIVLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNYHELGFESSESFSSLIMKPIRHILSERKSRKIALFLL--- 423 (830)
Q Consensus 347 fl~alvL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~L~--- 423 (830)
.+ .|.++..+|.|-..++...+.++-.++.++.. +...+.
T Consensus 94 ~i---------------ng~ll~ll~lyAlinAl~~l~dGGR~v~~~~a----------------------i~yt~~s~~ 136 (314)
T COG3965 94 AI---------------NGTLLALLCLYALINALGSLLDGGREVEPGHA----------------------IAYTLVSVT 136 (314)
T ss_pred hh---------------ccHHHHHHHHHHHHHHHHHHhcCCccccccHH----------------------HHHHHHHHH
Confidence 33 34444455655555555554443333322211 111211
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHhc
Q 046783 424 INTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISR 469 (830)
Q Consensus 424 iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s~ 469 (830)
.+...+...-..--...|.-+-+|.--.++|..-+...++|...+.
T Consensus 137 ~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS~al~VaF~~a~ 182 (314)
T COG3965 137 GCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLSAALFVAFAAAW 182 (314)
T ss_pred HHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111122345577777788778888877777777765553
No 26
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=77.10 E-value=24 Score=38.45 Aligned_cols=123 Identities=18% Similarity=0.120 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCCCCccchhHHHHHHHhHHHHHHHhhccCCCCcCCCCCCCCCCCCcccchhhHHHHH
Q 046783 61 LQFLILILFSLRSLYSLLPFLRSSPSFSLFPFTFLVSLLSFLLSLAFSLFSFPSSKRLFNPKQHQNPLPIFPLNKSLLAK 140 (830)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (830)
+.++++-.+..-+-+...+++-+. ++...+.|+=.+.++++-+ ++-++.+.+. + ...++.++.-
T Consensus 14 ~~~~~la~~~~~~~~~~~K~~~~~--~~~~~~~~~R~~~a~l~l~---~~~~~~~~~~-------~----~~~~~~~~~~ 77 (293)
T PRK10532 14 ILLLLIAMASIQSGASLAKSLFPL--VGAPGVTALRLALGTLILI---AIFKPWRLRF-------A----KEQRLPLLFY 77 (293)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHH--cCHHHHHHHHHHHHHHHHH---HHHhHHhccC-------C----HHHHHHHHHH
Confidence 444444444555666666666442 3344455555555532222 2212111110 1 1223345466
Q ss_pred HHHHHHHHHHHHhhhcccchhHHHHhhhcCceeEEEEeeccCCCCccccCCccccchhHHHHHHHHHHh
Q 046783 141 SFLLACVFLLRFQALRYCGTAAMILAEISGNVAGRFVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLS 209 (830)
Q Consensus 141 ~~~~~~~~~l~~~gl~~cgp~r~ll~e~s~~v~~~~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~ 209 (830)
|++.++...++++|++.-++-.+.+..+..-+... ++ +++ +++|..++.+.++|++++.
T Consensus 78 g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~-ll-~~~--------~~~~~~~~~i~~~Gv~li~ 136 (293)
T PRK10532 78 GVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVA-LF-SSR--------RPVDFVWVVLAVLGLWFLL 136 (293)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HH-hcC--------ChHHHHHHHHHHHHHheee
Confidence 67778888899999887655554333333222222 22 222 4567778877788887654
No 27
>COG2215 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=74.82 E-value=1.5e+02 Score=33.17 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=22.8
Q ss_pred chhhhHHHHHHHHHHhHHHHHHHHHHHHHhcc
Q 046783 721 ADPACSIFISLLIVSSVIPLLRNSAEILLQRV 752 (830)
Q Consensus 721 ~DPi~SiiIsilIl~sa~pLlk~s~~iLLq~~ 752 (830)
+=.+.++-++.-|-.+++-++--+++.+..+-
T Consensus 236 il~VlamS~GtalTvs~lA~~av~ak~~a~~~ 267 (303)
T COG2215 236 ILSVLAMSIGTALTVSALALLAVTAKNTAVRL 267 (303)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666777777888888877777777554
No 28
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=72.33 E-value=1e+02 Score=35.15 Aligned_cols=136 Identities=16% Similarity=0.188 Sum_probs=80.7
Q ss_pred CChHHHHHHHHHHHHHHHHhhhhhhcCCCCccchhHHHHHHHhHHHHHHHhhccCCCCcCCCCCCCCCCCCcccchhhHH
Q 046783 58 KSSLQFLILILFSLRSLYSLLPFLRSSPSFSLFPFTFLVSLLSFLLSLAFSLFSFPSSKRLFNPKQHQNPLPIFPLNKSL 137 (830)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (830)
+-||.+.++.=+.--.++-+.+.+-..+ .+.++++|.-.++++++.+.|.+.++ ++.+ -|......+..+
T Consensus 12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~G-~~~~~~~~~R~~iA~l~Ll~~~~~~~---~~~~------~~~~~~~~~~~l 81 (358)
T PLN00411 12 AVFLTAMLATETSVVGISTLFKVATSKG-LNIYPFLGYSYLLASLLLLPSLFFTN---RSRS------LPPLSVSILSKI 81 (358)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHCC-CCccHHHHHHHHHHHHHHHHHHHHHH---Hhcc------cCcchHHHHHHH
Confidence 5567776665555555555555555444 77777888777777555555544432 1111 011112233456
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhHH-HHhhhcCceeEE--EEe------eccCCCCccccCCccccchhHHHHHHHHHH
Q 046783 138 LAKSFLLACVFLLRFQALRYCGTAAM-ILAEISGNVAGR--FVA------EGRKNGSFTDWSKFSKVGGFSCMFVGLFLL 208 (830)
Q Consensus 138 ~~~~~~~~~~~~l~~~gl~~cgp~r~-ll~e~s~~v~~~--~~~------~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll 208 (830)
+..|++.+++..+.+.|+++-.+-.+ ++.=-...+... .++ .+.+ -++.|.-|.++-++|+.++
T Consensus 82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er-------~~~~~~~G~~l~~~Gv~ll 154 (358)
T PLN00411 82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER-------SSVAKVMGTILSLIGALVV 154 (358)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccc-------ccHHHHHHHHHHHHHHHHH
Confidence 67788777788889999999888876 443333333322 223 2444 2567788888888888865
Q ss_pred hc
Q 046783 209 SV 210 (830)
Q Consensus 209 ~~ 210 (830)
..
T Consensus 155 ~~ 156 (358)
T PLN00411 155 IF 156 (358)
T ss_pred HH
Confidence 54
No 29
>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=67.14 E-value=3.3 Score=47.07 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=79.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHHH
Q 046783 267 SQKQVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVVT 346 (830)
Q Consensus 267 ~~KRl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~a 346 (830)
+.|+++.++.++-+++.+.+=++.+-.+.+...++|+.+=..+...... +++++.......+++ -.|+-.|-|.+.+
T Consensus 5 ~gk~~rli~~l~ltiiFfvLEli~gyv~~sLaLiadSfHML~dIiaLiv--af~~ik~a~~~~~~k-~tyGw~rAEilGa 81 (404)
T KOG1483|consen 5 GGKSLRLISVLVLTIIFFVLELITGYVTNSLALIADSFHMLNDIIALIV--AFWAIKEAKRIPLQK-YTYGWARAEILGA 81 (404)
T ss_pred cccccceeehHHHHHHHHHhhhhhhcccchHHHHhhHHHHHHHHHHHHH--HHHHHHhhhcCcccc-cCcchhHHHHHhh
Confidence 3466688888888999999988888888888888885544555444444 777777777767777 7788899999999
Q ss_pred HHHHHHHHHhhcCchhhhhHHHHHhhheeeecccccccccc
Q 046783 347 LVCTIVLELFYYPELSLWGLLLCVLLLYFAVRELDPVYSNY 387 (830)
Q Consensus 347 fl~alvL~~~~~~~~slsG~Li~all~~i~~~~~~~i~~~l 387 (830)
|+-++++- ++|+-|..|..+|+.++.
T Consensus 82 lvN~ifl~---------------alc~~I~~EA~~R~I~p~ 107 (404)
T KOG1483|consen 82 LVNAIFLT---------------ALCVSILIEAIERIIEPH 107 (404)
T ss_pred hhHHHHHH---------------HHHHHHHHHHHHhhcCCc
Confidence 98888887 778888888888876643
No 30
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=65.23 E-value=43 Score=30.54 Aligned_cols=64 Identities=8% Similarity=0.099 Sum_probs=46.2
Q ss_pred HHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCC-----HHHHHHHHHHHHhc-CCCCeEEEEEE
Q 046783 762 ETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEAD-----MVSIKAQVSHMLSD-AGIKDLTLQVE 827 (830)
Q Consensus 762 ~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~-----~~~I~~~V~~il~~-~gI~~vTIQiE 827 (830)
++.+.+.++||+.+-..+.+.+-++.+- .++.|++.++.. .+++++++++.+++ .|+ .+.|++-
T Consensus 8 ~Ie~vl~~~~~~~~~y~i~v~~~~~~D~-l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv-~~~V~lv 77 (96)
T PF14535_consen 8 QIEEVLREFPEVSPEYQIVVTREGGLDE-LTVRVELRPGFSDDAEDLEALAERIAERLKERLGV-RPEVELV 77 (96)
T ss_dssp HHHHHHCTSTTEEEEEEEEEEEETTEEE-EEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS--EEEEEE
T ss_pred HHHHHHHhCcCCCCcEEEEEEcCCCCcE-EEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc-eEEEEEE
Confidence 4445567889998778888888665444 589999998763 46888899999985 487 3455543
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=64.12 E-value=5.5 Score=36.34 Aligned_cols=69 Identities=23% Similarity=0.370 Sum_probs=51.7
Q ss_pred hhHHHHHHHH-HHHHHHHHHhhhcccchhHHHHhhhcCceeEE---EEeeccCCCCccccCCccccchhHHHHHHHHHHh
Q 046783 134 NKSLLAKSFL-LACVFLLRFQALRYCGTAAMILAEISGNVAGR---FVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLS 209 (830)
Q Consensus 134 ~~~~~~~~~~-~~~~~~l~~~gl~~cgp~r~ll~e~s~~v~~~---~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~ 209 (830)
+..++..+++ .++..++|++|++.-++.+.-...+...+... .++.+++. ++.|.-|..+.++|.++++
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~-------~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 53 WLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERP-------SWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCC-------CHHHHHHHHHHHHHHHHHH
Confidence 3355567777 69999999999999999998777777766666 23556652 4578888888888887653
No 32
>PF03780 Asp23: Asp23 family; InterPro: IPR005531 This entry represents the alkaline shock protein 23 family. These small proteins are involved in alkaline pH tolerance of Staphylococcus aureus [,].
Probab=63.94 E-value=45 Score=30.65 Aligned_cols=52 Identities=13% Similarity=0.236 Sum_probs=33.4
Q ss_pred EEEEEEcCCeEEEEEEEEECCCCCHHHHHHH----HHHHHhcC---CCCeEEEEEEecC
Q 046783 779 LHLWSFTSTDVVGTLNLHVSSEADMVSIKAQ----VSHMLSDA---GIKDLTLQVECVR 830 (830)
Q Consensus 779 lhiW~l~~~~~V~svHV~V~~~~~~~~I~~~----V~~il~~~---gI~~vTIQiE~~~ 830 (830)
+++..-.++.+..++++.+..+.+..++.++ |++.++++ .+.++.|.++-++
T Consensus 50 v~v~~~~~~~i~v~l~v~v~~g~~i~~v~~~iq~~V~~~v~~~tg~~v~~V~V~V~~v~ 108 (108)
T PF03780_consen 50 VKVEVDEDGGITVDLHVVVEYGVNIPEVAEEIQEKVKEAVEEMTGIEVSEVNVHVEDVR 108 (108)
T ss_pred eEEEEccCcceEEEEEEEEECCccHHHHHHHHHHHHHHHHHHHHCCeeEEEEEEEEecC
Confidence 3444321566777999999999886655554 44444443 4677788777653
No 33
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=62.87 E-value=29 Score=37.82 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCccchhHHHHHHHhHHHHHHHhhccCCCCcCCCCCCCCCCCCcccchhhHHHHHHHH
Q 046783 64 LILILFSLRSLYSLLPFLRSSPSFSLFPFTFLVSLLSFLLSLAFSLFSFPSSKRLFNPKQHQNPLPIFPLNKSLLAKSFL 143 (830)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (830)
.+..+-+.-|+|+=..|..+. |+.+...=...+==+...+++..+.+||..|.. -++++.++.-|+-
T Consensus 14 ~~~ll~amvsiq~Gas~Ak~L--FP~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~-----------~~~~~~~~~yGvs 80 (292)
T COG5006 14 ILALLVAMVSIQSGASFAKSL--FPLVGAAGVTALRLAIAALILLALFRPWRRRLS-----------KPQRLALLAYGVS 80 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHH--ccccChhhHHHHHHHHHHHHHHHHhhHHHhccC-----------hhhhHHHHHHHHH
Confidence 455566778888877777663 455544433444334446777788899997763 3466778899999
Q ss_pred HHHHHHHHHhhhcccchhHH-HHhhhcCceeEEEEeeccCCCCccccCCccccchhHHHHHHHHHHhccC-ccccccCCc
Q 046783 144 LACVFLLRFQALRYCGTAAM-ILAEISGNVAGRFVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLSVSW-DRTECFPLS 221 (830)
Q Consensus 144 ~~~~~~l~~~gl~~cgp~r~-ll~e~s~~v~~~~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~~~~-~~~~~~~~~ 221 (830)
++.-.++...+++-- |+.+ +-.|..|-.+..++. .|+ .+...=+.+.++|..||.-+. +....+|.
T Consensus 81 Lg~MNl~FY~si~ri-PlGiAVAiEF~GPL~vA~~~-sRr---------~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~- 148 (292)
T COG5006 81 LGGMNLLFYLSIERI-PLGIAVAIEFTGPLAVALLS-SRR---------LRDFVWVALAVLGIWLLLPLGQSVWSLDPV- 148 (292)
T ss_pred HHHHHHHHHHHHHhc-cchhhhhhhhccHHHHHHHh-ccc---------hhhHHHHHHHHHHHHhheeccCCcCcCCHH-
Confidence 999999998888765 6665 777888876655332 221 122223556666776555543 33333332
Q ss_pred ccccccccccCcceeeechhhhhhhhhhhhhhhhhh-hcccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 046783 222 SSFLGKWSLYGEHCVRLWPMLLPFLSGFLGCYERVS-MNWGAIRQLSQKQVRLISLFYTTVLLSVPALVS 290 (830)
Q Consensus 222 ~~~~~~~~~k~~~~l~~~~l~~p~~~g~~s~~r~~~-~~~~~~~~~~~KRl~Al~~~~a~~~L~p~al~~ 290 (830)
|+.+-...=. |-++|-=.-+|.. .+=| .+=.|+..++++++.+|+...+
T Consensus 149 -----------Gv~~Al~AG~--~Wa~YIv~G~r~g~~~~g-------~~g~a~gm~vAaviv~Pig~~~ 198 (292)
T COG5006 149 -----------GVALALGAGA--CWALYIVLGQRAGRAEHG-------TAGVAVGMLVAALIVLPIGAAQ 198 (292)
T ss_pred -----------HHHHHHHHhH--HHHHHHHHcchhcccCCC-------chHHHHHHHHHHHHHhhhhhhh
Confidence 1111111111 2233333334443 2212 2447999999999999998854
No 34
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=57.97 E-value=1.1e+02 Score=34.28 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHH-HHHHHHHHHHHHHHHHH
Q 046783 449 CHMLFDCAALAIGLYASYISRLPANSQFNYGRGRF-EVLSGYTNAVFLVLVGA 500 (830)
Q Consensus 449 lHsl~D~~s~~l~L~al~~s~~p~d~~~~yG~~R~-E~Laalv~ai~Ll~i~~ 500 (830)
+...+|.+...+++++...+--=.-..+||||.-+ |.++.++.|.+.+..+.
T Consensus 115 ~~~~s~~~~l~lG~l~~~~g~~YTgGp~PlgY~gLGEi~~~vffG~l~v~g~~ 167 (303)
T COG1575 115 LAALSDWLVLLLGLLCIAAGILYTGGPFPLGYMGLGEIFVGVFFGPLIVLGAY 167 (303)
T ss_pred HHHHhhhHHHHHHHHHHHheeeeccCCcCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 45566777667777776555433334578887755 55555555555554444
No 35
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=52.92 E-value=3.3e+02 Score=30.72 Aligned_cols=128 Identities=9% Similarity=0.062 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccchhHHHHhh-hcCceeEE--EEeeccCCCCccccCCccccchhHHHHHHHHHHhc
Q 046783 134 NKSLLAKSFLLACVFLLRFQALRYCGTAAMILAE-ISGNVAGR--FVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLSV 210 (830)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~gl~~cgp~r~ll~e-~s~~v~~~--~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~~ 210 (830)
++.++.-|+........-+.|+.+-..--+-+.- -+..+.+. .++.+.+- ++++.-+++..++|+.+.+.
T Consensus 114 ~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~-------s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFL-------NLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCc-------cHHHHHHHHHHHHHHHheec
Confidence 3455566666554444444555432222121111 22221111 23556652 55788888888999887663
Q ss_pred cCccccccCCcccccccccccCcceeeechhhhhhhhhhhhhhhhhhhcccccc------cchhhHHHHHHHHHHHHHHH
Q 046783 211 SWDRTECFPLSSSFLGKWSLYGEHCVRLWPMLLPFLSGFLGCYERVSMNWGAIR------QLSQKQVRLISLFYTTVLLS 284 (830)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~l~~p~~~g~~s~~r~~~~~~~~~~------~~~~KRl~Al~~~~a~~~L~ 284 (830)
+ +.. ++ + -|..+. +.+.+-.++|.+-++....+ +...--+....+++++++++
T Consensus 187 ~--~~~---~~------~---~G~~~~-------l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 245 (350)
T PTZ00343 187 K--ELH---FT------W---LAFWCA-------MLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISL 245 (350)
T ss_pred c--cch---hH------H---HHHHHH-------HHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHH
Confidence 2 111 10 0 012222 44455555555554332111 11111245566889999999
Q ss_pred HHHHH
Q 046783 285 VPALV 289 (830)
Q Consensus 285 p~al~ 289 (830)
|++++
T Consensus 246 p~~~~ 250 (350)
T PTZ00343 246 PLVLF 250 (350)
T ss_pred HHHHH
Confidence 98874
No 36
>PRK11118 putative monooxygenase; Provisional
Probab=52.33 E-value=46 Score=31.15 Aligned_cols=68 Identities=13% Similarity=0.194 Sum_probs=48.9
Q ss_pred chhhHHHHHHHHHcccCcceeeEEEEEEEcCCe-EEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEEEe
Q 046783 756 HELDLKETLNDVMKISGVHGIQNLHLWSFTSTD-VVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQVEC 828 (830)
Q Consensus 756 ~e~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~-~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQiE~ 828 (830)
.....+...+.|.+.||.+ .++|..+++. ..+-+- .++.+.+.+.-.+.-..+|+++||.++.+++--
T Consensus 19 m~~~~~~LA~sI~~EpGli----WKIWTen~~t~eaGGiY-lF~~e~~a~aYl~mH~aRL~~~Gv~~v~~kiFd 87 (100)
T PRK11118 19 MAKALKPLAESINEEPGFI----WKIWTENEKTQEAGGIY-LFEDEASAEAYLEMHTARLKNFGVEEVRAKIFD 87 (100)
T ss_pred HHHHHHHHHHHHhcCCCce----EEEeecCCCCcccceEE-EECCHHHHHHHHHHHHHHHHhcCCCeeEEEEEe
Confidence 3456667777888899985 5999987664 333333 345556677777777889999999999988743
No 37
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=50.50 E-value=75 Score=32.04 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHHhcC--CCCeEEEEE
Q 046783 758 LDLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVSHMLSDA--GIKDLTLQV 826 (830)
Q Consensus 758 ~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il~~~--gI~~vTIQi 826 (830)
..-+++.+.+.+++||.+ ..+--.+. ..++-+.+. .......+|+++|++.+++. +|++|.|--
T Consensus 75 ~~a~~i~~~v~~~~~V~~---A~vvv~~~-~a~Vav~~~-~~~~~~~~i~~~V~~~v~~~~p~~~~V~Vs~ 140 (177)
T PF09580_consen 75 QLADRIANRVKKVPGVED---ATVVVTDD-NAYVAVDLD-FNRFNTKKIKKKVEKAVKSADPRIYNVYVST 140 (177)
T ss_pred HHHHHHHHHHhcCCCceE---EEEEEECC-EEEEEEEec-ccccchhHHHHHHHHHHHHhCCCccEEEEEc
Confidence 445667777888888855 45555444 444355555 23556789999999999873 678887743
No 38
>PRK10019 nickel/cobalt efflux protein RcnA; Provisional
Probab=49.07 E-value=4.1e+02 Score=29.45 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=5.1
Q ss_pred HHHHHHHhHHHHH
Q 046783 729 ISLLIVSSVIPLL 741 (830)
Q Consensus 729 IsilIl~sa~pLl 741 (830)
++..+..+++.++
T Consensus 220 lGtaltm~~vgll 232 (279)
T PRK10019 220 IGLALTLVTVGVG 232 (279)
T ss_pred HHHHHHHHHHHHH
Confidence 3333334444433
No 39
>PF13740 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A.
Probab=48.15 E-value=1.2e+02 Score=26.29 Aligned_cols=61 Identities=8% Similarity=0.245 Sum_probs=41.7
Q ss_pred HHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEE
Q 046783 760 LKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQ 825 (830)
Q Consensus 760 l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQ 825 (830)
+.++-+.+.+ .|+ ++.|.+...+++ ...+.+.+.++++ +..++++.+++..++.|. ++.+|
T Consensus 16 v~~v~~~l~~-~g~-ni~d~~~~~~~~-~f~~~~~v~~~~~-~~~~l~~~L~~l~~~~~l-~v~v~ 76 (76)
T PF13740_consen 16 VAAVTGVLAE-HGC-NIEDSRQAVLGG-RFTLIMLVSIPED-SLERLESALEELAEELGL-DVSVQ 76 (76)
T ss_dssp HHHHHHHHHC-TT--EEEEEEEEEETT-EEEEEEEEEESHH-HHHHHHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHH-CCC-cEEEEEEEEEcC-eEEEEEEEEeCcc-cHHHHHHHHHHHHHHCCc-EEEEC
Confidence 4444444443 465 899999999885 5777899999854 667788888888888876 34443
No 40
>PF03806 ABG_transport: AbgT putative transporter family; InterPro: IPR004697 The p-aminobenzoyl-glutamate transporter family includes two putative transporters, the AbgT protein of Escherichia coli and MtrF of Neisseria gonorrhoeae. AbgT expression is apparently cryptic in wild type cells, but when present on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs []. p-Aminobenzoate is a constituent of, and a precursor for, the biosynthesis of folic acid. It is not currently known if AbgT is naturally involved in transporting p-aminobenzoyl-glutamate, or if it only becomes involved when under altered regulation. MtrF is an inner membrane protein which, together with the MtrCDE efflux pump, is required for high-level resistance to hydrophobic antimicrobial agents in N. gonorrhoeae []. Its role in this process is not known, but it has been suggested that it may be a component of the efflux pump which is dispensible for basal activity, but required for high-level activity [].
Probab=44.27 E-value=6.4e+02 Score=30.32 Aligned_cols=46 Identities=13% Similarity=0.078 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHH
Q 046783 421 FLLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASY 466 (830)
Q Consensus 421 ~L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~ 466 (830)
..++.+.+.+..+.+|+.+|..-=..|-.+++.+.+.....++-+.
T Consensus 300 IpiI~l~F~i~GivYG~~sG~iks~~Dv~~~M~~~m~~m~~yiVL~ 345 (502)
T PF03806_consen 300 IPIIFLFFLIPGIVYGIASGTIKSDKDVVKMMSKGMKSMAPYIVLA 345 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhceecCHHHHHHHHHHHHHHhHHHHHHH
Confidence 4556788899999999999999989999999988887776666554
No 41
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. This CD includes the second of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. The glycine cleavage enzyme system in Escherichia coli provides one-carbon units for cellular methylation reactions. This enzyme system, encoded by the gcvTHP operon and lpd gene, catalyzes the cleavage of glycine into CO2 + NH3 and transfers a one-carbon unit to tetrahydrofolate, producing 5,10-methylenetetrahydrofolate. The gcvTHP operon is activated by the GcvA protein in response to glycine and repressed by a GcvA/GcvR interaction in the absence of glycine. It has been proposed that the co-activator glycine acts through a mechanism of de-repression by binding to GcvR and preventing GcvR from interacting with GcvA to block GcvA's activator function. Evidence also suggests that GcvR in
Probab=43.06 E-value=1.7e+02 Score=25.08 Aligned_cols=55 Identities=13% Similarity=0.341 Sum_probs=40.2
Q ss_pred cccCcceeeEEEEEEEcC-----CeEEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEE
Q 046783 769 KISGVHGIQNLHLWSFTS-----TDVVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQ 825 (830)
Q Consensus 769 ~i~GV~~V~dlhiW~l~~-----~~~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQ 825 (830)
.-.|+ ++.++....... +...+.+.+.++.+.+..++.++++++.+++|+ ++.+|
T Consensus 21 ~~~~~-nI~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~l~~~l~~l~~~~~~-~~~~~ 80 (81)
T cd04869 21 AQRNI-NIEDLSTETYSAPMSGTPLFKAQATLALPAGTDLDALREELEELCDDLNV-DISLE 80 (81)
T ss_pred HHcCC-CeEEeEeeeecCCCCCcceEEEEEEEecCCCCCHHHHHHHHHHHHHHhcc-eEEec
Confidence 33566 788888776542 456667788887766888999999998888886 45555
No 42
>PLN02601 beta-carotene hydroxylase
Probab=42.87 E-value=3.1e+02 Score=30.29 Aligned_cols=75 Identities=13% Similarity=0.211 Sum_probs=37.4
Q ss_pred HHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhHH---HHHHHHHHHHHHHHHHHHh
Q 046783 464 ASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLVGALIVLESFERILDPQEISTNSL---LTVSIGGLLVNVIGLIFFH 540 (830)
Q Consensus 464 al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~p~~i~~~~l---l~Vsi~gLivNlv~~~~~~ 540 (830)
+-+.++|+ .++++| .+++...++-+..+++.-.+--+..-+++.++....+ +.+.+++.+.--+.+++.+
T Consensus 83 ~~~~~~k~-~er~ty------~~aa~~ss~gi~s~a~~a~y~rf~~~~~~g~~p~~em~~~~al~lgtfvgMEf~Aw~aH 155 (303)
T PLN02601 83 LKKAEKKK-SERFTY------LIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSMLEMFGTFALSVGAAVGMEFWARWAH 155 (303)
T ss_pred HHHHHHhh-hhhhHH------HHHHHHHhhcHHHHHHHHHHHHHhhccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556544 345555 2344444444444444444443444445555544333 2344455566666677777
Q ss_pred hcccc
Q 046783 541 EEHHH 545 (830)
Q Consensus 541 ~~h~H 545 (830)
++--|
T Consensus 156 KYvMH 160 (303)
T PLN02601 156 RALWH 160 (303)
T ss_pred HHHHH
Confidence 65433
No 43
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). The ACT_PSP_1 CD includes the first of the two ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). PSPs belong to the L-2-haloacid dehalogenase-like protein superfamily. PSP is involved in serine metabolism; serine is synthesized from phosphoglycerate through sequential reactions catalyzed by 3-phosphoglycerate dehydrogenase (SerA), 3-phosphoserine aminotransferase (SerC), and SerB. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=41.43 E-value=1.7e+02 Score=25.15 Aligned_cols=54 Identities=11% Similarity=0.175 Sum_probs=40.1
Q ss_pred cccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEE
Q 046783 769 KISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQ 825 (830)
Q Consensus 769 ~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQ 825 (830)
.-.|+ ++.|++.-.++ +.+.+.+-+.++++.+..++.+.+++..++.|+ ++.++
T Consensus 21 a~~~~-nI~dl~~~~~~-~~f~~~~~v~~p~~~~~~~l~~~l~~l~~~l~l-~i~~~ 74 (75)
T cd04870 21 AAHGV-RILDVGQAVIH-GRLSLGILVQIPDSADSEALLKDLLFKAHELGL-QVRFE 74 (75)
T ss_pred HHCCC-CEEecccEEEc-CeeEEEEEEEcCCCCCHHHHHHHHHHHHHHcCc-eEEEe
Confidence 33465 78888766665 557778888888777888999999999998876 44443
No 44
>PRK10614 multidrug efflux system subunit MdtC; Provisional
Probab=40.85 E-value=69 Score=41.58 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=51.2
Q ss_pred CccchhhhHHHHHHHHHHhHHHHHHHHHHHHH---------------hcccccchhhH-HHHHHHHHcccCcceeeEEEE
Q 046783 718 WLVADPACSIFISLLIVSSVIPLLRNSAEILL---------------QRVSRAHELDL-KETLNDVMKISGVHGIQNLHL 781 (830)
Q Consensus 718 w~~~DPi~SiiIsilIl~sa~pLlk~s~~iLL---------------q~~P~~~e~~l-~~i~~~i~~i~GV~~V~dlhi 781 (830)
|.+=-|+..+++.++++..++-.+..--..++ +.+|++.|+.+ +.+.+.+.+++||..+. .
T Consensus 6 ~~i~~~~~~~~l~~~l~~~G~~~~~~lp~~~~P~~~~p~v~V~~~~pGas~~~ve~~vt~piE~~l~~i~gv~~i~---S 82 (1025)
T PRK10614 6 LFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMT---S 82 (1025)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHhcCCHhhCCCCCCceEEEEEEcCCCCHHHHHHHHHHHHHHHhcCCCCceEEE---E
Confidence 33445666666666666666665555444444 44555455544 45555666777775554 3
Q ss_pred EEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHH
Q 046783 782 WSFTSTDVVGTLNLHVSSEADMVSIKAQVSHML 814 (830)
Q Consensus 782 W~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il 814 (830)
.. .++. +.+.++++.+.|.+...+++++++
T Consensus 83 ~s-~~G~--s~i~l~f~~~~d~~~a~~~v~~~v 112 (1025)
T PRK10614 83 SS-SLGS--TRIILQFDFDRDINGAARDVQAAI 112 (1025)
T ss_pred Ee-cCCe--EEEEEEEECCCChHHHHHHHHHHH
Confidence 33 3343 357777777777554444444444
No 45
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=40.19 E-value=5.2e+02 Score=28.10 Aligned_cols=65 Identities=11% Similarity=0.061 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhHHHHhhhcCceeEE---EEeeccCCCCccccCCccccchhHHHHHHHHHHh
Q 046783 138 LAKSFLLACVFLLRFQALRYCGTAAMILAEISGNVAGR---FVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLS 209 (830)
Q Consensus 138 ~~~~~~~~~~~~l~~~gl~~cgp~r~ll~e~s~~v~~~---~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~ 209 (830)
+.-++..++..++++.|++.-+...+.+..++--+... .++.+.+- ++++.-|+++-++|+++++
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~-------~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF-------RRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC-------cHHHHHHHHHHHHHHHHHH
Confidence 35567788899999999999887776555555444333 23445552 5577788888888888655
No 46
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=39.67 E-value=3.8e+02 Score=29.36 Aligned_cols=139 Identities=16% Similarity=0.120 Sum_probs=78.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccchhHHHHhhhcCceeEE---EEeeccCCCCccccCCccccchhHHHHHHHHHHhc
Q 046783 134 NKSLLAKSFLLACVFLLRFQALRYCGTAAMILAEISGNVAGR---FVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLSV 210 (830)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~gl~~cgp~r~ll~e~s~~v~~~---~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~~ 210 (830)
++..+..++..++...+-..+|++..-.--+++-.+..+... .++.|++- .+.|.-+++++.+|+++...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y-------~~~~~~~v~li~~Gv~~~~~ 136 (303)
T PF08449_consen 64 LKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRY-------SRRQYLSVLLITIGVAIFTL 136 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccc-------cHHHHHHHHHHHhhHheeee
Confidence 334558899999999999999999776554777665444332 34667762 44788899999999985555
Q ss_pred cCccccccCCcccccccccccCcceeeechhhhhhhhhhhhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 046783 211 SWDRTECFPLSSSFLGKWSLYGEHCVRLWPMLLPFLSGFLGCYERVSMNWGAIRQLSQKQVRLISLFYTTVLLSVPALV 289 (830)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~l~~p~~~g~~s~~r~~~~~~~~~~~~~~KRl~Al~~~~a~~~L~p~al~ 289 (830)
+.+......-. ...++ .-|.++++..++ ..|+.+.+++-..+.- +.....+--.+.+++.+++++..+.
T Consensus 137 ~~~~~~~~~~~--~~~~~--~~G~~ll~~sl~---~~a~~~~~qe~~~~~~---~~~~~~~mfy~n~~~~~~~~~~~~~ 205 (303)
T PF08449_consen 137 SDSSSSSSSNS--SSFSS--ALGIILLLLSLL---LDAFTGVYQEKLFKKY---GKSPWELMFYTNLFSLPFLLILLFL 205 (303)
T ss_pred ccccccccccc--ccccc--hhHHHHHHHHHH---HHHHHHHHHHHHHHHh---CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 43211111110 00011 115666655554 4566666554443211 1122333444555555555554444
No 47
>PF07260 ANKH: Progressive ankylosis protein (ANKH); InterPro: IPR009887 This family consists of several progressive ankylosis protein (ANK or ANKH) sequences. The ANK protein spans the outer cell membrane and shuttles inorganic pyrophosphate (PPi), a major inhibitor of physiologic and pathologic calcification, bone mineralisation and bone resorption []. Mutations in ANK are thought to give rise to Craniometaphyseal dysplasia (CMD) which is a rare skeletal disorder characterised by progressive thickening and increased mineral density of craniofacial bones and abnormally developed metaphyses in long bones [].; GO: 0015114 phosphate ion transmembrane transporter activity, 0035435 phosphate ion transmembrane transport, 0016021 integral to membrane
Probab=39.37 E-value=33 Score=38.56 Aligned_cols=97 Identities=19% Similarity=0.126 Sum_probs=62.0
Q ss_pred HHHHHHHHHhhhcccchhHHHHhhhcCceeEEEEeeccCCCCccccCCccccchhHHHHHHHH-----HHhccCcccccc
Q 046783 144 LACVFLLRFQALRYCGTAAMILAEISGNVAGRFVAEGRKNGSFTDWSKFSKVGGFSCMFVGLF-----LLSVSWDRTECF 218 (830)
Q Consensus 144 ~~~~~~l~~~gl~~cgp~r~ll~e~s~~v~~~~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~-----ll~~~~~~~~~~ 218 (830)
+|-+-+=|.-.+-+|||.- -+|+.+.+++. +++++++++.+++++-. .+++.|...-.-
T Consensus 49 LAsfglA~sL~lf~~sp~~--~~~~igl~~V~--------------s~rsrr~~vl~~~vag~v~avi~~LIa~TpLG~~ 112 (345)
T PF07260_consen 49 LASFGLAYSLMLFFASPLS--MFHHIGLVFVN--------------SKRSRRKAVLCMAVAGAVAAVIHLLIAWTPLGNY 112 (345)
T ss_pred HHHHHHHHHHHHHHhChhh--hhHHHHHHHhc--------------chhhhHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 5666666777777899986 47888887766 24468888887766543 367787444333
Q ss_pred CCcccccccc--cccCcceeeechhhhhhhhhhhhhhhhhh
Q 046783 219 PLSSSFLGKW--SLYGEHCVRLWPMLLPFLSGFLGCYERVS 257 (830)
Q Consensus 219 ~~~~~~~~~~--~~k~~~~l~~~~l~~p~~~g~~s~~r~~~ 257 (830)
-+...+.-++ +.++...++++.++ |+..|.....|=+-
T Consensus 113 li~~lhgVs~~va~~tr~a~l~L~ll-Pfl~alr~~~qGIL 152 (345)
T PF07260_consen 113 LINDLHGVSPSVAEKTRRAFLYLTLL-PFLDALRWIHQGIL 152 (345)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhHh
Confidence 3322222233 34666777766665 99988887777444
No 48
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=37.79 E-value=66 Score=35.05 Aligned_cols=129 Identities=13% Similarity=0.070 Sum_probs=70.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccchhHH-HHhhhcCceeEE--EEeeccCCCCccccCCccccchhHHHHHHHHHHh
Q 046783 133 LNKSLLAKSFLLACVFLLRFQALRYCGTAAM-ILAEISGNVAGR--FVAEGRKNGSFTDWSKFSKVGGFSCMFVGLFLLS 209 (830)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~gl~~cgp~r~-ll~e~s~~v~~~--~~~~g~~~~~~~~~~~~sk~rg~~~~~~~~~ll~ 209 (830)
.++.++.-|++.++...++..|+++=..--. ++.=.+...... .++.+++- ++++.-|+++.++|+.+..
T Consensus 64 ~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~-------~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 64 LLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEF-------PSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCC-------cHHHHHHHHHHHHHHhhhc
Confidence 5667778899999999999999987665554 333233322222 23445542 4567778888888887543
Q ss_pred ccCccccccCCcccccccccccCcceeeechhhhhhhhhhhhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHHHH
Q 046783 210 VSWDRTECFPLSSSFLGKWSLYGEHCVRLWPMLLPFLSGFLGCYERVSMNWGAI-RQLSQKQVRLISLFYTTVLLSVPAL 288 (830)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~l~~p~~~g~~s~~r~~~~~~~~~-~~~~~KRl~Al~~~~a~~~L~p~al 288 (830)
. ++. .++ + . |..+ + +.+++-.+.+.+-.++... ++...-++.....+.+++++.|++.
T Consensus 137 ~--~~~---~~~------~--~-G~~~-----~--l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~ 195 (302)
T TIGR00817 137 D--TEL---SFN------W--A-GFLS-----A--MISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAF 195 (302)
T ss_pred C--Ccc---ccc------H--H-HHHH-----H--HHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 1 111 110 0 0 1111 2 3344444444444332210 0112234566777788888888765
Q ss_pred H
Q 046783 289 V 289 (830)
Q Consensus 289 ~ 289 (830)
+
T Consensus 196 ~ 196 (302)
T TIGR00817 196 I 196 (302)
T ss_pred H
Confidence 4
No 49
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functionally related proteins defined by a conserved hydrophobic core of ten transmembrane domains []. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others. It is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals []. The yeast proteins Smf1 and Smf2 may also transport divalent cations []. The natural resistance of mice to infection with intracellular parasites is controlled by the Bcg locus, which modulates the cytostatic/cytocidal activity of phagocytes. Nramp1, the gene responsible, is expressed exclusively in macrophages and poly-morphonuclear leukocytes, and encodes a polypeptide (natural resistance-associated macrophage protein) with features typical of integral membrane proteins. Other transporter proteins from a variety of sources also belong to this family.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane
Probab=36.68 E-value=6.6e+02 Score=28.23 Aligned_cols=60 Identities=23% Similarity=0.153 Sum_probs=35.1
Q ss_pred CchhHHHHHHHHHHHHH-HHHHHHHH-----HHHHHHhhcCCCccc-hhHHHHHHHHHHHHHHHHHH
Q 046783 478 YGRGRFEVLSGYTNAVF-LVLVGALI-----VLESFERILDPQEIS-TNSLLTVSIGGLLVNVIGLI 537 (830)
Q Consensus 478 yG~~R~E~Laalv~ai~-Ll~i~~~I-----l~EsI~rLi~p~~i~-~~~ll~Vsi~gLivNlv~~~ 537 (830)
.+|+++|.+...+.+++ +.++...+ ..|..+.++.|.-.. ....++++.+|..+.-..++
T Consensus 111 ~~y~~~E~~~~~lv~~m~l~f~~~~~~~~p~~~~~~~g~~~P~~p~~~~~~~~valiGttv~p~~lf 177 (358)
T PF01566_consen 111 GGYRRLERILKVLVAVMVLAFLIAAFIVHPDWGEVARGLVVPSIPGPGSLLFAVALIGTTVMPHNLF 177 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhccCCCCcchhHHHHHHHHHHHhhhHHHHH
Confidence 35999999999888776 33333222 223444455444333 33456778888666555443
No 50
>KOG2802 consensus Membrane protein HUEL (cation efflux superfamily) [General function prediction only]
Probab=34.61 E-value=29 Score=39.42 Aligned_cols=83 Identities=16% Similarity=0.067 Sum_probs=63.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccccccccchhhHHHH
Q 046783 266 LSQKQVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQKFVISADFQREFVV 345 (830)
Q Consensus 266 ~~~KRl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~l~~~~~~~~~~~~ 345 (830)
+|..|..|. .+..+.+-+-+|...++.+||...-+|.++|..+..--++ ..+|+.-...-+|.. |||+.++.-|+.
T Consensus 203 k~s~rvVat-Ai~iN~l~~~~Kfg~w~~tgShsmfAEaIHS~aD~~NQ~l--La~Gis~S~q~PD~l-hPYGYsnmRyVs 278 (503)
T KOG2802|consen 203 KGSGRVVAT-AICINGLNCFFKFGAWIYTGSHSMFAEAIHSLADTCNQLL--LALGISKSVQTPDPL-HPYGYSNMRYVS 278 (503)
T ss_pred cCCCceehh-HHHHHHHHHHHHhhHhhhcccHHHHHHHHHHHHHHHHHHH--HHhhhhhcccCCCCC-CCCcccchhHHH
Confidence 566675543 4455667778899999999999888899999999877777 778877776666666 999999888888
Q ss_pred HHHHHHH
Q 046783 346 TLVCTIV 352 (830)
Q Consensus 346 afl~alv 352 (830)
.++++.-
T Consensus 279 SLISgvG 285 (503)
T KOG2802|consen 279 SLISGVG 285 (503)
T ss_pred HHHhccc
Confidence 7765543
No 51
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species.
Probab=31.24 E-value=8.7e+02 Score=28.01 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHhh
Q 046783 483 FEVLSGYTNAVFLVLVGALIVLESFERILDPQEISTNSLLTVSIGGLLVNVIGLIFFHE 541 (830)
Q Consensus 483 ~E~Laalv~ai~Ll~i~~~Il~EsI~rLi~p~~i~~~~ll~Vsi~gLivNlv~~~~~~~ 541 (830)
.+.++.++.-+|+..+|.. -.+..+++ .+.++..+++-+.++++..+.+.+
T Consensus 265 ~~~lg~~lly~ffa~IGa~---a~i~~l~~-----ap~~~l~~~i~l~iH~~l~l~~~k 315 (378)
T PF05684_consen 265 ASELGTFLLYLFFAVIGAS---ADISELLD-----APSLFLFGFIILAIHLLLMLILGK 315 (378)
T ss_pred hHHHHHHHHHHHHHHHccc---cCHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666665555555532 24444443 344556666677777776665543
No 52
>TIGR02945 SUF_assoc FeS assembly SUF system protein. Members of this family belong to the broader Pfam family pfam01883, or Domain of Unknown Function DUF59. Many members of DUF59 are candidate ring hydroxylating complex subunits. However, members of the narrower family defined here all are found in genomes that carry the FeS assembly SUF system. For 70 % of these species, the member of this protein family is found as part of the SUF locus, usually immediately downstream of the sufS gene.
Probab=30.90 E-value=3.3e+02 Score=24.68 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=27.9
Q ss_pred CeEEEEEEEEECCCCCHHHHHHHHHHHHhcC-CCCeEEEEEEe
Q 046783 787 TDVVGTLNLHVSSEADMVSIKAQVSHMLSDA-GIKDLTLQVEC 828 (830)
Q Consensus 787 ~~~V~svHV~V~~~~~~~~I~~~V~~il~~~-gI~~vTIQiE~ 828 (830)
+.+..++.+-.....-.+.+.+++++.+.+. |++.+.|+++.
T Consensus 37 ~~v~i~l~l~~p~~~~~~~l~~~i~~al~~l~gv~~v~v~i~~ 79 (99)
T TIGR02945 37 GHVDIQMTLTAPNCPVAGSMPGEVENAVRAVPGVGSVTVELVW 79 (99)
T ss_pred CeEEEEEEECCCCCChHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 4444344443333344667889999999884 99988888764
No 53
>PF08803 ydhR: Putative mono-oxygenase ydhR; InterPro: IPR014910 YdhR is a homodimeric protein that comprises of a central four-stranded beta sheet and four surrounding alpha helices []. It shows structural homology to the ActVA-Orf6 and YgiN proteins which indicates it could be a mono-oxygenase. ; PDB: 1WD6_B 2HIQ_B 2ASY_B.
Probab=30.16 E-value=1.4e+02 Score=27.98 Aligned_cols=67 Identities=13% Similarity=0.228 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHcccCcceeeEEEEEEEcCC-eEEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEEEec
Q 046783 758 LDLKETLNDVMKISGVHGIQNLHLWSFTST-DVVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQVECV 829 (830)
Q Consensus 758 ~~l~~i~~~i~~i~GV~~V~dlhiW~l~~~-~~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQiE~~ 829 (830)
...++..+.+.+.||.+ -++|.-++. .-.|-+-+- +.+.+++.-.+.=..+|+++|+.++++++--+
T Consensus 18 ~~~~~LA~sI~~ePGli----wKiWten~~t~eaGGiYLF-e~e~~A~aY~~~h~aRl~~~Gv~~i~~kiFdv 85 (97)
T PF08803_consen 18 KAFNDLAESINQEPGLI----WKIWTENEETGEAGGIYLF-EDEASAEAYLEMHTARLAAFGVTEIRGKIFDV 85 (97)
T ss_dssp HHHHHHHHHHTTSTTEE----EEEEEEETTTTEEEEEEEE-SSHHHHHHHHHHHHHHHGGGTSS--EEEEEEE
T ss_pred HHHHHHHHHHhhCCCeE----EEEEEecCCCCccceEEEE-CCHHHHHHHHHHHHHHHHhcCccceEEEEEec
Confidence 45556666788899986 488988665 355555543 44455666666667888999999999987543
No 54
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=29.77 E-value=2e+02 Score=24.01 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHcccCcceeeEEEEEEE-cCCeEEEEEEEEECCCCCHHHHHHHHHHHHhc-CCCCeEEEEE
Q 046783 758 LDLKETLNDVMKISGVHGIQNLHLWSF-TSTDVVGTLNLHVSSEADMVSIKAQVSHMLSD-AGIKDLTLQV 826 (830)
Q Consensus 758 ~~l~~i~~~i~~i~GV~~V~dlhiW~l-~~~~~V~svHV~V~~~~~~~~I~~~V~~il~~-~gI~~vTIQi 826 (830)
...+++.+.+.+.|+|..++ .. |+.++. +++.+. +..++.+-+.+.+++ .||.++...+
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~-----~vtG~~d~~--~~v~~~---d~~~l~~~i~~~l~~~~gV~~~~t~i 70 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECY-----SVTGEYDLI--LKVRAR---DMEELEEFIREKLRSIPGVRRTETSI 70 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEE-----EESSSSSEE--EEEEES---SHHHHHHHHHHTHHTSTTEEEEEEEE
T ss_pred chHHHHHHHHHcCCCEEEEE-----EEeCCCCEE--EEEEEC---CHHHHHHHHHHHhhcCCCEEEEEEEE
Confidence 35888999999999996554 44 444555 666664 445555556665654 4787766544
No 55
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=28.55 E-value=1.9e+02 Score=28.94 Aligned_cols=43 Identities=12% Similarity=0.171 Sum_probs=28.1
Q ss_pred CCeEEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEEEe
Q 046783 786 STDVVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQVEC 828 (830)
Q Consensus 786 ~~~~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQiE~ 828 (830)
++.+..++.+......-.+.|+++|++.|++.|+.++.|++..
T Consensus 24 gd~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~~Gv~~V~V~i~~ 66 (146)
T TIGR02159 24 GGGVVVKFTPTYSGCPALEVIRQDIRDAVRALGVEVVEVSTSL 66 (146)
T ss_pred CCEEEEEEEeCCCCCchHHHHHHHHHHHHHhcCCCeEEEeEee
Confidence 3444333333323323467899999999998899988888753
No 56
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=27.13 E-value=7.6e+02 Score=26.03 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCccchhH--HHHHHHHHHHHHHHHHHHHhh
Q 046783 495 LVLVGALIVLESFERILDPQEISTNS--LLTVSIGGLLVNVIGLIFFHE 541 (830)
Q Consensus 495 Ll~i~~~Il~EsI~rLi~p~~i~~~~--ll~Vsi~gLivNlv~~~~~~~ 541 (830)
+++.|+..+..++..++......... +++++++|-++-.++..++++
T Consensus 102 Ll~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr 150 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYR 150 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34567777888888888766544443 366777777777777777765
No 57
>PRK15385 magnesium transport protein MgtC; Provisional
Probab=26.87 E-value=7.3e+02 Score=26.71 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=31.3
Q ss_pred cccCcceeeEEEEEEEc-CCeEEEEEEEEECCCCCHHHHHHHHHHHH-hcCCCCeEEEEEE
Q 046783 769 KISGVHGIQNLHLWSFT-STDVVGTLNLHVSSEADMVSIKAQVSHML-SDAGIKDLTLQVE 827 (830)
Q Consensus 769 ~i~GV~~V~dlhiW~l~-~~~~V~svHV~V~~~~~~~~I~~~V~~il-~~~gI~~vTIQiE 827 (830)
+-.+. .+.++++-... +++...++++..... .++-.+++-..+ .+.||.++.=+++
T Consensus 166 ~~~~~-~~~~l~~~~~~~~~~~ei~a~l~~~~~--~~~~le~iv~~L~~~pgV~~v~W~~~ 223 (225)
T PRK15385 166 KEAAI-CLQGLGSVPAQEQGYKEIRAELVGHAD--YRKTRELIISRIGDNDNITAIHWSID 223 (225)
T ss_pred HhCCC-ceEEeEeeecCCCCeEEEEEEEEecCC--chhhHHHHHHHHhCCCCeEEEEEEec
Confidence 33444 67888887764 444544555555443 233334444444 4568888776654
No 58
>PRK11589 gcvR glycine cleavage system transcriptional repressor; Provisional
Probab=26.69 E-value=2.8e+02 Score=28.90 Aligned_cols=57 Identities=11% Similarity=0.141 Sum_probs=44.6
Q ss_pred cccCcceeeEEEEEEEcC-----CeEEEEEEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEEE
Q 046783 769 KISGVHGIQNLHLWSFTS-----TDVVGTLNLHVSSEADMVSIKAQVSHMLSDAGIKDLTLQVE 827 (830)
Q Consensus 769 ~i~GV~~V~dlhiW~l~~-----~~~V~svHV~V~~~~~~~~I~~~V~~il~~~gI~~vTIQiE 827 (830)
.-.|| ++.+++....+. ..+.+.+.+.++++.+...++++.+++..++++ +.++++.
T Consensus 117 a~~~i-NI~~L~T~~~~a~~~~~~lf~~~~~v~lP~~~~~~~L~~~l~~l~~eL~v-d~~l~~~ 178 (190)
T PRK11589 117 DSHHM-NIAELVSRTQPAEGERPAQLHIQITAHSPASQDAANIEQAFKALCTELNA-QGSINVV 178 (190)
T ss_pred HHcCC-ChhheEEeeecCCCCCcccEEEEEEEEcCCCCCHHHHHHHHHHHHHHhCc-eEEEEEe
Confidence 34666 888999887652 267778888888888899999999999999877 5666554
No 59
>TIGR00489 aEF-1_beta translation elongation factor aEF-1 beta. This model describes the archaeal translation elongation factor aEF-1 beta. The member from Sulfolobus solfataricus was demonstrated experimentally. It is a dimer that catalyzes the exchange of GDP for GTP on aEF-1 alpha.
Probab=26.39 E-value=3.7e+02 Score=24.67 Aligned_cols=73 Identities=10% Similarity=0.101 Sum_probs=49.0
Q ss_pred hcccccchhhHHHHHHHHHcc-cCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHHhcC-CCCeEEEE
Q 046783 750 QRVSRAHELDLKETLNDVMKI-SGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVSHMLSDA-GIKDLTLQ 825 (830)
Q Consensus 750 q~~P~~~e~~l~~i~~~i~~i-~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il~~~-gI~~vTIQ 825 (830)
.--|.+.+.|++++.+++.++ +.-..+.....-.++-|-...-+.+.+.++. --.+.+++.+++. |++++.|.
T Consensus 9 kV~P~s~evDle~L~~~ik~~~~~g~~~~~~~~ePiaFGLkaL~~~~vv~D~~---g~td~lee~i~~ve~V~svev~ 83 (88)
T TIGR00489 9 KVMPESPDVDLEALKEKIKERIPEGVEIRKIDEEPIAFGLVAINVMVVMGDAE---GGTEAAEESLSGIEGVESVEVT 83 (88)
T ss_pred EECCCCCccCHHHHHHHHHHhCcCCcEEeeeEEEeeeccceeeEEEEEEecCC---cChHHHHHHHhcCCCccEEEEE
Confidence 345777778899988888765 3333677888888888877777777776553 1225566666654 77766553
No 60
>PF01390 SEA: SEA domain; InterPro: IPR000082 SEA is an extracellular domain associated with O-glycosylation []. Proteins found to contain SEA-modules include, agrin, enterokinase, 63 kDa Strongylocentrotus purpuratus (Purple sea urchin) sperm protein, perlecan (heparan sulphate proteoglycan core, mucin 1 and the cell surface antigen, 114/A10, and two functionally uncharacterised, probably extracellular, Caenorhabditis elegans proteins. Despite the functional diversity of these adhesive proteins, a common denominator seems to be their existence in heavily glycosylated environments. In addition, the better characterised proteins all contain O-glycosidic-linked carbohydrates such as heparan sulphate that contribute considerably to their molecular masses. The common module might regulate or assist binding to neighbouring carbohydrate moieties. Enterokinase, the initiator of intestinal digestion, is a mosaic protease composed of a distinctive assortment of domains []. ; PDB: 2ACM_B 1IVZ_A 2E7V_A.
Probab=26.28 E-value=3.3e+02 Score=24.53 Aligned_cols=43 Identities=14% Similarity=0.263 Sum_probs=33.4
Q ss_pred ceeeEEEEEEEcCCeEEEEEEEEECCCC--CHHHHHHHHHHHHhc
Q 046783 774 HGIQNLHLWSFTSTDVVGTLNLHVSSEA--DMVSIKAQVSHMLSD 816 (830)
Q Consensus 774 ~~V~dlhiW~l~~~~~V~svHV~V~~~~--~~~~I~~~V~~il~~ 816 (830)
.++..++++.+.++.+++++.+.+.++. +...+.+.+++.+++
T Consensus 51 ~~~~~~~I~~f~~gsViv~~~~~f~~~~~~~~~~~~~~l~~~l~~ 95 (107)
T PF01390_consen 51 PGFVGVTITSFRPGSVIVDFDVIFDPPSSAPPADIEEALQNALQQ 95 (107)
T ss_dssp TTEEEEEEEEEEETEEEEEEEEEEETTT-S-HHHHHHHHHHHHCC
T ss_pred CCcceEEEEEEECCCEEEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 5678888999988999999999995554 356777778888776
No 61
>PF02790 COX2_TM: Cytochrome C oxidase subunit II, transmembrane domain This family corresponds to chains b and o.; InterPro: IPR011759 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The enzyme complex consists of 3-4 subunits (prokaryotes) to up to 13 polypeptides (mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A) (see IPR001505 from INTERPRO), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c. The N-terminal domain of cytochrome C oxidase contains two transmembrane alpha-helices. ; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0009055 electron carrier activity, 0022900 electron transport chain, 0016021 integral to membrane; PDB: 3VRJ_C 2EIN_B 3AG3_B 2DYR_O 3AG1_B 2EIK_O 3ASN_B 1OCR_B 2EIJ_B 1OCC_O ....
Probab=26.00 E-value=2.8e+02 Score=24.15 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=21.6
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 046783 471 PANSQFNYGRGRFEVLSGYTNAVFLVLVGAL 501 (830)
Q Consensus 471 p~d~~~~yG~~R~E~Laalv~ai~Ll~i~~~ 501 (830)
+...++..+..++|.+...+=+++++++++-
T Consensus 50 ~~~~~~~~~~~~lE~~WTiiP~iiLl~l~~p 80 (84)
T PF02790_consen 50 KFPNKFFNHNNKLEIIWTIIPAIILLFLAFP 80 (84)
T ss_dssp SSS--S---SHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhhhhHHHHHHHHHHHhh
Confidence 5556777888889999999999988877754
No 62
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=25.73 E-value=1.1e+03 Score=27.33 Aligned_cols=101 Identities=18% Similarity=0.064 Sum_probs=56.1
Q ss_pred HHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCCCchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhc
Q 046783 434 VAGFMSNSLGLISDACHMLFDCAALAIGLYASYIS-RLPANSQFNYGRGRFEVLSGYTNAVFLVLV-GALIVLESFERIL 511 (830)
Q Consensus 434 ~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al~~s-~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i-~~~Il~EsI~rLi 511 (830)
.+....|+..+.-|.+....=.....+.=+++-+- .|. |..++...++=..+..++.. .+.++.-+..+..
T Consensus 86 ~~al~~G~~~lvr~Si~gsIm~~~llv~GlslllGglr~-------~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~ 158 (368)
T COG0387 86 VAALKSGSPTLVRDSLYGSIMINLLLVVGLSLLLGGLRH-------KTQPFNPHGAGTYLALLFTAATIALVLPTFFPYT 158 (368)
T ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHcchhh-------ceeecchhhHHHHHHHHHHHHHHHhhhhhhhccc
Confidence 34556789999888877654444333333333222 222 22233333343444444433 4445555555555
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHhh
Q 046783 512 DPQEISTNSLLTVSIGGLLVNVIGLIFFHE 541 (830)
Q Consensus 512 ~p~~i~~~~ll~Vsi~gLivNlv~~~~~~~ 541 (830)
++++-+.+..+.++++.+++..+.+++--+
T Consensus 159 ~~~~~~~~~s~~~avv~i~~Y~lfL~fql~ 188 (368)
T COG0387 159 GGGNFSLGQSLFVAVVLIALYGLFLFFQLK 188 (368)
T ss_pred CCCcchHhHHHHHHHHHHHHHHHHHHhhhh
Confidence 566666666688888888888887766543
No 63
>COG2978 AbgT Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]
Probab=25.69 E-value=1e+03 Score=28.51 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHH
Q 046783 422 LLINTGYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYAS 465 (830)
Q Consensus 422 L~iNl~l~ivel~~G~lsgSlaLiADAlHsl~D~~s~~l~L~al 465 (830)
.++-++|.+..+++|..+|+.==--|-.+++.|.......++.+
T Consensus 313 ~~i~~~FlipGlvYG~vtgtik~~kDvv~~M~~~m~sMg~yiV~ 356 (516)
T COG2978 313 PFIFLLFLIPGLVYGRVTGTIKNDKDVVNMMAESMSSMGGYIVI 356 (516)
T ss_pred HHHHHHHHHhhhhhheeeeeeeccHHHHHHHHHHHHHhhhHHHH
Confidence 44557788999999999999998999999999998877666554
No 64
>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function. The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.
Probab=24.27 E-value=2.3e+02 Score=24.05 Aligned_cols=39 Identities=13% Similarity=0.371 Sum_probs=24.0
Q ss_pred EcCCeEEEEEEEEECCC--CCHHHHHHHHHHHHhcC-CCCeEEE
Q 046783 784 FTSTDVVGTLNLHVSSE--ADMVSIKAQVSHMLSDA-GIKDLTL 824 (830)
Q Consensus 784 l~~~~~V~svHV~V~~~--~~~~~I~~~V~~il~~~-gI~~vTI 824 (830)
+.++.+ ++.+.++.. .-.+.+++++++.++.. |+.+++|
T Consensus 31 i~~~~V--~v~l~l~~~~~~~~~~l~~~i~~~l~~l~gv~~V~V 72 (72)
T PF01883_consen 31 IEGGKV--SVSLELPTPACPAAEPLREEIREALKALPGVKSVKV 72 (72)
T ss_dssp ECTCEE--EEEE--SSTTHTTHHHHHHHHHHHHHTSTT-SEEEE
T ss_pred EECCEE--EEEEEECCCCchHHHHHHHHHHHHHHhCCCCceEeC
Confidence 345544 345555522 24678999999999976 8888765
No 65
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=23.64 E-value=3.1e+02 Score=22.27 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=29.1
Q ss_pred hHHHHHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCC-CHHHHHHHHHH
Q 046783 759 DLKETLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEA-DMVSIKAQVSH 812 (830)
Q Consensus 759 ~l~~i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~-~~~~I~~~V~~ 812 (830)
-.+.+.+.+.+++||.++. +.+..+ ++.|..+++. +.++|.+.|++
T Consensus 12 C~~~v~~~l~~~~GV~~v~----vd~~~~----~v~v~~~~~~~~~~~i~~~i~~ 58 (62)
T PF00403_consen 12 CAKKVEKALSKLPGVKSVK----VDLETK----TVTVTYDPDKTSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHHTSTTEEEEE----EETTTT----EEEEEESTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEE----EECCCC----EEEEEEecCCCCHHHHHHHHHH
Confidence 3456777888999996653 354544 3456666654 56677666655
No 66
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism]
Probab=23.38 E-value=90 Score=37.15 Aligned_cols=80 Identities=11% Similarity=0.162 Sum_probs=51.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHHHHhhhccccccccc------------
Q 046783 265 QLSQKQVRLISLFYTTVLLSVPALVSWIVFENYGDGDENSISFANLAWPLANTVVFGVLLSENYSDQK------------ 332 (830)
Q Consensus 265 ~~~~KRl~Al~~~~a~~~L~p~al~~~~~~~s~~~~~~~~~S~~~l~~~l~~ti~fgv~l~d~y~~~~------------ 332 (830)
+..-|| -++.+++.+++++||+++.. + +....+.+..-.++ .=++|||+.|+|.-+|
T Consensus 358 ~in~kr-g~liaA~ial~~~PW~l~~s---~------s~f~~~L~~yg~~L-gpiaGVmiaDyflirk~~~~v~~ly~~~ 426 (497)
T COG1953 358 YINIKR-GGLIAAIIALLICPWNLLES---S------SSFTTFLGSYGVFL-GPIAGVMIADYFLVRKGRLNLDELYTEP 426 (497)
T ss_pred ccchhh-hHHHHHHHHHHHcChHHHcC---c------cHHHHHHHHHHHHH-HHHHHHHHHHHHhhhcCccChHHhcCCC
Confidence 344455 78999999999999999874 1 12344555443444 4678999999876221
Q ss_pred --cccccchhhHHHHHHHHHHHHHH
Q 046783 333 --FVISADFQREFVVTLVCTIVLEL 355 (830)
Q Consensus 333 --l~~~~~~~~~~~~afl~alvL~~ 355 (830)
...++---+-.+++++|+.+...
T Consensus 427 G~y~y~~G~N~rA~~A~~~G~~~~l 451 (497)
T COG1953 427 GEYYYYGGWNWRAFAAYLCGVAPSL 451 (497)
T ss_pred CCeEEecCcCHHHHHHHHHhhhccc
Confidence 01112234556889999988764
No 67
>PF02038 ATP1G1_PLM_MAT8: ATP1G1/PLM/MAT8 family; InterPro: IPR000272 The FXYD protein family contains at least seven members in mammals []. Two other family members that are not obvious orthologs of any identified mammalian FXYD protein exist in zebrafish. All these proteins share a signature sequence of six conserved amino acids comprising the FXYD motif in the NH2-terminus, and two glycines and one serine residue in the transmembrane domain. FXYD proteins are widely distributed in mammalian tissues with prominent expression in tissues that perform fluid and solute transport or that are electrically excitable. Initial functional characterisation suggested that FXYD proteins act as channels or as modulators of ion channels however studies have revealed that most FXYD proteins have another specific function and act as tissue-specific regulatory subunits of the Na,K-ATPase. Each of these auxiliary subunits produces a distinct functional effect on the transport characteristics of the Na,K-ATPase that is adjusted to the specific functional demands of the tissue in which the FXYD protein is expressed. FXYD proteins appear to preferentially associate with Na,K-ATPase alpha1-beta isozymes, and affect their function in a way that render them operationally complementary or supplementary to coexisting isozymes.; GO: 0005216 ion channel activity, 0006811 ion transport, 0016020 membrane; PDB: 2JO1_A 2JP3_A 2ZXE_G 3A3Y_G 3N23_E 3B8E_H 3KDP_G 3N2F_E.
Probab=23.13 E-value=1.3e+02 Score=24.78 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=22.6
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046783 473 NSQFNYGRGRFEVLSGYTNAVFLVLVGALIVL 504 (830)
Q Consensus 473 d~~~~yG~~R~E~Laalv~ai~Ll~i~~~Il~ 504 (830)
++.|.|-|..+. +++++.+.+++++++.|+.
T Consensus 4 ~~pF~YDy~tLr-igGLi~A~vlfi~Gi~iil 34 (50)
T PF02038_consen 4 DDPFYYDYETLR-IGGLIFAGVLFILGILIIL 34 (50)
T ss_dssp CSGGGGCHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccchhHhh-ccchHHHHHHHHHHHHHHH
Confidence 456778888776 5777888878888876654
No 68
>COG2092 EFB1 Translation elongation factor EF-1beta [Translation, ribosomal structure and biogenesis]
Probab=22.83 E-value=3.5e+02 Score=24.95 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=48.2
Q ss_pred cccccchhhHHHHHHHHHcc--cCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHHhcC-CCCeEEE
Q 046783 751 RVSRAHELDLKETLNDVMKI--SGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVSHMLSDA-GIKDLTL 824 (830)
Q Consensus 751 ~~P~~~e~~l~~i~~~i~~i--~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il~~~-gI~~vTI 824 (830)
--|.+.+.++++..+++.++ +|+. +.....-.++-+....-+.+.+ ++.. .-.+++++.|.+. |++++.|
T Consensus 10 V~P~d~evdl~~L~~~ik~~l~~g~~-~~~~~~epIaFGLkal~l~vvv-~D~E--g~td~~ee~l~~vegV~svev 82 (88)
T COG2092 10 VMPDDPEVDLEELEEKIKEKLPEGYE-LIKIEEEPIAFGLKALKLYVVV-EDKE--GGTDALEEALEEVEGVESVEV 82 (88)
T ss_pred ecCCCCCCCHHHHHHHHHHhccccce-eccceeEeeeeeeeeEEEEEEE-cccc--cCcHHHHHHHhhccCcceEEE
Confidence 35766778888888888765 6774 4477778888887776777777 3332 2456677777764 7776544
No 69
>PRK09577 multidrug efflux protein; Reviewed
Probab=21.51 E-value=2.4e+02 Score=36.71 Aligned_cols=58 Identities=12% Similarity=0.095 Sum_probs=30.6
Q ss_pred ccccchhhHHH-HHHHHHcccCcceeeEEEEEEEcCCeEEEEEEEEECCCCCHHHHHHHHHHHHh
Q 046783 752 VSRAHELDLKE-TLNDVMKISGVHGIQNLHLWSFTSTDVVGTLNLHVSSEADMVSIKAQVSHMLS 815 (830)
Q Consensus 752 ~P~~~e~~l~~-i~~~i~~i~GV~~V~dlhiW~l~~~~~V~svHV~V~~~~~~~~I~~~V~~il~ 815 (830)
+|+++|+.+-+ +.+.+..++||+ +++.-. .++ .+.+.++++.+.|.+....+|++.+.
T Consensus 53 sp~~VE~~Vt~plE~~L~~v~gv~---~i~S~S-~~G--~s~I~v~f~~g~d~~~a~~~V~~~v~ 111 (1032)
T PRK09577 53 SAQVVEESVTALIEREMNGAPGLL---YTSATS-SAG--QASLSLTFKQGVNADLAAVEVQNRLK 111 (1032)
T ss_pred CHHHHHHHHHHHHHHHhcCCCCce---EEEEEe-cCC--eEEEEEEEECCCChHHHHHHHHHHHH
Confidence 44444443333 333455556664 444333 233 35788888888876655455544443
No 70
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=21.37 E-value=1e+02 Score=28.80 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 046783 460 IGLYASYISRLPANSQFNYGRGRFEVLSGYTNAVFLVLV 498 (830)
Q Consensus 460 l~L~al~~s~~p~d~~~~yG~~R~E~Laalv~ai~Ll~i 498 (830)
..++|...-.|| ||+|.|+..+++.++++.++
T Consensus 66 ~~li~~~~GmRP-------GYGr~E~~iG~iiA~l~~~l 97 (99)
T PF09877_consen 66 AFLIGFPLGMRP-------GYGRIETVIGLIIALLIYLL 97 (99)
T ss_pred HHHHhhhccCCC-------CCCeehhhhhHHHHHHHHHH
Confidence 334445555555 79999999999988877654
No 71
>cd00292 EF1B Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl tRNA to the ribosome. The guanine nucleotide exchange domain of EF1B, which is the alpha subunit in yeast, is responsible for the catalysis of this exchange reaction.
Probab=20.25 E-value=6.6e+02 Score=22.99 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=46.1
Q ss_pred hcccccchhhHHHHHHHHHcc--cCcceeeEEEEEEEcCCeEEEEEEEEECCC-CCHHHHHHHHHHHHhcCCCCeEEEE
Q 046783 750 QRVSRAHELDLKETLNDVMKI--SGVHGIQNLHLWSFTSTDVVGTLNLHVSSE-ADMVSIKAQVSHMLSDAGIKDLTLQ 825 (830)
Q Consensus 750 q~~P~~~e~~l~~i~~~i~~i--~GV~~V~dlhiW~l~~~~~V~svHV~V~~~-~~~~~I~~~V~~il~~~gI~~vTIQ 825 (830)
+--|.+.+.|++++.+.+.++ +|. .+.....-.++-+-...-+.+.+..+ -..+++.+++++ ..||+++.|.
T Consensus 9 ~V~P~~~e~Dl~~l~~~Ik~~~~~gl-~~~~~~~epiaFGlk~L~i~~vv~D~~~~td~lee~i~~---~d~VqsveI~ 83 (88)
T cd00292 9 KVKPWDDEVDLDELEEKIRAILMDGL-LWGKSKLEPIAFGLKALQIYCVVEDDEGGTDELEEAISE---EDGVQSVDVE 83 (88)
T ss_pred EEecCCCCcCHHHHHHHHHHhCcCCc-EEEEEEEEEeeeEeeEEEEEEEEEeCCcCcHHHHHHHhc---cCCceEEEEE
Confidence 445766678888888888765 444 56677777777776665666666443 334555555444 4478777653
Done!